BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011615
(481 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|411101510|gb|AFW04075.1| polygalacturonase [Litchi chinensis]
Length = 481
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/477 (76%), Positives = 414/477 (86%), Gaps = 7/477 (1%)
Query: 1 MEF-CLKSRNNILHPHVIKILSTLLTLGLLSP--QVAECRPTKNSYTIEFQALNCRKHSA 57
ME+ CLKSRN+ HVI++ +TL+ LGLL QVAECR + +EF ALNCRKHSA
Sbjct: 1 MEYLCLKSRNS----HVIEMSTTLILLGLLVLSLQVAECRSKQPLGNLEFLALNCRKHSA 56
Query: 58 VLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
VLTDFGGVGDGKTSNTKAF +AI LSK A+DGGA L+VPPGKWLTGSFNLTSHFTLYIH
Sbjct: 57 VLTDFGGVGDGKTSNTKAFRSAIDKLSKLASDGGAALVVPPGKWLTGSFNLTSHFTLYIH 116
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
KDA+LL SQ ESEWP LP LPSYGRGRD GGR SSLIFGTNLTDVVVTG N TI+GQG
Sbjct: 117 KDAVLLGSQVESEWPRLPVLPSYGRGRDAAGGRLSSLIFGTNLTDVVVTGANGTIDGQGA 176
Query: 178 PWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAP 237
WW K++K Q +VTRPYLIE+M+S+ VQISNLT ++SPSWNVHP+YSSNV+IQGLTI AP
Sbjct: 177 YWWGKFKKNQLDVTRPYLIEIMYSNQVQISNLTFVNSPSWNVHPIYSSNVIIQGLTILAP 236
Query: 238 IDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
+DSPNTDGI+PDSCT+ RIED YIVSGDDC+AVKSGWD+YGIKVGMPTQ L+IRR+ CIS
Sbjct: 237 VDSPNTDGIDPDSCTDIRIEDCYIVSGDDCIAVKSGWDQYGIKVGMPTQRLVIRRVTCIS 296
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
PDSA IALGSEMSGGI+DVRAEDITAI+TQSGVRIKT VGRG YVK+IYVRRMTMKTMKY
Sbjct: 297 PDSATIALGSEMSGGIRDVRAEDITAIDTQSGVRIKTGVGRGGYVKDIYVRRMTMKTMKY 356
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
VFWMTG YG HPDPGFDPKALP + GINYRDMVA+NVT SA+LDGI NDPF GICI NVT
Sbjct: 357 VFWMTGSYGQHPDPGFDPKALPDIHGINYRDMVAENVTYSARLDGIPNDPFKGICIFNVT 416
Query: 418 IKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTDCFFPDDKLPIDDVRLNTC 474
I LT+KPKELQWNCT++QG+TSRVTP AC LLP+K+P DC FP D+LP++D++L C
Sbjct: 417 ITLTKKPKELQWNCTDVQGVTSRVTPPACSLLPEKKPVDCPFPADRLPVEDLKLKRC 473
>gi|356535839|ref|XP_003536450.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/475 (73%), Positives = 410/475 (86%), Gaps = 4/475 (0%)
Query: 1 MEFCLKSRNNILHPHVIKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLT 60
ME C + +N+ +VI ++S +L LG L+ +VA+CR IE+ A+NCRKHSAVLT
Sbjct: 1 MEICPRIQNS----YVIGVISLVLMLGSLNVKVAQCRVASKLVNIEYPAINCRKHSAVLT 56
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDA 120
DFGGVGDGKTSNTKAF +AIS LS+ A+DGGAQLIVPPGKWLTGSFNLTSHFTL++HKDA
Sbjct: 57 DFGGVGDGKTSNTKAFQSAISKLSRVASDGGAQLIVPPGKWLTGSFNLTSHFTLFLHKDA 116
Query: 121 LLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW 180
++LASQDESEWP LP LPSYGRGRD PGGRFSSLIFGT+LTDVV+TG N TI+GQG WW
Sbjct: 117 VILASQDESEWPQLPVLPSYGRGRDAPGGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWW 176
Query: 181 IKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDS 240
K+ K Q N+TRPY+IE+M+SD +QISNLTL++SPSW VHP+YSSN+ I+GLTI AP+DS
Sbjct: 177 DKFHKNQLNLTRPYMIEIMYSDQIQISNLTLVNSPSWFVHPIYSSNITIKGLTILAPVDS 236
Query: 241 PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS 300
PNTDGI+PDSCTNTRIED YIVSGDDCVAVKSGWDEYGIK G PTQHL+IRRL CISPDS
Sbjct: 237 PNTDGIDPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISPDS 296
Query: 301 AAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFW 360
A IALGSEMSGGI+DVR EDITAINTQS VRIKTAVGRG YVK+I+V+ MT+ TMKYVFW
Sbjct: 297 AMIALGSEMSGGIQDVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMTLSTMKYVFW 356
Query: 361 MTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKL 420
MTG YGSHPDP FDPKALP +TGINYRD+VA NVT SAKL+GI NDPFTGICISNV+I++
Sbjct: 357 MTGSYGSHPDPAFDPKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGICISNVSIQV 416
Query: 421 TEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTDCFFPDDKLPIDDVRLNTCS 475
+E+ K+LQWNCT++ G+TS VTP C+LLP+K DC FP+DKL I++V+L TCS
Sbjct: 417 SEQKKKLQWNCTDVAGVTSNVTPNTCQLLPEKGKFDCPFPNDKLSIENVQLKTCS 471
>gi|356534105|ref|XP_003535598.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 475
Score = 733 bits (1891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/464 (73%), Positives = 398/464 (85%)
Query: 12 LHPHVIKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTS 71
L VI +S +L LG L+ +V EC+ + E+ A+NCRKHSAVLTDFGGVGDGKTS
Sbjct: 7 LCSQVIGAISLVLILGSLNVKVVECKVGRGLKNTEYYAINCRKHSAVLTDFGGVGDGKTS 66
Query: 72 NTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEW 131
NTKAF +AI L +YA+DGGAQLIVPPGKWLTG FNLTSHFTL++HKDA++LASQ ESEW
Sbjct: 67 NTKAFQSAIRKLGQYASDGGAQLIVPPGKWLTGPFNLTSHFTLFLHKDAVILASQVESEW 126
Query: 132 PLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVT 191
P LP LPSYGRGRD PGGRFSSLIFGT+LTDVV+TG N TI+GQG WW K+ K Q N+T
Sbjct: 127 PQLPVLPSYGRGRDAPGGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKNQLNLT 186
Query: 192 RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSC 251
RPY+IE+M+SD +QISNLTL++SPSW VHP+YSSN+ I+GLTI AP+DSPNTDGI+PDSC
Sbjct: 187 RPYMIEIMYSDQIQISNLTLVNSPSWFVHPIYSSNITIKGLTILAPVDSPNTDGIDPDSC 246
Query: 252 TNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSG 311
TNTRIED YIVSGDDCVAVKSGWDEYGIK G PTQHL+IRRL CISPDSA IALGSEMSG
Sbjct: 247 TNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISPDSAMIALGSEMSG 306
Query: 312 GIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDP 371
GI+DVR EDITAINTQS VRIKTAVGRG YVK+I+V+ MT+ TMKYVFWMTG YGSHPDP
Sbjct: 307 GIQDVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMTLSTMKYVFWMTGSYGSHPDP 366
Query: 372 GFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNC 431
FDPKALP +TGINYRD+VA NVT SAKL+GI NDPFTGICISNV+I+++E+ K+LQWNC
Sbjct: 367 AFDPKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGICISNVSIQVSEQKKKLQWNC 426
Query: 432 TNIQGITSRVTPQACELLPKKEPTDCFFPDDKLPIDDVRLNTCS 475
T++ G+TS VTP C+LLP+K DC FP+DKL I++V+L TCS
Sbjct: 427 TDVAGVTSNVTPNTCQLLPEKGKFDCPFPNDKLSIENVQLKTCS 470
>gi|255545184|ref|XP_002513653.1| polygalacturonase, putative [Ricinus communis]
gi|223547561|gb|EEF49056.1| polygalacturonase, putative [Ricinus communis]
Length = 473
Score = 731 bits (1888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/463 (73%), Positives = 397/463 (85%), Gaps = 1/463 (0%)
Query: 15 HVIKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTK 74
++ K++ +L LG L ++ ECR K S TI + A++CRKHSAVLTDFGGVGDGKTSNTK
Sbjct: 11 YIFKVIPVVLILGSLGSRLGECRNVKISNTISYSAISCRKHSAVLTDFGGVGDGKTSNTK 70
Query: 75 AFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLL 134
F TAI+NLSKY+ DGGAQLI+P GKWLTGSFNLTSHFTL++HK+A+LLASQDE+EWP+L
Sbjct: 71 VFQTAIANLSKYSPDGGAQLIIPAGKWLTGSFNLTSHFTLFLHKEAVLLASQDEAEWPIL 130
Query: 135 PPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPY 194
PPLPSYGRGRD GGRFSSLIFGTNL DVV+TG N TI+GQG WW K+ K N TRPY
Sbjct: 131 PPLPSYGRGRDATGGRFSSLIFGTNLKDVVITGNNGTIDGQGATWWNKFHKGLLNQTRPY 190
Query: 195 LIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNT 254
LIE+++S +QISNL LI+SPSWNVHP YSSNVLIQGLTI AP+DSPNTDGINPDSCTNT
Sbjct: 191 LIELLYSHKIQISNLILINSPSWNVHPTYSSNVLIQGLTILAPVDSPNTDGINPDSCTNT 250
Query: 255 RIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIK 314
RIED YIVSGDDC+AVKSGWD+YGIK GMPT+ L+IRRL CISPDSA IALGSEMSGGI+
Sbjct: 251 RIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTKKLVIRRLTCISPDSATIALGSEMSGGIQ 310
Query: 315 DVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFD 374
DVRAEDITAINTQSG+RIKTA GRGAYVK+I+VRRM KTMKYVFWMTG YGSHPD G+D
Sbjct: 311 DVRAEDITAINTQSGIRIKTAAGRGAYVKDIFVRRMNFKTMKYVFWMTGSYGSHPDKGYD 370
Query: 375 PKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNI 434
P ALP +T INYRD+VA+NVT SA+L+GI DPFTGICISN I LT+KP++LQWNCT+I
Sbjct: 371 PNALPIITRINYRDIVAENVTYSARLEGIEKDPFTGICISNANITLTKKPEKLQWNCTDI 430
Query: 435 QGITSRVTPQACELLPKKEPTDCFFPDDKLPIDDVRLNTCSAS 477
+G+TS V P+ C LLP K +C FP D+LPI++V+L TCSA+
Sbjct: 431 EGVTSNVNPRPCSLLPGKR-LECPFPKDRLPIENVKLKTCSAA 472
>gi|224134791|ref|XP_002327490.1| predicted protein [Populus trichocarpa]
gi|222836044|gb|EEE74465.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/459 (73%), Positives = 395/459 (86%), Gaps = 8/459 (1%)
Query: 19 ILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNT 78
++S L LG L +A + E+QA+NCRKHSAVLTDFGGVGDGKTSNTKAF
Sbjct: 1 MISIFLILGSLVSTLAGA-------STEYQAINCRKHSAVLTDFGGVGDGKTSNTKAFKA 53
Query: 79 AISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLP 138
AI+ LS+YA+DGGAQLIVPPGKWLTGSFNL+SHFTL++HKDA+LLASQDE+EWP PPLP
Sbjct: 54 AIAELSQYASDGGAQLIVPPGKWLTGSFNLSSHFTLFLHKDAVLLASQDEAEWPAFPPLP 113
Query: 139 SYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEV 198
SYG GRDE GRFSSLIFGT+LTDVVVTG N TI+GQG WW K+ +K+ +TRPYLIE
Sbjct: 114 SYGVGRDEHAGRFSSLIFGTHLTDVVVTGNNGTIDGQGAVWWDKFHQKKLKLTRPYLIEF 173
Query: 199 MFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIED 258
++SD VQISNLTLI+SPSWNVHP Y SNVLIQ LTI AP+DSPNTDGINPDS +N RIED
Sbjct: 174 LYSDQVQISNLTLINSPSWNVHPTYCSNVLIQWLTILAPVDSPNTDGINPDSSSNVRIED 233
Query: 259 NYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRA 318
+++VSGDDC+AVKSGWDEYGIK G PTQHL+IRR CISPDSA IALGSEMSGGI+DVRA
Sbjct: 234 SFVVSGDDCIAVKSGWDEYGIKFGRPTQHLVIRRFTCISPDSATIALGSEMSGGIQDVRA 293
Query: 319 EDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKAL 378
EDITA++TQSGVRIKTAVGRGAYVK+I+VRRMT+KTMKY FWMTG YGSHPD G+DPKAL
Sbjct: 294 EDITALSTQSGVRIKTAVGRGAYVKDIFVRRMTLKTMKYAFWMTGSYGSHPDTGYDPKAL 353
Query: 379 PTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGIT 438
P + GI+Y+D+VA+NVT SA+L+GI NDPFTGICISNV I LT+KPKELQWNCT+IQG++
Sbjct: 354 PEIKGISYKDIVAENVTYSARLEGIENDPFTGICISNVNISLTQKPKELQWNCTDIQGVS 413
Query: 439 SRVTPQACELLPKKEPTDCFFPDDKLPIDDVRLNTCSAS 477
S+VTPQ C L +K +C FP+D+LPI+DV+L TCSA+
Sbjct: 414 SKVTPQPCAALLEKS-IECPFPEDRLPIEDVKLQTCSAT 451
>gi|356530824|ref|XP_003533980.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 709 bits (1830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/475 (71%), Positives = 397/475 (83%), Gaps = 6/475 (1%)
Query: 1 MEFCLKSRNNILHPHVIKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLT 60
M+ C K N+ V+ ++ T+L LGL +V ECR E+ A++CRKHSAVLT
Sbjct: 1 MKTCPKLSNSC----VVGVIFTVLLLGLQGVRVVECRVANGLDCFEYPAISCRKHSAVLT 56
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDA 120
DFGGVGDGKTSNTKAF AISNLS YA+DGGA L+VPPGKWLTGSFNLTSHFTL++ K+A
Sbjct: 57 DFGGVGDGKTSNTKAFQYAISNLSHYASDGGALLVVPPGKWLTGSFNLTSHFTLFLQKEA 116
Query: 121 LLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW 180
+L SQDESEWP LP LPSYGRGRD P GRFSSLIFGTNLTDVV+TG N TI+GQG WW
Sbjct: 117 TILGSQDESEWPTLPVLPSYGRGRDAPDGRFSSLIFGTNLTDVVITGYNGTIDGQGSYWW 176
Query: 181 IKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDS 240
K+ K + +TRPY+IE+MFSD++QISNLTLIDSPSW VHP+YSS+++IQGLTI AP+DS
Sbjct: 177 DKFHKGELKLTRPYMIEIMFSDHIQISNLTLIDSPSWFVHPIYSSDIIIQGLTILAPVDS 236
Query: 241 PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS 300
PNTDGINPDSC+NTRIED YIVSGDDCVA+KSGWDE GIK GMP+QH+IIRRL C+SPDS
Sbjct: 237 PNTDGINPDSCSNTRIEDCYIVSGDDCVAIKSGWDESGIKFGMPSQHIIIRRLECVSPDS 296
Query: 301 AAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFW 360
A IALGSEMSGGI+DVRAE++TA+NTQS VRIKTAVGRGAYV++I+V+ M + TMKYVFW
Sbjct: 297 AMIALGSEMSGGIRDVRAEELTALNTQSAVRIKTAVGRGAYVRDIFVKGMNLNTMKYVFW 356
Query: 361 MTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKL 420
MTG YGSHP+ FDPKALP +TGINYRD++ADNVT SA+L+GI NDPFTGICISNVTI
Sbjct: 357 MTGSYGSHPNTDFDPKALPNITGINYRDVIADNVTYSARLEGIANDPFTGICISNVTIH- 415
Query: 421 TEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTDCFFPDDKLPIDDVRLNTCS 475
K+ QWNCT+I+G+TS V P+ CELLP KE +C +PDDKLPI+ V+L TCS
Sbjct: 416 -SGKKKPQWNCTDIEGVTSNVYPKPCELLPLKEKIECPYPDDKLPIESVQLKTCS 469
>gi|225464581|ref|XP_002273669.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 478
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/481 (72%), Positives = 403/481 (83%), Gaps = 8/481 (1%)
Query: 1 MEFCLKSRNNILHPHVIKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLT 60
MEFCL SR PH + I+ +L LGLLS +VAEC+ + I+++AL CRKHSAVLT
Sbjct: 1 MEFCLNSRK----PHALGIVLAVLILGLLSFRVAECQTSSFMEPIKYKALRCRKHSAVLT 56
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDA 120
DFG GDGKT NTKAF +AI +LS++A DGGA+LIVPPGKWLTGSFNLTSHFTLYI KDA
Sbjct: 57 DFGATGDGKTINTKAFKSAIDHLSQFADDGGAELIVPPGKWLTGSFNLTSHFTLYIDKDA 116
Query: 121 LLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW 180
++L +QDES +PL+ LPSYG GRD GGR SSLIFGTNLTDVV+TGGN T+NGQG+ WW
Sbjct: 117 VILGAQDESAYPLIEVLPSYGVGRDG-GGRHSSLIFGTNLTDVVITGGNGTLNGQGKYWW 175
Query: 181 IKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDS 240
K+R K++N TRPYLIE+M+S++VQISNLTLIDSPSWNVHPVYS NVL++ LTI APIDS
Sbjct: 176 DKFRAKKYNDTRPYLIEIMYSNHVQISNLTLIDSPSWNVHPVYSRNVLVKDLTILAPIDS 235
Query: 241 PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS 300
PNTDGINPDSC RIED +IVSGDDC+AVKSGWD+YG K GMPT+ L+IRRL CISPDS
Sbjct: 236 PNTDGINPDSCKKVRIEDCFIVSGDDCIAVKSGWDQYGYKFGMPTKDLLIRRLTCISPDS 295
Query: 301 AAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFW 360
A IALGSEMSGGIK+V AEDITAI+TQSG+RIKT +GRG YVK+IYVRRMT+KTMKYVFW
Sbjct: 296 ATIALGSEMSGGIKNVWAEDITAIDTQSGIRIKTGIGRGGYVKDIYVRRMTVKTMKYVFW 355
Query: 361 MTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKL 420
+TGDYGSHPD G+DPKALP + INYRDMVA+NVT SA+LDGI DPFTGICISNVTI L
Sbjct: 356 ITGDYGSHPDDGWDPKALPVIKNINYRDMVAENVTYSARLDGISGDPFTGICISNVTIGL 415
Query: 421 TEKPKELQWNCTNIQGITSRVTPQACELLPKKEPT-DCFFPDDKLPIDDVRLNTCSASIS 479
TEKPKELQWNCTN+ G+TS+VTP++C+LLP + +C FPD P DV+L TCS S
Sbjct: 416 TEKPKELQWNCTNVAGVTSQVTPRSCDLLPPSDKVFNCPFPDH--PHWDVKLKTCSHIGS 473
Query: 480 K 480
K
Sbjct: 474 K 474
>gi|358248902|ref|NP_001240215.1| uncharacterized protein LOC100785005 precursor [Glycine max]
gi|255635243|gb|ACU17976.1| unknown [Glycine max]
Length = 477
Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/476 (69%), Positives = 397/476 (83%), Gaps = 7/476 (1%)
Query: 1 MEFCLKSRNNILHPHVIKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLT 60
M+ C K N+ V+ ++ T+L LGL +V ECR E+ A++CRKHSAVLT
Sbjct: 1 MKPCPKLSNSC----VVGVIYTVLLLGLQGVRVVECRVANGLDCFEYPAISCRKHSAVLT 56
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDA 120
DFGGVGDGKTSNTKAF AISNLS YA+DGGA L+VPPGKWLTGSFNLTSHFTL++ K+A
Sbjct: 57 DFGGVGDGKTSNTKAFQYAISNLSHYASDGGALLVVPPGKWLTGSFNLTSHFTLFLQKEA 116
Query: 121 LLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW 180
+L SQDESEWP LP LPSYGRGRD P GRFSSLIFGTNLTDV++TG N TI+GQG WW
Sbjct: 117 TILGSQDESEWPTLPVLPSYGRGRDAPDGRFSSLIFGTNLTDVIITGYNGTIDGQGCYWW 176
Query: 181 IKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDS 240
K+ K + +TRPY+IE+MFSD++QISNLTLI+SPSW VHP+Y+S+++IQGLTI AP+DS
Sbjct: 177 DKFHKGELKLTRPYMIEIMFSDHIQISNLTLINSPSWFVHPIYTSDIIIQGLTILAPVDS 236
Query: 241 PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS 300
PNTDGI+PDSC+N RIED YIVSGDDCVA+KSGWDEYGIK GMP+QH+IIRRL C+SPDS
Sbjct: 237 PNTDGIDPDSCSNIRIEDCYIVSGDDCVAIKSGWDEYGIKFGMPSQHIIIRRLECVSPDS 296
Query: 301 AAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFW 360
A IALGSEMSGGI+DVRAED+TAINTQS VRIKTAVGRGAYV++I+++ M + TMKYVFW
Sbjct: 297 AMIALGSEMSGGIQDVRAEDLTAINTQSAVRIKTAVGRGAYVRDIFIKGMNLNTMKYVFW 356
Query: 361 MTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKL 420
MTG Y SHPD GFDPK LP +TGINYRD++A+NVT SA+L+GI NDPFTGICISNVTI
Sbjct: 357 MTGSYSSHPDNGFDPKTLPNITGINYRDVIAENVTYSARLEGIANDPFTGICISNVTIH- 415
Query: 421 TEKPKELQWNCTNIQGITSRVTPQACELLP-KKEPTDCFFPDDKLPIDDVRLNTCS 475
K+LQWNCT+I+G+TS V P+ CELLP K+E +C +PDDK+ I+ V+L TCS
Sbjct: 416 -SGKKKLQWNCTDIEGVTSNVYPKPCELLPLKQEKIECPYPDDKVSIESVQLKTCS 470
>gi|357443847|ref|XP_003592201.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481249|gb|AES62452.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 478
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/463 (69%), Positives = 387/463 (83%), Gaps = 7/463 (1%)
Query: 15 HVIKILSTLLTLGLLSPQVAECR--PTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSN 72
+VI ++S +L LG L AECR + ++ A+NCRKHSAVLTDFG VGDGKT N
Sbjct: 15 YVIGVISVVLILGSL----AECRVPSSIKLNNFDYPAINCRKHSAVLTDFGAVGDGKTLN 70
Query: 73 TKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWP 132
TKAFN AI+NLS+YA DGGAQLIVPPGKWLTGSFNLTSHFTL++ KDA++L SQDESEWP
Sbjct: 71 TKAFNAAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKDAVILGSQDESEWP 130
Query: 133 LLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTR 192
L LPSYGRGRD P GRFSSLIFGTNLTDV++TG N TI+GQG WW K+ KKQ +TR
Sbjct: 131 QLLVLPSYGRGRDAPAGRFSSLIFGTNLTDVIITGDNGTIDGQGSYWWDKFHKKQLTLTR 190
Query: 193 PYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCT 252
PY+IE+M+SD +QISNLTLI+SP+W VHP+YSSN++I GLTI AP+DSPNTDGINPDSCT
Sbjct: 191 PYMIEIMYSDQIQISNLTLINSPTWFVHPIYSSNIIINGLTILAPVDSPNTDGINPDSCT 250
Query: 253 NTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGG 312
N RIEDN+IVSGDDC+A+KSGWDEYGIKVGMP+Q +IIRRL CISPDSA +ALGSEMSGG
Sbjct: 251 NVRIEDNFIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRRLTCISPDSAMVALGSEMSGG 310
Query: 313 IKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPG 372
I+DVR ED+TAINT+S +RIK+AVGRGA+VK+I+V+ M + TMKYVFWMTG YG HPD G
Sbjct: 311 IQDVRIEDVTAINTESAIRIKSAVGRGAFVKDIFVKGMDLNTMKYVFWMTGSYGDHPDNG 370
Query: 373 FDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCT 432
FDP ALP ++GINYRD+ A NVT + KL+GI NDPFTGIC+SNVTI+++ K+L WNCT
Sbjct: 371 FDPNALPKISGINYRDVTAKNVTIAGKLEGISNDPFTGICVSNVTIEMSAHKKKLPWNCT 430
Query: 433 NIQGITSRVTPQACELLPKKEPTDCFFPDDKLPIDDVRLNTCS 475
+I G+TS V P+ CELL +KE +C FP DKL I++V+ TC+
Sbjct: 431 DISGVTSNVVPKPCELLQEKE-IECPFPTDKLAIENVQFKTCN 472
>gi|356520375|ref|XP_003528838.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 482
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/485 (68%), Positives = 393/485 (81%), Gaps = 7/485 (1%)
Query: 1 MEFCLKSRNNILHPHVIKILSTLLTLGLLSPQVAECRPTKNSYT-IEFQALNCRKHSAVL 59
ME K + VI+++ +L + LLS +VAE R K T +++A+NCR HSA L
Sbjct: 1 MELLWKDHMRV---QVIRLVCAVLLVTLLSSEVAESRKVKTVGTSFKYEAINCRTHSASL 57
Query: 60 TDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKD 119
TDFGGVGDGKTSNTKAF +AIS+LS+YA+ GGAQL VP GKWLTGSF+L SHFTLY++KD
Sbjct: 58 TDFGGVGDGKTSNTKAFQSAISHLSQYASKGGAQLYVPAGKWLTGSFSLISHFTLYLNKD 117
Query: 120 ALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPW 179
A+LLASQD SEWP + PLPSYGRGRD P GR++SLIFGTNLTDV+VTGGN TI+GQG W
Sbjct: 118 AVLLASQDISEWPAIEPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGGNGTIDGQGAFW 177
Query: 180 WIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPID 239
W K+ KK+ TRPYLIE+MFSD +QISNLTL++SPSWN+HPVYSSN++I+GLTI AP+
Sbjct: 178 WQKFHKKKLKYTRPYLIELMFSDQIQISNLTLLNSPSWNLHPVYSSNIIIKGLTIIAPVP 237
Query: 240 SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPD 299
SPNTDGINPDSCTNTRIED YIVSGDDCVAVKSGWDEYGIK G PT+ L+IRRL CISP
Sbjct: 238 SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPQ 297
Query: 300 SAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVF 359
SAAIALGSEMSGGI+DVRAEDITAI+T+SGVRIKTAVGRG YVK+IYV+RMTM TMK+VF
Sbjct: 298 SAAIALGSEMSGGIQDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWVF 357
Query: 360 WMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
WMTG+YGSH D +DPKALP + GINYRD+VADNVT +A+L+GI NDPFTGICI+NVTI
Sbjct: 358 WMTGNYGSHADSHYDPKALPEINGINYRDVVADNVTMAARLEGISNDPFTGICIANVTIG 417
Query: 420 LTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTD---CFFPDDKLPIDDVRLNTCSA 476
+ K K+ W CT+I+GITS VTP+ C LP + P C FP LPID + L C+
Sbjct: 418 MAAKAKKQPWTCTDIEGITSGVTPKPCNSLPDQGPEKIKACDFPQGNLPIDMLELKKCAY 477
Query: 477 SISKA 481
+ A
Sbjct: 478 IMKHA 482
>gi|15229058|ref|NP_190464.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|6522571|emb|CAB62015.1| endo-polygalacturonase-like protein [Arabidopsis thaliana]
gi|67633678|gb|AAY78763.1| glycoside hydrolase family 28 protein [Arabidopsis thaliana]
gi|332644955|gb|AEE78476.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 469
Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/459 (70%), Positives = 378/459 (82%), Gaps = 7/459 (1%)
Query: 23 LLTLGLLSPQVAECRPTKNSYT--IEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAI 80
L+ L + E R +NS T IEF ALNCRKHSA+LTDFG VGDGKTSNTKAF AI
Sbjct: 9 LVFLAIFLFPAIESRSHRNSVTSKIEFSALNCRKHSAILTDFGAVGDGKTSNTKAFRNAI 68
Query: 81 SNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSY 140
S LS+ A DGGAQL+VPPGKWLTGSFNLTSHFTL+I + A +LASQDESEWP++ PLPSY
Sbjct: 69 SKLSQMATDGGAQLVVPPGKWLTGSFNLTSHFTLFIQRGATILASQDESEWPVIAPLPSY 128
Query: 141 GRGRDEPG-GRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVM 199
G+GRD G GRF+SLI GTNLTDVV+TG N TINGQG+ WW K++KKQF +TRPYLIE++
Sbjct: 129 GKGRDGTGTGRFNSLISGTNLTDVVITGNNGTINGQGQYWWDKFKKKQFKITRPYLIEIL 188
Query: 200 FSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDN 259
FS N+QISN+TLIDSPSWN+HPVY ++V+++ +T+ AP+ PNTDGINPDSCTNT IED
Sbjct: 189 FSKNIQISNITLIDSPSWNIHPVYCNSVIVKSVTVLAPVTVPNTDGINPDSCTNTLIEDC 248
Query: 260 YIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAE 319
YIVSGDDC+AVKSGWD+YGIK GMPTQ L IRRL CISP SA +ALGSEMSGGIKDVR E
Sbjct: 249 YIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCISPKSAGVALGSEMSGGIKDVRIE 308
Query: 320 DITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALP 379
D+T NT+S +RIKTAVGRGAYVK+IY RR+TMKTMKYVFWM+G+YGSHPD GFDPKALP
Sbjct: 309 DVTLTNTESAIRIKTAVGRGAYVKDIYARRITMKTMKYVFWMSGNYGSHPDEGFDPKALP 368
Query: 380 TVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITS 439
+T INYRDM A+NVT SA LDGI DPFTGICISNVTI L K K++QWNCT++ G+TS
Sbjct: 369 EITNINYRDMTAENVTMSASLDGIDKDPFTGICISNVTIALAAKAKKMQWNCTDVAGVTS 428
Query: 440 RVTPQACELLPKKEP----TDCFFPDDKLPIDDVRLNTC 474
RVTP+ C LLP+K+ DC FP D +PI+ V L C
Sbjct: 429 RVTPEPCSLLPEKKAQAKNVDCAFPSDLIPIESVVLKKC 467
>gi|359490611|ref|XP_002273143.2| PREDICTED: probable polygalacturonase-like, partial [Vitis
vinifera]
Length = 432
Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/430 (74%), Positives = 379/430 (88%), Gaps = 2/430 (0%)
Query: 52 CRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSH 111
CRKHSA+LT+FGG+GDGKTSNTKAF TAI +L ++A DGGA+LIVPPGKWLTGSFNLTSH
Sbjct: 1 CRKHSALLTEFGGIGDGKTSNTKAFKTAIDHLKQFATDGGAELIVPPGKWLTGSFNLTSH 60
Query: 112 FTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNAT 171
FTLYIHKDA++L SQ+ES++P +PPLPSYG+GRD GGRFSSLIFGTNLTDVV+ GGN T
Sbjct: 61 FTLYIHKDAVILGSQEESDYPHIPPLPSYGKGRDG-GGRFSSLIFGTNLTDVVIIGGNGT 119
Query: 172 INGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQG 231
INGQG WW K+++K+ TRPYLIE+MFSD VQISNLTLIDSPSWNVHPVY S+V+IQG
Sbjct: 120 INGQGRVWWDKFKQKKLVDTRPYLIEIMFSDQVQISNLTLIDSPSWNVHPVYCSDVIIQG 179
Query: 232 LTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIR 291
+TI AP+D PNTDGINPDSC N +IED YIVSGDDC+AVKSGWD+YGIK G+PT+ ++IR
Sbjct: 180 MTILAPVDVPNTDGINPDSCANVKIEDCYIVSGDDCIAVKSGWDQYGIKYGVPTRDIVIR 239
Query: 292 RLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMT 351
RL CISPDSA IALGSEMSGGIK+VRAEDITAIN+QSGVRIKT VGRG YV++IY R+MT
Sbjct: 240 RLTCISPDSAVIALGSEMSGGIKNVRAEDITAINSQSGVRIKTGVGRGGYVQDIYARKMT 299
Query: 352 MKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGI 411
MKTMKYVFWMT DYGSHPD +D KA+P + INYR++VA+NVT SA+LDGI D FTGI
Sbjct: 300 MKTMKYVFWMTSDYGSHPDDEWDRKAIPKIENINYREVVAENVTYSARLDGIAGDKFTGI 359
Query: 412 CISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL-PKKEPTDCFFPDDKLPIDDVR 470
CIS+VTI+LT+KPK+LQWNCTN++G+TS+VTPQ+C+LL P K P C FP+++LPI+ V+
Sbjct: 360 CISDVTIRLTQKPKQLQWNCTNVEGVTSQVTPQSCDLLPPSKGPLQCTFPENQLPIEAVK 419
Query: 471 LNTCSASISK 480
L TCS + SK
Sbjct: 420 LKTCSYTASK 429
>gi|297816104|ref|XP_002875935.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321773|gb|EFH52194.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 469
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/464 (69%), Positives = 378/464 (81%), Gaps = 7/464 (1%)
Query: 19 ILSTLLTLGLLSPQVAECRPTKN--SYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAF 76
+ L+ L +LS E R +N S I F ALNCRKHSA+LTDFG VGDGKTSNT AF
Sbjct: 5 MFGILVILAILSFPAIESRSHQNVVSSGIRFSALNCRKHSAILTDFGAVGDGKTSNTNAF 64
Query: 77 NTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPP 136
AIS LS+ A DGGAQL+VPPGKWLTGSFNLTSHFTL+I + A +LASQDESEWP++ P
Sbjct: 65 KKAISKLSQMATDGGAQLVVPPGKWLTGSFNLTSHFTLFIQRGATILASQDESEWPVIAP 124
Query: 137 LPSYGRGRDEPG-GRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYL 195
LPSYG+GRD G GRF+SLI GTNLTDVV+TG N TINGQG+ WW K++KKQF +TRPYL
Sbjct: 125 LPSYGKGRDGTGTGRFNSLISGTNLTDVVITGNNGTINGQGQYWWDKFKKKQFKLTRPYL 184
Query: 196 IEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTR 255
IE++FS N+QISN+TLIDSPSWN+HPVY +NV+++ +T+ AP+ PNTDGINPDSCTNT
Sbjct: 185 IELLFSKNIQISNITLIDSPSWNIHPVYCNNVIVKSVTVLAPVTVPNTDGINPDSCTNTL 244
Query: 256 IEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKD 315
IED YIVSGDDC+AVKSGWD+YGIK GMPTQ L IRRL CISP SA +ALGSEMSGGIKD
Sbjct: 245 IEDCYIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCISPKSAGVALGSEMSGGIKD 304
Query: 316 VRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDP 375
VR ED+T NT+S +RIKTA GRGAYVK+I+ RR+TMKTMKYVFWM+G+Y SHPD GFDP
Sbjct: 305 VRIEDVTLTNTESAIRIKTAAGRGAYVKDIFARRITMKTMKYVFWMSGNYNSHPDEGFDP 364
Query: 376 KALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQ 435
KALP VT INYRDM A+NVT SA LDGI DPFTGICISNVTI L +K K++QWNCT++
Sbjct: 365 KALPEVTNINYRDMTAENVTMSASLDGIHKDPFTGICISNVTIALADKAKKVQWNCTDVA 424
Query: 436 GITSRVTPQACELLPKKEP----TDCFFPDDKLPIDDVRLNTCS 475
G+TSRVTP+ C LLP+K+ DC FP D +PI+ V L CS
Sbjct: 425 GVTSRVTPEPCSLLPEKKAPAKNEDCAFPSDLIPIESVVLKKCS 468
>gi|356560736|ref|XP_003548644.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 479
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/478 (68%), Positives = 389/478 (81%), Gaps = 7/478 (1%)
Query: 1 MEFCLKSRNNILHPHVIKILSTLLTLGLLSPQVAECRPTKNSYT-IEFQALNCRKHSAVL 59
M+ KS + VI+++ LL + LLS +VAE R K + T E++A+NCR HSA L
Sbjct: 1 MKLLWKSHVRV---QVIRLVCALLLVTLLSSEVAESRKAKTARTSFEYKAINCRAHSASL 57
Query: 60 TDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKD 119
DFGGVGDG TSNTKAF +AIS+LS+YA+ GGAQL VP GKWLTGSF+L SHFTLY++KD
Sbjct: 58 IDFGGVGDGNTSNTKAFQSAISHLSQYASKGGAQLYVPAGKWLTGSFSLISHFTLYLNKD 117
Query: 120 ALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPW 179
A LLASQD EWP++ PLPSYGRGRD GR++SLIFGTNLTDV+VTG N TI+GQG W
Sbjct: 118 AFLLASQDIREWPVIEPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAFW 177
Query: 180 WIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPID 239
W K++KK+ TRPYLIE+MFSD +QISNLTL++SPSWNVHPVYSSN++I+GLTI AP+
Sbjct: 178 WQKFQKKKLKYTRPYLIELMFSDKIQISNLTLLNSPSWNVHPVYSSNIIIKGLTIIAPVP 237
Query: 240 SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPD 299
SPNTDGINPDSCTNTRIED YIVSGDDCVAVKSGWDEYGIK G PT+ L+IRRL CISP+
Sbjct: 238 SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPE 297
Query: 300 SAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVF 359
SAAIALGSEMSGGI+DVRAEDITAI+T+SGVRIKTAVGRG YVK+IYV+RMTM TMK+VF
Sbjct: 298 SAAIALGSEMSGGIQDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWVF 357
Query: 360 WMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
WMTG+YGSH D +DP ALP + GINYRD+VADNVT +A+L+GI NDPFTGICI+NVTI
Sbjct: 358 WMTGNYGSHADSHYDPNALPEINGINYRDVVADNVTIAARLEGISNDPFTGICIANVTIN 417
Query: 420 LTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTD---CFFPDDKLPIDDVRLNTC 474
+ K K+ W CT+I+GITS VTP+ C LP + P C FP + LPID + L C
Sbjct: 418 MAAKAKKQPWACTDIEGITSGVTPKPCNSLPDQGPEKIKACDFPQENLPIDMLELQKC 475
>gi|255537567|ref|XP_002509850.1| polygalacturonase, putative [Ricinus communis]
gi|223549749|gb|EEF51237.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/436 (72%), Positives = 376/436 (86%), Gaps = 3/436 (0%)
Query: 45 IEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTG 104
E+ A++CR H A L DFGGVGDG+TSNTKAF AI +LS+++ DGG+QL VPPGKWLTG
Sbjct: 41 FEYAAISCRAHEASLEDFGGVGDGQTSNTKAFQAAIDHLSQFSYDGGSQLYVPPGKWLTG 100
Query: 105 SFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVV 164
SFNLTSHFTL++ KDA+LLASQDESEWP++ PLPSYGRGRD GGR+SSLIFGTNLTDVV
Sbjct: 101 SFNLTSHFTLFLDKDAVLLASQDESEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVV 160
Query: 165 VTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYS 224
+TG N TI+GQG+ WW K+ + N TRPYLIE+M+S+N+QISNLTL++SPSWN+HP YS
Sbjct: 161 ITGANGTIDGQGDLWWKKFHNGEINYTRPYLIEIMYSNNIQISNLTLMNSPSWNIHPTYS 220
Query: 225 SNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMP 284
SNV++QG+TI AP++SPNTDGINPDSCTNTRIED YIVSGDDCVAVKSGWDEYGI GMP
Sbjct: 221 SNVVVQGITILAPVNSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISFGMP 280
Query: 285 TQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKE 344
T+ L+IRRL CISP SAAIALGSEMSGGI+DVRAEDIT INT+SGVRIKT+VGRG YVK+
Sbjct: 281 TKQLVIRRLTCISPTSAAIALGSEMSGGIQDVRAEDITCINTESGVRIKTSVGRGGYVKD 340
Query: 345 IYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIR 404
IYVR+MTM TMK+VFWMTG+YGSHPD +DP A+P + INYRD+VA+NVT +A+L+GI
Sbjct: 341 IYVRKMTMHTMKWVFWMTGNYGSHPDNNYDPNAIPVIENINYRDIVAENVTMAARLEGIA 400
Query: 405 NDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEP---TDCFFPD 461
DPFTGICISNVTI L +KPK+LQWNCT+I GI+S VTP+ C LLP++E DC FP+
Sbjct: 401 GDPFTGICISNVTIGLAQKPKKLQWNCTDIAGISSGVTPKPCSLLPEQEKEKIADCNFPE 460
Query: 462 DKLPIDDVRLNTCSAS 477
D LPI+++ + CS+S
Sbjct: 461 DSLPIENIEVKMCSSS 476
>gi|356534103|ref|XP_003535597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 466
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/475 (67%), Positives = 392/475 (82%), Gaps = 13/475 (2%)
Query: 1 MEFCLKSRNNILHPHVIKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLT 60
M+ C + RN+ + I ++S +L L ++ +VA + A+NCRKHSAVLT
Sbjct: 5 MKMCPRLRNS----YGIGVISLVLILVSVNVKVASG---------VYYAINCRKHSAVLT 51
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDA 120
DFGGVGDG TSNTKAF +AIS LS+YA+DGGA L+VPPGKWLTG FNLTSHFTL++ A
Sbjct: 52 DFGGVGDGITSNTKAFQSAISKLSQYASDGGAMLVVPPGKWLTGPFNLTSHFTLFLDFGA 111
Query: 121 LLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW 180
++LASQDESEWP LP LPSYGRGRD PGGRFSSLIFGT+LTDVV+TG N I+GQG WW
Sbjct: 112 VILASQDESEWPQLPVLPSYGRGRDAPGGRFSSLIFGTHLTDVVITGNNGLIDGQGAYWW 171
Query: 181 IKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDS 240
K+ + Q +TRPYLIE+M+SD +QIS LTL++SP+W VHPVYSSN++I+GLTI+AP+DS
Sbjct: 172 NKFHQGQLTLTRPYLIEIMYSDQIQISFLTLVNSPTWFVHPVYSSNIIIKGLTIKAPVDS 231
Query: 241 PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS 300
PNTDGINPDSC+N RIED I SGDDC+AVKSGWDEYGI+ GMPTQHLIIRR+ C+SPDS
Sbjct: 232 PNTDGINPDSCSNIRIEDCNITSGDDCIAVKSGWDEYGIRFGMPTQHLIIRRITCVSPDS 291
Query: 301 AAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFW 360
A IALGSEMSGGI DVRAED+TAINT++ VRIKTA+GRG YVK I+V+ M + TMKYVFW
Sbjct: 292 AMIALGSEMSGGIYDVRAEDLTAINTEAAVRIKTAIGRGGYVKNIFVKGMNLNTMKYVFW 351
Query: 361 MTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKL 420
+TG YG HPDPG+DPKALP +TGINYRD+VA NVT+SA+L+GI NDPFTGICISNV+I++
Sbjct: 352 ITGTYGDHPDPGYDPKALPYITGINYRDVVATNVTKSARLEGISNDPFTGICISNVSIQV 411
Query: 421 TEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTDCFFPDDKLPIDDVRLNTCS 475
+E+ K+LQWNC+NI G+TS VTP C LLP+K +C FP D LPID+V+L +C+
Sbjct: 412 SEQQKKLQWNCSNISGVTSNVTPYPCALLPEKGQLECPFPTDTLPIDNVQLKSCN 466
>gi|297821649|ref|XP_002878707.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324546|gb|EFH54966.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/473 (68%), Positives = 383/473 (80%), Gaps = 8/473 (1%)
Query: 12 LHPHVIKILST----LLTLGLLSPQVAECRP--TKNSYTIEFQALNCRKHSAVLTDFGGV 65
++P +K++ T L+ L + S + E R K IE+ ALNCRKH+AVLT+FG V
Sbjct: 5 INPSTLKMIRTSFCILVVLAISSFSMMEARDLGCKGKTNIEYMALNCRKHTAVLTEFGAV 64
Query: 66 GDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLAS 125
GDGKTSNTKAF AI+ L+ AADGG QLIVPPGKWLTGSFNL+SHFTL+I K A +LAS
Sbjct: 65 GDGKTSNTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLSSHFTLFIQKGATILAS 124
Query: 126 QDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRK 185
QDESE+P++ PLPSYG+GRD G F+SLI GTNLTDVV+TG N TINGQG+ WW+KYR
Sbjct: 125 QDESEYPVVAPLPSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWVKYRS 184
Query: 186 KQF-NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTD 244
F N+TRPY IE+MFS NVQISN+T+IDSP+WN+HPVY +NV+++G+TI APIDSPNTD
Sbjct: 185 GGFKNITRPYTIEIMFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTD 244
Query: 245 GINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIA 304
GINPDSCTNT IED Y+VSGDDC+AVKSGWD++GIKVGMPT+ L IRRL CISPDSA IA
Sbjct: 245 GINPDSCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTKQLSIRRLTCISPDSAGIA 304
Query: 305 LGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGD 364
LGSEMSGGIKDVR EDIT + TQS +RIKTAVGRG YVK+I+ RR TMKTMKYVFWM+G
Sbjct: 305 LGSEMSGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGA 364
Query: 365 YGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKP 424
Y HP GFDPKA+P +T INYRDM ADNVTQ A+LDG +NDPFT IC+SN+ I L +P
Sbjct: 365 YNQHPASGFDPKAMPEITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEP 424
Query: 425 KELQWNCTNIQGITSRVTPQACELLPKK-EPTDCFFPDDKLPIDDVRLNTCSA 476
K+L WNCTNI G++S+VTP+ C LLP+K P DC FP DK+PI+ V LN CSA
Sbjct: 425 KKLLWNCTNISGVSSKVTPKPCSLLPEKGAPVDCAFPVDKIPIESVVLNKCSA 477
>gi|42569272|ref|NP_179968.2| Pectin lyase-like protein [Arabidopsis thaliana]
gi|91806252|gb|ABE65854.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
gi|330252406|gb|AEC07500.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 477
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/473 (68%), Positives = 383/473 (80%), Gaps = 8/473 (1%)
Query: 12 LHPHVIKILST----LLTLGLLSPQVAECR--PTKNSYTIEFQALNCRKHSAVLTDFGGV 65
++P +K++ T L+ L + S + E R +K IE+ ALNCRKH+AVLT+FG V
Sbjct: 5 INPSTLKMIRTSFCILVVLAISSFSMMEARDLASKGKTNIEYMALNCRKHTAVLTEFGAV 64
Query: 66 GDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLAS 125
GDGKTSNTKAF AI+ L+ AADGG QLIVPPGKWLTGSFNLTSHFTL+I K A +LAS
Sbjct: 65 GDGKTSNTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHFTLFIQKGATILAS 124
Query: 126 QDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRK 185
QDESE+P++ PLPSYG+GRD G F+SLI GTNLTDVV+TG N TINGQG+ WW+KYR
Sbjct: 125 QDESEYPVVAPLPSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWVKYRS 184
Query: 186 KQFN-VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTD 244
F +TRPY IE++FS NVQISN+T+IDSP+WN+HPVY +NV+++G+TI APIDSPNTD
Sbjct: 185 GGFKGITRPYTIEIIFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTD 244
Query: 245 GINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIA 304
GINPDSCTNT IED Y+VSGDDC+AVKSGWD++GIKVGMPTQ L IRRL CISPDSA IA
Sbjct: 245 GINPDSCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIA 304
Query: 305 LGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGD 364
LGSEMSGGIKDVR EDIT + TQS +RIKTAVGRG YVK+I+ RR TMKTMKYVFWM+G
Sbjct: 305 LGSEMSGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGA 364
Query: 365 YGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKP 424
Y HP GFDPKA+P +T INYRDM ADNVTQ A+LDG +NDPFT IC+SN+ I L +P
Sbjct: 365 YNQHPASGFDPKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEP 424
Query: 425 KELQWNCTNIQGITSRVTPQACELLPKK-EPTDCFFPDDKLPIDDVRLNTCSA 476
K+L WNCT+I G++S+VTP+ C LLP+K P DC FP DK+PI+ V LN CSA
Sbjct: 425 KKLLWNCTSISGVSSKVTPKPCSLLPEKGAPVDCAFPVDKIPIESVVLNKCSA 477
>gi|116831111|gb|ABK28510.1| unknown [Arabidopsis thaliana]
Length = 478
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/473 (68%), Positives = 383/473 (80%), Gaps = 8/473 (1%)
Query: 12 LHPHVIKILST----LLTLGLLSPQVAECR--PTKNSYTIEFQALNCRKHSAVLTDFGGV 65
++P +K++ T L+ L + S + E R +K IE+ ALNCRKH+AVLT+FG V
Sbjct: 5 INPSTLKMIRTSFCILVVLAISSFSMMEARDLASKGKTNIEYMALNCRKHTAVLTEFGAV 64
Query: 66 GDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLAS 125
GDGKTSNTKAF AI+ L+ AADGG QLIVPPGKWLTGSFNLTSHFTL+I K A +LAS
Sbjct: 65 GDGKTSNTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHFTLFIQKGATILAS 124
Query: 126 QDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRK 185
QDESE+P++ PLPSYG+GRD G F+SLI GTNLTDVV+TG N TINGQG+ WW+KYR
Sbjct: 125 QDESEYPVVAPLPSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWVKYRS 184
Query: 186 KQFN-VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTD 244
F +TRPY IE++FS NVQISN+T+IDSP+WN+HPVY +NV+++G+TI APIDSPNTD
Sbjct: 185 GGFKGITRPYTIEIIFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTD 244
Query: 245 GINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIA 304
GINPDSCTNT IED Y+VSGDDC+AVKSGWD++GIKVGMPTQ L IRRL CISPDSA IA
Sbjct: 245 GINPDSCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIA 304
Query: 305 LGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGD 364
LGSEMSGGIKDVR EDIT + TQS +RIKTAVGRG YVK+I+ RR TMKTMKYVFWM+G
Sbjct: 305 LGSEMSGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGA 364
Query: 365 YGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKP 424
Y HP GFDPKA+P +T INYRDM ADNVTQ A+LDG +NDPFT IC+SN+ I L +P
Sbjct: 365 YNQHPASGFDPKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEP 424
Query: 425 KELQWNCTNIQGITSRVTPQACELLPKK-EPTDCFFPDDKLPIDDVRLNTCSA 476
K+L WNCT+I G++S+VTP+ C LLP+K P DC FP DK+PI+ V LN CSA
Sbjct: 425 KKLLWNCTSISGVSSKVTPKPCSLLPEKGAPVDCAFPVDKIPIESVVLNKCSA 477
>gi|357443845|ref|XP_003592200.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481248|gb|AES62451.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 481
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/463 (68%), Positives = 380/463 (82%), Gaps = 6/463 (1%)
Query: 15 HVIKILSTLLTLGLLSPQVAECRPTKNSY--TIEFQALNCRKHSAVLTDFGGVGDGKTSN 72
+VI ++S LL G L AEC+ +S ++ A+NCRKHSAVLTDFGGVGDGKT N
Sbjct: 16 YVIGVISVLLIFGSL----AECKEPSSSKLKNFDYPAINCRKHSAVLTDFGGVGDGKTLN 71
Query: 73 TKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWP 132
TKAFN+AI+NLS+YA DGGAQLIVPPGKWLTGSFNLTSHFTL++ KD+++LASQDESEWP
Sbjct: 72 TKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKDSVILASQDESEWP 131
Query: 133 LLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTR 192
P LPSYG GR+ GRFSSL+FGTNLTDV++TG N TI+GQG WW K+ K Q +TR
Sbjct: 132 QFPVLPSYGSGRNASDGRFSSLVFGTNLTDVIITGNNGTIDGQGSYWWDKFHKGQMKITR 191
Query: 193 PYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCT 252
PY+IE+M+SD +QISNLTLI+SPSW VHPVYSSN++I GLTI AP+D PNTDGI+PDSCT
Sbjct: 192 PYMIEIMYSDQIQISNLTLINSPSWFVHPVYSSNIIINGLTILAPVDIPNTDGIDPDSCT 251
Query: 253 NTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGG 312
N RIEDNYIVSGDDC+A+KSGWDEYGIK G P+Q +IIRRL CISP SA +ALGSEMSGG
Sbjct: 252 NVRIEDNYIVSGDDCIAIKSGWDEYGIKFGKPSQQIIIRRLTCISPKSAMVALGSEMSGG 311
Query: 313 IKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPG 372
I+DVR ED+TAI T+S VRIKTA+GRGAYVK+I+V+ M + TMKYVFWMTG Y SHPD G
Sbjct: 312 IQDVRVEDVTAIKTESAVRIKTAIGRGAYVKDIFVKGMNLDTMKYVFWMTGSYKSHPDNG 371
Query: 373 FDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCT 432
FDP ALP ++ INYRD+ A NVT + KLDGI NDPFTGIC+SN TI+++ K+L WNCT
Sbjct: 372 FDPNALPKISEINYRDVTAKNVTIAGKLDGISNDPFTGICVSNATIEMSAHKKKLPWNCT 431
Query: 433 NIQGITSRVTPQACELLPKKEPTDCFFPDDKLPIDDVRLNTCS 475
++ G+TS V+P CELL +KE +C FP DKL I++V+ TC+
Sbjct: 432 DVSGVTSNVSPTPCELLAEKEKFECPFPTDKLTIENVQFKTCN 474
>gi|359490609|ref|XP_002273177.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 465
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/476 (69%), Positives = 390/476 (81%), Gaps = 13/476 (2%)
Query: 1 MEFCLKSRNNILHPHVIKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLT 60
MEF L R + H+ + L+ +GLL V + + E++A+NCRKHSAVLT
Sbjct: 1 MEFSLYPRKS----HLFR-FHVLVVVGLLMSSV------RGGGSEEYRAINCRKHSAVLT 49
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDA 120
DFG GDGKT NTKAF +AI+NLS+ A DGGAQLIVPPGKWLTGSFNLTSHFTL++HKDA
Sbjct: 50 DFGAKGDGKTMNTKAFKSAIANLSQVAGDGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDA 109
Query: 121 LLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW 180
++L +QDE+ +PL+ LPSYG GRD GGR +SLIFGTNLTDVV+TGGN TI+GQG+ WW
Sbjct: 110 VILGAQDEAAYPLIEILPSYGAGRDG-GGRHASLIFGTNLTDVVITGGNGTIHGQGQYWW 168
Query: 181 IKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDS 240
K+R + TRPYLIE+M+SD VQISNL LIDSPSWNVHP YSSNV+IQ LTI AP+ S
Sbjct: 169 DKFRADKLKDTRPYLIEIMYSDQVQISNLILIDSPSWNVHPTYSSNVIIQWLTIIAPVGS 228
Query: 241 PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS 300
PNTDGINPDS N IED +IVSGDDC+AVKSGWD+YGIK GMPT+ LIIRRL CISPDS
Sbjct: 229 PNTDGINPDSSKNVLIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLIIRRLTCISPDS 288
Query: 301 AAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFW 360
A IALGSEMSGGIK+VRAE+ITAI+++SGVRIK+ VGRG YVK+IY R MTMKTMKYVFW
Sbjct: 289 AVIALGSEMSGGIKNVRAENITAIDSESGVRIKSGVGRGGYVKDIYARGMTMKTMKYVFW 348
Query: 361 MTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKL 420
MTGDYG HPD G+DPKALP + INYRDMVA+NVT SA+LDGI DPFTGICISNV I L
Sbjct: 349 MTGDYGQHPDDGWDPKALPKIENINYRDMVAENVTYSARLDGISGDPFTGICISNVKIGL 408
Query: 421 TEKPKELQWNCTNIQGITSRVTPQACELL-PKKEPTDCFFPDDKLPIDDVRLNTCS 475
TEKPK+LQWNCTN++G++S+VTP +C+LL P K+ +C FP+DKLPI+DV++ CS
Sbjct: 409 TEKPKKLQWNCTNVEGVSSQVTPPSCDLLHPSKKVFNCPFPEDKLPIEDVQMKICS 464
>gi|356568425|ref|XP_003552411.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/469 (68%), Positives = 383/469 (81%), Gaps = 4/469 (0%)
Query: 15 HVIKILSTLLTLGLLSPQVAECRPTKNSYT-IEFQALNCRKHSAVLTDFGGVGDGKTSNT 73
HVI+ +L + LLS + E R K T +E+ A+NCR HSA LTDFGGVGDGKTSNT
Sbjct: 12 HVIRTFFAILLVALLSSERVESRKAKVVTTSLEYNAINCRAHSAALTDFGGVGDGKTSNT 71
Query: 74 KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPL 133
KAF +AIS+LS+YA++GG+QL VP GKWLTGSF+LTSHFTLY+ KDA+LLASQD +EWP+
Sbjct: 72 KAFQSAISHLSQYASEGGSQLYVPAGKWLTGSFSLTSHFTLYLDKDAVLLASQDITEWPV 131
Query: 134 LPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRP 193
L PLPSYGRGRD P GRF+SLIFGTNLTDV+VTG N TI+GQGE WW ++ +K+ TRP
Sbjct: 132 LEPLPSYGRGRDAPAGRFTSLIFGTNLTDVIVTGENGTIDGQGEFWWQQFHRKKLKYTRP 191
Query: 194 YLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTN 253
YLIE+MFSDN+QISNLTL++SPSWNVHPVYSSN+++QG+TI AP+ SPNTDGINPDSCTN
Sbjct: 192 YLIELMFSDNIQISNLTLLNSPSWNVHPVYSSNIIVQGITIYAPVTSPNTDGINPDSCTN 251
Query: 254 TRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGI 313
RIED YIVSGDDCVAVKSGWDEYGIK G PT+ L+IRRL CISP SA IALGSEMSGGI
Sbjct: 252 VRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPYSATIALGSEMSGGI 311
Query: 314 KDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGF 373
+DVRAEDITAI T+SGVRIKTAVGRG YVK+IYV+RMT+ TMK+ F MTGDY SH D +
Sbjct: 312 QDVRAEDITAIQTESGVRIKTAVGRGGYVKDIYVKRMTLHTMKWAFKMTGDYNSHADGHY 371
Query: 374 DPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTN 433
DP ALP + INYRD+VA+NVT +A+ GI NDPFTGICI+NVT+++ K K+ W CT+
Sbjct: 372 DPNALPEIKNINYRDVVAENVTIAARFQGISNDPFTGICIANVTLRMAAKAKKQPWTCTD 431
Query: 434 IQGITSRVTPQACELLPKKEP---TDCFFPDDKLPIDDVRLNTCSASIS 479
I+G+TS VTP C LLP + P T C FP D LPID V L C+ +++
Sbjct: 432 IEGMTSGVTPPPCGLLPDQGPEKITACDFPADNLPIDIVELKKCTTTMT 480
>gi|3738338|gb|AAC63679.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 466
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/458 (69%), Positives = 375/458 (81%), Gaps = 4/458 (0%)
Query: 23 LLTLGLLSPQVAECR--PTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAI 80
L+ L + S + E R +K IE+ ALNCRKH+AVLT+FG VGDGKTSNTKAF AI
Sbjct: 9 LVVLAISSFSMMEARDLASKGKTNIEYMALNCRKHTAVLTEFGAVGDGKTSNTKAFKEAI 68
Query: 81 SNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSY 140
+ L+ AADGG QLIVPPGKWLTGSFNLTSHFTL+I K A +LASQDESE+P++ PLPSY
Sbjct: 69 TKLAPKAADGGVQLIVPPGKWLTGSFNLTSHFTLFIQKGATILASQDESEYPVVAPLPSY 128
Query: 141 GRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFN-VTRPYLIEVM 199
G+GRD G F+SLI GTNLTDVV+TG N TINGQG+ WW+KYR F +TRPY IE++
Sbjct: 129 GQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWVKYRSGGFKGITRPYTIEII 188
Query: 200 FSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDN 259
FS NVQISN+T+IDSP+WN+HPVY +NV+++G+TI APIDSPNTDGINPDSCTNT IED
Sbjct: 189 FSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPDSCTNTLIEDC 248
Query: 260 YIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAE 319
Y+VSGDDC+AVKSGWD++GIKVGMPTQ L IRRL CISPDSA IALGSEMSGGIKDVR E
Sbjct: 249 YVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEMSGGIKDVRIE 308
Query: 320 DITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALP 379
DIT + TQS +RIKTAVGRG YVK+I+ RR TMKTMKYVFWM+G Y HP GFDPKA+P
Sbjct: 309 DITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHPASGFDPKAMP 368
Query: 380 TVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITS 439
+T INYRDM ADNVTQ A+LDG +NDPFT IC+SN+ I L +PK+L WNCT+I G++S
Sbjct: 369 VITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLWNCTSISGVSS 428
Query: 440 RVTPQACELLPKK-EPTDCFFPDDKLPIDDVRLNTCSA 476
+VTP+ C LLP+K P DC FP DK+PI+ V LN CSA
Sbjct: 429 KVTPKPCSLLPEKGAPVDCAFPVDKIPIESVVLNKCSA 466
>gi|225426168|ref|XP_002278930.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 480
Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/434 (73%), Positives = 362/434 (83%), Gaps = 3/434 (0%)
Query: 45 IEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTG 104
E+ A+NCR HSA LTDFGGVGDG TSNTKAF AI +LS++A+DGG+QL VPPG+WLTG
Sbjct: 41 FEYSAINCRAHSASLTDFGGVGDGTTSNTKAFQAAIDHLSQFASDGGSQLFVPPGRWLTG 100
Query: 105 SFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVV 164
SFNLTSHFTLY+HKDA+LLASQDE EWP++ PLPSYGRGRD GGR+ SLIFGTNLTDVV
Sbjct: 101 SFNLTSHFTLYLHKDAVLLASQDEHEWPVIDPLPSYGRGRDTQGGRYISLIFGTNLTDVV 160
Query: 165 VTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYS 224
+TG N TI+GQG WW K+ K + TRPYLIE+M SDNVQIS+LTL++SPSWNVHPVYS
Sbjct: 161 ITGENGTIDGQGALWWAKFHKGELKYTRPYLIEIMHSDNVQISSLTLVNSPSWNVHPVYS 220
Query: 225 SNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMP 284
SNV+IQGLTI AP+ SPNTDGINPDSCTNTRIED YIVSGDDC+AVKSGWDEYGI GMP
Sbjct: 221 SNVIIQGLTITAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDEYGIAYGMP 280
Query: 285 TQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKE 344
T+ L+IRRL CISP SA IALGSEMSGGI+DVRAEDI AI+T+SGVRIKTAVGRG YVK+
Sbjct: 281 TKQLVIRRLTCISPFSATIALGSEMSGGIEDVRAEDILAIDTESGVRIKTAVGRGGYVKD 340
Query: 345 IYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIR 404
IYVR M MKTMK+ FWMTG+YGSH D +DP ALP + GINYRDMVA+NVT + +L+GI
Sbjct: 341 IYVRSMIMKTMKWAFWMTGNYGSHADNNYDPNALPAIQGINYRDMVAENVTMAGRLEGIS 400
Query: 405 NDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTD---CFFPD 461
DPFTGICISNVTI L +K K+ W CT+I GITS V PQ C+LLP + P C FP
Sbjct: 401 GDPFTGICISNVTIGLAKKAKKAPWTCTDIAGITSGVVPQPCDLLPDQGPEKIVACNFPT 460
Query: 462 DKLPIDDVRLNTCS 475
D LPID V + TCS
Sbjct: 461 DSLPIDTVEVQTCS 474
>gi|357443849|ref|XP_003592202.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
gi|355481250|gb|AES62453.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
Length = 487
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/445 (70%), Positives = 381/445 (85%), Gaps = 3/445 (0%)
Query: 33 VAECR-PTKNSYT-IEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADG 90
+AECR P+ + ++ A+NCRKHSAVLTDFGGVGDGKT NTKAFN+AI+NLS+YA DG
Sbjct: 38 LAECRIPSISKLNNFDYPAINCRKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDG 97
Query: 91 GAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGR 150
GAQLIVPPGKWLTGSFNLTSHFTL++ KDA++LASQ ES+WP LP LPSYGRGR++PGGR
Sbjct: 98 GAQLIVPPGKWLTGSFNLTSHFTLFLQKDAVILASQYESDWPQLPALPSYGRGREKPGGR 157
Query: 151 FSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLT 210
FSSLIFGTNL DV++TG N TI+GQG WW K++KKQ +TRPY+IE+M+SD +QISNLT
Sbjct: 158 FSSLIFGTNLIDVIITGNNGTIDGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLT 217
Query: 211 LIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAV 270
L++SPSW VHPVYSSN++I GLTI AP+D PNTDGI+PDS TN IEDNYIVSGDDC+A+
Sbjct: 218 LVNSPSWFVHPVYSSNIIINGLTILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAI 277
Query: 271 KSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGV 330
KSGWDEYGIKVG P+Q++I+RRL CISP SA +ALGSEMSGGI+DVR ED+TAINT+S V
Sbjct: 278 KSGWDEYGIKVGKPSQNIIVRRLTCISPKSALVALGSEMSGGIQDVRIEDVTAINTESAV 337
Query: 331 RIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMV 390
RIK+AVGRGA+VK+I+V+ M + T+KYVFWMTG YG HPD GFDP ALP ++GINYRD+
Sbjct: 338 RIKSAVGRGAFVKDIFVKGMDLNTLKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVT 397
Query: 391 ADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLP 450
A NVT + K++GI NDPFTGIC+SNVTI+++ K+L WNCT+I G+TS V P+ CELL
Sbjct: 398 AKNVTIAGKVEGISNDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPCELLK 457
Query: 451 KKEPTDCFFPDDKLPIDDVRLNTCS 475
+KE +C FP DKLPI++V+ TC+
Sbjct: 458 EKE-IECPFPRDKLPIENVQFKTCN 481
>gi|388512935|gb|AFK44529.1| unknown [Lotus japonicus]
Length = 469
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/462 (67%), Positives = 379/462 (82%), Gaps = 3/462 (0%)
Query: 17 IKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAF 76
+ +L + + L S V E T E+ A+NCR +SA +TDFGGVGDG T NT+AF
Sbjct: 3 VLLLLVFMMVVLPSLHVVESVRTPVLENFEYCAVNCRAYSASVTDFGGVGDGTTLNTQAF 62
Query: 77 NTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPP 136
AI +LS+Y+++GG+QL VPPG+WLTGSFNLTSHFTL+IHKDA++L SQDE+EWP++ P
Sbjct: 63 RKAIEHLSQYSSNGGSQLYVPPGRWLTGSFNLTSHFTLFIHKDAVILGSQDENEWPVIDP 122
Query: 137 LPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLI 196
LPSYGRGRD GGRFSSLIFGT+LTDV++TG N T++GQG+ WW K+ KQ TRPYLI
Sbjct: 123 LPSYGRGRDTQGGRFSSLIFGTHLTDVIITGDNGTLDGQGDLWWKKFHNKQLQYTRPYLI 182
Query: 197 EVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRI 256
E+M+SDNVQISNLTL++SPSWN+HPVY SNV++QG+TI AP+ SPNTDGINPDSCTNTRI
Sbjct: 183 EIMYSDNVQISNLTLVNSPSWNIHPVYCSNVIVQGITILAPVTSPNTDGINPDSCTNTRI 242
Query: 257 EDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDV 316
ED YIVSGDDCVAVKSGWDEYGI GMPT+HL+IRRL CISP SA IALGSEMSGGI+DV
Sbjct: 243 EDCYIVSGDDCVAVKSGWDEYGISYGMPTKHLVIRRLTCISPTSAVIALGSEMSGGIEDV 302
Query: 317 RAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPK 376
RAEDI AIN++SGVRIKTAVGRG YV++IYVRRMTMKTMK+VFWMTGDYGSH D +DP
Sbjct: 303 RAEDILAINSESGVRIKTAVGRGGYVRDIYVRRMTMKTMKWVFWMTGDYGSHADNNYDPN 362
Query: 377 ALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQG 436
A+P + INYRDMVA+NVT +A+L GI PFTGICISNVTI+L +K K++ W CT++ G
Sbjct: 363 AIPVIENINYRDMVAENVTMAARLGGISGAPFTGICISNVTIELAKKAKKVPWTCTDVSG 422
Query: 437 ITSRVTPQACELLPKKEPTD---CFFPDDKLPIDDVRLNTCS 475
I+S VTP+ CELLP + C FP+D L I+DV++ TC+
Sbjct: 423 ISSGVTPEPCELLPGQAEEKFGACSFPEDNLAIEDVKVQTCT 464
>gi|388499792|gb|AFK37962.1| unknown [Lotus japonicus]
Length = 469
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/462 (67%), Positives = 379/462 (82%), Gaps = 3/462 (0%)
Query: 17 IKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAF 76
+ +L + + L S V E T E+ A+NCR +SA +TDFGGVGDG T NT+AF
Sbjct: 3 VLLLLVFMMVVLPSLHVVESVRTPVLENFEYCAVNCRAYSASVTDFGGVGDGTTLNTQAF 62
Query: 77 NTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPP 136
AI +LS+Y+++GG+QL VPPG+WLTGS NLTSHFTL+IHKDA++L SQDE+EWP++ P
Sbjct: 63 RKAIEHLSQYSSNGGSQLYVPPGRWLTGSLNLTSHFTLFIHKDAVILGSQDENEWPVIDP 122
Query: 137 LPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLI 196
LPSYGRGRD GGRFSSLIFGT+LTDV++TG N T++GQG+ WW K+ KQ TRPYLI
Sbjct: 123 LPSYGRGRDTQGGRFSSLIFGTHLTDVIITGDNGTLDGQGDLWWKKFHNKQLQYTRPYLI 182
Query: 197 EVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRI 256
E+M+SDNVQISNLTL++SPSWN+HPVY SNV++QG+TI AP+ SPNTDGINPDSCTNTRI
Sbjct: 183 EIMYSDNVQISNLTLVNSPSWNIHPVYCSNVIVQGITILAPVTSPNTDGINPDSCTNTRI 242
Query: 257 EDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDV 316
ED YIVSGDDCVAVKSGWDEYGI GMPT+HL+IRRL CISP SA IALGSEMSGGI+DV
Sbjct: 243 EDCYIVSGDDCVAVKSGWDEYGISYGMPTKHLVIRRLTCISPTSAVIALGSEMSGGIEDV 302
Query: 317 RAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPK 376
RAEDI AIN++SGVRIKTAVGRG YV++IYVRRMTMKTMK+VFWMTGDYGSH D +DP
Sbjct: 303 RAEDILAINSESGVRIKTAVGRGGYVRDIYVRRMTMKTMKWVFWMTGDYGSHADNNYDPN 362
Query: 377 ALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQG 436
A+P + INYRDMVA+NVT +A+L+GI PFTGICISNVTI+L +K K++ W CT++ G
Sbjct: 363 AIPVIENINYRDMVAENVTMAARLEGISGAPFTGICISNVTIELAKKAKKVPWTCTDVSG 422
Query: 437 ITSRVTPQACELLPKKEPTD---CFFPDDKLPIDDVRLNTCS 475
I+S VTP+ CELLP + C FP+D L I+DV++ TC+
Sbjct: 423 ISSGVTPEPCELLPGQAEEKFGACSFPEDNLAIEDVKVQTCT 464
>gi|224058441|ref|XP_002299511.1| predicted protein [Populus trichocarpa]
gi|222846769|gb|EEE84316.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 669 bits (1725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/478 (66%), Positives = 382/478 (79%), Gaps = 7/478 (1%)
Query: 1 MEFCLKSRNNILHPHVIKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLT 60
ME +R + VI + L L L E R + E+ AL+CR HSA ++
Sbjct: 1 MELWRSARRS----KVIDVRGLLGVLVLFYTVGVESRKSVKWDYFEYAALSCRAHSASVS 56
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDA 120
DFGGVGDG T+NTKAF AI +LS+++++GG+ L VPPG+WLTGSFNLTS+FTLY+ KDA
Sbjct: 57 DFGGVGDGTTANTKAFQAAIDHLSQFSSEGGSILYVPPGRWLTGSFNLTSYFTLYLDKDA 116
Query: 121 LLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW 180
+LLASQDESE+PL+ PLPSYGRGRD G R+SSLIFG NLTDV++TG N TI+GQGE WW
Sbjct: 117 VLLASQDESEYPLIEPLPSYGRGRDADGARYSSLIFGNNLTDVIITGANGTIDGQGELWW 176
Query: 181 IKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDS 240
K+R + N TRPYLIE+MFS N+QISNLTLI+SPSWNVHPVY SNV++QGLTI AP+ S
Sbjct: 177 TKFRAGELNYTRPYLIEIMFSTNIQISNLTLINSPSWNVHPVYCSNVVVQGLTILAPVRS 236
Query: 241 PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS 300
PNTDGINPDSCTNTRIED YIVSGDDCVAVKSGWDEYGI GMPT+ L+IRRL CISP S
Sbjct: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRRLTCISPTS 296
Query: 301 AAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFW 360
A IALGSEMSGGI+DVRAEDITAI+++SGVRIKTAVGRG YVK+IYVR MT+KTMK+VFW
Sbjct: 297 AVIALGSEMSGGIEDVRAEDITAIDSESGVRIKTAVGRGGYVKDIYVRGMTLKTMKWVFW 356
Query: 361 MTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKL 420
MTG+YGSHPD +DP A+P + INYRD+VA+NVT +AKL+GI DPFTGICISNVTI L
Sbjct: 357 MTGNYGSHPDNNYDPNAIPVIQNINYRDVVAENVTMAAKLEGIAGDPFTGICISNVTIGL 416
Query: 421 TEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTD---CFFPDDKLPIDDVRLNTCS 475
+ K+LQWNCT++ GITS V P+ C LLP + P C FP+D LP++++ + TCS
Sbjct: 417 AQNSKKLQWNCTDVAGITSEVNPKPCALLPDQGPGKIGGCNFPEDSLPVENMEVQTCS 474
>gi|30692538|gb|AAP33475.1| polygalacturonase-like protein [Fragaria x ananassa]
Length = 474
Score = 668 bits (1724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/435 (71%), Positives = 365/435 (83%), Gaps = 3/435 (0%)
Query: 44 TIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLT 103
+ E+ A+NCR HSA LT+FGGVGDGKTSNTKAF TAIS LS+YA DGGAQL VP GKWLT
Sbjct: 35 SFEYSAMNCRAHSASLTEFGGVGDGKTSNTKAFQTAISKLSQYATDGGAQLFVPAGKWLT 94
Query: 104 GSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDV 163
GSF+LTSHFTLY+HKD++LLASQD +EWP+L LPSYGRGRD GR+SSLIFGTNLTDV
Sbjct: 95 GSFSLTSHFTLYLHKDSVLLASQDLNEWPVLKALPSYGRGRDAAAGRYSSLIFGTNLTDV 154
Query: 164 VVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVY 223
+VTG N TI+GQGE WW ++ KK+ TRPYLIE+MFS ++QISNLTL++SPSWNVHPVY
Sbjct: 155 IVTGENGTIDGQGEFWWQQFHKKKLKYTRPYLIEIMFSSDIQISNLTLLNSPSWNVHPVY 214
Query: 224 SSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGM 283
SSN+++QG+TI API SPNTDGINPDSCTNT+IED YIVSGDDCVAVKSGWDEYGI GM
Sbjct: 215 SSNIIVQGITIIAPISSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGISFGM 274
Query: 284 PTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVK 343
PT+ L+IRRL CISP SA IALGSEMSGGI+DVRAEDI AINT+S VRIKTAVGRGAYVK
Sbjct: 275 PTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIVAINTESAVRIKTAVGRGAYVK 334
Query: 344 EIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGI 403
+IYVRRMT+ TMK+ FWMTG+YGSH D +D A P +TGINYRD+VA+NVT +A+L+GI
Sbjct: 335 DIYVRRMTLHTMKWAFWMTGNYGSHADGNYDKNAFPEITGINYRDVVAENVTMAARLEGI 394
Query: 404 RNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKK---EPTDCFFP 460
+ PFTGIC+SNVTI L +K K+ W CT+IQGITS VTP C LLP + +P C FP
Sbjct: 395 ADHPFTGICMSNVTIGLAKKAKKQPWTCTDIQGITSGVTPTPCGLLPDQGTDKPGGCDFP 454
Query: 461 DDKLPIDDVRLNTCS 475
D +PID V + C+
Sbjct: 455 TDDIPIDTVEIKKCT 469
>gi|356528677|ref|XP_003532926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/434 (70%), Positives = 372/434 (85%), Gaps = 3/434 (0%)
Query: 45 IEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTG 104
E+ A++CR +SA L +FGGVGDG T NTKAF AI NLS+YAA GG+QL VPPGKWLTG
Sbjct: 56 FEYCAMSCRAYSASLEEFGGVGDGTTLNTKAFQAAIENLSQYAASGGSQLYVPPGKWLTG 115
Query: 105 SFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVV 164
SFNLTSHFTL++HKDA++LASQDE++WP++ PLPSYGRGRD GGRFSSLIFGTNLTDV+
Sbjct: 116 SFNLTSHFTLFLHKDAVILASQDENDWPVIDPLPSYGRGRDTQGGRFSSLIFGTNLTDVI 175
Query: 165 VTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYS 224
+TG N TI+GQG+ WW K+ K + TRPYL+E+M+SDNVQISNLTL++SPSWNVHP+YS
Sbjct: 176 ITGDNGTIDGQGDLWWQKFHKGELKYTRPYLVEIMYSDNVQISNLTLVNSPSWNVHPIYS 235
Query: 225 SNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMP 284
SNV++QG+TI AP+ SPNTDGINPDSCT+TRIED YIVSGDDCVAVKSGWDEYGI GMP
Sbjct: 236 SNVVVQGITILAPVTSPNTDGINPDSCTDTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMP 295
Query: 285 TQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKE 344
T+ L+IRRL CISP SAAIALGSEMSGGI+D+RAEDI AINT+SGVRIKTAVGRG YVK+
Sbjct: 296 TKQLVIRRLTCISPFSAAIALGSEMSGGIQDMRAEDIVAINTESGVRIKTAVGRGGYVKD 355
Query: 345 IYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIR 404
I+VRRMTMKTMK+ FWMTG+YGSH D +DP ALP + INYRDMVA+NVT +A+L+GI
Sbjct: 356 IFVRRMTMKTMKWAFWMTGNYGSHADDNYDPNALPVIQNINYRDMVAENVTMAARLEGIS 415
Query: 405 NDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLP---KKEPTDCFFPD 461
DPFTGICISNVTI+L +K K++ W CT+I GI+S VTP C+LLP +++ C FP+
Sbjct: 416 GDPFTGICISNVTIQLAKKAKKVPWTCTDIAGISSDVTPAPCDLLPDQGEEKIGACTFPE 475
Query: 462 DKLPIDDVRLNTCS 475
+ LPI+D+++ TC+
Sbjct: 476 ESLPIEDIKVQTCT 489
>gi|356530050|ref|XP_003533597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/483 (67%), Positives = 389/483 (80%), Gaps = 7/483 (1%)
Query: 1 MEFCLKSRNNILHPHVIKILSTLLTLGLLSPQVAECRPTKNSYT-IEFQALNCRKHSAVL 59
MEF K+ ++ HVI+ LL + LLS + E R K T +E+ A+NCR HSA L
Sbjct: 1 MEFLWKT---LMRIHVIRTFFALLLVALLSSEGVESRKAKVVTTSLEYNAINCRAHSASL 57
Query: 60 TDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKD 119
TDFGGVGDGK SNTKAF +AIS+LS+YA++GG+QL VP GKWLTGSF+LTSHFTLY+ KD
Sbjct: 58 TDFGGVGDGKASNTKAFQSAISHLSQYASEGGSQLYVPAGKWLTGSFSLTSHFTLYLDKD 117
Query: 120 ALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPW 179
A+LLASQD +EWP+L PLPSYGRGRD P GRF+SLIFGTNLTDV+VTG N TI+GQGE W
Sbjct: 118 AVLLASQDITEWPVLEPLPSYGRGRDAPAGRFTSLIFGTNLTDVIVTGENGTIDGQGEFW 177
Query: 180 WIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPID 239
W ++ +K+ TRPYLIE+MFSDN+QISNLTL++SPSWNVHPVYSSN+++QG+TI AP+
Sbjct: 178 WQQFHRKKLKYTRPYLIELMFSDNIQISNLTLLNSPSWNVHPVYSSNIIVQGITIFAPVT 237
Query: 240 SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPD 299
SPNTDGINPDSCTN RIED YIVSGDDCVAVKSGWDEYGIK G PT+ L+IRRL CISP
Sbjct: 238 SPNTDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLMIRRLTCISPY 297
Query: 300 SAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVF 359
SA IALGSEMSGGI+DVRAEDITAI T+SGVRIKTAVGRG YVK+IYV+RMT+ TMK+ F
Sbjct: 298 SATIALGSEMSGGIQDVRAEDITAIQTESGVRIKTAVGRGGYVKDIYVKRMTLHTMKWAF 357
Query: 360 WMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
MTGDY SH D +DP ALP + INYRD+VA+NVT +A+ GI NDPFTGICI+NVT++
Sbjct: 358 KMTGDYNSHADSHYDPNALPEIKNINYRDVVAENVTIAARFQGISNDPFTGICIANVTLR 417
Query: 420 LTEKPKELQWNCTNIQGITSRVTPQACELLPKKEP---TDCFFPDDKLPIDDVRLNTCSA 476
+ K K+ W CT+I+G+TS VTP C LLP + P T C FP D LPID + L C+
Sbjct: 418 MAAKAKKQPWTCTDIEGMTSGVTPPPCGLLPDQGPEKITACDFPADSLPIDMLELKKCTT 477
Query: 477 SIS 479
+++
Sbjct: 478 TMT 480
>gi|356513351|ref|XP_003525377.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 469
Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/446 (69%), Positives = 374/446 (83%), Gaps = 3/446 (0%)
Query: 33 VAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGA 92
V E R E+ A++CR +SA L +FGGVGDG T NTKAF AI +LS+YA+ GG+
Sbjct: 19 VVESRRAPVLDYFEYCAMSCRAYSASLEEFGGVGDGTTLNTKAFQAAIDHLSQYASSGGS 78
Query: 93 QLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFS 152
QL VPPGKWLTGSFNLTSHFTL++HKDA++LASQDE++WP++ PLPSYGRGRD GGRFS
Sbjct: 79 QLYVPPGKWLTGSFNLTSHFTLFLHKDAVILASQDENDWPVIDPLPSYGRGRDTQGGRFS 138
Query: 153 SLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLI 212
SLIFGTNLTDV++TG N TI+GQG+ WW K+RK + TRPYLIE+M+SDNVQISNLTL+
Sbjct: 139 SLIFGTNLTDVIITGDNGTIDGQGDLWWQKFRKGELKYTRPYLIEIMYSDNVQISNLTLV 198
Query: 213 DSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKS 272
+SPSWNVHP+YSSN+++QG+TI AP+ SPNTDGINPDSCTNTRIED YIVSGDDCVAVKS
Sbjct: 199 NSPSWNVHPIYSSNLVVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 258
Query: 273 GWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRI 332
GWDEYGI GMPT+ L+IRRL CISP SA IALGSEMSGGI+DVRAEDI AIN++SGVRI
Sbjct: 259 GWDEYGIAYGMPTKQLVIRRLTCISPFSAVIALGSEMSGGIQDVRAEDIVAINSESGVRI 318
Query: 333 KTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVAD 392
KTAVGRG YVK+I+VRRMTMKTMK+ FWMTG+YGSH D +DP ALP + INYRDMVA+
Sbjct: 319 KTAVGRGGYVKDIFVRRMTMKTMKWAFWMTGNYGSHADDNYDPNALPVIQNINYRDMVAE 378
Query: 393 NVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLP-- 450
NVT +A+L+GI DPFTGICISNVTI+L +K K++ W CT+I GI+S VTP C LLP
Sbjct: 379 NVTMAARLEGISGDPFTGICISNVTIQLAKKAKKVPWTCTDIAGISSDVTPAPCGLLPDQ 438
Query: 451 -KKEPTDCFFPDDKLPIDDVRLNTCS 475
+++ C FP++ LPI+D+++ TC+
Sbjct: 439 GEEKIGACTFPEESLPIEDIKVQTCT 464
>gi|224064057|ref|XP_002301370.1| predicted protein [Populus trichocarpa]
gi|222843096|gb|EEE80643.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/455 (68%), Positives = 371/455 (81%), Gaps = 3/455 (0%)
Query: 28 LLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYA 87
+S + AE R + + E+ A+NCR HSA LTDFGGVGDG TSNTKAF AI +LS+++
Sbjct: 14 FISFRGAESRKARILDSFEYSAINCRAHSASLTDFGGVGDGTTSNTKAFKDAIDHLSQFS 73
Query: 88 ADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEP 147
+DGG+QL VP GKWLTGSF+LTSHFTLY+HKDA+LLASQD EWP++ PLPSYGRGRD
Sbjct: 74 SDGGSQLFVPAGKWLTGSFSLTSHFTLYLHKDAVLLASQDMQEWPVMKPLPSYGRGRDAA 133
Query: 148 GGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQIS 207
GR+SSLIFGTNLTDV++TG N TI+GQG WW + K + TRPYLIE+MFSD +QIS
Sbjct: 134 AGRYSSLIFGTNLTDVIITGNNGTIDGQGAFWWQNFHKGKLKYTRPYLIEIMFSDTIQIS 193
Query: 208 NLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDC 267
NLTL++SPSWNVHPVYS ++L+QG+TI API SPNTDGINPDSCTNT+IED YIVSGDDC
Sbjct: 194 NLTLLNSPSWNVHPVYSRDILVQGITIIAPISSPNTDGINPDSCTNTKIEDCYIVSGDDC 253
Query: 268 VAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQ 327
VAVKSGWDEYGI GMPT+ L+IRRL CISP SA IALGSEMSGGI+DVRAEDITAI+T+
Sbjct: 254 VAVKSGWDEYGIAFGMPTKQLVIRRLTCISPYSATIALGSEMSGGIEDVRAEDITAIHTE 313
Query: 328 SGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYR 387
SGVRIKTAVGRG YVK+IYV+RMTM TMK+VFWMTG+YGSH D +DP ALP + GINYR
Sbjct: 314 SGVRIKTAVGRGGYVKDIYVKRMTMHTMKWVFWMTGNYGSHADKNYDPNALPLIQGINYR 373
Query: 388 DMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACE 447
DMVADNVT +A+L+GI DPF ICISNVTI L K K++ W CT I+G+TS V+P+ C+
Sbjct: 374 DMVADNVTMAARLEGIAGDPFKEICISNVTIGLAPKAKKVPWTCTEIEGMTSGVSPRPCD 433
Query: 448 LLPKKEP---TDCFFPDDKLPIDDVRLNTCSASIS 479
LLP + P T C FP + +PID V+ CS +S
Sbjct: 434 LLPDQGPEKITSCDFPPENIPIDLVQFKMCSFGMS 468
>gi|356522584|ref|XP_003529926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 498
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/474 (66%), Positives = 380/474 (80%), Gaps = 4/474 (0%)
Query: 12 LHPHVIKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTS 71
+ VI+++ LL L+S + E + + E+ ALNCR HSA LTDFGGVGDG TS
Sbjct: 25 MRVQVIRLVCALLLATLVSSEATERKAKIVDTSFEYNALNCRAHSASLTDFGGVGDGNTS 84
Query: 72 NTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEW 131
NTKAF +AIS LS+YA+ GGAQL VP GKWLTGSF++TSHFTLY++KDA+LLASQD +EW
Sbjct: 85 NTKAFQSAISYLSQYASKGGAQLYVPAGKWLTGSFSMTSHFTLYLNKDAVLLASQDMNEW 144
Query: 132 PLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVT 191
P++ PLPSYGRGRD P GR++S IFGTNLTDV+VTG N TI+GQG WW ++ K+ N T
Sbjct: 145 PVIKPLPSYGRGRDAPAGRYTSFIFGTNLTDVIVTGDNGTIDGQGAFWWQQFYNKRLNYT 204
Query: 192 RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSC 251
RPYLIE+MFSD +QISNLT ++SPSWNVHPVYSSN++I+GLTI AP+ SPNTDGINPDSC
Sbjct: 205 RPYLIELMFSDKIQISNLTFLNSPSWNVHPVYSSNIIIKGLTIIAPVPSPNTDGINPDSC 264
Query: 252 TNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSG 311
TNTRIED YIVSGDDCVAVKSGWDE+GIK G PT+ L+IRRL CISP SAAIALGSEMSG
Sbjct: 265 TNTRIEDCYIVSGDDCVAVKSGWDEFGIKFGWPTKQLVIRRLTCISPQSAAIALGSEMSG 324
Query: 312 GIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHP-D 370
GI+DVRAEDITAI+T+SGVRIKT++GRG YVK+IYVRRMTM TMK+ FWMTG+YGS+ +
Sbjct: 325 GIQDVRAEDITAIHTESGVRIKTSIGRGGYVKDIYVRRMTMHTMKWAFWMTGNYGSYANN 384
Query: 371 PGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWN 430
+DPKALP + GINYRD+VADNVT +A L+GI N PFTGICI+NVTI + +K E W
Sbjct: 385 SHYDPKALPEIKGINYRDVVADNVTMAATLEGISNSPFTGICIANVTISMADKANEKPWT 444
Query: 431 CTNIQGITSRVTPQACELLPKKEPTD---CFFPDDKLPIDDVRLNTCSASISKA 481
CT+I+GITS VTP+ C L K P C FP + LPID + L C+ +I A
Sbjct: 445 CTDIEGITSGVTPKPCNSLLDKGPEKIKTCDFPPEILPIDLLELKKCTYNIKHA 498
>gi|357443839|ref|XP_003592197.1| Endo-polygalacturonase-like protein [Medicago truncatula]
gi|355481245|gb|AES62448.1| Endo-polygalacturonase-like protein [Medicago truncatula]
Length = 475
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/465 (67%), Positives = 384/465 (82%), Gaps = 11/465 (2%)
Query: 15 HVIKILSTLLTLGLLSPQVAECR-PTK---NSYTIEFQALNCRKHSAVLTDFGGVGDGKT 70
+VI ++S +L L L AECR P+ NS+ ++ A+NCRKH+AVLTDFG VGDGKT
Sbjct: 15 YVICVISIVLILVSL----AECREPSSIKLNSF--DYHAINCRKHNAVLTDFGAVGDGKT 68
Query: 71 SNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESE 130
NTKAFN+AI+NLS+YA DGGAQLIVPPGKWLTGSFNLTSHFTL++ K A++LASQDESE
Sbjct: 69 LNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKGAVILASQDESE 128
Query: 131 WPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNV 190
WP L LPSYGR +D P GRFSSLIFGTNLTDVV+TG N TI+GQG WW K++KKQ +
Sbjct: 129 WPKLSFLPSYGREKDAPDGRFSSLIFGTNLTDVVITGNNGTIDGQGSTWWDKFQKKQLKI 188
Query: 191 TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDS 250
TRPY+IE+M+SD +QISNLTLI+SP+W VHP+YSSN++I LTI AP+D PNTDGI+PDS
Sbjct: 189 TRPYMIEIMYSDQIQISNLTLINSPNWFVHPIYSSNIIINRLTILAPVDVPNTDGIDPDS 248
Query: 251 CTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMS 310
CTN IEDNYIVSGDDC+A+KSG D YGIKVG P+Q +I+RRL CISP SA +ALGSEMS
Sbjct: 249 CTNVLIEDNYIVSGDDCIAIKSGLDGYGIKVGKPSQKIIVRRLTCISPKSAMVALGSEMS 308
Query: 311 GGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPD 370
GGI+D+R EDITAINT+S VRIKTAVGRGAYVK+I+V+ M + TMKYVFWMTG Y SH +
Sbjct: 309 GGIQDIRIEDITAINTESAVRIKTAVGRGAYVKDIFVKGMNLNTMKYVFWMTGAYKSHAE 368
Query: 371 PGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWN 430
GFDPKALP ++GINYRD++A NVT + +LDGI NDPFTGICISNVTI+++ + L WN
Sbjct: 369 NGFDPKALPKISGINYRDIIAKNVTIAGQLDGISNDPFTGICISNVTIEMSAQKNNLPWN 428
Query: 431 CTNIQGITSRVTPQACELLPKKEPTDCFFPDDKLPIDDVRLNTCS 475
CT++ G+ S P+ C++LP+K+ +C FP DKLPI++V+ TC+
Sbjct: 429 CTDVSGVASNAVPKPCDMLPEKK-IECPFPTDKLPIENVQFKTCN 472
>gi|357504351|ref|XP_003622464.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355497479|gb|AES78682.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 479
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/482 (66%), Positives = 386/482 (80%), Gaps = 7/482 (1%)
Query: 1 MEFCLKSRNNILHPHVIKILSTLLTLGLLSPQVAECRPTKN-SYTIEFQALNCRKHSAVL 59
ME KS I H +K++ LL + L+S +V ECR K S + E+ ALNCR HS L
Sbjct: 1 MELLWKSHMKI---HAMKLVYALLLVTLMSSKVTECRKGKIISTSFEYSALNCRAHSVSL 57
Query: 60 TDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKD 119
DFGGVGDGKTSNTKAF +AIS+LS+ A++GG+QL VP GKWLTGSF+L SHFTLY+HKD
Sbjct: 58 KDFGGVGDGKTSNTKAFKSAISHLSQNASEGGSQLYVPAGKWLTGSFSLISHFTLYLHKD 117
Query: 120 ALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPW 179
A+LLASQD +EWP++ PLPSYGRGRD GR +SLIFGTNLTDV+VTG N TI+GQG W
Sbjct: 118 AVLLASQDINEWPVIKPLPSYGRGRDAAAGRHTSLIFGTNLTDVIVTGDNGTIDGQGSFW 177
Query: 180 WIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPID 239
W ++ K+ TRPYLIE+MFSDN+QISNLTL+DSPSWN+HPVYSSN++I+G+TI API
Sbjct: 178 WQQFHNKKLKYTRPYLIELMFSDNIQISNLTLLDSPSWNIHPVYSSNIIIKGITIIAPIR 237
Query: 240 SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPD 299
SPNTDGINPDSCTNT+IED YIVSGDDCVAVKSGWDEYGIK G PT+ L+IRRL CISP
Sbjct: 238 SPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPY 297
Query: 300 SAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVF 359
SA IALGSEMSGGI+DVRAEDITA++T+SG+RIKTAVGRG YVK+IYV++MTM TMK+ F
Sbjct: 298 SATIALGSEMSGGIQDVRAEDITAVHTESGIRIKTAVGRGGYVKDIYVKKMTMHTMKWAF 357
Query: 360 WMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
W+TG+YGSH D ++ ALP + I+YRDMVADNV+ + L+GI NDPFTGICISNVTI
Sbjct: 358 WITGNYGSHADKNYNHSALPEIKNIHYRDMVADNVSMAGNLEGISNDPFTGICISNVTIT 417
Query: 420 LTEKPKELQWNCTNIQGITSRVTPQACELLP---KKEPTDCFFPDDKLPIDDVRLNTCSA 476
+ K K+ W C +I+GITS VTP+ C+LLP K+ DC FP D LPID + L C+
Sbjct: 418 MAAKAKKQPWTCNDIEGITSGVTPKPCDLLPEQGKENIRDCDFPSDYLPIDMLELKQCTY 477
Query: 477 SI 478
SI
Sbjct: 478 SI 479
>gi|224071986|ref|XP_002303605.1| predicted protein [Populus trichocarpa]
gi|222841037|gb|EEE78584.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/464 (66%), Positives = 380/464 (81%), Gaps = 9/464 (1%)
Query: 18 KILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFN 77
K+L L T+G+ E R + E+ A++CR HSA ++DFGGVGDG T NT+AF
Sbjct: 11 KVLVLLCTIGV------ESRKSSKWDCFEYAAVSCRAHSASVSDFGGVGDGTTVNTEAFQ 64
Query: 78 TAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPL 137
AI +LS+++++GG+ L VPPG+WLTGSFNLTS+FTLY+ KDA+LLASQDESE+PL+ PL
Sbjct: 65 AAIDHLSQFSSEGGSLLYVPPGRWLTGSFNLTSYFTLYLDKDAVLLASQDESEYPLIEPL 124
Query: 138 PSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIE 197
PSYGRGRD G R+SSLIFG NLTDV++TG N TI+GQGE WW K+R + N TRPYLIE
Sbjct: 125 PSYGRGRDADGARYSSLIFGNNLTDVIITGANGTIDGQGELWWTKFRAGELNHTRPYLIE 184
Query: 198 VMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIE 257
+MFS N+QISNLTLI+SPSWNVHPVY SNV++QGLTI AP+ SPNTDGINPDSCTNT+I+
Sbjct: 185 IMFSTNIQISNLTLINSPSWNVHPVYCSNVVVQGLTILAPVRSPNTDGINPDSCTNTKIQ 244
Query: 258 DNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVR 317
D YIVSGDDCVAVKSGWDEYGI GMPT+ ++IRRL CISP SA IALGSEMSGGI+DVR
Sbjct: 245 DCYIVSGDDCVAVKSGWDEYGIAFGMPTKQVVIRRLTCISPTSAVIALGSEMSGGIEDVR 304
Query: 318 AEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKA 377
AEDITAI+++SGVRIKTAVGRG YVK+IYVR MT+KTMK+VFWMTG+YGSHPD +DP A
Sbjct: 305 AEDITAIDSESGVRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMTGNYGSHPDNNYDPNA 364
Query: 378 LPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGI 437
+P + INYRD+VA+NVT +A+L+GI DPFTGICISNVTI L K+LQWNC+++ GI
Sbjct: 365 IPVIQNINYRDVVAENVTMAARLEGIAGDPFTGICISNVTIGLARNRKKLQWNCSDVAGI 424
Query: 438 TSRVTPQACELLPKKEPTD---CFFPDDKLPIDDVRLNTCSASI 478
TS VTP+ C+LL + P C +P+D LPI+++ + TCS+ +
Sbjct: 425 TSEVTPKPCDLLSDQGPGKIGACNYPEDNLPIENMEVQTCSSML 468
>gi|357509171|ref|XP_003624874.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
gi|355499889|gb|AES81092.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
Length = 476
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/471 (66%), Positives = 388/471 (82%), Gaps = 15/471 (3%)
Query: 8 RNNILHPHVIKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGD 67
R ++ +VI ++S +L G L AEC +++ A+NCRKHSAVLTDFGGVGD
Sbjct: 12 RWTLIEINVICVISIVLIFGSL----AECN-------LDYLAINCRKHSAVLTDFGGVGD 60
Query: 68 GKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQD 127
GKTSNTKAFNTAI+ LS+YA DGGAQLIVPPGKWLTGSFNLTSHFTL++ K A++L SQD
Sbjct: 61 GKTSNTKAFNTAITKLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKGAVILGSQD 120
Query: 128 ESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQ 187
ES+WP LPPLPSYGRGRD PG RFSSLIFGT+LTDV++TG N TI+GQG WW K+ KQ
Sbjct: 121 ESQWPQLPPLPSYGRGRDAPGPRFSSLIFGTHLTDVIITGNNGTIDGQGSYWWDKFHNKQ 180
Query: 188 FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGIN 247
+TRPY+IE+++SD +QISNLTLI+SPSW VHP YSSN++I+GLTI AP+DSPNTDGI+
Sbjct: 181 LKITRPYMIEILYSDQIQISNLTLINSPSWFVHPTYSSNIIIKGLTILAPVDSPNTDGID 240
Query: 248 PDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGS 307
PDS TN RIEDNYIVSGDDC+A+KSGWD+YGIK G P++ +IIRRL CISPDSA IALGS
Sbjct: 241 PDSSTNVRIEDNYIVSGDDCIAIKSGWDQYGIKFGKPSKQIIIRRLTCISPDSAMIALGS 300
Query: 308 EMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKT-MKYVFWMTGDYG 366
EMSGGI++VR ED+TAINT+S VRIK+AVGRG YVK+I+V+ + + T ++YVFW+TG YG
Sbjct: 301 EMSGGIENVRVEDVTAINTESAVRIKSAVGRGGYVKDIFVKGVKLNTILRYVFWLTGSYG 360
Query: 367 SHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKE 426
HPD GFDPKALP +TGI +RD++A NVT + +L+GI NDPFTGICISNVTI+L+E K+
Sbjct: 361 DHPDNGFDPKALPKITGIIFRDVIAKNVTVAGQLEGISNDPFTGICISNVTIELSELKKK 420
Query: 427 LQ--WNCTNIQGITSRVTPQACELLPKKEPTDCFFPDDKLPIDDVRLNTCS 475
+ WNCT++ G+TS V P+ C+LL +K+ +C FP DKL I+DV+ TC+
Sbjct: 421 KKLPWNCTDVSGVTSNVVPKPCDLLSEKK-IECPFPTDKLAIEDVQFKTCN 470
>gi|255541678|ref|XP_002511903.1| polygalacturonase, putative [Ricinus communis]
gi|223549083|gb|EEF50572.1| polygalacturonase, putative [Ricinus communis]
Length = 472
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/481 (64%), Positives = 378/481 (78%), Gaps = 15/481 (3%)
Query: 1 MEFCLKSRNNILHPHVIKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLT 60
ME L S + P V ++S + L LLS + AE R + + E+ A++CR HSA +T
Sbjct: 1 MELLLISS---IKPRVTNVISVFVILALLSARGAESRKARVLDSFEYNAISCRAHSASIT 57
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDA 120
DFGGVGDG TSNTKAF AI++LS+YA DGG+QL VP GKWLTGSF+LTSHFTL++HKDA
Sbjct: 58 DFGGVGDGITSNTKAFQDAIAHLSQYATDGGSQLFVPAGKWLTGSFSLTSHFTLFLHKDA 117
Query: 121 LLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW 180
+LL SQD EWPLL PLPSYGRGRD GR+SSLIFGTNLTD++VTG N TI+GQG WW
Sbjct: 118 VLLGSQDLKEWPLLKPLPSYGRGRDAAAGRYSSLIFGTNLTDIIVTGNNGTIDGQGAFWW 177
Query: 181 IKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDS 240
+++K + TRPYLIE+M+SDN+QISNLTL++SPSWNVHPVYSSN+LIQG+TI AP+ S
Sbjct: 178 QQFKKGKLKYTRPYLIEIMYSDNIQISNLTLLNSPSWNVHPVYSSNILIQGITIIAPVTS 237
Query: 241 PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS 300
PNTDGINPD YI+SGDDCVAVKSGWDEYGI GMPT+ L+IRRL CISP S
Sbjct: 238 PNTDGINPDC---------YIISGDDCVAVKSGWDEYGIAFGMPTKQLVIRRLTCISPYS 288
Query: 301 AAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFW 360
A IALGSEMSGGI+DVRAEDITAI+T+SGVRIKTAVGRG YVK+IYV+RMTM TMK+ FW
Sbjct: 289 ATIALGSEMSGGIQDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWAFW 348
Query: 361 MTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKL 420
MTG+YGSH D +DP ALP + GINYRDMVADNV+ +A+L+GI DPF ICISNVTI +
Sbjct: 349 MTGNYGSHADKNYDPNALPVIEGINYRDMVADNVSMAARLEGISGDPFKQICISNVTIGM 408
Query: 421 TEKPKELQWNCTNIQGITSRVTPQACELLPKKEP---TDCFFPDDKLPIDDVRLNTCSAS 477
K K++ W CT+I+GIT+ V+P+ C+LLP + P T C FP + +PID V+ C+ S
Sbjct: 409 AAKAKKIPWTCTDIEGITTGVSPRPCDLLPDQGPEKLTACDFPPENIPIDSVQFQKCTYS 468
Query: 478 I 478
+
Sbjct: 469 M 469
>gi|223635599|sp|A7PZL3.1|PGLR_VITVI RecName: Full=Probable polygalacturonase; Short=PG; AltName:
Full=Pectinase
Length = 491
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/449 (67%), Positives = 364/449 (81%), Gaps = 3/449 (0%)
Query: 34 AECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQ 93
ECR + +E+ A++CR HSA L DFGGVGDG+T NTKAF A+S LSKY ++GGAQ
Sbjct: 40 GECRKGRILEALEYSAISCRAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQ 99
Query: 94 LIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSS 153
L VP GKWLTGSF+LTSHFTL++H+DA+LLASQD S+WP++ PLPSYGRGRD GR++S
Sbjct: 100 LYVPAGKWLTGSFSLTSHFTLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTS 159
Query: 154 LIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLID 213
LIFGTNLTDV++TG N TI+GQG WW ++ + TRPYLIE+M+S ++QISNLTL++
Sbjct: 160 LIFGTNLTDVIITGDNGTIDGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLN 219
Query: 214 SPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSG 273
SPSWNVHPVYS N+LIQG+TI AP+ SPNTDGINPDSCTNTRIED YIVSGDDCVAVKSG
Sbjct: 220 SPSWNVHPVYSRNILIQGITILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 279
Query: 274 WDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIK 333
WDEYGI GMPT+ L+IRRL CISP SA IALGSEMSGGI+DVRAEDI AIN++SG+RIK
Sbjct: 280 WDEYGIAYGMPTKQLVIRRLTCISPYSAVIALGSEMSGGIQDVRAEDIVAINSESGIRIK 339
Query: 334 TAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADN 393
T +GRG YVK+IYVR MTMKTMK+ FWMTG+YGSH D +DPKA P + GINYRDMVA+N
Sbjct: 340 TGIGRGGYVKDIYVRGMTMKTMKWAFWMTGNYGSHADNHYDPKAFPVIQGINYRDMVAEN 399
Query: 394 VTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKE 453
V+ +A+L+GI +DPFTGICISNVTI L K K++ W CT+++GI+S VTP C LP +
Sbjct: 400 VSMAARLEGIPSDPFTGICISNVTIHLAAKAKKVPWTCTDVEGISSGVTPTPCSTLPDQG 459
Query: 454 PTD---CFFPDDKLPIDDVRLNTCSASIS 479
P C FP + LPID V L CS I+
Sbjct: 460 PEKTSLCNFPAESLPIDTVELQKCSYGIN 488
>gi|359489656|ref|XP_003633958.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 479
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/449 (67%), Positives = 364/449 (81%), Gaps = 3/449 (0%)
Query: 34 AECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQ 93
ECR + +E+ A++CR HSA L DFGGVGDG+T NTKAF A+S LSKY ++GGAQ
Sbjct: 28 GECRKGRILEALEYSAISCRAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQ 87
Query: 94 LIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSS 153
L VP GKWLTGSF+LTSHFTL++H+DA+LLASQD S+WP++ PLPSYGRGRD GR++S
Sbjct: 88 LYVPAGKWLTGSFSLTSHFTLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTS 147
Query: 154 LIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLID 213
LIFGTNLTDV++TG N TI+GQG WW ++ + TRPYLIE+M+S ++QISNLTL++
Sbjct: 148 LIFGTNLTDVIITGDNGTIDGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLN 207
Query: 214 SPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSG 273
SPSWNVHPVYS N+LIQG+TI AP+ SPNTDGINPDSCTNTRIED YIVSGDDCVAVKSG
Sbjct: 208 SPSWNVHPVYSRNILIQGITILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 267
Query: 274 WDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIK 333
WDEYGI GMPT+ L+IRRL CISP SA IALGSEMSGGI+DVRAEDI AIN++SG+RIK
Sbjct: 268 WDEYGIAYGMPTKQLVIRRLTCISPYSAVIALGSEMSGGIQDVRAEDIVAINSESGIRIK 327
Query: 334 TAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADN 393
T +GRG YVK+IYVR MTMKTMK+ FWMTG+YGSH D +DPKA P + GINYRDMVA+N
Sbjct: 328 TGIGRGGYVKDIYVRGMTMKTMKWAFWMTGNYGSHADNHYDPKAFPVIQGINYRDMVAEN 387
Query: 394 VTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKE 453
V+ +A+L+GI +DPFTGICISNVTI L K K++ W CT+++GI+S VTP C LP +
Sbjct: 388 VSMAARLEGIPSDPFTGICISNVTIHLAAKAKKVPWTCTDVEGISSGVTPTPCSTLPDQG 447
Query: 454 PTD---CFFPDDKLPIDDVRLNTCSASIS 479
P C FP + LPID V L CS I+
Sbjct: 448 PEKTSLCNFPAESLPIDTVELQKCSYGIN 476
>gi|449456478|ref|XP_004145976.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 480
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/456 (66%), Positives = 371/456 (81%), Gaps = 1/456 (0%)
Query: 20 LSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTA 79
+S ++ L LLS E + + + ++ A++CRKH+A++TDFGGVGDG TSNT+AF A
Sbjct: 17 ISAVILLALLSLATVEGKRSCPTNYLQVPAISCRKHTALITDFGGVGDGVTSNTQAFRRA 76
Query: 80 ISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPS 139
I +LS AADGGAQL VPPGKWLTGSFNLTSHFTL++HKDA +L SQ+ESEWP + LPS
Sbjct: 77 IEHLSSLAADGGAQLTVPPGKWLTGSFNLTSHFTLFVHKDAKILGSQNESEWPQVALLPS 136
Query: 140 YGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVM 199
YG GRD PGGR+SSLIFGTNLTDVV+TG N TI+GQG WW K+ K + N+TRPYLIE+M
Sbjct: 137 YGVGRDAPGGRYSSLIFGTNLTDVVITGNNGTIDGQGAYWWDKFHKGELNLTRPYLIEIM 196
Query: 200 FSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDN 259
+SD +QIS+LTL++SPSW VHP+YS NV+IQGLTI APIDSPNTDGI+PDSC+NTRIED
Sbjct: 197 YSDQIQISDLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNTDGIDPDSCSNTRIEDC 256
Query: 260 YIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAE 319
+IVSGDDC+AVKSGWD+YGIK GMPT+ L+I+RL CISPDSA +ALGSEMSGGI++VR E
Sbjct: 257 FIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIKRLTCISPDSAGVALGSEMSGGIRNVRIE 316
Query: 320 DITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALP 379
+ T INTQS VRIKTA GRG +VK+I+VR M + TMKYVFWMTG+Y SHPD FDP ALP
Sbjct: 317 NFTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKSHPDDKFDPAALP 376
Query: 380 TVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITS 439
+T INYRD+VA+NVT SA+L+GI DPFT ICISNV I LT PK+LQWNCT+++G +S
Sbjct: 377 EITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTATPKKLQWNCTDVEGFSS 436
Query: 440 RVTPQACELLPKK-EPTDCFFPDDKLPIDDVRLNTC 474
V P C L K + C FP+D+LPI+ V+L TC
Sbjct: 437 DVVPPPCAPLAKAGKSGGCDFPEDQLPIERVQLKTC 472
>gi|449432134|ref|XP_004133855.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 299/440 (67%), Positives = 360/440 (81%), Gaps = 3/440 (0%)
Query: 45 IEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTG 104
IE+ A++CR H+A +T+FGGVGDG TSNTKAF A+ LS+Y DGGAQL VP GKWLTG
Sbjct: 54 IEYGAISCRAHTASITEFGGVGDGVTSNTKAFQAAVEQLSQYTDDGGAQLYVPAGKWLTG 113
Query: 105 SFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVV 164
SFNLTSHFTL++H+DA+LLASQD +EWP++ PLPSYG GRD GGR+ SLIFGTNLTDVV
Sbjct: 114 SFNLTSHFTLFLHQDAVLLASQDPNEWPVVEPLPSYGHGRDTSGGRYISLIFGTNLTDVV 173
Query: 165 VTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYS 224
+TG N TI+GQG+ WW + + + TRPYLIE+M+S ++QIS+LTL++SP+WNVHPVYS
Sbjct: 174 ITGNNGTIDGQGDRWWQLFHQGKLKYTRPYLIELMYSSDIQISSLTLLNSPAWNVHPVYS 233
Query: 225 SNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMP 284
SN+LIQG+TI AP+ SPNTDGINPDSCTN RIED YIVSGDDCVAVKSGWDEYGI G+P
Sbjct: 234 SNILIQGITIIAPVRSPNTDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGISFGLP 293
Query: 285 TQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKE 344
T+ L++RRL CISP SA IALGSEMSGGI+DVRAEDI AI+++SGVRIKT +GRG YVK+
Sbjct: 294 TKQLVVRRLTCISPTSAVIALGSEMSGGIEDVRAEDIVAIDSESGVRIKTGIGRGGYVKD 353
Query: 345 IYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIR 404
IYVRRMTM TMK+ FWMTGDYGSH D +DP ALP + GINY+DMV +N T +A+L+GI
Sbjct: 354 IYVRRMTMHTMKWAFWMTGDYGSHADKNYDPHALPVIQGINYKDMVVENATMAARLEGIS 413
Query: 405 NDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLP---KKEPTDCFFPD 461
D FT ICISNVTI L K K+ W CT+I+GITS+VTP C+LLP +++ T C FP+
Sbjct: 414 GDTFTDICISNVTIGLAPKAKKQPWTCTDIEGITSQVTPPPCDLLPDQGEEKITTCKFPE 473
Query: 462 DKLPIDDVRLNTCSASISKA 481
D LPID V+L CS S A
Sbjct: 474 DNLPIDSVQLKKCSYQFSHA 493
>gi|449530307|ref|XP_004172137.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 299/440 (67%), Positives = 360/440 (81%), Gaps = 3/440 (0%)
Query: 45 IEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTG 104
IE+ A++CR H+A +T+FGGVGDG TSNTKAF A+ LS+Y DGGAQL VP GKWLTG
Sbjct: 54 IEYGAISCRAHTASITEFGGVGDGVTSNTKAFQAAVEQLSQYTDDGGAQLYVPAGKWLTG 113
Query: 105 SFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVV 164
SFNLTSHFTL++H+DA+LLASQD +EWP++ PLPSYG GRD GGR+ SLIFGTNLTDVV
Sbjct: 114 SFNLTSHFTLFLHQDAVLLASQDPNEWPVVEPLPSYGHGRDTSGGRYISLIFGTNLTDVV 173
Query: 165 VTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYS 224
+TG N TI+GQG+ WW + + + TRPYLIE+M+S ++QIS+LTL++SP+WNVHPVYS
Sbjct: 174 ITGNNGTIDGQGDRWWQLFHQGKLKYTRPYLIELMYSSDIQISSLTLLNSPAWNVHPVYS 233
Query: 225 SNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMP 284
SN+LIQG+TI AP+ SPNTDGINPDSCTN RIED YIVSGDDCVAVKSGWDEYGI G+P
Sbjct: 234 SNILIQGITIIAPVRSPNTDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGISFGLP 293
Query: 285 TQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKE 344
T+ L++RRL CISP SA IALGSEMSGGI+DVRAEDI AI+++SGVRIKT +GRG YVK+
Sbjct: 294 TKQLVVRRLTCISPTSAVIALGSEMSGGIEDVRAEDIVAIDSESGVRIKTGIGRGGYVKD 353
Query: 345 IYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIR 404
IYVRRMTM TMK+ FWMTGDYGSH D +DP ALP + GINY+DMV +N T +A+L+GI
Sbjct: 354 IYVRRMTMHTMKWAFWMTGDYGSHADKNYDPHALPVIQGINYKDMVVENATMAARLEGIS 413
Query: 405 NDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLP---KKEPTDCFFPD 461
D FT ICISNVTI L K K+ W CT+I+GITS+VTP C+LLP +++ T C FP+
Sbjct: 414 GDTFTDICISNVTIGLAPKAKKQPWTCTDIEGITSQVTPPPCDLLPDQGEEKITTCKFPE 473
Query: 462 DKLPIDDVRLNTCSASISKA 481
D LPID V+L CS S A
Sbjct: 474 DNLPIDSVQLKKCSYQFSHA 493
>gi|449497436|ref|XP_004160401.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Cucumis sativus]
Length = 480
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/456 (66%), Positives = 370/456 (81%), Gaps = 1/456 (0%)
Query: 20 LSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTA 79
+S ++ L LLS E + + + ++ A++CRKH+A++TDFGGVGDG TSNT+AF A
Sbjct: 17 ISAVILLALLSLATVEGKRSCPTNYLQVPAISCRKHTALITDFGGVGDGVTSNTQAFRRA 76
Query: 80 ISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPS 139
I +LS AADGGAQL VP GKWLTGSFNLTSHFTL++HKDA +L SQ+ESEWP + LPS
Sbjct: 77 IEHLSSLAADGGAQLTVPXGKWLTGSFNLTSHFTLFVHKDAKILGSQNESEWPQVALLPS 136
Query: 140 YGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVM 199
YG GRD PGGR+SSLIFGTNLTDVV+TG N TI+GQG WW K+ K + N+TRPYLIE+M
Sbjct: 137 YGVGRDAPGGRYSSLIFGTNLTDVVITGNNGTIDGQGAYWWDKFHKGELNLTRPYLIEIM 196
Query: 200 FSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDN 259
+SD +QIS+LTL++SPSW VHP+YS NV+IQGLTI APIDSPNTDGI+PDSC+NTRIED
Sbjct: 197 YSDQIQISDLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNTDGIDPDSCSNTRIEDC 256
Query: 260 YIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAE 319
+IVSGDDC+AVKSGWD+YGIK GMPT+ L+I+RL CISPDSA +ALGSEMSGGI++VR E
Sbjct: 257 FIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIKRLTCISPDSAGVALGSEMSGGIRNVRIE 316
Query: 320 DITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALP 379
+ T INTQS VRIKTA GRG +VK+I+VR M + TMKYVFWMTG+Y SHPD FDP ALP
Sbjct: 317 NFTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKSHPDDKFDPAALP 376
Query: 380 TVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITS 439
+T INYRD+VA+NVT SA+L+GI DPFT ICISNV I LT PK+LQWNCT+++G +S
Sbjct: 377 EITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTATPKKLQWNCTDVEGFSS 436
Query: 440 RVTPQACELLPKK-EPTDCFFPDDKLPIDDVRLNTC 474
V P C L K + C FP+D+LPI+ V+L TC
Sbjct: 437 DVVPPPCAPLAKAGKSGGCDFPEDQLPIERVQLKTC 472
>gi|357507519|ref|XP_003624048.1| Polygalacturonase [Medicago truncatula]
gi|355499063|gb|AES80266.1| Polygalacturonase [Medicago truncatula]
Length = 483
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/468 (66%), Positives = 374/468 (79%), Gaps = 4/468 (0%)
Query: 15 HVIKILSTLLTLGLLSPQVAECRPTK-NSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNT 73
+I+I + + L+ P+ E R K + + + +NCR HSA LTDFGGVGDG TSNT
Sbjct: 12 QMIQIFLAIFVVTLVYPERVESRKAKIVTTSFVYNGINCRAHSASLTDFGGVGDGNTSNT 71
Query: 74 KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPL 133
KAF +AIS+LS+Y + GG+QL VP GKWLTGSF+LTSHFTLY+ +DA+LLASQD +EWP+
Sbjct: 72 KAFQSAISHLSQYGSQGGSQLYVPAGKWLTGSFSLTSHFTLYLDRDAVLLASQDITEWPV 131
Query: 134 LPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRP 193
L PLPSYGRGRD P GRF SLIFGTNLTDV+VTGGN TI+GQG WW ++ +K+ TRP
Sbjct: 132 LEPLPSYGRGRDAPAGRFRSLIFGTNLTDVIVTGGNGTIDGQGAFWWQQFHRKKLKYTRP 191
Query: 194 YLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTN 253
YLIE+MFSD++QISNLTL++SPSWNVHPVYSSN++IQG+TI API SPNTDGINPDSCTN
Sbjct: 192 YLIELMFSDSIQISNLTLLNSPSWNVHPVYSSNIIIQGITIIAPISSPNTDGINPDSCTN 251
Query: 254 TRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGI 313
T+IED YIVSGDDCVAVKSGWDEYGIK G PT+ L+IRRL CISP SA IALGSEMSGGI
Sbjct: 252 TKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPFSATIALGSEMSGGI 311
Query: 314 KDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGF 373
+DVRAEDITAI T+SGVRIKTAVGRG YVK+IYV+R TM TMK+ F MTGDY SH D F
Sbjct: 312 QDVRAEDITAIRTESGVRIKTAVGRGGYVKDIYVKRFTMHTMKWAFKMTGDYNSHADTHF 371
Query: 374 DPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTN 433
DP ALP + INYRD+VA+NVT +A+ GI NDPF GICI+NVT+ + K K+ W CT+
Sbjct: 372 DPNALPEIANINYRDVVAENVTIAARFQGISNDPFKGICIANVTLGMAVKAKKRSWTCTD 431
Query: 434 IQGITSRVTPQACELLPKKEPTD---CFFPDDKLPIDDVRLNTCSASI 478
I+G+TS VTP C+LLP + P C FP + LPID++ L CS S+
Sbjct: 432 IEGMTSGVTPPPCDLLPDQGPEKIGACDFPAESLPIDNLELKKCSYSM 479
>gi|186701252|gb|ACC91278.1| glycoside hydrolase family 28 protein [Capsella rubella]
Length = 494
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 294/433 (67%), Positives = 360/433 (83%), Gaps = 3/433 (0%)
Query: 45 IEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTG 104
E+ A++CR +SA L +FG VGDG TSNTKAF A+S LS++ GG+ L VP G+WLTG
Sbjct: 55 FEYSAISCRAYSASLDEFGAVGDGVTSNTKAFRDAVSQLSRFEDYGGSLLFVPAGRWLTG 114
Query: 105 SFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVV 164
+FNLTSHFTL++H+DA++LASQ+ES++ ++ PLPSYGRGRD GGRF SL+FG+NLTDVV
Sbjct: 115 NFNLTSHFTLFLHRDAVILASQEESDYEVIEPLPSYGRGRDTDGGRFISLLFGSNLTDVV 174
Query: 165 VTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYS 224
+TG N TI+GQGEPWW K+++ + TRPYLIE+M SD +QISNLT ++SPSW++HPVYS
Sbjct: 175 ITGENGTIDGQGEPWWGKFKRGELKYTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPVYS 234
Query: 225 SNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMP 284
N+ IQGLTI AP+ PNTDGINPDSCTNTRIED YIVSGDDC+AVKSGWD+YGI GMP
Sbjct: 235 RNIFIQGLTILAPVTVPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGIAYGMP 294
Query: 285 TQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKE 344
T+ L+IRRL CISPDSA IALGSEMSGGI+DVRAEDI AI+++SG+RIKTA+GRG YVK+
Sbjct: 295 TKQLLIRRLTCISPDSAVIALGSEMSGGIEDVRAEDIVAIDSESGIRIKTAIGRGGYVKD 354
Query: 345 IYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIR 404
+YVR MTMKTMKYVFWMTG YGSHPD +DPKALP + INY+DMVA+NVT A+L GI
Sbjct: 355 VYVRGMTMKTMKYVFWMTGSYGSHPDEHYDPKALPVIQNINYQDMVAENVTMPAQLAGIS 414
Query: 405 NDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEP---TDCFFPD 461
D FTGICISNVTI L++KPK++ WNCT++ G TS VTP C+LLP+K+P C FPD
Sbjct: 415 GDQFTGICISNVTITLSKKPKKVLWNCTDVSGYTSGVTPAPCQLLPEKQPGTVVPCNFPD 474
Query: 462 DKLPIDDVRLNTC 474
D +PID+V+L C
Sbjct: 475 DPIPIDEVKLQRC 487
>gi|224077474|ref|XP_002305262.1| predicted protein [Populus trichocarpa]
gi|222848226|gb|EEE85773.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/436 (70%), Positives = 360/436 (82%), Gaps = 4/436 (0%)
Query: 45 IEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTG 104
+E++A+NCRKHSAVLTDFG VGDGKTSNTKAF AI LSKYA DGGAQLIVP GKWLTG
Sbjct: 2 VEYKAINCRKHSAVLTDFGAVGDGKTSNTKAFAEAIKKLSKYAPDGGAQLIVPAGKWLTG 61
Query: 105 SFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEP-GGRFSSLIFGTNLTDV 163
SFNLTSHFTL++HKDA+LLASQDE EWPLL PLPSYG R+ GR LIF +N+TDV
Sbjct: 62 SFNLTSHFTLFLHKDAVLLASQDEDEWPLLTPLPSYGGVRENAVFGRPGGLIFASNVTDV 121
Query: 164 VVTGGNATINGQGEPWWIKYRKKQFN-VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPV 222
++TG N T++GQG WW K+ +K+ + RPYLIE+M+SD VQISN+TLI+SP W+VHP+
Sbjct: 122 IITGNNGTVDGQGAVWWEKFNEKKLKKLERPYLIEIMYSDQVQISNITLINSPQWHVHPI 181
Query: 223 YSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVG 282
YSSN+ IQG+TI AP+D PNTDGINPDSCTN IED YIVSGDDC+AVKSG D+YGIKVG
Sbjct: 182 YSSNLWIQGVTILAPVDVPNTDGINPDSCTNVIIEDCYIVSGDDCIAVKSGLDQYGIKVG 241
Query: 283 MPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYV 342
MP + L+IRR+ CISP SAAIALGSEMSGGI+DVR EDITAINT+S VR+KTAVGRG YV
Sbjct: 242 MPMKQLVIRRITCISPKSAAIALGSEMSGGIEDVRIEDITAINTESAVRVKTAVGRGGYV 301
Query: 343 KEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDG 402
K+I+VRRMT+KTMKYVFWM G Y SH D G+DPKALP +T IN+RD+ ADNVT KL+G
Sbjct: 302 KDIFVRRMTLKTMKYVFWMIGSYSSHADEGYDPKALPEITNINFRDIAADNVTIPGKLEG 361
Query: 403 I-RNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTDCFFPD 461
+ +PFTGICISNVT+ L EK KE WNCT++ G++S VTP C LPKK DC FP+
Sbjct: 362 LGEGNPFTGICISNVTMTLAEKHKEPAWNCTDVSGVSSNVTPMPCAALPKKS-MDCPFPE 420
Query: 462 DKLPIDDVRLNTCSAS 477
DKLPI+ VRL TCSA+
Sbjct: 421 DKLPIEKVRLQTCSAT 436
>gi|388509890|gb|AFK43011.1| unknown [Medicago truncatula]
Length = 483
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/468 (66%), Positives = 374/468 (79%), Gaps = 4/468 (0%)
Query: 15 HVIKILSTLLTLGLLSPQVAECRPTK-NSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNT 73
+I+I + + L+ P+ E R K + + + +NCR HSA LTDFGGVGDG TSNT
Sbjct: 12 QMIQIFLAIFVVTLVYPERVESRKAKIVTTSFVYNGINCRAHSASLTDFGGVGDGNTSNT 71
Query: 74 KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPL 133
KAF +AIS+LS+Y + GG+QL VP GKWLTGSF+LTSHFTLY+ +DA+LLASQD +EWP+
Sbjct: 72 KAFQSAISHLSQYGSQGGSQLYVPAGKWLTGSFSLTSHFTLYLDRDAVLLASQDITEWPV 131
Query: 134 LPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRP 193
L PLPSYGRGRD P GRF SLIFGTNLTDV+VTGGN TI+GQG WW ++ +K+ TRP
Sbjct: 132 LEPLPSYGRGRDAPAGRFRSLIFGTNLTDVIVTGGNGTIDGQGAFWWQQFHRKELKYTRP 191
Query: 194 YLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTN 253
YLIE+MFSD++QISNLTL++SPSWNVHPVYSSN++IQG+TI API SPNTDGINPDSCTN
Sbjct: 192 YLIELMFSDSIQISNLTLLNSPSWNVHPVYSSNIIIQGITIIAPISSPNTDGINPDSCTN 251
Query: 254 TRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGI 313
T+IED YIVSGDDCVAVKSGWDEYGIK G PT+ L+IRRL CISP SA IALGSEMSGGI
Sbjct: 252 TKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPFSATIALGSEMSGGI 311
Query: 314 KDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGF 373
+DVRAEDITAI T+SGVRIKTAVGRG YVK+IYV+R TM TMK+ F MTGDY SH D F
Sbjct: 312 QDVRAEDITAIRTESGVRIKTAVGRGGYVKDIYVKRFTMHTMKWAFKMTGDYNSHADTHF 371
Query: 374 DPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTN 433
DP ALP + INYRD+VA+NVT +A+ GI NDPF GICI+NVT+ + K K+ W CT+
Sbjct: 372 DPNALPEIANINYRDVVAENVTIAARFQGIFNDPFKGICIANVTLGMAVKAKKRSWTCTD 431
Query: 434 IQGITSRVTPQACELLPKKEPTD---CFFPDDKLPIDDVRLNTCSASI 478
I+G+TS VTP C+LLP + P C FP + LPID++ L CS S+
Sbjct: 432 IEGMTSGVTPPPCDLLPDQGPEKIGACDFPAESLPIDNLELKKCSYSM 479
>gi|15236514|ref|NP_194081.1| putative polygalacturonase [Arabidopsis thaliana]
gi|3451075|emb|CAA20471.1| putative protein [Arabidopsis thaliana]
gi|7269198|emb|CAB79305.1| putative protein [Arabidopsis thaliana]
gi|23296346|gb|AAN13048.1| unknown protein [Arabidopsis thaliana]
gi|62320484|dbj|BAD95012.1| hypothetical protein [Arabidopsis thaliana]
gi|332659368|gb|AEE84768.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 495
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 295/433 (68%), Positives = 361/433 (83%), Gaps = 3/433 (0%)
Query: 45 IEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTG 104
E+ A++CR +SA L +FG VGDG TSNT AF A+S LS++A GG+ L VP G+WLTG
Sbjct: 56 FEYSAISCRAYSASLDEFGAVGDGVTSNTAAFRDAVSQLSRFADYGGSLLFVPAGRWLTG 115
Query: 105 SFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVV 164
+FNLTSHFTL++H+DA++LASQ+ES++ ++ PLPSYGRGRD GGRF SL+FG+NLTDVV
Sbjct: 116 NFNLTSHFTLFLHRDAVILASQEESDYEVIEPLPSYGRGRDTDGGRFISLLFGSNLTDVV 175
Query: 165 VTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYS 224
+TG N TI+GQGEPWW K+++ + TRPYLIE+M SD +QISNLT ++SPSW++HPVYS
Sbjct: 176 ITGENGTIDGQGEPWWGKFKRGELKYTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPVYS 235
Query: 225 SNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMP 284
SN+ IQGLTI AP+ PNTDGINPDSCTNTRIED YIVSGDDC+AVKSGWD+YGI GMP
Sbjct: 236 SNIYIQGLTILAPVTVPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGINYGMP 295
Query: 285 TQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKE 344
T+ L+IRRL CISPDSA IALGSEMSGGI+DVRAEDI AIN++SG+RIKTA+GRG YVK+
Sbjct: 296 TKQLLIRRLTCISPDSAVIALGSEMSGGIEDVRAEDIVAINSESGIRIKTAIGRGGYVKD 355
Query: 345 IYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIR 404
+YVR MTM TMKYVFWMTG YGSHPD +DPKALP + INY+DMVA+NVT A+L GI
Sbjct: 356 VYVRGMTMMTMKYVFWMTGSYGSHPDDHYDPKALPVIQNINYQDMVAENVTMPAQLAGIS 415
Query: 405 NDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEP---TDCFFPD 461
D FTGICISNVTI L++KPK++ WNCT++ G TS VTPQ C+LLP+K+P C FP+
Sbjct: 416 GDQFTGICISNVTITLSKKPKKVLWNCTDVSGYTSGVTPQPCQLLPEKQPGTVVPCNFPE 475
Query: 462 DKLPIDDVRLNTC 474
D +PID+V+L C
Sbjct: 476 DPIPIDEVKLQRC 488
>gi|297817470|ref|XP_002876618.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322456|gb|EFH52877.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 298/473 (63%), Positives = 373/473 (78%), Gaps = 8/473 (1%)
Query: 15 HVIKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTK 74
+++ + T++TL L R ++ T E+ A+ CR HSA +T++GGVGDGKT NTK
Sbjct: 3 NILACIVTIITLSNLITTSQGRRVLQSFETFEYTAITCRSHSASITEYGGVGDGKTLNTK 62
Query: 75 AFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLL 134
AF +A+ +LS+Y++DGGAQL VP GKWLTGSFNLTSHFTL++HKDA+LLA+QD +E+P+L
Sbjct: 63 AFQSAVDHLSQYSSDGGAQLFVPAGKWLTGSFNLTSHFTLFLHKDAILLAAQDLNEYPIL 122
Query: 135 PPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPY 194
LPSYGRGRD GGRF+SL FGTNL+DV++TG N TI+GQG WW K+ + TRPY
Sbjct: 123 KALPSYGRGRDAAGGRFASLFFGTNLSDVIITGNNGTIDGQGSFWWQKFHGGKLKYTRPY 182
Query: 195 LIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNT 254
LIE+MFSD +QISNLT +DSPSWN+HPVYSSN++++G+TI AP+ SPNTDGINPDSCTNT
Sbjct: 183 LIELMFSDTIQISNLTFLDSPSWNIHPVYSSNIIVKGVTIIAPVKSPNTDGINPDSCTNT 242
Query: 255 RIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIK 314
RIED YI+SGDDC+AVKSGWDEYGI GMPT+HL+IRRL CISP SAAIALGSEMSGGI+
Sbjct: 243 RIEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIRRLTCISPYSAAIALGSEMSGGIE 302
Query: 315 DVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFD 374
DVRAEDITA T+SGVRIKTAVGRGA+VK IYV+ M + TMK+VFWMTG+Y +H D +D
Sbjct: 303 DVRAEDITAYQTESGVRIKTAVGRGAFVKNIYVKGMNLHTMKWVFWMTGNYKAHADSHYD 362
Query: 375 PKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNI 434
P ALP +TGINYRD+VA+NV+ + +L+GI DPFTGICISN TI + K K+ W C+++
Sbjct: 363 PHALPEITGINYRDIVAENVSMAGRLEGISGDPFTGICISNATISMAAKHKKAIWMCSDV 422
Query: 435 QGITSRVTPQACELLPKKEPT--------DCFFPDDKLPIDDVRLNTCSASIS 479
+G+TS V P+ C+LL +E C FP D L ID+V L TCS +S
Sbjct: 423 EGVTSGVDPKPCDLLDGQESETKKKMIDGGCDFPTDVLEIDNVELKTCSYQMS 475
>gi|297803786|ref|XP_002869777.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315613|gb|EFH46036.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 494
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 294/433 (67%), Positives = 359/433 (82%), Gaps = 3/433 (0%)
Query: 45 IEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTG 104
E+ A++CR +SA L +FG VGDG TSNT AF A+S LS++A GG+ L VP G+WLTG
Sbjct: 55 FEYSAISCRAYSASLDEFGAVGDGVTSNTAAFRDAVSQLSRFADYGGSLLFVPAGRWLTG 114
Query: 105 SFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVV 164
SFNLTSHFTL++H+DA++LASQ+ES++ ++ PLPSYGRGRD GGRF SL+FG+NLTDVV
Sbjct: 115 SFNLTSHFTLFLHRDAVILASQEESDYEVIEPLPSYGRGRDTDGGRFISLLFGSNLTDVV 174
Query: 165 VTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYS 224
+TG N TI+GQGEPWW K+++ + TRPYLIE+M SD +QISNLT ++SPSW++HPVYS
Sbjct: 175 ITGENGTIDGQGEPWWGKFKRGELKYTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPVYS 234
Query: 225 SNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMP 284
N+ IQ LTI AP+ PNTDGINPDSCTNTRIED YIVSGDDC+AVKSGWD+YGI GMP
Sbjct: 235 RNIFIQSLTILAPVTVPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGINYGMP 294
Query: 285 TQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKE 344
T+ L+IRRL CISPDSA IALGSEMSGGI+DVRAEDI AIN++SG+RIKTA+GRG YVK+
Sbjct: 295 TKQLLIRRLTCISPDSAVIALGSEMSGGIEDVRAEDIVAINSESGIRIKTAIGRGGYVKD 354
Query: 345 IYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIR 404
+YVR MTM TMKYVFWMTG YGSHPD +DPKALP + INY+DMVA+NVT A+L GI
Sbjct: 355 VYVRGMTMNTMKYVFWMTGSYGSHPDEHYDPKALPVIQNINYQDMVAENVTMPAQLAGIS 414
Query: 405 NDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEP---TDCFFPD 461
D FTGICISNVTI L++KPK++ WNCT++ G TS VTPQ C+LLP+K+P C FP+
Sbjct: 415 GDQFTGICISNVTITLSKKPKKVLWNCTDVSGYTSGVTPQPCQLLPEKQPGTVVPCNFPE 474
Query: 462 DKLPIDDVRLNTC 474
D +PID+V+L C
Sbjct: 475 DPIPIDEVKLQRC 487
>gi|15233124|ref|NP_191708.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|42572755|ref|NP_974473.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|334186188|ref|NP_001190154.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|6850840|emb|CAB71079.1| putative protein [Arabidopsis thaliana]
gi|332646690|gb|AEE80211.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646691|gb|AEE80212.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646692|gb|AEE80213.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 476
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 298/474 (62%), Positives = 375/474 (79%), Gaps = 9/474 (1%)
Query: 15 HVIKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTK 74
+++ + T++TL L R +++ T E+ A+ CR HSA +T++GGVGDGKT NTK
Sbjct: 3 NILACIVTIITLSNLITISQGRRVSQSFETFEYTAIICRSHSASITEYGGVGDGKTLNTK 62
Query: 75 AFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLL 134
AF +A+ +LS+Y+++GGAQL VP GKWLTGSFNLTSHFTL++HKDA+LLA+QD +E+P+L
Sbjct: 63 AFQSAVDHLSQYSSEGGAQLFVPAGKWLTGSFNLTSHFTLFLHKDAILLAAQDLNEYPIL 122
Query: 135 PPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPY 194
LPSYGRGRD GGRF+SLIFGTNL+DV++TG N TI+GQG WW K+ + TRPY
Sbjct: 123 KALPSYGRGRDAAGGRFASLIFGTNLSDVIITGNNGTIDGQGSFWWQKFHGGKLKYTRPY 182
Query: 195 LIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNT 254
LIE+MFSD +QISNLT +DSPSWN+HPVYSSN++++G+TI AP+ SPNTDGINPDSCTNT
Sbjct: 183 LIELMFSDTIQISNLTFLDSPSWNIHPVYSSNIIVKGVTIIAPVKSPNTDGINPDSCTNT 242
Query: 255 RIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIK 314
RIED YI+SGDDC+AVKSGWDEYGI GMPT+HL+IRRL CISP SAAIALGSEMSGGI+
Sbjct: 243 RIEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIRRLTCISPYSAAIALGSEMSGGIE 302
Query: 315 DVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFD 374
DVRAEDITA T+SGVRIKTAVGRGA+VK IYV+ M + TMK+VFWMTG+Y +H D +D
Sbjct: 303 DVRAEDITAYQTESGVRIKTAVGRGAFVKNIYVKGMNLHTMKWVFWMTGNYKAHADSHYD 362
Query: 375 PKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNI 434
P ALP +TGINYRD+VA+NV+ + +L+GI DPFTGICISN TI + K K+ W C+++
Sbjct: 363 PHALPEITGINYRDIVAENVSMAGRLEGISGDPFTGICISNATISMAAKHKKAIWMCSDV 422
Query: 435 QGITSRVTPQACELLPKKEPT---------DCFFPDDKLPIDDVRLNTCSASIS 479
+G+TS V P+ C+LL +E C FP D L ID+V L TCS +S
Sbjct: 423 EGVTSGVDPKPCDLLDGQESETTKKKMIDGGCDFPTDVLEIDNVELKTCSYQMS 476
>gi|343172553|gb|AEL98980.1| putative polygalacturonase, partial [Silene latifolia]
gi|343172555|gb|AEL98981.1| putative polygalacturonase, partial [Silene latifolia]
Length = 431
Score = 629 bits (1622), Expect = e-177, Method: Compositional matrix adjust.
Identities = 287/431 (66%), Positives = 354/431 (82%), Gaps = 3/431 (0%)
Query: 47 FQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSF 106
++ LNCRKHSA +T+FG GDGKT NTKAF TA++ LS+ DGGAQL+VPPG+WLTGSF
Sbjct: 1 YRGLNCRKHSAFITEFGAKGDGKTLNTKAFKTAVNFLSRLTHDGGAQLVVPPGRWLTGSF 60
Query: 107 NLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVT 166
+L SHFTLY+H+ A+LLASQDE E+P+L PLPSYG+GRD P GRF+SLIFGTNLTDVV+T
Sbjct: 61 SLISHFTLYLHQGAVLLASQDEKEYPILEPLPSYGKGRDAPAGRFASLIFGTNLTDVVIT 120
Query: 167 GGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSN 226
G N TI+GQGE WW KY+ + TRPY+IE+M+S+ VQISNLTL++SP+WNVHPVY +
Sbjct: 121 GANGTIDGQGESWWKKYKSNELTQTRPYMIELMYSNGVQISNLTLLNSPNWNVHPVYCRD 180
Query: 227 VLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQ 286
V+I+GLTI AP SPNTDGI+PDSC+N RIE NYIVSGDDC+A+KSGWDEYGI+ MPTQ
Sbjct: 181 VIIRGLTILAPTHSPNTDGIDPDSCSNVRIEHNYIVSGDDCIAIKSGWDEYGIRFNMPTQ 240
Query: 287 HLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIY 346
++IR L CISP SA IALGSEMSGGI++VRAE ITAI+T+SG+R+KT+ GRGA+V+ IY
Sbjct: 241 DVVIRHLTCISPTSATIALGSEMSGGIQNVRAEHITAIDTESGIRVKTSPGRGAFVRNIY 300
Query: 347 VRRMTMKTMKYVFWMTGDYGS---HPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGI 403
VR+MTMKTMKYVFWMTG Y S HPD ++P+ALP + GINY DMVA NV+ L+GI
Sbjct: 301 VRKMTMKTMKYVFWMTGYYSSSRVHPDRHYNPRALPVIEGINYMDMVAANVSMPGYLEGI 360
Query: 404 RNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTDCFFPDDK 463
+ D F GIC+SNVTI L +KPKE+ WNCTNI+G+ S VTPQ C L + + C FP+D+
Sbjct: 361 KEDVFKGICLSNVTIGLAKKPKEMLWNCTNIEGVASGVTPQPCGFLRESKAMGCPFPEDR 420
Query: 464 LPIDDVRLNTC 474
LPI++V+L C
Sbjct: 421 LPIEEVKLKVC 431
>gi|242094380|ref|XP_002437680.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
gi|241915903|gb|EER89047.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
Length = 495
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 279/475 (58%), Positives = 358/475 (75%), Gaps = 11/475 (2%)
Query: 14 PHVIKILSTLLTLGLLSPQVAECR-------PTKNSYTIEFQALNCRKHSAVLTDFGGVG 66
P ++ IL +L L L + P + + A CR H+A L DFGGVG
Sbjct: 11 PPLLHILRSLCLLVLAASAAVSVSGRHHAPTPAHGTGQSMYLAPACRAHTASLADFGGVG 70
Query: 67 DGKTSNTKAFNTAISNLSKYAAD--GGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLA 124
DG TSNT AF +A+ +LS+Y+ + GGA L VP GKWLTG FNLTSHFTL++H DA++LA
Sbjct: 71 DGTTSNTAAFRSAVDHLSQYSGEDAGGAMLYVPAGKWLTGPFNLTSHFTLFLHSDAVILA 130
Query: 125 SQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYR 184
SQD +EWP++ PLPSYGRGRD+ GGRF+SL+ G+NLTDVV+TG N TI+GQG WW K+
Sbjct: 131 SQDINEWPIIDPLPSYGRGRDKIGGRFASLVGGSNLTDVVITGNNGTIDGQGAMWWSKFH 190
Query: 185 KKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTD 244
K Q TR YLIE+M SD + ISNLTL++SP+WN+HPVYSSN+++QG+TI AP +SPNTD
Sbjct: 191 KNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNIVVQGITILAPTNSPNTD 250
Query: 245 GINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIA 304
GINPDSC++ RIED YIVSGDDCVA+KSGWDEYGI GMP+QH++IRRL C+SP SA IA
Sbjct: 251 GINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCVSPTSAVIA 310
Query: 305 LGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGD 364
LGSEMSGGI+DVRAEDITAIN++SGVRIKTAVGRGAYVK+++VRRMT+ TMK+VFWMTG+
Sbjct: 311 LGSEMSGGIQDVRAEDITAINSESGVRIKTAVGRGAYVKDVFVRRMTLTTMKWVFWMTGN 370
Query: 365 YGSHPDPGFDPKALPTVTGINYRDMVADNV-TQSAKLDGIRNDPFTGICISNVTIKLTEK 423
Y SHPD +DP A+P V I+Y+D+VA V ++A+L+GI+ PF GIC++NVT L+ K
Sbjct: 371 YKSHPDDKYDPNAIPVVDNISYQDVVATGVYKEAARLEGIQGAPFKGICVANVTADLS-K 429
Query: 424 PKELQWNCTNIQGITSRVTPQACELLPKKEPTDCFFPDDKLPIDDVRLNTCSASI 478
++ W C +++G++ V+P C+ L C FP D LPID V + C+ +
Sbjct: 430 SRKYPWTCADVEGVSVNVSPAPCQPLQGAHDGACPFPTDTLPIDQVTVQQCAYDV 484
>gi|55295844|dbj|BAD67712.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|125553735|gb|EAY99340.1| hypothetical protein OsI_21311 [Oryza sativa Indica Group]
gi|125595774|gb|EAZ35554.1| hypothetical protein OsJ_19837 [Oryza sativa Japonica Group]
Length = 485
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 275/469 (58%), Positives = 357/469 (76%), Gaps = 8/469 (1%)
Query: 17 IKILSTLLTLGLLSPQVAECRPTKNSYTIEFQAL----NCRKHSAVLTDFGGVGDGKTSN 72
+ +L ++ L L + R + I Q++ +CR H+A LTDFGGVGDG TSN
Sbjct: 14 LHVLRSVCVLLLAASATVAARRHGPAAPIAGQSMYLAPSCRAHTASLTDFGGVGDGTTSN 73
Query: 73 TKAFNTAISNLSKYAADGG--AQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESE 130
T AF +A+ +LS+Y+ +GG A L VP GKWLTG FNLTSHFTL++H DA++L SQD E
Sbjct: 74 TAAFKSAVDHLSQYSGEGGGGAMLYVPAGKWLTGPFNLTSHFTLFLHSDAVILGSQDMGE 133
Query: 131 WPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNV 190
WP++ PLPSYGRGRD+ GGR++SLI G+NLTDVV+TG N TI+GQG WW K+ +
Sbjct: 134 WPIIDPLPSYGRGRDKAGGRYASLIGGSNLTDVVITGANGTIDGQGAMWWSKFHSNKLKY 193
Query: 191 TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDS 250
TR YLIEVM SD V ISN+TL++SP+WN+HPVYSSN+++QG+TI AP SPNTDGINPDS
Sbjct: 194 TRGYLIEVMHSDTVVISNVTLVNSPAWNIHPVYSSNIVVQGVTILAPTHSPNTDGINPDS 253
Query: 251 CTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMS 310
C++ RIED YIVSGDDCVA+KSGWDEYGI GMP+QH+++RRL C+SP SA IALGSEMS
Sbjct: 254 CSHVRIEDCYIVSGDDCVAIKSGWDEYGIAYGMPSQHIVVRRLTCVSPTSAVIALGSEMS 313
Query: 311 GGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPD 370
GGI DVRAEDITA+N++S VRIKTAVGRGAYV++++VR M++ TMK+VFWMTG+Y SHPD
Sbjct: 314 GGISDVRAEDITAVNSESAVRIKTAVGRGAYVRDVFVRGMSLDTMKWVFWMTGNYKSHPD 373
Query: 371 PGFDPKALPTVTGINYRDMVADNV-TQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQW 429
G+DP A+P V I+Y+D+VA V ++A+L+GI+ PF GICI+NVT L+ K ++ W
Sbjct: 374 DGYDPNAIPVVDNISYQDVVATGVYKEAARLEGIQGAPFRGICIANVTATLS-KSRKYPW 432
Query: 430 NCTNIQGITSRVTPQACELLPKKEPTDCFFPDDKLPIDDVRLNTCSASI 478
CT+I+G+++ VTP C+ L C FP D LPID + + C+ S+
Sbjct: 433 TCTDIEGVSTGVTPAPCQPLQGAHDGACPFPTDTLPIDQLVMQQCAYSV 481
>gi|91806548|gb|ABE66001.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
Length = 416
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 286/459 (62%), Positives = 335/459 (72%), Gaps = 60/459 (13%)
Query: 23 LLTLGLLSPQVAECRPTKNSYT--IEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAI 80
L+ L + E R +NS T IEF ALNCRKHSA+LTDFG VGDGKTSNTKAF AI
Sbjct: 9 LVFLAIFLFPAIESRSHRNSVTSKIEFSALNCRKHSAILTDFGAVGDGKTSNTKAFRNAI 68
Query: 81 SNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSY 140
S LS+ A DGGAQL+VPPGKWLTGSFNLTSHFTL+I + A +LASQDESEWP++ PLPSY
Sbjct: 69 SKLSQMATDGGAQLVVPPGKWLTGSFNLTSHFTLFIQRGATILASQDESEWPVIAPLPSY 128
Query: 141 GRGRDEPG-GRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVM 199
G+GRD G GRF+SLI GTNLTDVV+TG N TINGQG+ WW K++KKQF +TRPYLIE++
Sbjct: 129 GKGRDGTGTGRFNSLISGTNLTDVVITGNNGTINGQGQYWWDKFKKKQFKITRPYLIEIL 188
Query: 200 FSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDN 259
FS N+QISN+TLIDSPSWN+HPVY ++V+++ +T+ AP+ PNTDGINPDSCTNT IED
Sbjct: 189 FSKNIQISNITLIDSPSWNIHPVYCNSVIVKSVTVLAPVTVPNTDGINPDSCTNTLIEDC 248
Query: 260 YIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAE 319
YIVSGDDC+AVKSGWD+YG
Sbjct: 249 YIVSGDDCIAVKSGWDQYG----------------------------------------- 267
Query: 320 DITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALP 379
IKTAVGRGAYVK+IY RR+TMKTMKYVFWM+G+YGSHPD GFDPKALP
Sbjct: 268 ------------IKTAVGRGAYVKDIYARRITMKTMKYVFWMSGNYGSHPDEGFDPKALP 315
Query: 380 TVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITS 439
+T INYRDM A+NVT SA LDGI DPFTGICISNVTI L K K++QWNCT++ G+TS
Sbjct: 316 EITNINYRDMTAENVTMSASLDGIDKDPFTGICISNVTIALAAKAKKMQWNCTDVAGVTS 375
Query: 440 RVTPQACELLPKKEP----TDCFFPDDKLPIDDVRLNTC 474
RVTP+ C LLP+K+ DC FP D +PI+ V L C
Sbjct: 376 RVTPEPCSLLPEKKAQAKNVDCAFPSDLIPIESVVLKKC 414
>gi|359490607|ref|XP_003634121.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Vitis vinifera]
Length = 492
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 303/476 (63%), Positives = 360/476 (75%), Gaps = 25/476 (5%)
Query: 1 MEFCLKSRNNILHPHVIKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLT 60
M FCL R + GLLS +V EC+ + ++E+ A+NCR HSAV+
Sbjct: 1 MGFCLNPRK---------------SHGLLSVRVGECQTARTMASVEYPAINCRNHSAVVM 45
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDA 120
+FG GDGKTSNTKAF +AI +LSK+A GGA LIVPPGKWLTGSFNLTSHFTLYIHKDA
Sbjct: 46 EFGAAGDGKTSNTKAFKSAIDHLSKFADVGGAHLIVPPGKWLTGSFNLTSHFTLYIHKDA 105
Query: 121 LLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW 180
++L SQDES++P++ LPSYG GRFSSLI GTNLTDVV+TGGN T NGQG+PWW
Sbjct: 106 IILGSQDESDYPIVKALPSYG----GTAGRFSSLILGTNLTDVVITGGNGTTNGQGKPWW 161
Query: 181 IKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDS 240
K+ +K+ N TRP LIE++FS VQI+ TLIDSPSWNVHP+YS NV+IQGLTI AP+
Sbjct: 162 DKFHEKRLNATRPNLIEIVFSYQVQITX-TLIDSPSWNVHPIYSRNVIIQGLTIIAPVTV 220
Query: 241 PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS 300
PNTDGINPDSCTN R+ED YIVSGDD +AVKS +E G+K GMPT+ LIIRRL CISP S
Sbjct: 221 PNTDGINPDSCTNIRVEDCYIVSGDDSIAVKSALNENGVKCGMPTEGLIIRRLTCISPHS 280
Query: 301 AAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFW 360
A IALG EM+G + +VRAEDITAI+ Q G+RIKT + RG YVK+IYVRRMTMKTM++ FW
Sbjct: 281 AVIALGREMAGXM-NVRAEDITAIDXQFGIRIKTGLERGGYVKDIYVRRMTMKTMRFAFW 339
Query: 361 MTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKL 420
+ GDYG P PG + P + GINYRDMVADNVT A+L GI PFTG CISNVTI L
Sbjct: 340 IIGDYGPPPAPGHEG---PVIEGINYRDMVADNVTYPAQLHGISGGPFTGFCISNVTIGL 396
Query: 421 TEKPKELQWNCTNIQGITSRVTPQACELL-PKKEPTDCFFPDDKLPIDDVRLNTCS 475
TE+ ++ QW+C +QGITSRVTPQ C+LL P KE +C FP D LPI+DV+L CS
Sbjct: 397 TEESRKQQWDCDEVQGITSRVTPQPCDLLSPSKEILNCPFPKDLLPIEDVKLRICS 452
>gi|413942575|gb|AFW75224.1| glycoside hydrolase, family 28 [Zea mays]
Length = 506
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 275/444 (61%), Positives = 345/444 (77%), Gaps = 4/444 (0%)
Query: 38 PTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGA--QLI 95
P + S + A CR H+A + DFGGVGDG TSNT AF +A+ +LS+Y+ +GG L
Sbjct: 60 PARGSGQSMYLAPACRAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLY 119
Query: 96 VPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLI 155
VP GKWLTG FNLTSHFTLY+H+DA++L SQD EWP++ PLPSYGRGRD+ GGRF+SLI
Sbjct: 120 VPAGKWLTGPFNLTSHFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDKVGGRFASLI 179
Query: 156 FGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSP 215
G+NLTDVV+TG N TI+GQG WW K+ K Q TR YLIE+M SD + ISNLTL++SP
Sbjct: 180 GGSNLTDVVITGSNGTIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSP 239
Query: 216 SWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWD 275
+WN+HPVYSSN+++QG+TI AP +SPNTDGINPDSC++ RIED YIVSGDDCVA+KSGWD
Sbjct: 240 AWNIHPVYSSNIVVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWD 299
Query: 276 EYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTA 335
EYGI GMP+QH++IRRL C+SP SA IALGSEMSGGI+DVRAEDITAINT+S VRIKTA
Sbjct: 300 EYGISYGMPSQHIVIRRLTCVSPTSAVIALGSEMSGGIQDVRAEDITAINTESAVRIKTA 359
Query: 336 VGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNV- 394
VGRGAYV++++ RRMT+ TMK VFWMTGDY SHPD +DP A+P V I+Y+D+VA V
Sbjct: 360 VGRGAYVRDVFARRMTLTTMKRVFWMTGDYKSHPDDKYDPNAVPVVANISYQDVVATGVY 419
Query: 395 TQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEP 454
++A+L GI+ PF GIC++NVT L+ K ++ WNC +I+G+++ V+P C+ L
Sbjct: 420 KEAARLQGIQGAPFRGICVANVTADLS-KSRKYPWNCADIEGVSANVSPAPCDPLQGAHD 478
Query: 455 TDCFFPDDKLPIDDVRLNTCSASI 478
C FP D LPID V + C+ I
Sbjct: 479 GACPFPTDTLPIDQVTVQQCAYDI 502
>gi|226506670|ref|NP_001151164.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|194707808|gb|ACF87988.1| unknown [Zea mays]
gi|413942574|gb|AFW75223.1| glycoside hydrolase, family 28 [Zea mays]
Length = 486
Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust.
Identities = 275/444 (61%), Positives = 345/444 (77%), Gaps = 4/444 (0%)
Query: 38 PTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGA--QLI 95
P + S + A CR H+A + DFGGVGDG TSNT AF +A+ +LS+Y+ +GG L
Sbjct: 40 PARGSGQSMYLAPACRAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLY 99
Query: 96 VPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLI 155
VP GKWLTG FNLTSHFTLY+H+DA++L SQD EWP++ PLPSYGRGRD+ GGRF+SLI
Sbjct: 100 VPAGKWLTGPFNLTSHFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDKVGGRFASLI 159
Query: 156 FGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSP 215
G+NLTDVV+TG N TI+GQG WW K+ K Q TR YLIE+M SD + ISNLTL++SP
Sbjct: 160 GGSNLTDVVITGSNGTIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSP 219
Query: 216 SWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWD 275
+WN+HPVYSSN+++QG+TI AP +SPNTDGINPDSC++ RIED YIVSGDDCVA+KSGWD
Sbjct: 220 AWNIHPVYSSNIVVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWD 279
Query: 276 EYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTA 335
EYGI GMP+QH++IRRL C+SP SA IALGSEMSGGI+DVRAEDITAINT+S VRIKTA
Sbjct: 280 EYGISYGMPSQHIVIRRLTCVSPTSAVIALGSEMSGGIQDVRAEDITAINTESAVRIKTA 339
Query: 336 VGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNV- 394
VGRGAYV++++ RRMT+ TMK VFWMTGDY SHPD +DP A+P V I+Y+D+VA V
Sbjct: 340 VGRGAYVRDVFARRMTLTTMKRVFWMTGDYKSHPDDKYDPNAVPVVANISYQDVVATGVY 399
Query: 395 TQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEP 454
++A+L GI+ PF GIC++NVT L+ K ++ WNC +I+G+++ V+P C+ L
Sbjct: 400 KEAARLQGIQGAPFRGICVANVTADLS-KSRKYPWNCADIEGVSANVSPAPCDPLQGAHD 458
Query: 455 TDCFFPDDKLPIDDVRLNTCSASI 478
C FP D LPID V + C+ I
Sbjct: 459 GACPFPTDTLPIDQVTVQQCAYDI 482
>gi|195644726|gb|ACG41831.1| glycoside hydrolase, family 28 [Zea mays]
Length = 439
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 273/435 (62%), Positives = 342/435 (78%), Gaps = 4/435 (0%)
Query: 47 FQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGA--QLIVPPGKWLTG 104
+ A CR H+A + DFGGVGDG TSNT AF +A+ +LS+Y+ +GG L VP GKWLTG
Sbjct: 2 YLAPACRAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKWLTG 61
Query: 105 SFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVV 164
FNLTSHFTLY+H+DA++L SQD EWP++ PLPSYGRGRD+ GGRF+SLI G+NLTDVV
Sbjct: 62 PFNLTSHFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDKVGGRFASLIGGSNLTDVV 121
Query: 165 VTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYS 224
+TG N TI+GQG WW K+ K Q TR YLIE+M SD + ISNLTL++SP+WN+HPVYS
Sbjct: 122 ITGSNGTIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYS 181
Query: 225 SNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMP 284
SN+++QG+TI AP +SPNTDGINPDSC++ RIED YIVSGDDCVA+KSGWDEYGI GMP
Sbjct: 182 SNIVVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMP 241
Query: 285 TQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKE 344
+QH++IRRL C+SP SA IALGSEMSGGI+DVRAEDITAINT+S VRIKTAVGRGAYV++
Sbjct: 242 SQHIVIRRLTCVSPTSAVIALGSEMSGGIQDVRAEDITAINTESAVRIKTAVGRGAYVRD 301
Query: 345 IYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNV-TQSAKLDGI 403
++ RRMT+ TMK VFWMTGDY SHPD +DP A+P V I+Y+D+VA V ++A+L GI
Sbjct: 302 VFARRMTLTTMKRVFWMTGDYKSHPDDKYDPNAVPVVANISYQDVVATGVYKEAARLQGI 361
Query: 404 RNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTDCFFPDDK 463
+ PF GIC++NVT L+ K ++ WNC +I+G+++ V+P C+ L C FP D
Sbjct: 362 QGAPFRGICVANVTADLS-KSRKYPWNCADIEGVSANVSPAPCDPLQGAHDGACPFPTDT 420
Query: 464 LPIDDVRLNTCSASI 478
LPID V + C+ I
Sbjct: 421 LPIDQVTVQQCAYDI 435
>gi|297742230|emb|CBI34379.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 580 bits (1494), Expect = e-163, Method: Compositional matrix adjust.
Identities = 286/434 (65%), Positives = 325/434 (74%), Gaps = 50/434 (11%)
Query: 45 IEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTG 104
E+ A+NCR HSA LTDFGGVGDG TSNTKAF AI +LS++A+DGG+QL VPPG+WLTG
Sbjct: 41 FEYSAINCRAHSASLTDFGGVGDGTTSNTKAFQAAIDHLSQFASDGGSQLFVPPGRWLTG 100
Query: 105 SFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVV 164
SFNLTSHFTLY+HKDA+LLASQDE EWP++ PLPSYGRGRD GGR+ SLIFGTNLTDVV
Sbjct: 101 SFNLTSHFTLYLHKDAVLLASQDEHEWPVIDPLPSYGRGRDTQGGRYISLIFGTNLTDVV 160
Query: 165 VTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYS 224
+TG N TI+GQG WW K+ K + TRPYLIE+M SDNVQIS+LTL++SPSWNVHPVYS
Sbjct: 161 ITGENGTIDGQGALWWAKFHKGELKYTRPYLIEIMHSDNVQISSLTLVNSPSWNVHPVYS 220
Query: 225 SNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMP 284
SNV+IQGLTI AP+ SPNTDGINPDSCTNTRIED YIVSGDDC+AVKSGWDEYGI GMP
Sbjct: 221 SNVIIQGLTITAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDEYGIAYGMP 280
Query: 285 TQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKE 344
T+ L+IRRL CISP SA IALGSEMSGGI+DVRAEDI AI+T+SGVRIKTA
Sbjct: 281 TKQLVIRRLTCISPFSATIALGSEMSGGIEDVRAEDILAIDTESGVRIKTA--------- 331
Query: 345 IYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIR 404
GINYRDMVA+NVT + +L+GI
Sbjct: 332 --------------------------------------GINYRDMVAENVTMAGRLEGIS 353
Query: 405 NDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTD---CFFPD 461
DPFTGICISNVTI L +K K+ W CT+I GITS V PQ C+LLP + P C FP
Sbjct: 354 GDPFTGICISNVTIGLAKKAKKAPWTCTDIAGITSGVVPQPCDLLPDQGPEKIVACNFPT 413
Query: 462 DKLPIDDVRLNTCS 475
D LPID V + TCS
Sbjct: 414 DSLPIDTVEVQTCS 427
>gi|357118995|ref|XP_003561232.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 512
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 262/442 (59%), Positives = 347/442 (78%), Gaps = 8/442 (1%)
Query: 47 FQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGA--QLIVPPGKWLTG 104
+ A CR+H+A L +FGGVGDG TSNT AF A+ +LS+Y+ DGG L VP G+WLT
Sbjct: 63 YLAPACREHTASLAEFGGVGDGTTSNTAAFRAAVEHLSQYSGDGGGGGMLYVPAGRWLTA 122
Query: 105 SFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVV 164
FNLTSHFTL++H DA++LASQ+ SEWP++ PLPSYGRGRD GGR++SLI G+NLTDVV
Sbjct: 123 PFNLTSHFTLFLHSDAVILASQNISEWPVIAPLPSYGRGRDHAGGRYTSLISGSNLTDVV 182
Query: 165 VTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYS 224
+TG N TI+GQG WW KY+ + TR YLIE+M SD + ISN+TL++SP+WN+HPVYS
Sbjct: 183 ITGNNGTIDGQGATWWSKYKSGKLKYTRGYLIELMSSDTIFISNVTLLNSPAWNIHPVYS 242
Query: 225 SNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMP 284
N++IQG+TI AP SPNTDGINPDSC+ RIED Y+VSGDDCVA+KSGWDEYGI G+P
Sbjct: 243 KNIVIQGVTILAPTRSPNTDGINPDSCSQVRIEDCYVVSGDDCVAIKSGWDEYGIAAGIP 302
Query: 285 TQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKE 344
T+H+I+RRL C+SP SA +A+GSEMSGG++DVR ED+ A++T+S VRIKTAVGRGAYVK+
Sbjct: 303 TEHVIVRRLTCVSPTSALVAIGSEMSGGVRDVRIEDVAAVDTESAVRIKTAVGRGAYVKD 362
Query: 345 IYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNV-TQSAKLDGI 403
IY RRMT+ MK VFWMTGDY SHPD G+D A+P V G++++D+ A V ++A+++GI
Sbjct: 363 IYARRMTLTGMKRVFWMTGDYKSHPDDGYDKTAVPVVEGVSFQDVAATGVWKEAARMEGI 422
Query: 404 RNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEP----TDCFF 459
PF GIC++NVT+++T KP+++ WNC +++G+++ VTP C L +K+ +DC F
Sbjct: 423 SGAPFKGICMANVTMEMT-KPRKVMWNCADVEGVSTGVTPAPCGQLQQKQDGAGGSDCPF 481
Query: 460 PDDKLPIDDVRLNTCSASISKA 481
P DKL +D+V + C+ S+ KA
Sbjct: 482 PTDKLAVDEVTVQQCTYSLPKA 503
>gi|226508288|ref|NP_001151102.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|195644332|gb|ACG41634.1| glycoside hydrolase, family 28 [Zea mays]
gi|219886803|gb|ACL53776.1| unknown [Zea mays]
gi|414864493|tpg|DAA43050.1| TPA: glycoside hydrolase, family 28 [Zea mays]
Length = 463
Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust.
Identities = 259/430 (60%), Positives = 336/430 (78%), Gaps = 3/430 (0%)
Query: 47 FQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSF 106
+ CRKH A +T++G VGDG+T NT AF A+++L++ A DGGA L+VPPGKWLTG F
Sbjct: 35 YAGPGCRKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPF 94
Query: 107 NLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVT 166
NLTS FTLY+ + A +LASQD WPL+ PLPSYGRGRDEPG R+S+ I G+NLTDV++T
Sbjct: 95 NLTSCFTLYLDEGAEILASQDMKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIIT 154
Query: 167 GGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSN 226
G N TINGQG+ WW K+ K+ TR +L+E+++SDN+ ISN+T +D+P WN+HP Y +N
Sbjct: 155 GKNGTINGQGQVWWDKFHAKELKFTRGHLLELLYSDNIIISNVTFVDAPYWNLHPTYCTN 214
Query: 227 VLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQ 286
V I G+TI AP++SPNTDGI+PDS + +IED YIVSGDDCVAVKSGWDEYGI+ MP+Q
Sbjct: 215 VTISGVTILAPVNSPNTDGIDPDSSSRVKIEDCYIVSGDDCVAVKSGWDEYGIRFNMPSQ 274
Query: 287 HLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIY 346
H++IRRL C+SP SA IALGSEMSGGI+DVRAED AINT+S VR+K+ GRG +V++I+
Sbjct: 275 HIVIRRLTCVSPTSAMIALGSEMSGGIRDVRAEDSVAINTESAVRVKSGAGRGGFVRDIF 334
Query: 347 VRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRND 406
VR +++ TMK+VFWMTG+YG HPD DP A+P VTGINY D+ A+NVT + +++GI D
Sbjct: 335 VRGLSLHTMKWVFWMTGNYGQHPDNTSDPNAMPEVTGINYSDVFAENVTMAGRMEGIPKD 394
Query: 407 PFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQAC-ELLPKKEPTDCFFPDDKLP 465
P+TGICISNVT +L KELQWNCTN++G+TS V+P+ C EL + +P C FP+++L
Sbjct: 395 PYTGICISNVTARLAPDAKELQWNCTNVKGVTSHVSPKPCPELAAEGKP--CAFPEEELV 452
Query: 466 IDDVRLNTCS 475
I L CS
Sbjct: 453 IGPPELPKCS 462
>gi|115450425|ref|NP_001048813.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|108705945|gb|ABF93740.1| polygalacturonase, putative, expressed [Oryza sativa Japonica
Group]
gi|113547284|dbj|BAF10727.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|125584758|gb|EAZ25422.1| hypothetical protein OsJ_09236 [Oryza sativa Japonica Group]
Length = 458
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 261/425 (61%), Positives = 337/425 (79%), Gaps = 3/425 (0%)
Query: 52 CRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSH 111
CRKH A +T++GGVGDG+ SNT AF A+++LS A DGGA L+VP GKWLTG FNLTSH
Sbjct: 35 CRKHVARITEYGGVGDGRRSNTAAFAKAVADLSLRAGDGGAALVVPKGKWLTGPFNLTSH 94
Query: 112 FTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNAT 171
FTL++ A +LASQ+ +WPL+ PLPSYGRGRDEPG R+S+ I G+NLTDV++TG N T
Sbjct: 95 FTLFLDHGAEILASQNLEDWPLIAPLPSYGRGRDEPGPRYSNFIAGSNLTDVIITGRNGT 154
Query: 172 INGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQG 231
INGQG+ WW K+ K+ TR YL+E+++S+N+ ISN+T +DSPSWN+HP Y +NV I G
Sbjct: 155 INGQGQVWWDKFHAKELTYTRGYLLELLYSNNIIISNVTFVDSPSWNLHPTYCTNVTISG 214
Query: 232 LTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIR 291
+TI AP++SPNTDGI+PDS ++ +IED+YIVSGDDC+AVKSGWD+YGIK MP+QH++IR
Sbjct: 215 ITILAPLNSPNTDGIDPDSSSHVKIEDSYIVSGDDCIAVKSGWDQYGIKFNMPSQHILIR 274
Query: 292 RLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMT 351
RL CISP SA IALGSEMSGGI+DVRA D AI+T+S VRIK+ VGRG YVK+++VR ++
Sbjct: 275 RLTCISPTSAMIALGSEMSGGIRDVRAVDNVAIDTESAVRIKSGVGRGGYVKDVFVRGLS 334
Query: 352 MKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGI 411
+ TMK+VFWMTG+YG HPD DP ALP VTGINY D+ A+NVT + +++GI NDP+TGI
Sbjct: 335 LHTMKWVFWMTGNYGQHPDNSSDPNALPEVTGINYSDVFAENVTMAGRMEGIPNDPYTGI 394
Query: 412 CISNVTIKLTEKPKELQWNCTNIQGITSRVTPQAC-ELLPKKEPTDCFFPDDKLPIDDVR 470
C+SNVT +L K+LQWNCT+++G+ S V+P C EL +P C FP+++L I
Sbjct: 395 CMSNVTAQLAPDAKKLQWNCTDVKGVASDVSPVPCPELGAAGKP--CAFPEEELVIGPPE 452
Query: 471 LNTCS 475
L TCS
Sbjct: 453 LPTCS 457
>gi|326490848|dbj|BAJ90091.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 257/432 (59%), Positives = 336/432 (77%), Gaps = 4/432 (0%)
Query: 47 FQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGA--QLIVPPGKWLTG 104
+ A NCR+H+A LTDFGGVGDG TSNT AF A+ +LS+Y+ +GG L VP G+WLT
Sbjct: 38 YMAPNCREHTASLTDFGGVGDGNTSNTAAFRKAVEHLSQYSGEGGGGGMLYVPAGRWLTA 97
Query: 105 SFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVV 164
FNLTSHFTL++H DA++L +QD ++WP++ PLPSYGRGRD GGR++SL+ G+NLTDVV
Sbjct: 98 PFNLTSHFTLFLHADAVILGTQDVAQWPVIDPLPSYGRGRDHAGGRYASLVSGSNLTDVV 157
Query: 165 VTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYS 224
+TG N TI+GQG WW KY+ + TR YLIE+M +D V ISN+TL++SP+WN+HPVYS
Sbjct: 158 ITGNNGTIDGQGATWWSKYKSGKLKYTRGYLIELMHTDGVFISNVTLVNSPAWNIHPVYS 217
Query: 225 SNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMP 284
N+++ G+TI AP+ SPNTDGINPDSC+ RIED Y+VSGDDCVA+KSGWDEYGI VGMP
Sbjct: 218 RNIVVSGVTILAPVKSPNTDGINPDSCSQVRIEDCYVVSGDDCVAIKSGWDEYGIAVGMP 277
Query: 285 TQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKE 344
++H+ +RRL C+SP SA IALGSEMSGGI+DVRAEDITAI T+S VRIKTAVGRGAYV++
Sbjct: 278 SEHISVRRLTCVSPTSAVIALGSEMSGGIRDVRAEDITAIGTESAVRIKTAVGRGAYVRD 337
Query: 345 IYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNV-TQSAKLDGI 403
+Y RRM + MK VFWMTGDY SHPD G+D A+P V I+Y+D+VA V ++A++ GI
Sbjct: 338 VYARRMRLDGMKRVFWMTGDYKSHPDDGYDKAAVPVVENISYQDVVATGVWKEAARMQGI 397
Query: 404 RNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTDCFFPDDK 463
+ PF GIC++NVT+++T K +++ WNC +++G+++ VTP C L C FP D
Sbjct: 398 QGAPFKGICMANVTMEMT-KERKVSWNCADVEGVSAGVTPAPCAPLQGTHGGACPFPTDT 456
Query: 464 LPIDDVRLNTCS 475
L +D + + CS
Sbjct: 457 LAVDQITVQQCS 468
>gi|357114278|ref|XP_003558927.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 462
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 262/426 (61%), Positives = 339/426 (79%), Gaps = 4/426 (0%)
Query: 52 CRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGG-AQLIVPPGKWLTGSFNLTS 110
CRKH +T++G VGDGKT NT AF A+++LS+ AADGG A L+VP GKWLTG FNLTS
Sbjct: 38 CRKHVKRITEYGAVGDGKTLNTAAFARAVADLSRRAADGGGAALVVPEGKWLTGPFNLTS 97
Query: 111 HFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNA 170
HFTL++H+ A +LASQD ++WPL+ PLPSYGRGRDEPG R+S+ I G+NLTDV++TG N
Sbjct: 98 HFTLFLHRGAEILASQDLNDWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIITGQNG 157
Query: 171 TINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQ 230
TINGQG+ WW KY K+ TR YL+E+++S ++ ISN+T +D+PSWN+HP Y +NV I
Sbjct: 158 TINGQGQVWWDKYHAKELTYTRGYLLELLYSHDIIISNVTFVDAPSWNLHPTYCTNVTIS 217
Query: 231 GLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLII 290
G+TI AP+ SPNTDGI+PDS + +IED YIVSGDDC+AVKSGWDEYGIK MP+QH+++
Sbjct: 218 GVTILAPVHSPNTDGIDPDSSSYVKIEDCYIVSGDDCIAVKSGWDEYGIKFNMPSQHIVV 277
Query: 291 RRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRM 350
RRL CISP SA IALGSEMSGGI+DVRAED AINT+S VRIK+ VGRG +VK+++VR +
Sbjct: 278 RRLTCISPTSAMIALGSEMSGGIQDVRAEDNIAINTESAVRIKSGVGRGGFVKDVFVRGL 337
Query: 351 TMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTG 410
++ TMK+VFWMTG+YG HPD +PKALP VTGINYRD+ A+NVT + +++GI NDP+TG
Sbjct: 338 SLHTMKWVFWMTGNYGQHPDNSSNPKALPEVTGINYRDVFAENVTMAGRMEGIPNDPYTG 397
Query: 411 ICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQAC-ELLPKKEPTDCFFPDDKLPIDDV 469
IC+SNVT +L K+LQWNCT+++G+ S V+P+ C EL +P C FP+++L I
Sbjct: 398 ICMSNVTAQLAPDAKKLQWNCTDVKGVASGVSPKPCPELGAVGKP--CTFPEEELVIGPP 455
Query: 470 RLNTCS 475
L C+
Sbjct: 456 ELPKCT 461
>gi|148909907|gb|ABR18040.1| unknown [Picea sitchensis]
Length = 472
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 266/448 (59%), Positives = 337/448 (75%), Gaps = 5/448 (1%)
Query: 35 ECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQL 94
EC+ K S++ + A +CR S + +FGGVGDG T NT+AF AI +LS+++ GG QL
Sbjct: 26 ECQ--KGSWSFSYVAPSCRAQSVSIAEFGGVGDGTTVNTEAFRKAIEHLSEFSETGGGQL 83
Query: 95 IVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSL 154
+PPG+WLTGSFNLT HFTLY+HK+A++L SQD +WPL+PPLPSYG GRD PG R+SSL
Sbjct: 84 YIPPGRWLTGSFNLTDHFTLYLHKEAVILGSQDLEDWPLIPPLPSYGMGRDAPGPRYSSL 143
Query: 155 IFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDS 214
I G NLTDVV+TG N TI+GQG WW K+ KK TR YL+E+M+S ++ ISNLT ++S
Sbjct: 144 INGYNLTDVVITGDNGTIDGQGAIWWQKFHKKILKNTRGYLVELMYSKDIIISNLTFLNS 203
Query: 215 PSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGW 274
P+WN+HPVYSSN+LIQ +TI AP+DSPNTDGI+PDSC+ RIED Y+VSGDD VA+KSGW
Sbjct: 204 PAWNLHPVYSSNILIQYVTILAPLDSPNTDGIDPDSCSYVRIEDCYVVSGDDIVAIKSGW 263
Query: 275 DEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKT 334
DEYGI GMP+QH++IRRL+ ISP SA IALGSEMSGGI+DVRAEDI AIN+++G+RIKT
Sbjct: 264 DEYGISFGMPSQHIVIRRLVGISPTSAIIALGSEMSGGIQDVRAEDIQAINSETGIRIKT 323
Query: 335 AVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNV 394
+ GRG +VK+I+V RMTM MK+ F MTG YGSHPD +DP ALP V I+Y ++VA NV
Sbjct: 324 SPGRGGFVKDIFVNRMTMVNMKWAFTMTGSYGSHPDNKYDPNALPAVERISYSNIVATNV 383
Query: 395 TQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL---PK 451
+ + KLDGI N PF IC++NVTI + K K+ WNCT I G+++ V PQ C LL P
Sbjct: 384 SVAGKLDGIANAPFKDICLTNVTITMAAKSKKYPWNCTYIHGLSNAVYPQPCSLLEERPA 443
Query: 452 KEPTDCFFPDDKLPIDDVRLNTCSASIS 479
+ C P + ++ L CS S S
Sbjct: 444 EGDAFCPSPQELDTTEENSLQHCSYSSS 471
>gi|242042413|ref|XP_002468601.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
gi|241922455|gb|EER95599.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
Length = 463
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 262/424 (61%), Positives = 331/424 (78%), Gaps = 3/424 (0%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
RKH A +T++G VGDG+T NT AF A+++LS A DGGA L+VPPGKWLTG FNLTS F
Sbjct: 41 RKHVAKVTEYGAVGDGRTLNTGAFAKAVADLSHRARDGGAALVVPPGKWLTGPFNLTSCF 100
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TLY+ + A +LASQD + WPL+ PLPSYGRGRDEPG R+ + I G+NLTDV++TG N TI
Sbjct: 101 TLYLDEGAEILASQDMNHWPLIAPLPSYGRGRDEPGPRYINFIGGSNLTDVIITGKNGTI 160
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
NGQG+ WW K+ K+ TR +L+E++ SDN+ ISN+T +D+P WN+HP Y +NV I G+
Sbjct: 161 NGQGQVWWDKFHAKELKSTRGHLLELLHSDNIIISNVTFVDAPYWNLHPTYCTNVTISGV 220
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TI AP++SPNTDGI+PDS T+ +IED YIVSGDDCVAVKSGWDEYGIK MP+QH++IRR
Sbjct: 221 TILAPLNSPNTDGIDPDSSTHVKIEDCYIVSGDDCVAVKSGWDEYGIKFNMPSQHIVIRR 280
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
L CISP SA IALGSEMSGGI+DVRAED AINT+S VRIK+ GRG +VK+I+VR +++
Sbjct: 281 LTCISPTSAMIALGSEMSGGIRDVRAEDNIAINTESAVRIKSGAGRGGFVKDIFVRGLSL 340
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
TMK+VFWMTG+YG HPD +P A+P VTGINY D+ A+NVT + +++GI NDP+TGIC
Sbjct: 341 HTMKWVFWMTGNYGQHPDNTSNPNAMPEVTGINYSDVFAENVTTAGRMEGIPNDPYTGIC 400
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQAC-ELLPKKEPTDCFFPDDKLPIDDVRL 471
ISNVT L ELQWNCTN++G+TS V+P+ C EL + +P C FP ++L I L
Sbjct: 401 ISNVTASLAPNATELQWNCTNVKGVTSNVSPKPCPELGAEGKP--CAFPVEELVIGPPAL 458
Query: 472 NTCS 475
CS
Sbjct: 459 PKCS 462
>gi|255545182|ref|XP_002513652.1| Exopolygalacturonase precursor, putative [Ricinus communis]
gi|223547560|gb|EEF49055.1| Exopolygalacturonase precursor, putative [Ricinus communis]
Length = 452
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 262/467 (56%), Positives = 339/467 (72%), Gaps = 37/467 (7%)
Query: 15 HVIKILSTLLTLGLLSPQVAECRPT----KNSY-TIEFQALNCRKHSAVLTDFGGVGDGK 69
H ++I + L+ +G +S +AE R K+SY + + A+NCRKH+A LTDFGGVGDGK
Sbjct: 11 HYLEIFTALVFVGSISVGIAESRNVQIFNKDSYNAVNYAAINCRKHTAFLTDFGGVGDGK 70
Query: 70 TSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDES 129
T NTKAF AI+NLS+YA DGGA+LIVP GKWLTGSFNLTSHFTL++H+ A +LASQ+E+
Sbjct: 71 TLNTKAFQAAIANLSQYADDGGAELIVPAGKWLTGSFNLTSHFTLFLHRGATILASQNEA 130
Query: 130 EWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFN 189
++P++ LPS+G +D P GRFSSLI G NLTDVV+TG N TI+GQG PWW K+ K F
Sbjct: 131 DFPIIAALPSFGVEKDFPDGRFSSLIRGINLTDVVITGNNGTIDGQGAPWWDKFEKGLFK 190
Query: 190 VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPD 249
+RP LI++M++D +QISN+TL++SPSW+VHPVY SNVL+QG+TI AP++ PNTDGINP
Sbjct: 191 ASRPLLIDIMYTDQLQISNITLVNSPSWHVHPVYCSNVLVQGVTIIAPVEVPNTDGINPS 250
Query: 250 SCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEM 309
+ S + +Y + P IS A IALGSEM
Sbjct: 251 RF------------------LASSFHQY---LNFP----------LISTSDAGIALGSEM 279
Query: 310 SGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHP 369
SGGI++VR EDITA +QS VRIKTA GRG YVK+I+VRRMT++TMKYVFW++G+Y +HP
Sbjct: 280 SGGIENVRVEDITAFTSQSAVRIKTAPGRGGYVKDIFVRRMTLQTMKYVFWISGNYKTHP 339
Query: 370 DPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQW 429
D GFDP AL + INYRD+VA NV S DG + FTGIC+SNVTI+L++ PK+ QW
Sbjct: 340 DDGFDPNALAEIKNINYRDIVARNVNMSGAFDGFPTNHFTGICMSNVTIQLSQTPKKPQW 399
Query: 430 NCTNIQGITSRVTPQACELLPKKEPTDCFFPDDKLPIDDVRLNTCSA 476
NC+N++G++S VTP C L P+K P DC FP+DKLPI+ + L TC+A
Sbjct: 400 NCSNVEGVSSHVTPTPCSLFPEK-PVDCTFPEDKLPIESIHLKTCTA 445
>gi|224151097|ref|XP_002337059.1| predicted protein [Populus trichocarpa]
gi|222837934|gb|EEE76299.1| predicted protein [Populus trichocarpa]
Length = 356
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 248/352 (70%), Positives = 296/352 (84%), Gaps = 3/352 (0%)
Query: 130 EWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFN 189
E+PL+ PLPSYGRGRD G RFSSLIFG NLTDVV+TG N TI+GQGE WW K+R + N
Sbjct: 3 EYPLIEPLPSYGRGRDADGARFSSLIFGNNLTDVVITGANGTIDGQGELWWTKFRAGELN 62
Query: 190 VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPD 249
TRPYLIE+MFS N+QISNLTLI+SPSWNVHPVY SNV++QGLTI AP+ SPNTDGINPD
Sbjct: 63 HTRPYLIEIMFSTNIQISNLTLINSPSWNVHPVYCSNVVVQGLTILAPVRSPNTDGINPD 122
Query: 250 SCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEM 309
SCTNT+I+D YIVSGDDCVAVKSGWDEYGI GMPT+ ++IRRL CISP SA IALGSEM
Sbjct: 123 SCTNTKIQDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQVVIRRLTCISPTSAVIALGSEM 182
Query: 310 SGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHP 369
SGGI+DVRAEDITAI+++SGVRIKTAVGRG YVK+IYVR MT+KTMK+VFWMTG+YGSHP
Sbjct: 183 SGGIEDVRAEDITAIDSESGVRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMTGNYGSHP 242
Query: 370 DPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQW 429
D +DP A+P + INYRD+VA+NVT +A+L+GI DPFTGICISNVTI L K+LQW
Sbjct: 243 DNNYDPNAIPVIQNINYRDVVAENVTMAARLEGIAGDPFTGICISNVTIGLARNRKKLQW 302
Query: 430 NCTNIQGITSRVTPQACELLPKKEPTD---CFFPDDKLPIDDVRLNTCSASI 478
NC+++ GITS VTP+ C+LL + P C +P+D LPI+++ + TCS+ +
Sbjct: 303 NCSDVAGITSEVTPKPCDLLSDQGPGKIGACNYPEDNLPIENMEVQTCSSML 354
>gi|302143796|emb|CBI22657.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 247/342 (72%), Positives = 288/342 (84%), Gaps = 5/342 (1%)
Query: 1 MEFCLKSRNNILHPHVIKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLT 60
MEFCL SR PH + I+ +L LGLLS +VAEC+ + I+++AL CRKHSAVLT
Sbjct: 1 MEFCLNSRK----PHALGIVLAVLILGLLSFRVAECQTSSFMEPIKYKALRCRKHSAVLT 56
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDA 120
DFG GDGKT NTKAF +AI +LS++A DGGA+LIVPPGKWLTGSFNLTSHFTLYI KDA
Sbjct: 57 DFGATGDGKTINTKAFKSAIDHLSQFADDGGAELIVPPGKWLTGSFNLTSHFTLYIDKDA 116
Query: 121 LLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW 180
++L +QDES +PL+ LPSYG GRD GGR SSLIFGTNLTDVV+TGGN T+NGQG+ WW
Sbjct: 117 VILGAQDESAYPLIEVLPSYGVGRDG-GGRHSSLIFGTNLTDVVITGGNGTLNGQGKYWW 175
Query: 181 IKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDS 240
K+R K++N TRPYLIE+M+S++VQISNLTLIDSPSWNVHPVYS NVL++ LTI APIDS
Sbjct: 176 DKFRAKKYNDTRPYLIEIMYSNHVQISNLTLIDSPSWNVHPVYSRNVLVKDLTILAPIDS 235
Query: 241 PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS 300
PNTDGINPDSC RIED +IVSGDDC+AVKSGWD+YG K GMPT+ L+IRRL CISPDS
Sbjct: 236 PNTDGINPDSCKKVRIEDCFIVSGDDCIAVKSGWDQYGYKFGMPTKDLLIRRLTCISPDS 295
Query: 301 AAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYV 342
A IALGSEMSGGIK+V AEDITAI+TQSG+RIKT +GRG Y+
Sbjct: 296 ATIALGSEMSGGIKNVWAEDITAIDTQSGIRIKTGIGRGGYI 337
>gi|356574519|ref|XP_003555394.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like,
partial [Glycine max]
Length = 305
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 223/299 (74%), Positives = 263/299 (87%), Gaps = 2/299 (0%)
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW K+ KKQ N+TRPY+IE+MFSD +QISNLTL++SPSW VHP+YSSN+ I+GLTI AP+
Sbjct: 2 WWDKFDKKQSNLTRPYMIEIMFSDQIQISNLTLVNSPSWFVHPIYSSNITIKGLTILAPV 61
Query: 239 DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISP 298
DSPNTDGI+PDSCTNTRIED YIVSGDDCVAVKSGWDEYGIK G PTQHL+IRRL CISP
Sbjct: 62 DSPNTDGIDPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISP 121
Query: 299 DSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGA--YVKEIYVRRMTMKTMK 356
DSA IALGSEMSGGI+DVR EDI AI+TQS VRIKTAVGRGA YVK+I+V+ M++ TMK
Sbjct: 122 DSAVIALGSEMSGGIQDVRVEDIIAISTQSTVRIKTAVGRGAMXYVKDIFVKGMSLSTMK 181
Query: 357 YVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNV 416
YVFWMTG YGSHPD GFDPKALP +TGINYRD+VA NVT SAKL+GI N PFTGICISNV
Sbjct: 182 YVFWMTGSYGSHPDAGFDPKALPNITGINYRDVVATNVTYSAKLEGISNAPFTGICISNV 241
Query: 417 TIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTDCFFPDDKLPIDDVRLNTCS 475
+I+++E+ K+LQWNCT++ G+TS V+P +C+LLP+K C FP+DKLPI++V+L TCS
Sbjct: 242 SIQVSEQRKKLQWNCTDVAGVTSNVSPNSCQLLPEKGKLGCPFPNDKLPIENVQLKTCS 300
>gi|297816102|ref|XP_002875934.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
gi|297321772|gb|EFH52193.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
Length = 443
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/445 (53%), Positives = 305/445 (68%), Gaps = 42/445 (9%)
Query: 38 PTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVP 97
PT + +E ALNCR+ SA+LTDFG +GDGKTSNTKAF AI NL+ A DGG+QLIVP
Sbjct: 36 PTPSRDFVEHAALNCRRQSAILTDFGAIGDGKTSNTKAFREAIRNLTSRAGDGGSQLIVP 95
Query: 98 PGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFG 157
GKWLTGSFNLTSHFTL+I + A +LASQDESE+P+L LPSY RD RF+SLI+G
Sbjct: 96 KGKWLTGSFNLTSHFTLHIKEGATILASQDESEYPMLQVLPSY---RDT---RFASLIYG 149
Query: 158 TNLTDVVVTGGNATINGQGEPWWIKYRKKQF-NVTRPYLIEVMFSDNVQISNLTLIDSPS 216
+NLTDVV+ G TINGQG+ WW KYR F ++ RP LIE+ S+NVQISN+ LIDSP
Sbjct: 150 SNLTDVVIAGDKGTINGQGKSWWAKYRNGGFKSIQRPMLIEIQSSENVQISNINLIDSPM 209
Query: 217 WNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDE 276
W++HPVY NV+I+G+ I PIDS NTDGINP
Sbjct: 210 WSIHPVYCRNVIIKGVKISNPIDSANTDGINP---------------------------- 241
Query: 277 YGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAV 336
VG P + L+IRR CI+P+ A IA+GSEMSGGIK VR ED+T NTQS ++I+TA+
Sbjct: 242 ----VGRPIEMLLIRRFSCIAPNGAGIAMGSEMSGGIKGVRMEDVTLHNTQSAIKIETAM 297
Query: 337 GRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQ 396
GRG YV+ ++ RR T+KT KYVF MTG + P G PKA P VT IN+RD+ +NV+
Sbjct: 298 GRGGYVQNVWARRFTIKTSKYVFLMTGSHKPIPRDGNIPKAKPVVTNINFRDITGENVST 357
Query: 397 SAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPT- 455
SAKL+G++++PFTG+C+SNV+I L+ + Q++C +I G + V PQ C LLP K P
Sbjct: 358 SAKLEGMKSNPFTGVCMSNVSISLSPNASKQQFHCMDIVGESRSVKPQPCSLLPDKHPGV 417
Query: 456 --DCFFPDDKLPIDDVRLNTCSASI 478
+C FP +K+PI++V L C+ +
Sbjct: 418 RFECTFPTEKIPIENVVLKRCAGHV 442
>gi|326501406|dbj|BAK02492.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 212/350 (60%), Positives = 280/350 (80%), Gaps = 3/350 (0%)
Query: 127 DESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKK 186
D +WPL+ PLPSYGRGRDEPG R+S+ I G+NLTDV+++G N TINGQG+ WW K+ K
Sbjct: 30 DLEDWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIISGNNGTINGQGQVWWDKFHAK 89
Query: 187 QFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGI 246
+ + TR YL+E+++S ++ ISN+T +D+PSWN+HP Y +NV I G+TI AP+ SPNTDGI
Sbjct: 90 ELDYTRGYLLELLYSRDIIISNVTFVDAPSWNLHPTYCTNVTISGVTILAPVHSPNTDGI 149
Query: 247 NPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALG 306
+PDS ++ +IED YIVSGDDC+AVKSGWDEYGI+ MP+QH+++RRL CISP SA IALG
Sbjct: 150 DPDSSSHVKIEDCYIVSGDDCIAVKSGWDEYGIRFNMPSQHIVVRRLTCISPTSAMIALG 209
Query: 307 SEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYG 366
SEMSGGI+DVR ED AINT+S VRIK+ VGRG +V++++VRR+++ TMK+VFWMTG+YG
Sbjct: 210 SEMSGGIQDVRVEDNIAINTESAVRIKSGVGRGGFVRDVFVRRLSLHTMKWVFWMTGNYG 269
Query: 367 SHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKE 426
HPD DPKALP VTGINYRD+ A+NVT + +++GI NDP+TGIC+SNVT +L K K+
Sbjct: 270 QHPDNSSDPKALPEVTGINYRDVFAENVTMAGRMEGIPNDPYTGICMSNVTAQLAPKAKK 329
Query: 427 LQWNCTNIQGITSRVTPQAC-ELLPKKEPTDCFFPDDKLPIDDVRLNTCS 475
LQWNCT++QG+ V+P+ C EL + +P C FPD++L I L C+
Sbjct: 330 LQWNCTDVQGVAYGVSPEPCPELGAEGKP--CTFPDEELVIGPPELPKCT 377
>gi|357511567|ref|XP_003626072.1| Polygalacturonase [Medicago truncatula]
gi|355501087|gb|AES82290.1| Polygalacturonase [Medicago truncatula]
Length = 466
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/411 (50%), Positives = 285/411 (69%), Gaps = 7/411 (1%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +T+FG VGDG T NTKAF AI L+ ++ GGA+L VP G+WLTGSF+L SH
Sbjct: 39 RPHSVSITEFGAVGDGITLNTKAFQNAIFYLNSFSDKGGAKLFVPAGRWLTGSFDLISHL 98
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL++ KDA++L S + +WP++ PLPSYGRGR+ PGGR SLI+G NLTDV++TG I
Sbjct: 99 TLWLDKDAIILGSTNSEDWPVVDPLPSYGRGRELPGGRHRSLIYGCNLTDVIITGNEGII 158
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW +R K + TRP+L+E+M S V ISNLT ++SP W +HPVY S V +Q +
Sbjct: 159 DGQGSIWWSMFRNKTLDYTRPHLVELMNSTRVLISNLTFLNSPFWTIHPVYCSQVTVQNV 218
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TI AP+DSPNTDGI+PDS + IED YI +GDD +A+KSGWDEYGI G P+ +++I R
Sbjct: 219 TILAPLDSPNTDGIDPDSSDDVCIEDCYISTGDDLIAIKSGWDEYGIAFGRPSTNIVIHR 278
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
L+ + SA IA+GSEMSGG+ DVRAEDI ++ + +RIKT+ GRG YV+ IYV MT+
Sbjct: 279 LVGKTHTSAGIAIGSEMSGGVSDVRAEDIHFYDSYTAIRIKTSPGRGGYVRNIYVTNMTL 338
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+ TG YG HPD +DP ALP + I D++ +N+T++ ++GI D F IC
Sbjct: 339 ANVDIAIRFTGSYGDHPDDAYDPNALPVIEKITIEDVIGENITKAGLIEGIEGDNFVNIC 398
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKK----EPTDCFF 459
+SN+T+ ++ WNC+NI+G + V P+ACE L ++ +DC++
Sbjct: 399 LSNITLNVSSN---YPWNCSNIRGYSDMVFPEACEPLKERIFPDHCSDCYY 446
>gi|255589944|ref|XP_002535132.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223523955|gb|EEF27252.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 476
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/411 (50%), Positives = 286/411 (69%), Gaps = 3/411 (0%)
Query: 48 QALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFN 107
+ + R HS +T+FG VGDG T NTKAF AI L+ ++ GGA+L VP G+WLTGSF+
Sbjct: 44 NSADIRPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFSDKGGAKLFVPAGRWLTGSFD 103
Query: 108 LTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG 167
L SH TL++ K+A++L S + +WP++ LPSYGRGR+ PGGR SLI+G NLTDVV+TG
Sbjct: 104 LISHLTLWLDKNAVILGSTNSDDWPVVDALPSYGRGRELPGGRHRSLIYGRNLTDVVITG 163
Query: 168 GNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNV 227
N TI+GQG WW ++ + N TRP+L+E+M S + ISNLT I+SP W +HPVY S V
Sbjct: 164 DNGTIDGQGSIWWTWFKTESLNYTRPHLVELMNSSGIVISNLTFINSPFWTIHPVYCSKV 223
Query: 228 LIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQH 287
++Q +TIRAP+DSPNTDGI+PDS + IED +I +GDD +A+KSGWDEYGI G P ++
Sbjct: 224 IVQNVTIRAPLDSPNTDGIDPDSSDDVCIEDCFISTGDDLIAIKSGWDEYGILYGRPCRN 283
Query: 288 LIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYV 347
+ IRRL+ + SA IA+GSEMSGG+ +V AE+I N+ +G+RIKT+ GRG YV+ IYV
Sbjct: 284 ITIRRLVGQTRSSAGIAIGSEMSGGVSEVHAENILFYNSNTGIRIKTSPGRGGYVRNIYV 343
Query: 348 RRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDP 407
+T+ + TG+YG HPD +DPKALP + I ++ DN+ + LDGI D
Sbjct: 344 SNVTLNDVNIAIRFTGNYGEHPDEHYDPKALPIIERITIEHVMGDNIKYAGILDGIEADS 403
Query: 408 FTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTDCF 458
F IC+SN+++ +T K WNC+ IQG + V+P+ CE L + P D +
Sbjct: 404 FVNICLSNISLNVTSK---FPWNCSYIQGYSESVSPEICEPLRESIPPDHY 451
>gi|308080756|ref|NP_001183080.1| uncharacterized protein LOC100501436 precursor [Zea mays]
gi|238009236|gb|ACR35653.1| unknown [Zea mays]
gi|414884141|tpg|DAA60155.1| TPA: hypothetical protein ZEAMMB73_186239 [Zea mays]
Length = 490
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/434 (50%), Positives = 290/434 (66%), Gaps = 5/434 (1%)
Query: 16 VIKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKA 75
V+++L L++ ++ Q Y + A R H A +TDFG VGDG T NTKA
Sbjct: 14 VLQVL--LVSATIVVAQTQWASGVWGMYCEDLTASVERPHRASVTDFGAVGDGATLNTKA 71
Query: 76 FNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLP 135
F A+ +L +A GGAQL VP G+WLTGSF+L SH TL + KDA++L S D S+WP++
Sbjct: 72 FQNALFHLDSFAKKGGAQLFVPAGRWLTGSFSLISHLTLSLDKDAVILGSPDSSDWPVID 131
Query: 136 PLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYL 195
LPSYGRGR+ PG R SLIFG+NLTDV++TG N T++GQG WW + N TRP L
Sbjct: 132 ALPSYGRGRELPGKRHQSLIFGSNLTDVIITGANGTVDGQGAVWWDWFHNHTLNYTRPPL 191
Query: 196 IEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTR 255
+E+M+S V ISNLT I+SP WN+HPVY S VL+Q LTI API SPNTDGI+PDS TN
Sbjct: 192 VELMYSTRVVISNLTFINSPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSTNVC 251
Query: 256 IEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKD 315
IED Y+ +GDD + +KSGWDEYGI P+ ++ IR + + +SA +A GSEMSGGI D
Sbjct: 252 IEDCYVRNGDDIIVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGLAFGSEMSGGISD 311
Query: 316 VRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDP 375
VRAE + +N+ G+RIKTA GRG YVK +YV ++ + +TG+YG HPD G+D
Sbjct: 312 VRAEGVRIVNSVHGIRIKTAPGRGGYVKNVYVADVSFDNVSIAIRITGNYGEHPDDGYDR 371
Query: 376 KALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQ 435
ALPT++ I +D+V N+ + L GI D F+GIC+SNV++ + WNC+ ++
Sbjct: 372 NALPTISNITIKDVVGVNIGVAGMLQGIPGDSFSGICLSNVSLSVRSTDP---WNCSLVE 428
Query: 436 GITSRVTPQACELL 449
G +S V+P+ CE L
Sbjct: 429 GYSSSVSPEVCEQL 442
>gi|222636745|gb|EEE66877.1| hypothetical protein OsJ_23693 [Oryza sativa Japonica Group]
Length = 506
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/425 (51%), Positives = 287/425 (67%), Gaps = 4/425 (0%)
Query: 43 YTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWL 102
Y + A R HS +T+FG V DG T NTKAF AI LS +A GGA+L VP G+WL
Sbjct: 59 YCNDLTASVHRPHSVSITEFGAVNDGVTLNTKAFKNAIFYLSSFADKGGAELFVPAGRWL 118
Query: 103 TGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTD 162
TGSFNL SH T+ + DA+++ SQD S+WP++ PLPSYGRGR+ PG R SLIFG+NLTD
Sbjct: 119 TGSFNLISHLTVSLDADAVIIGSQDSSDWPVIDPLPSYGRGRELPGKRHQSLIFGSNLTD 178
Query: 163 VVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPV 222
V++TG N TI+GQGE WW + N TRP L+E+M+SD V ISNLT +++P WN+HPV
Sbjct: 179 VIITGANGTIDGQGELWWNWFHNHTLNYTRPPLLELMYSDRVVISNLTFMNAPFWNIHPV 238
Query: 223 YSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVG 282
Y S VL+Q LTI API SPNTDGI+PDS +N IED YI +GDD V +KSGWDEYGI
Sbjct: 239 YCSQVLVQHLTILAPISSPNTDGIDPDSSSNVCIEDCYIRNGDDIVVIKSGWDEYGISFA 298
Query: 283 MPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYV 342
P+ ++ IR + + +SA IA GSEMSGGI DVRAE + IN+ G+RIKTA GRG YV
Sbjct: 299 HPSSNISIRNITGQTRNSAGIAFGSEMSGGISDVRAEGLRFINSVHGIRIKTAPGRGGYV 358
Query: 343 KEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDG 402
K IY+ ++M + +TG+YG HPD +D ALP ++ I +++V N+ + L G
Sbjct: 359 KNIYIADVSMDNVSIAIRITGNYGEHPDDNYDKNALPVISNITIKNVVGVNIGTAGMLLG 418
Query: 403 IRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL-PKKEPTDCFFPD 461
I+ D F+ IC+SNV+ L+ K + WNC+ I+G ++ V P+ CE L P P +
Sbjct: 419 IQGDIFSNICLSNVS--LSSKSAD-PWNCSLIEGFSNSVAPEICEQLRPSPGPGQVCYDG 475
Query: 462 DKLPI 466
+ P+
Sbjct: 476 NSYPV 480
>gi|359480238|ref|XP_002273855.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
gi|297744085|emb|CBI37055.3| unnamed protein product [Vitis vinifera]
Length = 466
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 211/410 (51%), Positives = 285/410 (69%), Gaps = 7/410 (1%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +T+FG VGDG T NTKAF AI L+ +A GGAQL VP G+WLTGSF+L SH
Sbjct: 39 RPHSVAITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFDLISHL 98
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL++ KDA++L S + ++WP++ PLPSYGRGR+ PG R SLI+G NLTDV+VTG N TI
Sbjct: 99 TLWLDKDAVILGSMNSNDWPVIDPLPSYGRGRELPGRRHRSLIYGCNLTDVIVTGDNGTI 158
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW ++KK N TRP+L+E + S V ISN+T ++SP W +HPVY S V+IQ +
Sbjct: 159 DGQGSIWWNWFQKKTLNYTRPHLVEFINSTGVVISNVTFLNSPFWTIHPVYCSQVIIQNV 218
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TI AP+DSPNTDGI+PDS + IED YI +GDD +A+KSGWDEYGI P+ ++IIRR
Sbjct: 219 TILAPLDSPNTDGIDPDSSNDVCIEDCYISTGDDLIAIKSGWDEYGISYARPSTNIIIRR 278
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
L+ + SA IA+GSEMSGG+ +V AE + N+++G+RIKT+ GRG YV+ IY+ M +
Sbjct: 279 LVGKTNSSAGIAIGSEMSGGVSEVHAESLQFFNSKTGIRIKTSPGRGGYVRNIYISDMNL 338
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+K TG YG HPD +DP ALP + I +D++ +N+ + L+GI D F IC
Sbjct: 339 VDVKIAIRFTGQYGEHPDEFYDPTALPIIENITVKDVMGENIKFAGLLEGIEGDNFVNIC 398
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKK----EPTDCF 458
+SN+T+ +T E WNC+ I G + V+P+ACE L ++ DC+
Sbjct: 399 LSNITLNVT---SESPWNCSYIHGYSDLVSPEACEPLGERIYPGHVLDCY 445
>gi|218199365|gb|EEC81792.1| hypothetical protein OsI_25505 [Oryza sativa Indica Group]
Length = 506
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/425 (50%), Positives = 286/425 (67%), Gaps = 4/425 (0%)
Query: 43 YTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWL 102
Y + A R HS +T+FG V DG T NTKAF AI LS +A GGA+L VP G+WL
Sbjct: 59 YCNDLTASVHRPHSVSITEFGAVNDGVTLNTKAFKNAIFYLSSFADKGGAELFVPAGRWL 118
Query: 103 TGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTD 162
TGSFNL SH T+ + DA+++ SQD S+WP++ PLPSYGRGR+ PG R SLIFG+NLTD
Sbjct: 119 TGSFNLISHLTVSLDADAVIIGSQDSSDWPVIDPLPSYGRGRELPGKRHQSLIFGSNLTD 178
Query: 163 VVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPV 222
V++TG N TI+GQGE WW + N TRP L+E+M+SD V ISNLT +++P WN+HPV
Sbjct: 179 VIITGANGTIDGQGELWWNWFHNHTLNYTRPPLLELMYSDRVVISNLTFMNAPFWNIHPV 238
Query: 223 YSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVG 282
Y S VL+Q LTI API SPNTDGI+PDS +N IED YI +GDD V +KSGWDEYGI
Sbjct: 239 YCSQVLVQHLTILAPISSPNTDGIDPDSSSNVCIEDCYIRNGDDIVVIKSGWDEYGISFA 298
Query: 283 MPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYV 342
P+ ++ IR + + +SA IA GSEMSGGI DVRAE + IN+ G+RIKTA GRG YV
Sbjct: 299 HPSSNISIRNITGQTRNSAGIAFGSEMSGGISDVRAEGLRFINSVHGIRIKTAPGRGGYV 358
Query: 343 KEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDG 402
K IY+ ++M + +TG+YG HPD +D LP ++ I +++V N+ + L G
Sbjct: 359 KNIYIADVSMDNVSIAIRITGNYGEHPDDNYDKNVLPVISNITIKNVVGVNIGTAGMLLG 418
Query: 403 IRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL-PKKEPTDCFFPD 461
I+ D F+ IC+SNV+ L+ K + WNC+ ++G ++ V P+ CE L P P +
Sbjct: 419 IQGDIFSNICLSNVS--LSSKSAD-PWNCSLVKGFSNSVAPEICEQLRPSPGPGQVCYDG 475
Query: 462 DKLPI 466
+ P+
Sbjct: 476 NSYPV 480
>gi|242043478|ref|XP_002459610.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
gi|241922987|gb|EER96131.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
Length = 499
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/397 (53%), Positives = 274/397 (69%), Gaps = 3/397 (0%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HSA +TDFG VGDG T NTKAF A+ L+ +A GGAQL VP G+WLTGSF+L SH
Sbjct: 56 RPHSASITDFGAVGDGATLNTKAFQNALFYLNSFAKKGGAQLFVPAGRWLTGSFSLISHL 115
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL + KDA++L S D S+WP++ LPSYGRGR+ PG R SLIFG+NLTDV++TG N TI
Sbjct: 116 TLSLDKDAVILGSTDSSDWPVIDALPSYGRGRELPGKRHQSLIFGSNLTDVIITGSNGTI 175
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW + N TRP L+E+M+S V ISNLT I+SP WN+HPVY S VL Q L
Sbjct: 176 DGQGAVWWDWFHNHTLNYTRPPLVELMYSTRVVISNLTFINSPFWNIHPVYCSQVLAQHL 235
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TI API SPNTDGI+PDS TN IED YI +GDD V +KSGWDEYGI P+ ++ IR
Sbjct: 236 TILAPISSPNTDGIDPDSSTNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRN 295
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ + +SA +A GSEMSGGI DVRAE I +N+ G+RIKTA GRG YVK +YV ++
Sbjct: 296 ITGQTRNSAGLAFGSEMSGGISDVRAEGIRIVNSVHGIRIKTAPGRGGYVKNVYVADVSF 355
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+ +TG+YG HPD ++ ALPT++ I +D+V N+ + L GI D F+ IC
Sbjct: 356 DNVSIAIRITGNYGEHPDDRYNKSALPTISNITIKDVVGVNIGVAGMLQGIPGDNFSNIC 415
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL 449
+SNV++ + WNC+ ++G ++ V+P+ CE L
Sbjct: 416 LSNVSLSVRSTDP---WNCSLVEGYSNSVSPEVCEQL 449
>gi|357111082|ref|XP_003557344.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 479
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/432 (49%), Positives = 286/432 (66%), Gaps = 4/432 (0%)
Query: 18 KILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFN 77
I LL ++ ++ + Y + A R HS +T+FG VGDG T NTKAF
Sbjct: 6 SIFQALLVFTTVAAEI-QWSSVSGMYCKDLTASVYRPHSVSITEFGAVGDGMTRNTKAFQ 64
Query: 78 TAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPL 137
AI LS +A GGAQL VP G+WLTGSF+L SH T+ + KDA++L S D S+WP++ PL
Sbjct: 65 NAIFYLSSFANKGGAQLFVPAGRWLTGSFSLVSHLTVSLDKDAVILGSPDSSDWPVIDPL 124
Query: 138 PSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIE 197
PSYGRGR+ PG R SLIFG+NLTDV++TG N TI+GQGE WW + N TRP L+E
Sbjct: 125 PSYGRGRELPGKRHQSLIFGSNLTDVIITGANGTIDGQGEIWWNWFHNHTLNYTRPPLVE 184
Query: 198 VMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIE 257
M+S V +SNLT +SP WN+HPVY S VL+Q LTI API SPNTDGI+PDS TN IE
Sbjct: 185 FMYSTRVVVSNLTFTNSPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSTNVCIE 244
Query: 258 DNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVR 317
D YI +GDD V +KSGWDEYGI P+ ++ I+ + + SA IALGSEMSGGI +VR
Sbjct: 245 DCYIRNGDDIVVIKSGWDEYGISFAYPSSNISIQNITGQTRSSAGIALGSEMSGGISNVR 304
Query: 318 AEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKA 377
A I +N+ G+RIKTA GRG YVK +Y+ ++M + +T +YG HPD +D A
Sbjct: 305 AVGIRIVNSVHGIRIKTAPGRGGYVKNVYIADVSMDNVSIAIRITANYGEHPDDKYDKNA 364
Query: 378 LPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGI 437
LP ++ I ++++ N+ + L GI+ D F+ IC+SNVT L+ K + WNC+ ++G
Sbjct: 365 LPIISNITIKNVIGANIGVAGMLQGIQGDSFSNICLSNVT--LSTKSMD-PWNCSLVEGY 421
Query: 438 TSRVTPQACELL 449
++ V+P+ CE L
Sbjct: 422 SNSVSPEICEEL 433
>gi|356572848|ref|XP_003554577.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 467
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/416 (48%), Positives = 285/416 (68%), Gaps = 8/416 (1%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +T+FG VGDG T NTKAF AI L+ +A GGA+L VP G+WLTGSF+L SH
Sbjct: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGRWLTGSFDLISHL 98
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL++ KDA++L S + +WP++ PLPSYGRGR+ PGGR SLI+G NLTDV++TG N TI
Sbjct: 99 TLWLDKDAVILGSTNPEDWPVVDPLPSYGRGRELPGGRHKSLIYGHNLTDVIITGNNGTI 158
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW ++ + + TRP+L+E+M S V ISNLT ++SP W +HPVY S V +Q +
Sbjct: 159 DGQGSIWWNRFMNRTLDYTRPHLVELMNSTGVLISNLTFLNSPFWTIHPVYCSQVTVQNV 218
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
I AP DSPNTDGI+PDS N IED YI +GDD +A+KSGWDEYGI G P+ ++II R
Sbjct: 219 RILAPHDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSTNIIIHR 278
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
L+ ++ IA+GSEMSGG+ +V AEDI ++ +G+RIKT+ GRG YV+ IYV +++
Sbjct: 279 LVG-KTQTSGIAIGSEMSGGVSEVHAEDIQFYDSYNGIRIKTSPGRGGYVRNIYVSNVSL 337
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+ W TG YG HPD +DP ALP + + +D+V +N+ + ++GI D F IC
Sbjct: 338 ANVDIAIWFTGSYGEHPDDAYDPNALPVIEKVTIKDVVGENIKTAGLIEGIEGDNFVNIC 397
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKK----EPTDCFFPDDKL 464
+SN+ + +T WNC+ ++G + V P+ACE L ++ +DC++ +++
Sbjct: 398 LSNIILNVTSN---YPWNCSYVKGYSDLVQPEACEPLKERIFPDHCSDCYYLTNQI 450
>gi|356501839|ref|XP_003519731.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/453 (47%), Positives = 294/453 (64%), Gaps = 10/453 (2%)
Query: 16 VIKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKA 75
+++++ L L L S + I + R HS +T+FG VGDG T NTKA
Sbjct: 12 LLQLVDVFLVLALFSCSTWTVWSSSCCNQINLNEV--RPHSVSITEFGAVGDGITLNTKA 69
Query: 76 FNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLP 135
F AI L+ +A GGA+L VP G+WLTGSF+L SH TL++ DA++L S + +WP++
Sbjct: 70 FQNAIFYLNSFADKGGAKLFVPAGRWLTGSFDLISHLTLWLDNDAVILGSTNSDDWPVVD 129
Query: 136 PLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYL 195
PLPSYGRGR+ PGGR SLI+G NLTDVV+TG N TI+GQG WW + K N TRP+L
Sbjct: 130 PLPSYGRGRELPGGRHRSLIYGCNLTDVVITGNNGTIDGQGSIWWNNFWNKTLNYTRPHL 189
Query: 196 IEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTR 255
+E+M S V ISN+T ++SP W +HPVY S+V IQ +TI AP+ SPNTDGINPDS N
Sbjct: 190 VELMNSTGVLISNVTFLNSPFWTIHPVYCSHVTIQNVTIIAPLSSPNTDGINPDSSDNVC 249
Query: 256 IEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKD 315
IED YI +GDD +++KSGWD YGI G P+ ++ IRRLI SA IA+GSEMSGG+ +
Sbjct: 250 IEDCYISTGDDLISIKSGWDGYGISFGRPSTNINIRRLIG-KTTSAGIAIGSEMSGGVSE 308
Query: 316 VRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDP 375
V AEDI ++ S +RIKT+ GRG YV+ +Y+ M + + TG YG HPD +DP
Sbjct: 309 VHAEDIYIFDSHSAIRIKTSPGRGGYVRNVYISNMILANVDIAIRFTGLYGEHPDDTYDP 368
Query: 376 KALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQ 435
ALP + I +D++ V + + GI+ D F IC+SN+T+ ++ K L WNC+ I+
Sbjct: 369 DALPVIERITIKDVIGVKVKHAGLIQGIKGDNFVNICLSNITLNVSSK---LPWNCSYIK 425
Query: 436 GITSRVTPQACELLPKK----EPTDCFFPDDKL 464
G + V+P+ACE L ++ +DC++ + L
Sbjct: 426 GFSDLVSPEACEPLKERIFPEHCSDCYYLPNHL 458
>gi|224064770|ref|XP_002301554.1| predicted protein [Populus trichocarpa]
gi|222843280|gb|EEE80827.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/412 (50%), Positives = 282/412 (68%), Gaps = 8/412 (1%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +T+FG VGDG T NTKAF AI L+ +A GGA+L VP G+WLTGSF+L SH
Sbjct: 39 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPTGRWLTGSFDLISHL 98
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL++ KDA++L S + +WP++ PLPSYGRGR+ PG R SLI+G NLTDV++TG N TI
Sbjct: 99 TLWLDKDAVILGSTNSDDWPVIDPLPSYGRGRELPGRRHKSLIYGRNLTDVIITGDNGTI 158
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW +R + N TRP+L+E M + V ISNLT I+SP W +HPVY S V++Q +
Sbjct: 159 DGQGSIWWDWFRNQTLNYTRPHLVEFMNTTGVVISNLTFINSPFWTIHPVYCSQVIVQNV 218
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TI AP+DSPNTDGI+PDS + +ED Y+ +GDD +A+KSGWDEYG+ G P++++ IRR
Sbjct: 219 TILAPLDSPNTDGIDPDSSDDVCVEDCYVSTGDDIIAIKSGWDEYGMSYGRPSKNITIRR 278
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
L+ + SA IA+GSEMSGG+ +V AE++ N+ +G+RIKT+ GRG YV+ IY+ M++
Sbjct: 279 LVGQTT-SAGIAIGSEMSGGVSEVHAENLRFYNSTTGIRIKTSPGRGGYVRNIYISNMSL 337
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+K TG YG HPD +DP ALP + I D+ NV + L+GI D F IC
Sbjct: 338 TDVKTAISFTGRYGEHPDEYYDPTALPLIERITVEDVAGQNVKYAGLLEGIEGDTFLDIC 397
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKK----EPTDCFFP 460
+ N+ + +T K WNC+ IQG + V+P+ CE L ++ +DC+ P
Sbjct: 398 LLNINLSVTSKSP---WNCSYIQGYSDTVSPEICEPLRERIFPDHYSDCYSP 446
>gi|388521929|gb|AFK49026.1| unknown [Lotus japonicus]
Length = 388
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 198/268 (73%), Positives = 235/268 (87%), Gaps = 2/268 (0%)
Query: 185 KKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTD 244
K QF +TRPY+IE+M+S+ +QISNLTL++SPSW VHP+YSS+++IQGLTI AP+DSPNTD
Sbjct: 119 KGQFTLTRPYMIEIMYSNQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTD 178
Query: 245 GINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIA 304
GI+PDSC+NTRIED YIVSGDDC+AVKSGWDEYGIKVGMP+QH+IIRRL CISPDSA IA
Sbjct: 179 GIDPDSCSNTRIEDCYIVSGDDCIAVKSGWDEYGIKVGMPSQHIIIRRLTCISPDSAMIA 238
Query: 305 LGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGD 364
LGSEMSGGI+D+RAED+TAINTQS VRIKTAVGRGAYV+ I+V M + TMKYVFWMTG
Sbjct: 239 LGSEMSGGIQDIRAEDLTAINTQSAVRIKTAVGRGAYVRNIFVEGMNLFTMKYVFWMTGS 298
Query: 365 YGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKP 424
YGSHPD GFDPKALPT+TGINYRD++A NV AKL+GI NDPFTGICISN I+ +
Sbjct: 299 YGSHPDTGFDPKALPTITGINYRDVIAKNVAYPAKLEGIANDPFTGICISNANIE--KVG 356
Query: 425 KELQWNCTNIQGITSRVTPQACELLPKK 452
K+L WNCT++ G+TS V+P+ C LL +K
Sbjct: 357 KKLAWNCTDVHGVTSNVSPEPCALLQEK 384
>gi|356533489|ref|XP_003535296.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/458 (46%), Positives = 298/458 (65%), Gaps = 20/458 (4%)
Query: 16 VIKILSTLLTLGLLSPQV-----AECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKT 70
+++++ L L L S + C NSY + R HS +T+FG VGDG T
Sbjct: 12 LLQLVDGFLVLALFSCSTWTVWSSSCCNQINSYEV-------RPHSVSITEFGAVGDGIT 64
Query: 71 SNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESE 130
NT AF AI L+ +A GGA+L VP G+WLTGSF+L SH TL++ DA++L S + +
Sbjct: 65 LNTIAFQNAIFYLNSFADKGGAKLFVPAGRWLTGSFDLISHLTLWLDNDAVILGSMNSDD 124
Query: 131 WPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNV 190
WP++ PLPSYG GR+ PGGR SLI+G NLTDVV+TG N TI+GQG WW + K N
Sbjct: 125 WPVVDPLPSYGHGRELPGGRHRSLIYGRNLTDVVITGNNGTIDGQGSIWWNNFWNKTLNY 184
Query: 191 TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDS 250
TRP+L+E+M S V ISN+T ++SP W +HPVY S+V IQ +TI AP+ SPNTDGINPDS
Sbjct: 185 TRPHLVELMNSTGVLISNVTFMNSPFWTIHPVYCSHVTIQNVTIIAPLSSPNTDGINPDS 244
Query: 251 CTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMS 310
N IED YI +GDD +++KSGWD YGI G P+ ++ IRRLI SA IA+GSEMS
Sbjct: 245 SDNVCIEDCYISTGDDLISIKSGWDGYGISFGRPSTNINIRRLIG-KTTSAGIAIGSEMS 303
Query: 311 GGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPD 370
GG+ +V AEDI ++ S +RIKT+ GRG YV+ +Y+ M + + TG YG HPD
Sbjct: 304 GGVSEVHAEDIYIFDSHSAIRIKTSPGRGGYVRNVYISNMILVNVDIAIRFTGLYGEHPD 363
Query: 371 PGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWN 430
+DP ALP + I +D++ + V ++ + GI+ D F IC+SN+T+ ++ K+L WN
Sbjct: 364 DTYDPDALPVIERITIKDVIGEKVKRAGLIQGIKGDNFVNICLSNITLNVS---KKLPWN 420
Query: 431 CTNIQGITSRVTPQACELLPKK----EPTDCFFPDDKL 464
C+ ++G + V+P+ACE L ++ +DC++ + L
Sbjct: 421 CSYVKGYSDLVSPEACEPLRERIFPEHCSDCYYLPNHL 458
>gi|357122663|ref|XP_003563034.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 475
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 207/405 (51%), Positives = 274/405 (67%), Gaps = 7/405 (1%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +T+FG VGDG NTKAF AI L+ +A GGAQL VP G+WLTGSF+L SH
Sbjct: 39 RPHSVTITEFGAVGDGVALNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFSLISHL 98
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL + KDA+++ S D S WP++ PLPSYGRGR+ PG R SLIFG NLTDV++TG N TI
Sbjct: 99 TLSLDKDAVIIGSPDSSNWPVIDPLPSYGRGRELPGERHQSLIFGYNLTDVIITGANGTI 158
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW + N TRP+L+E+M+S NV ISNLT +SP WN+HPVY S VL++ L
Sbjct: 159 DGQGAVWWDWFHNHTLNYTRPHLVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVEHL 218
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TI AP+DSPNTDGINPDS TN I+ Y+ +GDD + +KSGWDEYGI P+ ++ I
Sbjct: 219 TILAPLDSPNTDGINPDSSTNICIKHCYVRNGDDVIVIKSGWDEYGISFAHPSSNISITN 278
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ + A IA+GSEMSGGI +VRAE + +N+ G+RIKTA GRG YV+ +Y+ ++M
Sbjct: 279 ITGETRGGAGIAIGSEMSGGISEVRAERLRIVNSLHGIRIKTAPGRGGYVRNVYIADVSM 338
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+ +TG+YG HPD +D ALP ++ I ++V NV + L+GI D F+ IC
Sbjct: 339 HNVSMAIRITGNYGEHPDNNYDRNALPMISNITIENVVGINVGIAGILEGIEGDNFSSIC 398
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTDC 457
ISNV++ + WNC+ IQG ++ V P++C+ L TDC
Sbjct: 399 ISNVSLSVQSMHP---WNCSLIQGYSNSVIPESCDQL----RTDC 436
>gi|224130826|ref|XP_002320934.1| predicted protein [Populus trichocarpa]
gi|222861707|gb|EEE99249.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/397 (51%), Positives = 274/397 (69%), Gaps = 4/397 (1%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +T+FG VGDG T NTKAF AI L+ +A GGA+L VP G+WLTGSF+L SH
Sbjct: 32 RPHSVAITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 91
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL++ KDA++L S + +WP++ LPSYGRGR+ PG R SLI+G NLTDV++TG N TI
Sbjct: 92 TLWLDKDAIILGSTNSDDWPVIDSLPSYGRGRELPGRRHKSLIYGRNLTDVIITGDNGTI 151
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW +R + + TRP+L+E+M + V ISNLT ++SP W +HPVY S V++Q +
Sbjct: 152 DGQGSIWWNWFRNETLDYTRPHLVELMNTTGVVISNLTFLNSPFWTIHPVYCSQVIVQNV 211
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TI AP+DSPNTDGI+PDS + IED YI +GDD +A+KSGWDEYG P++++ IR
Sbjct: 212 TILAPLDSPNTDGIDPDSSDDVCIEDCYISTGDDIIAIKSGWDEYGTSYARPSKNITIRG 271
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
L+ SA IA+GSEMSGG+ +V AE++T N+ +G+RIKTA GRG YV+ IY+ M++
Sbjct: 272 LVG-QTTSAGIAIGSEMSGGVSEVHAENLTFYNSTTGIRIKTAPGRGGYVRNIYISNMSL 330
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+K TG YG HPD +DPKALP + I D+ NV + L+G+ D F IC
Sbjct: 331 TDVKTAIRFTGQYGDHPDESYDPKALPLIERITIDDVTGQNVKYAGLLEGLEGDTFLDIC 390
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL 449
+SN+ + +T K WNC+ IQG + V+P+ CE L
Sbjct: 391 LSNINLSVTSKSP---WNCSYIQGYSEAVSPEICEPL 424
>gi|242032389|ref|XP_002463589.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
gi|241917443|gb|EER90587.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
Length = 459
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 201/397 (50%), Positives = 272/397 (68%), Gaps = 3/397 (0%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +T+FG +GDG T NTKAF AI L+ +A GGAQL VP G+WLTGSFNL SH
Sbjct: 23 RPHSVTITEFGAIGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFNLISHL 82
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL + KDA+++ S D S WP++ PLPSYGRGR+ PG R SLIFG NLTDV++TG N +I
Sbjct: 83 TLSLDKDAVIIGSPDSSHWPVIDPLPSYGRGRELPGKRHQSLIFGLNLTDVIITGANGSI 142
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW +R N TRP+L+E+M+S NV ISNLT +SP WN+HPVY S VL+Q +
Sbjct: 143 DGQGAIWWGWFRNHTLNYTRPHLVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVQHV 202
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TI AP++SPNTDG++PDS TN I Y+ +GDD + +KSGWDEYGI P+ ++ I
Sbjct: 203 TILAPLNSPNTDGVSPDSSTNVCINHCYVRNGDDVIVIKSGWDEYGISFAQPSSNISISD 262
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ + A IA GSEMSGGI +VRA + +N+ G+RIKTA GRG YVK +Y+ ++M
Sbjct: 263 ITGETRGGAGIAFGSEMSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVKNVYIADVSM 322
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+ +TG+YG HPD +D ALP ++ I +D+V N+ + L+GI+ D F+ IC
Sbjct: 323 DNVSMAIRITGNYGEHPDDKYDRTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNIC 382
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL 449
+SNV++ + WNC+ I+G ++ V P++CE L
Sbjct: 383 LSNVSLSVQSAHP---WNCSLIEGYSNSVIPESCEQL 416
>gi|359807069|ref|NP_001241086.1| uncharacterized protein LOC100817309 precursor [Glycine max]
gi|255636991|gb|ACU18828.1| unknown [Glycine max]
Length = 467
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/416 (48%), Positives = 283/416 (68%), Gaps = 8/416 (1%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +T+FG VGDG T NTKAF AI L+ +A GGA+L VP G+WLTGSF+L SH
Sbjct: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGRWLTGSFDLISHL 98
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL + KDA++L S + +WP++ PLPSYGRGR+ PGGR SLI+G NLTDV++TG N TI
Sbjct: 99 TLSLDKDAVILGSTNPEDWPVVDPLPSYGRGRELPGGRHKSLIYGHNLTDVIITGNNGTI 158
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW ++ + + TRP+L+E+M S V ISNLT ++SP W +HPVY S V +Q +
Sbjct: 159 DGQGSIWWNRFWNRSLDYTRPHLVELMNSTGVLISNLTFLNSPFWTIHPVYCSQVTVQNV 218
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
I AP DSPNTDGI+PDS N IED YI +GDD +A+KSGWDEYGI G P+ ++II R
Sbjct: 219 RILAPHDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSTNIIIHR 278
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
L+ + ++ IA+GSEMSGG+ +V AEDI ++ + +RIKT+ GRG YV+ IYV +T+
Sbjct: 279 LVGRT-QTSGIAIGSEMSGGVSEVHAEDIQFYDSYNAIRIKTSPGRGGYVRNIYVSNVTL 337
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+ TG YG HPD ++P ALP + I +D+V +N+ + ++GI D F IC
Sbjct: 338 ANVDIAITFTGLYGEHPDDAYNPNALPVIEKITIKDVVGENIKTAGLIEGIEGDNFVNIC 397
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKK----EPTDCFFPDDKL 464
+SN+ + +T WNC+ ++G + V P+ACE L ++ +DC++ +++
Sbjct: 398 LSNIILNVTSN---YPWNCSYVKGYSDLVQPEACEPLKERIFPGHCSDCYYLTNQI 450
>gi|297817560|ref|XP_002876663.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322501|gb|EFH52922.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 197/411 (47%), Positives = 278/411 (67%), Gaps = 5/411 (1%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +T+FG VGDG T NTKAF A+ L+ ++ GGA+L VP G+WLTGSF+L SH
Sbjct: 39 RPHSVSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISHL 98
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL++ K A +L S WP++ PLPSYGRGR+ PG R SLI+G NLTDVV+TG N TI
Sbjct: 99 TLWLDKGATILGSTSSENWPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGENGTI 158
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW +R + N TRP+L+E+M S + ISNLT ++SP WN+HPVY +V+++ L
Sbjct: 159 DGQGSVWWDWFRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNL 218
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TI AP++SPNTDG++PDS TN IED YIV+GDD V++KSGWDEYGI P+ + I R
Sbjct: 219 TILAPLESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINR 278
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
L + S+ IA+GSEMSGG+ ++ +D+ N+ +G+RIKT+ GRG YV+ +++ + +
Sbjct: 279 LTGQTTSSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSPGRGGYVRNVHILNVKL 338
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+K TG YG HPD FDPKALP + I + ++ D + + L+GI D F IC
Sbjct: 339 DNVKKAIRFTGKYGEHPDEKFDPKALPAIEKITFENVNGDGIGVAGLLEGIAGDEFKNIC 398
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQ-ACELLPK----KEPTDCF 458
NVT+++ + K+ W C+N++G + V+P+ C+ L + + +DCF
Sbjct: 399 FLNVTLRVKKNSKKSPWECSNVRGYSQWVSPEITCDSLKESIFPEHQSDCF 449
>gi|226497942|ref|NP_001151479.1| polygalacturonase precursor [Zea mays]
gi|195647062|gb|ACG42999.1| polygalacturonase [Zea mays]
Length = 477
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/408 (48%), Positives = 274/408 (67%), Gaps = 5/408 (1%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +T+FG VGDG T NTKAF AI L+ +A GGAQL VP G+WLTGSF+L SH
Sbjct: 39 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFHLISHL 98
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL + KDA+++ S D S WP++ PLPSYGRGRD PG R SLIFG NLTDV++TG N +I
Sbjct: 99 TLSLDKDAIIIGSPDSSHWPVIDPLPSYGRGRDLPGKRHQSLIFGLNLTDVIITGANGSI 158
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW + N TRP+L+E+M+S NV ISNLT +SP WN+HPVY S VL+Q +
Sbjct: 159 DGQGAIWWGWFHNHTLNYTRPHLVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVQHV 218
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TI AP++SPNTDG+ PDS TN I Y+ +G D + +KSGWDEYGI P+ ++ I
Sbjct: 219 TILAPLNSPNTDGVTPDSSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISD 278
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ + + IA GSEMSGGI +VRA + +N+ G+RIKTA GRG YV+ +Y+ ++M
Sbjct: 279 ITGETRGGSGIAFGSEMSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSM 338
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+ +TG+YG HPD +D ALP ++ I +D+V N+ + L+GI+ D F+ IC
Sbjct: 339 DNVSMAIRITGNYGEHPDDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNIC 398
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPK--KEPTDCF 458
+SNV++ + WNC+ I+G ++ V P++CE L ++ + C+
Sbjct: 399 LSNVSLSVQSAHP---WNCSLIEGYSNSVIPESCEQLRSNCRQTSICY 443
>gi|18412253|ref|NP_567126.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|11762132|gb|AAG40344.1|AF324992_1 AT3g62110 [Arabidopsis thaliana]
gi|23397166|gb|AAN31866.1| unknown protein [Arabidopsis thaliana]
gi|332646790|gb|AEE80311.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 471
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 196/411 (47%), Positives = 278/411 (67%), Gaps = 5/411 (1%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +T+FG VGDG T NTKAF A+ L+ ++ GGA+L VP G+WLTGSF+L SH
Sbjct: 39 RPHSVSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISHL 98
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL++ K A +L S WP++ PLPSYGRGR+ PG R SLI+G NLTDVV+TG N TI
Sbjct: 99 TLWLDKGATILGSTSSENWPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGENGTI 158
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW +R + N TRP+L+E+M S + ISNLT ++SP WN+HPVY +V+++ L
Sbjct: 159 DGQGTVWWDWFRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNL 218
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TI AP++SPNTDG++PDS TN IED YIV+GDD V++KSGWDEYGI P+ + I R
Sbjct: 219 TILAPLESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINR 278
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
L + S+ IA+GSEMSGG+ ++ +D+ N+ +G+RIKT+ GRG YV+ +++ + +
Sbjct: 279 LTGQTTSSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSAGRGGYVRNVHILNVKL 338
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+K TG YG HPD +DPKALP + I + ++ D + + L+GI D F IC
Sbjct: 339 DNVKKAIRFTGKYGEHPDEKYDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDVFKNIC 398
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQ-ACELLPK----KEPTDCF 458
NVT+++ + K+ W C+N++G + V+P+ C+ L + + +DCF
Sbjct: 399 FLNVTLRVKKNSKKSPWECSNVRGYSQWVSPEITCDSLKESIFPEHGSDCF 449
>gi|115456423|ref|NP_001051812.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|40714685|gb|AAR88591.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|108711938|gb|ABF99733.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|108711939|gb|ABF99734.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113550283|dbj|BAF13726.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|215694675|dbj|BAG89866.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 476
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/405 (50%), Positives = 275/405 (67%), Gaps = 7/405 (1%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +T+FG VGDG T NTKAF AI L+ +A GGAQL VP G+WLTGSF+L SH
Sbjct: 39 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFSLISHL 98
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL + KDA ++ S D S+WP++ PLPSYGRGR+ PG R SLIFGTNLTDV++TG N TI
Sbjct: 99 TLSLDKDAEIIGSPDSSDWPVIDPLPSYGRGRELPGKRHQSLIFGTNLTDVIITGANGTI 158
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW + N TRP+L+E+M+S +V ISNLT +SP WN+HPVY S VL+Q +
Sbjct: 159 DGQGAIWWDWFHSNTLNYTRPHLVELMYSTDVVISNLTFKNSPFWNIHPVYCSQVLVQHV 218
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TI AP++SPNTDGI+PDS TN I+ Y+ +GDD + +KSGWDEYGI P+ ++ I
Sbjct: 219 TILAPLNSPNTDGIDPDSSTNVCIDHCYVRNGDDVIVIKSGWDEYGISFARPSTNISISN 278
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ + A IA GSEMSGGI +VRAE + +N+ G+RIKTA GRG YVK +Y+ ++M
Sbjct: 279 ITGETRGGAGIAFGSEMSGGISEVRAEGLRIVNSMHGIRIKTAPGRGGYVKNVYISDVSM 338
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+ +TG++G HPD +D ALP ++ I ++V NV + L+GI D F+ IC
Sbjct: 339 DNVSMAIRITGNFGEHPDDKYDRNALPMISNITIENVVGVNVGVAGILEGIEGDNFSSIC 398
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTDC 457
+SNV++ + WNC+ I+G ++ V P++CE L TDC
Sbjct: 399 LSNVSLSVQSMHP---WNCSLIEGYSNSVIPESCEQL----RTDC 436
>gi|302809176|ref|XP_002986281.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
gi|300145817|gb|EFJ12490.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
Length = 445
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/396 (51%), Positives = 276/396 (69%), Gaps = 1/396 (0%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +T+FG VGDG+T NT AF A+ L +A GGAQL VP G+WLTGSF L SH
Sbjct: 32 RPHSVSITEFGAVGDGQTVNTVAFQNAVFYLQSFAHKGGAQLYVPAGRWLTGSFTLISHL 91
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL++ +++LASQD +WPL+ PLPSYGRGRD PG R SL++G ++ DVV+TGGN TI
Sbjct: 92 TLFLDTGSVILASQDPHDWPLIDPLPSYGRGRDLPGRRHRSLVYGKDVEDVVITGGNGTI 151
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW +R + N TR +L+E + S N+ +SN++L++SPSW +HPVY SNV+I+G+
Sbjct: 152 DGQGSVWWHWFRNQSLNYTRGHLVEFINSKNIVVSNISLLNSPSWTIHPVYCSNVVIRGV 211
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
T+ AP +SPNTDG+ PDSCT IED I SG D V+VKSGWDEYGI+VG+P+ ++IRR
Sbjct: 212 TVVAPSESPNTDGVQPDSCTGVCIEDCAITSGGDAVSVKSGWDEYGIQVGLPSAKVVIRR 271
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ +P SAAIA GSEMSGGIK+V ED+ N++ GV +KT GRG YVK I V +TM
Sbjct: 272 ITAQAPASAAIAFGSEMSGGIKNVVVEDVRVFNSKIGVHVKTGAGRGGYVKNISVTNVTM 331
Query: 353 KTMKYVFWMTGDYGS-HPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGI 411
++ ++G+ S HPD G+DP A P V GI + N++ + L G+ PF I
Sbjct: 332 DSVLTAIALSGNSSSEHPDEGYDPLAYPVVRGIYVNKVWGRNISHAGSLRGLEAAPFEDI 391
Query: 412 CISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACE 447
C+SN+T+++ E + +W+C+N++G + VTP C
Sbjct: 392 CLSNITLEVDEASQGSKWDCSNVKGASLGVTPTPCR 427
>gi|302814173|ref|XP_002988771.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
gi|300143592|gb|EFJ10282.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
Length = 445
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/396 (51%), Positives = 276/396 (69%), Gaps = 1/396 (0%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +T+FG VGDG+T NT AF A+ L +A GGAQL VP G+WLTGSF L SH
Sbjct: 32 RPHSVSITEFGAVGDGQTVNTVAFQNAVFYLQSFAHKGGAQLYVPAGRWLTGSFTLISHL 91
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL++ +++LASQD +WPL+ PLPSYGRGRD PG R SL++G +L DVV+TGGN TI
Sbjct: 92 TLFLDTGSVILASQDPHDWPLIDPLPSYGRGRDLPGRRHRSLVYGKDLEDVVITGGNGTI 151
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW +R + N TR +L+E + S N+ +SN++L++SPSW +HPVY SNV+I+G+
Sbjct: 152 DGQGSVWWHWFRNQSLNYTRGHLVEFINSKNIVVSNISLLNSPSWTIHPVYCSNVVIRGV 211
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
T+ AP +SPNTDG+ PDSCT IED I SG D V+VKSGWDEYGI+VG+P+ ++IRR
Sbjct: 212 TVVAPSESPNTDGVQPDSCTGVCIEDCAITSGGDAVSVKSGWDEYGIRVGLPSAKVVIRR 271
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ +P SAAIA GSEMSGGIK+V ED+ N++ GV +KT GRG YVK I V +TM
Sbjct: 272 ITAQAPASAAIAFGSEMSGGIKNVVVEDVRVFNSKIGVHVKTGAGRGGYVKNISVTNVTM 331
Query: 353 KTMKYVFWMTGDYGS-HPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGI 411
++ ++G+ S HPD G+DP A P V GI + N++ + L G+ PF I
Sbjct: 332 DSVLTAIALSGNSSSEHPDEGYDPLAYPVVRGIYVNKVWGRNISHAGSLRGLEAAPFEDI 391
Query: 412 CISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACE 447
C+SN+T+++ + + +W+C+N++G + VTP C
Sbjct: 392 CLSNITLEVDDASQGSKWDCSNVKGASLGVTPTPCR 427
>gi|108711940|gb|ABF99735.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|218194041|gb|EEC76468.1| hypothetical protein OsI_14200 [Oryza sativa Indica Group]
gi|222626115|gb|EEE60247.1| hypothetical protein OsJ_13254 [Oryza sativa Japonica Group]
Length = 460
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/405 (50%), Positives = 275/405 (67%), Gaps = 7/405 (1%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +T+FG VGDG T NTKAF AI L+ +A GGAQL VP G+WLTGSF+L SH
Sbjct: 23 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFSLISHL 82
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL + KDA ++ S D S+WP++ PLPSYGRGR+ PG R SLIFGTNLTDV++TG N TI
Sbjct: 83 TLSLDKDAEIIGSPDSSDWPVIDPLPSYGRGRELPGKRHQSLIFGTNLTDVIITGANGTI 142
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW + N TRP+L+E+M+S +V ISNLT +SP WN+HPVY S VL+Q +
Sbjct: 143 DGQGAIWWDWFHSNTLNYTRPHLVELMYSTDVVISNLTFKNSPFWNIHPVYCSQVLVQHV 202
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TI AP++SPNTDGI+PDS TN I+ Y+ +GDD + +KSGWDEYGI P+ ++ I
Sbjct: 203 TILAPLNSPNTDGIDPDSSTNVCIDHCYVRNGDDVIVIKSGWDEYGISFARPSTNISISN 262
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ + A IA GSEMSGGI +VRAE + +N+ G+RIKTA GRG YVK +Y+ ++M
Sbjct: 263 ITGETRGGAGIAFGSEMSGGISEVRAEGLRIVNSMHGIRIKTAPGRGGYVKNVYISDVSM 322
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+ +TG++G HPD +D ALP ++ I ++V NV + L+GI D F+ IC
Sbjct: 323 DNVSMAIRITGNFGEHPDDKYDRNALPMISNITIENVVGVNVGVAGILEGIEGDNFSSIC 382
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTDC 457
+SNV++ + WNC+ I+G ++ V P++CE L TDC
Sbjct: 383 LSNVSLSVQSMHP---WNCSLIEGYSNSVIPESCEQL----RTDC 420
>gi|223948047|gb|ACN28107.1| unknown [Zea mays]
gi|414873755|tpg|DAA52312.1| TPA: polygalacturonase isoform 1 [Zea mays]
gi|414873756|tpg|DAA52313.1| TPA: polygalacturonase isoform 2 [Zea mays]
Length = 477
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 198/408 (48%), Positives = 274/408 (67%), Gaps = 5/408 (1%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +T+FG VGDG T NTKAF AI L+ +A GGAQL VP G+WLTGSF+L SH
Sbjct: 39 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFHLISHL 98
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL + KDA+++ S D S WP++ PLPSYGRGRD PG R SLIFG NLTDV++TG N +I
Sbjct: 99 TLSLDKDAIIIGSPDSSHWPVIDPLPSYGRGRDLPGKRHQSLIFGLNLTDVIITGANGSI 158
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW + N TRP+L+E+M+S NV ISNLT +SP WN+HPVY S VL++ +
Sbjct: 159 DGQGAIWWGWFHNHTLNYTRPHLVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVRHV 218
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TI AP++SPNTDG+ PDS TN I Y+ +G D + +KSGWDEYGI P+ ++ I
Sbjct: 219 TILAPLNSPNTDGVTPDSSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISD 278
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ + + IA GSEMSGGI +VRA + +N+ G+RIKTA GRG YV+ +Y+ ++M
Sbjct: 279 ITGETRGGSGIAFGSEMSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSM 338
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+ +TG+YG HPD +D ALP ++ I +D+V N+ + L+GI+ D F+ IC
Sbjct: 339 DNVSMAIRITGNYGEHPDDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNIC 398
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPK--KEPTDCF 458
+SNV++ + WNC+ I+G ++ V P++CE L ++ + C+
Sbjct: 399 LSNVSLSVQSAHP---WNCSLIEGYSNSVIPESCEQLRSNCRQTSICY 443
>gi|224032157|gb|ACN35154.1| unknown [Zea mays]
Length = 430
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 196/395 (49%), Positives = 268/395 (67%), Gaps = 3/395 (0%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +T+FG VGDG T NTKAF AI L+ +A GGAQL VP G+WLTGSF+L SH
Sbjct: 39 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFHLISHL 98
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL + KDA+++ S D S WP++ PLPSYGRGRD PG R SLIFG NLTDV++TG N +I
Sbjct: 99 TLSLDKDAIIIGSPDSSHWPVIDPLPSYGRGRDLPGKRHQSLIFGLNLTDVIITGANGSI 158
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW + N TRP+L+E+M+S NV ISNLT +SP WN+HPVY S VL++ +
Sbjct: 159 DGQGAIWWGWFHNHTLNYTRPHLVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVRHV 218
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TI AP++SPNTDG+ PDS TN I Y+ +G D + +KSGWDEYGI P+ ++ I
Sbjct: 219 TILAPLNSPNTDGVTPDSSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISD 278
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ + + IA GSEMSGGI +VRA + +N+ G+RIKTA GRG YV+ +Y+ ++M
Sbjct: 279 ITGETRGGSGIAFGSEMSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSM 338
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+ +TG+YG HPD +D ALP ++ I +D+V N+ + L+GI+ D F+ IC
Sbjct: 339 DNVSMAIRITGNYGEHPDDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNIC 398
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACE 447
+SNV++ + WNC+ I+G ++ V P++CE
Sbjct: 399 LSNVSLSVQSAHP---WNCSLIEGYSNSVIPESCE 430
>gi|326521404|dbj|BAJ96905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/415 (50%), Positives = 281/415 (67%), Gaps = 7/415 (1%)
Query: 43 YTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWL 102
Y + + R HS +T+FG VGDG T NTKAF AI L+ +A GGAQL VP G+WL
Sbjct: 29 YCADMASTVYRPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWL 88
Query: 103 TGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTD 162
TG FNL SH TL + KDA+++ S S+WP++ PLPSYGRGR+ PGGR SLIFG+NLTD
Sbjct: 89 TGGFNLISHLTLSLDKDAVIIGSPHSSDWPVIDPLPSYGRGRELPGGRHQSLIFGSNLTD 148
Query: 163 VVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPV 222
V++TG N TI+GQG WW + N TRP+L+E+M+S +V ISNLT +SP WN+HPV
Sbjct: 149 VIITGANGTIDGQGAYWWDWFHNHTLNYTRPHLVELMYSTSVVISNLTFKNSPFWNIHPV 208
Query: 223 YSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVG 282
Y S V+++ +TI AP+DSPNTDGINPDS TN I Y+ +GDD + +KSGWDEYGI
Sbjct: 209 YCSQVIVEHVTILAPLDSPNTDGINPDSSTNVCISHCYVRNGDDVIVIKSGWDEYGISFA 268
Query: 283 MPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYV 342
+ ++ I + + A IA+GSEMSGGI +VRAE + +N+ G+RIKTA GRG YV
Sbjct: 269 QSSSNISISNITGETGGGAGIAIGSEMSGGISEVRAEGLRIVNSLHGIRIKTAPGRGGYV 328
Query: 343 KEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDG 402
+ +Y+ ++M + +TG+YG HPD +D ALP ++ I ++V +V + L+G
Sbjct: 329 RNVYIADVSMHNVSMAIRITGNYGEHPDSKYDKNALPIISNITIENVVGIDVGVAGILEG 388
Query: 403 IRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTDC 457
I D F+ ICISNV+ L+ +P+ WNC+ IQG ++ VTP++CE L TDC
Sbjct: 389 IEGDNFSSICISNVS--LSVRPR-YPWNCSRIQGYSNSVTPESCEQL----KTDC 436
>gi|326496208|dbj|BAJ94566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/415 (49%), Positives = 279/415 (67%), Gaps = 7/415 (1%)
Query: 43 YTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWL 102
Y + + R HS +T+FG VGDG T NTKAF AI L+ +A GGAQL VP G+WL
Sbjct: 29 YCADMASTVYRPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWL 88
Query: 103 TGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTD 162
TG FNL SH TL + KDA+++ S S+WP++ PLPSYGRGR+ PGGR SLIFG+NLTD
Sbjct: 89 TGGFNLISHLTLSLDKDAVIIGSPHSSDWPVIDPLPSYGRGRELPGGRHQSLIFGSNLTD 148
Query: 163 VVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPV 222
V++TG N TI+GQG WW + N TRP+L+E+M+S +V ISNLT +SP WN+HPV
Sbjct: 149 VIITGANGTIDGQGAYWWDWFHNHTLNYTRPHLVELMYSTSVVISNLTFKNSPFWNIHPV 208
Query: 223 YSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVG 282
Y S V+++ +TI AP+DSPNTDGINPDS TN I Y+ +GDD + +KSGWDEYGI
Sbjct: 209 YCSQVIVEHVTILAPLDSPNTDGINPDSSTNVCISHCYVRNGDDVIVIKSGWDEYGISFA 268
Query: 283 MPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYV 342
+ ++ I + + A IA+GSEMSGGI +VRAE + +N+ G+RIKTA GRG YV
Sbjct: 269 QSSSNISISNITGETGGGAGIAIGSEMSGGISEVRAEGLRIVNSLHGIRIKTAPGRGGYV 328
Query: 343 KEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDG 402
+ +Y+ ++M + +TG+YG HPD +D ALP ++ I ++V +V + L+G
Sbjct: 329 RNVYIADVSMHNVSMAIRITGNYGEHPDSKYDKNALPIISNITIENVVGIDVGVAGILEG 388
Query: 403 IRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTDC 457
I D F+ ICISNV++ + + WNC+ IQG ++ VTP++CE L TDC
Sbjct: 389 IEGDNFSSICISNVSLSVRSR---YPWNCSRIQGYSNSVTPESCEQL----KTDC 436
>gi|6899921|emb|CAB71871.1| putative protein [Arabidopsis thaliana]
Length = 470
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/411 (47%), Positives = 280/411 (68%), Gaps = 6/411 (1%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +T+FG VGDG T NTKAF A+ L+ ++ GGA+L VP G+WLTGSF+L SH
Sbjct: 39 RPHSVSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISHL 98
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL++ K A +L S ++ WP++ PLPSYGRGR+ PG R SLI+G NLTDVV+TG N TI
Sbjct: 99 TLWLDKGATILGSTAKN-WPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGENGTI 157
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW +R + N TRP+L+E+M S + ISNLT ++SP WN+HPVY +V+++ L
Sbjct: 158 DGQGTVWWDWFRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNL 217
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TI AP++SPNTDG++PDS TN IED YIV+GDD V++KSGWDEYGI P+ + I R
Sbjct: 218 TILAPLESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINR 277
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
L + S+ IA+GSEMSGG+ ++ +D+ N+ +G+RIKT+ GRG YV+ +++ + +
Sbjct: 278 LTGQTTSSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSAGRGGYVRNVHILNVKL 337
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+K TG YG HPD +DPKALP + I + ++ D + + L+GI D F IC
Sbjct: 338 DNVKKAIRFTGKYGEHPDEKYDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDVFKNIC 397
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQ-ACELLPK----KEPTDCF 458
NVT+++ + K+ W C+N++G + V+P+ C+ L + + +DCF
Sbjct: 398 FLNVTLRVKKNSKKSPWECSNVRGYSQWVSPEITCDSLKESIFPEHGSDCF 448
>gi|302767254|ref|XP_002967047.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
gi|300165038|gb|EFJ31646.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
Length = 478
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/414 (48%), Positives = 271/414 (65%), Gaps = 7/414 (1%)
Query: 48 QALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFN 107
++L R HS +TDFG VGDG+ NT AF AI L +A GGAQL VP G+WLTGSFN
Sbjct: 53 RSLPKRPHSVSITDFGAVGDGRIVNTLAFQNAIFYLKSFADKGGAQLYVPRGRWLTGSFN 112
Query: 108 LTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG 167
LTSH TL++ + A++L SQD EWP++P LPSYGRGR+ PGGR SLI G N+ DVV+TG
Sbjct: 113 LTSHLTLFLEEGAVILGSQDLLEWPVIPALPSYGRGRELPGGRHISLIHGKNMVDVVITG 172
Query: 168 GNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNV 227
N TI+GQG WW + K + TR +L+E++ S ++ ISN+T +SP W +HPVY S+V
Sbjct: 173 ANGTIDGQGSVWWDWFHNKTLDFTRGHLVELIDSRHITISNVTFKNSPFWTIHPVYCSDV 232
Query: 228 LIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQH 287
LIQ +TI AP +PN DGI+PDS +N I D YI +GDD +++KSGWDE+GI GMP+ +
Sbjct: 233 LIQDVTILAPPYAPNIDGIDPDSSSNVCIRDCYISTGDDLISIKSGWDEHGINYGMPSTN 292
Query: 288 LIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYV 347
+ I + SP SA IA GSEMSGGI DV + + N++SG+RIKT GRG Y+ I +
Sbjct: 293 VCIHNVSGQSPTSAGIAFGSEMSGGISDVFIKSVRVANSRSGIRIKTGAGRGGYITNISI 352
Query: 348 RRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDP 407
+ ++ + F T YG HPD G+DP+ALP + GI+ RD+V + + + G+ P
Sbjct: 353 SDLQLENVSVAFDFTALYGGHPDDGYDPRALPVIRGISIRDVVGHEIGWAGCMAGLEEAP 412
Query: 408 FTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTD---CF 458
F +C +NV++ + WNC+N G + RV P C L +K+ D CF
Sbjct: 413 FRDLCFANVSLSVGAG----AWNCSNTYGFSERVVPSPCLELDRKQQQDGGFCF 462
>gi|297816204|ref|XP_002875985.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297321823|gb|EFH52244.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 193/411 (46%), Positives = 274/411 (66%), Gaps = 5/411 (1%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +T+FG VGDG T NTKAF A+ + ++ GGA+L VP G+WLTGSF+L SH
Sbjct: 39 RPHSVSITEFGAVGDGVTLNTKAFQNALFYPNSFSDKGGAKLFVPAGQWLTGSFDLISHL 98
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL++ A +L S WP++ PLPSYGRGR+ PG R SLI+G NLTDVV+TG N TI
Sbjct: 99 TLWLDSGATILGSTSSENWPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGENGTI 158
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW +R + N TRP+L+E+M S + ISNLT ++SP WN+HPVY +V+++ L
Sbjct: 159 DGQGSVWWDWFRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNL 218
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TI AP++SPNTDG++PDS TN IED YIV+ DD V++K+GWDEYGI P+ + I R
Sbjct: 219 TILAPLESPNTDGVDPDSSTNVCIEDCYIVTRDDLVSIKTGWDEYGISYARPSSKIKINR 278
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
L + S+ IA+GSEMSGG+ ++ +D+ N+ +G+RIKT+ GRG YV+ +++ + +
Sbjct: 279 LTGQTTSSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSPGRGGYVRNVHILNVKL 338
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+K TG YG HPD FDPKALP + I + ++ D + + L+GI D F IC
Sbjct: 339 DNVKKAIRFTGKYGEHPDKNFDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDEFKNIC 398
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQ-ACELLPK----KEPTDCF 458
NVT+++ + K+ W C+N++G + V+P C+ L + + +DCF
Sbjct: 399 FLNVTLRVKKNSKKSPWECSNVRGYSQWVSPGITCDSLKESIFPEHRSDCF 449
>gi|302755072|ref|XP_002960960.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
gi|300171899|gb|EFJ38499.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
Length = 393
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/394 (49%), Positives = 261/394 (66%), Gaps = 4/394 (1%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +TDFG VGDG+ NT AF AI L +A GGAQL VP G+WLTGSFNLTSH
Sbjct: 1 RPHSVSITDFGAVGDGRIVNTLAFQNAIFYLKSFADKGGAQLYVPRGRWLTGSFNLTSHL 60
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL++ + A++L SQD EWP++P LPSYGRGR+ PGGR SLI G N+ DVV+TG N TI
Sbjct: 61 TLFLEEGAVILGSQDLLEWPVIPALPSYGRGRELPGGRHISLIHGKNMVDVVITGANGTI 120
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW + K + TR +L+E++ S ++ ISN+T +SP W +HPVY S+VLIQ +
Sbjct: 121 DGQGSVWWDWFHNKTLDFTRGHLVELIDSRHITISNVTFKNSPFWTIHPVYCSDVLIQDV 180
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TI AP +PN DGI+PDS +N I D YI +GDD +++KSGWDE+GI GMP+ ++ I
Sbjct: 181 TILAPPYAPNIDGIDPDSSSNVCIRDCYISTGDDLISIKSGWDEHGINYGMPSTNVCIHN 240
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ SP SA IA GSEMSGGI DV + + N++SG+RIKT GRG Y+ I + + +
Sbjct: 241 VSGQSPTSAGIAFGSEMSGGISDVFIKSVRVANSRSGIRIKTGAGRGGYITNISISDLQL 300
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+ + F T YG HPD G+DP+ALP + GI+ RD+V + + + G+ PF +C
Sbjct: 301 ENVSVAFDFTALYGGHPDDGYDPRALPVIRGISIRDVVGHEIGWAGCMAGLEEAPFRDLC 360
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQAC 446
+NV++ + WNC+N G + RV P C
Sbjct: 361 FANVSLSVGAG----AWNCSNTYGFSERVVPSPC 390
>gi|115471367|ref|NP_001059282.1| Os07g0245200 [Oryza sativa Japonica Group]
gi|34393209|dbj|BAC82923.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113610818|dbj|BAF21196.1| Os07g0245200 [Oryza sativa Japonica Group]
Length = 446
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/398 (50%), Positives = 269/398 (67%), Gaps = 4/398 (1%)
Query: 70 TSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDES 129
TS+ N +++ + GGA+L VP G+WLTGSFNL SH T+ + DA+++ SQD S
Sbjct: 26 TSSAMYCNDLTASVHRPHNKGGAELFVPAGRWLTGSFNLISHLTVSLDADAVIIGSQDSS 85
Query: 130 EWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFN 189
+WP++ PLPSYGRGR+ PG R SLIFG+NLTDV++TG N TI+GQGE WW + N
Sbjct: 86 DWPVIDPLPSYGRGRELPGKRHQSLIFGSNLTDVIITGANGTIDGQGELWWNWFHNHTLN 145
Query: 190 VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPD 249
TRP L+E+M+SD V ISNLT +++P WN+HPVY S VL+Q LTI API SPNTDGI+PD
Sbjct: 146 YTRPPLLELMYSDRVVISNLTFMNAPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPD 205
Query: 250 SCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEM 309
S +N IED YI +GDD V +KSGWDEYGI P+ ++ IR + + +SA IA GSEM
Sbjct: 206 SSSNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGIAFGSEM 265
Query: 310 SGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHP 369
SGGI DVRAE + IN+ G+RIKTA GRG YVK IY+ ++M + +TG+YG HP
Sbjct: 266 SGGISDVRAEGLRFINSVHGIRIKTAPGRGGYVKNIYIADVSMDNVSIAIRITGNYGEHP 325
Query: 370 DPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQW 429
D +D ALP ++ I +++V N+ + L GI+ D F+ IC+SNV+ L+ K + W
Sbjct: 326 DDNYDKNALPVISNITIKNVVGVNIGTAGMLLGIQGDIFSNICLSNVS--LSSKSAD-PW 382
Query: 430 NCTNIQGITSRVTPQACELL-PKKEPTDCFFPDDKLPI 466
NC+ I+G ++ V P+ CE L P P + + P+
Sbjct: 383 NCSLIEGFSNSVAPEICEQLRPSPGPGQVCYDGNSYPV 420
>gi|356524183|ref|XP_003530711.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 474
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/409 (48%), Positives = 264/409 (64%), Gaps = 1/409 (0%)
Query: 49 ALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNL 108
+L R +TDFGGVGDG+T NTKAF A+ + GG L VPPG +LT SFNL
Sbjct: 65 SLRYRSDRISVTDFGGVGDGRTLNTKAFRAAVYRIQHLRRRGGTVLYVPPGVYLTESFNL 124
Query: 109 TSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGG 168
TSH TLY+ A++ A+Q+ WPL+ PLPSYGRGR+ PGGR+ S I G L+DVV+TG
Sbjct: 125 TSHMTLYLAAGAVIKATQELGNWPLIAPLPSYGRGRELPGGRYMSFIHGDGLSDVVITGE 184
Query: 169 NATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
N TI+GQG+ WW +R++ TRP L+E + S ++ ISN+ +SP WN+HPVY SNV+
Sbjct: 185 NGTIDGQGDVWWNMWRQRTLQFTRPNLVEFVNSQDIIISNVIFKNSPFWNIHPVYCSNVV 244
Query: 229 IQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHL 288
++ +TI AP DSPNTDGI+PDS +N IED+YI +GDD VAVKSGWDEYGI G P+ +
Sbjct: 245 VRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSYGI 304
Query: 289 IIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVR 348
IRRL SP A IA+GSE SGG+++V AE I N G+ IKT GRG +K I V
Sbjct: 305 TIRRLTGSSP-FAGIAIGSETSGGVENVLAEHINLFNMGVGIHIKTNSGRGGLIKNITVA 363
Query: 349 RMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPF 408
+ ++ + + GD G HPD F+P ALP V GI +++ V Q+ + G+RN PF
Sbjct: 364 HVYVENARQGIKIAGDVGGHPDEKFNPNALPVVKGITIKNVWGVRVNQAGLIHGLRNSPF 423
Query: 409 TGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTDC 457
T +C+SN+ P+ W C+++ G +V+P C L +EP C
Sbjct: 424 TDVCLSNINFHGMRGPRSPSWKCSDVFGFAHQVSPWPCSQLSSQEPGSC 472
>gi|302758838|ref|XP_002962842.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
gi|300169703|gb|EFJ36305.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
Length = 439
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/413 (48%), Positives = 274/413 (66%), Gaps = 5/413 (1%)
Query: 50 LNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAA--DGGAQLIVPPGKWLTGSFN 107
+ R HSA + DFG +GDG T NT AF A+ LS A GGA L VP G+WLTGSFN
Sbjct: 22 IGARPHSASIVDFGAIGDGVTLNTLAFQNAMFYLSSITATDKGGAMLYVPEGRWLTGSFN 81
Query: 108 LTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG 167
LTSHFTLY+ + A++L SQD S+WP++ PLPSYGRGR+ PGGR SL+ G NL DVV+TG
Sbjct: 82 LTSHFTLYLERGAVILGSQDPSQWPIIDPLPSYGRGRELPGGRHISLVHGENLEDVVITG 141
Query: 168 GNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNV 227
N TI+GQG WW + N TR +L+E + S N+ ISN+TL++SP W +HPVY +NV
Sbjct: 142 ENGTIDGQGAKWWRWSKLGLLNHTRGHLVEFVSSTNIIISNVTLVNSPFWTLHPVYCTNV 201
Query: 228 LIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQH 287
LIQG+TI AP DSPNTDGI+PDS +N I+D YI +GDD +A+KSGWDEYGI G P+ +
Sbjct: 202 LIQGVTILAPQDSPNTDGIDPDSSSNVCIQDCYISNGDDMIAIKSGWDEYGIAYGQPSSN 261
Query: 288 LIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYV 347
+ IRR+ + AAIA+GSE SGGI++V ED+ A++T+SGV I+T VGRGAY++ + +
Sbjct: 262 IHIRRVTGQTKRGAAIAIGSETSGGIENVLVEDLVAVSTKSGVSIRTGVGRGAYIRNVVL 321
Query: 348 RRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDP 407
+T+ ++ ++G HPD G++ A P V + R + + + + ++ GI P
Sbjct: 322 SSITLLDIQTAITISGFSSEHPDNGYNATAFPVVEKVTVRGVTGNTLDRPGRILGIPEVP 381
Query: 408 FTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQAC-ELLPKKEPTDCFF 459
F IC+ + I L W CT+++G +S VTP+ C EL P C F
Sbjct: 382 FRDICLED--IALDASTGLTAWKCTDVEGYSSSVTPKICKELSENNSPDACPF 432
>gi|302815490|ref|XP_002989426.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
gi|300142820|gb|EFJ09517.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
Length = 439
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/410 (48%), Positives = 273/410 (66%), Gaps = 4/410 (0%)
Query: 50 LNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAA--DGGAQLIVPPGKWLTGSFN 107
+ R HSA + DFG +GDG T NT AF A+ LS A GGA L VP G+WLTGSFN
Sbjct: 22 IGARPHSASIVDFGAIGDGVTLNTLAFQNAMFYLSSITATDKGGAMLYVPEGRWLTGSFN 81
Query: 108 LTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG 167
LTSHFTLY+ + A++L SQD S+WP++ PLPSYGRGR+ PGGR SL+ G NL DVV+TG
Sbjct: 82 LTSHFTLYLERGAVILGSQDPSQWPIIDPLPSYGRGRELPGGRHISLVHGENLEDVVITG 141
Query: 168 GNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNV 227
N TI+GQG WW + N TR +L+E + S N+ ISN+TL++SP W +HPVY +NV
Sbjct: 142 ENGTIDGQGAKWWRWSKLGLLNHTRGHLVEFVSSTNIIISNVTLVNSPFWTLHPVYCTNV 201
Query: 228 LIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQH 287
LIQG+TI AP DSPNTDGI+PDS +N I+D YI +GDD +A+KSGWDEYGI G P+ +
Sbjct: 202 LIQGVTILAPQDSPNTDGIDPDSSSNVCIQDCYISNGDDMIAIKSGWDEYGIAYGQPSSN 261
Query: 288 LIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYV 347
+ IRR+ + AAIA+GSE SGGI++V ED+ A++T+SG+ I+T VGRGAY++ + +
Sbjct: 262 IHIRRVTGQTKRGAAIAIGSETSGGIENVLVEDLVAVSTKSGISIRTGVGRGAYIRNVVL 321
Query: 348 RRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDP 407
+T+ ++ ++G HPD GF+ A P V + R + + + + ++ GI P
Sbjct: 322 SSITLLDIQTAITISGFSSEHPDNGFNATAFPVVEKVTVRGVTGNTLDRPGRILGIPEVP 381
Query: 408 FTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTDC 457
F IC+ ++ + T W CT+++G +S VTP+ C L + D
Sbjct: 382 FRDICLEDIALDATTGLT--AWKCTDVEGYSSSVTPKICSQLSENNTPDA 429
>gi|296083315|emb|CBI22951.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/397 (48%), Positives = 262/397 (65%), Gaps = 1/397 (0%)
Query: 50 LNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLT 109
L+ R HS + +FG VGDGKT NT AF AI L +A GGAQL VPPGKWLTGSFNLT
Sbjct: 32 LDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLT 91
Query: 110 SHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGN 169
SH TL++ + A++L SQD S W ++ PLPSYGRG + PGGR+ SLI G L DVV+TG N
Sbjct: 92 SHLTLFLERGAVILGSQDPSHWEVIEPLPSYGRGIELPGGRYRSLINGYMLRDVVITGDN 151
Query: 170 ATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
TINGQG WW + N +RP+L+E + S NV +SNLT +++P++N+HPVY SNV +
Sbjct: 152 GTINGQGSVWWDWFTSHSLNYSRPHLVEFLASTNVVVSNLTFLNAPAYNIHPVYCSNVRV 211
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
Q +++ AP +SP T GI PDS +T IED I G D +A+KSGWDEYGI G PT ++
Sbjct: 212 QNISVYAPPESPYTVGIVPDSSDSTCIEDCSIAMGHDAIALKSGWDEYGIAYGRPTTNVH 271
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRR 349
IRR+ S +++A GSEMSGGI +V E + N+ SG+ +T GRG Y++EI +
Sbjct: 272 IRRVNLQSSSGSSLAFGSEMSGGISNVCVEQVHLYNSFSGIEFRTTKGRGGYIQEIIISD 331
Query: 350 MTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFT 409
+ M+ + F TG GSHPD FDP ALP + I ++++ N+T + GI+ PFT
Sbjct: 332 VAMENIHTAFSATGQIGSHPDDHFDPNALPVLDHITLQNVIGTNITIAGSFTGIQESPFT 391
Query: 410 GICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQAC 446
IC+SN+++ T P + W C+N+ G + V P+ C
Sbjct: 392 SICLSNISLS-TTPPASISWVCSNVSGFSQWVFPEPC 427
>gi|225431820|ref|XP_002273305.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 457
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/397 (48%), Positives = 262/397 (65%), Gaps = 1/397 (0%)
Query: 50 LNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLT 109
L+ R HS + +FG VGDGKT NT AF AI L +A GGAQL VPPGKWLTGSFNLT
Sbjct: 34 LDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLT 93
Query: 110 SHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGN 169
SH TL++ + A++L SQD S W ++ PLPSYGRG + PGGR+ SLI G L DVV+TG N
Sbjct: 94 SHLTLFLERGAVILGSQDPSHWEVIEPLPSYGRGIELPGGRYRSLINGYMLRDVVITGDN 153
Query: 170 ATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
TINGQG WW + N +RP+L+E + S NV +SNLT +++P++N+HPVY SNV +
Sbjct: 154 GTINGQGSVWWDWFTSHSLNYSRPHLVEFLASTNVVVSNLTFLNAPAYNIHPVYCSNVRV 213
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
Q +++ AP +SP T GI PDS +T IED I G D +A+KSGWDEYGI G PT ++
Sbjct: 214 QNISVYAPPESPYTVGIVPDSSDSTCIEDCSIAMGHDAIALKSGWDEYGIAYGRPTTNVH 273
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRR 349
IRR+ S +++A GSEMSGGI +V E + N+ SG+ +T GRG Y++EI +
Sbjct: 274 IRRVNLQSSSGSSLAFGSEMSGGISNVCVEQVHLYNSFSGIEFRTTKGRGGYIQEIIISD 333
Query: 350 MTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFT 409
+ M+ + F TG GSHPD FDP ALP + I ++++ N+T + GI+ PFT
Sbjct: 334 VAMENIHTAFSATGQIGSHPDDHFDPNALPVLDHITLQNVIGTNITIAGSFTGIQESPFT 393
Query: 410 GICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQAC 446
IC+SN+++ T P + W C+N+ G + V P+ C
Sbjct: 394 SICLSNISLS-TTPPASISWVCSNVSGFSQWVFPEPC 429
>gi|356567484|ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 442
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/408 (48%), Positives = 264/408 (64%), Gaps = 1/408 (0%)
Query: 50 LNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLT 109
L R +TDFGGVGDG+T NTKAF A+ + GG L VPPG +LT SFNLT
Sbjct: 34 LRYRSDRISITDFGGVGDGRTLNTKAFRAAVYRIQHLRRRGGTVLYVPPGVYLTESFNLT 93
Query: 110 SHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGN 169
SH TLY+ A++ A+Q+ WPL+ PLPSYGRGR+ PGGR+ S I G L+DVV+TG N
Sbjct: 94 SHMTLYLAAGAVIKATQELGNWPLIVPLPSYGRGRELPGGRYMSFIHGDGLSDVVITGEN 153
Query: 170 ATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
TI+GQG+ WW +R++ TRP L+E + S ++ ISN+ +SP WN+HPVY SNV++
Sbjct: 154 GTIDGQGDVWWNMWRQRTLQFTRPNLVEFVNSQDIIISNVIFKNSPFWNIHPVYCSNVVV 213
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
+ +TI AP DSPNTDGI+PDS +N IED+YI +GDD VAVKSGWDEYGI G P+ +
Sbjct: 214 RYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSYGIT 273
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRR 349
IRR+ SP A IA+GSE SGG+++V AE I N G+ IKT GRG +K I V
Sbjct: 274 IRRVTGSSP-FAGIAIGSETSGGVENVLAEHINLFNMGVGIHIKTNSGRGGLIKNITVAH 332
Query: 350 MTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFT 409
+ ++ + + GD G HPD F+P ALP V GI +++ V Q+ + G+RN PFT
Sbjct: 333 VYVENARQGIKIAGDVGGHPDEKFNPNALPVVKGITIKNVWGVKVNQAGLIHGLRNSPFT 392
Query: 410 GICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTDC 457
+C+S++ E P+ W C+++ G +V+P C L +EP C
Sbjct: 393 DVCLSDINFHGMEGPRSPSWKCSDVFGFAHQVSPWPCSQLSSQEPGSC 440
>gi|297743929|emb|CBI36899.3| unnamed protein product [Vitis vinifera]
Length = 477
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/405 (47%), Positives = 265/405 (65%), Gaps = 1/405 (0%)
Query: 48 QALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFN 107
++L R HS + +FG VGDGKTSNT AF AI L +A GGAQL VPPG+WLTGSFN
Sbjct: 53 KSLEPRPHSVSILEFGAVGDGKTSNTIAFENAIFYLKSFADKGGAQLYVPPGRWLTGSFN 112
Query: 108 LTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG 167
LTSH TL++ + A +L SQD + W +L PLPSYGRG + PGGR+ SLI G NL+DVV+TG
Sbjct: 113 LTSHLTLFLERGATILGSQDFTHWEILDPLPSYGRGIELPGGRYRSLINGPNLSDVVITG 172
Query: 168 GNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNV 227
N TI+GQG WW + N +RP+++E + S+++ ISNLT ++SP+WN+HPVY SNV
Sbjct: 173 NNGTIDGQGSVWWENFSSHSLNYSRPHIVEFISSNDIIISNLTFLNSPAWNIHPVYCSNV 232
Query: 228 LIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQH 287
+Q +T AP +SP T G+ PDS IED+ I G D + +KSGWDEYGI G PT++
Sbjct: 233 WVQNITAYAPPESPRTSGVVPDSSEYICIEDSNISMGYDAIVLKSGWDEYGIAYGKPTRN 292
Query: 288 LIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYV 347
+ IRR+ S + +A GSEMSGGI D+ E I ++ +G+++KT GRG Y+K I +
Sbjct: 293 VHIRRVWLQSSSGSGLAFGSEMSGGISDILVEHIHLQDSSTGIKLKTTKGRGGYIKGILI 352
Query: 348 RRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDP 407
+ M+ + TG SHPD +DP ALP V GI ++DMV NV+ + GI P
Sbjct: 353 SDVEMENVGLTIGATGQCRSHPDDKYDPGALPVVDGITFKDMVGTNVSIAGNFSGIYESP 412
Query: 408 FTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKK 452
FT IC+ N+++ +T + W C+N+ G + V+P+ C L K
Sbjct: 413 FTSICLFNISLSITSNSSK-PWLCSNVFGSSECVSPEPCPNLQTK 456
>gi|225437457|ref|XP_002269037.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 542
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/405 (47%), Positives = 265/405 (65%), Gaps = 1/405 (0%)
Query: 48 QALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFN 107
++L R HS + +FG VGDGKTSNT AF AI L +A GGAQL VPPG+WLTGSFN
Sbjct: 118 KSLEPRPHSVSILEFGAVGDGKTSNTIAFENAIFYLKSFADKGGAQLYVPPGRWLTGSFN 177
Query: 108 LTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG 167
LTSH TL++ + A +L SQD + W +L PLPSYGRG + PGGR+ SLI G NL+DVV+TG
Sbjct: 178 LTSHLTLFLERGATILGSQDFTHWEILDPLPSYGRGIELPGGRYRSLINGPNLSDVVITG 237
Query: 168 GNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNV 227
N TI+GQG WW + N +RP+++E + S+++ ISNLT ++SP+WN+HPVY SNV
Sbjct: 238 NNGTIDGQGSVWWENFSSHSLNYSRPHIVEFISSNDIIISNLTFLNSPAWNIHPVYCSNV 297
Query: 228 LIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQH 287
+Q +T AP +SP T G+ PDS IED+ I G D + +KSGWDEYGI G PT++
Sbjct: 298 WVQNITAYAPPESPRTSGVVPDSSEYICIEDSNISMGYDAIVLKSGWDEYGIAYGKPTRN 357
Query: 288 LIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYV 347
+ IRR+ S + +A GSEMSGGI D+ E I ++ +G+++KT GRG Y+K I +
Sbjct: 358 VHIRRVWLQSSSGSGLAFGSEMSGGISDILVEHIHLQDSSTGIKLKTTKGRGGYIKGILI 417
Query: 348 RRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDP 407
+ M+ + TG SHPD +DP ALP V GI ++DMV NV+ + GI P
Sbjct: 418 SDVEMENVGLTIGATGQCRSHPDDKYDPGALPVVDGITFKDMVGTNVSIAGNFSGIYESP 477
Query: 408 FTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKK 452
FT IC+ N+++ +T + W C+N+ G + V+P+ C L K
Sbjct: 478 FTSICLFNISLSITSNSSK-PWLCSNVFGSSECVSPEPCPNLQTK 521
>gi|356547950|ref|XP_003542367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 491
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/395 (49%), Positives = 268/395 (67%), Gaps = 3/395 (0%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
LTDFGGVGDG T NT+AF A+S +SK+ GGAQL VPPG+WLT FNLTSH TL++ +
Sbjct: 75 LTDFGGVGDGVTLNTEAFKRAVSAVSKFGKKGGAQLNVPPGRWLTAPFNLTSHMTLFLAE 134
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
DA++L DE WPL+PPLPSYG GR+ PG R+ SLI G +L DVV+TG N TINGQG+
Sbjct: 135 DAVILGIDDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQHLKDVVITGHNGTINGQGQT 194
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW KYR+K+ N TR L+++MFS ++ I+N+TL DSP W +HP N+ I+G+TI AP+
Sbjct: 195 WWKKYRQKRLNHTRGPLVQIMFSSDIVITNITLRDSPFWTLHPYDCKNITIKGVTILAPV 254
Query: 239 -DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
+PNTDGI+PDSC + IED YI GDD +A+KSGWD+YGI G P+ +++IR L+ S
Sbjct: 255 FGAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIMIRNLVVRS 314
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
SA I++GSEMSGG+ +V E+I +++ GVRIKTA GRGAYV++I R +T + ++
Sbjct: 315 MVSAGISIGSEMSGGVSNVMVENILIWDSRRGVRIKTARGRGAYVRQITYRNITFENVRV 374
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
M DY HPD G+DP ALP + I++ + V ++ G P + +++
Sbjct: 375 GIVMKTDYNEHPDDGYDPMALPILRDISFTTVHGQGVRVPVRIHGSEEIPVRNVTFQDMS 434
Query: 418 IKLTEKPKELQWNCTNIQG-ITSRVTPQACELLPK 451
+ LT K K + + C +QG + + P CE L +
Sbjct: 435 VGLTYKKKHI-FQCAFVQGRVIGTIYPAPCENLDR 468
>gi|297742322|emb|CBI34471.3| unnamed protein product [Vitis vinifera]
Length = 447
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/400 (49%), Positives = 260/400 (65%), Gaps = 2/400 (0%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFGGVGDGKT NTKAF AI + GG L +PPG +LT SFNLTSH TLY+ K
Sbjct: 45 IKDFGGVGDGKTLNTKAFRAAIYRIEHLRRRGGTLLYIPPGVYLTESFNLTSHMTLYLSK 104
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
DA++ A+QD WPL+ PLPSYGRGR+ PGGR+ S I + DV++TG N TI+GQGE
Sbjct: 105 DAVIRATQDTGSWPLIAPLPSYGRGRELPGGRYMSFIHADGVHDVIITGENGTIDGQGEV 164
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW +R++ TRP LIE++ S N+ ISN+ DSP WN+HPVY NV++Q +TI AP
Sbjct: 165 WWNMWRQRTLQFTRPNLIELINSRNIIISNVIFRDSPFWNIHPVYCRNVVVQFVTILAPH 224
Query: 239 DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISP 298
DSPNTDGI+PDS +N IED+YI +GDD VAVKSGWDEYGI G P+ + IRR+ SP
Sbjct: 225 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSGITIRRITGSSP 284
Query: 299 DSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYV 358
A IA+GSE SGG+++V AE I N G+ +KT +GRG ++ I V + M+ +
Sbjct: 285 -FAGIAVGSETSGGVQNVFAEHINLYNMGVGIHLKTNIGRGGVIRNITVSNVYMEKARTG 343
Query: 359 FWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
+ GD G HPD F+P ALP V G+ RD+ +V Q + G++N PFTGIC+S + +
Sbjct: 344 IKIAGDVGDHPDDNFNPNALPVVKGVVIRDVWGLDVLQPGSIIGLKNSPFTGICLSKINL 403
Query: 419 KLTEKPKELQWNCTNIQGITSRVTPQAC-ELLPKKEPTDC 457
KP W C+++ G V+P C EL + C
Sbjct: 404 HGKIKPGTAPWKCSDVSGAAVGVSPWPCSELTSPGQTGSC 443
>gi|357150536|ref|XP_003575492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 451
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/394 (47%), Positives = 259/394 (65%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +T+FG VGDG T NT F AI L +A GGAQL VP G+WLTGSFNLTSH
Sbjct: 33 RPHSVTITEFGAVGDGVTVNTVPFQNAIFYLRSFADKGGAQLYVPKGRWLTGSFNLTSHL 92
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL++ KDA+++ +++ +EWP++ PLPSYG+G D PG R SLI G N+TDVV+TG N I
Sbjct: 93 TLFLEKDAVIVGTKEVTEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVITGNNGVI 152
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW +R + N +RP+L+E S+ + ISNLT ++SP+W +HPVY SNV + +
Sbjct: 153 DGQGLTWWNWFRSNKLNYSRPHLVEFEDSEEIVISNLTFLNSPAWAIHPVYCSNVTVNNI 212
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TI+ +D+P +DGI PDSC+N IED+ I D +++KSGWD YGI G PT + I R
Sbjct: 213 TIQTSLDAPLSDGIVPDSCSNVCIEDSRISVSHDAISLKSGWDNYGITFGRPTSDIHICR 272
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ + AA+ALGSEMSGGI DV + + + GV +TA GRG Y++++ + + M
Sbjct: 273 VDLQASLGAALALGSEMSGGISDVHVDHLHIHASSKGVSFRTAPGRGGYIRDVIISDVQM 332
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+ + TGD+ SHPD FDP ALP ++GI ++MV N++ + L GI DPFT IC
Sbjct: 333 EDVHVAIEFTGDWSSHPDEHFDPSALPVISGITLKNMVGTNISVAGVLSGIDGDPFTDIC 392
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQAC 446
+SNV + + W+C+NI G + V P+ C
Sbjct: 393 LSNVNFSIPDSAHSTSWSCSNISGYSELVFPEPC 426
>gi|356565754|ref|XP_003551102.1| PREDICTED: probable polygalacturonase-like isoform 1 [Glycine max]
Length = 492
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/395 (49%), Positives = 268/395 (67%), Gaps = 3/395 (0%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
LTDFGGVGDG T NT+AF A+S +SK+ GGAQL VPPG+WLT FNLTSH TL++ +
Sbjct: 76 LTDFGGVGDGVTLNTEAFERAVSAVSKFGKKGGAQLNVPPGRWLTAPFNLTSHMTLFLAE 135
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
DA++L DE WPL+PPLPSYG GR+ PG R+ SLI G +L DVV+TG N TINGQG+
Sbjct: 136 DAVILGIDDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQHLKDVVITGHNGTINGQGQS 195
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW KYR+K+ N TR L+++MFS ++ I+N+TL DSP W +HP N+ I+G+TI AP+
Sbjct: 196 WWKKYRQKRLNHTRGPLVQIMFSSDIVITNITLRDSPFWTIHPYDCKNITIKGVTILAPV 255
Query: 239 -DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
+PNTDGI+PDSC + IED YI GDD +AVKSGWD+YGI G P+ +++IR L+ S
Sbjct: 256 FGAPNTDGIDPDSCEDMLIEDCYISVGDDAIAVKSGWDQYGIDYGRPSMNIMIRNLVVRS 315
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
SA I++GSEMSGG+ +V E++ +++ GVRIKTA GRGAYV++I R +T + ++
Sbjct: 316 MVSAGISIGSEMSGGVSNVTVENLLIWDSRRGVRIKTAPGRGAYVRQITYRNITFENVRV 375
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
M DY HPD G+DP ALP + I++ + V ++ G P + +++
Sbjct: 376 GIVMKTDYNEHPDDGYDPLALPILRDISFTTVHGQGVRVPVRIHGSEEIPVRNVTFKDMS 435
Query: 418 IKLTEKPKELQWNCTNIQG-ITSRVTPQACELLPK 451
+ LT K K + + C +QG + + P CE L +
Sbjct: 436 VGLTYKKKHI-FQCAFVQGRVIGTIYPAPCENLDR 469
>gi|15236625|ref|NP_194113.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|4454051|emb|CAA23048.1| putative polygalacturonase [Arabidopsis thaliana]
gi|7269231|emb|CAB81300.1| putative polygalacturonase [Arabidopsis thaliana]
gi|17065242|gb|AAL32775.1| putative polygalacturonase [Arabidopsis thaliana]
gi|22136230|gb|AAM91193.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332659410|gb|AEE84810.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 444
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/400 (50%), Positives = 260/400 (65%), Gaps = 2/400 (0%)
Query: 50 LNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLT 109
L R +TDFGGVGDG+T NTKAF AI + GG L +PPG +LT SFNLT
Sbjct: 34 LRYRYDKISITDFGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVYLTESFNLT 93
Query: 110 SHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGN 169
SH TLY+ K A++ A QD WPL+ PLPSYGRGR+ PGGR+ S I G L DVV+TG N
Sbjct: 94 SHMTLYLAKGAVIRAVQDTWNWPLIDPLPSYGRGRELPGGRYMSFIHGDGLRDVVITGQN 153
Query: 170 ATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
TI+GQGE WW +R + TRP LIE S + ISN+ +SP WN+HPVY SNV+I
Sbjct: 154 GTIDGQGEVWWNMWRSRTLKYTRPNLIEFKDSKEIIISNVIFQNSPFWNIHPVYCSNVVI 213
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
+TI AP DSPNTDGI+PDS N IED+YI +GDD VA+KSGWD+YGI G P+ ++
Sbjct: 214 HHVTILAPQDSPNTDGIDPDSSYNVCIEDSYISTGDDLVAIKSGWDQYGIAYGRPSSNIT 273
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRR 349
IRR+ SP A IA+GSE SGGIK++ AE IT N GV IKT +GRG Y+K I +
Sbjct: 274 IRRITGSSP-FAGIAIGSETSGGIKNIIAEHITLSNMGVGVNIKTNIGRGGYIKNIKISD 332
Query: 350 MTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFT 409
+ + T KY + GD G HPD ++P ALP V GI+ +++ NV + + G++ PFT
Sbjct: 333 VYVDTAKYGIKIAGDTGDHPDENYNPNALPVVKGIHIKNVWGVNVRNAGSIQGLKGSPFT 392
Query: 410 GICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL 449
GIC+S + + + + W C+++ G + +V+P C L
Sbjct: 393 GICLSEINLHGSLNSYK-TWKCSDVSGTSLKVSPWPCSEL 431
>gi|168053514|ref|XP_001779181.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669440|gb|EDQ56027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/394 (47%), Positives = 263/394 (66%), Gaps = 2/394 (0%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +TDFG VGDGKT NT AF AI L YAA+GGAQL +P G WLTGS L SH
Sbjct: 1 RPHSVSITDFGAVGDGKTLNTHAFENAIFYLRSYAANGGAQLYIPVGLWLTGSITLISHL 60
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL++ A +L S+D ++P++P LPSYGRGR+ PG RFSSLI G L DV++TG NATI
Sbjct: 61 TLFLENGATILGSEDFFDYPVIPGLPSYGRGRELPGPRFSSLINGNGLEDVIITGDNATI 120
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW +RKK N TR +++E++ S N+ ISNLT +SP W +HPVY NV+++ L
Sbjct: 121 DGQGAVWWSAFRKKTLNYTRGHMLELIESKNILISNLTFKNSPFWTIHPVYCKNVVVKSL 180
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TI P D+PNTDGI+PDS + IED YI GDD +++KSGWD++G MP++H+ ++R
Sbjct: 181 TILNPFDAPNTDGIDPDSSQHVCIEDCYISVGDDAISIKSGWDQFGTSFAMPSKHIKVQR 240
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
++ S SA I+ GSEMSGGI DV+ + + + GVRIKTAVGRG YV+ I V+ + +
Sbjct: 241 ILAFSRSSAGISFGSEMSGGISDVKVDGMVVTGARWGVRIKTAVGRGGYVRGISVKNIVL 300
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+++ + G+YG HPD ++ A P + I +++V +N+ Q+ G++ PF I
Sbjct: 301 HSIRTAIAVMGNYGEHPDENWNRTAYPLIEDIRMKNIVGENINQAGLFLGLQESPFRDIH 360
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQAC 446
++N+ +++ + WNC+++ G V PQ C
Sbjct: 361 LANIALQVNTTKQ--IWNCSDVAGSYIFVFPQPC 392
>gi|219887583|gb|ACL54166.1| unknown [Zea mays]
Length = 463
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/286 (65%), Positives = 230/286 (80%), Gaps = 4/286 (1%)
Query: 47 FQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGA--QLIVPPGKWLTG 104
+ A CR H+A + DFGGVGDG TSNT AF +A+ +LS+Y+ +GG L VP GKWLTG
Sbjct: 42 YLAPACRAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKWLTG 101
Query: 105 SFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVV 164
FNLTSHFTLY+H+DA++L SQD EWP++ PLPSYGRGRD+ GGRF+SLI G+NLTDVV
Sbjct: 102 PFNLTSHFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDKVGGRFASLIGGSNLTDVV 161
Query: 165 VTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYS 224
+TG N TI+GQG WW K+ K Q TR YLIE+M SD + ISNLTL++SP+WN+HPVYS
Sbjct: 162 ITGSNGTIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYS 221
Query: 225 SNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMP 284
SN+++QG+TI AP +SPNTDGINPDSC++ RIED YIVSGDDCVA+KSGWDEYGI GMP
Sbjct: 222 SNIVVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMP 281
Query: 285 TQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGV 330
+QH++IRRL C+SP SA IALGSEMSGG VRA A + ++GV
Sbjct: 282 SQHIVIRRLTCVSPTSAVIALGSEMSGG--GVRAAPDDAHHHEAGV 325
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 34/35 (97%)
Query: 309 MSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVK 343
MSGGI+DVRAEDITAINT+S VRIKTAVGRGAYV+
Sbjct: 1 MSGGIQDVRAEDITAINTESAVRIKTAVGRGAYVR 35
>gi|297799608|ref|XP_002867688.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313524|gb|EFH43947.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 444
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/400 (49%), Positives = 259/400 (64%), Gaps = 2/400 (0%)
Query: 50 LNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLT 109
L R +TD+GGVGDG+T NTKAF AI + GG L +PPG +LT SFNLT
Sbjct: 34 LRYRYDKISITDYGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVYLTESFNLT 93
Query: 110 SHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGN 169
SH T Y+ K A++ A QD WPL+ PLPSYGRGR+ PGGR+ S I G L DVV+TG N
Sbjct: 94 SHMTFYLAKGAVIRAVQDTWNWPLIDPLPSYGRGRELPGGRYMSFIHGDGLRDVVITGQN 153
Query: 170 ATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
TI+GQGE WW +R + TRP LIE S + ISN+ +SP WN+HPVY SNV+I
Sbjct: 154 GTIDGQGEVWWNMWRSRTLKYTRPNLIEFKDSKEIIISNVIFQNSPFWNIHPVYCSNVVI 213
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
+TI AP DSPNTDGI+PDS N IED+YI +GDD VA+KSGWDEYGI G P+ ++
Sbjct: 214 HHVTILAPQDSPNTDGIDPDSSYNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSNIT 273
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRR 349
IRR+ SP A IA+GSE SGGIK++ AE IT N GV IKT +GRG Y+K I +
Sbjct: 274 IRRITGSSP-FAGIAIGSETSGGIKNIVAEHITLSNMGVGVNIKTNIGRGGYIKNIKISD 332
Query: 350 MTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFT 409
+ + T KY + GD G HPD ++P ALP V GI+ +++ NV + + G++ PFT
Sbjct: 333 VYIDTAKYGIKIAGDTGDHPDENYNPNALPIVKGIHIKNVWGVNVRNAGSIQGLKGSPFT 392
Query: 410 GICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL 449
GIC+S + + + + W C+++ G + +V+P C L
Sbjct: 393 GICLSEINLHGSLNSYK-TWKCSDVIGTSLKVSPWPCSEL 431
>gi|356565756|ref|XP_003551103.1| PREDICTED: probable polygalacturonase-like isoform 2 [Glycine max]
Length = 491
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/395 (49%), Positives = 268/395 (67%), Gaps = 4/395 (1%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
LTDFGGVGDG T NT+AF A+S +SK+ GGAQL VPPG+WLT FNLTSH TL++ +
Sbjct: 76 LTDFGGVGDGVTLNTEAFERAVSAVSKFGKKGGAQLNVPPGRWLTAPFNLTSHMTLFLAE 135
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
DA++L DE WPL+PPLPSYG GR+ PG R+ SLI G +L DVV+TG N TINGQG+
Sbjct: 136 DAVILGIDDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQHLKDVVITGHNGTINGQGQS 195
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW KYR+K+ N TR L+++MFS ++ I+N+TL DSP W +HP N+ I+G+TI AP+
Sbjct: 196 WWKKYRQKRLNHTRGPLVQIMFSSDIVITNITLRDSPFWTIHPYDCKNITIKGVTILAPV 255
Query: 239 -DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
+PNTDGI+PDSC + IED YI GDD +AVKSGWD+YGI G P+ +++IR L+ +
Sbjct: 256 FGAPNTDGIDPDSCEDMLIEDCYISVGDDAIAVKSGWDQYGIDYGRPSMNIMIRNLVKST 315
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
P A I++GSEMSGG+ +V E++ +++ GVRIKTA GRGAYV++I R +T + ++
Sbjct: 316 P-FAGISIGSEMSGGVSNVTVENLLIWDSRRGVRIKTAPGRGAYVRQITYRNITFENVRV 374
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
M DY HPD G+DP ALP + I++ + V ++ G P + +++
Sbjct: 375 GIVMKTDYNEHPDDGYDPLALPILRDISFTTVHGQGVRVPVRIHGSEEIPVRNVTFKDMS 434
Query: 418 IKLTEKPKELQWNCTNIQG-ITSRVTPQACELLPK 451
+ LT K K + + C +QG + + P CE L +
Sbjct: 435 VGLTYKKKHI-FQCAFVQGRVIGTIYPAPCENLDR 468
>gi|186701223|gb|ACC91250.1| glycoside hydrolase family 28 protein [Arabidopsis halleri]
Length = 444
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/400 (49%), Positives = 260/400 (65%), Gaps = 2/400 (0%)
Query: 50 LNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLT 109
L R +T++GGVGDG+T NTKAF AI + GG L +PPG +LT SFNLT
Sbjct: 34 LRYRYDKISITEYGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVYLTESFNLT 93
Query: 110 SHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGN 169
SH TLY+ K A++ A QD WPL+ PLPSYGRGR+ PGGR+ S I G L DVV+TG N
Sbjct: 94 SHMTLYLAKGAVIRAVQDTWNWPLIDPLPSYGRGRELPGGRYMSFIHGDGLRDVVITGQN 153
Query: 170 ATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
TI+GQGE WW + + TRP LIE S + ISN+ +SP WN+HPVY SNV+I
Sbjct: 154 GTIDGQGEVWWNMWHSRTLKYTRPNLIEFKDSKEIIISNVIFQNSPFWNIHPVYCSNVVI 213
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
+TI AP DSPNTDGI+PDS N IED+YI +GDD VA+KSGWDEYGI G P+ ++
Sbjct: 214 HHVTILAPQDSPNTDGIDPDSSYNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSNIT 273
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRR 349
IRR+ SP A IA+GSE SGGIK++ AE IT N GV IKT +GRG Y+K I +
Sbjct: 274 IRRITGSSP-FAGIAIGSETSGGIKNIVAEHITLSNMGVGVNIKTNIGRGGYIKNIKISD 332
Query: 350 MTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFT 409
+ + T KY +TGD G HPD ++P ALP V GI+ +++ NV + + G++ PFT
Sbjct: 333 VYIDTAKYGIKITGDTGDHPDENYNPNALPIVKGIHIKNVWGVNVRNAGSIQGLKGSPFT 392
Query: 410 GICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL 449
GIC+S + + + + W C+++ G + +V+P C L
Sbjct: 393 GICLSEINLHGSLNSYK-TWKCSDVIGTSLKVSPWPCSEL 431
>gi|224107034|ref|XP_002314352.1| predicted protein [Populus trichocarpa]
gi|222863392|gb|EEF00523.1| predicted protein [Populus trichocarpa]
Length = 435
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 255/401 (63%), Gaps = 2/401 (0%)
Query: 49 ALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNL 108
L R HS + +FG VGDGKT NT AF AI L + GGAQL VPPGKWLTGSF+L
Sbjct: 31 GLKPRPHSVSILEFGAVGDGKTLNTLAFQNAIFYLKSFTDKGGAQLYVPPGKWLTGSFSL 90
Query: 109 TSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGG 168
TSH TL++ K A++L SQD S W L+ PLPSYGRG + PG R+ SLI G LTDVVVTG
Sbjct: 91 TSHLTLFLEKGAVILGSQDPSHWDLVDPLPSYGRGIELPGKRYRSLINGDMLTDVVVTGD 150
Query: 169 NATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
N TI+GQG WW + N +RP+L+E SD V +SNLT +++P++N+HPVY SNVL
Sbjct: 151 NGTIDGQGSVWWDWFESHSLNYSRPHLVEFTSSDLVVVSNLTFLNAPAYNIHPVYCSNVL 210
Query: 229 IQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHL 288
+Q +++ AP +SP T GI PDS N IED+ I G D +++KSGWDEYGI PTQ +
Sbjct: 211 VQNISVSAPGESPYTIGIVPDSSNNVCIEDSLIKVGYDAISLKSGWDEYGIAYDRPTQDV 270
Query: 289 IIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVR 348
IRR+ S ++IA GSEMSGGI +V E + N+ SG+ +T GRG Y+K I +
Sbjct: 271 HIRRVYLQSSSGSSIAFGSEMSGGISNVYVEQVYLYNSFSGIEFRTTKGRGGYIKRIIIS 330
Query: 349 RMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPF 408
+ +K + F GD GSHPD FDP A+P + I +++ N+T + G+ PF
Sbjct: 331 NVELKNINMAFGAIGDCGSHPDDSFDPNAIPILDQITLQNVTGSNITMAGNFTGLAESPF 390
Query: 409 TGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL 449
T IC+ NV+ LT W C+N+ G + V+P+ C L
Sbjct: 391 TSICLFNVS--LTIPATSTSWTCSNVIGFSEFVSPEPCPEL 429
>gi|356529330|ref|XP_003533248.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 452
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/413 (47%), Positives = 263/413 (63%), Gaps = 4/413 (0%)
Query: 50 LNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLT 109
L+ R HS + +FG VGDGKT NT AF AI L +A GGAQL VPPGKWLTGSFNLT
Sbjct: 30 LDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLT 89
Query: 110 SHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGN 169
SH TL++ K A+L+ +QD S W ++ PLPSYGRG + PGGR+ SLI G L DVVVTG N
Sbjct: 90 SHLTLFLEKGAVLIGTQDPSHWDVVEPLPSYGRGLEVPGGRYQSLINGYMLHDVVVTGNN 149
Query: 170 ATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
TI+G G WW Y N +RP+L+E + SD V +SNLT +++P++++HPVY S+V I
Sbjct: 150 GTIDGMGMVWWDWYSTHSLNHSRPHLVEFVASDYVVVSNLTFLNAPAYSIHPVYCSHVHI 209
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
Q ++I P +SP T GI PDS N IED + G D +++KSGWDEYGI G PT+++
Sbjct: 210 QNVSISTPPESPYTVGIVPDSSDNVCIEDCIVAMGFDAISLKSGWDEYGIAYGRPTENVH 269
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRR 349
IRR+ + +A+A GS+MSGGI +V E N+ SG+ +T GRG Y+KEI +
Sbjct: 270 IRRVQLHAFSGSALAFGSDMSGGISNVLVEHAHLFNSNSGIEFRTTKGRGGYMKEIVMSD 329
Query: 350 MTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFT 409
+ M+ + TG+ GSHPD FDP ALP + I +D++ N+T + L GI PFT
Sbjct: 330 IQMENVHTAIAATGNCGSHPDDKFDPNALPHLDHITLKDVIGTNITIAGNLAGIDESPFT 389
Query: 410 GICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPK---KEPTDCFF 459
IC+SN+T+ T + W C+N+ G + V P+ C L + CF+
Sbjct: 390 NICLSNITLS-TNSVSPITWACSNVSGFSDSVLPEPCPELGNTSYDSSSSCFY 441
>gi|356519942|ref|XP_003528627.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 449
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/398 (47%), Positives = 259/398 (65%), Gaps = 1/398 (0%)
Query: 49 ALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNL 108
AL R H+ + +FG VGDGKT NT AF AI L +A GGAQL VPPG WLT SFNL
Sbjct: 31 ALKPRPHTVSILEFGAVGDGKTLNTMAFQNAIFYLKSFADKGGAQLYVPPGTWLTQSFNL 90
Query: 109 TSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGG 168
TSH TL++ K A++L SQD W ++ PLPSYGRG + PGGR+ SLI G L DVV+TG
Sbjct: 91 TSHLTLFLEKGAVILGSQDPFHWEVVDPLPSYGRGVEVPGGRYQSLINGNMLHDVVITGN 150
Query: 169 NATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
N I+G G WW + N +RP+LIE++ SD+V +SNLT +++P++++HPVY SNV
Sbjct: 151 NGNIDGMGFAWWELFSSHSLNYSRPHLIELVASDHVVVSNLTFLNAPAYSIHPVYCSNVH 210
Query: 229 IQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHL 288
I ++I AP +SPNT GI PDS + IED I +G D +++KSGWDEYGI G PT+++
Sbjct: 211 IHNVSISAPPESPNTVGIVPDSSDHVCIEDCVIATGYDAISLKSGWDEYGIAYGRPTENV 270
Query: 289 IIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVR 348
IRR+ + + IA GS+MSGGI ++ E++ N++SG+ +T GRG Y+KEI +
Sbjct: 271 HIRRVHLQASSGSTIAFGSDMSGGISNILVENVHLYNSKSGIEFRTMRGRGGYMKEIIIS 330
Query: 349 RMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPF 408
+ M+ + TG GSHPD FDP ALP + I +DM+ N+T + G++ PF
Sbjct: 331 DIEMENIYTAIAATGYCGSHPDDKFDPNALPLLDHIILQDMIGTNITIAGSFAGLQESPF 390
Query: 409 TGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQAC 446
T IC+SN+T+ T + W C+N+ G + V P+ C
Sbjct: 391 TNICLSNITLS-TNSVSSIPWECSNVSGFSDYVLPKPC 427
>gi|356558153|ref|XP_003547372.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 579
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/413 (46%), Positives = 264/413 (63%), Gaps = 4/413 (0%)
Query: 50 LNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLT 109
L+ R HS + +FG VGDGKT NT AF AI L +A GGAQL VPPGKWLTGSFNLT
Sbjct: 157 LDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLT 216
Query: 110 SHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGN 169
SH TL++ K A+++ +QD S W ++ PLPSYGRG + PGGR+ SLI G L DVVVTG N
Sbjct: 217 SHLTLFLEKGAVIIGTQDPSHWDVVEPLPSYGRGLEVPGGRYQSLINGYMLHDVVVTGNN 276
Query: 170 ATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
TI+G G WW Y N +RP+L+E++ SD V +SNLT +++P++++HPVY S+V I
Sbjct: 277 GTIDGMGMVWWDWYSTHSLNHSRPHLVEIVASDYVVVSNLTFLNAPAYSIHPVYCSHVHI 336
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
Q ++I P +SP T GI PDS N IED + G D +++KSGWDEYGI G PT+++
Sbjct: 337 QNVSISTPPESPYTVGIVPDSSDNVCIEDCIVAMGFDAISLKSGWDEYGIAYGRPTENVH 396
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRR 349
IRR+ + +A+A GS+MSGGI +V E N++SG+ +T GRG Y+KEI +
Sbjct: 397 IRRVHLHAFSGSALAFGSDMSGGISNVLVEHAHLFNSKSGIEFRTTKGRGGYMKEIVMSD 456
Query: 350 MTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFT 409
+ M+ + TG+ GSHPD FDP ALP + I +D+ N++ + + GI PFT
Sbjct: 457 IQMENVHTAIAATGNCGSHPDDKFDPNALPHLDHITLKDVTGTNISIAGNIAGIEESPFT 516
Query: 410 GICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL---PKKEPTDCFF 459
IC+SN+T+ T + W C+N+ G + V P+ C L + CF+
Sbjct: 517 NICLSNITLS-TNSVSPITWECSNVSGFSDSVLPEPCPELGNPSYDSSSSCFY 568
>gi|218186147|gb|EEC68574.1| hypothetical protein OsI_36908 [Oryza sativa Indica Group]
Length = 449
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 180/401 (44%), Positives = 256/401 (63%)
Query: 49 ALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNL 108
A R HS +T+FG VGDGKT NT F A+ +A GGAQL VP G+WLTGSFNL
Sbjct: 27 APGSRPHSVTITEFGAVGDGKTLNTLPFQNAVFYARSFADKGGAQLYVPKGRWLTGSFNL 86
Query: 109 TSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGG 168
TSH TL++ ++A+++ ++D S+WP++ PLPSYG+G D PG R SLI G NL+DVV+TG
Sbjct: 87 TSHLTLFLEEEAVIIGTKDPSQWPIVEPLPSYGQGLDLPGPRHRSLINGYNLSDVVITGN 146
Query: 169 NATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
N I+GQG WW + N +RP+++E + S+ V ISNLT ++SP+W++HPVY SNV
Sbjct: 147 NGVIDGQGSVWWDWLHSHELNHSRPHIVEFLHSEEVVISNLTFLNSPAWSIHPVYCSNVK 206
Query: 229 IQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHL 288
+ +TI+ +D+P TDGI PDSC+N IED+ I G D +++KSGWD YGI G PT +
Sbjct: 207 VHNVTIKTSLDAPLTDGIVPDSCSNVCIEDSSISVGHDAISLKSGWDNYGISFGRPTSDI 266
Query: 289 IIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVR 348
I R+ + AA+A+GSEMSGGI D+ + I ++ G+ +T GRG Y+ E+ V
Sbjct: 267 HISRVDLQASSGAALAIGSEMSGGISDIHVDHIRIGSSSKGISFRTTPGRGGYIAEVVVA 326
Query: 349 RMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPF 408
+ M ++ TG++ SHPD FDP LP + I ++M N++ + L GI DPF
Sbjct: 327 DVVMDSVHLAIEFTGNWSSHPDDHFDPSFLPVIDQITLKNMEGTNISVAGVLSGIEGDPF 386
Query: 409 TGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL 449
+ IC+SN+ + + W C+N+ G + V P+ C L
Sbjct: 387 SAICLSNLNFSIADSAPSSAWTCSNVHGYSELVFPKPCSEL 427
>gi|302143795|emb|CBI22656.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/242 (75%), Positives = 211/242 (87%), Gaps = 1/242 (0%)
Query: 50 LNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLT 109
+NCRKHSA+LT+FGG+GDGKTSNTKAF TAI +L ++A DGGA+LIVPPGKWLTGSFNLT
Sbjct: 42 INCRKHSALLTEFGGIGDGKTSNTKAFKTAIDHLKQFATDGGAELIVPPGKWLTGSFNLT 101
Query: 110 SHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGN 169
SHFTLYIHKDA++L SQ+ES++P +PPLPSYG+GRD GGRFSSLIFGTNLTDVV+ GGN
Sbjct: 102 SHFTLYIHKDAVILGSQEESDYPHIPPLPSYGKGRDG-GGRFSSLIFGTNLTDVVIIGGN 160
Query: 170 ATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
TINGQG WW K+++K+ TRPYLIE+MFSD VQISNLTLIDSPSWNVHPVY S+V+I
Sbjct: 161 GTINGQGRVWWDKFKQKKLVDTRPYLIEIMFSDQVQISNLTLIDSPSWNVHPVYCSDVII 220
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
QG+TI AP+D PNTDGINPDSC N +IED YIVSGDDC+AVKSGWD+YGIK G I
Sbjct: 221 QGMTILAPVDVPNTDGINPDSCANVKIEDCYIVSGDDCIAVKSGWDQYGIKYGAWEGEAI 280
Query: 290 IR 291
R
Sbjct: 281 GR 282
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/248 (70%), Positives = 207/248 (83%), Gaps = 1/248 (0%)
Query: 46 EFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGS 105
E++A+NCRKHSAVLTDFG GDGKT NTKAF +AI+NLS+ A DGGAQLIVPPGKWLTGS
Sbjct: 290 EYRAINCRKHSAVLTDFGAKGDGKTMNTKAFKSAIANLSQVAGDGGAQLIVPPGKWLTGS 349
Query: 106 FNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVV 165
FNLTSHFTL++HKDA++L +QDE+ +PL+ LPSYG GRD GGR +SLIFGTNLTDVV+
Sbjct: 350 FNLTSHFTLFVHKDAVILGAQDEAAYPLIEILPSYGAGRDG-GGRHASLIFGTNLTDVVI 408
Query: 166 TGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSS 225
TGGN TI+GQG+ WW K+R + TRPYLIE+M+SD VQISNL LIDSPSWNVHP YSS
Sbjct: 409 TGGNGTIHGQGQYWWDKFRADKLKDTRPYLIEIMYSDQVQISNLILIDSPSWNVHPTYSS 468
Query: 226 NVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPT 285
NV+IQ LTI AP+ SPNTDGINPDS N IED +IVSGDDC+AVKSGWD+YGIK G
Sbjct: 469 NVIIQWLTIIAPVGSPNTDGINPDSSKNVLIEDCFIVSGDDCIAVKSGWDQYGIKCGKGR 528
Query: 286 QHLIIRRL 293
+++ +
Sbjct: 529 IYMVAENV 536
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 82/112 (73%), Gaps = 3/112 (2%)
Query: 359 FWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
F ++GD G+D + G Y MVA+NVT SA+LDGI DPFTGICISNV I
Sbjct: 503 FIVSGDDCIAVKSGWDQYGIKCGKGRIY--MVAENVTYSARLDGISGDPFTGICISNVKI 560
Query: 419 KLTEKPKELQWNCTNIQGITSRVTPQACELL-PKKEPTDCFFPDDKLPIDDV 469
LTEKPK+LQWNCTN++G++S+VTP +C+LL P K+ +C FP+DKLPI+D+
Sbjct: 561 GLTEKPKKLQWNCTNVEGVSSQVTPPSCDLLHPSKKVFNCPFPEDKLPIEDL 612
>gi|115486511|ref|NP_001068399.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|77552386|gb|ABA95183.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113645621|dbj|BAF28762.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|222616379|gb|EEE52511.1| hypothetical protein OsJ_34717 [Oryza sativa Japonica Group]
Length = 449
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/401 (44%), Positives = 256/401 (63%)
Query: 49 ALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNL 108
A R HS +T+FG VGDGKT NT F A+ +A GGAQL VP G+WLTGSFNL
Sbjct: 27 APGSRPHSVTITEFGAVGDGKTLNTLPFQNAVFYARSFADKGGAQLYVPKGRWLTGSFNL 86
Query: 109 TSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGG 168
TSH TL++ ++A+++ ++D S+WP++ PLPSYG+G D PG R SLI G NL+DVV+TG
Sbjct: 87 TSHLTLFLEEEAVIIGTKDPSQWPIVEPLPSYGQGLDLPGPRHRSLINGYNLSDVVITGN 146
Query: 169 NATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
N I+GQG WW + N +RP+++E + S+ V ISNLT ++SP+W++HPVY SNV
Sbjct: 147 NGVIDGQGSVWWDWLHSHELNHSRPHIVEFLHSEEVVISNLTFLNSPAWSIHPVYCSNVK 206
Query: 229 IQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHL 288
+ +TI+ +D+P TDGI PDSC+N IED+ I G D +++KSGWD YGI G PT +
Sbjct: 207 VHNVTIKTSLDAPLTDGIVPDSCSNVCIEDSSISVGHDAISLKSGWDNYGISFGRPTSDI 266
Query: 289 IIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVR 348
I R+ + AA+A+GSEMSGGI D+ + I ++ G+ +T GRG Y+ E+ V
Sbjct: 267 HISRVDLQASSGAALAIGSEMSGGISDIHVDHIRIGSSSKGISFRTTPGRGGYIAEVVVA 326
Query: 349 RMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPF 408
+ M ++ TG++ SHPD FDP LP + I ++M N++ + L GI DPF
Sbjct: 327 DVVMDSVHLAIEFTGNWSSHPDDHFDPSFLPVIDQITLKNMEGTNISVAGVLSGIEGDPF 386
Query: 409 TGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL 449
+ IC+SN+ + + W C+N+ G + V P+ C L
Sbjct: 387 SAICLSNLNFSIADLAPSSAWTCSNVHGYSELVFPKPCSEL 427
>gi|413916538|gb|AFW56470.1| polygalacturonase [Zea mays]
Length = 458
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/428 (44%), Positives = 268/428 (62%), Gaps = 4/428 (0%)
Query: 20 LSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTA 79
L++++ + +L AE P T R HS +T+FG VGDG T NT +F A
Sbjct: 7 LASMVAVLVLGLACAEAEP---QCTRRRPPAPPRPHSVTITEFGAVGDGVTLNTVSFQNA 63
Query: 80 ISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPS 139
+ L +A GGAQL +P G+WLTGSFNLTSH TL++ A+++ +QD S+WP++ PLPS
Sbjct: 64 VFYLRSFADKGGAQLYIPRGRWLTGSFNLTSHLTLFLESGAVIVGTQDVSQWPVVEPLPS 123
Query: 140 YGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVM 199
YGRG D PG R SLI G NL DVV+TG N TI+GQG WW +R + N +RP+L+E +
Sbjct: 124 YGRGMDLPGSRHRSLINGQNLVDVVITGNNGTIDGQGSTWWNWFRSNKLNYSRPHLVEFV 183
Query: 200 FSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDN 259
S+ + ISN+T ++SP+W++HPVY SNV++ +TI+ +D+P GI PDSC+N IED+
Sbjct: 184 DSEQIVISNITFLNSPAWSIHPVYCSNVVVHSVTIQTSLDAPLNHGIVPDSCSNMCIEDS 243
Query: 260 YIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAE 319
I D +++KSGWD+ GI G PT + I RL S AA+A GSEMSGGI D+ A+
Sbjct: 244 SISVSHDAISLKSGWDKQGIAFGRPTSDIHISRLDLQSSLGAALAFGSEMSGGISDIHAD 303
Query: 320 DITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALP 379
+ ++ GV KTA GRG Y+++ + + M+ + TGD+ SHPD FDP ALP
Sbjct: 304 RLLIHSSSRGVFFKTAPGRGGYIRDTVISDVQMEDVDVAIAFTGDWPSHPDDQFDPAALP 363
Query: 380 TVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKEL-QWNCTNIQGIT 438
V+ I ++M ++ + L GI DPFT IC+SN+ L + W+C+N+ G +
Sbjct: 364 VVSHITLKNMTGTRISVAGVLSGIAGDPFTDICLSNINFSLADSASPTSHWSCSNVSGYS 423
Query: 439 SRVTPQAC 446
V P+ C
Sbjct: 424 ELVFPEPC 431
>gi|168021522|ref|XP_001763290.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685425|gb|EDQ71820.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 449
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/406 (47%), Positives = 273/406 (67%), Gaps = 2/406 (0%)
Query: 51 NCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTS 110
N R H LTDFG VGDG + NT+ F AI+ + + A+DGGAQLIV PG+WLT FN+TS
Sbjct: 31 NLRPHVFNLTDFGAVGDGYSVNTRCFEDAIAAIKERASDGGAQLIVGPGRWLTAPFNVTS 90
Query: 111 HFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNA 170
H TL++ + A ++A QD WP+LP LPSYGRGR+ PG R+SSLI G ++ D V+TG N
Sbjct: 91 HMTLFLSRGATIVAIQDAGLWPILPALPSYGRGRELPGLRYSSLIHGQHVEDFVLTGHNG 150
Query: 171 TINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQ 230
+I+GQG WW ++++K+ TR L+E+M+S N+ IS++TL +SP W++HP +NV I
Sbjct: 151 SIDGQGGWWWEQHKQKRLRYTRGRLVELMWSTNIVISDVTLQNSPFWHLHPYDCTNVTIS 210
Query: 231 GLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLII 290
G+TI AP+D+PNTDGI+PDSC N +E+ YI GDD VAVKSGWD+YGI+ P ++ I
Sbjct: 211 GVTILAPLDAPNTDGIDPDSCKNVLVENCYISVGDDAVAVKSGWDKYGIEYNRPCVNVTI 270
Query: 291 RRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRM 350
R +I S SA I++GSEMSGG++ V ED+ ++ G+RIKT+ GRG YVK I + +
Sbjct: 271 RNVIARSQISAGISIGSEMSGGVEQVLVEDVYIWGSRRGIRIKTSPGRGGYVKNILYKNL 330
Query: 351 TMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTG 410
T+ ++ + DYG HPD FDPKALP V I++ + +V ++ G + P TG
Sbjct: 331 TLIDVRVGIVVKTDYGEHPDLDFDPKALPVVANISFDGVYGSSVRYPVRMFGSKEVPITG 390
Query: 411 ICISNVTIKLTEKPKELQWNCTNIQG-ITSRVTPQACELLPKKEPT 455
I I N+ + LT K + + + C +QG + +V P C+ L ++E +
Sbjct: 391 IDIRNMNVGLTRKKRNV-FTCDFLQGRVVGKVFPSPCKALIREEAS 435
>gi|224142779|ref|XP_002324728.1| predicted protein [Populus trichocarpa]
gi|222866162|gb|EEF03293.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/397 (48%), Positives = 264/397 (66%), Gaps = 3/397 (0%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
LTDFG VGDG T NT+AF A+S +SK A GG QL VPPGKWLT FNLTSH TL++ +
Sbjct: 79 LTDFGAVGDGVTLNTEAFERAVSAISKLARRGGGQLNVPPGKWLTAPFNLTSHMTLFLAE 138
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
DA++L QDE+ WPL+PPLPSYG GR+ PG R+ SLI G NL D+V+TG N TI+GQG+
Sbjct: 139 DAVILGIQDENYWPLMPPLPSYGYGREHPGPRYGSLIHGQNLRDIVITGHNGTIDGQGQT 198
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW KYR+K N TR L+++M+S ++ N+TL +SP W +HP NV I+ +TI API
Sbjct: 199 WWKKYRQKLLNHTRGPLVQIMWSSDIVFMNITLRNSPFWTLHPYDCKNVTIRNVTILAPI 258
Query: 239 -DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
++PNTDGI+PDSC + IED YI GDD +A+KSGWD+YGI G P+ +++IR L+ S
Sbjct: 259 FEAPNTDGIDPDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSTNILIRNLVVRS 318
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
SA I++GSEMSGG+ V E++ +++ VRIKTA GRGAYV+ I R +T ++
Sbjct: 319 MVSAGISIGSEMSGGVSSVTVENLLVWSSRRAVRIKTAPGRGAYVRNITYRNLTFDDVRV 378
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
+ DY HPD G+DPKA+PT+ I++ + V ++ G P + +++
Sbjct: 379 GIVIKTDYNEHPDEGYDPKAVPTLQDISFSGIHGQGVRVPVRIHGSEEIPVRNVTFQDMS 438
Query: 418 IKLTEKPKELQWNCTNIQG-ITSRVTPQACELLPKKE 453
+ LT K K + + C +QG + + P CE L + +
Sbjct: 439 VGLTYKKKHI-FQCAFVQGRVIGTIFPAPCENLDRYD 474
>gi|125538851|gb|EAY85246.1| hypothetical protein OsI_06620 [Oryza sativa Indica Group]
Length = 443
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/397 (48%), Positives = 254/397 (63%), Gaps = 3/397 (0%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R + + +FGGVGDG+T NT AF+ A+ + GG L+VP G WLTGSFNLTSH
Sbjct: 39 RPETVSIAEFGGVGDGRTVNTWAFHKAVYRIQHQRRRGGTTLLVPAGTWLTGSFNLTSHM 98
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL++ + A+L A+Q+ WPL PLPSYGRGR+ PG R++S I G L DVV+TG I
Sbjct: 99 TLFLARGAVLKATQETRSWPLAEPLPSYGRGRELPGARYASFIHGDGLHDVVITGDKGII 158
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG+ WW +R++ TRP L+E M S + ISN+ L +SP WN+HPVY NV+I +
Sbjct: 159 DGQGDVWWNMWRQRTLQHTRPNLLEFMHSSGIHISNIVLKNSPFWNIHPVYCDNVVITNM 218
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
I AP DSPNTDG++PDS TN IED+YI +GDD VA+KSGWDEYGI G P+ + IRR
Sbjct: 219 MIIAPHDSPNTDGVDPDSSTNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRR 278
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ SP S IA+GSE SGG+ DV ED + N+ G+ IKT +GRG +++ I V + M
Sbjct: 279 VRGSSPFS-GIAIGSEASGGVSDVLVEDCSIFNSGYGIHIKTNIGRGGFIRNITVDNVRM 337
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+++ + GD G HPD F ALPTV G++ +++ NV Q ++GIRN PFT IC
Sbjct: 338 NSVRNGLRIAGDVGDHPDEHFSQLALPTVDGVSIKNVWGVNVQQPGSIEGIRNSPFTRIC 397
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL 449
++NV KL W C ++ G V P C L
Sbjct: 398 LANV--KLFGWRNNAAWKCRDVHGAALGVQPGPCAEL 432
>gi|226507254|ref|NP_001148987.1| polygalacturonase precursor [Zea mays]
gi|195623798|gb|ACG33729.1| polygalacturonase [Zea mays]
Length = 458
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/425 (44%), Positives = 263/425 (61%), Gaps = 7/425 (1%)
Query: 23 LLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISN 82
+L LGL C + T R HS +T+FG VGDG T NT +F A+
Sbjct: 13 VLVLGL------ACAEAEPQCTRRRPPAPPRPHSVTITEFGAVGDGVTLNTVSFQNAVFY 66
Query: 83 LSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGR 142
L +A GGAQL +P G+WLTGSFNLTSH TL++ A+++ +QD S+WP++ PLPSYGR
Sbjct: 67 LRSFADKGGAQLYIPRGRWLTGSFNLTSHLTLFLESGAVIVGTQDVSQWPVVEPLPSYGR 126
Query: 143 GRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSD 202
G D PG R SLI G NL DVV+TG N TI+GQG WW +R + N +RP+L+E + S+
Sbjct: 127 GMDLPGSRHRSLINGQNLIDVVITGNNGTIDGQGSTWWNWFRSNKLNYSRPHLVEFVDSE 186
Query: 203 NVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIV 262
+ ISN+T ++SP+W++HPVY SNV++ +TI+ +D+P GI PDSC+N IED+ I
Sbjct: 187 QIVISNITFLNSPAWSIHPVYCSNVVVHSVTIQTSLDAPLNHGIVPDSCSNMCIEDSSIS 246
Query: 263 SGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDIT 322
D +++KSGWD+ GI G PT + I RL S AA+ GSEMSGGI DV A+ +
Sbjct: 247 VSHDAISLKSGWDKQGIAFGRPTSDIHISRLDLQSSLGAALTFGSEMSGGISDVHADRLL 306
Query: 323 AINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVT 382
++ GV KTA GRG Y+++ + + M+ + TGD+ SHPD FDP ALP V+
Sbjct: 307 IHSSFRGVFFKTAPGRGGYIRDTVISDVQMEDVDVAIAFTGDWPSHPDDQFDPTALPVVS 366
Query: 383 GINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKEL-QWNCTNIQGITSRV 441
I ++M ++ + L GI DPFT IC+SN+ L + W+C+N+ G + V
Sbjct: 367 HITLKNMTGTRISVAGVLSGIAGDPFTDICLSNINFSLADSASPTSHWSCSNVSGYSELV 426
Query: 442 TPQAC 446
P+ C
Sbjct: 427 FPEPC 431
>gi|242053639|ref|XP_002455965.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
gi|241927940|gb|EES01085.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
Length = 447
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/397 (47%), Positives = 259/397 (65%), Gaps = 3/397 (0%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R + FGG GDG+T NT AF A++ + + A GGA+L VPPG WLTG FNLTS
Sbjct: 41 RGARVSVASFGGAGDGRTLNTAAFARAVATIERRAVPGGAELYVPPGVWLTGPFNLTSRM 100
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL++ + A++ A+QD S WPL+ PLPSYGRGR+ PGGR+ SLI G+ L DVV+TG N TI
Sbjct: 101 TLFLARGAVVRATQDTSSWPLIEPLPSYGRGRELPGGRYISLIHGSGLQDVVITGENGTI 160
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG PWW ++K TRP+L+E+M S ++ +SN+ DSP WN+HPVY SNV+I+ +
Sbjct: 161 DGQGTPWWDMWKKGTLLYTRPHLLELMSSSHIIVSNVVFQDSPFWNIHPVYCSNVVIRNV 220
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TI AP DSPNTDGI+PDS +N IED YI +GDD +A+KSGWDEYGI G P+ + +RR
Sbjct: 221 TILAPHDSPNTDGIDPDSSSNICIEDCYISTGDDAIAIKSGWDEYGIAYGRPSSDITVRR 280
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ SP A A+GSE SGG+++V AE + ++ G+ IKT GRG +++ + V +T+
Sbjct: 281 ITGSSP-FAGFAVGSETSGGVENVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTL 339
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
++Y + GD G+HPD ++ ALP V + +++ N+ ++ + GI N F+ IC
Sbjct: 340 DNVRYGLRIVGDVGNHPDERYNRSALPIVDALTIKNVQGQNIKEAGLIKGIANSAFSRIC 399
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL 449
+SNV KLT W C + G V P C L
Sbjct: 400 LSNV--KLTGGAPVQPWKCEAVSGGALDVQPSPCTEL 434
>gi|302753776|ref|XP_002960312.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
gi|300171251|gb|EFJ37851.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
Length = 455
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/428 (44%), Positives = 262/428 (61%), Gaps = 6/428 (1%)
Query: 22 TLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAIS 81
+L LG SP + C ++ R S + DFGGV DG T NTKAF AI
Sbjct: 26 SLFLLGDCSPAIQGCNSVESRLVPGLSRARPRVFS--IADFGGVSDGITLNTKAFQKAID 83
Query: 82 NLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYG 141
++ + GGA L +P GKWLTG FNLTSH TL++ +DA +LAS+D +WP++ PLPSYG
Sbjct: 84 HIGSFGKLGGATLYIPRGKWLTGCFNLTSHMTLFLEQDATILASEDPQDWPVVDPLPSYG 143
Query: 142 RGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFS 201
RGR+ PG R++SL+ G +TDV +TG N TI+GQG WW ++R K TR L+E MFS
Sbjct: 144 RGRELPGKRYTSLLHGLRITDVAITGNNGTIDGQGLIWWNRFRSKTLQHTRGSLVEFMFS 203
Query: 202 DNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYI 261
N+ + N+TLI+SP W +HPVY+S+V+I+G+TI AP +PNTDG++PDS +N I D YI
Sbjct: 204 SNILVHNVTLINSPFWTLHPVYTSDVMIKGVTILAPHKAPNTDGVDPDSSSNVCIRDTYI 263
Query: 262 VSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDI 321
+GDD VAVKSGWDEYG+ P+ + + L S I+LGSEMSGGI +V A +
Sbjct: 264 SNGDDAVAVKSGWDEYGLAFNRPSHDVFLVNLTV--SGSHGISLGSEMSGGIYNVHAYGV 321
Query: 322 TAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTV 381
+ G+ IKT+ GRGAY++ + F TG YG HPD G++ A T+
Sbjct: 322 SISGAVQGIHIKTSAGRGAYIRNASFASFEILDTGVAFSFTGIYGDHPDAGYNASAFATI 381
Query: 382 TGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRV 441
I++RD+V V ++ G+ PF C ++V ++L K WNC+ I+G + V
Sbjct: 382 ENISFRDVVGMRVNRAGDFRGVPQSPFRHTCFTDVALELNGKSN--HWNCSYIEGYSRHV 439
Query: 442 TPQACELL 449
+P C L
Sbjct: 440 SPPPCPEL 447
>gi|356534963|ref|XP_003536020.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 456
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/399 (45%), Positives = 255/399 (63%)
Query: 48 QALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFN 107
+A++ R HS + +FG VGDGKT NT AF A+ +A GGA+L VP GKWLTGSFN
Sbjct: 31 EAVDPRPHSVSILEFGAVGDGKTLNTVAFQNAVFYAKSFADKGGAKLYVPSGKWLTGSFN 90
Query: 108 LTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG 167
LTSH TL++ + A ++ASQD + W + PLPSYGRG D P GR+ SLI+G NL+DVV+TG
Sbjct: 91 LTSHLTLFLERGATIIASQDYAHWTAMDPLPSYGRGIDVPSGRYRSLIYGQNLSDVVITG 150
Query: 168 GNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNV 227
NA I+GQG WW N +RP++IE++ SDN+ ISNLT ++SP+W++HPVY SNV
Sbjct: 151 DNAIIDGQGSVWWDLIGTHSLNYSRPHIIELVGSDNITISNLTFLNSPAWSIHPVYCSNV 210
Query: 228 LIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQH 287
IQ +T+ AP + P T GI PDS + I ++ I +G D + +KSGWD+YG+ G PT
Sbjct: 211 QIQKITVHAPTEFPYTSGIVPDSSEHVCIYNSNISTGHDAIVLKSGWDQYGVAYGKPTSK 270
Query: 288 LIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYV 347
+ IR + S A +A GSEMSGGI D+ AE + N+ G+ +KT GRG Y+K I++
Sbjct: 271 VHIRGVYLQSSSGAGLAFGSEMSGGISDIIAEQLHITNSTIGIELKTTKGRGGYMKNIFI 330
Query: 348 RRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDP 407
++ + MTG GSHPD +DP A+P V + + +++ N+ + GI + P
Sbjct: 331 SDAKLENIYLGISMTGSSGSHPDDKYDPNAVPDVGNVTFENVIGTNIAIAGNFSGIVDSP 390
Query: 408 FTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQAC 446
FT IC+ N T + + W C++I GI+ V P+ C
Sbjct: 391 FTPICLLNATFSSSSESSSPSWFCSDIMGISEEVFPEPC 429
>gi|224096000|ref|XP_002310517.1| predicted protein [Populus trichocarpa]
gi|222853420|gb|EEE90967.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/411 (47%), Positives = 276/411 (67%), Gaps = 2/411 (0%)
Query: 39 TKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPP 98
T+ S F L RK + +FGGVGDGKTSNT+ F AI L ++ GGAQL VP
Sbjct: 17 TRTSCVGFFGELPERKAVMSIREFGGVGDGKTSNTETFRKAIRYLQRFGESGGAQLNVPK 76
Query: 99 GKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGT 158
G+W+TGSFNLTS+FTL++ + A++L SQD EWP++ PLPSYGRGR+ GGR SL+ G
Sbjct: 77 GRWVTGSFNLTSNFTLFLEEGAVILGSQDPKEWPIIEPLPSYGRGRERLGGRHISLVHGD 136
Query: 159 NLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWN 218
LT+VV+TG N TI+GQG+ WW + + TR +L+E+M S+N+ I+NLT ++P W
Sbjct: 137 GLTNVVITGNNGTIDGQGKMWWELWWNRTLEHTRGHLVELMNSNNILIANLTFCNAPFWT 196
Query: 219 VHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYG 278
+HPVY SNV+++ +TI AP+ +PNTDGI+PDS TN IED YI SGDD VAVKSGWD+YG
Sbjct: 197 IHPVYCSNVVVKDMTILAPLKAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYG 256
Query: 279 IKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGR 338
IK+ P+ ++++RR+ +P + + +GSEMSGGI ++ ED+ ++ +GVRIKT GR
Sbjct: 257 IKMARPSSNIVVRRVSGTTPTCSGVGIGSEMSGGIFNITIEDLHVWDSAAGVRIKTDNGR 316
Query: 339 GAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSA 398
G Y+ I + +TM+ +K + HPD G+DPKA+P V GI+ R++++ N T++
Sbjct: 317 GGYIANITISNVTMERVKVPIRFSRGSNDHPDEGWDPKAVPVVKGISIRNVISFNSTKAP 376
Query: 399 KLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL 449
L+G+ + PF GIC+ NV+ L L W+C + G V P C L
Sbjct: 377 VLEGVEDAPFGGICMKNVS--LLGVVSSLSWHCEFVSGFADEVFPTPCPQL 425
>gi|224130360|ref|XP_002328589.1| predicted protein [Populus trichocarpa]
gi|222838571|gb|EEE76936.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/403 (46%), Positives = 255/403 (63%), Gaps = 6/403 (1%)
Query: 49 ALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNL 108
+L R HS + +FG VGDGKT NT AF AI L + GGAQL VPPGKWLTGSF+L
Sbjct: 33 SLKPRPHSVSILEFGAVGDGKTLNTLAFQNAIFYLKSFTDKGGAQLYVPPGKWLTGSFSL 92
Query: 109 TSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGG 168
TSH TL++ K A++L SQD S W L+ PLPSYGRG + PG R+ SLI G L DVVVTG
Sbjct: 93 TSHLTLFVEKGAVILGSQDPSHWDLVDPLPSYGRGIELPGKRYQSLINGDMLHDVVVTGD 152
Query: 169 NATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
N TI+GQG WW + N +RP+L+E SD V +SNLT +++P++++HPVY SNV+
Sbjct: 153 NGTIDGQGSVWWDWFESHSLNYSRPHLVEFTSSDYVVVSNLTFLNAPAYSIHPVYCSNVV 212
Query: 229 IQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHL 288
+Q +++ AP +SP T GI PDS N IED+ I G D +++KSGWDEYGI PT +
Sbjct: 213 VQNISVSAPGESPYTIGIVPDSSNNVCIEDSRIEVGYDAISLKSGWDEYGIAYDRPTTDV 272
Query: 289 IIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVR 348
IRR+ S +++A GSEMSGGI +V E + N+ SG+ +T GRG Y+K I +
Sbjct: 273 YIRRVYLQSSSGSSVAFGSEMSGGISNVHVEQVHIYNSFSGIEFRTTKGRGGYIKRIIIS 332
Query: 349 RMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPF 408
+ +K F GD GSHPD FDP A+P + I + ++ N+T + G+ PF
Sbjct: 333 DVELKNTNTAFGAIGDCGSHPDDNFDPNAIPVLDQITLQGVIGSNITMAGNFTGLAESPF 392
Query: 409 TGICISNVTIKL--TEKPKELQWNCTNIQGITSRVTPQACELL 449
T +C+ NV++ + T P W C+N+ G + V+P+ C L
Sbjct: 393 TSLCLFNVSLAIRNTLSP----WTCSNVVGFSESVSPEPCPEL 431
>gi|302823943|ref|XP_002993619.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
gi|300138547|gb|EFJ05311.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
Length = 468
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/393 (49%), Positives = 264/393 (67%), Gaps = 3/393 (0%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAA-DGGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
LTDFGG+GDG+T NT+AF A++ +S AA GGAQL VP G WLT FNLTSH TL++
Sbjct: 53 LTDFGGIGDGRTINTRAFERAVAEISSAAAKSGGAQLNVPAGVWLTAPFNLTSHMTLFLE 112
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
+DA +LA+Q E WPL+ PLPSYGRGR+ PG R+ SLI G +L D+V+TG N TI+G G
Sbjct: 113 EDATILATQSEDLWPLMQPLPSYGRGRELPGPRYGSLIHGQHLEDIVITGHNGTIDGNGR 172
Query: 178 PWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAP 237
WW K ++KQ TR LI++M+S ++IS++TL +SP W VHP NV I+G+TI AP
Sbjct: 173 KWWEKAKRKQLKHTRGRLIQLMWSRGIEISDVTLRNSPFWTVHPYDCENVTIRGVTIIAP 232
Query: 238 IDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
D+PNTDGI+PDSC N IE YI GDD VAVKSGWD+YGI G P ++ IR + +
Sbjct: 233 PDAPNTDGIDPDSCRNVLIESCYISVGDDGVAVKSGWDQYGIDYGKPCANITIRNIQVNA 292
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
P SA +++GSEMSGGI +V E++ N++ GVRIKT GRG YV +++ R +TM+T++
Sbjct: 293 PVSAGVSIGSEMSGGITNVTVENVFIWNSKRGVRIKTTPGRGGYVTQVFYRNITMETVRV 352
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
+ DYG HPD +DP ALP V I + + V A++ G + P G+ I ++
Sbjct: 353 GIVIKTDYGDHPDEFYDPTALPVVEKIFFDGIYGSEVRIPARIYGSKEVPVRGLEIRDMN 412
Query: 418 IKLTEKPKELQWNCTNIQG-ITSRVTPQACELL 449
+ +T K K + + C+ +QG + + P+ CE L
Sbjct: 413 VGVTRKKKHV-FQCSFLQGEVFGTIFPKPCEDL 444
>gi|168046254|ref|XP_001775589.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673007|gb|EDQ59536.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 483
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/397 (46%), Positives = 264/397 (66%), Gaps = 1/397 (0%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R +S + DFG VGDG T NT AF A+ +LS YA GGA+L +P G+WLTGS L SH
Sbjct: 81 RPYSFSIIDFGAVGDGTTLNTHAFERAMLSLSNYADKGGAELYIPAGRWLTGSIRLISHL 140
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL++ A +L S+D +++PL+P LPSYGRGR+ PG R+SSLI G L DV++TG N TI
Sbjct: 141 TLFLESGATILGSEDFNDYPLIPGLPSYGRGRELPGSRYSSLINGDGLEDVIITGNNGTI 200
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW +R K TR +L+E++ + ++ ISNLT +SP W +HPVYS NV+++ +
Sbjct: 201 DGQGAVWWSSFRSKTLEHTRGHLLELIEAQDILISNLTFQNSPFWTIHPVYSKNVVVKRV 260
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TI P++SPNTDGI+PDS IED YI GDD +++KSGWD+YG GMP++++ I+R
Sbjct: 261 TILNPLNSPNTDGIDPDSSQYVCIEDCYISVGDDAISIKSGWDQYGTGFGMPSKYIRIQR 320
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
++ S SA I+ GSEMSGGI D+ +D+ N++ GVR KT+VGRGAY++ + V + M
Sbjct: 321 VVAFSHTSAGISFGSEMSGGISDIEVDDMVITNSRWGVRFKTSVGRGAYIRNVTVNNIVM 380
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
T++ + G+YG HPD ++ A P + I ++V +N+TQ+ L G+ + PF I
Sbjct: 381 HTVRTAIAVMGNYGEHPDENWNRTAYPVIENILVGNIVGENITQAGLLLGLPDAPFHDIH 440
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL 449
++ V + T K+ WNC+ + G + V P+ C L
Sbjct: 441 LTKVVLD-TRTTKQGPWNCSWVTGFYNFVLPKPCPEL 476
>gi|356564613|ref|XP_003550546.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 460
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/410 (45%), Positives = 262/410 (63%), Gaps = 3/410 (0%)
Query: 49 ALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNL 108
AL R H+ + +FG VGDGKT NT AF AI L +A GGAQL VPPG WLT SFNL
Sbjct: 42 ALKPRPHTVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGTWLTQSFNL 101
Query: 109 TSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGG 168
TSH TL++ K A++L SQD W ++ PLPSYGRG + PGGR+ SL+ G L DVV+TG
Sbjct: 102 TSHLTLFLEKGAVILGSQDPFHWEVVDPLPSYGRGVEVPGGRYQSLVNGYMLHDVVITGN 161
Query: 169 NATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
N I+G G WW + N +RP+LIE++ S+ V +SNLT +++P++++HPVY SNV
Sbjct: 162 NGIIDGMGLGWWELFSSHSLNYSRPHLIELVASNRVVVSNLTFLNAPAYSIHPVYCSNVH 221
Query: 229 IQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHL 288
I ++I AP +SP T GI PDS + IED I +G D +++KSGWDEYGI G PT+++
Sbjct: 222 IHNVSISAPQESPYTIGIVPDSSDHVCIEDCVIATGYDAISLKSGWDEYGIAYGRPTENV 281
Query: 289 IIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVR 348
IRR+ + + IA GS+MSGGI ++ E++ N++SG+ +T GRG Y+KEI +
Sbjct: 282 HIRRVHLQAYSGSTIAFGSDMSGGISNILVENVHLYNSKSGIEFRTMRGRGGYMKEIIIS 341
Query: 349 RMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPF 408
+ M+ + TG GSHPD FDP ALP + I +DM+ N+T + G++ PF
Sbjct: 342 DIEMENIYTAMAATGYCGSHPDDKFDPNALPLLDHIILQDMIGTNITIAGSFAGLQESPF 401
Query: 409 TGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTDCF 458
T IC+SNVT+ + + W C+N+ G + V P+ C L + +DC
Sbjct: 402 TNICLSNVTLSINSV-SSIPWECSNVSGFSDSVLPKPCPDL--ETLSDCL 448
>gi|115489012|ref|NP_001066993.1| Os12g0554800 [Oryza sativa Japonica Group]
gi|113649500|dbj|BAF30012.1| Os12g0554800, partial [Oryza sativa Japonica Group]
Length = 424
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/394 (46%), Positives = 262/394 (66%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +++FG VGDG T NT F AI L +A GGAQL VP G+WLTGSFNLTSH
Sbjct: 6 RPHSVTISEFGAVGDGVTVNTLPFQNAIFYLRSFADKGGAQLYVPRGRWLTGSFNLTSHL 65
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
T+++ KDA+++ +++ SEWP++ PLPSYG+G D PG R SLI G N+TDVV+TG N I
Sbjct: 66 TIFLEKDAVIIGAKEVSEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVITGNNGII 125
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW +R + N +RP+L+E + S+++ ISNLTL++SP+W +HPV+ SNV++ +
Sbjct: 126 DGQGLTWWNWFRSNKLNYSRPHLVEFVDSEDIVISNLTLLNSPAWGIHPVFCSNVMVHDV 185
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TIR +D+P TDGI PDSC+N IED+ I D +++KSGWD YGI +G P + I R
Sbjct: 186 TIRTSLDAPLTDGIVPDSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISR 245
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ + AA+A GSEMSGGI D+ + + + G+ KTA GRG Y++++ + + M
Sbjct: 246 VDLQASLGAALAFGSEMSGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQM 305
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+ + TGD+ +HPD FDP ALP + I ++MV N++ + L GI DPFT IC
Sbjct: 306 EDVNVAIKFTGDWSTHPDNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNIC 365
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQAC 446
+SN++ L + + W+C+NI G + V P+ C
Sbjct: 366 LSNISFSLADSTQSSSWSCSNISGYSELVFPEPC 399
>gi|225444665|ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
gi|297738532|emb|CBI27777.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/439 (45%), Positives = 271/439 (61%), Gaps = 13/439 (2%)
Query: 27 GLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKY 86
GLL+ + A RP R LTDFGGVGD T NT+AF AIS +SK
Sbjct: 55 GLLTFRRAPARPLPR----------LRPAVYNLTDFGGVGDSVTVNTEAFERAISAISKL 104
Query: 87 AADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDE 146
GG QL VP G WLT FNLTSH TL++ +DA++L QDE WPL+PPLPSYG GR+
Sbjct: 105 GKKGGGQLNVPAGNWLTAPFNLTSHMTLFLDQDAVILGIQDEKYWPLMPPLPSYGYGREH 164
Query: 147 PGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQI 206
G R+ SLI G NL DVV+TG N TINGQG+ WW KYR+K N TR L+++M+S ++ I
Sbjct: 165 RGARYGSLIHGQNLKDVVITGHNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVI 224
Query: 207 SNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI-DSPNTDGINPDSCTNTRIEDNYIVSGD 265
SN+TL DSP W +HP NV I+ +TI API ++PNTDGI+PDSC + IED YI GD
Sbjct: 225 SNITLRDSPFWTLHPYDCKNVTIKNVTILAPIFEAPNTDGIDPDSCEDMVIEDCYISVGD 284
Query: 266 DCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN 325
D +A+KSGWD+YG+ G P+ +++IR L+ S SA +++GSEMSGG+ +V E++ N
Sbjct: 285 DGIAIKSGWDQYGVAYGRPSVNILIRNLVIRSMVSAGVSIGSEMSGGVSNVTVENLLVWN 344
Query: 326 TQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGIN 385
++ VRIKT+ GRG YV+ I R +T ++ + DY HPD GFDPKALP + I+
Sbjct: 345 SRRAVRIKTSPGRGGYVQHINYRNLTFDNVRVGIVIKTDYNEHPDDGFDPKALPILEDIS 404
Query: 386 YRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQG-ITSRVTPQ 444
+ + V ++ G P + ++++ +T K K + + C ++G + V P
Sbjct: 405 FTGVHGQGVRVPVRIHGSEEIPVKKVTFRDMSVGITYKKKHI-FQCAYVEGRVIGTVFPA 463
Query: 445 ACELLPKKEPTDCFFPDDK 463
CE L + + + K
Sbjct: 464 PCENLDRYDEQEQLIKHSK 482
>gi|255571381|ref|XP_002526639.1| polygalacturonase, putative [Ricinus communis]
gi|223534031|gb|EEF35751.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/397 (48%), Positives = 269/397 (67%), Gaps = 2/397 (0%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFGGVGDGKTSNT+ F A+ + ++A GG+QLIVP G+WLTGSFNLTS+FTL++ +
Sbjct: 80 IVDFGGVGDGKTSNTETFRKAVRYMQRFAEKGGSQLIVPRGRWLTGSFNLTSNFTLFLEE 139
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A++L SQD EWP++ PLPSYGRGR+ GGR SLI G LT+V++TG N +I+GQG+
Sbjct: 140 GAVILGSQDPKEWPIIEPLPSYGRGRERLGGRHISLIHGNGLTNVIITGNNGSIDGQGKM 199
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW + + TR +L+E+M S N+ ISNLT +SP W +HPVY SNV+++ +TI AP+
Sbjct: 200 WWELWWNRTLEHTRGHLVELMNSHNILISNLTFRNSPFWTIHPVYCSNVVVKDMTILAPL 259
Query: 239 DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISP 298
++PNTDGI+PDS TN IED YI SGDD VAVKSGWD+YGIK P+ H+I+RR+ +P
Sbjct: 260 NAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKTARPSSHIIVRRVSGTTP 319
Query: 299 DSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYV 358
+ + +GSEMSGGI +V +D+ ++ +GVRIKT +GRG Y+ I + +TM+ +K
Sbjct: 320 TCSGVGIGSEMSGGIFNVMIQDLHIWDSAAGVRIKTDIGRGGYISNITLHNITMERVKIP 379
Query: 359 FWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
+ HPD +DP A+P V G++ +++ N T++ L GI++ PF GIC+ NVT
Sbjct: 380 IRFSRGSNDHPDERWDPNAIPVVKGVSISNVICVNSTKAPVLQGIKDAPFGGICMKNVT- 438
Query: 419 KLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPT 455
L W+C + G + V P C L + +
Sbjct: 439 -LVGLASSTSWHCEFVSGFANEVFPMPCPQLQNNDSS 474
>gi|115445377|ref|NP_001046468.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|50251675|dbj|BAD29699.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|50252020|dbj|BAD27952.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113535999|dbj|BAF08382.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|215686497|dbj|BAG87758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765347|dbj|BAG87044.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622550|gb|EEE56682.1| hypothetical protein OsJ_06128 [Oryza sativa Japonica Group]
Length = 443
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/397 (47%), Positives = 253/397 (63%), Gaps = 3/397 (0%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R + + +FGGVGDG+T NT AF+ A+ + GG L+VP G WLTGSFNLTSH
Sbjct: 39 RPETVSIAEFGGVGDGRTVNTWAFHKAVYRIQHQRRRGGTTLLVPAGTWLTGSFNLTSHM 98
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL++ + A+L A+Q+ WPL PLPSYGRGR+ PG R++S I G L D+V+TG I
Sbjct: 99 TLFLARGAVLKATQETRSWPLAEPLPSYGRGRELPGARYTSFIHGDGLRDIVITGDKGII 158
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG+ WW +R++ TRP L+E M S + ISN+ L +SP WN+HPVY NV+I +
Sbjct: 159 DGQGDVWWNMWRQRTLQHTRPNLLEFMHSSGIHISNIVLKNSPFWNIHPVYCDNVVITNM 218
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
I AP DSPNTDG++PDS TN IED+YI +GDD VA+KSGWDEYGI G P+ + IRR
Sbjct: 219 MIIAPHDSPNTDGVDPDSSTNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRR 278
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ SP S IA+GSE SGG+ +V ED + N+ G+ IKT +GRG +++ I V + M
Sbjct: 279 VRGSSPFS-GIAIGSEASGGVSNVLVEDCSIFNSGYGIHIKTNIGRGGFIRNITVDNVRM 337
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+++ + GD G HPD F ALPTV ++ +++ NV Q ++GIRN PFT IC
Sbjct: 338 NSVRNGLRIAGDVGDHPDEHFSQLALPTVDAVSIKNVWGVNVQQPGSIEGIRNSPFTRIC 397
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL 449
++NV KL W C ++ G V P C L
Sbjct: 398 LANV--KLFGWRNNAAWKCRDVHGAALGVQPGPCAEL 432
>gi|226504332|ref|NP_001141464.1| uncharacterized protein LOC100273574 precursor [Zea mays]
gi|194704686|gb|ACF86427.1| unknown [Zea mays]
gi|223949711|gb|ACN28939.1| unknown [Zea mays]
gi|413950643|gb|AFW83292.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
gi|413950644|gb|AFW83293.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
Length = 446
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/397 (46%), Positives = 258/397 (64%), Gaps = 3/397 (0%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R + FGG GDG+T NT AF A++++ + AA GGA+L VPPG WLTG FNLTS
Sbjct: 40 RGARVSVASFGGAGDGRTLNTAAFARAVASIERRAAPGGAELYVPPGVWLTGPFNLTSRM 99
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL++ + A++ A+QD S WPL+ PLPSYGRGR+ PGGR++SLI G L DVV+TG N TI
Sbjct: 100 TLFLARGAVIRATQDTSSWPLIEPLPSYGRGRELPGGRYTSLIHGNGLQDVVITGENGTI 159
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW ++ + TRP+L+E+M S ++ +SN+ DSP WN+HPVY SNV+I+ +
Sbjct: 160 DGQGSAWWDMWKNRTLLYTRPHLLELMSSSDIIVSNVVFQDSPFWNIHPVYCSNVVIRNV 219
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TI AP DSPNTDGI+PDS +N IED YI +GDD +A+KSGWDEYGI G + + +RR
Sbjct: 220 TILAPHDSPNTDGIDPDSSSNICIEDCYISTGDDSIAIKSGWDEYGIAYGRASSGITVRR 279
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ SP A A+GSE SGG+++V AE + N+ G+ +KT GRG +++ I V +T+
Sbjct: 280 ITGSSP-FAGFAVGSETSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTL 338
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
++Y + GD G+HPD ++ ALP V + +++ NV ++ + GI N F+ IC
Sbjct: 339 DNVRYGLRIVGDVGNHPDDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRIC 398
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL 449
+SNV K T W C + G V P C L
Sbjct: 399 LSNV--KFTGGAPVRPWKCEAVSGGALDVQPSPCTEL 433
>gi|357450133|ref|XP_003595343.1| Polygalacturonase [Medicago truncatula]
gi|355484391|gb|AES65594.1| Polygalacturonase [Medicago truncatula]
gi|388518965|gb|AFK47544.1| unknown [Medicago truncatula]
Length = 474
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/405 (46%), Positives = 264/405 (65%), Gaps = 3/405 (0%)
Query: 45 IEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTG 104
+ ++A R LTDFGGVGDG T NTKAF A+S +SK+ GGAQL VPPG WLT
Sbjct: 44 LNWEAPKLRPVVFNLTDFGGVGDGVTLNTKAFERAVSVISKFRNQGGAQLNVPPGFWLTS 103
Query: 105 SFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVV 164
FNLTS TL++ +DA++LA QDE WPL+P LPSYG GR+ PG R+SSLI G NL DVV
Sbjct: 104 PFNLTSRMTLFLARDAVILAVQDEKYWPLMPALPSYGYGREHPGPRYSSLIHGQNLKDVV 163
Query: 165 VTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYS 224
+TG N TINGQG+ WW K+ K N TR L+++M+S ++ ISN+TL DSP W +HP
Sbjct: 164 ITGHNGTINGQGQTWWTKHLHKLLNYTRGPLVQIMYSSDIVISNITLRDSPFWTLHPYDC 223
Query: 225 SNVLIQGLTIRAPI-DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGM 283
NV I+ +TI AP+ +PNTDGI+PDSC + IED YI GDD +A+KSGWD+YGI
Sbjct: 224 KNVTIKNVTILAPVYHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYAK 283
Query: 284 PTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVK 343
P++++IIR L+ S SA I++GSEMSGG+ +V E+I ++ +RIKTA GRG YV+
Sbjct: 284 PSKNIIIRNLVVRSNVSAGISIGSEMSGGVSNVTIENILVWESRRAIRIKTAPGRGGYVR 343
Query: 344 EIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGI 403
+I R +T ++ + DY HPD G+DP ALP + I++ ++ + V ++ G
Sbjct: 344 QITYRNITFHNVRVGIVIKTDYNEHPDDGYDPTALPILRDISFTNIRGEGVRVPVRITGS 403
Query: 404 RNDPFTGICISNVTIKLTEKPKELQWNCTNIQG-ITSRVTPQACE 447
P + ++ + +T K K + + C ++G + + P+ C
Sbjct: 404 EEIPVRNVTFHDMNVGITYKKKHI-FQCAFVEGRVIGTIFPKPCR 447
>gi|168058134|ref|XP_001781065.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667462|gb|EDQ54091.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 446
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/408 (45%), Positives = 259/408 (63%), Gaps = 2/408 (0%)
Query: 46 EFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGS 105
+++ R HS +++FG VGDGKT NT AF A+ L YA GG QL +P G+WLTGS
Sbjct: 38 KYKNWKNRPHSVSISEFGAVGDGKTLNTHAFENAMFYLRTYADKGGVQLYIPAGRWLTGS 97
Query: 106 FNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVV 165
L SH TL++ +A +L SQD +++P++P LPSYGRGR+ PG R SLI G L DVV+
Sbjct: 98 IKLISHLTLFLENEATILGSQDLNDYPVIPGLPSYGRGRELPGPRHRSLINGEGLEDVVI 157
Query: 166 TGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSS 225
TG N TI+GQG WW ++ K + TR +L+E++ S ++ ISNLT DSP W +HPVY
Sbjct: 158 TGDNGTIDGQGAVWWNAFQNKTLDYTRGHLVELIDSKDILISNLTFRDSPFWTIHPVYCR 217
Query: 226 NVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPT 285
NV+++ +T+ AP++SPNTDGI+PDS IED YI GDD +A+KSGWDEYG GMP+
Sbjct: 218 NVVVKDMTLLAPLNSPNTDGIDPDSSQYVCIEDCYISVGDDAIAIKSGWDEYGTAYGMPS 277
Query: 286 QHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEI 345
QH+ IRR++ S SA IA GSEMSGGI DV+ + + + G+R KT GRG Y++ I
Sbjct: 278 QHIDIRRIVVHSETSAGIAFGSEMSGGISDVKVDHMMIFGARWGIRFKTGPGRGGYIRNI 337
Query: 346 YVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRN 405
V + M+++ TG+YG HPD ++ P + + ++V +++T + G+
Sbjct: 338 TVDNVNMRSVNTAIAFTGNYGEHPDENWNRTDYPVIENVLIENIVGEDITHAGLFLGLPE 397
Query: 406 DPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKE 453
PF I ++N I L K + WNC+++ G V PQ C K+E
Sbjct: 398 SPFLNIHLAN--IALDTKSESEDWNCSSVAGTYFFVWPQPCPDFTKEE 443
>gi|302783324|ref|XP_002973435.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
gi|300159188|gb|EFJ25809.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
Length = 468
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/393 (49%), Positives = 263/393 (66%), Gaps = 3/393 (0%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAA-DGGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
LTDFGG+GDG+T NT+AF A++ +S AA GGAQL VP G WLT FNLTSH TL++
Sbjct: 53 LTDFGGIGDGRTINTRAFERAVAEISSAAAKSGGAQLNVPAGVWLTAPFNLTSHMTLFLE 112
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
+DA +LA+Q E WPL+ PLPSYGRGR+ PG R+ SLI G +L D+V+TG N TI+G G
Sbjct: 113 EDATILATQSEDLWPLMQPLPSYGRGRELPGPRYGSLIHGQHLEDIVITGHNGTIDGNGR 172
Query: 178 PWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAP 237
WW K + KQ TR LI+ M+S ++IS++TL +SP W VHP NV I+G+TI AP
Sbjct: 173 KWWEKAKLKQLKHTRGRLIQFMWSRGIEISDVTLRNSPFWTVHPYDCENVTIRGVTIIAP 232
Query: 238 IDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
D+PNTDGI+PDSC N IE+ YI GDD VAVKSGWD+YGI G P ++ IR + +
Sbjct: 233 PDAPNTDGIDPDSCRNVLIENCYISVGDDGVAVKSGWDQYGIDYGKPCANITIRNIQVNA 292
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
P SA +++GSEMSGGI +V E++ N++ GVRIKT GRG YV +++ R +TM+T++
Sbjct: 293 PVSAGVSIGSEMSGGITNVTVENVYIWNSKRGVRIKTTPGRGGYVTQVFYRNITMETVRV 352
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
+ DYG HPD +DP ALP V I + + V A++ G + P G+ I ++
Sbjct: 353 GIVIKTDYGDHPDEFYDPTALPVVEKIFFDGIYGSEVRIPARIYGSKEVPVRGLEIRDMN 412
Query: 418 IKLTEKPKELQWNCTNIQG-ITSRVTPQACELL 449
+ +T K K + + C+ +QG + + P+ CE L
Sbjct: 413 VGVTRKKKHV-FQCSFLQGQVFGTIFPKPCEDL 444
>gi|302767960|ref|XP_002967400.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
gi|300165391|gb|EFJ31999.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
Length = 426
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/424 (44%), Positives = 260/424 (61%), Gaps = 6/424 (1%)
Query: 26 LGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSK 85
+G SP + C ++ R S + DFGGV DG T NTKAF AI ++
Sbjct: 1 MGDCSPAIQGCNSVESRLVPGLSRARPRVFS--IADFGGVSDGITLNTKAFQKAIDHIGS 58
Query: 86 YAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRD 145
+ GGA L +P GKWLTG FNLTSH TL++ +DA +LAS+D +WP++ PLPSYGRGR+
Sbjct: 59 FGKLGGATLYIPRGKWLTGCFNLTSHMTLFLEQDATILASEDPQDWPVVDPLPSYGRGRE 118
Query: 146 EPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQ 205
PG R++SL+ G +TDV +TG N TI+GQG WW ++R K TR L+E MFS N+
Sbjct: 119 LPGKRYTSLLHGLRITDVAITGNNGTIDGQGLVWWNRFRSKTLQHTRGSLVEFMFSSNIL 178
Query: 206 ISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGD 265
+ N+TLI+SP W +HPVY+S+V+I+G+TI AP +PNTDG++PDS +N I D YI +GD
Sbjct: 179 VHNVTLINSPFWTLHPVYTSDVMIKGVTILAPHKAPNTDGVDPDSSSNVCIRDTYISNGD 238
Query: 266 DCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN 325
D VAVKSGWDEYG+ P+ + + L S I+LGSEMSGGI +V A ++
Sbjct: 239 DAVAVKSGWDEYGLAFNRPSHDVFLVNLTV--SGSHGISLGSEMSGGIYNVHAYGVSISG 296
Query: 326 TQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGIN 385
G+ IKT+ GRGAY++ + F TG YG HPD G++ A T+ I+
Sbjct: 297 AVQGIHIKTSAGRGAYIRNASFASFEILDTGVAFSFTGIYGDHPDAGYNASAFATIENIS 356
Query: 386 YRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQA 445
+RD+V V ++ G+ PF C ++V ++L K WNC+ I+G + V+P
Sbjct: 357 FRDVVGMRVNRAGDFRGVPQSPFRHTCFTDVALELNGKSN--HWNCSYIEGYSRHVSPPP 414
Query: 446 CELL 449
C L
Sbjct: 415 CPEL 418
>gi|356501888|ref|XP_003519755.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 455
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/399 (45%), Positives = 256/399 (64%), Gaps = 1/399 (0%)
Query: 48 QALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFN 107
+ L+ R HS + +FG VGDGKT NT AF A+ +A GGA+L VP GKWLTGSFN
Sbjct: 31 KVLDPRPHSVSILEFGAVGDGKTLNTVAFQNAVFYAKSFADKGGAKLYVPSGKWLTGSFN 90
Query: 108 LTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG 167
LTSH TL++ + A ++ASQD + W + PLPSYGRG D P GR+ SLI+G NL+DVV+TG
Sbjct: 91 LTSHLTLFLERGATIIASQDYAHWTAMDPLPSYGRGIDVPVGRYRSLIYGQNLSDVVITG 150
Query: 168 GNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNV 227
N I+GQG WW N +RP++IE++ SDN+ ISNLT ++SP+W++HPVY SN+
Sbjct: 151 DNGIIDGQGSVWWDLISTHSLNYSRPHIIELVGSDNIIISNLTFLNSPAWSIHPVYCSNI 210
Query: 228 LIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQH 287
IQ +T++AP P T GI PDS + I++ I +G D + +KSGWDEYG+ G PT +
Sbjct: 211 QIQKITVQAPTKFPYTSGIVPDSSEHVCIDNCNISTGHDAIVLKSGWDEYGVAYGKPTSN 270
Query: 288 LIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYV 347
+ IR + S A +A GSEMSGGI D+ AE + N+ G+ +KT GRG Y+K I++
Sbjct: 271 VHIRGVYLQSSSGAGLAFGSEMSGGISDIIAEQLHITNSTFGIELKTTRGRGGYMKNIFI 330
Query: 348 RRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDP 407
++ + MTG GSHPD +DP A+P V + + +++ N+ + GI + P
Sbjct: 331 SDAKLENIYLGISMTGSSGSHPDDKYDPNAVPDVGNVTFENVIGANIAIAGNFSGIVDSP 390
Query: 408 FTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQAC 446
FT IC+SNVT + + W C+N+ GI+ V P+ C
Sbjct: 391 FTPICLSNVTFSTSSE-SSPSWFCSNVMGISKEVFPEPC 428
>gi|255537765|ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223549848|gb|EEF51336.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 446
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/406 (48%), Positives = 262/406 (64%), Gaps = 1/406 (0%)
Query: 50 LNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLT 109
+ R + DFGGVGDGKT NTKAF AI + GG L +PPG +LTGSFNLT
Sbjct: 35 MRYRNDKISIADFGGVGDGKTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVFLTGSFNLT 94
Query: 110 SHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGN 169
SH TLY+ + A++ A+QD WPL+ PLPSYGRGR+ GGR+ S I G L DVV+TG N
Sbjct: 95 SHMTLYLARGAVIKATQDTWNWPLIAPLPSYGRGRERLGGRYMSFIHGDGLHDVVITGEN 154
Query: 170 ATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
TI+GQG+ WW +R++ TRP L+E + S + ISN+ +SP WN+HPVY SNV+I
Sbjct: 155 GTIDGQGDIWWNMWRQRTLQFTRPNLVEFLNSRGIIISNVIFQNSPFWNIHPVYCSNVVI 214
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
+ +TI AP DSPNTDGI+PDS +N IED+YI +GDD VAVKSGWDEYGI G P+ H+
Sbjct: 215 RFVTILAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSHIT 274
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRR 349
IRR+ SP A IA+GSE SGG++ V AE+I + G+ +KT +GRG +++ I
Sbjct: 275 IRRITGSSP-FAGIAVGSETSGGVEHVLAENINLYDMGVGLHVKTNIGRGGFIRNITFSD 333
Query: 350 MTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFT 409
+ MK + + GD G HPD ++P ALP V GI +R + +NV Q + G+++ PFT
Sbjct: 334 VYMKNARKGIKIAGDVGDHPDDNYNPNALPVVKGIIFRGVWGENVLQPGAIQGLKSSPFT 393
Query: 410 GICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPT 455
GIC+SN+ + P+ W C+++ G V+P C L T
Sbjct: 394 GICLSNINLHGVPGPRSTPWKCSDVSGAALEVSPFPCSELATTHQT 439
>gi|255551873|ref|XP_002516982.1| Polygalacturonase, putative [Ricinus communis]
gi|223544070|gb|EEF45596.1| Polygalacturonase, putative [Ricinus communis]
Length = 454
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/401 (45%), Positives = 260/401 (64%), Gaps = 3/401 (0%)
Query: 49 ALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNL 108
+L+ R HS + +FG VGDGKT NT +F AI L +A GGA+L VPPG+WLTGSFNL
Sbjct: 31 SLDPRPHSVSILEFGAVGDGKTLNTISFQNAIFYLKSFADKGGAKLYVPPGRWLTGSFNL 90
Query: 109 TSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGG 168
TSH TL++ K A++L SQD S + L+ PLPSYGRG + PGGR+ SLI G L DVV+TG
Sbjct: 91 TSHLTLFLEKGAVILGSQDPSHYDLIEPLPSYGRGIELPGGRYRSLINGYKLRDVVITGD 150
Query: 169 NATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
N TI+GQG WW + N +RP+L+E + S+ + +SNLT +++P++N+HPVY SNVL
Sbjct: 151 NGTIDGQGSVWWDWFNSHSLNYSRPHLVEFIESERIVVSNLTFLNAPAYNIHPVYCSNVL 210
Query: 229 IQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHL 288
+Q +++ AP +SP T GI PDS N IE++ I G D +++KSGWDEYGI T+ +
Sbjct: 211 VQNMSLSAPPESPQTIGIVPDSSNNVCIEESIIKMGYDAISLKSGWDEYGIAYDRATRDV 270
Query: 289 IIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVR 348
IRR+ S ++IA GSEMSGGI +V E + N+ SG+ +T GRG Y+K I++
Sbjct: 271 HIRRVHLQSSSGSSIAFGSEMSGGISNVHVEQVHLYNSFSGIGFRTTKGRGGYIKRIFIS 330
Query: 349 RMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPF 408
+ ++ + GD+G HPD FDPKA+P V I +++ N++ + GI++ PF
Sbjct: 331 DVELENINLALGAIGDHGLHPDDKFDPKAVPVVDQITLQNLTGTNISTAGNFTGIQDSPF 390
Query: 409 TGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL 449
T +C+ N+T+ ++ W C+N+ G + V P C L
Sbjct: 391 TSLCLFNITLMVSSSNS---WTCSNVIGYSDSVFPVPCPEL 428
>gi|356558431|ref|XP_003547510.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 489
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/391 (47%), Positives = 259/391 (66%), Gaps = 3/391 (0%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
LT+FGGVGDG T NT+AF + +SK GG QL VPPG+WLT FNLTSH TL++ +
Sbjct: 73 LTEFGGVGDGVTLNTEAFERGVGAISKLGDKGGGQLNVPPGRWLTAPFNLTSHMTLFLAR 132
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
DA++LA QDE WPL+P LPSYG GR+ PG R+SSLI G NL DVV+TG N TINGQG+
Sbjct: 133 DAVILAVQDEKYWPLMPALPSYGYGREHPGPRYSSLIHGQNLVDVVITGHNGTINGQGQT 192
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW KYR+K N TR L+++++S N+ ISN+TL DSP W +HP NV ++ +TI AP+
Sbjct: 193 WWTKYRQKLLNHTRGPLVQILWSSNIVISNITLRDSPFWTLHPYDCKNVTVKKVTILAPV 252
Query: 239 D-SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
+PNTDGI+PDSC + IED YI GDD +A+KSGWD+YGI G P+++++IR L+ S
Sbjct: 253 SHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGITYGRPSKNIVIRNLVVRS 312
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
SA I++GSEMSGG+ +V E+I ++ +RIKTA GRG YV++I + + +K ++
Sbjct: 313 NVSAGISIGSEMSGGVSNVLVENILVWESRRAMRIKTAPGRGGYVRQITYKNLMLKNVRV 372
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
+ DY HP G+DP+ALP + I++ ++ V ++ G P + ++
Sbjct: 373 GIVIKTDYNEHPGAGYDPRALPILRDISFMNIRGQGVRVPVRIQGSEQIPVRNVTFQDMK 432
Query: 418 IKLTEKPKELQWNCTNIQG-ITSRVTPQACE 447
+ +T K K + + C +QG + P C+
Sbjct: 433 VGITYKKKHI-FQCAFVQGQAIGTIFPSPCD 462
>gi|108862809|gb|ABA99544.2| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|222617271|gb|EEE53403.1| hypothetical protein OsJ_36464 [Oryza sativa Japonica Group]
Length = 457
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/392 (46%), Positives = 261/392 (66%)
Query: 55 HSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTL 114
HS +++FG VGDG T NT F AI L +A GGAQL VP G+WLTGSFNLTSH T+
Sbjct: 41 HSVTISEFGAVGDGVTVNTLPFQNAIFYLRSFADKGGAQLYVPRGRWLTGSFNLTSHLTI 100
Query: 115 YIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATING 174
++ KDA+++ +++ SEWP++ PLPSYG+G D PG R SLI G N+TDVV+TG N I+G
Sbjct: 101 FLEKDAVIIGAKEVSEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVITGNNGIIDG 160
Query: 175 QGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTI 234
QG WW +R + N +RP+L+E + S+++ ISNLTL++SP+W +HPV+ SNV++ +TI
Sbjct: 161 QGLTWWNWFRSNKLNYSRPHLVEFVDSEDIVISNLTLLNSPAWGIHPVFCSNVMVHDVTI 220
Query: 235 RAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLI 294
R +D+P TDGI PDSC+N IED+ I D +++KSGWD YGI +G P + I R+
Sbjct: 221 RTSLDAPLTDGIVPDSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVD 280
Query: 295 CISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKT 354
+ AA+A GSEMSGGI D+ + + + G+ KTA GRG Y++++ + + M+
Sbjct: 281 LQASLGAALAFGSEMSGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQMED 340
Query: 355 MKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICIS 414
+ TGD+ +HPD FDP ALP + I ++MV N++ + L GI DPFT IC+S
Sbjct: 341 VNVAIKFTGDWSTHPDNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNICLS 400
Query: 415 NVTIKLTEKPKELQWNCTNIQGITSRVTPQAC 446
N++ L + + W+C+NI G + V P+ C
Sbjct: 401 NISFSLADSTQSSSWSCSNISGYSELVFPEPC 432
>gi|297818750|ref|XP_002877258.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297323096|gb|EFH53517.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/400 (46%), Positives = 264/400 (66%), Gaps = 3/400 (0%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
LTDFG VGDG T NT+AF AI +SK A GG QL VPPG+WLT FNLTS+ TL++ +
Sbjct: 71 LTDFGAVGDGVTVNTEAFERAIYKISKLATKGGGQLNVPPGRWLTAPFNLTSYMTLFLAE 130
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+A +LA QDE WPLLPPLPSYG GR+ G R+ S I G NL DVVVTG N +INGQG+
Sbjct: 131 NAEILALQDEKYWPLLPPLPSYGYGREHHGPRYGSFIHGQNLRDVVVTGNNGSINGQGQT 190
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW KYR+K N TR L+++M+S ++ +N+TL DSP W +HP NV I +TI AP+
Sbjct: 191 WWKKYRQKLLNHTRGPLVQIMWSSDIVFANITLRDSPFWTLHPYDCKNVTITNMTILAPV 250
Query: 239 -DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
++PNTDGI+PDSC + IE++YI GDD +A+KSGWD+YG G P+++++IR LI S
Sbjct: 251 FEAPNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGRPSKNILIRNLIIRS 310
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
SA I++GSEMSGG+ ++ E+I +++ GVRIKTA GRG YV++I R +T+ ++
Sbjct: 311 MVSAGISIGSEMSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELRV 370
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
+ DY HPD GF+P+A P + INY + V ++ G + P + +++
Sbjct: 371 GIVIKTDYNEHPDGGFNPQAFPILENINYTGIYGQGVRVPVRIQGSKEIPVKNVTFRDMS 430
Query: 418 IKLTEKPKELQWNCTNIQG-ITSRVTPQACELLPKKEPTD 456
+ +T K K + + C ++G + + P CE L + + +
Sbjct: 431 VGITYKKKHI-FQCAYVEGRVIGTIFPAPCENLDRYDEQE 469
>gi|125553514|gb|EAY99223.1| hypothetical protein OsI_21181 [Oryza sativa Indica Group]
Length = 448
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/400 (47%), Positives = 254/400 (63%), Gaps = 4/400 (1%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ FGGVGDG+ NT AF A++ + + A GGA L VP G WLTG FNLTSH TL++ +
Sbjct: 50 VASFGGVGDGRALNTAAFARAVARIERRRARGGALLYVPAGVWLTGPFNLTSHMTLFLAR 109
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A++ A+QD S WPL+ PLPSYGRGR+ PGGR+ SLI G L DV +TG N TI+GQG
Sbjct: 110 GAVIRATQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGDGLQDVFITGENGTIDGQGSV 169
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW +RK+ TRP+L+E++ S +V ISN+ DSP WN+HPVY SNV+I +T+ AP
Sbjct: 170 WWDMWRKRTLPFTRPHLLELISSTDVIISNVVFQDSPFWNIHPVYCSNVVITNVTVLAPH 229
Query: 239 DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISP 298
DSPNTDGI+PDS +N IED+YI +GDD +++KSGWDEYGI G P+ + IRR+ P
Sbjct: 230 DSPNTDGIDPDSSSNVCIEDSYISTGDDLISIKSGWDEYGIAFGRPSSGITIRRITGSGP 289
Query: 299 DSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYV 358
A A+GSE SGG+++V E + G+ +KT GRG +++ I V +T+ +Y
Sbjct: 290 -FAGFAVGSETSGGVENVHVEHLNFFGMGVGIHVKTNSGRGGFIRNITVSEVTLNGARYG 348
Query: 359 FWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
+ GD G HPD +DP LP V G+ +++ N+ Q+ + GIR+ F+ IC+SNV
Sbjct: 349 LRIAGDVGGHPDASYDPSKLPVVDGVTIKNVWGQNIRQAGLVRGIRDSVFSRICLSNV-- 406
Query: 419 KLTEKPKELQWNCTNIQGITSRVTPQAC-ELLPKKEPTDC 457
KL W C + G V P C EL E + C
Sbjct: 407 KLYGGDSVGPWKCRAVSGGALDVQPSPCAELTSTSEMSFC 446
>gi|115465733|ref|NP_001056466.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|113580017|dbj|BAF18380.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|125568884|gb|EAZ10399.1| hypothetical protein OsJ_00232 [Oryza sativa Japonica Group]
Length = 448
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/400 (47%), Positives = 254/400 (63%), Gaps = 4/400 (1%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ FGGVGDG+ NT AF A++ + + A GGA L VP G WLTG FNLTSH TL++ +
Sbjct: 50 VASFGGVGDGRALNTAAFARAVARIERRRARGGALLYVPAGVWLTGPFNLTSHMTLFLAR 109
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A++ A+QD S WPL+ PLPSYGRGR+ PGGR+ SLI G L DV +TG N TI+GQG
Sbjct: 110 GAVIRATQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGDGLQDVFITGENGTIDGQGSV 169
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW +RK+ TRP+L+E++ S +V ISN+ DSP WN+HPVY SNV+I +T+ AP
Sbjct: 170 WWDMWRKRTLPFTRPHLLELISSTDVIISNVVFQDSPFWNIHPVYCSNVVITNVTVLAPH 229
Query: 239 DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISP 298
DSPNTDGI+PDS +N IED+YI +GDD +++KSGWDEYGI G P+ + IRR+ P
Sbjct: 230 DSPNTDGIDPDSSSNVCIEDSYISTGDDLISIKSGWDEYGIAFGRPSSGITIRRITGSGP 289
Query: 299 DSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYV 358
A A+GSE SGG+++V E + G+ +KT GRG +++ I V +T+ +Y
Sbjct: 290 -FAGFAVGSETSGGVENVHVEHLNFFGMGVGIHVKTNSGRGGFIRNITVSEVTLNGARYG 348
Query: 359 FWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
+ GD G HPD +DP LP V G+ +++ N+ Q+ + GIR+ F+ IC+SNV
Sbjct: 349 LRIAGDVGGHPDASYDPSKLPVVDGVTIKNVWGQNIRQAGLVRGIRDSVFSRICLSNV-- 406
Query: 419 KLTEKPKELQWNCTNIQGITSRVTPQAC-ELLPKKEPTDC 457
KL W C + G V P C EL E + C
Sbjct: 407 KLYGGDSVGPWKCRAVSGGALDVQPSPCAELTSTSEMSFC 446
>gi|255550387|ref|XP_002516244.1| polygalacturonase, putative [Ricinus communis]
gi|223544730|gb|EEF46246.1| polygalacturonase, putative [Ricinus communis]
Length = 494
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/397 (46%), Positives = 262/397 (65%), Gaps = 3/397 (0%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
LTDFGGVGDG T NT+AF A+ +SK GG QL VPPG+W+T FNLTSH TL++ +
Sbjct: 78 LTDFGGVGDGVTLNTEAFERAVLAISKLGKKGGGQLNVPPGRWVTAPFNLTSHMTLFLAE 137
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
D+++L +DE WPL+PPLPSYG GR+ PG R+ SLI G NL DVV+TG N TINGQG+
Sbjct: 138 DSIILGIEDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQNLKDVVITGHNGTINGQGQT 197
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW KYR+K N TR L+++M+S ++ I+N+TL DSP W +HP NV I+ +TI AP+
Sbjct: 198 WWKKYRQKLLNHTRGPLVQIMWSSDILITNITLRDSPFWTLHPYDCKNVTIRNVTILAPV 257
Query: 239 -DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
++PNTDGI+PDSC + IED YI GDD +A+KSGWD+YGI P+ +++IR L+ S
Sbjct: 258 LEAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGIAYRRPSTNILIRNLVVRS 317
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
SA I++GSEMSGG+ ++ E++ +++ VRIKTA GRG YV+ I R +T ++
Sbjct: 318 MVSAGISIGSEMSGGVSNITVENLLVWSSRRAVRIKTAPGRGGYVRHITYRNLTFDNVRV 377
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
+ DY HPD G+DPKA+P + I++ + V ++ G P + +++
Sbjct: 378 GIVIKTDYNEHPDEGYDPKAVPVLRDISFTGVHGQGVRVPVRIHGSEEIPVRNVTFQDMS 437
Query: 418 IKLTEKPKELQWNCTNIQG-ITSRVTPQACELLPKKE 453
+ LT K K + + C +QG + + P CE L + +
Sbjct: 438 VGLTYKKKHI-FQCAFVQGRVIGTIFPAPCENLDRYD 473
>gi|115474399|ref|NP_001060796.1| Os08g0107300 [Oryza sativa Japonica Group]
gi|42408232|dbj|BAD09389.1| putative exo-poly-alpha-D-galacturonosidase precursor [Oryza sativa
Japonica Group]
gi|113622765|dbj|BAF22710.1| Os08g0107300 [Oryza sativa Japonica Group]
Length = 482
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/395 (47%), Positives = 257/395 (65%), Gaps = 2/395 (0%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R SA + +FG VGDG TSNT AF A++ L A GGA+L VPPG+W+TGSFNLTS F
Sbjct: 76 RAASASVEEFGAVGDGVTSNTAAFRRAVAALEARAGGGGARLEVPPGRWVTGSFNLTSRF 135
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL++H A++L SQD EWPL+ PLPSYGRGR+ G R SLI G L DVV+TG N TI
Sbjct: 136 TLFLHHGAIILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGEGLDDVVITGNNGTI 195
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW + + N TR +LIE++ S N+ ISN+TL +SP W VHPVY NV+I+ L
Sbjct: 196 DGQGRIWWDLWWNRTLNHTRGHLIELVDSTNIMISNITLRNSPFWTVHPVYCRNVVIRNL 255
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
T+ AP+++PNTDGI+PDS + IED YI SGDD VAVKSGWD+YGI VG P+ ++II+R
Sbjct: 256 TVLAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQR 315
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ +P + + GSEMSGGI +V D+ N+ VRIKT VGRG Y+ I + + M
Sbjct: 316 VSGTTPTCSGVGFGSEMSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRM 375
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+ +K + H D +D ALP ++ + RD+V ++ ++ L+ + + GIC
Sbjct: 376 EKVKVPIRFSRGADDHSDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGIC 435
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACE 447
NV+ LT ++ +W+C ++ G V P CE
Sbjct: 436 FRNVS--LTVIKRQDRWHCESVYGEAHDVLPAPCE 468
>gi|125559874|gb|EAZ05322.1| hypothetical protein OsI_27527 [Oryza sativa Indica Group]
Length = 482
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/395 (47%), Positives = 257/395 (65%), Gaps = 2/395 (0%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R SA + +FG VGDG TSNT AF A++ L A GGA+L VPPG+W+TGSFNLTS F
Sbjct: 76 RAASASVEEFGAVGDGVTSNTAAFRRAVAALEARAGGGGARLEVPPGRWVTGSFNLTSRF 135
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL++H A++L SQD EWPL+ PLPSYGRGR+ G R SLI G L DVV+TG N TI
Sbjct: 136 TLFLHHGAIILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGEGLDDVVITGNNGTI 195
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW + + N TR +LIE++ S N+ ISN+TL +SP W VHPVY NV+I+ L
Sbjct: 196 DGQGRIWWDLWWNRTLNHTRGHLIELVDSTNIMISNITLRNSPFWTVHPVYCRNVVIRNL 255
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
T+ AP+++PNTDGI+PDS + IED YI SGDD VAVKSGWD+YGI VG P+ ++II+R
Sbjct: 256 TVLAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQR 315
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ +P + + GSEMSGGI +V D+ N+ VRIKT VGRG Y+ I + + M
Sbjct: 316 VSGTTPTCSGVGFGSEMSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRM 375
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+ +K + H D +D ALP ++ + RD+V ++ ++ L+ + + GIC
Sbjct: 376 EKVKVPIRFSRGADDHSDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGIC 435
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACE 447
NV+ LT ++ +W+C ++ G V P CE
Sbjct: 436 FRNVS--LTVIKRQDRWHCESVYGEAHDVLPAPCE 468
>gi|125601928|gb|EAZ41253.1| hypothetical protein OsJ_25761 [Oryza sativa Japonica Group]
Length = 482
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/395 (47%), Positives = 257/395 (65%), Gaps = 2/395 (0%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R SA + +FG VGDG TSNT AF A++ L A GGA+L VPPG+W+TGSFNLTS F
Sbjct: 76 RAASASVEEFGAVGDGVTSNTAAFRRAVAALEARAGGGGARLEVPPGRWVTGSFNLTSRF 135
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL++H A++L SQD EWPL+ PLPSYGRGR+ G R SLI G L DVV+TG N TI
Sbjct: 136 TLFLHHGAIILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGEGLDDVVITGNNGTI 195
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW + + N TR +LIE++ S N+ ISN+TL +SP W VHPVY NV+I+ L
Sbjct: 196 DGQGRIWWDLWWNRTLNHTRGHLIELVDSTNIMISNITLRNSPFWTVHPVYCRNVVIRNL 255
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
T+ AP+++PNTDGI+PDS + IED YI SGDD VAVKSGWD+YGI VG P+ ++II+R
Sbjct: 256 TVLAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQR 315
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ +P + + GSEMSGGI +V D+ N+ VRIKT VGRG Y+ I + + M
Sbjct: 316 VSGTTPTCSGVGFGSEMSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRM 375
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+ +K + H D +D ALP ++ + RD+V ++ ++ L+ + + GIC
Sbjct: 376 EKVKVPIRFSRGADDHSDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGIC 435
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACE 447
NV+ LT ++ +W+C ++ G V P CE
Sbjct: 436 FRNVS--LTVIKRQDRWHCESVYGEAHDVLPAPCE 468
>gi|449452594|ref|XP_004144044.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/397 (47%), Positives = 263/397 (66%), Gaps = 3/397 (0%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
LTDFG VGDG T NTKAF AI +SK GG QL VP G+WLT FNLTSH TL++ +
Sbjct: 77 LTDFGAVGDGVTLNTKAFEKAILAISKLRTKGGGQLNVPAGRWLTAPFNLTSHLTLFLDE 136
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A++L QDE WPL+PPLPSYG GR+ G R+ SLI G NL DVV+TG N TI+GQG+
Sbjct: 137 GAVILGIQDEKYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRDVVITGHNGTISGQGKT 196
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW KYR+K N TR L+++M+S ++ ISN+TL DSP W +HP N+ I+ +TI AP+
Sbjct: 197 WWKKYRQKLLNHTRGPLVQIMWSRDILISNITLRDSPFWTLHPYDCKNITIRNVTILAPV 256
Query: 239 -DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
D+PNTDGI+PDSC + IED YI GDD +A+KSGWD+YGI G P++++ IR ++ S
Sbjct: 257 HDAPNTDGIDPDSCEDMLIEDCYISVGDDGIAIKSGWDQYGIAYGQPSKNIRIRNVVLQS 316
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
SA I++GSEMSGG+ + E++ N++ GVRIKTA GRG YV++I R +T+ T++
Sbjct: 317 MVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGYVQDITYRNLTLDTVRV 376
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
+ DY HPD G+DPKALP + I++ + V ++ G ++ P + +++
Sbjct: 377 GIVIKTDYNEHPDEGYDPKALPVLKDISFTSIHGQGVRVPVRMHGSKDIPVRNVTFKDMS 436
Query: 418 IKLTEKPKELQWNCTNIQG-ITSRVTPQACELLPKKE 453
+ +T K K + + C + G + + P C+ L + +
Sbjct: 437 VGITYKKKHI-FQCAFVHGRVIGTIFPAPCDNLDRYD 472
>gi|224068502|ref|XP_002326133.1| predicted protein [Populus trichocarpa]
gi|222833326|gb|EEE71803.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/397 (47%), Positives = 262/397 (65%), Gaps = 3/397 (0%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
LTDFG VGDG T NT+AF A+S +SK + GG QL VPPG+WLT FNLTSH TL++ +
Sbjct: 79 LTDFGAVGDGATVNTEAFERAVSAISKLSKRGGGQLNVPPGRWLTAPFNLTSHMTLFLAE 138
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A++L QDE WPL+P LPSYG GR+ PG R+ SLI G NL DVV+TG N TI+GQG+
Sbjct: 139 GAVILGIQDEKYWPLMPALPSYGYGREHPGPRYGSLIHGQNLRDVVITGHNGTIDGQGQT 198
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW KYR+K N TR L+++M+S ++ +N+TL DSP W +HP NV I+ +TI API
Sbjct: 199 WWKKYRQKLLNHTRGPLVQIMWSSDIVFTNITLRDSPFWTLHPYDCKNVTIRNVTILAPI 258
Query: 239 -DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
++PNTDGI+PDSC + IED YI GDD +A+KSGWD+YGI G P+ +++IR L+ S
Sbjct: 259 FEAPNTDGIDPDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSTNILIRNLVVRS 318
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
SA I++GSEMSGG+ +V E++ +++ VRIKTA GRG YV+ I R +T ++
Sbjct: 319 MVSAGISIGSEMSGGVSNVTVENVLVWSSRRAVRIKTAPGRGGYVRHITYRNLTFDNVRV 378
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
+ DY HPD G+DPKA+P + I++ + V ++ G + P + +++
Sbjct: 379 GIVIKTDYNEHPDEGYDPKAVPILGDISFTGIHGQGVRVPVRIHGSQEIPVRNVTFWDMS 438
Query: 418 IKLTEKPKELQWNCTNIQG-ITSRVTPQACELLPKKE 453
+ LT K K + + C +QG + V P CE L + +
Sbjct: 439 VGLTYKKKHI-FQCAFVQGRVIGTVFPAPCENLDRYD 474
>gi|356530447|ref|XP_003533792.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/391 (47%), Positives = 258/391 (65%), Gaps = 3/391 (0%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
LT+FGGVGDG T NT+AF + +SK GG QL VPPG+WLT FNLTSH TL++ +
Sbjct: 78 LTEFGGVGDGVTLNTEAFERGVGAISKLGDKGGGQLNVPPGRWLTAPFNLTSHMTLFLAR 137
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
D+++LA QDE WPL+P LPSYG GR+ PG R+SSLI G NL DVV+TG N TINGQG+
Sbjct: 138 DSVILAVQDEKYWPLMPALPSYGYGREHPGPRYSSLIHGQNLRDVVITGHNGTINGQGQT 197
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW KYR+K N TR L+++++S N+ ISN+TL DSP W +HP NV ++ +TI AP+
Sbjct: 198 WWTKYRQKLLNHTRGPLVQILWSSNIVISNITLRDSPFWTLHPYDCKNVTVKNVTILAPV 257
Query: 239 D-SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
+PNTDGI+PDSC + IED YI GDD +A+KSGWD+YGI G P+++++IR L+ S
Sbjct: 258 SHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGITYGRPSKNIVIRNLVVRS 317
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
SA I++GSEMSGG+ +V E+I ++ +RIKTA GRG YV++I + + K ++
Sbjct: 318 NVSAGISIGSEMSGGVSNVLVENILVWESRRAMRIKTAPGRGGYVRQITYKNLMFKNVRV 377
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
+ DY HP G+DP+ALP + I++ ++ V ++ G P + ++
Sbjct: 378 GIVIKTDYNEHPGTGYDPRALPILRDISFINIRGQGVRVPVRIQGSEQIPVRNVTFQDMK 437
Query: 418 IKLTEKPKELQWNCTNIQG-ITSRVTPQACE 447
I +T K K + + C +QG + P C+
Sbjct: 438 IGITYKKKHI-FQCAFVQGQAIGTIFPSPCD 467
>gi|449500524|ref|XP_004161121.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/397 (46%), Positives = 263/397 (66%), Gaps = 3/397 (0%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
LTDFG VGDG T NTKAF AI +SK GG QL VP G+WLT FNLTSH TL++ +
Sbjct: 77 LTDFGAVGDGVTLNTKAFEKAILAISKLRTKGGGQLNVPAGRWLTAPFNLTSHLTLFLDE 136
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A++L QDE WPL+PPLPSYG GR+ G R+ SLI G NL DVV+TG N TI+GQG+
Sbjct: 137 GAVILGIQDEKYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRDVVITGHNGTISGQGKT 196
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW KYR+K N TR L+++M+S ++ ISN+TL DSP W +HP N+ ++ +TI AP+
Sbjct: 197 WWKKYRQKLLNHTRGPLVQIMWSRDILISNITLRDSPFWTLHPYDCKNITVRNVTILAPV 256
Query: 239 -DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
D+PNTDGI+PDSC + IED YI GDD +A+KSGWD+YGI G P++++ IR ++ S
Sbjct: 257 HDAPNTDGIDPDSCEDMLIEDCYISVGDDGIAIKSGWDQYGIAYGQPSKNIRIRNVVLQS 316
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
SA I++GSEMSGG+ + E++ N++ GVRIKTA GRG YV++I R +T+ T++
Sbjct: 317 MVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGYVQDITYRNLTLDTVRV 376
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
+ DY HPD G+DPKALP + I++ + V ++ G ++ P + +++
Sbjct: 377 GIVIKTDYNEHPDEGYDPKALPVLKDISFTSIHGQGVRVPVRMHGSKDIPVRNVTFKDMS 436
Query: 418 IKLTEKPKELQWNCTNIQG-ITSRVTPQACELLPKKE 453
+ +T K K + + C + G + + P C+ L + +
Sbjct: 437 VGITYKKKHI-FQCAFVHGRVIGTIFPAPCDNLDRYD 472
>gi|212274809|ref|NP_001130359.1| uncharacterized protein LOC100191454 precursor [Zea mays]
gi|194688932|gb|ACF78550.1| unknown [Zea mays]
gi|413920257|gb|AFW60189.1| hypothetical protein ZEAMMB73_155387 [Zea mays]
Length = 458
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/397 (43%), Positives = 254/397 (63%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +T+FG VGDG+T NT F A+ + +A GGAQL VP G+WLTGSFNLTSH
Sbjct: 40 RPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTGSFNLTSHL 99
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TLY+ + A+++ ++D S+W ++ PLPSYG+G D PG R SLI G NLTDVV+TG N I
Sbjct: 100 TLYLEEGAVIVGAKDSSQWLIVEPLPSYGQGLDLPGPRHQSLISGYNLTDVVITGNNGVI 159
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW R + N +RP L+E ++S+++ ISNLT ++SP+W++HPVY SNV + +
Sbjct: 160 DGQGLVWWQWLRSHELNHSRPNLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNVKVHNV 219
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TI+ +D+P TDGI PDSC+N IED+ I + +++KSGWD YGI G PT + I R
Sbjct: 220 TIKTSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISR 279
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ +S AA+A GSEMSGGI D+ + ++ G+ KT+ GRG Y++++ + + M
Sbjct: 280 VDLLSSSGAALAFGSEMSGGISDIHVNHLRIHDSSKGISFKTSPGRGGYIEDVVISEVQM 339
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+ + TG+ +HPD FDP LP + + ++M N++ + L GI PFT IC
Sbjct: 340 ENVHVGIEFTGNCSTHPDDSFDPSDLPAIDHVTMKNMAGTNISVAGVLSGIEGAPFTAIC 399
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL 449
+SN+ + W+C+++ G + V P+ C L
Sbjct: 400 LSNLNFSMAAGSGPSSWSCSDVSGYSEAVFPEPCTEL 436
>gi|242061204|ref|XP_002451891.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
gi|241931722|gb|EES04867.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
Length = 448
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/398 (47%), Positives = 250/398 (62%), Gaps = 3/398 (0%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R + +TDFGGVGDG+T NT AF A+ + GG L VP G WLTGSFNLTSH
Sbjct: 41 RPEAISITDFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWLTGSFNLTSHM 100
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL++ + A+L A+QD WPL+ PLPSYGRGR+ PG R++S I G L DV +TG I
Sbjct: 101 TLFLARGAVLKATQDTRRWPLMEPLPSYGRGRELPGARYASFIHGNGLRDVAITGDKGVI 160
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQGE WW +R++ TRP L+E M S + ISN+ L +SP WN+HPVY NV++ +
Sbjct: 161 DGQGEVWWNMWRRRTLEHTRPNLVEFMHSTGIHISNIVLKNSPFWNIHPVYCDNVVVTNM 220
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
I AP DSPNTDGI+PDS +N IED+YI +GDD VA+KSGWDEYGI G P+ + IRR
Sbjct: 221 MILAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRR 280
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ SP S IA+GSE SGG++DV ED + ++ G+ IKT VGRG Y++ + V + M
Sbjct: 281 VRGSSPFS-GIAIGSEASGGVRDVLVEDCSIFDSGYGIHIKTNVGRGGYIRNVTVDNVRM 339
Query: 353 KTMKYV-FWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGI 411
++ + GD G HPD F A+P V + ++ NV L+GIR+ PFT I
Sbjct: 340 SGVRISGVRIAGDVGDHPDAHFSQLAVPLVDAVRISNVWGVNVQHPGSLEGIRSSPFTRI 399
Query: 412 CISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL 449
C+SNV + + + W C +++G V P C L
Sbjct: 400 CLSNVKL-FGWRKNDAAWRCRDVRGAALGVQPSPCAEL 436
>gi|357478841|ref|XP_003609706.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
gi|355510761|gb|AES91903.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
Length = 459
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/412 (45%), Positives = 257/412 (62%), Gaps = 3/412 (0%)
Query: 49 ALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNL 108
+L R HS + +FG VGDGKT NT AF AI L +A GGAQL VPPG WLT SFNL
Sbjct: 32 SLKPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGTWLTQSFNL 91
Query: 109 TSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGG 168
TSH TL++ K A+++ SQD W +L PLPSYGRG + PGGR+ SLI G L DVV+TG
Sbjct: 92 TSHLTLFLEKGAVIIGSQDHYNWDVLDPLPSYGRGLEVPGGRYQSLINGYMLQDVVITGN 151
Query: 169 NATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
N TI+G G WW + N +RP+L+E++ S +V +SNLT +++P++N+HPVY NV
Sbjct: 152 NGTIDGMGSTWWESFSSHSLNYSRPHLVELVASTDVVVSNLTFLNAPAYNIHPVYCRNVH 211
Query: 229 IQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHL 288
I ++I AP +SP T GI PDS + IED I +G D +A+KSGWDEYGI G PT+++
Sbjct: 212 IHNISIFAPPESPYTVGIVPDSSDHVCIEDCTIATGYDAIALKSGWDEYGIAYGRPTENV 271
Query: 289 IIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVR 348
IRR+ + + +A GS+MSGGI +V E + N++ G+ +T GRG Y+K+I +
Sbjct: 272 HIRRVHLQASYGSTLAFGSDMSGGISNVFVEHVHLYNSKGGIEFRTIRGRGGYMKDIILS 331
Query: 349 RMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPF 408
+ MK + TG GSHPD FDP ALP + ++D++ N+T + G++ PF
Sbjct: 332 DIEMKNIYRAISATGYCGSHPDDKFDPNALPLLDHFIFQDIIGTNITIAGSFAGLQESPF 391
Query: 409 TGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL--PKKEPTDCF 458
T IC+SN+T+ + W C+N+ G + V P C L P + C
Sbjct: 392 TNICLSNITLSVNYA-SSTSWECSNVSGFSDSVLPIPCPDLDSPSNYSSSCL 442
>gi|168005670|ref|XP_001755533.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693240|gb|EDQ79593.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 393
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/395 (46%), Positives = 253/395 (64%), Gaps = 3/395 (0%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +++FG VGDGKT NT AF A+ L YA GG QL +P G+WLTGS L SH
Sbjct: 1 RPHSVSISEFGAVGDGKTLNTHAFENAMFYLRTYADKGGVQLYIPAGRWLTGSIKLISHL 60
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGG-NAT 171
TL++ +A +L SQD ++P++P LPSYGRGR+ PG R SSLI G L DVV+TG N T
Sbjct: 61 TLFLENEATILGSQDLKDYPIIPGLPSYGRGRELPGPRHSSLINGEGLEDVVITGSDNGT 120
Query: 172 INGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQG 231
I+GQG WW + K + TR +L+E++ S ++ ISNLT DSP W +HPVY NV+++
Sbjct: 121 IDGQGAVWWDAFYNKTLDYTRGHLVELIDSSDILISNLTFRDSPFWTIHPVYCRNVVVKD 180
Query: 232 LTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIR 291
+TI AP+DSPNTDGI+PDS N IED YI G D +A+KSGWDEYG GMP++H+ +R
Sbjct: 181 MTILAPLDSPNTDGIDPDSSHNVCIEDCYISVGHDAIAIKSGWDEYGTSYGMPSKHIDVR 240
Query: 292 RLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMT 351
R+ S SA IA GSEMSGGI DV+ + + + G+R KT +GRG Y++ + V +
Sbjct: 241 RITVHSKTSAGIAFGSEMSGGISDVKVDHMMIFGARWGIRFKTGLGRGGYIRNVTVDNVD 300
Query: 352 MKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGI 411
M ++ TG+YG HPD ++ P + I+ ++V +N+T + G+ PF I
Sbjct: 301 MHSVGTAIAFTGNYGEHPDENWNRTDYPVIENISIENVVGENITHAGLFLGLPESPFHNI 360
Query: 412 CISNVTIKLTEKPKELQWNCTNIQGITSRVTPQAC 446
++N+ + + K + WNC+++ G V PQ C
Sbjct: 361 HLANIALDV--KSESDDWNCSSVAGTYFFVWPQPC 393
>gi|297745346|emb|CBI40426.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 173/246 (70%), Positives = 207/246 (84%)
Query: 34 AECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQ 93
ECR + +E+ A++CR HSA L DFGGVGDG+T NTKAF A+S LSKY ++GGAQ
Sbjct: 26 GECRKGRILEALEYSAISCRAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQ 85
Query: 94 LIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSS 153
L VP GKWLTGSF+LTSHFTL++H+DA+LLASQD S+WP++ PLPSYGRGRD GR++S
Sbjct: 86 LYVPAGKWLTGSFSLTSHFTLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTS 145
Query: 154 LIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLID 213
LIFGTNLTDV++TG N TI+GQG WW ++ + TRPYLIE+M+S ++QISNLTL++
Sbjct: 146 LIFGTNLTDVIITGDNGTIDGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLN 205
Query: 214 SPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSG 273
SPSWNVHPVYS N+LIQG+TI AP+ SPNTDGINPDSCTNTRIED YIVSGDDCVAVKSG
Sbjct: 206 SPSWNVHPVYSRNILIQGITILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 265
Query: 274 WDEYGI 279
WDEYGI
Sbjct: 266 WDEYGI 271
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 65/94 (69%), Gaps = 3/94 (3%)
Query: 389 MVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACEL 448
MVA+NV+ +A+L+GI +DPFTGICISNVTI L K K++ W CT+++GI+S VTP C
Sbjct: 283 MVAENVSMAARLEGIPSDPFTGICISNVTIHLAAKAKKVPWTCTDVEGISSGVTPTPCST 342
Query: 449 LPKKEPTD---CFFPDDKLPIDDVRLNTCSASIS 479
LP + P C FP + LPID V L CS I+
Sbjct: 343 LPDQGPEKTSLCNFPAESLPIDTVELQKCSYGIN 376
>gi|293332875|ref|NP_001170283.1| uncharacterized protein LOC100384246 precursor [Zea mays]
gi|224028521|gb|ACN33336.1| unknown [Zea mays]
gi|413925951|gb|AFW65883.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 451
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/391 (47%), Positives = 247/391 (63%), Gaps = 3/391 (0%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFGGVGDG+T NT AF A+ + GG L VP G WL GSFNLTSH TL++ +
Sbjct: 52 IADFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWLAGSFNLTSHMTLFLAR 111
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A+L A+QD WPL+ PLPSYGRGR+ PG R++S I G L DVV+TG I+GQGE
Sbjct: 112 GAVLKATQDTRGWPLVEPLPSYGRGRELPGPRYASFIHGDGLRDVVITGDRGVIDGQGEV 171
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW +R++ TRP L+E M S + ISN+ L +SP WN+HPVY NV++ + I AP
Sbjct: 172 WWNMWRRRTLEHTRPNLVEFMHSTGIHISNIVLKNSPFWNIHPVYCDNVVVTNMMILAPR 231
Query: 239 DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISP 298
DSPNTDG++PDS +N IED+YI +GDD VA+KSGWDEYGI G P+ + +RR+ SP
Sbjct: 232 DSPNTDGVDPDSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSAGVTVRRVRGSSP 291
Query: 299 DSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYV 358
S IA+GSE SGG++DV ED ++ G+ IKT VGRG Y++ + V + + ++
Sbjct: 292 FS-GIAIGSEASGGVRDVLVEDCAIFDSGYGIHIKTNVGRGGYIRNVTVDGVRLTGVRSG 350
Query: 359 FWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
+ GD G HPD F A+PTV + ++ NV Q L+GIR PFT IC+SNV
Sbjct: 351 VRIAGDVGDHPDAHFSQLAVPTVDAVRISNVWGVNVQQPGSLEGIRASPFTRICLSNV-- 408
Query: 419 KLTEKPKELQWNCTNIQGITSRVTPQACELL 449
KL + W C +++G V P C L
Sbjct: 409 KLFGWRSDAAWKCRDVRGAALGVQPSPCAEL 439
>gi|224075086|ref|XP_002304552.1| predicted protein [Populus trichocarpa]
gi|222841984|gb|EEE79531.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/409 (47%), Positives = 263/409 (64%), Gaps = 2/409 (0%)
Query: 50 LNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLT 109
+ R + DFGGVGDGKT NTKAF A+ + GG L +PPG +LT SFNLT
Sbjct: 1 MRLRNDKISIADFGGVGDGKTLNTKAFREAVYRIQHLRRRGGTLLYIPPGVYLTESFNLT 60
Query: 110 SHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGN 169
SH TLY+ + A++ A+QD WPL+ PLPSYGRGR+ GGR+ S I G L DV++TG N
Sbjct: 61 SHMTLYLARGAVIKATQDTGNWPLIAPLPSYGRGRERLGGRYMSFIHGDGLQDVIITGEN 120
Query: 170 ATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
TI+GQG+ WW +R++ TRP L+E + S + ISN+ +SP WN+HPVYS NV+I
Sbjct: 121 GTIDGQGDVWWNMWRQRTLLFTRPNLVEFVNSRGIIISNVIFRNSPFWNIHPVYSRNVVI 180
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
+ +TI AP+DSPNTDGI+PDS +N IED+YI +GDD VAVKSGWDEYGI G P+ +
Sbjct: 181 RYVTILAPLDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSDIT 240
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRR 349
IRR+ SP S IA+GSE SGG+K+V E++ N G+ IKT +GRG ++K I V
Sbjct: 241 IRRITGSSPFS-GIAVGSETSGGVKNVLVENVNLYNMGVGIHIKTNIGRGGFIKNITVTD 299
Query: 350 MTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFT 409
+ M+ ++ + GD G HPD F+P ALP V GI + + + V Q + G++N PFT
Sbjct: 300 VYMENVRKGIKIAGDVGDHPDDSFNPNALPVVYGITLKSIWGEKVQQPGSIQGLKNSPFT 359
Query: 410 GICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQAC-ELLPKKEPTDC 457
GIC+SN+ + P+ W C+++ G V+P C EL + C
Sbjct: 360 GICLSNINLHGVPGPRSSPWKCSDVSGSALLVSPWPCSELTSPHQTGSC 408
>gi|15229188|ref|NP_189881.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|7529266|emb|CAB86682.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|15215709|gb|AAK91400.1| AT3g42950/F18P9_110 [Arabidopsis thaliana]
gi|332644239|gb|AEE77760.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 484
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/400 (46%), Positives = 263/400 (65%), Gaps = 3/400 (0%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
LTDFG VGDG T NT+AF AI +SK A GG QL VPPG+WLT FNLTS+ TL++ +
Sbjct: 68 LTDFGAVGDGVTINTEAFEKAIYKISKLAKKGGGQLNVPPGRWLTAPFNLTSYMTLFLSE 127
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+A +LA QDE W LLPPLPSYG GR+ G R+ S I G NL DVVVTG N +INGQG+
Sbjct: 128 NAEILALQDEKYWSLLPPLPSYGYGREHHGPRYGSFIHGQNLRDVVVTGNNGSINGQGQT 187
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW KYR+K N TR L+++M+S ++ +N+TL DSP W +HP NV I +TI AP+
Sbjct: 188 WWKKYRQKLLNHTRGPLVQIMWSSDIVFANITLRDSPFWTLHPYDCKNVTITNMTILAPV 247
Query: 239 -DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
++PNTDGI+PDSC + IE++YI GDD +A+KSGWD+YG G P+++++IR LI S
Sbjct: 248 FEAPNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIRNLIIRS 307
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
SA I++GSEMSGG+ ++ E+I +++ GVRIKTA GRG YV++I R +T+ ++
Sbjct: 308 MVSAGISIGSEMSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELRV 367
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
+ DY HPD GF+P+A P + INY + V ++ G + P + +++
Sbjct: 368 GIVIKTDYNEHPDGGFNPQAFPILENINYTGIYGQGVRVPVRIQGSKEIPVKNVTFRDMS 427
Query: 418 IKLTEKPKELQWNCTNIQG-ITSRVTPQACELLPKKEPTD 456
+ +T K K + + C ++G + + P C+ L + + +
Sbjct: 428 VGITYKKKHI-FQCAYVEGRVIGTIFPAPCDNLDRYDEQE 466
>gi|242071887|ref|XP_002451220.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
gi|241937063|gb|EES10208.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
Length = 448
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/408 (44%), Positives = 262/408 (64%), Gaps = 2/408 (0%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +T+FG VGDG+T NT F A+ + +A GGAQL VP G+WLTGSFNLTSH
Sbjct: 30 RPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTGSFNLTSHL 89
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
T+Y+ + A+++ ++D S+WP++ PLPSYG+G D PG R SLI G NLTDVV+TG N I
Sbjct: 90 TIYLEQGAVIVGAKDSSQWPIVEPLPSYGQGTDLPGPRHRSLINGYNLTDVVITGNNGVI 149
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW + N +RP+L+E ++S+++ ISNLT ++SP+W++HPVY SNV + +
Sbjct: 150 DGQGLVWWQWLLSHELNHSRPHLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNVKVHNV 209
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TI +D+P TDGI PDSC+N IED+ I + +++KSGWD+YGI G PT + I R
Sbjct: 210 TIETSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDKYGISFGRPTSDIHISR 269
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ +S AA+A GSEMSGGI D+ + ++ G+ KT+ GRG Y++E+ + + M
Sbjct: 270 VDLLSSSGAALAFGSEMSGGISDIHVNHLRIHDSYKGISFKTSPGRGGYIEEVIISEVQM 329
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+ + TG+ +HPD FD LPT+ + ++MV N++ + L GI N PFT IC
Sbjct: 330 ENVHVGIEFTGNCSTHPDDSFDLSDLPTIDQVTMKNMVGTNISVAGVLSGIDNAPFTAIC 389
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL--PKKEPTDCF 458
+SN+ + W+C+N+ G + V P+ C L P P+ CF
Sbjct: 390 LSNLNFSMAADTGSSSWSCSNVSGYSEAVFPEPCTELRDPSSSPSICF 437
>gi|357151266|ref|XP_003575734.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 457
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/408 (44%), Positives = 256/408 (62%), Gaps = 2/408 (0%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +T+FG VG+G+T NT F A+ +A GGAQL VP G+WLTGSFNLTSH
Sbjct: 39 RPHSVTITEFGAVGNGRTLNTLPFQNAVFYARSFADKGGAQLYVPKGRWLTGSFNLTSHL 98
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL++ + A+++ +++ S+WP++ PLPSYG+G D PG R SLI G N+TDVV+TG N I
Sbjct: 99 TLFLEEGAVIIGAKESSQWPIVEPLPSYGQGLDLPGPRHLSLINGYNVTDVVITGNNGVI 158
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
NGQG WW + N +RP+L+E + S+ + ISNLT ++SP+W++HPVY S V + +
Sbjct: 159 NGQGSIWWDWLHSHELNHSRPHLVEFLHSEEIVISNLTFLNSPAWSIHPVYCSKVKVHNV 218
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TI+ D+P TDGI PDS +N IED+ I D +++KSGWD+YGI +G P + I R
Sbjct: 219 TIKTSSDAPLTDGIVPDSSSNVVIEDSTISVSHDAISIKSGWDKYGISIGKPASDIHISR 278
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ + AA+A GSEMSGGI D+ A++I + G+ KT GRG Y+ E+ + + M
Sbjct: 279 MDLQASSGAALAFGSEMSGGISDIHADNIQIHGSNKGISFKTTPGRGGYIDEVVISDVKM 338
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+ TG++ SHPD FDP LP + I +DMV N++ + L GI DPFT IC
Sbjct: 339 DDVIVAIEFTGNWSSHPDEDFDPSQLPVIGQITLKDMVGTNISVAGVLSGIDGDPFTAIC 398
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL--PKKEPTDCF 458
+SNV + E W+C+N+ G + V P+ C L P + CF
Sbjct: 399 LSNVNFLMAESAHSSSWSCSNVSGYSESVFPEPCSELHTPSSNSSMCF 446
>gi|242091535|ref|XP_002441600.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
gi|241946885|gb|EES20030.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
Length = 439
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/401 (46%), Positives = 252/401 (62%), Gaps = 5/401 (1%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKY-AADGGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
+ FG GDG+T NT AF A++ + + A GG L VPPG WLTG FNLTSH TL++
Sbjct: 40 VASFGARGDGQTLNTGAFARAVARIERRRGARGGTLLYVPPGVWLTGPFNLTSHMTLFLA 99
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
+ A++ A+QD S WPL+ PLPSYGRGR+ PGGR+ SLI G L DV +TG N TI+GQG
Sbjct: 100 RGAVIRATQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGNGLQDVFITGENGTIDGQGS 159
Query: 178 PWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAP 237
WW ++K+ TRP+L+E+M+S +V +SN+ DSP WN+HPVY SNV+I +T+ AP
Sbjct: 160 LWWDMWKKRTLPFTRPHLLELMYSTDVVVSNVVFQDSPFWNIHPVYCSNVVIANVTVLAP 219
Query: 238 IDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
DSPNTDGI+ DS +N IED+YI +GDD +++KSGWDEYGI G P+ + IRR+
Sbjct: 220 HDSPNTDGIDLDSSSNVCIEDSYISAGDDLISIKSGWDEYGIAFGRPSSGITIRRITGSG 279
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
P A A+GSE SGG+++V E + G+ IKT GRG +++ I V +T+ +Y
Sbjct: 280 P-FAGFAVGSETSGGVENVLVEHLNLFGMGVGIHIKTNSGRGGFIRNITVSEVTLNGARY 338
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
+ GD G HPD ++P LP V + ++++ N+ Q+ + GIRN F+ IC+SNV
Sbjct: 339 GLRIAGDVGGHPDASYNPSVLPVVNSVTIKNVLGQNIRQAGLIRGIRNSVFSNICLSNV- 397
Query: 418 IKLTEKPKELQWNCTNIQGITSRVTPQAC-ELLPKKEPTDC 457
KL W C + G V P C EL E C
Sbjct: 398 -KLYGSASIGPWKCRAVSGAALDVQPSPCTELASTSETGFC 437
>gi|23506093|gb|AAN28906.1| At3g42950/F18P9_110 [Arabidopsis thaliana]
Length = 484
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/400 (46%), Positives = 262/400 (65%), Gaps = 3/400 (0%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
LTDFG VGDG T NT+AF AI +SK A GG QL VPPG+WLT FNLTS+ TL++ +
Sbjct: 68 LTDFGAVGDGVTINTEAFEKAIYKISKLAKKGGGQLNVPPGRWLTAPFNLTSYMTLFLSE 127
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+A +LA QDE W LLPPLPSYG GR+ G R+ S I G NL DVVVTG N +INGQG+
Sbjct: 128 NAEILALQDEKYWSLLPPLPSYGYGREHHGPRYGSFIHGQNLRDVVVTGNNGSINGQGQT 187
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW KYR+K N TR L ++M+S ++ +N+TL DSP W +HP NV I +TI AP+
Sbjct: 188 WWKKYRQKLLNHTRGPLAQIMWSSDIVFANITLRDSPFWTLHPYDCKNVTITNMTILAPV 247
Query: 239 -DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
++PNTDGI+PDSC + IE++YI GDD +A+KSGWD+YG G P+++++IR LI S
Sbjct: 248 FEAPNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIRNLIIRS 307
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
SA I++GSEMSGG+ ++ E+I +++ GVRIKTA GRG YV++I R +T+ ++
Sbjct: 308 MVSAGISIGSEMSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELRV 367
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
+ DY HPD GF+P+A P + INY + V ++ G + P + +++
Sbjct: 368 GIVIKTDYNEHPDGGFNPQAFPILENINYTGIYGQGVRVPVRIQGSKEIPVKNVTFRDMS 427
Query: 418 IKLTEKPKELQWNCTNIQG-ITSRVTPQACELLPKKEPTD 456
+ +T K K + + C ++G + + P C+ L + + +
Sbjct: 428 VGITYKKKHI-FQCAYVEGRVIGTIFPAPCDNLDRYDEQE 466
>gi|168006626|ref|XP_001756010.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692940|gb|EDQ79295.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 423
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/406 (45%), Positives = 258/406 (63%), Gaps = 5/406 (1%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R +TDFG VGDGKT NTKAF A+ L A GAQL +P G+WLTGS NL SH
Sbjct: 19 RPKKVSITDFGAVGDGKTLNTKAFENALQYLHSNADSDGAQLTIPAGRWLTGSINLISHL 78
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL++ A +L S+D +++P++P LPSYGRGR+ PG R+SSLI G NL DV +TG N TI
Sbjct: 79 TLFLENGANILGSEDFNDYPIIPELPSYGRGRELPGARYSSLINGDNLEDVTITGENGTI 138
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW +R K + +R +++E++ S ++ I NLT +SPSW +HPVY NV+I+ L
Sbjct: 139 DGQGGVWWKAFRNKTLDYSRSHVLELIGSQDILIFNLTFQNSPSWTIHPVYCKNVVIKNL 198
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
T+ P DSPNTDGI+PDS + IED YI GDD +++KSGWD+YGI GMP++H+ IRR
Sbjct: 199 TVLNPNDSPNTDGIDPDSSQHVCIEDCYISVGDDAISIKSGWDQYGISYGMPSKHIQIRR 258
Query: 293 LICISPD---SAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRR 349
++ S A ++ GSEMSGGI +V+ +D+ + GVR KT+ GRG Y+K + V
Sbjct: 259 IVSASKTFGIHAGVSFGSEMSGGISNVKVDDMVLYGARWGVRFKTSPGRGGYIKHVAVHN 318
Query: 350 MTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFT 409
+ + ++K +YG HPD ++ A P + I +++V +N+TQ+ L G+ PF
Sbjct: 319 LLLHSVKTAVAFMANYGQHPDDNWNRTAYPVIENIVIKNIVGENITQAGILQGLPESPFR 378
Query: 410 GICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPT 455
I + TI L + + WNC+ + G V PQ C L ++ T
Sbjct: 379 HIHLK--TIALDVRSTKNVWNCSWVSGSYFFVVPQPCADLTRQNIT 422
>gi|388520257|gb|AFK48190.1| unknown [Lotus japonicus]
Length = 482
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/390 (46%), Positives = 257/390 (65%), Gaps = 3/390 (0%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
LTDFGGVGDG T NT AF A+S +SK GG QL VPPG WLT FNLTSH TL++ +
Sbjct: 66 LTDFGGVGDGVTLNTVAFERAVSAISKLREKGGGQLNVPPGLWLTAPFNLTSHMTLFLAQ 125
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
DA++L QDE WPL+P LPSYG GR+ PG R+ SLI G NL DVV+TG N TINGQG+
Sbjct: 126 DAVILGIQDEKYWPLMPALPSYGYGREHPGPRYGSLIHGQNLRDVVITGHNGTINGQGQS 185
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW KYR+K N TR L+++M+S ++ I+N+TL DSP W +HP NV I+ +TI AP+
Sbjct: 186 WWTKYREKLLNHTRGPLVQIMWSSDIVIANITLRDSPFWTLHPYDCKNVTIKNVTILAPV 245
Query: 239 -DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
+PNTDGI+PDSC + IED YI GDD +A+KSGWD+YGI G P++++IIR L+ S
Sbjct: 246 YHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGKPSKNIIIRNLVVRS 305
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
SA I++GSEMSGG+ +V E++ ++ +RIKTA GRG Y+++I R +T ++
Sbjct: 306 NVSAGISIGSEMSGGVSNVTVENVLVWESRRAIRIKTAPGRGGYMRQITYRNLTFNNVRV 365
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
+ +Y HPD G+DP A P ++ I++ ++ V +++G + + ++
Sbjct: 366 GIVIKTNYNEHPDAGYDPLAFPVLSDISFINVRGQGVRVPVRIEGSKEISVRNVTFQDMN 425
Query: 418 IKLTEKPKELQWNCTNIQG-ITSRVTPQAC 446
+ +T K K + + C ++G + + P C
Sbjct: 426 VGITYKKKHI-FQCAFVEGRVIGTIFPAPC 454
>gi|356503915|ref|XP_003520745.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 497
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/453 (42%), Positives = 268/453 (59%), Gaps = 14/453 (3%)
Query: 1 MEFCLKSRNNILHP-------HVIKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCR 53
M+ L N L P H+ +++ LL + + E N + A R
Sbjct: 1 MQLFLHWIQNFLAPLQFQLVAHMKSLVAVLLLVAI--STAVESNGEDNGGPCKQNAFKAR 58
Query: 54 KHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFT 113
HS + +FG VGDG T NT AF A+ L +A GGAQL VP GKWLTGSFNLTSH T
Sbjct: 59 PHSVSILEFGAVGDGITLNTVAFENAMFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLT 118
Query: 114 LYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATIN 173
L++ + A+++ASQD S W ++ LPSYGRG GR+ SLI+G NL+DVV+TG N TI+
Sbjct: 119 LFLERGAIIIASQDYSHWDIVDFLPSYGRGI----GRYRSLIYGQNLSDVVITGDNGTID 174
Query: 174 GQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLT 233
GQG WW + N +RP LIE + S ++ ISNLT +DSP+W +HPV+ SNV IQ +T
Sbjct: 175 GQGSIWWELFSSNSLNYSRPNLIEFVDSVDIIISNLTFLDSPAWGIHPVHCSNVQIQNIT 234
Query: 234 IRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRL 293
RAP + P T GI PDS IE++ I +G D V +KSGWD+YGI G PT + I +
Sbjct: 235 SRAPAEFPYTSGIVPDSSRYVCIENSNISTGHDAVVLKSGWDQYGIAYGKPTSSVHISNV 294
Query: 294 ICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMK 353
S A +A GSEMSGGI D+ AE + +N+ G+ +KT GRG Y++ I++ ++
Sbjct: 295 YLQSSSGAGLAFGSEMSGGISDIIAEKLHILNSPIGIELKTTKGRGGYMRGIFISDAELE 354
Query: 354 TMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICI 413
+ MTG G HPD +D ALP V I +++++ N++ + GI PF+ IC+
Sbjct: 355 NISLGISMTGYSGFHPDDKYDTSALPIVGDITFKNVIGANISVAGNFSGIVESPFSTICL 414
Query: 414 SNVTIKLTEKPKELQWNCTNIQGITSRVTPQAC 446
SNVT L+ +P W C+N+ G + V P+ C
Sbjct: 415 SNVTFSLSSEPSP-SWFCSNVIGFSEDVIPEPC 446
>gi|356570982|ref|XP_003553661.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 527
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/413 (45%), Positives = 255/413 (61%), Gaps = 8/413 (1%)
Query: 49 ALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNL 108
AL R HS + +FG VGDG T NT AF AI L +A GGAQL VP G WLTGSFNL
Sbjct: 99 ALKARPHSVSILEFGAVGDGITLNTVAFENAIFYLKSFADKGGAQLYVPSGTWLTGSFNL 158
Query: 109 TSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGG 168
T+H TL++ + A ++ASQD S W ++ LPSYGRG GR+ SLI+G NL+DVV+TG
Sbjct: 159 TNHLTLFLERGATIIASQDYSHWDIVDFLPSYGRGI----GRYRSLIYGQNLSDVVITGD 214
Query: 169 NATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
N TI+GQG WW + N TRP LIE + S +V ISNLT +DSP+W +HPVY SNV
Sbjct: 215 NGTIDGQGSIWWKLFNSNSLNYTRPNLIEFVDSVDVIISNLTFLDSPAWGIHPVYCSNVQ 274
Query: 229 IQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHL 288
IQ +T RAP + P T GI PDS N IE++ I +G D + +KSGWD+YGI G PT ++
Sbjct: 275 IQNITYRAPAEFPYTSGIVPDSSQNVCIENSNISTGHDAIVLKSGWDQYGIAYGKPTSNV 334
Query: 289 IIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVR 348
I + S A +A GSEMSGGI + AE + +N+ G+ +KT GRG Y++ I++
Sbjct: 335 HISNVYLQSSSGAGLAFGSEMSGGISVIIAEKLHILNSPIGIELKTTRGRGGYMRGIFIS 394
Query: 349 RMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPF 408
++ + MTG G HPD +D +LP V I +++++ N++ + GI PF
Sbjct: 395 DAELENISLGISMTGYSGFHPDDKYDTSSLPVVGDITFKNVIGANISVAGNFSGIVESPF 454
Query: 409 TGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLP---KKEPTDCF 458
+ IC+SNVT L+ +P W C+N+ G + V P+ C + K P CF
Sbjct: 455 STICLSNVTFSLSSEPSP-SWFCSNVIGFSEHVIPEPCPDIQSSYSKFPFSCF 506
>gi|356554060|ref|XP_003545367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 446
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/409 (47%), Positives = 264/409 (64%), Gaps = 1/409 (0%)
Query: 49 ALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNL 108
AL R + +T+FGGVGDG+T NTKAF AI + +GG L VPPG +LT FNL
Sbjct: 35 ALGHRTDNISITEFGGVGDGRTLNTKAFREAIYRVQHLPREGGTLLYVPPGVYLTEPFNL 94
Query: 109 TSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGG 168
TSH TLY+ A+++A+QD WPL+ PLPSYGRGR+ PGGR+ S I G + DVV+TG
Sbjct: 95 TSHMTLYLAAGAVIMATQDSLNWPLIAPLPSYGRGRERPGGRYMSFIHGDGVQDVVITGE 154
Query: 169 NATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
N TI+GQG+ WW K+R+ TRP L+E + S ++ ISN+ +SP WN+HPVY SNV+
Sbjct: 155 NGTIDGQGDAWWNKWRQGTLQFTRPNLVEFVNSRDIIISNVIFKNSPFWNIHPVYCSNVV 214
Query: 229 IQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHL 288
++ +TI AP DSPNTDGI+PDS +N IED+YI +GDD VAVKSGWDEYGI G P+ +
Sbjct: 215 VRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSDI 274
Query: 289 IIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVR 348
IRR+ SP A IA+GSE SGG+++V AE I N G+ IKT GRG ++K I +
Sbjct: 275 TIRRITGSSP-FAGIAIGSETSGGVENVLAEHINLYNMGIGIHIKTNTGRGGFIKNITMS 333
Query: 349 RMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPF 408
+ M+ + ++GD G HPD FD ALP V G+ +++ V Q+ + G+RN PF
Sbjct: 334 HVYMEEARKGIRISGDVGDHPDDKFDANALPLVKGVTIKNVWGMKVLQAGLIQGLRNSPF 393
Query: 409 TGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTDC 457
T IC+ ++ + P+ W C+++ G +V+P C L + C
Sbjct: 394 TDICLYDINLHGVTGPRTPPWKCSDVSGFAHQVSPWPCSELSSNQQGSC 442
>gi|22329119|ref|NP_195070.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|27754320|gb|AAO22613.1| putative polygalacturonase [Arabidopsis thaliana]
gi|28393881|gb|AAO42348.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332660825|gb|AEE86225.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 475
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/395 (50%), Positives = 270/395 (68%), Gaps = 3/395 (0%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+TDFGGVGDGKTSNT AF A+ +L +AA+GGAQL VP G WL+GSFNLTS+FTL++ +
Sbjct: 74 ITDFGGVGDGKTSNTAAFRRAVRHLEGFAAEGGAQLNVPEGTWLSGSFNLTSNFTLFLER 133
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
AL+L S+D EWP++ PLPSYGRGR+ PGGR SLI G NLT+VV+TG N TI+GQG+
Sbjct: 134 GALILGSKDLDEWPIIEPLPSYGRGRERPGGRHISLIHGDNLTNVVITGENGTIDGQGKM 193
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW + + TR +LIE+ S N+ ISNLTL++SP W +HPVY SNV+I+ +TI AP+
Sbjct: 194 WWELWWNRTLVHTRGHLIELKNSHNILISNLTLLNSPFWTIHPVYCSNVVIRNMTILAPM 253
Query: 239 DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISP 298
++PNTDGI+PDS TN IED YI SGDD VAVKSGWD+YG+ V P+ +++IRR+ +
Sbjct: 254 NAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVARPSSNIVIRRISGTTR 313
Query: 299 DSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYV 358
+ + +GSEMSGGI ++ EDI ++ +G+RIKT GRG Y+ I + ++ +K
Sbjct: 314 TCSGVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVKVP 373
Query: 359 FWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
+ H D +DPKALP V GI ++V+ N ++ L G+ F +C+ NVT
Sbjct: 374 IRFSSGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNVT- 432
Query: 419 KLTEKPKELQWNCTNIQGITSRVTPQAC-ELLPKK 452
L PK +W C ++ G S V P +C +LL KK
Sbjct: 433 -LLGLPKTEKWKCKDVSGYASDVFPLSCPQLLQKK 466
>gi|326524051|dbj|BAJ97036.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 482
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/403 (47%), Positives = 263/403 (65%), Gaps = 2/403 (0%)
Query: 47 FQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSF 106
++ R +A + +FG VGDG TSNT AF A++ L + GGA+L VP G+WLTGSF
Sbjct: 69 YRGAGRRAVTASVEEFGAVGDGVTSNTAAFQRAVAALEERGGGGGARLEVPAGRWLTGSF 128
Query: 107 NLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVT 166
NLTS FTL++H A++L SQD EWPL+ PLPSYGRGR+ G R SLI G +L DVV+T
Sbjct: 129 NLTSRFTLFLHHGAVILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGQDLNDVVIT 188
Query: 167 GGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSN 226
G N TI+GQG WW + + N TR +LIE++ S NV ISN+TL +SP W VHPVY N
Sbjct: 189 GSNGTIDGQGRMWWELWWNRTLNHTRGHLIELVNSTNVLISNVTLRNSPFWTVHPVYCRN 248
Query: 227 VLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQ 286
V+I+ LTI AP+++PNTDGI+PDS + IED YI SGDD VAVKSGWD+YGI VG P+
Sbjct: 249 VVIKDLTILAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSS 308
Query: 287 HLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIY 346
++II+R+ +P + + GSEMSGGI +V D+ N+ S VR+KT VGRG Y+ I
Sbjct: 309 NIIIQRVSGTTPTCSGVGFGSEMSGGISNVLVRDLHIWNSASAVRLKTDVGRGGYITNIT 368
Query: 347 VRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRND 406
+ +TM+ +K + H D +D ALP ++GI+ D+V +V ++ L+ +
Sbjct: 369 IANVTMEKVKVPIRFSRGSDDHSDDKYDRTALPMISGIHIVDIVGVDVQRAPMLEAVHGA 428
Query: 407 PFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL 449
+ GIC NV+++ ++++W C ++ G V P CE L
Sbjct: 429 VYEGICFRNVSLRAIR--RQVRWQCESVYGEAHEVFPAPCEEL 469
>gi|449459262|ref|XP_004147365.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 472
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/392 (48%), Positives = 266/392 (67%), Gaps = 4/392 (1%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+TDFGGVGDGKTSNT+AF AI + ++ GG++L VP G W+TGSFNLTS+FTL++ +
Sbjct: 72 ITDFGGVGDGKTSNTEAFRKAIQYMRRFGDKGGSKLTVPKGSWVTGSFNLTSNFTLFLQR 131
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
AL+LASQD EWP++ PLPSYGRGR+ GGR SLI G L++VV+TG N TI+GQG+
Sbjct: 132 GALILASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNALSNVVITGENGTIDGQGKM 191
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW + + N TR +L+E++ S N+ ISNLT +SP W +HPVY SNV+I+ +TI AP+
Sbjct: 192 WWELWWNRTLNHTRGHLVELINSHNILISNLTFKNSPFWTIHPVYCSNVVIKDMTILAPL 251
Query: 239 DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISP 298
++PNTDGI+PDS TN IED YI SGDD VAVKSGWD+YGI + P+ +++IRR+ +P
Sbjct: 252 NAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGINLARPSSNIVIRRVSGTTP 311
Query: 299 DSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYV 358
+ + +GSEMSGGI ++ ED+ ++ +G+RIK+ GRG Y+ + + M +K
Sbjct: 312 TCSGVGIGSEMSGGISNITIEDLNVWDSAAGIRIKSDQGRGGYIANVSITNFVMNRVKMA 371
Query: 359 FWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
+ HPD FDPKA+P V GI ++++ N T++ L GI + G+C+ NVTI
Sbjct: 372 IRFSRGSNDHPDEQFDPKAVPKVKGIFITNLMSLNSTKAPVLYGIAGTSYDGVCMKNVTI 431
Query: 419 -KLTEKPKELQWNCTNIQGITSRVTPQACELL 449
LT K W+C + G ++ V P C L
Sbjct: 432 LGLTPSAK---WHCAFVSGFSTSVFPTPCPQL 460
>gi|357464681|ref|XP_003602622.1| Germin-like protein [Medicago truncatula]
gi|355491670|gb|AES72873.1| Germin-like protein [Medicago truncatula]
Length = 775
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/406 (46%), Positives = 265/406 (65%), Gaps = 2/406 (0%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
RK + DFGGVGDGKTSNT++F AI + ++ GG+QL +P G WLTGSFNLTS F
Sbjct: 72 RKIIKSIVDFGGVGDGKTSNTQSFQRAIRYMQRFRGKGGSQLNIPNGTWLTGSFNLTSDF 131
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL++H A++L SQD EWP++ PLPSYGRGR+ GGR SLI + +VV+TG N T+
Sbjct: 132 TLFLHHGAVVLGSQDIKEWPIIEPLPSYGRGRERLGGRHISLIHANGVRNVVITGENGTV 191
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW + + TR +L+E+M S+NV +SNLT +SP W +HPVY SNV+I+G+
Sbjct: 192 DGQGRMWWELWWNRTLVHTRGHLLELMNSENVLVSNLTFRNSPFWTIHPVYCSNVVIKGM 251
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TI AP+++PNTDGI+PDS TN IEDNYI SGDD VA+KSGWD+YGI V P+ ++I+ R
Sbjct: 252 TILAPLNAPNTDGIDPDSSTNVCIEDNYIESGDDLVAIKSGWDQYGIAVAKPSTNIIVSR 311
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ +P + + +GSEMSGGI ++ E++ N+ +GVRIK+ GRG Y+K + + + M
Sbjct: 312 VSGTTPTCSGVGIGSEMSGGISNITIENLHVWNSAAGVRIKSDNGRGGYIKNVSISNIRM 371
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+ +K + HPD G+DPKA+P I ++++ N T++ L+G++ F G+C
Sbjct: 372 ERVKIPIRFSRGSNDHPDDGWDPKAVPRFKDILISNVISVNSTKAPVLEGVKGSSFEGLC 431
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTDCF 458
N+T W+C + G T+ V P C L + CF
Sbjct: 432 FKNIT--FLGVALSATWHCEYVAGFTNGVFPLPCPELQNNGTSSCF 475
>gi|147795580|emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis vinifera]
Length = 509
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/416 (45%), Positives = 261/416 (62%), Gaps = 19/416 (4%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
LTDFGGVGD T NT+AF AIS +SK GG QL VP G WLT FNLTSH TL++ +
Sbjct: 77 LTDFGGVGDXVTVNTEAFERAISAISKLGKKGGGQLNVPAGNWLTAPFNLTSHMTLFLDQ 136
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
DA++L QDE WPL+PPLPSYG GR+ G R+ SLI G NL DVVVTG N TINGQG+
Sbjct: 137 DAVILGIQDEKYWPLMPPLPSYGYGREHRGARYGSLIHGQNLKDVVVTGHNGTINGQGQT 196
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW KYR+K N TR L+++M+S ++ ISN+TL DSP W +HP NV I+ +TI API
Sbjct: 197 WWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPYDCKNVTIKNVTILAPI 256
Query: 239 -DSPNTDGIN----------------PDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKV 281
++PNTDGI+ P+SC + IED YI GDD +A+KSGWD+YG+
Sbjct: 257 FEAPNTDGIDPGKVTCTLYYFSDCICPNSCEDMVIEDCYISVGDDGIAIKSGWDQYGVAY 316
Query: 282 GMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAY 341
G P+ +++IR L+ S SA +++GSEMSGG+ +V E++ N++ VRIKT+ GRG Y
Sbjct: 317 GRPSVNILIRNLVIRSMVSAGVSIGSEMSGGVSNVTVENLLVWNSRRAVRIKTSPGRGGY 376
Query: 342 VKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLD 401
V+ I R +T ++ + DY HPD GFDPKALP + I++ + V ++
Sbjct: 377 VQHINYRNLTFDNVRVGIVIKTDYNEHPDDGFDPKALPILEDISFTGVHGQGVRVPVRIH 436
Query: 402 GIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQG-ITSRVTPQACELLPKKEPTD 456
G P + ++++ +T K K + + C ++G + V P CE L + + +
Sbjct: 437 GSEEIPVKKVTFRDMSVGITYKKKHI-FQCAYVEGRVIGTVFPAPCENLDRYDEQE 491
>gi|297802658|ref|XP_002869213.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315049|gb|EFH45472.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/395 (49%), Positives = 270/395 (68%), Gaps = 3/395 (0%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+TDFGGVGDGKTSNT+AF A+ +L +AA+GGAQL VP G WL+GSFNLTS+FTL++ +
Sbjct: 74 ITDFGGVGDGKTSNTEAFRRAVRHLEGFAAEGGAQLNVPMGTWLSGSFNLTSNFTLFLQR 133
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A++L S+D EWP++ PLPSYGRGR+ PGGR SLI G NLT+VV+TG N TI+GQG+
Sbjct: 134 GAVILGSKDLDEWPIVEPLPSYGRGRERPGGRHISLIHGDNLTNVVITGENGTIDGQGKM 193
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW + + TR +LIE+ N+ ISNLTL++SP W +HPVY SNV+I+ +TI API
Sbjct: 194 WWELWWNRTLVHTRGHLIELKNCHNILISNLTLLNSPFWTIHPVYCSNVVIRNMTILAPI 253
Query: 239 DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISP 298
++PNTDGI+PDS TN IED YI SGDD +AVKSGWD+YG+ V P+ +++IRR+ +
Sbjct: 254 NAPNTDGIDPDSSTNVCIEDCYIESGDDLIAVKSGWDQYGMAVARPSSNIVIRRISGTTR 313
Query: 299 DSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYV 358
+ + +GSEMSGGI ++ EDI ++ +G+RIKT GRG Y+ I + ++ +K
Sbjct: 314 TCSGVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVKVP 373
Query: 359 FWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
+ H D +DPKALP V GI ++V+ N ++ L G+ F +C+ NVT
Sbjct: 374 IRFSSGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNVT- 432
Query: 419 KLTEKPKELQWNCTNIQGITSRVTPQAC-ELLPKK 452
L P+ +W C ++ G S V P +C +LL KK
Sbjct: 433 -LLGLPQTEKWKCKDVSGYASDVFPLSCPQLLQKK 466
>gi|242077899|ref|XP_002443718.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
gi|241940068|gb|EES13213.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
Length = 497
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/399 (45%), Positives = 257/399 (64%), Gaps = 2/399 (0%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R +A + +FG VGDG T NT AF A++ L A GGA+L VPPG+WLTGSFNLTS F
Sbjct: 91 RAVTASVEEFGAVGDGATPNTAAFRRAVAELEARAGAGGARLEVPPGRWLTGSFNLTSRF 150
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL++H+ A++L SQD EWPL+ PLPSYGRGR+ G R SLI G L DVV+TG N TI
Sbjct: 151 TLFLHRGAVILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGEGLNDVVITGSNGTI 210
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW + + N TR +LIE++ S N+ IS++TL +SP W VHPVY SNV+++ L
Sbjct: 211 DGQGNMWWELWWNRTLNHTRGHLIELVNSTNILISSITLRNSPFWTVHPVYCSNVVMKDL 270
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TI AP+++PNTDGI+PDS + IED YI SGDD VAVKSGWD+YGI +G P+ +++I+R
Sbjct: 271 TILAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISLGKPSTNIVIQR 330
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ +P + + GSEMSGGI +V D+ N+ VR+KT VGRG Y+ I + +TM
Sbjct: 331 VSGTTPTCSGVGFGSEMSGGISNVLVRDLHVWNSAQAVRLKTDVGRGGYITNITISNVTM 390
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+ +K + H D +D ALP ++ + D+V ++ ++ L+ + + IC
Sbjct: 391 EKVKVPIRFSRGADDHSDDNYDRTALPRISNVLISDVVGVDLQRAPMLEAVPGAVYEEIC 450
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPK 451
N +++ ++ +W+C ++ G V P CE K
Sbjct: 451 FRNFSLRGIR--RQDRWHCESVYGEAHEVFPAPCEEFRK 487
>gi|226491354|ref|NP_001148255.1| polygalacturonase [Zea mays]
gi|195616976|gb|ACG30318.1| polygalacturonase [Zea mays]
gi|219888097|gb|ACL54423.1| unknown [Zea mays]
gi|413941563|gb|AFW74212.1| polygalacturonase [Zea mays]
Length = 493
Score = 370 bits (950), Expect = e-99, Method: Compositional matrix adjust.
Identities = 185/397 (46%), Positives = 256/397 (64%), Gaps = 1/397 (0%)
Query: 52 CRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQ-LIVPPGKWLTGSFNLTS 110
R+ A + +FG VGDG T NT AF A++ L A GG L VPPG+WLTGSFNLTS
Sbjct: 83 AREVWASVEEFGAVGDGATLNTAAFRRAVAELGARAVGGGGARLDVPPGRWLTGSFNLTS 142
Query: 111 HFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNA 170
FTL++H+ A++L SQD EWPL+ PLPSYGRGR+ G R SLI G L DVV+TG N
Sbjct: 143 RFTLFLHRGAVILGSQDPEEWPLITPLPSYGRGRERLGPRHISLIHGEGLNDVVITGSNG 202
Query: 171 TINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQ 230
TI+GQG WW +R + N TR +LIE++ S NV IS++TL +SP W VHPVY SNV+++
Sbjct: 203 TIDGQGHMWWELWRNRTLNHTRGHLIELVNSTNVLISSVTLSNSPFWTVHPVYCSNVVMK 262
Query: 231 GLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLII 290
LTI AP+D+PNTDGI+PDS + IED YI SGDD VAVKSGWD+YGI G P+ +++I
Sbjct: 263 DLTILAPLDAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISFGKPSTNIVI 322
Query: 291 RRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRM 350
+R+ +P + + GSEMSGGI +V D+ N+ VR+KT VGRG Y+ I + +
Sbjct: 323 QRVSGTTPTCSGVGFGSEMSGGISNVLVRDLHVWNSAQAVRLKTDVGRGGYITNITIASV 382
Query: 351 TMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTG 410
M+ +K + HPD +DP ALP ++ + D+V ++ ++ L+ + + G
Sbjct: 383 AMEKVKVPIRFSRGADDHPDDRYDPAALPRISNVLVSDVVGVHLQRAPMLEAVPGAVYEG 442
Query: 411 ICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACE 447
IC N + + + ++ +W+C ++ G V P CE
Sbjct: 443 ICFRNFSFRGIRRQQDSRWHCESVYGEAHDVFPAPCE 479
>gi|356516364|ref|XP_003526865.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 477
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 188/403 (46%), Positives = 267/403 (66%), Gaps = 2/403 (0%)
Query: 47 FQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSF 106
F+ + RK + DFGGVGDGKTSNT++F AI + ++ GGAQL +P G WLTGSF
Sbjct: 65 FRDVPPRKVVLSIEDFGGVGDGKTSNTESFRRAIRYMQRFQNRGGAQLNIPTGTWLTGSF 124
Query: 107 NLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVT 166
NLTS+FTL++H A++LASQD EWP++ PLPSYGRGR+ GGR SLI G +++VV+T
Sbjct: 125 NLTSNFTLFLHHGAVILASQDPKEWPIIEPLPSYGRGRERLGGRHISLIHGNGISNVVIT 184
Query: 167 GGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSN 226
G N T++GQG WW + + TR +L+E++ SDNV ISNLT +SP W +HPVY SN
Sbjct: 185 GQNGTVDGQGRMWWELWWNRTLEHTRGHLLELISSDNVLISNLTFRNSPFWTIHPVYCSN 244
Query: 227 VLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQ 286
V+++G+TI AP+++PNTDGI+PDS TN IEDNYI SGDD VA+KSGWD YGI + P+
Sbjct: 245 VVVKGMTILAPLNAPNTDGIDPDSSTNVCIEDNYIESGDDLVAIKSGWDHYGITMAHPST 304
Query: 287 HLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIY 346
++I+RR+ +P + + +GSEMSGGI ++ E++ ++ +GVRIK+ GRG Y+ +
Sbjct: 305 NIIVRRISGTTPTCSGVGIGSEMSGGISNITIENLHVWDSAAGVRIKSDKGRGGYITNVS 364
Query: 347 VRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRND 406
+ + M+ +K + HPD G+DPKA+P I ++V+ N T++ L+G+
Sbjct: 365 ISDIRMERVKIPIRFSRGSNDHPDDGWDPKAVPRFKDILISNVVSVNSTKAPVLEGVEGS 424
Query: 407 PFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL 449
F G+C N+T L +W C + G + V P C L
Sbjct: 425 SFEGLCFKNIT--LHGVALSARWRCEYVSGFATEVFPVPCPEL 465
>gi|224083446|ref|XP_002307030.1| predicted protein [Populus trichocarpa]
gi|222856479|gb|EEE94026.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 189/392 (48%), Positives = 267/392 (68%), Gaps = 4/392 (1%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFGGVGDGKTSNT+AF A+ + + GGAQL VP G+W+TGSFNLTS+FTL++ +
Sbjct: 3 IKDFGGVGDGKTSNTEAFRRAMRYVQGFGERGGAQLNVPEGRWVTGSFNLTSNFTLFLEE 62
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A++L SQD EWP++ PLPSYGRGR+ GGR SLI G L +VV+TG N TI+GQG+
Sbjct: 63 GAVILGSQDPKEWPIIEPLPSYGRGRERLGGRHISLIHGDGLANVVITGNNGTIDGQGKM 122
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW + + TR +L+E+M S ++ ISNLT +SP W +HP+Y SN++++ +TI AP+
Sbjct: 123 WWELWWNRTLEHTRGHLVELMNSQDILISNLTFRNSPFWTIHPIYCSNLVVKDMTILAPL 182
Query: 239 DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISP 298
++PNTDGI+PDS TN IED YI SGDD VAVKSGWD+YGIK+ P+ ++IIRR+ +P
Sbjct: 183 NAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKMARPSSNIIIRRVSGTTP 242
Query: 299 DSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYV 358
+ + +GSEMSGGI +V ED+ ++ +GVRIKT GRG Y+ I + +TM+ +K
Sbjct: 243 TCSGVGIGSEMSGGIFNVTIEDLHVWDSAAGVRIKTDKGRGGYIANITISDITMERVKIP 302
Query: 359 FWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT- 417
+ HPD +DPKA+P V G++ ++V+ N T++ L+GI + PF GIC+ N++
Sbjct: 303 IRFSSGSNDHPDERWDPKAVPVVKGVSITNLVSFNSTKAPVLEGIEDAPFGGICMKNISL 362
Query: 418 IKLTEKPKELQWNCTNIQGITSRVTPQACELL 449
+ + P W C + G + V P C L
Sbjct: 363 LGVVSSP---SWRCEFVSGFANDVFPTPCPQL 391
>gi|297792177|ref|XP_002863973.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
gi|297309808|gb|EFH40232.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
Length = 447
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 182/398 (45%), Positives = 248/398 (62%), Gaps = 3/398 (0%)
Query: 51 NCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTS 110
N R HS +TDFG VGDG+T NT AF A+ L +A GGAQL VPPG+WLTGSFNLTS
Sbjct: 35 NERPHSVKITDFGAVGDGETLNTLAFQNAVFYLKSFADKGGAQLYVPPGRWLTGSFNLTS 94
Query: 111 HFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNA 170
H TL++ KDA++LASQD S W + LPSYGRG D PG R+ SLI G L DVVVTG N
Sbjct: 95 HLTLFLEKDAVILASQDPSHWQVADALPSYGRGIDLPGKRYMSLINGDTLHDVVVTGDNG 154
Query: 171 TINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQ 230
TI+GQG WW ++ +RP+L+E + S NV +SNLT +++P++ +H VY SN+ I
Sbjct: 155 TIDGQGLVWWDRFNSHSLEYSRPHLVEFVSSGNVIVSNLTFLNAPAYTIHSVYCSNLYIH 214
Query: 231 GLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLII 290
+T +SP T GI PDS N I+D+ I G D +++KSGWDEYGI PT ++ I
Sbjct: 215 RVTANTSPESPYTIGIVPDSSENVCIQDSSINMGYDAISLKSGWDEYGISYARPTANVQI 274
Query: 291 RRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRM 350
+ + + ++I+ GSEMSGGI DV D N+ SG+ +T GRG Y+KEI + +
Sbjct: 275 KNVYLGAASGSSISFGSEMSGGISDVEVRDAHIHNSLSGISFRTTNGRGGYIKEIDISNI 334
Query: 351 TMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTG 410
M + F G +G+HPD GFD A P V+ I D+ +N++ + G PFT
Sbjct: 335 HMVNVGTAFLANGSFGTHPDSGFDANAFPLVSHIRLHDIAGENISTAGYFFGTEESPFTS 394
Query: 411 ICISNV--TIKLTEKPKELQWNCTNIQGITSRVTPQAC 446
I +SN+ +IK ++ P + W C+ + G + V P+ C
Sbjct: 395 ILLSNISLSIKNSDSPADF-WQCSYVDGSSEFVVPEPC 431
>gi|357135554|ref|XP_003569374.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 448
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 186/397 (46%), Positives = 254/397 (63%), Gaps = 3/397 (0%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R + FGG GDG+T NT AF A++++ + A GG L VPPG WLTG FNLTSH
Sbjct: 42 RGEWVSVASFGGAGDGRTLNTAAFAAAVASIERRRAPGGGLLYVPPGVWLTGPFNLTSHM 101
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL++ + A++ A+QD S WPL+ PLPSYGRGR+ PG R+ SLI G L DV +TG N TI
Sbjct: 102 TLFLSRGAVIRATQDTSSWPLIDPLPSYGRGREMPGKRYKSLIHGNGLQDVFITGANGTI 161
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW ++K TRP+L+E+M S +V +SNL DSP WN+HPVY SNV+I+ L
Sbjct: 162 DGQGSVWWDMWKKGTLPFTRPHLLELMDSSDVIVSNLVFRDSPFWNIHPVYCSNVVIRNL 221
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TI AP DSPNTDGI+PDS +N IED YI +GDD VA+KSGWDEYGI G P+ + +RR
Sbjct: 222 TILAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLVAIKSGWDEYGIAYGRPSSDITVRR 281
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ SP A A+GSE SGG+++V AE + ++ GV IKT GRG +++ + V +T+
Sbjct: 282 ITGSSP-FAGFAVGSETSGGVENVLAEHLNFFSSGFGVHIKTNSGRGGFIRNVTVSDVTL 340
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
++Y + GD G HPD ++ ALP V + +++ N+ ++ + GI + F+ IC
Sbjct: 341 DNVRYGLRIAGDVGDHPDEHYNHNALPKVDSLTIKNVQGQNIKEAGSIKGIASSAFSRIC 400
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL 449
+SN IKL W C ++ G + P C L
Sbjct: 401 LSN--IKLHGSVPVRPWKCESVSGGALDLQPSPCTEL 435
>gi|449452247|ref|XP_004143871.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
gi|449501789|ref|XP_004161459.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 445
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 190/400 (47%), Positives = 260/400 (65%), Gaps = 1/400 (0%)
Query: 50 LNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLT 109
+ R + DFGG+GDG+T NT+AF AI + GG L +PPG +LT +FNLT
Sbjct: 34 MKYRNDKISIADFGGIGDGRTLNTRAFRAAIYRIQHLRRRGGTLLYIPPGVYLTETFNLT 93
Query: 110 SHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGN 169
SH TLY+ K A++ A QD S WP++ PLPSYGRGR+ PGGR+ SLI G + DVV+TG N
Sbjct: 94 SHMTLYLAKGAVIKAVQDSSNWPVIAPLPSYGRGRERPGGRYISLIHGDGVHDVVITGEN 153
Query: 170 ATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
TI+GQG+ WW +R TRP L+E + S N+ ISN+ ++SP WN+HPVY NV++
Sbjct: 154 GTIDGQGDAWWNMWRTGTLKYTRPSLVEFVNSYNIIISNVMFLNSPFWNIHPVYCRNVVV 213
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
+ +TI AP DSPNTDG++PDS N IED+YI +GDD VAVKSGWDEYGI G + +
Sbjct: 214 RYVTILAPRDSPNTDGVDPDSSNNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRCSYDIT 273
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRR 349
IRR+ SP A +A+GSE SGG+ +V AE + + G+ IKT +GRG ++K I V
Sbjct: 274 IRRISGSSP-FAGVAVGSEASGGVANVLAEHLNFYDMGVGINIKTNIGRGGFIKNITVSN 332
Query: 350 MTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFT 409
+ M+ + + GD G HPD FDP ALP V I +++ NV Q+ + G+R+ PFT
Sbjct: 333 VYMENSRKGLKIAGDAGDHPDDKFDPNALPIVKDITIKNIWGVNVQQAGSIYGLRDSPFT 392
Query: 410 GICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL 449
GIC+SN+ ++ +P+ + W C+ + G S V+P C L
Sbjct: 393 GICLSNINLRGATRPRSVPWTCSYVSGAASLVSPWPCSEL 432
>gi|225431447|ref|XP_002274138.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 488
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 194/400 (48%), Positives = 269/400 (67%), Gaps = 2/400 (0%)
Query: 47 FQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSF 106
F+ + RK + DFGGVGDG TSNT+ F AI + + GG+QL VP G+W+TGSF
Sbjct: 67 FREVPPRKVVMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSF 126
Query: 107 NLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVT 166
NLTS+FTL++ + A++L SQD +WP++ PLPSYGRGR+ GGR SLI G L +VV+T
Sbjct: 127 NLTSNFTLFLEEGAVILGSQDLEDWPIIEPLPSYGRGRERLGGRHISLIHGDALANVVIT 186
Query: 167 GGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSN 226
G N TI+GQG+ WW + + TR +L+E+ S N+ ISNLT ++SP W +HPVY SN
Sbjct: 187 GQNGTIDGQGKMWWELWWNRTLEHTRGHLLEIKNSHNILISNLTFMNSPFWTIHPVYCSN 246
Query: 227 VLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQ 286
V+I+ +TI AP+++PNTDGI+PDS TN IED YI SGDD VAVKSGWD+YGI + P+
Sbjct: 247 VVIKDVTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSS 306
Query: 287 HLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIY 346
++I+RRL +P + + +GSEMSGGI +V ED+ ++ +GVRIKT GRG YV I
Sbjct: 307 NIIVRRLSGTTPTCSGVGIGSEMSGGISNVTMEDLHIWDSAAGVRIKTDKGRGGYVVNIT 366
Query: 347 VRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRND 406
+ + M+ +K + HPD G+DPKA+P + GI ++V+ N T++ L+GI
Sbjct: 367 INNIRMERVKVPIRFSRGSNDHPDDGWDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGA 426
Query: 407 PFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQAC 446
P+ GIC+ NVT+ L P +W+C + G T V P +C
Sbjct: 427 PYEGICMKNVTL-LGLAPAA-KWHCEFVSGFTDAVFPVSC 464
>gi|296088539|emb|CBI37530.3| unnamed protein product [Vitis vinifera]
Length = 528
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 194/400 (48%), Positives = 269/400 (67%), Gaps = 2/400 (0%)
Query: 47 FQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSF 106
F+ + RK + DFGGVGDG TSNT+ F AI + + GG+QL VP G+W+TGSF
Sbjct: 67 FREVPPRKVVMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSF 126
Query: 107 NLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVT 166
NLTS+FTL++ + A++L SQD +WP++ PLPSYGRGR+ GGR SLI G L +VV+T
Sbjct: 127 NLTSNFTLFLEEGAVILGSQDLEDWPIIEPLPSYGRGRERLGGRHISLIHGDALANVVIT 186
Query: 167 GGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSN 226
G N TI+GQG+ WW + + TR +L+E+ S N+ ISNLT ++SP W +HPVY SN
Sbjct: 187 GQNGTIDGQGKMWWELWWNRTLEHTRGHLLEIKNSHNILISNLTFMNSPFWTIHPVYCSN 246
Query: 227 VLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQ 286
V+I+ +TI AP+++PNTDGI+PDS TN IED YI SGDD VAVKSGWD+YGI + P+
Sbjct: 247 VVIKDVTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSS 306
Query: 287 HLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIY 346
++I+RRL +P + + +GSEMSGGI +V ED+ ++ +GVRIKT GRG YV I
Sbjct: 307 NIIVRRLSGTTPTCSGVGIGSEMSGGISNVTMEDLHIWDSAAGVRIKTDKGRGGYVVNIT 366
Query: 347 VRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRND 406
+ + M+ +K + HPD G+DPKA+P + GI ++V+ N T++ L+GI
Sbjct: 367 INNIRMERVKVPIRFSRGSNDHPDDGWDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGA 426
Query: 407 PFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQAC 446
P+ GIC+ NVT+ L P +W+C + G T V P +C
Sbjct: 427 PYEGICMKNVTL-LGLAPAA-KWHCEFVSGFTDAVFPVSC 464
>gi|15238207|ref|NP_199002.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|10177371|dbj|BAB10662.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|50897172|gb|AAT85725.1| At5g41870 [Arabidopsis thaliana]
gi|332007355|gb|AED94738.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 190/401 (47%), Positives = 258/401 (64%), Gaps = 4/401 (0%)
Query: 50 LNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNL-SKYAADGGAQLIVPPGKWLTGSFNL 108
+ R ++DFG VGDGKT NTKAFN+AI + + ++ G L VP G +LT SFNL
Sbjct: 38 MKHRNEMLSISDFGAVGDGKTLNTKAFNSAIDRIRNSNNSNEGTLLYVPRGVYLTQSFNL 97
Query: 109 TSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGG 168
TSH TLY+ A++ A QD +WPL PLPSYGRGR+ PG R+ S I G L DVV+TG
Sbjct: 98 TSHMTLYLADGAVIKAVQDTEKWPLTDPLPSYGRGREHPGRRYISFIHGDGLNDVVITGR 157
Query: 169 NATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
N TI+GQGEPWW +R TRP LIE S N+ +S++ L +SP W +HPVY SNV+
Sbjct: 158 NGTIDGQGEPWWNMWRHGTLKFTRPGLIEFNNSTNILVSHVVLQNSPFWTLHPVYCSNVV 217
Query: 229 IQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHL 288
+ +TI AP DS NTDGI+PDS +N IED+YI +GDD VAVKSGWDEYGI P++ +
Sbjct: 218 VHHVTILAPTDSYNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYNRPSRDI 277
Query: 289 IIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVR 348
IRR+ SP A IA+GSE SGGI++V E+IT N+ G+ IKT +GRG ++ I +
Sbjct: 278 TIRRITGSSP-FAGIAIGSETSGGIQNVTVENITLYNSGIGIHIKTNIGRGGSIQGITIS 336
Query: 349 RMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPF 408
+ ++ ++ ++GD G HPD F+ ALP V GI +++ V ++ + G+++ PF
Sbjct: 337 GVYLEKVRTGIKISGDTGDHPDDKFNTSALPIVRGITIKNVWGIKVERAGMVQGLKDSPF 396
Query: 409 TGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL 449
T +C SNVT LT + W C+++ G +V P C L
Sbjct: 397 TNLCFSNVT--LTGTKRSPIWKCSDVVGAADKVNPTPCPEL 435
>gi|147776708|emb|CAN76963.1| hypothetical protein VITISV_043959 [Vitis vinifera]
Length = 479
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 195/409 (47%), Positives = 271/409 (66%), Gaps = 2/409 (0%)
Query: 47 FQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSF 106
F+ + RK + DFGGVGDG TSNT+ F AI + + GG+QL VP G+W+TGSF
Sbjct: 56 FREVPPRKVVMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSF 115
Query: 107 NLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVT 166
NLTS+FTL++ + A++L SQD +WP++ PLPSYGRGR+ GGR SLI G L +VV+T
Sbjct: 116 NLTSNFTLFLEEGAVILGSQDLEDWPIIEPLPSYGRGRERLGGRHISLIHGDALANVVIT 175
Query: 167 GGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSN 226
G N TI+GQG+ WW + + TR +L+E+ S N+ ISNLT ++SP W +HPVY SN
Sbjct: 176 GQNGTIDGQGKMWWELWWNRTLEHTRGHLLEIKNSHNILISNLTFMNSPFWTIHPVYCSN 235
Query: 227 VLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQ 286
V+I+ +TI AP+++PNTDGI+PDS TN IED YI SGDD VAVKSGWD+YGI + P+
Sbjct: 236 VVIKDVTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSS 295
Query: 287 HLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIY 346
++I+RRL +P + + +GSEMSGGI +V ED+ ++ +GVRIKT GRG YV I
Sbjct: 296 NIIVRRLSGTTPTCSGVGIGSEMSGGISNVTMEDLHIWDSAAGVRIKTDKGRGGYVVNIT 355
Query: 347 VRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRND 406
+ + M+ +K + HPD +DPKA+P + GI ++V+ N T++ L+GI
Sbjct: 356 INNIRMERVKVPIRFSRGSNDHPDDXWDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGA 415
Query: 407 PFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPT 455
P+ GIC+ NVT+ L P +W+C + G T V P +C + E T
Sbjct: 416 PYEGICMKNVTL-LGLAPAA-KWHCEFVSGFTDAVFPVSCPQMQSNEAT 462
>gi|297830296|ref|XP_002883030.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
gi|297328870|gb|EFH59289.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
Length = 452
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 189/419 (45%), Positives = 251/419 (59%), Gaps = 5/419 (1%)
Query: 40 KNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPG 99
N+ E L+ R HS + +FG VGDGKT NT AF AI L +A GGAQL VPPG
Sbjct: 21 NNAICKEIFKLDPRPHSVSILEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPPG 80
Query: 100 KWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTN 159
KWLTGSFNLTSH TL++ K A +LAS D S W ++ PLPSYGRG + PG R+ SLI G N
Sbjct: 81 KWLTGSFNLTSHLTLFLEKGATILASPDPSHWDVVSPLPSYGRGIELPGKRYRSLINGDN 140
Query: 160 LTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNV 219
L DVV+TG N T +GQG WW N +RP++IE + S ++ ISNLT +++PS N+
Sbjct: 141 LIDVVITGENGTFDGQGAAWWEWLETGSLNYSRPHIIEFVSSKHILISNLTFLNAPSINI 200
Query: 220 HPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGI 279
HPVY S + I+ + I +DSP G+ PDS N IED+ I G D V++KSGWD+YGI
Sbjct: 201 HPVYCSQIHIRKVLIETSVDSPYVLGVAPDSSDNVCIEDSTINVGHDAVSLKSGWDQYGI 260
Query: 280 KVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG 339
G PT + IR L SP A I+ GSEMSGGI DV E + ++ GV +T GRG
Sbjct: 261 HYGRPTTAVYIRNLSLKSPTGAGISFGSEMSGGISDVTVERLNIQSSHVGVAFRTTRGRG 320
Query: 340 AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAK 399
Y++ I + + + ++ G GSHPD FD ALP VT I R+ ++ +
Sbjct: 321 GYIRNITISDVDLTSVDTAIVANGHTGSHPDDKFDWDALPVVTHIVLRNFTGVDIGLAGN 380
Query: 400 LDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTDCF 458
L GI PFT IC++++ + W C+N+ G + V+P+ C+ L P+ CF
Sbjct: 381 LTGIGESPFTSICLTDIHLHTHSD----SWICSNVSGFSDDVSPEPCQEL-MSSPSSCF 434
>gi|48475087|gb|AAT44156.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 474
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 188/426 (44%), Positives = 254/426 (59%), Gaps = 30/426 (7%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ FGGVGDG+ NT AF A++ + + A GGA L VP G WLTG FNLTSH TL++ +
Sbjct: 50 VASFGGVGDGRALNTAAFARAVARIERRRARGGALLYVPAGVWLTGPFNLTSHMTLFLAR 109
Query: 119 DALLLASQ--------------------------DESEWPLLPPLPSYGRGRDEPGGRFS 152
A++ A+Q D S WPL+ PLPSYGRGR+ PGGR+
Sbjct: 110 GAVIRATQAIAMAMSFFYLQDLSSSSCRAFVLDQDTSSWPLIDPLPSYGRGRELPGGRYM 169
Query: 153 SLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLI 212
SLI G L DV +TG N TI+GQG WW +RK+ TRP+L+E++ S +V ISN+
Sbjct: 170 SLIHGDGLQDVFITGENGTIDGQGSVWWDMWRKRTLPFTRPHLLELISSTDVIISNVVFQ 229
Query: 213 DSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKS 272
DSP WN+HPVY SNV+I +T+ AP DSPNTDGI+PDS +N IED+YI +GDD +++KS
Sbjct: 230 DSPFWNIHPVYCSNVVITNVTVLAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLISIKS 289
Query: 273 GWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRI 332
GWDEYGI G P+ + IRR+ P A A+GSE SGG+++V E + G+ +
Sbjct: 290 GWDEYGIAFGRPSSGITIRRITGSGP-FAGFAVGSETSGGVENVHVEHLNFFGMGVGIHV 348
Query: 333 KTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVAD 392
KT GRG +++ I V +T+ +Y + GD G HPD +DP LP V G+ +++
Sbjct: 349 KTNSGRGGFIRNITVSEVTLNGARYGLRIAGDVGGHPDASYDPSKLPVVDGVTIKNVWGQ 408
Query: 393 NVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQAC-ELLPK 451
N+ Q+ + GIR+ F+ IC+SNV KL W C + G V P C EL
Sbjct: 409 NIRQAGLVRGIRDSVFSRICLSNV--KLYGGDSVGPWKCRAVSGGALDVQPSPCAELTST 466
Query: 452 KEPTDC 457
E + C
Sbjct: 467 SEMSFC 472
>gi|21553827|gb|AAM62920.1| polygalacturonase, putative [Arabidopsis thaliana]
Length = 453
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 187/419 (44%), Positives = 254/419 (60%), Gaps = 4/419 (0%)
Query: 40 KNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPG 99
N+ E L+ R HS + +FG VGDGKT NT AF A+ L +A GGAQL VPPG
Sbjct: 21 NNAICKENFKLDPRPHSVSILEFGAVGDGKTLNTIAFQNAVFYLKSFADKGGAQLYVPPG 80
Query: 100 KWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTN 159
KWLTGSFNLTSH TL++ K A +LAS D S W ++ PLPSYGRG + PG R+ SLI G N
Sbjct: 81 KWLTGSFNLTSHLTLFLEKGATILASPDPSHWDVVSPLPSYGRGIELPGKRYRSLINGDN 140
Query: 160 LTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNV 219
L DVV+TG N T +GQG WW N +RP++IE + S ++ ISNLT +++P+ N+
Sbjct: 141 LIDVVITGENGTFDGQGAAWWEWLESGSLNYSRPHIIEFVSSKHILISNLTFLNAPAINI 200
Query: 220 HPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGI 279
HPVY S + I+ + I +DSP+ G+ PDS N IED+ I G D V++KSGWD+YGI
Sbjct: 201 HPVYCSQIHIRKVLIETSVDSPHVLGVAPDSSDNVCIEDSTINVGHDAVSLKSGWDQYGI 260
Query: 280 KVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG 339
G PT + IR L SP A I+ GSEMSGG+ DV E + ++ GV +T GRG
Sbjct: 261 HYGRPTTAVHIRNLRLKSPTGAGISFGSEMSGGVSDVTVERLNIHSSLIGVAFRTTRGRG 320
Query: 340 AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAK 399
Y++ I + + + ++ G GSHPD FD ALP VT I R+ ++ +
Sbjct: 321 GYIRNITISDVDLTSVDTAIVTNGHTGSHPDDKFDRDALPVVTHIVMRNFTGVDIGVAGN 380
Query: 400 LDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTDCF 458
L GI PFT IC++++ + + E W C+N+ G + V+P+ C+ L P+ CF
Sbjct: 381 LTGIGESPFTSICLADIHL---QTRSEESWICSNVSGFSDDVSPEPCQEL-MSSPSSCF 435
>gi|7939578|dbj|BAA95779.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 453
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 187/419 (44%), Positives = 254/419 (60%), Gaps = 4/419 (0%)
Query: 40 KNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPG 99
N+ E L+ R HS + +FG VGDGKT NT AF A+ L +A GGAQL VPPG
Sbjct: 21 NNAICKENFKLDPRPHSVSILEFGAVGDGKTLNTIAFQNAVFYLKSFADKGGAQLYVPPG 80
Query: 100 KWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTN 159
KWLTGSFNLTSH TL++ K A +LAS D S W ++ PLPSYGRG + PG R+ SLI G N
Sbjct: 81 KWLTGSFNLTSHLTLFLEKGATILASPDPSHWDVVSPLPSYGRGIELPGKRYRSLINGDN 140
Query: 160 LTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNV 219
L DVV+TG N T +GQG WW N +RP++IE + S ++ ISNLT +++P+ N+
Sbjct: 141 LIDVVITGENGTFDGQGAAWWEWLESGSLNYSRPHIIEFVSSKHILISNLTFLNAPAINI 200
Query: 220 HPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGI 279
HPVY S + I+ + I +DSP+ G+ PDS N IED+ I G D V++KSGWD+YGI
Sbjct: 201 HPVYCSQIHIRKVLIETSVDSPHVLGVAPDSSDNVCIEDSTINVGHDAVSLKSGWDQYGI 260
Query: 280 KVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG 339
G PT + IR L SP A I+ GSEMSGG+ DV E + ++ GV +T GRG
Sbjct: 261 HYGRPTTAVHIRNLRLKSPTGAGISFGSEMSGGVSDVTVERLNIHSSLIGVAFRTTRGRG 320
Query: 340 AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAK 399
Y++ I + + + ++ G GSHPD FD ALP VT I R+ ++ +
Sbjct: 321 GYIRNITISDVDLTSVDTAIVANGHTGSHPDDKFDRDALPVVTHIVMRNFTGVDIGVAGN 380
Query: 400 LDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTDCF 458
L GI PFT IC++++ + + E W C+N+ G + V+P+ C+ L P+ CF
Sbjct: 381 LTGIGESPFTSICLADIHL---QTRSEESWICSNVSGFSDDVSPEPCQEL-MSSPSSCF 435
>gi|15228881|ref|NP_188308.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|14334802|gb|AAK59579.1| putative polygalacturonase [Arabidopsis thaliana]
gi|21280835|gb|AAM44924.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332642352|gb|AEE75873.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 455
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 187/419 (44%), Positives = 254/419 (60%), Gaps = 4/419 (0%)
Query: 40 KNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPG 99
N+ E L+ R HS + +FG VGDGKT NT AF A+ L +A GGAQL VPPG
Sbjct: 23 NNAICKENFKLDPRPHSVSILEFGAVGDGKTLNTIAFQNAVFYLKSFADKGGAQLYVPPG 82
Query: 100 KWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTN 159
KWLTGSFNLTSH TL++ K A +LAS D S W ++ PLPSYGRG + PG R+ SLI G N
Sbjct: 83 KWLTGSFNLTSHLTLFLEKGATILASPDPSHWDVVSPLPSYGRGIELPGKRYRSLINGDN 142
Query: 160 LTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNV 219
L DVV+TG N T +GQG WW N +RP++IE + S ++ ISNLT +++P+ N+
Sbjct: 143 LIDVVITGENGTFDGQGAAWWEWLESGSLNYSRPHIIEFVSSKHILISNLTFLNAPAINI 202
Query: 220 HPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGI 279
HPVY S + I+ + I +DSP+ G+ PDS N IED+ I G D V++KSGWD+YGI
Sbjct: 203 HPVYCSQIHIRKVLIETSVDSPHVLGVAPDSSDNVCIEDSTINVGHDAVSLKSGWDQYGI 262
Query: 280 KVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG 339
G PT + IR L SP A I+ GSEMSGG+ DV E + ++ GV +T GRG
Sbjct: 263 HYGRPTTAVHIRNLRLKSPTGAGISFGSEMSGGVSDVTVERLNIHSSLIGVAFRTTRGRG 322
Query: 340 AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAK 399
Y++ I + + + ++ G GSHPD FD ALP VT I R+ ++ +
Sbjct: 323 GYIRNITISDVDLTSVDTAIVANGHTGSHPDDKFDRDALPVVTHIVMRNFTGVDIGVAGN 382
Query: 400 LDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTDCF 458
L GI PFT IC++++ + + E W C+N+ G + V+P+ C+ L P+ CF
Sbjct: 383 LTGIGESPFTSICLADIHL---QTRSEESWICSNVSGFSDDVSPEPCQEL-MSSPSSCF 437
>gi|326517826|dbj|BAK03831.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520253|dbj|BAK07385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 495
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 177/393 (45%), Positives = 259/393 (65%), Gaps = 3/393 (0%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
LTDFGGVGDG+T NT+AF A+ ++ +A GGAQL VPPG+WLTG FNLTSH TL++ +
Sbjct: 79 LTDFGGVGDGRTVNTRAFERAVETITAFADRGGAQLNVPPGRWLTGPFNLTSHMTLFLAE 138
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A +L DE WPL+P LPSYG GR+ G RF SLI G NL DVV+TG N +INGQGE
Sbjct: 139 GAEILGITDEKNWPLMPALPSYGYGRERKGPRFGSLIHGQNLKDVVITGYNGSINGQGEV 198
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW+K+R++ TRP L+++M+S ++ ++N+TL +SP W+ HP +NV + +TI +PI
Sbjct: 199 WWLKHRRRMLKNTRPPLVQLMWSKDIVVTNITLRNSPFWHFHPYDCTNVTVSNVTILSPI 258
Query: 239 D-SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
+PNTDGI+PDSC + IE+ YI GDD +A+KSGWD+YGI G + +++IR + S
Sbjct: 259 SGAPNTDGIDPDSCEDVLIENCYISVGDDAIAIKSGWDQYGIAYGRSSSNILIRNVTVRS 318
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
SA I++GSEMSGG+ ++ E++ +++ GVRIKTA+GRG Y++ I +T ++
Sbjct: 319 LVSAGISIGSEMSGGVANITVENVHIWDSRRGVRIKTAIGRGGYIRNISYSNITFDNVRA 378
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
+ DY H D G+D A P +TGI+++ + V + G P I +++
Sbjct: 379 GIVIKVDYNEHADDGYDRNAFPDITGISFKKIHGRGVRVPVRAHGSNYIPIKDITFQDMS 438
Query: 418 IKLTEKPKELQWNCTNIQG-ITSRVTPQACELL 449
+ ++ K K + + C+ I+G + V P+ CE L
Sbjct: 439 VGISYKKKHI-FQCSYIEGRVIGSVFPKPCENL 470
>gi|297844882|ref|XP_002890322.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336164|gb|EFH66581.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 506
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 176/392 (44%), Positives = 261/392 (66%), Gaps = 4/392 (1%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAAD-GGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
L DFGGVGDG T NT+AF A+ ++SK + GG QL VPPG+WLT FNLTSH TL++
Sbjct: 89 LKDFGGVGDGVTLNTEAFERAVISISKLERNSGGGQLNVPPGRWLTAPFNLTSHMTLFLA 148
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
+D+ +L +DE WPL+PPLPSYG GR+ PG R+ SLI G NL D+V+TG N TINGQG+
Sbjct: 149 EDSEILGVEDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQNLKDIVITGHNGTINGQGQ 208
Query: 178 PWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAP 237
WW KY+++ N TR L+++M+S ++ I+N+T+ DSP W +HP NV I+ +TI AP
Sbjct: 209 SWWKKYQRRLLNYTRGPLVQIMWSSDIVIANITMRDSPFWTLHPYDCKNVTIRNVTILAP 268
Query: 238 I-DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICI 296
+ +PNTDGI+PDSC + IED YI +GDD +A+KSGWD++GI G P+ +++IR L+
Sbjct: 269 VTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVR 328
Query: 297 SPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK 356
S SA +++GSEMSGGI +V E++ N++ G+RIKTA GRG Y++ I + +T+ ++
Sbjct: 329 SVISAGVSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVR 388
Query: 357 YVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNV 416
+ DY H D +D KA P ++G ++ + V ++ G P + ++
Sbjct: 389 VGIVIKTDYNEHADDNYDRKAYPILSGFSFAGIHGQGVRVPVRIHGSEQIPVRNVTFRDM 448
Query: 417 TIKLTEKPKELQWNCTNIQG-ITSRVTPQACE 447
++ LT K K + + C+ ++G + + P+ CE
Sbjct: 449 SVGLTYKKKHI-FQCSFVKGRVFGSIFPRPCE 479
>gi|449432886|ref|XP_004134229.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 457
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 184/400 (46%), Positives = 252/400 (63%), Gaps = 1/400 (0%)
Query: 50 LNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLT 109
L+ R HS + +FG VGDGKT NT AF AI L +A GGAQL VPPGKWLTGS NLT
Sbjct: 35 LDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSINLT 94
Query: 110 SHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGN 169
SH TL++ K A++L SQD S W L+ PLPSYGRG + PG R+ SLI G NL DVV+TG +
Sbjct: 95 SHLTLFLEKGAVILGSQDPSHWELVNPLPSYGRGIEVPGKRYRSLINGYNLQDVVITGDD 154
Query: 170 ATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
I+GQG WW + N +RP+L+E S V +SNLT +++P++N+HPVY SNV +
Sbjct: 155 GVIDGQGLVWWNWFSSHSLNYSRPHLVEFEDSQYVVVSNLTFLNTPAYNIHPVYCSNVYV 214
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
+++ AP +SP T GI PDS + IE I +G D +A+KSGWD+YGI G P++++
Sbjct: 215 YNISVSAPSESPYTVGIVPDSSDHVCIEGCNIATGYDAIALKSGWDQYGIAYGRPSKNIH 274
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRR 349
IRR+ S ++IA GSEMSGGI +V E + N+ G++I+T GRG Y+K I V
Sbjct: 275 IRRVHLQSSSGSSIAFGSEMSGGISNVLVEHVQLNNSFIGIQIRTTKGRGGYIKGIVVSD 334
Query: 350 MTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFT 409
+ M+ + F +G +GSHPD +DP ALP V I +++ N+ + GI+ PFT
Sbjct: 335 VEMENISTAFSASGHFGSHPDDEYDPNALPIVQDITLQNVRGTNIKIAGNFSGIQESPFT 394
Query: 410 GICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL 449
I +SN+T + W C+++ G + V P C L
Sbjct: 395 SIYLSNITFSINSS-SSTSWICSDVSGFSESVIPPPCSDL 433
>gi|449531087|ref|XP_004172519.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like,
partial [Cucumis sativus]
Length = 452
Score = 364 bits (934), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 184/400 (46%), Positives = 252/400 (63%), Gaps = 1/400 (0%)
Query: 50 LNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLT 109
L+ R HS + +FG VGDGKT NT AF AI L +A GGAQL VPPGKWLTGS NLT
Sbjct: 30 LDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSINLT 89
Query: 110 SHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGN 169
SH TL++ K A++L SQD S W L+ PLPSYGRG + PG R+ SLI G NL DVV+TG +
Sbjct: 90 SHLTLFLXKGAVILGSQDPSHWELVNPLPSYGRGIEVPGKRYRSLINGYNLQDVVITGDD 149
Query: 170 ATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
I+GQG WW + N +RP+L+E S V +SNLT +++P++N+HPVY SNV +
Sbjct: 150 GVIDGQGLVWWNWFSSHSLNYSRPHLVEFEDSQYVVVSNLTFLNTPAYNIHPVYCSNVYV 209
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
+++ AP +SP T GI PDS + IE I +G D +A+KSGWD+YGI G P++++
Sbjct: 210 YNISVSAPSESPYTVGIVPDSSDHVCIEGCNIATGYDAIALKSGWDQYGIAYGRPSKNIH 269
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRR 349
IRR+ S ++IA GSEMSGGI +V E + N+ G++I+T GRG Y+K I V
Sbjct: 270 IRRVHLQSSSGSSIAFGSEMSGGISNVLVEHVQLNNSFIGIQIRTTKGRGGYIKGIVVSD 329
Query: 350 MTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFT 409
+ M+ + F +G +GSHPD +DP ALP V I +++ N+ + GI+ PFT
Sbjct: 330 VEMENISTAFSASGHFGSHPDDEYDPNALPIVQDITLQNVRGTNIKIAGNFSGIQESPFT 389
Query: 410 GICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL 449
I +SN+T + W C+++ G + V P C L
Sbjct: 390 SIYLSNITFSINSS-SSTSWICSDVSGFSESVIPPPCSDL 428
>gi|357139453|ref|XP_003571296.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 485
Score = 363 bits (933), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 262/401 (65%), Gaps = 4/401 (0%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGA--QLIVPPGKWLTGSFNLTS 110
R SA + +FG VGDG TSNT AF A++ L + AA G L VPPG+WLTGSFNLTS
Sbjct: 73 RAASASVEEFGAVGDGVTSNTAAFRRAVAALEQRAAAAGGGAMLEVPPGRWLTGSFNLTS 132
Query: 111 HFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNA 170
FTL++H A++L SQD EWPL+ PLPSYGRGR+ G R SLI G NL DVV+TG N
Sbjct: 133 RFTLFLHHGAVILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGENLDDVVITGSNG 192
Query: 171 TINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQ 230
TI+GQG WW + + N TR +LIE++ S NV ISN+TL +SP W VHPVY NV+I+
Sbjct: 193 TIDGQGRMWWELWWNRTLNHTRGHLIELVNSTNVMISNVTLRNSPFWTVHPVYCRNVVIK 252
Query: 231 GLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLII 290
LTI AP+++PNTDGI+PDS ++ IED YI SGDD VA+KSGWD+YGI V P+ ++II
Sbjct: 253 DLTILAPLNAPNTDGIDPDSSSDVCIEDCYIESGDDLVAIKSGWDQYGISVNKPSTNIII 312
Query: 291 RRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRM 350
+R+ +P + + +GSEMSGG+ V D+ N+ S VRIKT VGRG +V + V +
Sbjct: 313 QRVSGTTPTCSGVGIGSEMSGGVSGVLIRDLHVWNSASAVRIKTDVGRGGFVTNVTVANV 372
Query: 351 TMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTG 410
TM+ +K + H D +D ALPT++ + D+V +V ++ L+ + + G
Sbjct: 373 TMERVKVPIRFSRGSDDHSDDKYDRTALPTISDVRIVDIVGVDVQRAPILEAVHGAVYEG 432
Query: 411 ICISNVTIKLTEKPKELQ--WNCTNIQGITSRVTPQACELL 449
IC NV+++L E+ + W C ++ G V P+ACE L
Sbjct: 433 ICFRNVSLRLREEVRRRHAGWQCESVYGEAHGVFPEACEEL 473
>gi|326496364|dbj|BAJ94644.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509249|dbj|BAJ91541.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510305|dbj|BAJ87369.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518514|dbj|BAJ88286.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 186/391 (47%), Positives = 252/391 (64%), Gaps = 3/391 (0%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ FGG GDG+T NT AF A++++++ A GGA L VPPG WLTG F+LTSH TL++ +
Sbjct: 50 IASFGGAGDGRTLNTAAFAAAVASIARRRARGGALLYVPPGVWLTGPFSLTSHMTLFLAR 109
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A++ A+QD S WPL+ PLPSYGRGR+ PG R+ SLI G L DV +TG N TI+GQG
Sbjct: 110 GAVIRATQDTSSWPLIDPLPSYGRGRELPGKRYISLIHGNGLQDVFITGENGTIDGQGSV 169
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW ++K TRP+L+E+M S N +SNL DSP WN+HPVY SNV+I+ LTI AP
Sbjct: 170 WWDMWKKGTLPFTRPHLLELMDSSNAIVSNLVFQDSPFWNIHPVYCSNVVIRNLTILAPH 229
Query: 239 DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISP 298
DSPNTDGI+PDS +N IED YI +GDD +A+KSGWDEYGI G P+ + IRR+ SP
Sbjct: 230 DSPNTDGIDPDSSSNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSSDITIRRITGSSP 289
Query: 299 DSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYV 358
A ++GSE SGG+++V AE + ++ GV IKT GRG +++ I V + + ++Y
Sbjct: 290 -FAGFSVGSETSGGVENVLAEHLNFYSSGFGVHIKTNSGRGGFIRNITVSDVILDNVRYG 348
Query: 359 FWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
+ GD G HPD ++ ALP V + +++ N+ ++ + GI N F+ IC+SN I
Sbjct: 349 LRIAGDVGGHPDERYNHNALPIVDSLMIKNVQGQNIKEAGLIKGIPNSAFSRICLSN--I 406
Query: 419 KLTEKPKELQWNCTNIQGITSRVTPQACELL 449
KL W C + G V P C L
Sbjct: 407 KLHGSAPVRPWKCQAVSGGALDVQPSPCTEL 437
>gi|326488219|dbj|BAJ89948.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 186/391 (47%), Positives = 252/391 (64%), Gaps = 3/391 (0%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ FGG GDG+T NT AF A++++++ A GGA L VPPG WLTG F+LTSH TL++ +
Sbjct: 50 VASFGGAGDGRTLNTAAFAAAVASIARRRARGGALLYVPPGVWLTGPFSLTSHMTLFLAR 109
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A++ A+QD S WPL+ PLPSYGRGR+ PG R+ SLI G L DV +TG N TI+GQG
Sbjct: 110 GAVIRATQDTSSWPLIDPLPSYGRGRELPGKRYISLIHGNGLQDVFITGENGTIDGQGSV 169
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW ++K TRP+L+E+M S N +SNL DSP WN+HPVY SNV+I+ LTI AP
Sbjct: 170 WWDMWKKGTLPFTRPHLLELMDSSNAIVSNLVFQDSPFWNIHPVYCSNVVIRNLTILAPH 229
Query: 239 DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISP 298
DSPNTDGI+PDS +N IED YI +GDD +A+KSGWDEYGI G P+ + IRR+ SP
Sbjct: 230 DSPNTDGIDPDSSSNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSSDITIRRITGSSP 289
Query: 299 DSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYV 358
A ++GSE SGG+++V AE + ++ GV IKT GRG +++ I V + + ++Y
Sbjct: 290 -FAGFSVGSETSGGVENVLAEHLNFYSSGFGVHIKTNSGRGGFIRNITVSDVILDNVRYG 348
Query: 359 FWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
+ GD G HPD ++ ALP V + +++ N+ ++ + GI N F+ IC+SN I
Sbjct: 349 LRIAGDVGGHPDERYNHNALPIVDSLMIKNVQGQNIKEAGLIKGIPNSAFSRICLSN--I 406
Query: 419 KLTEKPKELQWNCTNIQGITSRVTPQACELL 449
KL W C + G V P C L
Sbjct: 407 KLHGSAPVRPWKCQAVSGGALDVQPSPCTEL 437
>gi|79330402|ref|NP_001032043.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|110739511|dbj|BAF01664.1| hypothetical protein [Arabidopsis thaliana]
gi|332008402|gb|AED95785.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 447
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 179/396 (45%), Positives = 247/396 (62%), Gaps = 3/396 (0%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +TDFG VGDGKT NT AF A+ L +A GGAQL VPPG+WLTGSFNLTSH
Sbjct: 37 RPHSVKITDFGAVGDGKTLNTLAFQNAVFYLKSFADKGGAQLYVPPGRWLTGSFNLTSHL 96
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL++ KDA++LASQD S W + LPSYGRG D PG R+ SLI G L DVVVTG N TI
Sbjct: 97 TLFLEKDAVILASQDPSHWQVTDALPSYGRGIDLPGKRYMSLINGDMLHDVVVTGDNGTI 156
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW ++ +RP+L+E + ++NV +SNLT +++P++ +H VY N+ I +
Sbjct: 157 DGQGLVWWDRFNSHSLEYSRPHLVEFVSAENVIVSNLTFLNAPAYTIHSVYCRNLYIHRV 216
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
T +SP T GI PDS N I+++ I G D +++KSG DEYG+ PT ++ IR
Sbjct: 217 TANTCPESPYTIGIVPDSSENVCIQESSINMGYDAISLKSGCDEYGLSYARPTANVQIRN 276
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ + ++I+ GSEMSGGI DV D N+ SG+ +T GRG Y+KEI + + M
Sbjct: 277 VYLRAASGSSISFGSEMSGGISDVEVSDAHIHNSLSGIAFRTTNGRGGYIKEIDISNIHM 336
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+ F G +G+HPD GFD A P V+ I D+V +N++ + G + PFT I
Sbjct: 337 VNVGTAFLANGSFGTHPDSGFDENAYPLVSHIRLHDIVGENISTAGYFFGTKESPFTSIL 396
Query: 413 ISNV--TIKLTEKPKELQWNCTNIQGITSRVTPQAC 446
+SN+ +IK + P + W C+ + G + V P+ C
Sbjct: 397 LSNISLSIKNSASPAD-SWQCSYVDGSSEFVVPEPC 431
>gi|125526876|gb|EAY74990.1| hypothetical protein OsI_02888 [Oryza sativa Indica Group]
Length = 445
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 179/381 (46%), Positives = 248/381 (65%), Gaps = 3/381 (0%)
Query: 69 KTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDE 128
+T +T AF A++++ + A GGA L VPPG WLTG FNLTSH TL++ + A++ A+QD
Sbjct: 55 RTLSTAAFQAAVASIERRRAPGGALLYVPPGVWLTGPFNLTSHMTLFLARGAVIRATQDT 114
Query: 129 SEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQF 188
S WPL+ PL SYGRGR+ PGGR+ SLI G L DVV+TG N TI+GQG WW ++K
Sbjct: 115 SSWPLIEPLLSYGRGRELPGGRYMSLIHGNGLQDVVITGDNGTIDGQGSAWWDMWKKGTL 174
Query: 189 NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINP 248
TRP+L+E+M S +V +SN+ DSP WN+HPVY SNV+I+ +T+ AP DSPNTDGI+P
Sbjct: 175 PFTRPHLLELMNSSDVVVSNVVFQDSPFWNIHPVYCSNVVIRNVTVLAPHDSPNTDGIDP 234
Query: 249 DSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSE 308
DS +N IED YI +GDD +A+KSGWDEYG+ G P+ H+ IRR+ SP A A+GSE
Sbjct: 235 DSSSNVCIEDCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRRITGSSP-FAGFAVGSE 293
Query: 309 MSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSH 368
SGG++ V AE + ++ G+ IKT GRG +++ + V +T+ +++Y + GD G H
Sbjct: 294 TSGGVEHVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGH 353
Query: 369 PDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQ 428
PD +D ALP V G+ +++ N+ ++ + GI F+ IC+SNV KL
Sbjct: 354 PDDRYDRNALPVVDGLTIKNVQGQNIREAGSIKGIATSAFSRICLSNV--KLNGGAAVRP 411
Query: 429 WNCTNIQGITSRVTPQACELL 449
W C + G V P C L
Sbjct: 412 WKCEAVSGAALDVQPSPCTEL 432
>gi|22327662|ref|NP_680409.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|20258821|gb|AAM14020.1| unknown protein [Arabidopsis thaliana]
gi|22136814|gb|AAM91751.1| unknown protein [Arabidopsis thaliana]
gi|332008401|gb|AED95784.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 360 bits (925), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 179/396 (45%), Positives = 247/396 (62%), Gaps = 3/396 (0%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +TDFG VGDGKT NT AF A+ L +A GGAQL VPPG+WLTGSFNLTSH
Sbjct: 39 RPHSVKITDFGAVGDGKTLNTLAFQNAVFYLKSFADKGGAQLYVPPGRWLTGSFNLTSHL 98
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL++ KDA++LASQD S W + LPSYGRG D PG R+ SLI G L DVVVTG N TI
Sbjct: 99 TLFLEKDAVILASQDPSHWQVTDALPSYGRGIDLPGKRYMSLINGDMLHDVVVTGDNGTI 158
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW ++ +RP+L+E + ++NV +SNLT +++P++ +H VY N+ I +
Sbjct: 159 DGQGLVWWDRFNSHSLEYSRPHLVEFVSAENVIVSNLTFLNAPAYTIHSVYCRNLYIHRV 218
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
T +SP T GI PDS N I+++ I G D +++KSG DEYG+ PT ++ IR
Sbjct: 219 TANTCPESPYTIGIVPDSSENVCIQESSINMGYDAISLKSGCDEYGLSYARPTANVQIRN 278
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ + ++I+ GSEMSGGI DV D N+ SG+ +T GRG Y+KEI + + M
Sbjct: 279 VYLRAASGSSISFGSEMSGGISDVEVSDAHIHNSLSGIAFRTTNGRGGYIKEIDISNIHM 338
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+ F G +G+HPD GFD A P V+ I D+V +N++ + G + PFT I
Sbjct: 339 VNVGTAFLANGSFGTHPDSGFDENAYPLVSHIRLHDIVGENISTAGYFFGTKESPFTSIL 398
Query: 413 ISNV--TIKLTEKPKELQWNCTNIQGITSRVTPQAC 446
+SN+ +IK + P + W C+ + G + V P+ C
Sbjct: 399 LSNISLSIKNSASPAD-SWQCSYVDGSSEFVVPEPC 433
>gi|357494037|ref|XP_003617307.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
gi|355518642|gb|AET00266.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
Length = 450
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 202/442 (45%), Positives = 275/442 (62%), Gaps = 7/442 (1%)
Query: 22 TLLTLGLLSPQVAECRPTKNSYTI---EFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNT 78
T LTL L C ++N+ I L R + LTDFGGVGDG T NTKAF
Sbjct: 6 TKLTLLFLYTCCWVCVLSENNEVITCSNIVPLKYRTDNISLTDFGGVGDGHTLNTKAFRE 65
Query: 79 AISNLSKYAA-DGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPL 137
AI ++ + +GG L VPPG +LT FNLTSH TL++ A++ A+QD S WPL+ PL
Sbjct: 66 AIYRINHLSQREGGTTLYVPPGVYLTEPFNLTSHMTLHLAAGAVIKATQDSSNWPLIAPL 125
Query: 138 PSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIE 197
PSYGRGR+ PGGR+ S I G L DVV+TG N TI+GQG+ WW +RK+ TRP L+E
Sbjct: 126 PSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGDVWWNMWRKRTLQFTRPNLVE 185
Query: 198 VMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIE 257
+ S ++ ISN+ DSP WN+HPVY SNV+I+ TI AP DSPNTDGI+PDS +N IE
Sbjct: 186 FVNSKDIIISNVIFKDSPFWNIHPVYCSNVVIRFATILAPRDSPNTDGIDPDSSSNVCIE 245
Query: 258 DNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVR 317
D+YI +GDD VAVKSGWDEYGI G + ++ IRR+ SP A IA+GSE SGG++++
Sbjct: 246 DSYISTGDDLVAVKSGWDEYGIAYGRSSSNITIRRVSGSSP-FAGIAVGSETSGGVENIL 304
Query: 318 AEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKA 377
AE I N G+ IKT +GRG Y+K I V + ++ + ++GD G H D +D A
Sbjct: 305 AEHINLYNMGIGIHIKTNIGRGGYIKNINVSNVYIENARKGIKISGDVGDHADDKYDSNA 364
Query: 378 LPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTE--KPKELQWNCTNIQ 435
LP V GI ++ V Q+ + G+++ PFT IC+S++ + + + W C+++
Sbjct: 365 LPIVKGITMANVWGVKVLQAGLIKGMKHSPFTDICLSDINLHGVNGTRSRTPSWQCSDVS 424
Query: 436 GITSRVTPQACELLPKKEPTDC 457
G+ +V+P C L + C
Sbjct: 425 GVALQVSPWPCSELISHQLGSC 446
>gi|357137810|ref|XP_003570492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 496
Score = 360 bits (924), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 176/393 (44%), Positives = 257/393 (65%), Gaps = 3/393 (0%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
LTDFGGVGDG+T NT+AF A+ ++ A GG QL VPPG+WLT FNLTSH TL++ +
Sbjct: 80 LTDFGGVGDGRTLNTQAFERAVEAIAALADRGGGQLNVPPGRWLTAPFNLTSHMTLFLAE 139
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A +L DE W L+P LPSYG GR+ G R+ SLI G NL DVV+TG N +INGQGE
Sbjct: 140 GAEILGITDEKYWTLMPALPSYGYGRERKGPRYGSLIHGQNLKDVVITGYNGSINGQGEV 199
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW+K+R++ TRP L+++M+S ++ ++N+TL +SP W+ HP +NV + +TI AP+
Sbjct: 200 WWLKHRRRMLKNTRPPLVQLMWSSDIIVTNITLRNSPFWHFHPYDCTNVTVSNVTILAPV 259
Query: 239 D-SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
+PNTDGI+PDSC + IE+ YI GDD +AVKSGWD+YGI G P+ +++IR + S
Sbjct: 260 SGAPNTDGIDPDSCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSSNILIRNVAVRS 319
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
SA I++GSEMSGG+ +V E++ +++ GVRIKTA GRG Y++ I R +T ++
Sbjct: 320 LVSAGISIGSEMSGGVANVTVENVRIWDSRRGVRIKTATGRGGYIRNISYRNITFDNVRA 379
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
+ DY H D G+D A P +TGI+++++ V + G P + +++
Sbjct: 380 GIVIKVDYNEHADDGYDRNAFPDITGISFKEIHGWGVRVPVRAHGSNIIPIKDVTFQDMS 439
Query: 418 IKLTEKPKELQWNCTNIQG-ITSRVTPQACELL 449
+ ++ K K + + C+ I+G + V P+ CE L
Sbjct: 440 VGISYKKKHI-FQCSYIEGRVIGSVFPKPCENL 471
>gi|125541363|gb|EAY87758.1| hypothetical protein OsI_09176 [Oryza sativa Indica Group]
Length = 545
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 180/415 (43%), Positives = 262/415 (63%), Gaps = 19/415 (4%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R + LTDFGGVGDG+ NT+AF A+ ++ A GG QL VP G+WLT FNLTSH
Sbjct: 80 RPKAYELTDFGGVGDGRAVNTEAFERAVKAIAALAERGGGQLNVPLGRWLTAPFNLTSHM 139
Query: 113 TLYIHKDALLLA----------------SQDESEWPLLPPLPSYGRGRDEPGGRFSSLIF 156
TL++ + + +L +DE WPL+P LPSYG GR+ G RF SLI
Sbjct: 140 TLFLAEGSEILGIPSFREVQKLVLLSGFDRDERYWPLMPALPSYGYGRERKGPRFGSLIH 199
Query: 157 GTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPS 216
G NL DVV+TG N +INGQGE WW+K+R++ N TRP L+++M+S ++ ++N+TL +SP
Sbjct: 200 GQNLKDVVITGHNGSINGQGEVWWMKHRRRILNNTRPPLLQLMWSKDIIVANITLKNSPF 259
Query: 217 WNVHPVYSSNVLIQGLTIRAPIDS-PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWD 275
W+ HP +N+ + +TI API S PNTDGI+PDSC + IE+ YI GDD +AVKSGWD
Sbjct: 260 WHFHPYDCTNITVSNVTILAPISSAPNTDGIDPDSCQDVLIENCYISVGDDAIAVKSGWD 319
Query: 276 EYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTA 335
+YGI G P+++++IR ++ S SA I++GSEMSGGI +V ED+ ++ G+RIKTA
Sbjct: 320 QYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEMSGGIANVTVEDVRIWESRRGLRIKTA 379
Query: 336 VGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVT 395
+GRG Y+ +I R +T ++ + DY H D G+D A P +T I+++++ V
Sbjct: 380 IGRGGYIHDISYRNITFDNVRAGIVIKVDYNEHADDGYDRDAFPDITNISFKEIHGRGVR 439
Query: 396 QSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQG-ITSRVTPQACELL 449
+ G + P I +++I ++ K K + + C+ I+G + V P+ CE L
Sbjct: 440 VPVRAHGSSDIPIKDISFQDMSIGISYKKKHI-FQCSFIEGRVIGSVFPKPCENL 493
>gi|15221958|ref|NP_173351.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|332191692|gb|AEE29813.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 506
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 174/392 (44%), Positives = 259/392 (66%), Gaps = 4/392 (1%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGA-QLIVPPGKWLTGSFNLTSHFTLYIH 117
L DFGGVGDG T NT+AF A+ ++SK G QL VPPG+WLT FNLTSH TL++
Sbjct: 89 LKDFGGVGDGFTLNTEAFERAVISISKLGGSSGGGQLNVPPGRWLTAPFNLTSHMTLFLA 148
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
+D+ +L +DE WPL+PPLPSYG GR+ PG R+ SLI G NL D+V+TG N TINGQG+
Sbjct: 149 EDSEILGVEDEKYWPLMPPLPSYGYGRERPGPRYGSLIHGQNLKDIVITGHNGTINGQGQ 208
Query: 178 PWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAP 237
WW K++++ N TR L+++M+S ++ I+N+T+ DSP W +HP NV I+ +TI AP
Sbjct: 209 SWWKKHQRRLLNYTRGPLVQIMWSSDIVIANITMRDSPFWTLHPYDCKNVTIRNVTILAP 268
Query: 238 I-DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICI 296
+ +PNTDGI+PDSC + IED YI +GDD +A+KSGWD++GI G P+ +++IR L+
Sbjct: 269 VTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVR 328
Query: 297 SPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK 356
S SA +++GSEMSGGI +V E++ N++ G+RIKTA GRG Y++ I + +T+ ++
Sbjct: 329 SVISAGVSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVR 388
Query: 357 YVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNV 416
+ DY H D +D KA P ++G ++ + V ++ G P + ++
Sbjct: 389 VGIVIKTDYNEHADDNYDRKAYPILSGFSFAGIHGQGVRVPVRIHGSEQIPVRNVTFRDM 448
Query: 417 TIKLTEKPKELQWNCTNIQG-ITSRVTPQACE 447
++ LT K K + + C+ ++G + + P+ CE
Sbjct: 449 SVGLTYKKKHI-FQCSFVKGRVFGSIFPRPCE 479
>gi|226492991|ref|NP_001140630.1| uncharacterized protein LOC100272705 [Zea mays]
gi|194700250|gb|ACF84209.1| unknown [Zea mays]
gi|413924334|gb|AFW64266.1| hypothetical protein ZEAMMB73_686606 [Zea mays]
Length = 495
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 174/393 (44%), Positives = 253/393 (64%), Gaps = 3/393 (0%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+TDFG VGDG+ NT AF A+ ++ A GG QL VPPG+WLT FNLTSH TL++ +
Sbjct: 79 ITDFGAVGDGRAVNTAAFERAVEAIAALAERGGGQLNVPPGRWLTAPFNLTSHMTLFLAE 138
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A +L DE WPL+P LPSYG GR+ G RF SLI G NL DVV+TG N +INGQGE
Sbjct: 139 GAEILGITDEKYWPLMPALPSYGYGRERKGPRFGSLIHGQNLRDVVITGHNGSINGQGEV 198
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW+K+R++ N TRP L+++M+S ++ ++N+TL +SP W++HP +NV + +TI +P+
Sbjct: 199 WWMKHRRRILNNTRPPLVQLMWSKDIIVANITLRNSPFWHLHPYDCTNVTVSNVTIMSPV 258
Query: 239 D-SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
+PNTDGI+PDSC + IE+ YI GDD +A+KSGWD+YGI G P+ ++IR + S
Sbjct: 259 SGAPNTDGIDPDSCQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSDILIRNVTARS 318
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
SA I++GSEMSGG+ +V E++ ++ GVRIKTA GRG Y++ I R +T ++
Sbjct: 319 LVSAGISIGSEMSGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVRA 378
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
+ DY H D G+D A P +T I+++ + V + G P I +++
Sbjct: 379 GIVIKVDYNEHADDGYDRTAFPDITSISFKGIHGQGVRVPVRAHGSDVIPIKDISFQDMS 438
Query: 418 IKLTEKPKELQWNCTNIQGITSR-VTPQACELL 449
+ ++ K K + + C+ ++G R V P+ CE L
Sbjct: 439 VGISYKKKHI-FQCSYLEGRVIRPVFPKPCENL 470
>gi|109509134|gb|ABG34276.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 241
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 168/235 (71%), Positives = 194/235 (82%), Gaps = 3/235 (1%)
Query: 244 DGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAI 303
DGINPDSCTNT+IED YIVSGDDCVAVKSGWDEYGI GMPT+ L+IRRL CISP SA I
Sbjct: 1 DGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPTSAVI 60
Query: 304 ALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTG 363
ALGSEMSGGI+DVRAEDI AIN++SGVRIKTA+GRG YVK+IYV+ MTM+TMK+VFWMTG
Sbjct: 61 ALGSEMSGGIEDVRAEDILAINSESGVRIKTAIGRGGYVKDIYVKGMTMRTMKWVFWMTG 120
Query: 364 DYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEK 423
+YGSH D +DP ALP + INYRDMVA+NVT +A+L+GI DPFTGICISNVTI L +K
Sbjct: 121 NYGSHADNNYDPNALPLIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIGLAQK 180
Query: 424 PKELQWNCTNIQGITSRVTPQACELLPKKEPTD---CFFPDDKLPIDDVRLNTCS 475
PK+LQWNCT+I GI+S V PQ C LP + P C FP+D+L ID+V CS
Sbjct: 181 PKKLQWNCTDISGISSSVVPQPCNALPNQGPEKLPACNFPEDRLSIDEVEAQVCS 235
>gi|19698861|gb|AAL91166.1| unknown protein [Arabidopsis thaliana]
gi|23197646|gb|AAN15350.1| unknown protein [Arabidopsis thaliana]
Length = 506
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 173/392 (44%), Positives = 258/392 (65%), Gaps = 4/392 (1%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGA-QLIVPPGKWLTGSFNLTSHFTLYIH 117
L DFGGVGDG T NT+AF A+ ++SK G QL VPPG+WLT F LTSH TL++
Sbjct: 89 LKDFGGVGDGFTLNTEAFERAVISISKLGGSSGGGQLNVPPGRWLTAPFYLTSHMTLFLA 148
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
+D+ +L +DE WPL+PPLPSYG GR+ PG R+ SLI G NL D+V+TG N TINGQG+
Sbjct: 149 EDSEILGVEDEKYWPLMPPLPSYGYGRERPGPRYGSLIHGQNLKDIVITGHNGTINGQGQ 208
Query: 178 PWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAP 237
WW K++++ N TR L+++M+S ++ I+N+T+ DSP W +HP NV I+ +TI AP
Sbjct: 209 SWWKKHQRRLLNYTRGPLVQIMWSSDIVIANITMRDSPFWTLHPYDCKNVTIRNVTILAP 268
Query: 238 I-DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICI 296
+ +PNTDGI+PDSC + IED YI +GDD +A+KSGWD++GI G P+ +++IR L+
Sbjct: 269 VTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVR 328
Query: 297 SPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK 356
S SA +++GSEMSGGI +V E++ N++ G+RIKTA GRG Y++ I + +T+ ++
Sbjct: 329 SVISAGVSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVR 388
Query: 357 YVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNV 416
+ DY H D +D KA P ++G ++ + V ++ G P + ++
Sbjct: 389 VGIVIKTDYNEHADDNYDRKAYPILSGFSFAGIHGQGVRVPVRIHGSEQIPVRNVTFRDM 448
Query: 417 TIKLTEKPKELQWNCTNIQG-ITSRVTPQACE 447
++ LT K K + + C+ ++G + + P+ CE
Sbjct: 449 SVGLTYKKKHI-FQCSFVKGRVFGSIFPRPCE 479
>gi|242044796|ref|XP_002460269.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
gi|241923646|gb|EER96790.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
Length = 518
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 180/393 (45%), Positives = 252/393 (64%), Gaps = 6/393 (1%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L +FG VGDG+T NT AF +AI+ + A GG +L VP G+WLT FNLTSH L++
Sbjct: 105 LREFGAVGDGRTVNTAAFESAIAAI---AERGGGRLTVPAGRWLTAPFNLTSHMILFLAA 161
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A +L QDE WPL+ PLPSYG GR+ G R+ SLI G +L DV +TG N TINGQG+
Sbjct: 162 GAEILGIQDERYWPLMSPLPSYGYGREHKGPRYGSLIHGQDLKDVTITGHNGTINGQGQS 221
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW+K+R+K N TR L+++M S ++ ISN+TL DSP W +H NV I TI API
Sbjct: 222 WWVKFRRKLLNHTRGPLVQLMRSSDIIISNITLRDSPFWTLHTYDCKNVTISETTILAPI 281
Query: 239 -DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
+PNTDGI+PDSC N I++ YI GDD +A+KSGWD+YGI G P+ +++I+ ++ S
Sbjct: 282 AGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSANIVIQNVVIRS 341
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
SA +++GSEMSGG+ DV E++ +++ GVRIKTA GRGAYV I R +T++ ++
Sbjct: 342 MVSAGVSIGSEMSGGVSDVLVENVHVWDSRRGVRIKTAPGRGAYVTNIVYRNITLENVRV 401
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
+ DY HPD GFDPKA+PT+ I+Y + V ++ G P + +++
Sbjct: 402 GIVIKTDYNEHPDEGFDPKAVPTIGNISYTSIHGHRVRVPVRIQGSAEIPVKNVTFHDMS 461
Query: 418 IKLTEKPKELQWNCTNIQG-ITSRVTPQACELL 449
I + +K K + C+ +QG + V P C+ L
Sbjct: 462 IGIVDK-KHHVFQCSFVQGQVIGYVFPVPCKNL 493
>gi|242063272|ref|XP_002452925.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
gi|241932756|gb|EES05901.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
Length = 500
Score = 354 bits (908), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 175/393 (44%), Positives = 253/393 (64%), Gaps = 3/393 (0%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
LTDFG VGDG+ NT+AF A+ ++ A GG QL VPPG+WLT FNLTSH TL++ +
Sbjct: 84 LTDFGAVGDGRAVNTEAFERAVETIAALAERGGGQLNVPPGRWLTAPFNLTSHMTLFLAE 143
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A +L DE WPL+P LPSYG GR+ G RF SLI G NL DVV+TG N +INGQGE
Sbjct: 144 GAEILGITDEKYWPLMPALPSYGYGRERKGPRFGSLIHGQNLKDVVITGHNGSINGQGEV 203
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW+K+R++ N TRP L+++M+S ++ I+N+TL +SP W++HP +NV + +TI +P+
Sbjct: 204 WWMKHRRRILNNTRPPLVQLMWSKDIIIANITLRNSPFWHLHPYDCTNVTVSNVTILSPV 263
Query: 239 D-SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
+PNTDGI+PDS + IE+ YI GDD +A+KSGWD+YGI G P+ ++ IR + S
Sbjct: 264 SGAPNTDGIDPDSSQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSNISIRNVNARS 323
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
SA I++GSEMSGG+ +V E++ ++ GVRIKTA GRG Y++ I R +T ++
Sbjct: 324 LVSAGISIGSEMSGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVRA 383
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
+ DY H D G+D A P +T I+++ + V + G P I +++
Sbjct: 384 GIVIKVDYNEHADDGYDRTAFPDITSISFKGIHGRGVRVPVRAHGSDVIPIRDISFQDMS 443
Query: 418 IKLTEKPKELQWNCTNIQGITSR-VTPQACELL 449
+ ++ K K + + C+ ++G R V P+ CE L
Sbjct: 444 VGISYKKKHI-FQCSYVEGRVVRPVFPKPCENL 475
>gi|297833452|ref|XP_002884608.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297330448|gb|EFH60867.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 446
Score = 354 bits (908), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 174/405 (42%), Positives = 250/405 (61%), Gaps = 1/405 (0%)
Query: 49 ALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNL 108
+L+ R HS +TDFG VGDGKT NT AF A+ L +A GGAQL VPPG WLTGSF+L
Sbjct: 35 SLSTRPHSVSITDFGAVGDGKTLNTLAFQNAVFYLMSFADKGGAQLYVPPGNWLTGSFSL 94
Query: 109 TSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGG 168
TSH TL++ A+++ASQD S W ++ PLPSYGRG D PG R+ SLI G L DVVVTG
Sbjct: 95 TSHLTLFLENGAVIVASQDPSHWEVVDPLPSYGRGTDLPGKRYKSLINGNMLHDVVVTGD 154
Query: 169 NATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
N TI+GQG WW ++ RP+LIE + S NV +SNLT +++P++ +H +YSS+V
Sbjct: 155 NGTIDGQGLVWWDRFTSHSLKYNRPHLIEFLSSKNVIVSNLTFLNAPAYTIHSIYSSHVY 214
Query: 229 IQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHL 288
I + + +SP T GI PDS I+++ I G D +++KSGWDEYGI PT+++
Sbjct: 215 IHKILAHSSPESPYTIGIVPDSSNYVCIQNSTINVGYDAISLKSGWDEYGIAYSRPTENV 274
Query: 289 IIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVR 348
IR + ++I+ GSEMSGGI DV ++ N+ +G+ +T GRG Y+KEI +
Sbjct: 275 HIRNVYLRGASGSSISFGSEMSGGISDVVVDNAHMHNSLTGIAFRTTKGRGGYIKEIDIS 334
Query: 349 RMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPF 408
+ M + G +GSHPD +D ALP V+ I ++ +N+ + KL GI+ PF
Sbjct: 335 NIDMSRIGTAIVANGSFGSHPDDKYDANALPLVSHIRLSNISGENIGIAGKLFGIKESPF 394
Query: 409 TGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKE 453
+ + +SN+ + + + W C+ + G + V P+ C L + +
Sbjct: 395 SAVALSNIALSTSSG-SSVSWQCSYVYGSSESVIPEPCPELKRDD 438
>gi|81074755|gb|ABB55373.1| polygalacturonase-like protein-like [Solanum tuberosum]
Length = 479
Score = 354 bits (908), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 188/425 (44%), Positives = 252/425 (59%), Gaps = 11/425 (2%)
Query: 34 AECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQ 93
EC+ K+ L R HS + DFG VG GKT N AF AI L +A GGAQ
Sbjct: 54 GECKFNKH--------LKPRPHSVSVLDFGAVGHGKTINNVAFQNAIFYLKSFADKGGAQ 105
Query: 94 LIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSS 153
VP GKWLT S N T +T+ + KDA++LAS+D W ++ LPSYGRG + GR+ S
Sbjct: 106 FNVPAGKWLTRSINFTCTYTV-LEKDAVILASEDFDHWDVVEALPSYGRGIEAQYGRYRS 164
Query: 154 LIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLID 213
LI G NLTDVV+TG N TI+GQG WW K+ N TRP+L+E + S NV ISNLTL++
Sbjct: 165 LISGNNLTDVVITGNNGTIDGQGSIWWEKFNSHSLNYTRPHLVEFVSSRNVVISNLTLLN 224
Query: 214 SPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSG 273
+P WN+ P Y SNV+IQ LT+ P DSP T+GI PDS + IE++ I G D + +KSG
Sbjct: 225 APGWNIRPAYCSNVVIQNLTVYTPQDSPFTNGIVPDSSEHVCIENSNISMGYDAIVLKSG 284
Query: 274 WDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIK 333
WDEYGI G PT ++ IRR+ S A +ALGSEMSGGI DV E + ++ G+ +K
Sbjct: 285 WDEYGISYGKPTSNVHIRRVRLQSAAGAGVALGSEMSGGISDVLVELSSLHDSLFGIELK 344
Query: 334 TAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADN 393
TA GRG ++K+I + + M ++ TG HPD +DP +LPTV+GI + D+V N
Sbjct: 345 TARGRGGFIKDILISNVVMDNLQVGIKATGYSDMHPDEKYDPSSLPTVSGITFEDIVGTN 404
Query: 394 VTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKE 453
++ + G+ PFT + W C+NI G + V+P+ C L +
Sbjct: 405 ISIAGNFTGLSESPFT-SICLSNISISISSDPSTPWLCSNISGSSKNVSPEPCPEL-QGS 462
Query: 454 PTDCF 458
+ CF
Sbjct: 463 FSSCF 467
>gi|356499323|ref|XP_003518491.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Glycine max]
Length = 445
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 176/389 (45%), Positives = 245/389 (62%), Gaps = 4/389 (1%)
Query: 49 ALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNL 108
AL R + +T+F GVG+ +T NTK F A S DGG L VPPG +LT +F+L
Sbjct: 59 ALGHRADNISITEFVGVGNERTLNTKTFREAFSTCH---XDGGTLLYVPPGVYLTETFHL 115
Query: 109 TSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGG 168
TSH TLY+ +++A+QD S WPL+ PLPSYGRGR+ P GR+ S I G + DVV+TG
Sbjct: 116 TSHRTLYLATGTIIMATQDSSNWPLIAPLPSYGRGRERPAGRYMSFIHGDGVXDVVITGE 175
Query: 169 NATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
N TI+GQG+ WW K++++ TRP L+E + S ++ ISN+ SP WN+HP SNV+
Sbjct: 176 NGTIDGQGDEWWNKWKQRTLQFTRPNLVEFVNSRDIIISNVIFKSSPFWNIHPFLCSNVV 235
Query: 229 IQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHL 288
++ +TI AP DSPNTDGI+P S +N IED+YI +GDD VA KSGWDEYGI G P+ +
Sbjct: 236 VRYVTILAPRDSPNTDGIDPHSSSNVCIEDSYISTGDDLVAEKSGWDEYGIVYGRPSSDI 295
Query: 289 IIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVR 348
IRR+ SP A IA+GSE SGG+++V +E I N G+ IKT GR Y+K I +
Sbjct: 296 TIRRVTGSSP-FAGIAIGSETSGGVENVLSEHINLYNMGIGIHIKTNTGRAGYIKNITMS 354
Query: 349 RMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPF 408
+ M+ + ++GD G HPD +DP ALP V G+ +++ V Q+ + G+ + PF
Sbjct: 355 HVYMEEARKGIRISGDVGDHPDDKYDPNALPLVKGVTIKNVWGVKVLQAGLIQGLSSXPF 414
Query: 409 TGICISNVTIKLTEKPKELQWNCTNIQGI 437
IC ++ + P+ W CT++ G
Sbjct: 415 RDICQYDINLHGVTGPRTPPWKCTDVSGF 443
>gi|414885630|tpg|DAA61644.1| TPA: hypothetical protein ZEAMMB73_326074 [Zea mays]
Length = 516
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 179/393 (45%), Positives = 250/393 (63%), Gaps = 6/393 (1%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L +FG VGDG+T NT AF +AI+ + A GG +L VP G+WLT FNLTSH TL++
Sbjct: 103 LREFGAVGDGRTVNTAAFESAIAAI---AERGGGRLTVPAGRWLTAPFNLTSHMTLFLAA 159
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A +L QDE WPL+ PLPSYG GR+ G R+ SLI G +L V +TG N TINGQG+
Sbjct: 160 GAEILGIQDERYWPLMSPLPSYGYGREHKGPRYGSLIHGQDLKHVTITGHNGTINGQGQS 219
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW+K+R+K N TR L+++M S N+ ISN+TL DSP W +H NV I TI API
Sbjct: 220 WWVKFRRKLLNHTRGPLVQLMRSSNIIISNITLRDSPFWTLHTYDCKNVTISETTILAPI 279
Query: 239 -DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
+PNTDGI+PDSC N I++ YI GDD +A+KSGWD+YGI G P+ ++ I+ ++ S
Sbjct: 280 AGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSANITIQNVVIRS 339
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
SA +++GSEMSGG+ DV E++ +++ GVRIKTA GRGAYV + + +T + ++
Sbjct: 340 MVSAGVSIGSEMSGGVSDVLVENVHVWDSRRGVRIKTAPGRGAYVTNVIYQNITFENVRV 399
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
+ DY HPD GFDPKA+PT+ I+Y + V ++ G P + +++
Sbjct: 400 GIVIKTDYNEHPDEGFDPKAVPTIGNISYTSIHGHRVRVPVRIQGSAQIPVKNVTFHDMS 459
Query: 418 IKLTEKPKELQWNCTNIQG-ITSRVTPQACELL 449
I + +K K + C+ +QG + V P C+ L
Sbjct: 460 IGIVDK-KHHVFQCSFVQGQVIGYVFPVPCKNL 491
>gi|226509250|ref|NP_001149385.1| LOC100283011 precursor [Zea mays]
gi|195626846|gb|ACG35253.1| polygalacturonase [Zea mays]
Length = 446
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 178/398 (44%), Positives = 248/398 (62%), Gaps = 2/398 (0%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLI-VPPGKWLTGSFNLTSHFTLYIH 117
+ FG GDG+T NT AF A++ +++ G L+ VPPG WLTG FNLTSH TL++
Sbjct: 46 VASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVPPGVWLTGPFNLTSHMTLFLA 105
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
+ A++ A+QD S WPL+ PLP YGRGR+ PGGR+ SLI G L DV +TG N TI+GQG
Sbjct: 106 RGAIVRATQDTSSWPLIDPLPXYGRGRELPGGRYMSLIHGHGLQDVFITGENGTIDGQGG 165
Query: 178 PWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAP 237
WW ++K+ TRP+L+E+M+S +V +SNL DSP WN+HPVY SNV+I LT+ AP
Sbjct: 166 VWWDMWKKRTLPFTRPHLLELMYSTDVVVSNLVFQDSPFWNIHPVYCSNVVIANLTVLAP 225
Query: 238 IDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
DSPNTDGI+ DS +N +ED YI +GDD +++KSGWDEYG+ G P+ + +RR+
Sbjct: 226 HDSPNTDGIDLDSSSNVCVEDCYISAGDDLISIKSGWDEYGVAFGRPSSGITVRRITGSG 285
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
P A A+GSE SGG++DV AE ++ GV +KT GRG +++ + V ++T+ +Y
Sbjct: 286 P-FAGFAVGSETSGGVEDVVAEHLSFSGVGVGVHVKTNSGRGGFIRNVTVSQVTLDGARY 344
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
+ GD G HP ++ LP V G+ R++ NV Q+ + GIR+ F+ IC+SNV
Sbjct: 345 GLRIAGDVGGHPGASYNASLLPVVDGVAVRNVWGRNVRQAGLIRGIRDSVFSNICLSNVK 404
Query: 418 IKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPT 455
+ W C + G V P C L T
Sbjct: 405 LYGIGSDSIGPWRCRAVSGSALDVQPSPCAELASTSGT 442
>gi|326532444|dbj|BAK05151.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 185/393 (47%), Positives = 252/393 (64%), Gaps = 6/393 (1%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L +FGGVGDG+T NT AF A++ +S+ GG +L VP G+WLT FNLTSH TL++
Sbjct: 117 LREFGGVGDGRTLNTAAFEAAVAAISE---RGGGRLTVPAGRWLTAPFNLTSHMTLFLAA 173
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A +L QDE WPL+ PLPSYG GR+ G R+ SLI G +L DV++TG N TINGQG+
Sbjct: 174 GAEILGVQDERYWPLMSPLPSYGYGREHKGPRYGSLIHGQDLKDVIITGHNGTINGQGQS 233
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WWIK+RKK N TR L+++M S N+ ISN+TL DSP W +H NV I G TI API
Sbjct: 234 WWIKFRKKLLNHTRGPLVQLMRSSNIIISNITLRDSPFWTLHVYDCKNVTISGTTILAPI 293
Query: 239 -DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
+PNTDGI+PDSC N IE+ YI GDD VA+KSGWD+YGI G P+ ++ IR +I S
Sbjct: 294 VGAPNTDGIDPDSCENVMIENCYISVGDDGVAIKSGWDQYGIAYGRPSTNITIRNVIIRS 353
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
SA +++GSEMSGG+ +V E++ +++ GVRIKTA GRGAYV I R +T++ ++
Sbjct: 354 MVSAGVSIGSEMSGGVSNVLVENVHIWSSRRGVRIKTAPGRGAYVNNIVYRNITLENVRV 413
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
+ DY HPD FDPKA+P I+Y + V ++ G P + +++
Sbjct: 414 GIVIKTDYNEHPDELFDPKAVPVGGNISYTSIHGQRVRVPVRIQGSAEIPVRNVTFHDMS 473
Query: 418 IKLTEKPKELQWNCTNIQG-ITSRVTPQACELL 449
+ + +K K + C+ +QG + V P C+ L
Sbjct: 474 VGILDK-KHHVFQCSFVQGQVIGYVFPVPCKNL 505
>gi|222641659|gb|EEE69791.1| hypothetical protein OsJ_29512 [Oryza sativa Japonica Group]
Length = 426
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 178/393 (45%), Positives = 251/393 (63%), Gaps = 6/393 (1%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L +FGGVGDG+T NT+AF A++++ A GG +L+VP G+WLT FNLTS TL++
Sbjct: 13 LREFGGVGDGRTLNTEAFVAAVASI---AERGGGRLVVPAGRWLTAPFNLTSRMTLFLAA 69
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A +L QDE WPL+ PLPSYG GR+ G R+ SLI G +L DV +TG N TINGQG+
Sbjct: 70 GAEILGVQDERYWPLMSPLPSYGYGREHRGPRYGSLIHGQDLKDVTITGQNGTINGQGQS 129
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW K+RKK N TR L+++M S N+ ISN+TL DSP W +H +V I TI API
Sbjct: 130 WWSKFRKKVLNHTRGPLVQLMRSSNITISNITLRDSPFWTLHIYDCKDVTISDTTILAPI 189
Query: 239 -DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
+PNTDGI+PDSC N I++ YI GDD +A+KSGWD+YGI G P+ ++II + S
Sbjct: 190 VGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHNVTIRS 249
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
SA +++GSEMSGG+ +V E++ +++ GVRIKTA GRGAYV I R +T++ ++
Sbjct: 250 MVSAGVSIGSEMSGGVSNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITLEHIRV 309
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
+ DY HPD GFDPKA+P + I+Y + V ++ G P + +++
Sbjct: 310 GIVIKTDYNEHPDEGFDPKAVPIIENISYSSIHGHGVRVPVRIQGSAEIPVKNVTFHDMS 369
Query: 418 IKLTEKPKELQWNCTNIQG-ITSRVTPQACELL 449
+ L ++ + + C+ +QG + V P C+ L
Sbjct: 370 VGLVDRKNHV-FQCSFVQGQVIGYVFPVPCKNL 401
>gi|115479361|ref|NP_001063274.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|51091349|dbj|BAD36084.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|51091399|dbj|BAD36142.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113631507|dbj|BAF25188.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|215768243|dbj|BAH00472.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 526
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 178/393 (45%), Positives = 251/393 (63%), Gaps = 6/393 (1%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L +FGGVGDG+T NT+AF A++++ A GG +L+VP G+WLT FNLTS TL++
Sbjct: 113 LREFGGVGDGRTLNTEAFVAAVASI---AERGGGRLVVPAGRWLTAPFNLTSRMTLFLAA 169
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A +L QDE WPL+ PLPSYG GR+ G R+ SLI G +L DV +TG N TINGQG+
Sbjct: 170 GAEILGVQDERYWPLMSPLPSYGYGREHRGPRYGSLIHGQDLKDVTITGQNGTINGQGQS 229
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW K+RKK N TR L+++M S N+ ISN+TL DSP W +H +V I TI API
Sbjct: 230 WWSKFRKKVLNHTRGPLVQLMRSSNITISNITLRDSPFWTLHIYDCKDVTISDTTILAPI 289
Query: 239 -DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
+PNTDGI+PDSC N I++ YI GDD +A+KSGWD+YGI G P+ ++II + S
Sbjct: 290 VGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHNVTIRS 349
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
SA +++GSEMSGG+ +V E++ +++ GVRIKTA GRGAYV I R +T++ ++
Sbjct: 350 MVSAGVSIGSEMSGGVSNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITLEHIRV 409
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
+ DY HPD GFDPKA+P + I+Y + V ++ G P + +++
Sbjct: 410 GIVIKTDYNEHPDEGFDPKAVPIIENISYSSIHGHGVRVPVRIQGSAEIPVKNVTFHDMS 469
Query: 418 IKLTEKPKELQWNCTNIQG-ITSRVTPQACELL 449
+ L ++ + + C+ +QG + V P C+ L
Sbjct: 470 VGLVDRKNHV-FQCSFVQGQVIGYVFPVPCKNL 501
>gi|218202213|gb|EEC84640.1| hypothetical protein OsI_31518 [Oryza sativa Indica Group]
Length = 526
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 177/393 (45%), Positives = 250/393 (63%), Gaps = 6/393 (1%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L +FGGVGDG+T NT+AF A++++ A GG +L+VP G+WLT FNLT+ TL++
Sbjct: 113 LREFGGVGDGRTLNTEAFVAAVASI---AERGGGRLVVPAGRWLTAPFNLTNRMTLFLAA 169
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A +L QDE WPL+ PLPSYG GR+ G R+ SLI G +L DV +TG N TINGQG+
Sbjct: 170 GAEILGVQDERYWPLMSPLPSYGYGREHRGPRYGSLIHGQDLKDVTITGQNGTINGQGQS 229
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW K+RKK N TR L+++M S N+ ISN+TL DSP W +H +V I TI API
Sbjct: 230 WWSKFRKKVLNHTRGPLVQLMRSSNITISNITLRDSPFWTLHIYDCKDVTISDTTILAPI 289
Query: 239 -DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
+PNTDGI+PDSC N I++ YI GDD +A+KSGWD+YGI G P+ ++II + S
Sbjct: 290 VGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHNVTIRS 349
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
SA +++GSEMSGG+ +V E++ +++ GVRIKTA GRGAYV I R +T++ ++
Sbjct: 350 MVSAGVSIGSEMSGGVSNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITLEHIRV 409
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
+ DY HPD GFDPKA+P + I+Y + V ++ G P + +++
Sbjct: 410 GIVIKTDYNEHPDEGFDPKAVPIIENISYSSIHGHGVRVPVRIQGSAEIPVKNVTFHDMS 469
Query: 418 IKLTEKPKELQWNCTNIQG-ITSRVTPQACELL 449
+ L ++ + + C+ +QG + V P C L
Sbjct: 470 VGLVDRRNHV-FQCSFVQGQVIGYVFPVPCRNL 501
>gi|30679999|ref|NP_850525.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|20260262|gb|AAM13029.1| unknown protein [Arabidopsis thaliana]
gi|22136514|gb|AAM91335.1| unknown protein [Arabidopsis thaliana]
gi|332640935|gb|AEE74456.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 446
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 173/404 (42%), Positives = 252/404 (62%), Gaps = 1/404 (0%)
Query: 48 QALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFN 107
++L+ R HS +TDFG VGDGKT NT AF A+ L +A GGAQL VPPG WLTGSF+
Sbjct: 34 RSLSTRPHSVSITDFGAVGDGKTLNTLAFQNAVFYLMSFADKGGAQLYVPPGHWLTGSFS 93
Query: 108 LTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG 167
LTSH TL++ A+++ASQD S W ++ PLPSYGRG D PG R+ SLI G L DVVVTG
Sbjct: 94 LTSHLTLFLENGAVIVASQDPSHWEVVDPLPSYGRGIDLPGKRYKSLINGNKLHDVVVTG 153
Query: 168 GNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNV 227
N TI+GQG WW ++ RP+LIE + S+NV +SNLT +++P+++++ +YSS+V
Sbjct: 154 DNGTIDGQGLVWWDRFTSHSLKYNRPHLIEFLSSENVIVSNLTFLNAPAYSIYSIYSSHV 213
Query: 228 LIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQH 287
I + + SP T GI PDS I+++ I G D +++KSGWDEYGI PT++
Sbjct: 214 YIHKILAHSSPKSPYTIGIVPDSSDYVCIQNSTINVGYDAISLKSGWDEYGIAYSRPTEN 273
Query: 288 LIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYV 347
+ IR + ++I+ GSEMSGGI DV ++ + +G+ +T GRG Y+KEI +
Sbjct: 274 VHIRNVYLRGASGSSISFGSEMSGGISDVVVDNAHIHYSLTGIAFRTTKGRGGYIKEIDI 333
Query: 348 RRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDP 407
+ M + G +GSHPD +D ALP V+ I ++ +N+ + KL GI+ P
Sbjct: 334 SNIDMLRIGTAIVANGSFGSHPDDKYDVNALPLVSHIRLSNISGENIGIAGKLFGIKESP 393
Query: 408 FTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPK 451
F+ + +SNV++ ++ + W C+ + G + V P+ C L +
Sbjct: 394 FSSVTLSNVSLSMSSG-SSVSWQCSYVYGSSESVIPEPCPELKR 436
>gi|357442057|ref|XP_003591306.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355480354|gb|AES61557.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 601
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 163/351 (46%), Positives = 234/351 (66%), Gaps = 9/351 (2%)
Query: 111 HFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNA 170
H+ + +A+L Q+ +WP++ PLPSYGRGR+ PGGR SLI+G NLTDV++TG N
Sbjct: 227 HYDIVCETNAVLCLLQNSEDWPVVDPLPSYGRGRELPGGRHRSLIYGCNLTDVIITGNNG 286
Query: 171 TINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQ 230
TI+GQG WW K+R K + TRP+L+E++ S V ISN T ++SP W +HPVY SNV +Q
Sbjct: 287 TIDGQGSIWWSKFRNKTLDHTRPHLVELINSTEVLISNATFLNSPFWTIHPVYCSNVTVQ 346
Query: 231 GLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLII 290
+TI P SPNTDGI+PDS N IED YI +GDD +++KSGWDEYGI G P+ ++ I
Sbjct: 347 NVTIIVPFGSPNTDGIDPDSSDNVCIEDCYISTGDDLISIKSGWDEYGISFGRPSTNISI 406
Query: 291 RRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRM 350
RL SA IA+GSEMSGG+ +V AEDI +++S +RIKT+ GRG YV+ +Y+ M
Sbjct: 407 HRLTG-RTTSAGIAIGSEMSGGVSEVYAEDIYIFDSKSAIRIKTSPGRGGYVRNVYISNM 465
Query: 351 TMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTG 410
T+ + TG YG HPD +D ALP + I +++ +N+ ++ + GI+ D F
Sbjct: 466 TLINVDIAIRFTGLYGEHPDDSYDRDALPVIERITVVNVIGENIKRAGLIQGIKGDNFVD 525
Query: 411 ICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTDCFFPD 461
IC+SN+T+ ++ K WNC++++G + V+P++CE L ++ FPD
Sbjct: 526 ICLSNITLNVS---KNNPWNCSDVKGYSELVSPESCEQLNER-----IFPD 568
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 54/73 (73%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +T+FG VGDG T NTKAF AI L+ YA GGA+L VP G+WLTGSF+L SH
Sbjct: 78 RPHSVSITEFGAVGDGITLNTKAFQNAIFYLNSYADKGGAKLFVPAGRWLTGSFDLISHL 137
Query: 113 TLYIHKDALLLAS 125
TL++ KDA++L S
Sbjct: 138 TLWLDKDAVILGS 150
>gi|8954055|gb|AAF82228.1|AC069143_4 Contains similarity to a polygalacturonase-like protein gi|7529266
from Arabidopsis thaliana BAC F18P9 gb|AL138654 and
contains multiple polygalacturonase (pectinase) PF|00295
domains [Arabidopsis thaliana]
Length = 533
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 175/419 (41%), Positives = 259/419 (61%), Gaps = 31/419 (7%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGA-QLIVPPGKWLTGSFNLTSHFTLYIH 117
L DFGGVGDG T NT+AF A+ ++SK G QL VPPG+WLT FNLTSH TL++
Sbjct: 89 LKDFGGVGDGFTLNTEAFERAVISISKLGGSSGGGQLNVPPGRWLTAPFNLTSHMTLFLA 148
Query: 118 KDALLLA---------------------------SQDESEWPLLPPLPSYGRGRDEPGGR 150
+D+ +L QDE WPL+PPLPSYG GR+ PG R
Sbjct: 149 EDSEILGVEEHNLGDFETLRDGCVRLVYLTCHFNCQDEKYWPLMPPLPSYGYGRERPGPR 208
Query: 151 FSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLT 210
+ SLI G NL D+V+TG N TINGQG+ WW K++++ N TR L+++M+S ++ I+N+T
Sbjct: 209 YGSLIHGQNLKDIVITGHNGTINGQGQSWWKKHQRRLLNYTRGPLVQIMWSSDIVIANIT 268
Query: 211 LIDSPSWNVHPVYSSNVLIQGLTIRAPI-DSPNTDGINPDSCTNTRIEDNYIVSGDDCVA 269
+ DSP W +HP NV I+ +TI AP+ +PNTDGI+PDSC + IED YI +GDD +A
Sbjct: 269 MRDSPFWTLHPYDCKNVTIRNVTILAPVTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIA 328
Query: 270 VKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSG 329
+KSGWD++GI G P+ +++IR L+ S SA +++GSEMSGGI +V E++ N++ G
Sbjct: 329 IKSGWDQFGIAYGRPSTNILIRNLVVRSVISAGVSIGSEMSGGISNVTIENLLIWNSRRG 388
Query: 330 VRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDM 389
+RIKTA GRG Y++ I + +T+ ++ + DY H D +D KA P ++G ++ +
Sbjct: 389 IRIKTAPGRGGYIRNITYKNLTLDNVRVGIVIKTDYNEHADDNYDRKAYPILSGFSFAGI 448
Query: 390 VADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQG-ITSRVTPQACE 447
V ++ G P + ++++ LT K K + + C+ ++G + + P+ CE
Sbjct: 449 HGQGVRVPVRIHGSEQIPVRNVTFRDMSVGLTYKKKHI-FQCSFVKGRVFGSIFPRPCE 506
>gi|413948635|gb|AFW81284.1| hypothetical protein ZEAMMB73_960645 [Zea mays]
Length = 458
Score = 344 bits (882), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 178/410 (43%), Positives = 249/410 (60%), Gaps = 14/410 (3%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLI-VPPGKWLTGSFNLTSHFTLYIH 117
+ FG GDG+T NT AF A++ +++ G L+ VPPG WLTG FNLTSH TL++
Sbjct: 46 VASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVPPGVWLTGPFNLTSHMTLFLA 105
Query: 118 KDAL------------LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVV 165
+ A+ L++ QD S WPL+ PLPSYGRGR+ PGGR+ SLI G L DV +
Sbjct: 106 RGAIVRATQPCLATIELISEQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGHGLQDVFI 165
Query: 166 TGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSS 225
TG N TI+GQG WW ++K+ TRP+L+E+M+S +V +SNL DSP WN+HPVY S
Sbjct: 166 TGENGTIDGQGGVWWDMWKKRTLPFTRPHLLELMYSTDVVVSNLVFQDSPFWNIHPVYCS 225
Query: 226 NVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPT 285
NV+I LT+ AP DSPNTDGI+ DS +N +ED YI +GDD +++KSGWDEYG+ G P+
Sbjct: 226 NVVIANLTVLAPHDSPNTDGIDLDSSSNVCVEDCYISAGDDLISIKSGWDEYGVAFGRPS 285
Query: 286 QHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEI 345
+ +RR+ P A A+GSE SGG++DV AE ++ GV +KT GRG +++ +
Sbjct: 286 SGITVRRITGSGP-FAGFAVGSETSGGVEDVVAEHLSFSGVGVGVHVKTNSGRGGFIRNV 344
Query: 346 YVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRN 405
V ++T+ +Y + GD G HP ++ LP + G+ R++ NV Q+ + GIR+
Sbjct: 345 TVSQVTLDGARYGLRIAGDVGGHPGASYNASLLPVIDGVAVRNVWGRNVRQAGLIRGIRD 404
Query: 406 DPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPT 455
F+ IC+SNV + W C + G V P C L T
Sbjct: 405 SVFSNICLSNVKLYGIGSDSIGPWRCRAVSGSALDVQPSPCAELASTSGT 454
>gi|255641025|gb|ACU20792.1| unknown [Glycine max]
Length = 243
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 164/246 (66%), Positives = 199/246 (80%), Gaps = 4/246 (1%)
Query: 1 MEFCLKSRNNILHPHVIKILSTLLTLGLLSPQVAECRPTKNSYT-IEFQALNCRKHSAVL 59
ME K + VI+++ +L + LLS +VAE R K T +++A+NCR HSA L
Sbjct: 1 MELLWKDHMRV---QVIRLVCAVLLVTLLSSEVAESRKVKTVGTSFKYEAINCRTHSASL 57
Query: 60 TDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKD 119
TDFGGVGDGKTSNTKAF +AIS+LS+YA+ GGAQL VP GKWLTGSF+L SHFTLY++KD
Sbjct: 58 TDFGGVGDGKTSNTKAFQSAISHLSQYASKGGAQLYVPAGKWLTGSFSLISHFTLYLNKD 117
Query: 120 ALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPW 179
A+LLASQD SEWP + PLPSYGRGRD P GR++SLIFGTNLTDV+VTGGN TI+GQG W
Sbjct: 118 AVLLASQDISEWPAIEPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGGNGTIDGQGAFW 177
Query: 180 WIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPID 239
W K+ KK+ TRPYLIE+MFSD +QISNLTL++SPSWN+HPVYSSN++I+GLTI AP+
Sbjct: 178 WQKFHKKKLKYTRPYLIELMFSDQIQISNLTLLNSPSWNLHPVYSSNIIIKGLTIIAPVP 237
Query: 240 SPNTDG 245
SPNTDG
Sbjct: 238 SPNTDG 243
>gi|357158595|ref|XP_003578178.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 532
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 181/393 (46%), Positives = 250/393 (63%), Gaps = 6/393 (1%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L +FGG+GDG+T NT AF A++ +S+ GG +L VP G+WLT FNLTS TL++
Sbjct: 119 LREFGGIGDGRTLNTAAFEAAVAAISE---RGGGRLTVPAGRWLTAPFNLTSGMTLFLAS 175
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A +L QDE WPL+PPLPSYG GR+ G R+ SLI G +L DV VTG N TINGQG+
Sbjct: 176 GAEILGIQDERYWPLMPPLPSYGYGREHKGPRYGSLIHGQDLKDVTVTGHNGTINGQGKS 235
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW K+R+K N TR L+++M S N+ ISN+TL DSP W +H NV I TI API
Sbjct: 236 WWTKFRRKLLNHTRGPLVQLMRSSNIIISNITLQDSPFWTLHTYDCKNVTISETTILAPI 295
Query: 239 -DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
+PNTDGI+PDSC N I++ YI GDD VA+KSGWD+YGI G P+ ++ IR + S
Sbjct: 296 VGAPNTDGIDPDSCENVMIQNCYISVGDDGVAIKSGWDQYGIAYGRPSTNITIRDVTIRS 355
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
SA +++GSEMSGG+ +V E++ +++ GVRIKTA GRGAYV I R +T++ ++
Sbjct: 356 MVSAGVSIGSEMSGGVSNVLVENVHIWSSRRGVRIKTAPGRGAYVNNIVYRNITLENVRV 415
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
+ DY HPD GF+PKA+P V I+Y + V ++ G P + +++
Sbjct: 416 GIVIKTDYNEHPDEGFNPKAVPIVGNISYTSIHGQGVRVPVRIQGSAEIPVKNVTFHDMS 475
Query: 418 IKLTEKPKELQWNCTNIQG-ITSRVTPQACELL 449
+ + +K K + C+ +QG + V P C+ L
Sbjct: 476 VGILDK-KHHVFQCSYVQGQVIGYVFPVPCKNL 507
>gi|109509132|gb|ABG34275.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 238
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 161/232 (69%), Positives = 189/232 (81%), Gaps = 1/232 (0%)
Query: 243 TDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAA 302
TDG++PDSCTNTRIED +IVSGDDCVAVKSGWDEYGI GMPT+ L+IRRL CISP SA
Sbjct: 1 TDGVDPDSCTNTRIEDVHIVSGDDCVAVKSGWDEYGISYGMPTKQLVIRRLTCISPYSAM 60
Query: 303 IALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMT 362
IALGSEMSGGI+DVRAEDITAINT+SG+RIKTA+GRG YVK+IYVR M M TMK+ FWM
Sbjct: 61 IALGSEMSGGIEDVRAEDITAINTESGIRIKTAMGRGGYVKDIYVRGMKMHTMKWAFWMD 120
Query: 363 GDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTE 422
G+YGSHPDP +DPKA P +TGINYRD+VA+NVT A+L GI +PFTGICISN TI +
Sbjct: 121 GNYGSHPDPHYDPKARPIITGINYRDIVAENVTMVAQLKGIPGNPFTGICISNATITMAP 180
Query: 423 KPKELQWNCTNIQGITSRVTPQACELLPKKEPTDCFFPDDKLPIDDVRLNTC 474
+ K+ W C++I GITS VTPQ C +LP E T C FP+ LPI++V+ C
Sbjct: 181 ESKKEPWTCSDIHGITSGVTPQPCGMLP-AETTTCHFPERSLPIEEVKFKKC 231
>gi|109509136|gb|ABG34277.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 242
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 163/240 (67%), Positives = 193/240 (80%), Gaps = 3/240 (1%)
Query: 243 TDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAA 302
TDGINPDSCTN RIED YIVSGDDCVAVKSGWDEYGI GMPTQ LIIRRL CISP SA
Sbjct: 1 TDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIAFGMPTQQLIIRRLTCISPYSAT 60
Query: 303 IALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMT 362
IALGSEMSGGI+DVRAEDI AINT+SG+RIKTAVGRGAY+K+IYV++MTM TMK+ F M
Sbjct: 61 IALGSEMSGGIRDVRAEDIVAINTESGIRIKTAVGRGAYIKDIYVKKMTMHTMKWAFKMD 120
Query: 363 GDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTE 422
GDY SHPD +DP ALP + INYRDMVA+NV+ +A+ +GI D FTGIC++NVT+ +T
Sbjct: 121 GDYKSHPDNKYDPNALPVIQNINYRDMVAENVSVAARFNGIAGDKFTGICMANVTLGMTA 180
Query: 423 KPKELQWNCTNIQGITSRVTPQACELLPKKEP---TDCFFPDDKLPIDDVRLNTCSASIS 479
K K+ W CT++QG+TS VTP C+ LP + P + C FP + LPID+V+L CS S+S
Sbjct: 181 KHKKYPWTCTDVQGMTSGVTPPPCDSLPDQGPEKISACDFPANSLPIDEVQLKQCSYSMS 240
>gi|297801376|ref|XP_002868572.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314408|gb|EFH44831.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 189/398 (47%), Positives = 253/398 (63%), Gaps = 4/398 (1%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNL-SKYAADGGAQLIVPPGKWLTGSFNLTSH 111
R + DFG VGDGKT NT AFNTAI + + + G L VP G +LT SFNLTSH
Sbjct: 41 RTEMLSIFDFGAVGDGKTLNTNAFNTAIDRIRNSNNSSQGTLLHVPRGVYLTQSFNLTSH 100
Query: 112 FTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNAT 171
TLY+ A++ A QD +W L PLPSYGRGR+ PG R+ S I G L DVV+TG N T
Sbjct: 101 MTLYLADGAVIKAVQDTGKWRLTDPLPSYGRGRERPGRRYISFIHGDGLNDVVITGRNGT 160
Query: 172 INGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQG 231
I+GQGEPWW +R TRP LIE S N+ +S++ L +S W +HPVY SNV++
Sbjct: 161 IDGQGEPWWNMWRHGTLEFTRPGLIEFKNSTNIVVSHVVLQNSAFWTLHPVYCSNVVVHH 220
Query: 232 LTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIR 291
+TI AP DS NTDGI+PDS +N IED+YI +GDD VAVKSGWDEYGI +P++ + IR
Sbjct: 221 VTILAPTDSFNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYNLPSRDITIR 280
Query: 292 RLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMT 351
R+ SP A IA+GSE SGGI++V E+IT N+ G+ IKT +GRG ++ I + +
Sbjct: 281 RITGSSP-FAGIAIGSETSGGIQNVTVENITLYNSGIGIHIKTNIGRGGSIQGITISGVY 339
Query: 352 MKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGI 411
++ ++ ++GD G HPD F+ ALP V GI +++ V ++ + G+++ PFT +
Sbjct: 340 LEKVRTGIKISGDTGDHPDDKFNTSALPIVRGITIKNVWGIKVERAGMVQGLKDSPFTNL 399
Query: 412 CISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL 449
C SNVT LT W C+++ G S+V P C L
Sbjct: 400 CFSNVT--LTGTKSTPIWKCSDVVGAASKVNPTPCPEL 435
>gi|224034791|gb|ACN36471.1| unknown [Zea mays]
Length = 347
Score = 317 bits (812), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 157/338 (46%), Positives = 213/338 (63%), Gaps = 3/338 (0%)
Query: 112 FTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNAT 171
TL++ + A+L A+QD WPL+ PLPSYGRGR+ PG R++S I G L DVV+TG
Sbjct: 1 MTLFLARGAVLKATQDTRGWPLVEPLPSYGRGRELPGPRYASFIHGDGLRDVVITGDRGV 60
Query: 172 INGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQG 231
I+GQGE WW +R++ TRP L+E M S + ISN+ L +SP WN+HPVY NV++
Sbjct: 61 IDGQGEVWWNMWRRRTLEHTRPNLVEFMHSTGIHISNIVLKNSPFWNIHPVYCDNVVVTN 120
Query: 232 LTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIR 291
+ I AP DSPNTDG++PDS +N IED+YI +GDD VA+KSGWDEYGI G P+ + +R
Sbjct: 121 MMILAPRDSPNTDGVDPDSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSAGVTVR 180
Query: 292 RLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMT 351
R+ SP S IA+GSE SGG++DV ED ++ G+ IKT VGRG Y++ + V +
Sbjct: 181 RVRGSSPFS-GIAIGSEASGGVRDVLVEDCAIFDSGYGIHIKTNVGRGGYIRNVTVDGVR 239
Query: 352 MKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGI 411
+ ++ + GD G HPD F A+PTV + ++ NV Q L+GIR PFT I
Sbjct: 240 LTGVRSGVRIAGDVGDHPDAHFSQLAVPTVDAVRISNVWGVNVQQPGSLEGIRASPFTRI 299
Query: 412 CISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL 449
C+SNV KL + W C +++G V P C L
Sbjct: 300 CLSNV--KLFGWRSDAAWKCRDVRGAALGVQPSPCAEL 335
>gi|125571200|gb|EAZ12715.1| hypothetical protein OsJ_02632 [Oryza sativa Japonica Group]
Length = 419
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 163/381 (42%), Positives = 227/381 (59%), Gaps = 29/381 (7%)
Query: 69 KTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDE 128
+T +T AF A++++ + A GGA L VPPG WLTG FNLTSH TL++ + A++ A+QD
Sbjct: 55 RTLSTAAFQAAVASIERRRAPGGALLYVPPGVWLTGPFNLTSHMTLFLARGAVIRATQDT 114
Query: 129 SEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQF 188
S WPL+ PLPSYGRGR+ PGGR+ SLI G L DVV+TG N TI+GQG WW ++K
Sbjct: 115 SSWPLIEPLPSYGRGRELPGGRYMSLIHGNGLQDVVITGDNGTIDGQGSAWWDMWKKGTL 174
Query: 189 NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINP 248
TRP+L+E+M S +V +SN+ DSP WN+HPVY S
Sbjct: 175 PFTRPHLLELMNSSDVVVSNVVFQDSPFWNIHPVYCS----------------------- 211
Query: 249 DSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSE 308
+N IED YI +GDD +A+KSGWDEYG+ G P+ H+ IRR+ SP A A+GSE
Sbjct: 212 ---SNVCIEDCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRRITGSSP-FAGFAVGSE 267
Query: 309 MSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSH 368
SGG++ V AE + ++ G+ IKT GRG +++ + V +T+ +++Y + GD G H
Sbjct: 268 TSGGVEHVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGH 327
Query: 369 PDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQ 428
PD +D ALP V G+ +++ N+ ++ + GI F+ IC+SNV KL
Sbjct: 328 PDDRYDRNALPVVDGLTIKNVQGQNIREAGSIKGIATSAFSRICLSNV--KLNGGAAVRP 385
Query: 429 WNCTNIQGITSRVTPQACELL 449
W C + G V P C L
Sbjct: 386 WKCEAVSGAALDVQPSPCTEL 406
>gi|71535025|gb|AAZ32910.1| polygalacturonase-like protein [Medicago sativa]
Length = 206
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 151/206 (73%), Positives = 178/206 (86%)
Query: 47 FQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSF 106
+ ALNCR HS L DFGGVGDGKTSNTKAF +AIS+LS+ A++GG+QL VP GKWLTGSF
Sbjct: 1 YSALNCRAHSVSLKDFGGVGDGKTSNTKAFKSAISHLSQNASEGGSQLYVPAGKWLTGSF 60
Query: 107 NLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVT 166
+L SHFTLY+HKDA+LLASQD +EWP++ PLPSYGRGRD GR +SLIFGTNLTDV+VT
Sbjct: 61 SLISHFTLYLHKDAVLLASQDINEWPVIKPLPSYGRGRDAAAGRHTSLIFGTNLTDVIVT 120
Query: 167 GGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSN 226
G N TI+GQG WW ++ K+ TRPYLIE+MFSDN+QISNLTL+DSPSWN+HPVYSSN
Sbjct: 121 GDNGTIDGQGSFWWQQFHNKKLKYTRPYLIELMFSDNIQISNLTLLDSPSWNIHPVYSSN 180
Query: 227 VLIQGLTIRAPIDSPNTDGINPDSCT 252
++I+G+TI API SPNTDGINPDSCT
Sbjct: 181 IIIKGITIIAPIRSPNTDGINPDSCT 206
>gi|167523647|ref|XP_001746160.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775431|gb|EDQ89055.1| predicted protein [Monosiga brevicollis MX1]
Length = 464
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 171/415 (41%), Positives = 240/415 (57%), Gaps = 14/415 (3%)
Query: 45 IEFQALNCRKHSAV---LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKW 101
+ F+A ++H LT FG +GDG+ +N+ A A+ + + GG + +PPG +
Sbjct: 59 MRFEARVPQEHQERVFNLTAFGAIGDGRHNNSLAMAAALEAVQQ---SGGGTIYIPPGDF 115
Query: 102 LTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLT 161
L FN+TSH LY+ ++L A+ ++WP++PP+PSYG+GRD PG R +S + G NLT
Sbjct: 116 LLAPFNMTSHLVLYLEAGSILRATDRLADWPIIPPMPSYGQGRDHPGPRHASFLHGFNLT 175
Query: 162 DVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHP 221
DV VTG N TIN G+ WW ++ TR +L EVM+S +++S+LTL SP W VHP
Sbjct: 176 DVTVTGNNGTINATGDIWWARHNNGTEVYTRGHLYEVMWSRQLEVSHLTLTHSPFWTVHP 235
Query: 222 VYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKV 281
VYS + LTI P SPNTDG++PDS + I D Y +GDD VA+KSGWD YG V
Sbjct: 236 VYSQDFRAIDLTILNPPYSPNTDGVDPDSTRDVVIRDCYFSTGDDSVAIKSGWDVYGYTV 295
Query: 282 GMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAY 341
+ + ++ I + SP++A I LGSEMSGGI +V A +IT G RIKT +GRG Y
Sbjct: 296 NISSNNITIENCVFHSPNAAGICLGSEMSGGIANVFARNITMTGCLQGFRIKTGMGRGGY 355
Query: 342 VKEIYVRRMTMK-TMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKL 400
V + V + ++ +++ G YG HP G++P A P V I+ + N TQ A+L
Sbjct: 356 VVNVTVEDVVIENSIQLAVGYNGHYGGHP-AGYNPLATPHVYNISLINARGGNNTQIAEL 414
Query: 401 DGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQAC-ELLPKKEP 454
G+ N F + NV I + W C++I G VTP AC L P P
Sbjct: 415 VGLPNSQFRALRFQNVHITGKQG-----WTCSDISGTAQNVTPAACPSLAPMPTP 464
>gi|357479389|ref|XP_003609980.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355511035|gb|AES92177.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 563
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 150/331 (45%), Positives = 218/331 (65%), Gaps = 3/331 (0%)
Query: 123 LASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIK 182
+A DE WPL+PPLPSYG GR+ PG R+ SLI G NL DVV+TG N TINGQG+ WW K
Sbjct: 211 IADPDEKYWPLMPPLPSYGYGRERPGPRYGSLIHGQNLKDVVITGHNGTINGQGQAWWKK 270
Query: 183 YRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI-DSP 241
+R+K+ N TR L+++M+S ++ I+++TL DSP W +HP N+ I+G+TI AP+ ++P
Sbjct: 271 FRQKRLNYTRGPLLQIMWSSDIVITDITLRDSPFWTLHPYDCKNLTIKGVTILAPVFEAP 330
Query: 242 NTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSA 301
NTDGI+PDSC + IED YI GDD +A+KSGWD+YGI G P+ +++IR L+ S SA
Sbjct: 331 NTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIMIRNLVVRSMVSA 390
Query: 302 AIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWM 361
I++GSEMSGGI +V E++ +++ GVRIKTA GRG YV++I R +T + ++ M
Sbjct: 391 GISIGSEMSGGISNVTVENLLVWDSRRGVRIKTAPGRGGYVRQITYRNITFENVRVGIVM 450
Query: 362 TGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLT 421
DY HPD G+DP ALP + I++ ++ V ++ G P + ++++ LT
Sbjct: 451 KTDYNEHPDDGYDPTALPVIRDISFTNVYGHGVRVPVRIHGSEEIPVRNVTFRDMSVGLT 510
Query: 422 EKPKELQWNCTNIQG-ITSRVTPQACELLPK 451
K K + + C + G + + P CE L +
Sbjct: 511 YKKKHI-FQCAFVHGRVIGTIFPSPCENLDR 540
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Query: 51 NCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTS 110
N R LTDFGGVGDG T NT+AF A+S +SK+ GGAQL VPPG+WLT FNLTS
Sbjct: 68 NMRPVVFNLTDFGGVGDGVTLNTEAFERAVSAISKFGKKGGAQLNVPPGRWLTAPFNLTS 127
Query: 111 HFTLYIHKDALLLASQDESEW 131
H TL++ +DA++LA D W
Sbjct: 128 HITLFLAQDAVILAI-DRENW 147
>gi|320166922|gb|EFW43821.1| polygalacturonase [Capsaspora owczarzaki ATCC 30864]
Length = 448
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 158/405 (39%), Positives = 240/405 (59%), Gaps = 9/405 (2%)
Query: 50 LNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLT 109
L R S + D+G VGD T NT FN ++ + AA+G ++ +PPG +++G+FNLT
Sbjct: 49 LPVRSKSFNIVDYGAVGDNVTVNTAVFNKIVALV---AANGDGEIYIPPGIFVSGTFNLT 105
Query: 110 SHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRD-EPGGRFSSLIFGTNLTDVVVTG- 167
SH TL + A+L S + ++ ++P LPSYGRGR+ E R+SSL+ G NL DVV+T
Sbjct: 106 SHVTLRLASGAVLAGSPNFADHEIIPALPSYGRGRETESIFRYSSLVHGENLDDVVITSD 165
Query: 168 -GNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSN 226
G I+G G WW +R TR +L+E+M++ ++ + N+ L +SP W +HP S+N
Sbjct: 166 NGQGVIDGNGMGWWAAHRASNLTYTRGHLVELMYTTDIMLVNVELRNSPFWTIHPYSSTN 225
Query: 227 VLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQ 286
VL+ +TI P+DSPNTDG +PDSC I++ GDDC+AVKSGWD GI+ G+PT
Sbjct: 226 VLVSNVTINNPLDSPNTDGCDPDSCNQVVIQNCVFTVGDDCIAVKSGWDNPGIQYGVPTT 285
Query: 287 HLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIY 346
++IR + +P SAAIA+GSEMSGG+ ++ A+DI A N SG+R+K+A GRG Y++ +
Sbjct: 286 DVVIRNMTMHTPTSAAIAIGSEMSGGVSNLLAQDIRAFNCSSGIRLKSARGRGGYLRNLT 345
Query: 347 VRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRND 406
+T+ +K + YG H +DP A+P + I ++V +T G+ +
Sbjct: 346 FDGVTLNDVKTALSINDFYGQHESIFYDPLAVPIIDSIFMSNIVGTAITIPGDFQGLFDA 405
Query: 407 PFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPK 451
T + ISNV++ + + C+ G V P C+ +
Sbjct: 406 KITNVAISNVSLAVVGSGS---YTCSYATGTQHAVVPVLCDAFAR 447
>gi|21593399|gb|AAM65366.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 154/366 (42%), Positives = 228/366 (62%), Gaps = 1/366 (0%)
Query: 86 YAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRD 145
+A GGAQL VPPG WLTGSF+LTSH TL++ DA+++ASQD S W ++ PLPSYGRG D
Sbjct: 3 FADKGGAQLYVPPGHWLTGSFSLTSHLTLFLENDAVIVASQDPSHWEVVDPLPSYGRGID 62
Query: 146 EPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQ 205
PG R+ SLI G L DVVVTG N TI+GQG WW ++ RP+LIE + S+NV
Sbjct: 63 LPGKRYKSLINGNKLHDVVVTGDNGTIDGQGLVWWDRFTSHSLKYNRPHLIEFLSSENVI 122
Query: 206 ISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGD 265
+SNLT +++P+++++ +YSS+V I + + SP T GI PDS I+++ I G
Sbjct: 123 VSNLTFLNAPAYSIYSIYSSHVYIHKILAHSSPKSPYTIGIVPDSSDYVCIQNSTINVGY 182
Query: 266 DCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN 325
D +++KSGWDEYGI PT+++ IR + ++I+ GSEMSGGI DV ++
Sbjct: 183 DAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSEMSGGISDVVVDNAHIHY 242
Query: 326 TQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGIN 385
+ +G+ +T GRG Y+KEI + + M + G +GSHPD +D ALP V+ I
Sbjct: 243 SLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAIVANGSFGSHPDDKYDVNALPLVSHIR 302
Query: 386 YRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQA 445
++ +N+ + KL GI+ PF+ + +SNV++ ++ + W C+ + G + V P+
Sbjct: 303 LSNISGENIGIAGKLFGIKESPFSSVTLSNVSLSMSSG-SSVSWQCSYVYGSSESVIPEP 361
Query: 446 CELLPK 451
C L +
Sbjct: 362 CPELKR 367
>gi|18397713|ref|NP_566292.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|30680007|ref|NP_850526.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|7549636|gb|AAF63821.1| unknown protein [Arabidopsis thaliana]
gi|332640933|gb|AEE74454.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332640934|gb|AEE74455.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 307 bits (787), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 153/366 (41%), Positives = 227/366 (62%), Gaps = 1/366 (0%)
Query: 86 YAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRD 145
+A GGAQL VPPG WLTGSF+LTSH TL++ A+++ASQD S W ++ PLPSYGRG D
Sbjct: 3 FADKGGAQLYVPPGHWLTGSFSLTSHLTLFLENGAVIVASQDPSHWEVVDPLPSYGRGID 62
Query: 146 EPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQ 205
PG R+ SLI G L DVVVTG N TI+GQG WW ++ RP+LIE + S+NV
Sbjct: 63 LPGKRYKSLINGNKLHDVVVTGDNGTIDGQGLVWWDRFTSHSLKYNRPHLIEFLSSENVI 122
Query: 206 ISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGD 265
+SNLT +++P+++++ +YSS+V I + + SP T GI PDS I+++ I G
Sbjct: 123 VSNLTFLNAPAYSIYSIYSSHVYIHKILAHSSPKSPYTIGIVPDSSDYVCIQNSTINVGY 182
Query: 266 DCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN 325
D +++KSGWDEYGI PT+++ IR + ++I+ GSEMSGGI DV ++
Sbjct: 183 DAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSEMSGGISDVVVDNAHIHY 242
Query: 326 TQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGIN 385
+ +G+ +T GRG Y+KEI + + M + G +GSHPD +D ALP V+ I
Sbjct: 243 SLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAIVANGSFGSHPDDKYDVNALPLVSHIR 302
Query: 386 YRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQA 445
++ +N+ + KL GI+ PF+ + +SNV++ ++ + W C+ + G + V P+
Sbjct: 303 LSNISGENIGIAGKLFGIKESPFSSVTLSNVSLSMSSG-SSVSWQCSYVYGSSESVIPEP 361
Query: 446 CELLPK 451
C L +
Sbjct: 362 CPELKR 367
>gi|109509138|gb|ABG34278.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 307
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 139/286 (48%), Positives = 196/286 (68%), Gaps = 9/286 (3%)
Query: 176 GEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIR 235
G WW ++R K + TRP+L+E+M S V ISNLT ++SP W +HP+Y S+V++Q +TIR
Sbjct: 1 GSMWWERFRNKTLDYTRPHLVELMNSTGVVISNLTFLNSPFWTIHPIYCSHVIVQNVTIR 60
Query: 236 APIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLIC 295
AP+DSPNTDGI+PDS + IED YI +GDD +A+KSGWDEYGI G P++++IIRRLI
Sbjct: 61 APLDSPNTDGIDPDSSDDVCIEDCYISTGDDVIAIKSGWDEYGISYGRPSKNIIIRRLIG 120
Query: 296 ISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTM 355
S+ IA+GSEMSGG+ DV AEDI N+ +G+RIKT+ GRG YV+ I++ +++ +
Sbjct: 121 -ETHSSGIAIGSEMSGGVSDVHAEDIVFFNSTTGIRIKTSPGRGGYVRNIFISNVSLANV 179
Query: 356 KYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISN 415
K TG YG HPD +DPKA+P + I ++D+ +N+T + ++GI D F IC+ N
Sbjct: 180 KVAIRFTGRYGEHPDESYDPKAMPKIERITFKDIHGENITVAGLMEGIEGDNFINICLYN 239
Query: 416 VTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTDCFFPD 461
+T+ + WNC+N+QG +S V PQ CELL + FPD
Sbjct: 240 ITLSVNSISP---WNCSNVQGFSSLVFPQTCELLEES-----IFPD 277
>gi|125583899|gb|EAZ24830.1| hypothetical protein OsJ_08610 [Oryza sativa Japonica Group]
Length = 489
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 144/326 (44%), Positives = 215/326 (65%), Gaps = 3/326 (0%)
Query: 126 QDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRK 185
+DE WPL+P LPSYG GR+ G RF SLI G NL DVV+TG N +INGQGE WW+K+R+
Sbjct: 113 RDERYWPLMPALPSYGYGRERKGPRFGSLIHGQNLKDVVITGHNGSINGQGEVWWMKHRR 172
Query: 186 KQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDS-PNTD 244
+ N TRP L+++M+S ++ ++N+TL +SP W+ HP +N+ + +TI API S PNTD
Sbjct: 173 RILNNTRPPLLQLMWSKDIIVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTD 232
Query: 245 GINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIA 304
GI+PDSC + IE+ YI GDD +AVKSGWD+YGI G P+++++IR ++ S SA I+
Sbjct: 233 GIDPDSCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGIS 292
Query: 305 LGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGD 364
+GSEMSGGI +V ED+ ++ G+RIKTA+GRG Y+++I R +T ++ + D
Sbjct: 293 IGSEMSGGIANVTVEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVD 352
Query: 365 YGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKP 424
Y H D G+D A P +T I+++++ V + G + P I +++I ++ K
Sbjct: 353 YNEHADDGYDRDAFPDITNISFKEIHGRGVRVPVRAHGSSDIPIKDISFQDMSIGISYKK 412
Query: 425 KELQWNCTNIQG-ITSRVTPQACELL 449
K + + C+ I+G + V P+ CE L
Sbjct: 413 KHI-FQCSFIEGRVIGSVFPKPCENL 437
>gi|223949035|gb|ACN28601.1| unknown [Zea mays]
Length = 376
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 140/285 (49%), Positives = 193/285 (67%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +T+FG VGDG+T NT F A+ + +A GGAQL VP G+WLTGSFNLTSH
Sbjct: 40 RPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTGSFNLTSHL 99
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TLY+ + A+++ ++D S+W ++ PLPSYG+G D PG R SLI G NLTDVV+TG N I
Sbjct: 100 TLYLEEGAVIVGAKDSSQWLIVEPLPSYGQGLDLPGPRHQSLISGYNLTDVVITGNNGVI 159
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW R + N +RP L+E ++S+++ ISNLT ++SP+W++HPVY SNV + +
Sbjct: 160 DGQGLVWWQWLRSHELNHSRPNLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNVKVHNV 219
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TI+ +D+P TDGI PDSC+N IED+ I + +++KSGWD YGI G PT + I R
Sbjct: 220 TIKTSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISR 279
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVG 337
+ +S AA+A GSEMSGGI D+ + ++ G + VG
Sbjct: 280 VDLLSSSGAALAFGSEMSGGISDIHVNHLRIHDSSKGPPEEVLVG 324
>gi|194696678|gb|ACF82423.1| unknown [Zea mays]
Length = 335
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 137/269 (50%), Positives = 187/269 (69%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R HS +T+FG VGDG+T NT F A+ + +A GGAQL VP G+WLTGSFNLTSH
Sbjct: 40 RPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTGSFNLTSHL 99
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TLY+ + A+++ ++D S+W ++ PLPSYG+G D PG R SLI G NLTDVV+TG N I
Sbjct: 100 TLYLEEGAVIVGAKDSSQWLIVEPLPSYGQGLDLPGPRHQSLISGYNLTDVVITGNNGVI 159
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+GQG WW R + N +RP L+E ++S+++ ISNLT ++SP+W++HPVY SNV + +
Sbjct: 160 DGQGLVWWQWLRSHELNHSRPNLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNVKVHNV 219
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
TI+ +D+P TDGI PDSC+N IED+ I + +++KSGWD YGI G PT + I R
Sbjct: 220 TIKTSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISR 279
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDI 321
+ +S AA+A GSEMSGGI D+ +
Sbjct: 280 VDLLSSSGAALAFGSEMSGGISDIHVNHL 308
>gi|413949760|gb|AFW82409.1| hypothetical protein ZEAMMB73_244455 [Zea mays]
Length = 313
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 127/209 (60%), Positives = 168/209 (80%)
Query: 126 QDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRK 185
+D WPL+ PLPSYGRGRDEPG R+S+ I G+NLTDV++TG N TING+G+ WW K+
Sbjct: 24 KDMKHWPLIAPLPSYGRGRDEPGARYSNFIGGSNLTDVIITGKNGTINGKGQVWWDKFHA 83
Query: 186 KQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
K+ R +L+E+++S+N+ ISN+T +++P WN+HP Y +NV I G+TI AP++SPNTDG
Sbjct: 84 KELKFIRGHLLELLYSENIIISNVTFVNAPYWNLHPTYCTNVTISGVTILAPVNSPNTDG 143
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
I+P S + +IED YIVSGDDCVAVKSGWDEYGI+ MP+QH++I+RL +SP SA IAL
Sbjct: 144 IDPKSSSRVKIEDCYIVSGDDCVAVKSGWDEYGIRFNMPSQHIVIQRLTSVSPTSAMIAL 203
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKT 334
SEMSGGI+DVRA+D AINT+S +R+KT
Sbjct: 204 SSEMSGGIRDVRAKDSVAINTESAIRVKT 232
>gi|4490311|emb|CAB38802.1| putative protein [Arabidopsis thaliana]
gi|7270292|emb|CAB80061.1| putative protein [Arabidopsis thaliana]
Length = 462
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 165/397 (41%), Positives = 233/397 (58%), Gaps = 20/397 (5%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+TDFGGVGDGKTSNT AF A+ +L +AA+GGAQL VP G WL+GSFNLTS+FTL++ +
Sbjct: 74 ITDFGGVGDGKTSNTAAFRRAVRHLEGFAAEGGAQLNVPEGTWLSGSFNLTSNFTLFLER 133
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
AL+L S+D EWP++ PLPSYGRGR+ PGGR SLI G NLT+VV+T +
Sbjct: 134 GALILGSKDLDEWPIIEPLPSYGRGRERPGGRHISLIHGDNLTNVVITVSVLRFSVM--- 190
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSS--NVLIQGLTIRA 236
IK + Q +++ I L++S + + +S ++L+ G +I
Sbjct: 191 --IKEKMGQLMDRGKCGGSYGGTEHWCIREAILLNSRTLIISSSLTSLCSILLSGQSIL- 247
Query: 237 PIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICI 296
DS TN IED YI SGDD VAVKSGWD+YG+ V P+ +++IRR+
Sbjct: 248 ---------FIADSSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVARPSSNIVIRRISGT 298
Query: 297 SPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK 356
+ + + +GSEMSGGI ++ EDI ++ +G+RIKT GRG Y+ I + ++ +K
Sbjct: 299 TRTCSGVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVK 358
Query: 357 YVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNV 416
+ H D +DPKALP V GI ++V+ N ++ L G+ F +C+ NV
Sbjct: 359 VPIRFSSGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNV 418
Query: 417 TIKLTEKPKELQWNCTNIQGITSRVTPQAC-ELLPKK 452
T L PK +W C ++ G S V P +C +LL KK
Sbjct: 419 T--LLGLPKTEKWKCKDVSGYASDVFPLSCPQLLQKK 453
>gi|297597216|ref|NP_001043594.2| Os01g0618900 [Oryza sativa Japonica Group]
gi|54290860|dbj|BAD61521.1| polygalacturonase-like [Oryza sativa Japonica Group]
gi|255673471|dbj|BAF05508.2| Os01g0618900 [Oryza sativa Japonica Group]
Length = 308
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 133/297 (44%), Positives = 186/297 (62%), Gaps = 3/297 (1%)
Query: 153 SLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLI 212
SLI G L DVV+TG N TI+GQG WW ++K TRP+L+E+M S +V +SN+
Sbjct: 2 SLIHGNGLQDVVITGDNGTIDGQGSAWWDMWKKGTLPFTRPHLLELMNSSDVVVSNVVFQ 61
Query: 213 DSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKS 272
DSP WN+HPVY SNV+I+ +T+ AP DSPNTDGI+PDS +N IED YI +GDD +A+KS
Sbjct: 62 DSPFWNIHPVYCSNVVIRNVTVLAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAIKS 121
Query: 273 GWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRI 332
GWDEYG+ G P+ H+ IRR+ SP A A+GSE SGG++ V AE + ++ G+ I
Sbjct: 122 GWDEYGMAYGRPSSHITIRRITGSSP-FAGFAVGSETSGGVEHVLAEHLNFFSSGFGIHI 180
Query: 333 KTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVAD 392
KT GRG +++ + V +T+ +++Y + GD G HPD +D ALP V G+ +++
Sbjct: 181 KTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHPDDRYDRNALPVVDGLTIKNVQGQ 240
Query: 393 NVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL 449
N+ ++ + GI F+ IC+SNV KL W C + G V P C L
Sbjct: 241 NIREAGSIKGIATSAFSRICLSNV--KLNGGAAVRPWKCEAVSGAALDVQPSPCTEL 295
>gi|449532729|ref|XP_004173333.1| PREDICTED: probable polygalacturonase-like, partial [Cucumis
sativus]
Length = 332
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 127/288 (44%), Positives = 184/288 (63%), Gaps = 4/288 (1%)
Query: 163 VVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPV 222
VV +G N TI+GQG+ WW + + N TR +L+E++ S N+ ISNLT +SP W +HPV
Sbjct: 36 VVFSGENGTIDGQGKMWWELWWNRTLNHTRGHLVELINSHNILISNLTFKNSPFWTIHPV 95
Query: 223 YSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVG 282
Y SNV+I+ +TI AP+++PNTDGI+PDS TN IED YI SGDD VAVKSGWD+YGI +
Sbjct: 96 YCSNVVIKDMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGINLA 155
Query: 283 MPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYV 342
P+ +++IRR+ +P + + +GSEMSGGI ++ ED+ ++ +G+RIK+ GRG Y+
Sbjct: 156 RPSSNIVIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIRIKSDQGRGGYI 215
Query: 343 KEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDG 402
+ + M +K + HPD FDPKA+P V GI ++++ N T++ L G
Sbjct: 216 ANVSITNFVMNRVKMAIRFSRGSNDHPDEQFDPKAVPKVKGIFITNLMSLNSTKAPVLYG 275
Query: 403 IRNDPFTGICISNVTI-KLTEKPKELQWNCTNIQGITSRVTPQACELL 449
I + G+C+ NVTI LT K W+C + G ++ V P C L
Sbjct: 276 IAGTSYDGVCMKNVTILGLTPSAK---WHCAFVSGFSTSVFPTPCPQL 320
>gi|356565569|ref|XP_003551012.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 346
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 131/240 (54%), Positives = 155/240 (64%), Gaps = 43/240 (17%)
Query: 17 IKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAF 76
++ + TLL Q ECR E+ A++CRKHSAVLTDFGGVGDGKTSNTKAF
Sbjct: 131 LRYIDTLLDRSESMFQDRECRVANGLDCFEYPAISCRKHSAVLTDFGGVGDGKTSNTKAF 190
Query: 77 NTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPP 136
AISNLS YA+DGGA L+VPPGKWLTGSFNLTSHFTL++ K+A +L SQDESEWP LP
Sbjct: 191 QYAISNLSHYASDGGALLVVPPGKWLTGSFNLTSHFTLFLQKEATILGSQDESEWPTLPV 250
Query: 137 LPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLI 196
LPSYGRGRD P G PY+I
Sbjct: 251 LPSYGRGRDAPDG-------------------------------------------PYMI 267
Query: 197 EVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRI 256
E+MF D++QISNLTLI+S S VHP+YSS+++IQGLTI APIDSPNTDGI+ + + I
Sbjct: 268 EIMFFDHIQISNLTLINSLSLFVHPIYSSDIIIQGLTILAPIDSPNTDGIDLEDSVSVLI 327
>gi|326516252|dbj|BAJ88149.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 297
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 124/281 (44%), Positives = 178/281 (63%), Gaps = 2/281 (0%)
Query: 169 NATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
N TI+GQG WW + + N TR +LIE++ S NV ISN+TL +SP W VHPVY NV+
Sbjct: 6 NGTIDGQGRMWWELWWNRTLNHTRGHLIELVNSTNVLISNVTLRNSPFWTVHPVYCRNVV 65
Query: 229 IQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHL 288
I+ LTI AP+++PNTDGI+PDS + IED YI SGDD VAVKSGWD+YGI VG P+ ++
Sbjct: 66 IKDLTILAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNI 125
Query: 289 IIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVR 348
II+R+ +P + + GSEMSGGI +V D+ N+ S VR+KT VGRG Y+ I +
Sbjct: 126 IIQRVSGTTPTCSGVGFGSEMSGGISNVLVRDLHIWNSASAVRLKTDVGRGGYITNITIA 185
Query: 349 RMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPF 408
+TM+ +K + H D +D ALP ++GI+ D+V +V ++ L+ + +
Sbjct: 186 NVTMEKVKVPIRFSRGSDDHSDDKYDRTALPMISGIHIVDIVGVDVQRAPMLEAVHGAVY 245
Query: 409 TGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL 449
GIC NV+++ ++++W C ++ G V P CE L
Sbjct: 246 EGICFRNVSLRAIR--RQVRWQCESVYGEAHEVFPAPCEEL 284
>gi|219120807|ref|XP_002185635.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582484|gb|ACI65105.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 451
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 143/390 (36%), Positives = 215/390 (55%), Gaps = 29/390 (7%)
Query: 68 GKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNL--------TSHFTLYIHKD 119
G+ +T AF AI + ++GG +LI+P GSFNL TSH L++ K+
Sbjct: 23 GRRDDTAAFEQAIDIIR---SNGGGRLIIPGAP--DGSFNLYRIRPINLTSHLVLFLQKN 77
Query: 120 ALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG---GNATINGQG 176
A++ A DES WPL+PPLPSYG+GRD G R+SSL+ G LT++ + G I+GQG
Sbjct: 78 AVITAIADESVWPLIPPLPSYGQGRDHVGPRYSSLLHGEYLTNITIRGEPDSPGIIDGQG 137
Query: 177 EPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRA 236
WW + R + TR +L+E M+S +++ NL L +SP W H +V +Q + ++A
Sbjct: 138 RYWWDRRRHNRDRYTRGHLVEFMYSSRIRMYNLRLQNSPFWTNHFYDCDDVHVQNVHVKA 197
Query: 237 PIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICI 296
P SPNTDG +PDS N IED+ GDDCVA+KSGWD +GI P++++ IR + C
Sbjct: 198 PWSSPNTDGWDPDSSRNVLIEDSTYRGGDDCVAIKSGWDCFGIDYDTPSENITIRNVTCQ 257
Query: 297 SPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVR--RMTMKT 354
P A IA+G+EMSGG+++V E++T IKT RG YV ++ + R+T
Sbjct: 258 GP-YAGIAIGTEMSGGVRNVTVENVTFTYANKPANIKTGNTRGGYVHDVVYQNIRITGHI 316
Query: 355 MKYVFWMTGDYGSHPDP----GFDPKALPTVTGINYRDMVADN-VTQSAKLD---GIRND 406
+ + Y + P+P + P LP + + + + +T+S ++ G+
Sbjct: 317 DQAIHVDMYHYHNTPNPSCSNNYQPNQLPHLRDLYFFNFEGTQALTESHEVFHFVGLPES 376
Query: 407 PFTGICISNVTIKLTEKPKELQWNCTNIQG 436
P + + N I L WNC+N+QG
Sbjct: 377 PIEYVFLEN--ISFPTPVSSLGWNCSNVQG 404
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/165 (66%), Positives = 129/165 (78%), Gaps = 1/165 (0%)
Query: 313 IKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPG 372
+ DV D+T INTQS +RIKTAVGRG YVK I+ RR TMKTMKYVFWMTG Y HP G
Sbjct: 948 LTDVVITDVTLINTQSAIRIKTAVGRGGYVKNIFARRFTMKTMKYVFWMTGSYKLHPVGG 1007
Query: 373 FDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCT 432
FDPKALP ++ INYRDM A+NVT SAKL+GI+NDPFTG+C+SNVTI L+ PK+LQWNCT
Sbjct: 1008 FDPKALPEISNINYRDMTAENVTISAKLEGIKNDPFTGLCMSNVTIALSPDPKKLQWNCT 1067
Query: 433 NIQGITSRVTPQACELLPKKEPT-DCFFPDDKLPIDDVRLNTCSA 476
++ G+TSRV P+ C LLP K T DC FP DK+PI+ V LN C A
Sbjct: 1068 DVSGVTSRVKPEPCSLLPDKGTTMDCDFPTDKIPIESVVLNKCYA 1112
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/122 (70%), Positives = 100/122 (81%), Gaps = 6/122 (4%)
Query: 45 IEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTG 104
IE+ ALNCRKH AVLTDFG +GDGKTSNTKAF AI+ L+ A DGG QLIVPPG WLTG
Sbjct: 839 IEYLALNCRKHRAVLTDFGAIGDGKTSNTKAFREAITKLTTKAVDGGVQLIVPPGNWLTG 898
Query: 105 SFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVV 164
SFNLTSHFTL+I + A +LASQDESE+P++PPLPSYG RF+SLI+G+NLTDVV
Sbjct: 899 SFNLTSHFTLFIQQGATILASQDESEYPMIPPLPSYGE------ARFTSLIYGSNLTDVV 952
Query: 165 VT 166
+T
Sbjct: 953 IT 954
>gi|414864494|tpg|DAA43051.1| TPA: hypothetical protein ZEAMMB73_419161 [Zea mays]
Length = 220
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 104/179 (58%), Positives = 138/179 (77%)
Query: 47 FQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSF 106
+ CRKH A +T++G VGDG+T NT AF A+++L++ A DGGA L+VPPGKWLTG F
Sbjct: 35 YAGPGCRKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPF 94
Query: 107 NLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVT 166
NLTS FTLY+ + A +LASQD WPL+ PLPSYGRGRDEPG R+S+ I G+NLTDV++T
Sbjct: 95 NLTSCFTLYLDEGAEILASQDMKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIIT 154
Query: 167 GGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSS 225
G N TINGQG+ WW K+ K+ TR +L+E+++SDN+ ISN+T +D+P WN+HP Y +
Sbjct: 155 GKNGTINGQGQVWWDKFHAKELKFTRGHLLELLYSDNIIISNVTFVDAPYWNLHPTYCT 213
>gi|388497356|gb|AFK36744.1| unknown [Lotus japonicus]
Length = 177
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 109/174 (62%), Positives = 134/174 (77%), Gaps = 4/174 (2%)
Query: 309 MSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSH 368
MSGGI+DVRAEDITAI+T+SG+RIKTAVGRG Y K+IYV+RMTM TMK+ FWMTG+YGSH
Sbjct: 1 MSGGIQDVRAEDITAIHTESGIRIKTAVGRGGYGKDIYVQRMTMHTMKWTFWMTGNYGSH 60
Query: 369 PDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQ 428
D +DP ALP + GINYRDMVAD VT + L+GI ND FTGICI+NVTI + K K+
Sbjct: 61 ADKNYDPNALPEIKGINYRDMVADEVTMAGNLEGISNDQFTGICIANVTISMAAKSKKQP 120
Query: 429 WNCTNIQGITSRVTPQACELLPKKEP----TDCFFPDDKLPIDDVRLNTCSASI 478
W C++++GITS VTP+ C LLP + P T C FP + LPID + L C++SI
Sbjct: 121 WTCSDVEGITSGVTPKPCNLLPDQGPEKITTTCEFPTETLPIDMLELKKCTSSI 174
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 104/167 (62%), Positives = 129/167 (77%), Gaps = 3/167 (1%)
Query: 313 IKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPG 372
+ DV ++T INTQS +RIKTA+GRG Y+K+I+ RR TMKTMKYVFWMTG Y HP G
Sbjct: 947 LTDVVITEVTLINTQSAIRIKTAIGRGGYIKDIFARRFTMKTMKYVFWMTGSYKLHPVGG 1006
Query: 373 FDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCT 432
FDPKALP ++ I+YRDM A+NVT SAKL+ I+N PFTG+C+S+VTI L+ PK+LQWNCT
Sbjct: 1007 FDPKALPEISNIHYRDMTAENVTISAKLERIKNGPFTGLCMSSVTIALSPDPKKLQWNCT 1066
Query: 433 NIQGITSRVTPQACELLPKKEPT---DCFFPDDKLPIDDVRLNTCSA 476
++ G+TSRVTP+ C LLP K T DC FP DK+PI+ V LN C A
Sbjct: 1067 DVSGVTSRVTPEPCSLLPDKRTTMDSDCDFPTDKIPIESVVLNKCYA 1113
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 90/152 (59%), Positives = 113/152 (74%), Gaps = 8/152 (5%)
Query: 17 IKILSTLLTLG--LLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTK 74
KIL L G ++ ++ + ++ +IE+ ALNCRKHSAVLT+FG +GDGK SNTK
Sbjct: 808 FKILVVLAISGFPMMESRIQSNLGSTSNKSIEYLALNCRKHSAVLTNFGAIGDGKPSNTK 867
Query: 75 AFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLL 134
AF AIS L+ AADGG QLIVPPG WLTGSFNLTSHFTL+I + A +LASQDESE+P++
Sbjct: 868 AFREAISKLTPLAADGGVQLIVPPGSWLTGSFNLTSHFTLFIQQGATILASQDESEYPMI 927
Query: 135 PPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVT 166
PPLPSYG RF+ L++G+NLTDVV+T
Sbjct: 928 PPLPSYG------DARFTGLVYGSNLTDVVIT 953
>gi|442804408|ref|YP_007372557.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740258|gb|AGC67947.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 430
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 129/316 (40%), Positives = 184/316 (58%), Gaps = 17/316 (5%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+TDFG V DGKT T+AF A+ K GG + VP GK+LTG +L S+ L+I
Sbjct: 9 ITDFGAVPDGKTLCTEAFKKAVK---KCEEAGGGTIYVPAGKFLTGPIHLVSNTNLHIDA 65
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A+LL SQ+ ++PL+ Y R E +S LI+G + +V +TG + T++GQGEP
Sbjct: 66 GAVLLFSQNIEDYPLV-----YSRWEGEEAEVYSPLIYGDKVENVSITG-HGTLDGQGEP 119
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW R+KQ RP I S+ V I + +I+SP+W ++PV +NV+I G+TI+ P
Sbjct: 120 WWRLQREKQLKYPRPRFICFQESERVLIQGIKIINSPAWTINPVRCNNVVIDGITIKNPA 179
Query: 239 DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISP 298
DSPNTDGINPDSC N RI + YI GDDCVA+KSG EY K +P +++ I +
Sbjct: 180 DSPNTDGINPDSCRNVRITNCYISVGDDCVAIKSGV-EYS-KYRIPCENITITNCTMLD- 236
Query: 299 DSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY- 357
+ +GSEMSG ++++ + T G+RIKT GRG V++I V + MK +
Sbjct: 237 GHGGVVIGSEMSGCVRNITISNCVFEGTDRGIRIKTRRGRGGVVEDIRVSNIIMKKVMCP 296
Query: 358 ----VFWMTGDYGSHP 369
+++ G G P
Sbjct: 297 LVMNMYYFCGKGGKEP 312
>gi|413941562|gb|AFW74211.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
Length = 291
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/203 (56%), Positives = 144/203 (70%), Gaps = 1/203 (0%)
Query: 52 CRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQ-LIVPPGKWLTGSFNLTS 110
R+ A + +FG VGDG T NT AF A++ L A GG L VPPG+WLTGSFNLTS
Sbjct: 83 AREVWASVEEFGAVGDGATLNTAAFRRAVAELGARAVGGGGARLDVPPGRWLTGSFNLTS 142
Query: 111 HFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNA 170
FTL++H+ A++L SQD EWPL+ PLPSYGRGR+ G R SLI G L DVV+TG N
Sbjct: 143 RFTLFLHRGAVILGSQDPEEWPLITPLPSYGRGRERLGPRHISLIHGEGLNDVVITGSNG 202
Query: 171 TINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQ 230
TI+GQG WW +R + N TR +LIE++ S NV IS++TL +SP W VHPVY SNV+++
Sbjct: 203 TIDGQGHMWWELWRNRTLNHTRGHLIELVNSTNVLISSVTLSNSPFWTVHPVYCSNVVMK 262
Query: 231 GLTIRAPIDSPNTDGINPDSCTN 253
LTI AP+D+PNTDGI+P C +
Sbjct: 263 DLTILAPLDAPNTDGIDPGLCAS 285
>gi|312794141|ref|YP_004027064.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181281|gb|ADQ41451.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 447
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 135/378 (35%), Positives = 202/378 (53%), Gaps = 23/378 (6%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ +FG G+G +T+AF AI K GG + VP G + G+ +L S+ TLYI
Sbjct: 5 VREFGAKGNGIDKDTEAFKKAIEECEK---QGGGTIFVPAGIYHIGAIHLKSNMTLYIES 61
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A+L SQDE ++PL+ Y R E +S LI+ N +V V G TI+GQGE
Sbjct: 62 GAVLKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAENAENVAVVGF-GTIDGQGEK 115
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW +R K+ RP I +NV I + +I+SPSW V+P+ NV + + I+ P
Sbjct: 116 WWRLHRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVHNVKIQNPY 175
Query: 239 DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISP 298
DSPNTDGINP+SC RI + YI GDDCV +KSG ++ K +P +++ I I ++
Sbjct: 176 DSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCI-MAH 232
Query: 299 DSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-- 356
+ +GSEMSGG+++V + T G+RIKT GRG V++I V + MK +
Sbjct: 233 GHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCP 292
Query: 357 ---YVFWMTGDYGSHPDP-GFDPKALPTVTGINYRDMVADNVTQSAK-----LDGIRNDP 407
Y+++ G G P + + T I R ++D V + A+ L G+ P
Sbjct: 293 FAFYMYYHCGKGGKEKRVWDKSPYPVDSTTPIVRRIYISDVVVREARAAAGFLYGLTEMP 352
Query: 408 FTGICISNVTIKLTEKPK 425
+ SNVT+++ + P+
Sbjct: 353 IEDVVFSNVTVEMAQNPE 370
>gi|414864492|tpg|DAA43049.1| TPA: hypothetical protein ZEAMMB73_419161 [Zea mays]
Length = 205
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 99/169 (58%), Positives = 131/169 (77%)
Query: 47 FQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSF 106
+ CRKH A +T++G VGDG+T NT AF A+++L++ A DGGA L+VPPGKWLTG F
Sbjct: 35 YAGPGCRKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPF 94
Query: 107 NLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVT 166
NLTS FTLY+ + A +LASQD WPL+ PLPSYGRGRDEPG R+S+ I G+NLTDV++T
Sbjct: 95 NLTSCFTLYLDEGAEILASQDMKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIIT 154
Query: 167 GGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSP 215
G N TINGQG+ WW K+ K+ TR +L+E+++SDN+ ISN+T +D+P
Sbjct: 155 GKNGTINGQGQVWWDKFHAKELKFTRGHLLELLYSDNIIISNVTFVDAP 203
>gi|312126393|ref|YP_003991267.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
gi|311776412|gb|ADQ05898.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
Length = 447
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 134/378 (35%), Positives = 201/378 (53%), Gaps = 23/378 (6%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ +FG G+G +T+AF AI K GG + VP G + G+ +L S+ TLYI
Sbjct: 5 VREFGAKGNGIDKDTEAFKKAIEECEK---QGGGTIFVPAGIYHIGAIHLKSNMTLYIES 61
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A+L SQDE ++PL+ Y R E +S LI+ N +V V G TI+GQGE
Sbjct: 62 GAVLKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAENAENVAVVGF-GTIDGQGEK 115
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW +R K+ RP I +NV I + +++SPSW V+P+ NV + + I+ P
Sbjct: 116 WWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKIQNPY 175
Query: 239 DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISP 298
DSPNTDGINP+SC RI + YI GDDCV +KSG ++ K +P +++ I I ++
Sbjct: 176 DSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCI-MAH 232
Query: 299 DSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-- 356
+ +GSEMSGG+++V + T G+RIKT GRG V++I V + MK +
Sbjct: 233 GHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCP 292
Query: 357 ---YVFWMTGDYGSHPDP-GFDPKALPTVTGINYRDMVADNVTQSAK-----LDGIRNDP 407
Y+++ G G P + T I R ++D V + A+ L G+ P
Sbjct: 293 FAFYMYYHCGKGGKEKRVWDKSPYPVDESTPIVRRIYISDVVVREARAAAGFLYGLTEMP 352
Query: 408 FTGICISNVTIKLTEKPK 425
+ SNVT+++ + P+
Sbjct: 353 IEDVVFSNVTVEMAQNPE 370
>gi|312621274|ref|YP_004022887.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
gi|312201741|gb|ADQ45068.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
Length = 447
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 136/379 (35%), Positives = 203/379 (53%), Gaps = 25/379 (6%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG G+G +T+AF AI K +GG + VP G + G+ +L S+ TLYI
Sbjct: 5 VCDFGAKGNGVDKDTEAFKKAIEVCEK---NGGGTVYVPAGIYHVGALHLKSNMTLYIES 61
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A+L SQDE ++PL+ Y R E +S LI+ + +V V G TI+GQGE
Sbjct: 62 GAVLKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAEDAENVAVVGF-GTIDGQGEK 115
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW +R K+ RP I +NV I + +I+SPSW V+P+ NV + + I+ P
Sbjct: 116 WWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIINSPSWTVNPIECQNVTVHNIKIQNPY 175
Query: 239 DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISP 298
DSPNTDGINP+SC RI + YI GDDCV +KSG ++ K +P +++ I I ++
Sbjct: 176 DSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKERIPCENITITNCI-MAH 232
Query: 299 DSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-- 356
+ +GSEMSGG+++V + T G+RIKT GRG V++I V + MK +
Sbjct: 233 GHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCP 292
Query: 357 ---YVFWMTGDYGSHPDPGFDPKALPT--VTGINYRDMVADNVTQSAK-----LDGIRND 406
Y+++ G G +D P T I R ++D V + A+ L G+
Sbjct: 293 FAFYMYYHCGK-GGKEKRVWDKSPYPVDESTPIVRRIYISDVVVREARAAAGFLYGLTEM 351
Query: 407 PFTGICISNVTIKLTEKPK 425
P + SNVT+++ + P+
Sbjct: 352 PIEDVVFSNVTVEMAQNPE 370
>gi|146295422|ref|YP_001179193.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145408998|gb|ABP66002.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 447
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 134/378 (35%), Positives = 201/378 (53%), Gaps = 23/378 (6%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG VG+G+ +T+AF AI GG + VP G +LTG +L S+ TLYI
Sbjct: 5 VRDFGAVGNGQVKDTEAFKKAIE---ASWEQGGGTVYVPAGVYLTGPIHLKSNITLYIES 61
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A L S D ++PL+ Y R E +S LI+ N ++ V G TI+GQGE
Sbjct: 62 GATLKFSNDLDDFPLV-----YTRWEGEEQEAYSPLIYAENAENIAVVGF-GTIDGQGEM 115
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW +R K+ RP + NV I + +++SPSW V+P+ NV + + I+ P
Sbjct: 116 WWKLHRNKELKYPRPRTVCFYRCKNVTIEGIKIVNSPSWTVNPIECENVTVHNVKIQNPY 175
Query: 239 DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISP 298
DSPNTDGINP+SC RI + YI GDDCV +KSG ++ KV +P +++ I I ++
Sbjct: 176 DSPNTDGINPESCEGVRISNCYIDVGDDCVTLKSGTED--CKVRIPCENIAITNCI-MAH 232
Query: 299 DSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTM--- 355
I +GSEMSGG+++V + T G+RIKT GRG V++I V + MK +
Sbjct: 233 GHGGIVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGIVEDIRVSNIVMKNVICP 292
Query: 356 --KYVFWMTGDYGSHPDP-GFDPKALPTVTGINYRDMVADNVTQSAK-----LDGIRNDP 407
Y+++ G G P + + T I R ++D + + A+ L G+ P
Sbjct: 293 FAFYMYYHCGKGGKEKRVWDKSPYPVDSTTPIVRRIYISDVIVRQARAAAGFLYGLTEMP 352
Query: 408 FTGICISNVTIKLTEKPK 425
+ SNVT+++ + P+
Sbjct: 353 IEDVVFSNVTVEMAQNPE 370
>gi|344995379|ref|YP_004797722.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963598|gb|AEM72745.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 447
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 136/378 (35%), Positives = 200/378 (52%), Gaps = 25/378 (6%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ +FG G+G T+AF AI K GG + VP G + G+ +L S+ TLYI
Sbjct: 5 VREFGAKGNGIDKVTEAFKKAIEECEK---QGGGTIFVPAGIYHIGAIHLKSNMTLYIES 61
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A+L SQDE ++PL+ Y R E +S LI+ N +V V G TI+GQGE
Sbjct: 62 GAVLKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAENAENVAVVGF-GTIDGQGEK 115
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW +R K+ RP I +NV I + +I+SPSW V+P+ NV + + I+ P
Sbjct: 116 WWRLHRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVHNVKIQNPY 175
Query: 239 DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISP 298
DSPNTDGINP+SC RI + YI GDDCV +KSG ++ K +P +++ I I ++
Sbjct: 176 DSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCI-MAH 232
Query: 299 DSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-- 356
+ +GSEMSGG+++V + T G+RIKT GRG V++I V + MK +
Sbjct: 233 GHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCP 292
Query: 357 ---YVFWMTGDYGSHPDPGFDPKALPT--VTGINYRDMVADNVTQSAK-----LDGIRND 406
Y+++ G G +D P T I R ++D V + A+ L G+
Sbjct: 293 FAFYMYYHCGK-GGKEKRVWDKSPYPVDDTTPIVRRIYISDVVVREARAAAGFLYGLTEM 351
Query: 407 PFTGICISNVTIKLTEKP 424
P + SNVT+++ + P
Sbjct: 352 PIEDVVFSNVTVEMAQNP 369
>gi|302872741|ref|YP_003841377.1| polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
gi|302575600|gb|ADL43391.1| Polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
Length = 447
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 133/378 (35%), Positives = 202/378 (53%), Gaps = 23/378 (6%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ +FG G+G +T+AF AI K+ GG + VP G + TG +L S+ TLYI
Sbjct: 5 VVEFGAKGNGIDKDTEAFKRAIEACEKH---GGGTIFVPAGIYHTGPIHLKSNMTLYIEN 61
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A+L SQD ++PL+ Y R E +S LI+ N +V V G TI+GQGE
Sbjct: 62 GAVLKFSQDIEDYPLV-----YTRWEGEEMQVYSPLIYAENAENVAVVGF-GTIDGQGEK 115
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW +R K+ RP I +NV I + +++SPSW V+P+ NV + + I+ P
Sbjct: 116 WWRLHRDKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKIQNPY 175
Query: 239 DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISP 298
DSPNTDGINP+SC RI + YI GDDCV +KSG ++ K +P +++ I I ++
Sbjct: 176 DSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKERIPCENITITNCI-MAH 232
Query: 299 DSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-- 356
+ +GSEMSGG+++V + T G+RIKT GRG V++I V + MK +
Sbjct: 233 GHGGVVIGSEMSGGVRNVVISNCVFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCP 292
Query: 357 ---YVFWMTGDYGSHPDP-GFDPKALPTVTGINYRDMVADNVTQSAK-----LDGIRNDP 407
Y+++ G G P + + T + R ++D V + A+ L G+ P
Sbjct: 293 FAFYMYYHCGKGGKEKKVWDKSPYPVDSTTPVVRRIYISDVVVREARAAAGFLYGLTEMP 352
Query: 408 FTGICISNVTIKLTEKPK 425
+ SNVT+++ + P+
Sbjct: 353 IEDVVFSNVTVEMAQNPE 370
>gi|312136085|ref|YP_004003423.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
gi|311776136|gb|ADQ05623.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
Length = 447
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 133/378 (35%), Positives = 201/378 (53%), Gaps = 23/378 (6%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ +FG G+G +T+AF AI K GG + VP G + TG +L S+ TLYI
Sbjct: 5 VREFGAKGNGIDKDTEAFKKAIEECEK---QGGGTIFVPAGIYHTGPIHLKSNMTLYIEN 61
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A+L SQD ++PL+ Y R E +S LI+ N +V V G TI+GQGE
Sbjct: 62 GAVLKFSQDIEDYPLV-----YTRWEGEEMQVYSPLIYAENAENVAVVGF-GTIDGQGEK 115
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW +R K+ RP I +NV I + +++SPSW V+P+ NV + + I+ P
Sbjct: 116 WWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKIQNPY 175
Query: 239 DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISP 298
DSPNTDGINP+SC RI + YI GDDCV +KSG ++ K +P +++ I I ++
Sbjct: 176 DSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCI-MAH 232
Query: 299 DSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-- 356
+ +GSEMSGG+++V + T G+RIKT GRG V++I V + MK +
Sbjct: 233 GHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCP 292
Query: 357 ---YVFWMTGDYGSHPDP-GFDPKALPTVTGINYRDMVADNVTQSAK-----LDGIRNDP 407
Y+++ G G P + + T + R ++D V + A+ L G+ P
Sbjct: 293 FAFYMYYHCGKGGKEKKVWDKSPYPVDSTTPVVRRIYISDVVVREARAAAGFLYGLTEMP 352
Query: 408 FTGICISNVTIKLTEKPK 425
+ SNVT+++ + P+
Sbjct: 353 IEDVVFSNVTVEMAQNPE 370
>gi|222530340|ref|YP_002574222.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
gi|222457187|gb|ACM61449.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
Length = 447
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 134/379 (35%), Positives = 203/379 (53%), Gaps = 25/379 (6%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ +FG G+G +T+AF AI K +GG + VP G + G+ +L S+ TLYI
Sbjct: 5 VCNFGAKGNGVDKDTEAFKKAIEVCEK---NGGGTVYVPAGIYHIGALHLKSNMTLYIES 61
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A+L SQDE ++PL+ Y R E +S LI+ + +V V G TI+GQGE
Sbjct: 62 GAVLKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAEDAENVAVVGF-GTIDGQGEK 115
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW +R K+ RP I +NV I + +I+SPSW V+P+ NV + + I+ P
Sbjct: 116 WWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIINSPSWTVNPIECQNVTVHNIKIQNPY 175
Query: 239 DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISP 298
DSPNTDGINP+SC RI + YI GDDCV +KSG ++ K +P +++ I I ++
Sbjct: 176 DSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKERIPCENITITNCI-MAH 232
Query: 299 DSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-- 356
+ +GSEMSGG+++V + T G+RIKT GRG V++I V + MK +
Sbjct: 233 GHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCP 292
Query: 357 ---YVFWMTGDYGSHPDPGFDPKALPT--VTGINYRDMVADNVTQSAK-----LDGIRND 406
Y+++ G G +D P T + R ++D V + A+ L G+
Sbjct: 293 FAFYMYYHCGK-GGKEKRVWDKSPYPVDDTTPVVRRIYISDVVVRQARAAAGFLYGLTEM 351
Query: 407 PFTGICISNVTIKLTEKPK 425
P + SNVT+++ + P+
Sbjct: 352 PIEDVVFSNVTVEMAQNPE 370
>gi|344995681|ref|YP_004798024.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963900|gb|AEM73047.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 443
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 135/379 (35%), Positives = 198/379 (52%), Gaps = 29/379 (7%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ +FG G+G +T+AF AI K GG + VP G + G+ +L S+ TLYI
Sbjct: 5 VREFGAKGNGIDKDTEAFKKAIEECEK---QGGGTIFVPAGIYHIGAIHLKSNMTLYIES 61
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A+L SQDE E Y R E +S LI+ N +V V G TI+GQGE
Sbjct: 62 GAVLKFSQDEEE---------YTRWEGEEMQVYSPLIYAENAENVAVVGF-GTIDGQGEK 111
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW +R K+ RP I +NV I + +I+SPSW V+P+ NV + + I+ P
Sbjct: 112 WWRLHRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVHNVKIQNPY 171
Query: 239 DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISP 298
DSPNTDGINP+SC RI + YI GDDCV +KSG ++ K +P +++ I I ++
Sbjct: 172 DSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCI-MAH 228
Query: 299 DSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-- 356
+ +GSEMSGG+++V + T G+RIKT GRG V++I V + MK +
Sbjct: 229 GHGGVVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCP 288
Query: 357 ---YVFWMTGDYGSHPDPGFDPKALPT--VTGINYRDMVADNVTQSAK-----LDGIRND 406
Y+++ G G +D P T I R ++D V + A+ L G+
Sbjct: 289 FAFYMYYHCGK-GGKEKRVWDKSPYPVDDTTPIVRRIYISDVVVREARAAAGFLYGLTEM 347
Query: 407 PFTGICISNVTIKLTEKPK 425
P + SNVT+++ + P+
Sbjct: 348 PIEDVVFSNVTVEMAQNPE 366
>gi|54290861|dbj|BAD61522.1| polygalacturonase-like [Oryza sativa Japonica Group]
Length = 261
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 104/237 (43%), Positives = 147/237 (62%), Gaps = 3/237 (1%)
Query: 213 DSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKS 272
DSP WN+HPVY SNV+I+ +T+ AP DSPNTDGI+PDS +N IED YI +GDD +A+KS
Sbjct: 15 DSPFWNIHPVYCSNVVIRNVTVLAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAIKS 74
Query: 273 GWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRI 332
GWDEYG+ G P+ H+ IRR+ SP A A+GSE SGG++ V AE + ++ G+ I
Sbjct: 75 GWDEYGMAYGRPSSHITIRRITGSSP-FAGFAVGSETSGGVEHVLAEHLNFFSSGFGIHI 133
Query: 333 KTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVAD 392
KT GRG +++ + V +T+ +++Y + GD G HPD +D ALP V G+ +++
Sbjct: 134 KTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHPDDRYDRNALPVVDGLTIKNVQGQ 193
Query: 393 NVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL 449
N+ ++ + GI F+ IC+SNV KL W C + G V P C L
Sbjct: 194 NIREAGSIKGIATSAFSRICLSNV--KLNGGAAVRPWKCEAVSGAALDVQPSPCTEL 248
>gi|307135908|gb|ADN33771.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Cucumis melo subsp. melo]
Length = 188
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/156 (64%), Positives = 123/156 (78%)
Query: 20 LSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTA 79
+S ++ L L+S E + + ++ A+NCR+H+AVLTDFGGVGDG TSNT+AF A
Sbjct: 17 ISAVILLALVSLATVEGKRQCPTNYLQVPAINCRQHTAVLTDFGGVGDGVTSNTQAFRRA 76
Query: 80 ISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPS 139
I +LS AA+GGAQLIVPPGKWLTGSFNLTSHFTL++HKDA +LASQDESEWP + LPS
Sbjct: 77 IEHLSPLAANGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDATILASQDESEWPQVAILPS 136
Query: 140 YGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQ 175
YG GRD PGGR+SSLI+GTNLTDVV+TG N + Q
Sbjct: 137 YGVGRDAPGGRYSSLIYGTNLTDVVITGNNGCKSSQ 172
>gi|323453807|gb|EGB09678.1| hypothetical protein AURANDRAFT_2438, partial [Aureococcus
anophagefferens]
Length = 295
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 118/301 (39%), Positives = 181/301 (60%), Gaps = 10/301 (3%)
Query: 49 ALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPG-KWLTGSFN 107
A+ K + + +G DG T +T AF A+++ +A ++VPPG + L N
Sbjct: 1 AVTTAKETISVASYGARCDGATEDTAAFEAALAHAGAHAH---TTILVPPGARCLIAPIN 57
Query: 108 LTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG 167
LTSH TL I +A + D + WPL+P PSYG+GRD PG R++SL+ G ++ DV + G
Sbjct: 58 LTSHTTLRIAANATVAGVADAARWPLIPGAPSYGQGRDHPGPRYTSLVHGEHVEDVTIQG 117
Query: 168 GNAT--INGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSS 225
T ++G G+ WW + VTR +LIE M+S +++I +L++ DSP WN H S
Sbjct: 118 EGPTSVLDGNGQYWWDQVH--SMTVTRGHLIEFMYSKDIRIYDLSMRDSPFWNNHFYDSE 175
Query: 226 NVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPT 285
V ++ + I A +SPNTDG +PDS + +E + V GDDCVA+KSGWD +G+ G P+
Sbjct: 176 RVHVRNVHISAKDNSPNTDGWDPDSARDVLVEHSTYVGGDDCVAIKSGWDCFGVAYGKPS 235
Query: 286 QHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGV-RIKTAVGRGAYVKE 344
+++ IR + C + A IA+GSEMSGG++DV + + + +G+ +KT RG YV+
Sbjct: 236 RNITIRDVNC-TGSKAGIAIGSEMSGGVEDVLVQRVNILGKANGIAHVKTGPTRGGYVRN 294
Query: 345 I 345
+
Sbjct: 295 V 295
>gi|297600007|ref|NP_001048308.2| Os02g0781000 [Oryza sativa Japonica Group]
gi|255671294|dbj|BAF10222.2| Os02g0781000, partial [Oryza sativa Japonica Group]
Length = 285
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 105/261 (40%), Positives = 167/261 (63%), Gaps = 3/261 (1%)
Query: 191 TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDS-PNTDGINPD 249
TRP L+++M+S ++ ++N+TL +SP W+ HP +N+ + +TI API S PNTDGI+PD
Sbjct: 1 TRPPLLQLMWSKDIIVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDPD 60
Query: 250 SCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEM 309
SC + IE+ YI GDD +AVKSGWD+YGI G P+++++IR ++ S SA I++GSEM
Sbjct: 61 SCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEM 120
Query: 310 SGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHP 369
SGGI +V ED+ ++ G+RIKTA+GRG Y+++I R +T ++ + DY H
Sbjct: 121 SGGIANVTVEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEHA 180
Query: 370 DPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQW 429
D G+D A P +T I+++++ V + G + P I +++I ++ K K + +
Sbjct: 181 DDGYDRDAFPDITNISFKEIHGRGVRVPVRAHGSSDIPIKDISFQDMSIGISYKKKHI-F 239
Query: 430 NCTNIQG-ITSRVTPQACELL 449
C+ I+G + V P+ CE L
Sbjct: 240 QCSFIEGRVIGSVFPKPCENL 260
>gi|297827255|ref|XP_002881510.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297327349|gb|EFH57769.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 153
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/146 (65%), Positives = 116/146 (79%), Gaps = 3/146 (2%)
Query: 332 IKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVA 391
IKTA+GRG YVK++YVR MTM TMKYVFWMTG YGSHPD +DPKALP + INY+DMVA
Sbjct: 1 IKTAIGRGGYVKDVYVRGMTMNTMKYVFWMTGSYGSHPDEHYDPKALPVIQNINYQDMVA 60
Query: 392 DNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPK 451
+NVT A+L GI D FTGICISNVTI L++KPK++ WNCT++ G TS VTPQ C+LLP+
Sbjct: 61 ENVTMPAQLAGISGDQFTGICISNVTITLSKKPKKVLWNCTDVSGYTSGVTPQPCQLLPE 120
Query: 452 KEP---TDCFFPDDKLPIDDVRLNTC 474
K+P C FP+D +PID+V+L C
Sbjct: 121 KQPGTIVPCNFPEDPIPIDEVKLQRC 146
>gi|238005826|gb|ACR33948.1| unknown [Zea mays]
Length = 256
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 104/190 (54%), Positives = 136/190 (71%), Gaps = 1/190 (0%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLI-VPPGKWLTGSFNLTSHFTLYIH 117
+ FG GDG+T NT AF A++ +++ G L+ VPPG WLTG FNLTSH TL++
Sbjct: 46 VASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVPPGVWLTGPFNLTSHMTLFLA 105
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
+ A++ A+QD S WPL+ PLPSYGRGR+ PGGR+ SLI G L DV +TG N TI+GQG
Sbjct: 106 RGAIVRATQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGHGLQDVFITGENGTIDGQGG 165
Query: 178 PWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAP 237
WW ++K+ TRP+L+E+M+S +V +SNL DSP WN+HPVY SNV+I LT+ AP
Sbjct: 166 VWWDMWKKRTLPFTRPHLLELMYSTDVVVSNLVFQDSPFWNIHPVYCSNVVIANLTVLAP 225
Query: 238 IDSPNTDGIN 247
DSPNTDGI+
Sbjct: 226 HDSPNTDGID 235
>gi|126009432|gb|ABM30197.2| polygalacturonase [Brassica juncea]
Length = 278
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 116/207 (56%), Positives = 143/207 (69%), Gaps = 3/207 (1%)
Query: 46 EFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGS 105
EF L R S LTDFG VGDG T NT+AF A+ +SK + GG QL VPPG+WLT
Sbjct: 74 EFPRL--RPVSFNLTDFGAVGDGVTVNTEAFERAVYAISKLSKKGGGQLNVPPGRWLTAP 131
Query: 106 FNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVV 165
FNLTS TL++ +DA +LA QDE+ WPLLPPLPSYG GR+ G R+ S I G NL DVVV
Sbjct: 132 FNLTSFMTLFLAEDAEILAVQDETLWPLLPPLPSYGYGREHYGPRYGSFIHGQNLKDVVV 191
Query: 166 TGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSS 225
TG N ++NGQG WW KYR K N TR L+++M+S + +N+TL DSP W +HP
Sbjct: 192 TGNNGSVNGQGVYWWKKYRSKLLNHTRGPLVQIMWSSDAVFANITLRDSPFWTLHPYDCK 251
Query: 226 NVLIQGLTIRAPI-DSPNTDGINPDSC 251
NV I +TI AP+ ++PNTDGI+PDSC
Sbjct: 252 NVTITNMTILAPVFEAPNTDGIDPDSC 278
>gi|129771144|gb|ABO31369.1| polygalacturonase [Gossypium hirsutum]
Length = 219
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/200 (52%), Positives = 137/200 (68%), Gaps = 1/200 (0%)
Query: 157 GTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPS 216
G L DVV+ G N TI+GQG WW +R+ TRP L+E M S + ISN+ +SP
Sbjct: 8 GDGLPDVVIRGENGTIDGQGGIWWNMWRQGNLPFTRPNLVEFMNSRGIIISNVIFKNSPF 67
Query: 217 WNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDE 276
WN+ PVY SNV+I+ +TI AP DSPNTDGI+PDS +N IED++I +GDD VAVKSGWDE
Sbjct: 68 WNIPPVYCSNVVIRYVTILAPTDSPNTDGIDPDSSSNVCIEDSFISTGDDLVAVKSGWDE 127
Query: 277 YGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAV 336
YGI G P+ H+ IRR+ SP A IA+GSE SGG++ V AE+I N+ GV IKT +
Sbjct: 128 YGIGYGRPSSHITIRRVTGSSP-FAGIAVGSETSGGVEHVLAENIVIYNSGIGVNIKTNI 186
Query: 337 GRGAYVKEIYVRRMTMKTMK 356
GRG ++K I V + M+ ++
Sbjct: 187 GRGGFIKNITVSPVFMENVR 206
>gi|357452825|ref|XP_003596689.1| Exo-poly-alpha-D-galacturonosidase [Medicago truncatula]
gi|355485737|gb|AES66940.1| Exo-poly-alpha-D-galacturonosidase [Medicago truncatula]
Length = 238
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 105/210 (50%), Positives = 132/210 (62%), Gaps = 15/210 (7%)
Query: 52 CRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSH 111
R HS +T+FG VGD T NTKAF AI L YA GGA+L VP G+W TGSF+L SH
Sbjct: 37 VRPHSVSITEFGAVGDWITLNTKAFQNAIFYLKLYADKGGAKLFVPAGRWFTGSFDLISH 96
Query: 112 FTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNAT 171
TL + KDA++L S + +WP++ P PSYGRGR+ PGG SLI+G NLTDV++TG N T
Sbjct: 97 LTLLLDKDAVILGSTNPGDWPVVDPPPSYGRGRELPGGWHRSLIYGCNLTDVIITGNNGT 156
Query: 172 INGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQG 231
I+GQ WW IE M S NV ISN+T ++SP W +H VY S+V +Q
Sbjct: 157 IDGQRSIWW---------------IESMNSKNVLISNVTFLNSPFWTMHHVYCSHVTVQN 201
Query: 232 LTIRAPIDSPNTDGINPDSCTNTRIEDNYI 261
+TI AP PNTDGI+ S ++ YI
Sbjct: 202 VTILAPFGLPNTDGIDSYSLIMYALKTGYI 231
>gi|47497401|dbj|BAD19438.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 277
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/253 (39%), Positives = 160/253 (63%), Gaps = 3/253 (1%)
Query: 199 MFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDS-PNTDGINPDSCTNTRIE 257
M+S ++ ++N+TL +SP W+ HP +N+ + +TI API S PNTDGI+PDSC + IE
Sbjct: 1 MWSKDIIVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDPDSCQDVLIE 60
Query: 258 DNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVR 317
+ YI GDD +AVKSGWD+YGI G P+++++IR ++ S SA I++GSEMSGGI +V
Sbjct: 61 NCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEMSGGIANVT 120
Query: 318 AEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKA 377
ED+ ++ G+RIKTA+GRG Y+++I R +T ++ + DY H D G+D A
Sbjct: 121 VEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEHADDGYDRDA 180
Query: 378 LPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQG- 436
P +T I+++++ V + G + P I +++I ++ K K + + C+ I+G
Sbjct: 181 FPDITNISFKEIHGRGVRVPVRAHGSSDIPIKDISFQDMSIGISYKKKHI-FQCSFIEGR 239
Query: 437 ITSRVTPQACELL 449
+ V P+ CE L
Sbjct: 240 VIGSVFPKPCENL 252
>gi|255641037|gb|ACU20798.1| unknown [Glycine max]
Length = 186
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 95/186 (51%), Positives = 128/186 (68%)
Query: 134 LPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRP 193
+ PLPSYGRG D P GR+ SLI+G NL+DVV+TG N I+GQG WW N +RP
Sbjct: 1 MDPLPSYGRGIDVPVGRYRSLIYGQNLSDVVITGDNGIIDGQGSVWWDLISTHSLNYSRP 60
Query: 194 YLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTN 253
++IE++ SDN+ ISNLT ++SP+W++HPVY SN+ IQ +T++AP P T GI PDS +
Sbjct: 61 HIIELVGSDNIIISNLTFLNSPAWSIHPVYCSNIQIQKITVQAPTKFPYTSGIVPDSSEH 120
Query: 254 TRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGI 313
I++ I +G D + +KSGWDEYG+ G PT ++ IR + S A +A GSEMSGGI
Sbjct: 121 VCIDNCNISTGHDAIVLKSGWDEYGVAYGKPTSNVHIRGVYLQSSSGAGLAFGSEMSGGI 180
Query: 314 KDVRAE 319
D+ AE
Sbjct: 181 SDIIAE 186
>gi|116620373|ref|YP_822529.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223535|gb|ABJ82244.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 446
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 124/380 (32%), Positives = 196/380 (51%), Gaps = 34/380 (8%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
FG GDGK +T A + A GG ++V PG++LTG+ L S+ TL + A
Sbjct: 27 FGAAGDGKKKDTAA---IARAIDAAAKAGGGTVVVSPGRYLTGALTLKSNVTLDVEAGAT 83
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWI 181
LL S D ++PL + +G ++ +SSLI+ + + G TI+GQG+ WW
Sbjct: 84 LLGSPDPEDYPLRENV--WGEKKE-----YSSLIYADGAVHITIRG-RGTIDGQGQAWWK 135
Query: 182 KY----RKK---------------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPV 222
+ R+K + RP++I+++ S +V I L LI+S SW V+P+
Sbjct: 136 RMGWPDRRKIAPEQRTAAERAELAKLEYGRPHMIKLVRSKHVVIEGLHLINSASWTVNPL 195
Query: 223 YSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVG 282
V I G+TI P+ SPNTDGINP+SC N +I ++ I GDDCV +KSG DE G +VG
Sbjct: 196 LCEFVRIDGITIENPVPSPNTDGINPESCRNVQILNSRIDVGDDCVTLKSGKDEAGRRVG 255
Query: 283 MPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYV 342
P +++ I + + A+ +GSEMSGG+++V + T G+R+K+ GRG V
Sbjct: 256 RPDENITITNCVMLK-GHGAVTIGSEMSGGVRNVVVSNCVFQGTDVGIRVKSQRGRGGIV 314
Query: 343 KEIYVRRMTMKTMKYVFWMTGDYGSHPDPG-FDP--KALPTVTGINYRDMVADNVTQSAK 399
+ V + M+ + F +T Y PG P + P + + ++ A + +
Sbjct: 315 EGFVVSNVVMQDVASAFTLTSFYAGTDKPGDLFPVGEGTPRLRDFRFSNITARGSKTAGQ 374
Query: 400 LDGIRNDPFTGICISNVTIK 419
+ G++ P I + V I+
Sbjct: 375 ITGLKEMPIENITFTGVRIQ 394
>gi|317474355|ref|ZP_07933629.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
gi|316909036|gb|EFV30716.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
Length = 477
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 122/378 (32%), Positives = 197/378 (52%), Gaps = 48/378 (12%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ D+G +G+ T T+AF AI S GG ++IVP G +++G L S+ +
Sbjct: 12 VNDYGAIGN-HTLCTEAFQKAIDTASDR---GGGKVIVPAGDYVSGPLFLRSNIEFEVCS 67
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A + S D + P++ G ++SL G +L +V +TG I+GQG+
Sbjct: 68 GATIYFSNDIANTPIIN-----GSWEGIERKVYASLFTGHDLKNVTITG-RGRIDGQGKA 121
Query: 179 WW--------------IKYRKKQ------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWN 218
WW I+ R+ + RP +I + +NV+I++LT+ +SPSW
Sbjct: 122 WWDAFWETDKMRTAAGIREREPENPEGSPLKYPRPRMINLYRCENVKIADLTITNSPSWT 181
Query: 219 VHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYG 278
VHPVY NV+I G++I P +SPNTDGI+PD C RI + YI GDDC+ +KSG++E+G
Sbjct: 182 VHPVYCRNVIIDGISIIQPYESPNTDGIDPDCCNGVRISNCYIDCGDDCITLKSGYNEHG 241
Query: 279 IKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGR 338
K G+P ++++I + +A+ +GSEMSGGIK+V + T G+R+KT GR
Sbjct: 242 RKKGIPCENIVISNCT-FAHGRSAVGIGSEMSGGIKNVTVMNCVFKGTLRGLRVKTGRGR 300
Query: 339 GAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFD---------PKALPTVTGINYRDM 389
G V+ I+ + M+ ++ G D G++ ++ P I ++D+
Sbjct: 301 GGTVENIFASGIIMENLR--------EGISIDMGYEGVSGKIYPVTESTPFFKNIRFKDI 352
Query: 390 VADNVTQSAKLDGIRNDP 407
+ NV Q+ + G+ P
Sbjct: 353 IGTNVEQAINIIGLAEAP 370
>gi|379727941|ref|YP_005320126.1| polygalacturonase [Melissococcus plutonius DAT561]
gi|376318844|dbj|BAL62631.1| polygalacturonase [Melissococcus plutonius DAT561]
Length = 442
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 128/375 (34%), Positives = 192/375 (51%), Gaps = 24/375 (6%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L DF + DG + +TKAF AI + GG ++VPPG +LTG L S+ I
Sbjct: 8 LQDFSPIADGISLDTKAFEAAIKVAER---QGGGHIVVPPGTYLTGPIRLISNLVFEIQA 64
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A LL + D ++P + R + I+G NLT+V++TG + T++GQG
Sbjct: 65 GATLLFTDDVEQFPTVD-----SRWEGVKSKAYMPCIYGKNLTNVILTG-SGTLDGQGTN 118
Query: 179 WWIKYRK--KQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRA 236
WW +R+ ++ RPYLI +S + IS+L L SPSW VHP+ +V IQ ++I
Sbjct: 119 WWKLHRETPEKLAYPRPYLIGFDYSSRITISDLNLTMSPSWTVHPMECYDVTIQNISILN 178
Query: 237 PIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICI 296
P DSPNTDGI+P+SC N RI + I GDDC+A+KSG E +++ I +
Sbjct: 179 PADSPNTDGIDPESCKNLRILNCNIDVGDDCIAIKSG-TEQTTTSKSACENITISNCTMV 237
Query: 297 SPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK 356
A+ LGSEMSG I++V + T G+R+KT GRG V+ I V + M+ +
Sbjct: 238 H-GHGAVVLGSEMSGNIRNVTISNCVFQQTDRGIRMKTRRGRGGVVENITVSTIVMEDVL 296
Query: 357 YVFWMTGDYGSHP----------DPGFDPKALPTVTGINYRDMVADNVTQSAK-LDGIRN 405
F + Y P +P K P I++ ++VA V +A + G+
Sbjct: 297 CPFVINAYYFCGPKGKEKYVWDKNPYPITKETPCFRSIHFSNIVAKKVRAAAGFIYGLPE 356
Query: 406 DPFTGICISNVTIKL 420
P + +N+ I++
Sbjct: 357 MPVQDVSFTNIQIEM 371
>gi|403744854|ref|ZP_10953930.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121782|gb|EJY56052.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
Length = 865
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/391 (32%), Positives = 192/391 (49%), Gaps = 46/391 (11%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
FG +GDGK+ +T+A AI + K G L VP G + T L S TLY+ K A
Sbjct: 137 FGAIGDGKSDDTRALQRAIDAVPK-----GGTLYVPAGTYYTAPLQLKSDMTLYLAKGAT 191
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP--- 178
LL S + + P + R R+ SLI G N+ +V +TG I+G GE
Sbjct: 192 LLGSSNIDAYK-----PIWSRWEGTEMYRYMSLITGDNVRNVTITG-EGVIDGNGETPIH 245
Query: 179 ---------WWIKYRKKQFN-----------------VTRPYLIEVMFSDNVQISNLTLI 212
WW K K+ + RP LIE + S N+ I +T+
Sbjct: 246 DNAGNTYGNWWSKQYKEPLSDPAVSLVQSPNYSQGLPYARPSLIEFLHSQNILIQGVTVQ 305
Query: 213 DSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKS 272
+SPSW +HPVY +V + + I P S NTDG++PDS +I D+ GDD +A+KS
Sbjct: 306 NSPSWTIHPVYCDHVTLADVHIVNPPTSDNTDGVDPDSVNGMQIIDDTFSVGDDDIAIKS 365
Query: 273 GWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRI 332
G D G ++G+P+Q++++R C + +++GSEMSGG+++V E+ T +G+RI
Sbjct: 366 GKDAEGRRIGIPSQNIVVRN--CHMLNGHGVSIGSEMSGGVQNVLVENCDFDGTNAGLRI 423
Query: 333 KTAVGRGAYVKEIYVRRMTMKTMK-YVFWMTGDY---GSHPDPGFDPKALPTVTGINYRD 388
KT GRG V+ I ++M ++ F + +Y GS PG A P + +N+ +
Sbjct: 424 KTLRGRGGIVQNITFDHVSMSNIQAQAFIIDENYASNGSALPPGPVTDATPAIRNLNFDN 483
Query: 389 MVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
+ + Q+ G+ P I NV I
Sbjct: 484 ITVNGAKQAMYFSGLAELPIQNIAFHNVAIN 514
>gi|338730196|ref|YP_004659588.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
gi|335364547|gb|AEH50492.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
Length = 515
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 125/384 (32%), Positives = 202/384 (52%), Gaps = 26/384 (6%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG GDGKT +T A AI + + G ++ PPG +L L S+ T+ I K
Sbjct: 84 VRDFGAKGDGKTLDTFAVQAAIMSCPE-----GGTVVFPPGTYLLTPVFLKSNLTIEIQK 138
Query: 119 DALLLASQDESEWPLLPPLPSYGRGR-------DEPGGRFSSLIFGTNLTDVVVTG-GNA 170
DA+LL + + +P+LP L S G EP F+SL+ G + +V + G G
Sbjct: 139 DAVLLGVSERTLYPILPGLLSSKLGEIYLSSWEGEPAESFASLVTGIGVENVRIIGQGVI 198
Query: 171 TINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQ 230
N + WW + K+ RP I + N+ I +T+ +SPSW VHP++ ++ +
Sbjct: 199 DANANFDDWWFNPKVKRI-AWRPRSIFLNRCKNILIEGITIRNSPSWTVHPLFCKDLKLL 257
Query: 231 GLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLII 290
L I P +SPNTDGINP+SC+N I I GDDCVAVK+G E K +P++++ I
Sbjct: 258 TLNIVNPKNSPNTDGINPESCSNVLIAGCRISVGDDCVAVKAGKYEVKQKFDVPSENIEI 317
Query: 291 RRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRM 350
R + + A+ +GSEMS G+++V+ + +NT G+RIKT RG YV EI ++ +
Sbjct: 318 RNCL-MEHGHGAVVIGSEMSCGVRNVKVSNCLFVNTDRGLRIKTRRERGGYVDEIELKNV 376
Query: 351 TMKTMKYVFWMTGDY--GSHPDPGFDPKAL--------PTVTGINYRDMVADNV-TQSAK 399
M + + Y G+ DP + + PT+ I ++++ ++V + +A
Sbjct: 377 QMNGVFVPLAINCFYNCGADYDPLYSSDKVVADVNERTPTIGSIVMKNVLCEDVKSMAAF 436
Query: 400 LDGIRNDPFTGICISNVTIKLTEK 423
+ G+ I + NV I+++++
Sbjct: 437 VYGLPEKKIEKIYMENVRIEISKE 460
>gi|332685997|ref|YP_004455771.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
gi|332370006|dbj|BAK20962.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
Length = 442
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 124/375 (33%), Positives = 191/375 (50%), Gaps = 24/375 (6%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L DF + DG + +TKAF AI + GG ++ PPG +LTG L S+ I
Sbjct: 8 LQDFSPIADGISLDTKAFEAAIKVAER---QGGGHIVAPPGTYLTGPIRLISNLVFEIQA 64
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A LL + D ++P++ R + I+G NLT+V++TG + T++GQG
Sbjct: 65 GATLLFTDDVEQFPIVD-----SRLEGVKSKAYMPCIYGKNLTNVILTG-SGTLDGQGTN 118
Query: 179 WWIKYRK--KQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRA 236
WW +R+ ++ RPYLI +S + IS+L L SPSW VHP+ +V IQ ++I
Sbjct: 119 WWKLHRETPEKLAYPRPYLIGFDYSSRITISDLNLTMSPSWTVHPMECYDVTIQNISILN 178
Query: 237 PIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICI 296
P DSPNTDGI+P+SC N RI + I GDDC+A+KSG ++ +++ I +
Sbjct: 179 PADSPNTDGIDPESCKNLRILNCNIDVGDDCIAIKSGTEQTTTSKS-ACENITISNCTMV 237
Query: 297 SPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK 356
A+ LGSEMS I++V + T G+R+KT GRG V+ I V + M+ +
Sbjct: 238 H-GHGAVVLGSEMSRNIRNVTISNCVFQQTDRGIRMKTRRGRGGVVENITVSTIVMEDVL 296
Query: 357 YVFWMTGDYGSHP----------DPGFDPKALPTVTGINYRDMVADNVTQSAK-LDGIRN 405
F + Y P +P K P I++ ++VA V + + G+
Sbjct: 297 CPFVINAYYFCGPKGKEKYVWDKNPYPITKETPCFRSIHFSNIVAKKVRAAEGFIYGLPE 356
Query: 406 DPFTGICISNVTIKL 420
P + +N+ I++
Sbjct: 357 MPVQDVSFTNIQIEM 371
>gi|413941560|gb|AFW74209.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
gi|413941561|gb|AFW74210.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
Length = 280
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 123/178 (69%), Gaps = 1/178 (0%)
Query: 52 CRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLI-VPPGKWLTGSFNLTS 110
R+ A + +FG VGDG T NT AF A++ L A GG + VPPG+WLTGSFNLTS
Sbjct: 83 AREVWASVEEFGAVGDGATLNTAAFRRAVAELGARAVGGGGARLDVPPGRWLTGSFNLTS 142
Query: 111 HFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNA 170
FTL++H+ A++L SQD EWPL+ PLPSYGRGR+ G R SLI G L DVV+TG N
Sbjct: 143 RFTLFLHRGAVILGSQDPEEWPLITPLPSYGRGRERLGPRHISLIHGEGLNDVVITGSNG 202
Query: 171 TINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
TI+GQG WW +R + N TR +LIE++ S NV IS++TL +SP W VHPVY +VL
Sbjct: 203 TIDGQGHMWWELWRNRTLNHTRGHLIELVNSTNVLISSVTLSNSPFWTVHPVYCRSVL 260
>gi|356494975|ref|XP_003516356.1| PREDICTED: uncharacterized protein LOC100783583 [Glycine max]
Length = 1470
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/195 (53%), Positives = 132/195 (67%), Gaps = 17/195 (8%)
Query: 58 VLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
V+++F VG S F + L + +A + V GKW F L YI
Sbjct: 1012 VISNFDLVGAAAESGDDEFTAKLRYLFELSA---TETDVAFGKW----FGLR-----YI- 1058
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
D LL S+ S + L L SYGRGRD P GRFSSLIFGTNLTDV++TG N TI+GQG
Sbjct: 1059 -DTLLDHSK--SMFQTLLLLYSYGRGRDAPDGRFSSLIFGTNLTDVIITGYNGTIDGQGC 1115
Query: 178 PWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAP 237
WW K+ K + +TRPY+IE+MFSD++QISNLTLI+SPSW VHP+Y+S+++IQGLTI AP
Sbjct: 1116 YWWDKFHKGELKLTRPYMIEIMFSDHIQISNLTLINSPSWFVHPIYTSDIIIQGLTILAP 1175
Query: 238 IDSPNTDGINP-DSC 251
+DSPNTDGI+P DSC
Sbjct: 1176 VDSPNTDGIDPGDSC 1190
>gi|59044763|gb|AAW84064.1| pectate lyase [uncultured bacterium]
Length = 466
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/371 (32%), Positives = 195/371 (52%), Gaps = 23/371 (6%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
FG DG+T +T A AI AA GG + +P G++LTG L SH L++ A
Sbjct: 13 FGAQPDGETPSTAAITAAIETC---AAAGGGVVYIPAGRFLTGPLRLKSHVRLHLEAGAH 69
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWI 181
LL SQD +++P+L R + ++ I+G +L V +TG TI+G+GE WW
Sbjct: 70 LLFSQDPADYPVLET-----RWEGKEVLTYAHQIYGEDLEGVAITG-RGTIDGRGETWWR 123
Query: 182 KYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSP 241
+R K F RP LI ++ I +TL++SP+W ++PV V I +TI P DSP
Sbjct: 124 LFRAKAFTHPRPRLIAFTRCKDILIEGVTLVNSPAWTINPVMCERVTIDKVTIINPPDSP 183
Query: 242 NTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSA 301
NTDGI+PDS N I + YI GDDC+A+K+G ++ + P ++++I + +
Sbjct: 184 NTDGIDPDSSRNVYITNCYIDVGDDCIAIKAGREDSLYRT--PCENIVIANCL-MRHGHG 240
Query: 302 AIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTM--KYVF 359
+ +GSE SGGI+ V + +T G+R+K+ GRG +V+++ + M+ + +V
Sbjct: 241 GVVIGSETSGGIRKVVITNCIFEDTDRGIRLKSRRGRGGFVEDLRATNIIMEKVLCPFVL 300
Query: 360 WMTGDYG-------SHP-DPGFDPKALPTVTGINYRDMVADNVTQSAK-LDGIRNDPFTG 410
M D G +H +P +A P+ +++ + A V +A L G+ P
Sbjct: 301 NMYYDTGGGVIDERAHDLEPHPVSEATPSFRRLSFSHITAREVQAAAAFLYGLPEQPLED 360
Query: 411 ICISNVTIKLT 421
+ ++ I+L
Sbjct: 361 VLFDDIWIELA 371
>gi|240144096|ref|ZP_04742697.1| putative polygalacturonase [Roseburia intestinalis L1-82]
gi|257203884|gb|EEV02169.1| putative polygalacturonase [Roseburia intestinalis L1-82]
gi|291536249|emb|CBL09361.1| Endopolygalacturonase [Roseburia intestinalis M50/1]
Length = 518
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 131/404 (32%), Positives = 196/404 (48%), Gaps = 39/404 (9%)
Query: 46 EFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGS 105
EF LN R DFG GDGK +TK AI A +++++P G + S
Sbjct: 79 EFVTLNVR-------DFGATGDGKQDDTKFIQAAI-----LACPKESRVLIPKGSYRITS 126
Query: 106 FNLTSHFTLYIHKDALLLASQDESEWPLLPPL-PSY--------GRGRDEPGGRFSSLIF 156
L S+ L + K A L+A D + +P P + SY G P F+ +I
Sbjct: 127 LFLKSNLRLELAKGAELIADTDRAAYPKFPGMIESYDEQGEYNLGTWEGNPLPMFAGIIT 186
Query: 157 GTNLTDVVVTGGNATINGQG--EPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDS 214
G ++ +V++ G TING E WW K K RP L + NV + +T +S
Sbjct: 187 GLDVENVLIYG-RGTINGNASKENWW-KNPKVMVGAFRPRLFFLSHCQNVTLCGVTFKNS 244
Query: 215 PSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGW 274
PSW +HP +S N+ GLTI P DSPNTDG++P+SC N I GDDC+AVKSG
Sbjct: 245 PSWTLHPYFSDNLKFYGLTINNPSDSPNTDGLDPESCKNVDIVGVKFSLGDDCIAVKSGK 304
Query: 275 DEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKT 334
G K P++++ IR+ + + A+ +GSEM+GG+K++ E+ +T G+RIKT
Sbjct: 305 IYMGKKYRTPSENIHIRQCL-MENGHGAVTVGSEMAGGVKNLVVEECRFYDTDRGLRIKT 363
Query: 335 AVGRG--AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFD----------PKALPTVT 382
GRG A + +I R++ M + F + Y PD + P +
Sbjct: 364 RRGRGKDAVLDQIIFRKIDMDQVMTPFVINCFYFCDPDGKTEFVQSREKMPVDDGTPAIL 423
Query: 383 GINYRDMVADNV-TQSAKLDGIRNDPFTGICISNVTIKLTEKPK 425
+++ D+ A N +A DG+ I + N+T+ + PK
Sbjct: 424 RLDFEDIKAQNCHVAAAYFDGLPEQKIEQIIMKNITVTYAKNPK 467
>gi|302143794|emb|CBI22655.3| unnamed protein product [Vitis vinifera]
Length = 160
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/146 (62%), Positives = 108/146 (73%), Gaps = 4/146 (2%)
Query: 331 RIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMV 390
IKT + RG YVK+IYVRRMTMKTM++ FW+ GDYG P PG + P + GINYRDMV
Sbjct: 4 EIKTGLERGGYVKDIYVRRMTMKTMRFAFWIIGDYGPPPAPGHEG---PVIEGINYRDMV 60
Query: 391 ADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELL- 449
ADNVT A+L GI PFTG CISNVTI LTE+ ++ QW+C +QGITSRVTPQ C+LL
Sbjct: 61 ADNVTYPAQLHGISGGPFTGFCISNVTIGLTEESRKQQWDCDEVQGITSRVTPQPCDLLS 120
Query: 450 PKKEPTDCFFPDDKLPIDDVRLNTCS 475
P KE +C FP D LPI+DV+L CS
Sbjct: 121 PSKEILNCPFPKDLLPIEDVKLRICS 146
>gi|448413184|ref|ZP_21577030.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
gi|445667365|gb|ELZ20009.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
Length = 515
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 130/392 (33%), Positives = 186/392 (47%), Gaps = 42/392 (10%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG VG G +T A +A L + A GG ++VP GK+LTG + SH TL +
Sbjct: 10 VRDFGAVGTGDERDTAALQSA---LDECAGTGGT-VVVPSGKYLTGPLTVGSHTTLELEA 65
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A L +D P S G ++ G F + +V +T G T++GQG+
Sbjct: 66 GATLSFVRDHE---AFPARESRWEGWEQTG--FHPCLLVAEAENVEIT-GRGTVDGQGDY 119
Query: 179 WWIKY-------------RKKQFN------------VTRPYLIEVMFSDNVQISNLTLID 213
WW Y R F+ RP L +V S NV +S +TL +
Sbjct: 120 WWQFYGVDDDELPASLADRLDSFHEANDKADDVSSFTLRPPLFQVDRSTNVSVSGITLRN 179
Query: 214 SPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSG 273
SP WN H VYS NV + + + P D+PN DGI+ DS RI D Y+ +GDD V +KSG
Sbjct: 180 SPFWNTHVVYSDNVTLHDVNVENPADAPNGDGIDIDSSRYVRISDCYLNAGDDAVCIKSG 239
Query: 274 WDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIK 333
DE G ++G P + + + + +GSEMSG ++DV + T +T G+RIK
Sbjct: 240 KDEEGRRIGRPASGITVTNCT-VEAGHGGVVIGSEMSGDVRDVTVSNCTFTDTDRGIRIK 298
Query: 334 TAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDP----KALPTVTGINYRDM 389
T GRG V++ + M+ + F + G Y D DP ++ P V I Y D+
Sbjct: 299 TQRGRGGVVEDCRFDNLVMRRVACPFTINGYYFMDIDS--DPIPVDESTPMVRNIAYSDI 356
Query: 390 VADNVTQSAKLDGIRNDPFTGICISNVTIKLT 421
+A +V + G+ F I SNV I T
Sbjct: 357 IARDVETAGFFAGLPEQRFENISFSNVEIDAT 388
>gi|291538883|emb|CBL11994.1| Endopolygalacturonase [Roseburia intestinalis XB6B4]
Length = 518
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 131/404 (32%), Positives = 196/404 (48%), Gaps = 39/404 (9%)
Query: 46 EFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGS 105
EF LN R DFG GDGK +TK AI A +++++P G + S
Sbjct: 79 EFVTLNVR-------DFGATGDGKQDDTKFIQAAI-----LACPKESRVLIPKGSYRITS 126
Query: 106 FNLTSHFTLYIHKDALLLASQDESEWPLLPPL-PSY--------GRGRDEPGGRFSSLIF 156
L S+ L + K A L+A D + +P P + SY G P F+ +I
Sbjct: 127 LFLKSNLRLELAKGAELIADTDRAVYPKFPGMIESYDEQGEYNLGTWEGNPLPMFAGIIT 186
Query: 157 GTNLTDVVVTGGNATINGQG--EPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDS 214
G ++ +V++ G TING E WW K K RP L + NV + +T +S
Sbjct: 187 GLDVENVLIYG-RGTINGNASKENWW-KNPKVMVGAFRPRLFFLSHCQNVTLCGVTFKNS 244
Query: 215 PSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGW 274
PSW +HP +S N+ GLTI P DSPNTDG++P+SC N I GDDC+AVKSG
Sbjct: 245 PSWTLHPYFSDNLKFYGLTINNPSDSPNTDGLDPESCKNVDIVGVKFSLGDDCIAVKSGK 304
Query: 275 DEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKT 334
G K P++++ IR+ + + A+ +GSEM+GG+K++ E+ +T G+RIKT
Sbjct: 305 IYMGKKYRTPSENIHIRQCL-MENGHGAVTVGSEMAGGVKNLVVEECRFYDTDRGLRIKT 363
Query: 335 AVGRG--AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFD----------PKALPTVT 382
GRG A + +I R++ M + F + Y PD + P +
Sbjct: 364 RRGRGKDAVLDQIIFRKIDMDQVMTPFVINCFYFCDPDGKTEFVQSREKMPVDDGTPAIL 423
Query: 383 GINYRDMVADNV-TQSAKLDGIRNDPFTGICISNVTIKLTEKPK 425
+++ D+ A N +A DG+ I + N+T+ + PK
Sbjct: 424 RLDFEDIKAQNCHVAAAYFDGLPEQKIEQIIMKNITVTYAKNPK 467
>gi|269119326|ref|YP_003307503.1| glycoside hydrolase family protein [Sebaldella termitidis ATCC
33386]
gi|268613204|gb|ACZ07572.1| glycoside hydrolase family 28 [Sebaldella termitidis ATCC 33386]
Length = 509
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/387 (32%), Positives = 195/387 (50%), Gaps = 28/387 (7%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ +FG VGDGKT NT A TAI +A + + + G +LTG L S+ T+ I
Sbjct: 84 IREFGAVGDGKTVNTFAIQTAI-----LSAPENSIIEIRDGNYLTGPVLLKSNITINIAG 138
Query: 119 DALLLASQDESEWPLLPPLPS-------YGRGRDEPGGRFSSLIFGTNLTDVVVTGGNAT 171
+A L A ++ +P+LP + G EP F+SL G ++ +V +TG T
Sbjct: 139 NARLTALKEREMYPILPASINKADRTFYLGSWEGEPAACFASLFTGVSVNNVNITG-EGT 197
Query: 172 INGQG--EPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
I+G E WW + K+ + RP I + N+ I + + +SPSW +HPV+SSN+
Sbjct: 198 IDGNSDRETWWKDAKIKRIS-WRPRTIFLTDCSNINIVGINIENSPSWTLHPVFSSNLGF 256
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
+ IR P DSPNTDGI+P+SC N I GDDC+A+KSG + G ++G+P++++
Sbjct: 257 FDMKIRNPKDSPNTDGIDPESCKNVSIIGVKFSVGDDCIAIKSGKGKIGREIGIPSENIN 316
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRR 349
I + + +GSEMSGGIK+V ++ NT G+RIKT GRG + I+
Sbjct: 317 IENC-HMEFGHGGVVIGSEMSGGIKNVNIKNCLFENTDRGLRIKTRRGRGGIIDGIHAEN 375
Query: 350 MTMKTMKYVFWMTGDYGSHPDPGFD----------PKALPTVTGINYRDMVADNVTQSAK 399
+ M + F + Y D + + P + I +++MV N A
Sbjct: 376 IVMDKVLTPFVINEFYYCDSDGKTEYVWNKDKLEITEETPVIKNITFKNMVCKNSEVCAG 435
Query: 400 -LDGIRNDPFTGICISNVTIKLTEKPK 425
+ G+ + + N+TI E P+
Sbjct: 436 FMYGLPERKIERVVLENLTIDFAEDPR 462
>gi|393201099|ref|YP_006462941.1| endopolygalacturonase [Solibacillus silvestris StLB046]
gi|327440430|dbj|BAK16795.1| endopolygalacturonase [Solibacillus silvestris StLB046]
Length = 449
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/389 (31%), Positives = 195/389 (50%), Gaps = 30/389 (7%)
Query: 53 RKHSAV---LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLT 109
++HS + FG VGDG +NT A A+ S+ GG + VP G ++TG+ +
Sbjct: 2 QQHSTAVYNIEQFGAVGDGWANNTSAIKRAVEACSQ---GGGGTIYVPAGVFVTGAIEMK 58
Query: 110 SHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGN 169
S+ L++ + LL S D +++P++ G RD + S I+ + ++ +TG
Sbjct: 59 SNMHLHLEAGSELLFSNDRADYPVISSRWE-GASRD----VYMSCIYACHAENIAITGF- 112
Query: 170 ATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
T+NGQG WW +++ RP L+ + V I + +IDSPSW VHP NV I
Sbjct: 113 GTLNGQGAYWWKLFKEDSLAYPRPNLVSFDHCERVHIEQVKMIDSPSWTVHPNDCDNVTI 172
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
G++I P +SPNTDGINP+SC N +I D I GDDC+A+K+G ++ + +P +++
Sbjct: 173 SGVSIVNPANSPNTDGINPESCRNVKISDCSIDVGDDCIAIKAGTED--AERAIPCENIT 230
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRR 349
I + + GSEMSG I++V + T G+R K+ GRG ++ I V
Sbjct: 231 ITNCTMLH-GHGGVVFGSEMSGDIRNVVVSNCIFEGTDRGIRFKSRRGRGGTIENIRVNN 289
Query: 350 MTMKTMKYVFWMTGDYGSHPDPGFDPKA-----------LPTVTGINYRDMVADNVTQSA 398
+ M + F + Y H G +P P I++ ++ A +VT +A
Sbjct: 290 IVMNNVICPFILN-LYYYHGPRGMEPYVWDKEVQPVTALTPKFRHIHFSNITATDVTAAA 348
Query: 399 K-LDGIRNDPFTGICISNVTI--KLTEKP 424
+ G+ P I S++ I KL +P
Sbjct: 349 GFMYGLPEMPVEDITFSHIRIAMKLDAEP 377
>gi|295102197|emb|CBK99742.1| Endopolygalacturonase [Faecalibacterium prausnitzii L2-6]
Length = 518
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 127/391 (32%), Positives = 194/391 (49%), Gaps = 32/391 (8%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
+G V DG+T NT A+S + G + VP G++ T S + S TLY+ K A+
Sbjct: 87 YGLVADGETDNTGRLQAALSTCPR-----GGTVYVPAGRYRTASLFMKSCTTLYLEKGAV 141
Query: 122 LLASQDESEWPLLPPLPSYGRGRDE---------PGGRFSSLIFGTNLTDVVVTG-GNAT 171
LL D + +P+LP + DE P F+ L+ T + DVVVTG G
Sbjct: 142 LLGDNDRTHYPILPGVIPSENEVDEYYLTGWEGNPLNSFAGLLNITQVHDVVVTGEGTLD 201
Query: 172 INGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQG 231
+ Q WWI + K+ RP + ++ S+N+ + +T+ +S SW +HP++ ++ +
Sbjct: 202 CDAQNGDWWIDPKVKRI-AWRPRAVAMVDSENICLHGITVQNSYSWTIHPIFVKHLDLLS 260
Query: 232 LTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIR 291
I P ++PNTDGI+P+SC TRI I GDDC+A+K+ G+K+ +H +IR
Sbjct: 261 FNINNPYNAPNTDGIDPESCEYTRIIGVNIHVGDDCIAMKASKVFLGMKLKKSCEHTVIR 320
Query: 292 RLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG--AYVKEIYVRR 349
+ + I +GSEMSGG+KD+ +T G+R+KT GRG A + + R
Sbjct: 321 NCL-LDKGHGGIVIGSEMSGGVKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVIDGLVFRN 379
Query: 350 MTMKTMKYVFWMTGDYGSHPDPGFDP-----KALPT------VTGINYRDMVA-DNVTQS 397
+ M+ +K F + Y PD G P +ALP + + D+VA D
Sbjct: 380 VEMRGVKAPFVINMFYFCDPD-GHSPYVQCREALPVDEYTPKLGTLTMEDIVATDAQFAG 438
Query: 398 AKLDGIRNDPFTGICISNVTIKLTEKPKELQ 428
DG+ P G+ + NVTI KE Q
Sbjct: 439 CYFDGLPEQPIEGVSMKNVTITFDPDAKEGQ 469
>gi|289578915|ref|YP_003477542.1| glycoside hydrolase family protein [Thermoanaerobacter italicus
Ab9]
gi|289528628|gb|ADD02980.1| glycoside hydrolase family 28 [Thermoanaerobacter italicus Ab9]
Length = 519
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 192/395 (48%), Gaps = 30/395 (7%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
K + DFG GDGKT +T AI Y+ G ++ P G +LTG L S+
Sbjct: 81 EKFMVNVRDFGAKGDGKTIDTSFIQAAI-----YSCPEGGRVFFPGGIYLTGPIFLKSNI 135
Query: 113 TLYIHKDALLLASQDESEWPLLP-PLPSYGRGRD--------EPGGRFSSLIFGTNLTDV 163
TL + KDA+LL + D + +P+LP + S + E F+SLI G N+ +V
Sbjct: 136 TLELSKDAVLLGANDRNLYPILPNTIKSQNSDEELYLATWEGEAAECFASLITGINIENV 195
Query: 164 VVTGGNATINGQG--EPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHP 221
+ G TI+G E WW +++ K+ RP + + N+ I LT+ +SP+W +HP
Sbjct: 196 NIIG-EGTIDGNANFETWWKEHKIKK-GAWRPRTVFLNQCKNILIEGLTIKNSPAWTIHP 253
Query: 222 VYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKV 281
S N+ LTI P +SPNTDG+NP++ N I GDDC+A+KSG + K+
Sbjct: 254 FQSENLKFINLTIENPQNSPNTDGLNPEASKNVLILGCKFSVGDDCIAIKSGKFDMAQKL 313
Query: 282 GMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAY 341
G T+ + +R + + +GSEMSGG+K+V E NT G+RIKT GRG +
Sbjct: 314 GKLTEKVFVRNCY-MEYGHGGVVIGSEMSGGVKEVYVEKCIFNNTDRGIRIKTRRGRGGF 372
Query: 342 VKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFD----------PKALPTVTGINYRDMVA 391
+ EI+ ++ M +K F + Y D + K P + I +D+
Sbjct: 373 IDEIHADKIRMNRVKTPFTINSFYFCDSDGKTEYVWSKEKLPIDKRTPYIGNIYLKDIGC 432
Query: 392 DNVTQSAK-LDGIRNDPFTGICISNVTIKLTEKPK 425
N +A + G+ + + N+ + E K
Sbjct: 433 TNTQVAAGFMYGLPERKIEKVIMENIYVHFDENAK 467
>gi|391227888|ref|ZP_10264095.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
gi|391223381|gb|EIQ01801.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
Length = 916
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 198/404 (49%), Gaps = 53/404 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ D G G NT+A AI ++ GG ++VPPG WLTG+ + S L++
Sbjct: 22 IRDHGARPGGALLNTRAIAEAIQACAR---QGGGHVVVPPGIWLTGAIHFRSRIDLHLEA 78
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGG----RFSSLIFGTNLTDVVVTGGNATING 174
A L SQ+ ++ LP+ R GG +S ++ D+ +TG +NG
Sbjct: 79 GAELRFSQNPDDY-----LPAVLSQR---GGVMIYNYSPFLYAHRCEDISITGAG-LLNG 129
Query: 175 QGEPWWIKYRKKQFNVT---------------------------RPYLIEVMFSDNVQIS 207
QG+ WW ++ Q ++ RP + + V I
Sbjct: 130 QGQSWW-PWKHSQPGMSSIQGPDNFAALRTPLEERVFGTREAGVRPVFCQPIECKRVLIE 188
Query: 208 NLTLIDSPSWNVHPVYSSNVLIQGLTIRAP--IDSPNTDGINPDSCTNTRIEDNYIVSGD 265
+T DSPSW + PV+ S+++I+ TI P + S NTDGI+PD+C N IE + +GD
Sbjct: 189 GVTFRDSPSWTLQPVWCSDLIIRHSTILNPPSLFSHNTDGIDPDACRNVLIEHCVVDTGD 248
Query: 266 DCVAVKSGWDEYGIKVGMPTQHLIIRRLIC-ISPDSAAIALGSEMSGGIKDVRAEDITAI 324
D + +K+G DE + G+P+++++IR C I I +GSEMS G++++ A D T
Sbjct: 249 DAICIKAGRDEDAWEAGIPSENILIRH--CEIRSGHGGITIGSEMSAGVRNLHAHDCTCD 306
Query: 325 NTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDPGFDPKAL---PT 380
T + +RIKT GRG ++K+I + +T + +++ +T YG + DPK L P
Sbjct: 307 GTDTAIRIKTKPGRGGFIKDILIENITARRIRHAAVELTFHYGDTLEKPPDPKNLKHVPA 366
Query: 381 VTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKP 424
V I R++ D+ ++ L G+ P + + N+ I + P
Sbjct: 367 VENILIRNVRCDSAREALHLRGLPGHPLKNVTLQNLEIHAFQNP 410
>gi|406667543|ref|ZP_11075299.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
gi|405384596|gb|EKB44039.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
Length = 448
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 121/381 (31%), Positives = 192/381 (50%), Gaps = 26/381 (6%)
Query: 54 KHSAV---LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTS 110
+HS+ + FG VGDG +NT A A+ S+ GG + VP G ++TG+ L S
Sbjct: 2 QHSSAVYNIEQFGAVGDGWANNTSAIKRAVEACSQ---GGGGTVYVPAGVFVTGAIELKS 58
Query: 111 HFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNA 170
+ L++ + LL S D ++P++ G RD + S I+ + ++ +TG
Sbjct: 59 NMHLHLEAGSELLFSNDREDYPVISSRWE-GASRD----VYMSCIYACHAKNIAITGF-G 112
Query: 171 TINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQ 230
T+NGQG WW +++ RP L+ + V + + +IDSPSW VHP NV I
Sbjct: 113 TLNGQGAYWWKLFKEDALAYPRPNLVSFDHCERVHVEQVKMIDSPSWTVHPNDCDNVTIS 172
Query: 231 GLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLII 290
++I P +SPNTDGINP+SC N RI D I GDDC+A+KSG ++ + +P +++ I
Sbjct: 173 AVSIVNPANSPNTDGINPESCRNVRISDCSIDVGDDCIAIKSGTED--AERVIPCENITI 230
Query: 291 RRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRM 350
+ + GSEMSG I++V + T G+R K+ GRG ++ I V +
Sbjct: 231 TNCTMLH-GHGGVVFGSEMSGDIRNVVVSNCIFEGTDRGIRFKSRRGRGGTIENIRVNNI 289
Query: 351 TMKTMKYVFWMTGDYGSHP---DPGFDPKALPTVTG-------INYRDMVADNVTQSAK- 399
M + F + Y P +P K + VT I++ ++ A +VT +A
Sbjct: 290 VMNNIICPFILNLYYYHGPRGMEPYVSDKEVQPVTALTPKFRHIHFSNITATDVTAAAGF 349
Query: 400 LDGIRNDPFTGICISNVTIKL 420
+ G+ P I S++ I +
Sbjct: 350 MYGLPEMPVEDITFSHIRIAM 370
>gi|356566220|ref|XP_003551332.1| PREDICTED: uncharacterized protein LOC100780755 [Glycine max]
Length = 366
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 90/144 (62%), Positives = 106/144 (73%)
Query: 17 IKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAF 76
++ + TLL Q EC+ E+ A+NCRKHSAVLTDFGGVGDGKTSNTK F
Sbjct: 99 LRYIDTLLDRSESMFQDRECKVANGLDCFEYPAINCRKHSAVLTDFGGVGDGKTSNTKGF 158
Query: 77 NTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPP 136
AISNLS YA+DGGA L+VPPGKWLTGSFNLTSHFTL++ K+A +L SQDES+WP LP
Sbjct: 159 QYAISNLSHYASDGGALLVVPPGKWLTGSFNLTSHFTLFLQKEATILGSQDESKWPTLPV 218
Query: 137 LPSYGRGRDEPGGRFSSLIFGTNL 160
LPSYGRGRD P G+ +I G +
Sbjct: 219 LPSYGRGRDAPYGQGDIIIQGLTI 242
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 221 PVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRI 256
P +++IQGLTI APIDSPNTDGI+ + + I
Sbjct: 229 PYGQGDIIIQGLTILAPIDSPNTDGIDLEDSVSVLI 264
>gi|307718144|ref|YP_003873676.1| hypothetical protein STHERM_c04310 [Spirochaeta thermophila DSM
6192]
gi|306531869|gb|ADN01403.1| hypothetical protein STHERM_c04310 [Spirochaeta thermophila DSM
6192]
Length = 462
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/416 (30%), Positives = 194/416 (46%), Gaps = 58/416 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+T G G +T AF A LS+ A GG +L VPPG +L G L SH + +
Sbjct: 5 VTTLGADPTGLRESTDAFREA---LSRIEAAGGGRLHVPPGDYLVGPLRLCSHLEFEVAR 61
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A + QD +P++ + R ++ ++F DV ++GG I+GQG
Sbjct: 62 GARIRFVQDPDRYPVV-----FTRWEGVECHAYAPMLFVEGAEDVRISGG-GVIDGQGAS 115
Query: 179 WWIKYRK---------------------------------KQFNVTRPYLIEVMFSDNVQ 205
WW YR ++ + RP L++V S V
Sbjct: 116 WWRMYRDYREGRLTRFPFSSVEEIARRNAHLSTKASGGGGRESHFLRPPLLQVKDSRRVV 175
Query: 206 ISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGD 265
I + L +S WN H +YS V I+G++ P D+PNTDG+N DS N RIED GD
Sbjct: 176 IEGIVLRNSAFWNTHILYSDEVWIRGVSFENPPDAPNTDGLNVDSSRNVRIEDCTFDVGD 235
Query: 266 DCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN 325
DC+ +KSG DE G +VG PT+H++IR I + I GSE++GG+++V +
Sbjct: 236 DCLGLKSGIDEDGRRVGRPTEHVVIRGCI-MRRGHGGIVCGSEIAGGVRNVVVTGCIFQD 294
Query: 326 TQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDP---------- 375
T G+RIK+ GRG +V+ + + ++ M+ + + Y DPG +
Sbjct: 295 TDRGIRIKSRRGRGGFVENVMIHQIVMERVLVPLVVNLYYRCGIDPGEEEIVSRLASLLP 354
Query: 376 ----KALPTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNVTIKLTEKPKE 426
+ P V I+ ++A V SA L G+ P G+ +S+ + + E+ +E
Sbjct: 355 LPVDETTPAVRNISISQVLATGVKSSAGFLLGLPERPIEGLVLSDYRVFMDEEGQE 410
>gi|386346149|ref|YP_006044398.1| glycoside hydrolase family protein [Spirochaeta thermophila DSM
6578]
gi|339411116|gb|AEJ60681.1| glycoside hydrolase family 28 [Spirochaeta thermophila DSM 6578]
Length = 462
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/416 (30%), Positives = 193/416 (46%), Gaps = 58/416 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+T G G +T AF A LS+ GG +L VPPG +L G L SH + +
Sbjct: 5 VTTLGADPTGLRESTDAFREA---LSRIEGAGGGRLHVPPGDYLVGPLRLCSHLEFEVAR 61
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A + QD +P++ + R ++ +IF D+ ++GG I+GQG+
Sbjct: 62 GARIRFVQDPDRYPVV-----FTRWEGVECHAYAPMIFVEGAEDIRISGG-GVIDGQGDA 115
Query: 179 WWIKYRK---------------------------------KQFNVTRPYLIEVMFSDNVQ 205
WW YR ++ + RP L++V S V
Sbjct: 116 WWRMYRDYREGRVTRFPFSSVEEIARRNAHLSTKASGGGGRESHFLRPPLLQVKDSRRVV 175
Query: 206 ISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGD 265
I + L +S WN H +YS V I+G++ P D+PNTDG+N DS N RIED GD
Sbjct: 176 IEGIILRNSAFWNTHILYSDEVWIRGVSFENPPDAPNTDGLNVDSSRNVRIEDCTFDVGD 235
Query: 266 DCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN 325
DC+ +KSG DE G +VG PT+H++IR I + I GSE++GG+++V +
Sbjct: 236 DCLGLKSGIDEDGRRVGRPTEHVVIRGCI-MRRGHGGIVCGSEIAGGVRNVVVTGCIFQD 294
Query: 326 TQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDP---------- 375
T G+RIK+ GRG +V+ + V ++ M+ + + Y DPG +
Sbjct: 295 TDRGIRIKSRRGRGGFVENVMVHQIVMERVLVPLVVNLYYRCGIDPGEEETISRLASLLP 354
Query: 376 ----KALPTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNVTIKLTEKPKE 426
+ P V I+ + A V SA L G+ P G+ +S+ + + E+ +E
Sbjct: 355 LPVDETTPAVRNISISQVFATGVKSSAGFLLGLPERPIEGLMLSDYRVVMDEEGQE 410
>gi|266623900|ref|ZP_06116835.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288864287|gb|EFC96585.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 537
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 137/421 (32%), Positives = 216/421 (51%), Gaps = 40/421 (9%)
Query: 46 EFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGS 105
EF LN R+ FG GDG +T A TAI++ K DG ++ +P GK+L S
Sbjct: 78 EFVTLNVRR-------FGAKGDGIHDDTLAIQTAIASCPK---DG--RVYIPEGKYLVTS 125
Query: 106 FNLTSHFTLYIHKDALLLASQDESEWPLLPPL-PSY--------GRGRDEPGGRFSSLIF 156
L S FTL I K+A+LL + ++ +LP + SY G P F+S+I
Sbjct: 126 LFLKSDFTLDIGKNAVLLGHAEREKFGVLPGMIQSYDETGEYNLGSWEGNPLDIFTSMIT 185
Query: 157 GTNLTDVVVTGGNATINGQG--EPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDS 214
G ++++VV+TG T++G + WW R K RP ++ + D+V + +T+ +S
Sbjct: 186 GIHVSNVVITG-EGTLDGCATFDDWWEDDRAKII-AFRPRMVFLNHCDHVVLHGVTIQNS 243
Query: 215 PSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGW 274
PSWN+HP +S ++ LTI P DSPNTDG++P+S I Y GDDC+A+KSG
Sbjct: 244 PSWNLHPYFSDDLRFLDLTILNPWDSPNTDGMDPESVNGLEIAGIYFSLGDDCIALKSGK 303
Query: 275 DEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKT 334
G K +P+Q++ +R+ C++ A+ +GSEM+ G+K V +D ++T G+RIKT
Sbjct: 304 YYMGHKYKVPSQNIEVRQC-CMNNGHGAVTIGSEMAAGVKHVHVKDCLFLHTDRGLRIKT 362
Query: 335 AVGRG--AYVKEIYVRRMTMKTMKYVFWMTGDYG-SHPDPGFD----------PKALPTV 381
GRG A V++I + M + F + Y PD D + P+V
Sbjct: 363 RRGRGKDAVVEDICFENIRMDHVLTPFVLNSFYNCCDPDCHSDYVKCKSPLPVDERTPSV 422
Query: 382 TGINYRDMVADNV-TQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSR 440
+ +R++ A N A L G+ + +VTI E P+ + + G+T++
Sbjct: 423 KQMVFRNIEAHNCHVAGAFLYGLPEKKVDYVEFDHVTIDYDENPEPDEPAMMDDIGLTAK 482
Query: 441 V 441
+
Sbjct: 483 M 483
>gi|392939365|ref|ZP_10305009.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
gi|392291115|gb|EIV99558.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
Length = 519
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 171/329 (51%), Gaps = 19/329 (5%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
K + DFG GDGKT +T AI Y+ G ++ P G +LTG L S+
Sbjct: 81 EKFMVNVRDFGAKGDGKTIDTSFIQAAI-----YSCPEGGRVFFPGGIYLTGPIFLKSNI 135
Query: 113 TLYIHKDALLLASQDESEWPLLP-PLPSYGRGRD--------EPGGRFSSLIFGTNLTDV 163
TL + KDA+LL + D + +P+LP + S + E F+SLI G N+ +V
Sbjct: 136 TLELSKDAVLLGANDRNLYPILPNTIKSQNSDEELYLATWEGEAAECFASLITGINIENV 195
Query: 164 VVTGGNATINGQG--EPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHP 221
+ G TI+G E WW +++ K+ RP + + N+ I +T+ +SP+W +HP
Sbjct: 196 NIIG-EGTIDGNANFETWWKEHKIKK-GAWRPRTVFLNQCKNILIEGVTIKNSPAWTIHP 253
Query: 222 VYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKV 281
S N+ LTI P +SPNTDG+NP++ N I GDDC+A+K+G + K+
Sbjct: 254 FQSENLKFINLTIENPKNSPNTDGLNPEASKNVLILGCKFSVGDDCIAIKAGKFDMAQKL 313
Query: 282 GMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAY 341
G T+ + +R + + +GSEMSGG+K+V E NT G+RIKT GRG +
Sbjct: 314 GKLTEKVFVRNCY-MEYGHGGVVIGSEMSGGVKEVYVEKCIFNNTDRGIRIKTRRGRGGF 372
Query: 342 VKEIYVRRMTMKTMKYVFWMTGDYGSHPD 370
+ EI+ ++ M +K F + Y D
Sbjct: 373 IDEIHADKIRMNRVKTPFTINSFYFCDVD 401
>gi|255642114|gb|ACU21323.1| unknown [Glycine max]
Length = 203
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 82/101 (81%), Positives = 93/101 (92%)
Query: 191 TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDS 250
TRPYLIE+MFSDN+QISNLTL++SPSWNVHPVYSSN+++QG+TI AP+ SPNTDGINPDS
Sbjct: 99 TRPYLIELMFSDNIQISNLTLLNSPSWNVHPVYSSNIIVQGITIYAPVTSPNTDGINPDS 158
Query: 251 CTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIR 291
CTN RIED YIVSGDDCVAVKSGWDEYGIK G PT+ L+I
Sbjct: 159 CTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIE 199
>gi|218133835|ref|ZP_03462639.1| hypothetical protein BACPEC_01724 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991210|gb|EEC57216.1| polygalacturonase (pectinase) [[Bacteroides] pectinophilus ATCC
43243]
Length = 521
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 130/416 (31%), Positives = 204/416 (49%), Gaps = 41/416 (9%)
Query: 35 ECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQL 94
E P EF LN + DFG G+G+ +T A AI + K ++
Sbjct: 71 EIAPVSVRTDYEFVTLNVK-------DFGAYGNGEHDDTNAIQCAIMSCPK-----AGRI 118
Query: 95 IVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPP-LPSY--------GRGRD 145
+VP G++ S L S TL + K A+L A + ++P+LP + SY G
Sbjct: 119 LVPAGEYKISSIFLKSDITLDLAKGAVLSAFTEREKFPILPGVIESYDETDEYNLGSWEG 178
Query: 146 EPGGRFSSLIFGTNLTDVVVTGGNATINGQG--EPWWIKYRKKQFNVT-RPYLIEVMFSD 202
P FS+++ G N+ +VV+TG TI+G + WW Y K N+ RP L +
Sbjct: 179 NPLDCFSAIVCGINVENVVITG-EGTIDGNAGFDNWW--YNVKVRNIAWRPRLFFINHCR 235
Query: 203 NVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIV 262
NV + +T+ +SPSW +HP +S ++ + I+ P +S NTDG++P+SCT+ R+ YI
Sbjct: 236 NVTMHGITVQNSPSWTLHPYFSDHLKFIDVKIKNPANSHNTDGLDPESCTDVRVLGTYIS 295
Query: 263 SGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDIT 322
GDDC+A+KSG G K +PT + +R+ C+ A+ +GSE++ G+KDV D
Sbjct: 296 VGDDCIAIKSGKIYMGRKHKIPTSDMEVRQC-CMRDGHGAVTVGSEIAAGVKDVHIRDCI 354
Query: 323 AINTQSGVRIKTAVGRG--AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFD----PK 376
+NT G+R+KT GRG + + +I +TM + F + Y PD + K
Sbjct: 355 FMNTDRGLRVKTRRGRGRDSVLDDISFENITMDNVMTPFVVNSFYFCDPDGKTEYVATSK 414
Query: 377 AL------PTVTGINYRDMVADNV-TQSAKLDGIRNDPFTGICISNVTIKLTEKPK 425
AL P + + ++D+ A N A + G+ + NV I + K
Sbjct: 415 ALPVDDRTPAIKRLTFKDIKATNCHVAGAYICGLPESKIERLTFENVDISYADDAK 470
>gi|253573347|ref|ZP_04850690.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. oral taxon
786 str. D14]
gi|251846875|gb|EES74880.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. oral taxon
786 str. D14]
Length = 442
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/379 (31%), Positives = 195/379 (51%), Gaps = 29/379 (7%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ D+G V D S A + ++ + GG ++VP G ++TG+ L SH L +
Sbjct: 6 IVDYGAVKD---SGVPATAAIAAAITAASEAGGGTVVVPAGTFVTGAIFLKSHIELRLSP 62
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGR--FSSLIFGTNLTDVVVTGGNATINGQG 176
A+L S + ++P++ + R E R +S I+G +L +V VTG + ING G
Sbjct: 63 GAVLSFSTNPDDYPVV-------KSRWEGVQREVHASCIYGEDLENVTVTG-SGCINGNG 114
Query: 177 EPWWIKYRKK--QFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTI 234
+PWW K R + + + RP LI V I +++L+DSPSW V+P+ NV I ++I
Sbjct: 115 QPWWEKQRNRPEELHYPRPKLISFDRCRRVTIRDVSLVDSPSWTVNPIRCHNVTIDNVSI 174
Query: 235 RAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLI 294
P DSPNTDGINP+SC+N RI + +I GDDC+A+K+G +E +V P +++ I
Sbjct: 175 LNPADSPNTDGINPESCSNVRISNCHIDVGDDCIAIKAGTEETAERV--PCENITITNCT 232
Query: 295 CISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKT 354
I + +GSEMSG I++V + +T G+R+K+ GRG V++I V + M+
Sbjct: 233 MIH-GHGGVVIGSEMSGNIRNVTISNCVFQHTDRGIRLKSRRGRGGIVEDIRVSNLVMEN 291
Query: 355 MKYVFWMTGDYGSHP----------DPGFDPKALPTVTGINYRDMVADNVTQSAK-LDGI 403
+ F M Y P +P + P I++ D+ A V +A L G+
Sbjct: 292 VICPFIMNLYYFCGPRGKEKYVWDKNPYPVTEETPQFRRIHFSDITAREVHAAAGFLYGL 351
Query: 404 RNDPFTGICISNVTIKLTE 422
+ + + I + +
Sbjct: 352 AEQYISEVTFDQIEISMAK 370
>gi|448373202|ref|ZP_21557548.1| glycoside hydrolase family 28 [Natrialba aegyptia DSM 13077]
gi|445644701|gb|ELY97713.1| glycoside hydrolase family 28 [Natrialba aegyptia DSM 13077]
Length = 544
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/390 (32%), Positives = 187/390 (47%), Gaps = 38/390 (9%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ +FG SNT+A TA L + A GG + VPPG ++TG + TL +
Sbjct: 33 IREFGAQSGSDDSNTEAIQTA---LDECAGTGGT-VSVPPGTYVTGPLRVGDRTTLQLEA 88
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A L D + P + S G D+ G L+ G D V G TI+G GE
Sbjct: 89 GATLRFVGD---YEAFPTVKSRWEGWDQVGFHPCLLVDGA---DTVSITGRGTIDGNGEY 142
Query: 179 WWIKYRK---------------------KQFNVT----RPYLIEVMFSDNVQISNLTLID 213
WW Y + KQ +V+ RP L++V ++NV +S +TL +
Sbjct: 143 WWQFYGEPESTLPDGLQDRLAEFEAQNDKQDDVSSFTHRPPLLQVFDAENVTVSGVTLRN 202
Query: 214 SPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSG 273
SP WN H VYS NV I + I P D+PN DGI+ DS RI D YI +GDD + +KSG
Sbjct: 203 SPFWNTHVVYSENVTITDVNIENPADAPNGDGIDIDSSRYVRISDAYINAGDDAICIKSG 262
Query: 274 WDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIK 333
D G +VG P + + + + +GSEMSG ++DV + T +T G+RIK
Sbjct: 263 KDAEGREVGEPASQITVTNC-TVEAGHGGVVIGSEMSGDVRDVTVTNCTFTDTDRGIRIK 321
Query: 334 TAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDP--KALPTVTGINYRDMVA 391
T GRG V+++ ++ M+ + F + G Y + D +P + P V +++ ++ A
Sbjct: 322 TQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPLDSDPEPIDEGTPLVRNVSFSNITA 381
Query: 392 DNVTQSAKLDGIRNDPFTGICISNVTIKLT 421
NV + G+ F GI +V I T
Sbjct: 382 RNVETAGFFAGLPERYFEGISFRDVRIDAT 411
>gi|413923569|gb|AFW63501.1| hypothetical protein ZEAMMB73_605801 [Zea mays]
Length = 313
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 167/324 (51%), Gaps = 43/324 (13%)
Query: 127 DESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKK 186
DE WPL+P LPSYG GR+ G RF SLI G NL DVV+T
Sbjct: 7 DEKYWPLMPALPSYGYGRERKGPRFGSLIHGQNLRDVVITAFE----------------- 49
Query: 187 QFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGI 246
Y+I V+ + ++ ++ P ++HP + N+L S T +
Sbjct: 50 -------YIIHVLNA----LALYQTLEVPV-DIHPFFY-NIL-----------SILTLAL 85
Query: 247 NPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALG 306
DSC + IE+ YI GDD +A+KSGWD+YGI G P+ ++IR + S SA I++G
Sbjct: 86 VTDSCQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSDILIRNVTARSLVSAGISIG 145
Query: 307 SEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYG 366
SEMSGG+ +V E++ ++ GVRIKTA GRG Y++ I R +T ++ + DY
Sbjct: 146 SEMSGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVRAGIVIKVDYN 205
Query: 367 SHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKE 426
H D G+D A P +T I+++ + V + G P I ++++ ++ K K
Sbjct: 206 EHADDGYDRTAFPDITSISFKGIHGQGVRVPVRAHGSDVIPIKDISFQDMSVGISYKKKH 265
Query: 427 LQWNCTNIQGITSR-VTPQACELL 449
+ + C+ ++G R V P+ CE L
Sbjct: 266 I-FQCSYLEGRVIRPVFPKPCENL 288
>gi|346223842|ref|ZP_08844984.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 532
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/390 (31%), Positives = 200/390 (51%), Gaps = 38/390 (9%)
Query: 59 LTDFGGV---GDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLY 115
+ DFG D T A + AI S+ GG ++VP G+WLTG +L S+ L+
Sbjct: 68 IRDFGAKEMDADKTNKCTDAIHKAIDAASE---SGGGTVLVPAGQWLTGPVHLKSNINLH 124
Query: 116 IHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQ 175
+ K+A L S+D++++ LP +P G + +S LI+ N+T+V +TG T+ GQ
Sbjct: 125 LEKNASLFFSEDKTDY--LPVVPQRYEGVEVY--NYSPLIYAANVTNVSITG-KGTLEGQ 179
Query: 176 GEPW--WIKY------------RKKQFNV------TRPYLIEVMFSDNVQISNLTLIDSP 215
G+ W W R+K F RP + S N+ + +TL +SP
Sbjct: 180 GQHWLEWGTVQPRANAAKVPLSRRKNFGKGAGKEGMRPNFVVFWKSKNILVEGITLNESP 239
Query: 216 SWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWD 275
WN+H VYS N +++ +T+ + +DS N DG+ DS + +E N + +GDD + +KSG++
Sbjct: 240 MWNIHLVYSQNAIVRDITVNS-LDSQNGDGVVVDSSHDVLLEYNQLHTGDDAIVLKSGFN 298
Query: 276 EYGIKVGMPTQHLIIRRLIC--ISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIK 333
E G+ + +PT++++IR + S + GSE SGGI++V D G+R K
Sbjct: 299 EDGLAINIPTENVVIRNYYAYKVRTGSGGVVFGSETSGGIRNVYVHDAVFEKCDRGIRFK 358
Query: 334 TAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADN 393
TA GRG ++ I+VR ++MK + Y ++ G P P V I+ R++ D
Sbjct: 359 TARGRGNVIENIFVRDISMKDITYEAININT--AYAGAGIGPS--PMVRNIDIRNIRIDG 414
Query: 394 VTQSAKLDGIRNDPFTGICISNVTIKLTEK 423
V + L+G+ I + N+ + +EK
Sbjct: 415 VPDAIVLNGLPEKWIENIRMDNIIVTNSEK 444
>gi|257440293|ref|ZP_05616048.1| polygalacturonase [Faecalibacterium prausnitzii A2-165]
gi|257197327|gb|EEU95611.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii A2-165]
Length = 518
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/383 (32%), Positives = 185/383 (48%), Gaps = 32/383 (8%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
+G V DG T NT A+S K G + VP G++ T S + S TLY+ K A+
Sbjct: 87 YGLVADGTTDNTGKLQAALSTCPK-----GGTVYVPAGRYRTSSLFMKSCTTLYLEKGAV 141
Query: 122 LLASQDESEWPLLPPLPSYGRGRDE---------PGGRFSSLIFGTNLTDVVVTG-GNAT 171
LL D + +P+LP + DE P F+ L+ T + DVVVTG G
Sbjct: 142 LLGDNDRTHYPILPGVIPSENEVDEYYLTGWEGNPLDSFAGLLNITQVHDVVVTGEGTLD 201
Query: 172 INGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQG 231
+ Q WWI + K+ RP + + S+NV + +T+ +S SW +HP++ ++ +
Sbjct: 202 CDAQNGDWWINQKVKRI-AWRPRAVAAVDSENVCLHGITVQNSYSWTIHPIFVKHLDLLN 260
Query: 232 LTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIR 291
I P ++PNTDGI+P+SC RI I GDDC+A+K+ G+K+ +H +IR
Sbjct: 261 FNINNPYNAPNTDGIDPESCEYIRIIGANIHVGDDCIAMKASKVFLGMKLKKSCEHTVIR 320
Query: 292 RLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG--AYVKEIYVRR 349
+ + I +GSEMSGG+KD+ +T G+R+KT GRG A + + R
Sbjct: 321 NCL-LDKGHGGIVIGSEMSGGVKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVIDGLVFRN 379
Query: 350 MTMKTMKYVFWMTGDYGSHPDPGFDP-----------KALPTVTGINYRDMVA-DNVTQS 397
+ M+ +K F + Y PD G P + P + + D+VA D
Sbjct: 380 VEMRGVKTPFVINMFYFCDPD-GHSPYVQCRDAMPVDEYTPKLGSLTMEDIVATDAQFAG 438
Query: 398 AKLDGIRNDPFTGICISNVTIKL 420
DG+ P I + NVTI
Sbjct: 439 CYFDGLPEQPIERISMKNVTITF 461
>gi|357139199|ref|XP_003571172.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 266
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 111/166 (66%), Gaps = 5/166 (3%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+T+FGGVGDG+T NT A A+ Y G L++P G WL+GSFNLTSH TL++ +
Sbjct: 105 ITEFGGVGDGRTLNTWALRKAV-----YRIQCGTTLLLPVGTWLSGSFNLTSHMTLFLAR 159
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A+L A+QD W L+ PLPSYGRGR+ PG R++S I G L DVV+TG I+GQG+
Sbjct: 160 GAVLKATQDTRSWLLMEPLPSYGRGRELPGARYASFIHGNGLRDVVITGDKGVIDGQGDV 219
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYS 224
WW +R++ TRP L+E + S + ISN+ L +S WN+HPVYS
Sbjct: 220 WWNMWRRRTLQHTRPNLVEFVHSSGIHISNVVLKNSLFWNIHPVYS 265
>gi|224537997|ref|ZP_03678536.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520403|gb|EEF89508.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
Length = 452
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 194/410 (47%), Gaps = 56/410 (13%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R + G DGKT NTK N+ I L+ A+GG L P G +LTGS + SH
Sbjct: 22 RAERVDMLKAGAKVDGKTLNTKLINSTIDRLN---ANGGGTLFFPAGTYLTGSIRMKSHI 78
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL + A LL S ++ LP + G F LI+ + ++ + G T+
Sbjct: 79 TLELEAGATLLFSDSFDDY--LPFVEVRHEGVMMKS--FQPLIYAVDAENITIKG-EGTL 133
Query: 173 NGQGEPWWIKYRKKQFNVT----------------------------------------R 192
+GQG+ WW+++ + ++ R
Sbjct: 134 DGQGKKWWMEFFRVMIDLRDNGMRNVNKYQTMWDQANDTTAIYAETNKDYIGTLQRRFFR 193
Query: 193 PYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCT 252
P I+ + +V+I + +++SP W V+P + NV ++G+TI + SPNTDGINP+SC
Sbjct: 194 PPFIQPVRCKDVKIEGVKIVNSPFWTVNPEFCENVKVKGVTIHN-VPSPNTDGINPESCR 252
Query: 253 NTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGG 312
N I D +I GDDC+ +KSG D G ++G+P +++ I I +S + +GSEMSGG
Sbjct: 253 NVHISDCHISVGDDCITIKSGRDAQGRRLGVPCENITITNCIMLS-GHGGVVIGSEMSGG 311
Query: 313 IKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDP 371
++ V + T G+R+K+ GRG V++I V + M+ +K + Y P
Sbjct: 312 VRKVTISNCIFDGTDRGIRLKSTRGRGGVVEDIRVSNIVMRNIKQEAVVLNLKYSGMPA- 370
Query: 372 GFDPKA--LPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
+PK+ P I+ M +V K+ G+ P + I + ++ ++
Sbjct: 371 --EPKSERTPLFRNIHISGMTVTDVKTPVKIVGLEEAPISEIVLRDIHVQ 418
>gi|373849855|ref|ZP_09592656.1| Polygalacturonase [Opitutaceae bacterium TAV5]
gi|372476020|gb|EHP36029.1| Polygalacturonase [Opitutaceae bacterium TAV5]
Length = 916
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 197/404 (48%), Gaps = 53/404 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ D G G NT+A AI ++ GG +++VP G WLTG+ + S L++
Sbjct: 22 IRDHGAHPGGALLNTRAIADAIQACAR---QGGGRVVVPSGIWLTGAIHFRSRIDLHLEA 78
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGG----RFSSLIFGTNLTDVVVTGGNATING 174
A L SQ+ ++ LPP+ S + GG +S ++ D+ +TG +NG
Sbjct: 79 GAELRFSQNPDDY--LPPVLS------QRGGVMIYNYSPFLYAHRCEDISITGA-GLLNG 129
Query: 175 QGEPWWIKYRKKQFNVT---------------------------RPYLIEVMFSDNVQIS 207
QG+ WW ++ Q ++ RP + + V I
Sbjct: 130 QGQSWW-PWKHSQPGMSSIQGPDNFAALRTPLEERVFGTREAGVRPVFCQPIECKRVLIE 188
Query: 208 NLTLIDSPSWNVHPVYSSNVLIQGLTIRAPID--SPNTDGINPDSCTNTRIEDNYIVSGD 265
+T DSPSW + PV+ +++ ++ TI P S NTDGI+PD+C N IE + +GD
Sbjct: 189 GVTFRDSPSWTLQPVWCADLTLRHSTILNPPSPFSHNTDGIDPDACRNVLIEHCVVDTGD 248
Query: 266 DCVAVKSGWDEYGIKVGMPTQHLIIRRLIC-ISPDSAAIALGSEMSGGIKDVRAEDITAI 324
D + +K+G DE + G+P ++++IR C I I +GSEMS G++++ A D T
Sbjct: 249 DAICIKAGRDEDAWEAGIPCENILIRH--CEIRSGHGGITIGSEMSAGVRNLHAHDCTCD 306
Query: 325 NTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDPGFDPKAL---PT 380
T + +RIKT GRG ++K+I + +T + +++ +T YG + DPK L P
Sbjct: 307 GTDTAIRIKTKPGRGGFIKDILIENITARRIRHAAVELTFHYGDTLEKPPDPKNLKHVPA 366
Query: 381 VTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKP 424
V I R++ D+ ++ L G+ P + + N+ I + P
Sbjct: 367 VENILIRNVRCDSAREALHLRGLPGHPLKNVTLQNLEIHAFQNP 410
>gi|448360766|ref|ZP_21549393.1| glycoside hydrolase family 28 [Natrialba asiatica DSM 12278]
gi|445652552|gb|ELZ05438.1| glycoside hydrolase family 28 [Natrialba asiatica DSM 12278]
Length = 522
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 126/390 (32%), Positives = 187/390 (47%), Gaps = 38/390 (9%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ +FG SNT+A TA L + A GG + VPPG ++TG + TL++
Sbjct: 11 IREFGAQSGSDDSNTEAIQTA---LDECAGTGGT-VSVPPGTYVTGPLRVGDRTTLHLEA 66
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A L D + P + S G D+ G L+ G D V G TI+G GE
Sbjct: 67 GATLRFVGD---YEAFPTVKSRWEGWDQVGFHPCLLVDGA---DTVSITGRGTIDGNGEY 120
Query: 179 WWIKYRK---------------------KQFNVT----RPYLIEVMFSDNVQISNLTLID 213
WW Y + KQ +V+ RP L++V ++NV +S +TL +
Sbjct: 121 WWQFYGEPESTLPDGLQDRLAEFEAQNDKQDDVSSFTHRPPLLQVFDAENVTVSGVTLRN 180
Query: 214 SPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSG 273
SP WN H VYS NV I + I P +PN DGI+ DS RI D YI +GDD + +KSG
Sbjct: 181 SPFWNTHVVYSENVTITDVNIENPAGAPNGDGIDIDSSRYVRISDAYINAGDDAICIKSG 240
Query: 274 WDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIK 333
D G +VG P + + + + +GSEMSG ++DV + T +T G+RIK
Sbjct: 241 KDAEGREVGEPASQITVTNC-TVEAGHGGVVIGSEMSGDVRDVTVTNCTFTDTDRGIRIK 299
Query: 334 TAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDP--KALPTVTGINYRDMVA 391
T GRG V+++ ++ M+ + F + G Y + D +P + P V +++ ++ A
Sbjct: 300 TQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPLDSDPEPIDEGTPLVRNVSFSNITA 359
Query: 392 DNVTQSAKLDGIRNDPFTGICISNVTIKLT 421
NV + G+ F GI +V I T
Sbjct: 360 RNVETAGFFAGLPERYFEGISFRDVRIDAT 389
>gi|23099543|ref|NP_693009.1| hypothetical protein OB2088 [Oceanobacillus iheyensis HTE831]
gi|22777773|dbj|BAC14044.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 495
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 173/326 (53%), Gaps = 42/326 (12%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+T+FG GD T NT++ ++AI + A GG L +P G +LTG +L S+ T+YI
Sbjct: 5 ITEFGAKGDSNTDNTESISSAIK---RCADSGGGTLYIPAGTYLTGPISLISNLTIYIES 61
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A L+ D S + PP+ + G + G FS L++G LT+V + G+ I+GQGE
Sbjct: 62 GAKLVFIDDFSAY---PPVKTRWSGYECYG--FSPLLYGNGLTNVSII-GSGCIDGQGEA 115
Query: 179 WW----IKYRKKQFN----------------------------VTRPYLIEVMFSDNVQI 206
WW + + ++++ RP L+++ D+V +
Sbjct: 116 WWEVNHLLRKGEEYDHPQTKEIAELNKSITEPKNTNLVEWPSQFLRPPLLQMYDCDSVTL 175
Query: 207 SNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDD 266
+TL +SP WN H VY NV I + + P D+PN DG++ DSC+N R+ + + GDD
Sbjct: 176 DGITLENSPFWNTHFVYCDNVTIHNVKFKNPWDTPNGDGLDLDSCSNVRVSNCHFDVGDD 235
Query: 267 CVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINT 326
C+A KSG +E G +V PT+++ + + I +GSE SGGI+++ + I T
Sbjct: 236 CLAFKSGINEDGRRVARPTENVAVTNCT-MKNGHGGIVMGSENSGGIRNIAVSNCVFIGT 294
Query: 327 QSGVRIKTAVGRGAYVKEIYVRRMTM 352
G+R+KT RG+Y+++I + + M
Sbjct: 295 DRGIRLKTNRARGSYIRDILIDNIYM 320
>gi|359414685|ref|ZP_09207150.1| Polygalacturonase [Clostridium sp. DL-VIII]
gi|357173569|gb|EHJ01744.1| Polygalacturonase [Clostridium sp. DL-VIII]
Length = 487
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 111/307 (36%), Positives = 168/307 (54%), Gaps = 22/307 (7%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG GDG +T A +I+ A ++IVP G++L L S+ T+ + +
Sbjct: 58 VKDFGAKGDGLELDTAAVQASIA-----ACPLHGRIIVPKGRYLLTPIFLKSNITIELEE 112
Query: 119 DALLLASQDESEWPLLPPLPS--------YGRGRDEPGGRFSSLIFGTNLTDVVVTGGNA 170
A+LL +QD +++P+LP L G +P F+SLI G N+ +V + G N
Sbjct: 113 GAVLLGAQDRNKYPILPGLLKGSSKEEYFLGSWEGDPDDCFASLITGINVENVNIIG-NG 171
Query: 171 TINGQG--EPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
I+G + WW + +KK+ RP +I ++ N+ + ++T+ +SPSW +HP+ S ++
Sbjct: 172 IIDGNASIDNWWFEAKKKRI-AWRPRMIFLVGCKNILVESVTVKNSPSWTIHPLMSEDLK 230
Query: 229 IQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHL 288
L I P DSPNTDG++P+SC N I GDDC+A+KSG MP+QH+
Sbjct: 231 FINLYIENPKDSPNTDGLDPESCKNVHILGVNFSVGDDCIAIKSGKIFISKIKTMPSQHI 290
Query: 289 IIRRLIC-ISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG--AYVKEI 345
IR C ++ A+ LGSEMS GI ++ E+ T G+RIKT GRG A + EI
Sbjct: 291 YIRN--CNMNFGHGAVVLGSEMSSGINNIYVENCLFNETDRGIRIKTRRGRGDTAIIDEI 348
Query: 346 YVRRMTM 352
Y R + M
Sbjct: 349 YARNIKM 355
>gi|347530390|ref|YP_004837153.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
gi|345500538|gb|AEN95221.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
Length = 382
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 179/362 (49%), Gaps = 36/362 (9%)
Query: 91 GAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGR 150
G +IVP G+W +G+ +L S+ LY+ + ++ S ++ LPP+ + R
Sbjct: 26 GGTVIVPRGEWKSGAIHLKSNVKLYLEEGCVIHFSSCMEDY--LPPV--FTRWEGVECYN 81
Query: 151 FSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVT------------------- 191
+S LI+ + +V + G ++G G WW ++K Q N
Sbjct: 82 YSPLIYAADCENVTICG-TGVLDGAGSAWW-HWKKLQQNAADHLIRAESQEIPVEERIFA 139
Query: 192 ------RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
RP I+ + +V + + T+ D P W +HPVY +V+++G+T+ PNTDG
Sbjct: 140 TRKDALRPSFIQFINCKHVTLEDFTIEDGPQWTIHPVYCEDVVVRGVTVNT--KGPNTDG 197
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
NPDSC IED +GDDC+A+ SG +E G +VG P + + ++ I AA+A+
Sbjct: 198 CNPDSCRKVLIEDCTFETGDDCIAINSGMNEDGWRVGRPCEQIEVKNCRFIG-GHAAVAI 256
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTM-KYVFWMTGD 364
GS MSGGI D+ D A T+ G+RIK+ GRG YVK + V RM M + K ++ +
Sbjct: 257 GSGMSGGICDIWIHDCVARGTERGIRIKSMRGRGGYVKRVNVERMQMDEIEKEAIEVSMN 316
Query: 365 YGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKP 424
YGS KA P + + + + ++ L G+ P I + +V+I +
Sbjct: 317 YGSSTAVPVSQKA-PEFSELRFAHIRGNHAAIGVSLCGLPESPLREITLEDVSIAAEDPL 375
Query: 425 KE 426
+E
Sbjct: 376 RE 377
>gi|326799707|ref|YP_004317526.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326550471|gb|ADZ78856.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 517
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 124/388 (31%), Positives = 184/388 (47%), Gaps = 40/388 (10%)
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDA 120
DFG D T A AI+ K + GG + PPG +LTG +L S+ TL+I A
Sbjct: 27 DFGAKNDSSALATTAIKEAIA---KASQAGGGTIYFPPGTYLTGPIHLKSNITLFIEAGA 83
Query: 121 LLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW 180
L S + + LP +PS G FS I+ ++ +TG T+NG G+ WW
Sbjct: 84 ELCFSDNFDHY--LPMVPSRWEGTMVT--NFSPFIYAYEAENIRITG-RGTLNGNGKKWW 138
Query: 181 I----------------KYRKKQFNVT-------------RPYLIEVMFSDNVQISNLTL 211
++ K NV RP I+ M+ NV+I +T+
Sbjct: 139 AYSEVHVKNSPESKWQKEFHKLNKNVLHPDLPGWVERGFLRPPFIQPMYCKNVRIDGITI 198
Query: 212 IDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVK 271
+SP W V+P + NV I G+TI P SPNTDGINP+SC+N I + +I GDDC+ +K
Sbjct: 199 KNSPFWTVNPEFCDNVTIDGVTINNP-PSPNTDGINPESCSNVHISNCHISVGDDCITIK 257
Query: 272 SGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVR 331
SG D G K P ++ I +S + +GSEMSG +K + + T G+R
Sbjct: 258 SGKDRSGRKEARPAENYTITNCTMLS-GHGGVVIGSEMSGDVKKIVISNCIFDGTDRGIR 316
Query: 332 IKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVA 391
IKTA GRG V++I V + MK +K + + D + P + I+ ++ A
Sbjct: 317 IKTARGRGGVVEDIQVSNIVMKNIKQQAIVLDMQYAKTDREPVSERTPRFSNIHLSNITA 376
Query: 392 DNVTQSAKLDGIRNDPFTGICISNVTIK 419
Q+ L+G+ P + SN+ ++
Sbjct: 377 QG-EQAGYLNGLEEMPIENVSFSNMVME 403
>gi|448349773|ref|ZP_21538602.1| glycoside hydrolase family 28 [Natrialba taiwanensis DSM 12281]
gi|445639084|gb|ELY92202.1| glycoside hydrolase family 28 [Natrialba taiwanensis DSM 12281]
Length = 522
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 187/390 (47%), Gaps = 38/390 (9%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ +FG SNT+A TA L + A GG + VPPG ++TG + TL++
Sbjct: 11 IREFGAQSGSDDSNTEAIQTA---LDECAGTGGT-VSVPPGTYVTGPLRVGDRTTLHLEA 66
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A L D + P + S G D+ G L+ GT D V G I+G GE
Sbjct: 67 GATLRFVGD---YEAFPTVQSRWEGWDQIGFHPCLLVDGT---DTVSITGQGAIDGNGEY 120
Query: 179 WWIKYRK---------------------KQFNVT----RPYLIEVMFSDNVQISNLTLID 213
WW Y + KQ +V+ RP L+++ ++NV +S +TL +
Sbjct: 121 WWQFYGEPEPMLPDGLQDRLAEFEAQNDKQDDVSSFTHRPPLLQIFDAENVTVSGVTLRN 180
Query: 214 SPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSG 273
SP WN H VYS NV I + I P +PN DGI+ DS RI D YI +GDD + +KSG
Sbjct: 181 SPFWNTHVVYSENVTITDVNIENPAGAPNGDGIDIDSSRYVRISDAYINAGDDAICIKSG 240
Query: 274 WDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIK 333
D G +VG P + + + + +GSEMSG ++DV + T +T G+RIK
Sbjct: 241 KDAEGREVGEPASQITVANC-TVEAGHGGVVIGSEMSGDVRDVTVSNCTFTDTDRGIRIK 299
Query: 334 TAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDP--KALPTVTGINYRDMVA 391
T GRG V+++ ++ M+ + F + G Y + D +P + P V +++ ++ A
Sbjct: 300 TQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPLDSDPEPTGEGTPLVRNVSFSNITA 359
Query: 392 DNVTQSAKLDGIRNDPFTGICISNVTIKLT 421
NV + G+ F GI +V I T
Sbjct: 360 RNVETAGFFAGLPERYFEGISFRDVRIDAT 389
>gi|295103112|emb|CBL00656.1| Endopolygalacturonase [Faecalibacterium prausnitzii SL3/3]
Length = 518
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/391 (31%), Positives = 192/391 (49%), Gaps = 32/391 (8%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
+G V DG+T NT A+S K G + VP G++ T S + S+ TLY+ K A+
Sbjct: 87 YGLVADGETDNTVRLQAALSTCPK-----GGTVYVPAGRYRTASLFMKSNTTLYLEKGAV 141
Query: 122 LLASQDESEWPLLPP-LPS-------YGRG-RDEPGGRFSSLIFGTNLTDVVVTG-GNAT 171
LL D + +P+LP LPS Y G P F+ L+ T + DVVVTG G
Sbjct: 142 LLGDNDRTHYPILPGVLPSENEVDEYYLTGWEGNPLDSFAGLLNITQVHDVVVTGEGTLD 201
Query: 172 INGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQG 231
+ Q WW+ + K+ RP + + S+NV + +T+ +S SW +HP++ ++ +
Sbjct: 202 CDAQNGDWWVNPKVKRI-AWRPRAVAAVDSENVCLHGITVQNSFSWTIHPIFVKHLDLLN 260
Query: 232 LTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIR 291
I P ++PNTDGI+P+SC RI I GDDC+A+K+ G+K+ +H +IR
Sbjct: 261 FNINNPYNAPNTDGIDPESCEYIRIIGMNIHVGDDCIAMKASKVFLGMKLKRSCEHTVIR 320
Query: 292 RLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG--AYVKEIYVRR 349
+ + I +GSEMSGG+KD+ +T G+R+KT GRG A + + R
Sbjct: 321 NCL-LDKGHGGIVIGSEMSGGVKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVIDGLVFRN 379
Query: 350 MTMKTMKYVFWMTGDYGSHPDPGFDP-----------KALPTVTGINYRDMVA-DNVTQS 397
+ M+ +K F + Y PD G P + P + + ++VA D
Sbjct: 380 VEMRGVKAPFVINMFYFCDPD-GHGPYVQCREAMPVDEYTPKLGSLTMENIVATDAQFAG 438
Query: 398 AKLDGIRNDPFTGICISNVTIKLTEKPKELQ 428
DG+ P + + +V+I KE Q
Sbjct: 439 CYFDGLPEQPIERVTMRDVSITFDPNAKEGQ 469
>gi|448394041|ref|ZP_21567906.1| glycoside hydrolase family 28 [Haloterrigena salina JCM 13891]
gi|445662631|gb|ELZ15395.1| glycoside hydrolase family 28 [Haloterrigena salina JCM 13891]
Length = 518
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/390 (31%), Positives = 186/390 (47%), Gaps = 38/390 (9%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ ++G GD +T+A A+ A+ G + VP G ++TG + TLY+
Sbjct: 11 IREYGATGDSDEPDTEAIQAALDE----CAESGGTVYVPSGTYVTGPLRVGDRTTLYLDA 66
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A L Q ++ P + S G ++ G F + + +V +TG TI+G GE
Sbjct: 67 GATL---QFVGDYEAFPTVQSRWEGWNQYG--FHPCLLVDDAENVSITG-RGTIDGGGEY 120
Query: 179 WWIKY---------------------RKKQFNVT----RPYLIEVMFSDNVQISNLTLID 213
WW Y +KQ +V+ RP L ++ S+NV +S +TL +
Sbjct: 121 WWQFYDAPESEIPDGLQERLAEFEEKNEKQDDVSSFTHRPPLFQIYGSENVSVSGVTLEN 180
Query: 214 SPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSG 273
SP WN H VYS NV I + I P D+PN DGI+ DS RI D YI +GDD + +KSG
Sbjct: 181 SPFWNTHVVYSENVTITDVNIANPADAPNGDGIDIDSSRYVRISDTYINAGDDAICIKSG 240
Query: 274 WDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIK 333
+ G +VG P + + + + +GSEMSG ++DV + T +T GVRIK
Sbjct: 241 KNAEGREVGEPASQITVTNC-TVEAGHGGVVIGSEMSGDVRDVTVTNCTFTDTDRGVRIK 299
Query: 334 TAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDP--KALPTVTGINYRDMVA 391
TA RG V+++ + M+ + F + G Y D +P + P V +++ ++ A
Sbjct: 300 TARNRGGVVEDLRFDNIVMRRIACPFTINGYYFMPLDSDSEPVDEGTPMVRNVSFTNITA 359
Query: 392 DNVTQSAKLDGIRNDPFTGICISNVTIKLT 421
V + G+ F GI S+V I T
Sbjct: 360 RQVETAGFFAGLPEQYFEGISFSDVQIDAT 389
>gi|160945608|ref|ZP_02092834.1| hypothetical protein FAEPRAM212_03137 [Faecalibacterium prausnitzii
M21/2]
gi|158443339|gb|EDP20344.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii M21/2]
Length = 518
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/391 (31%), Positives = 192/391 (49%), Gaps = 32/391 (8%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
+G V DG+T NT A+S K G + VP G++ T S + S+ TLY+ K A+
Sbjct: 87 YGLVADGETDNTVRLQAALSTCPK-----GGTVYVPAGRYRTASLFMKSNTTLYLEKGAV 141
Query: 122 LLASQDESEWPLLPP-LPS-------YGRG-RDEPGGRFSSLIFGTNLTDVVVTG-GNAT 171
LL D + +P+LP LPS Y G P F+ L+ T + DVVVTG G
Sbjct: 142 LLGDNDRTHYPILPGVLPSENEVDEYYLTGWEGNPLDSFAGLLNITQVHDVVVTGEGTLD 201
Query: 172 INGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQG 231
+ + WW+ + K+ RP + + S+NV + +T+ +S SW +HP++ ++ +
Sbjct: 202 CDAENGDWWVNPKVKRI-AWRPRAVAAVDSENVCLHGITVQNSYSWTIHPIFVKHLDLLN 260
Query: 232 LTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIR 291
I P ++PNTDGI+P+SC RI I GDDC+A+K+ G+K+ +H +IR
Sbjct: 261 FNINNPYNAPNTDGIDPESCEYIRIIGMNIHVGDDCIAMKASKVFLGMKLKRSCEHTVIR 320
Query: 292 RLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG--AYVKEIYVRR 349
+ + I +GSEMSGG+KD+ +T G+R+KT GRG A + + R
Sbjct: 321 NCL-LDKGHGGIVIGSEMSGGVKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVIDGLVFRN 379
Query: 350 MTMKTMKYVFWMTGDYGSHPDPGFDP-----------KALPTVTGINYRDMVA-DNVTQS 397
+ M+ +K F + Y PD G P + P + + ++VA D
Sbjct: 380 VEMRGVKAPFVINMFYFCDPD-GHGPYVQCREPLPVDEYTPKLGSLTMENIVATDAQFAG 438
Query: 398 AKLDGIRNDPFTGICISNVTIKLTEKPKELQ 428
DG+ P + + +V+I KE Q
Sbjct: 439 CYFDGLPEQPIERVTMRDVSITFDPNAKEGQ 469
>gi|313114438|ref|ZP_07799963.1| polygalacturonase [Faecalibacterium cf. prausnitzii KLE1255]
gi|310623236|gb|EFQ06666.1| polygalacturonase [Faecalibacterium cf. prausnitzii KLE1255]
Length = 510
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/383 (31%), Positives = 186/383 (48%), Gaps = 32/383 (8%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
+G V DG T NT A+S K G + VP G++ T S L S+ TLY+ K A+
Sbjct: 79 YGLVADGTTDNTLKLQAALSTCPK-----GGTVYVPAGRYRTCSLFLKSNTTLYLEKGAV 133
Query: 122 LLASQDESEWPLLPPLPSYGRGRDE---------PGGRFSSLIFGTNLTDVVVTG-GNAT 171
LL D + +P+LP + DE P F+ L+ T + DVVVTG G
Sbjct: 134 LLGDNDRTHYPILPGVIPSENEVDEYYLTGWEGNPLDSFAGLLNITQVHDVVVTGEGTLD 193
Query: 172 INGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQG 231
+ + WW+ + K+ RP + + S+N+ + +T+ +S SW +HP++ ++ +
Sbjct: 194 CDAENGDWWVTPKIKRI-AWRPRAVAAVDSENICLHGITVQNSYSWTIHPIFVKHLDLLN 252
Query: 232 LTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIR 291
I P ++PNTDGI+P+SC RI I GDDC+A+K+ G+K+ +H +IR
Sbjct: 253 FNINNPYNAPNTDGIDPESCEYIRIIGVNIHVGDDCIAMKASKVFLGMKLKKSCEHTVIR 312
Query: 292 RLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG--AYVKEIYVRR 349
+ + I +GSEMSGG+KD+ +T G+R+KT GRG A + + R
Sbjct: 313 NCL-LDKGHGGIVIGSEMSGGVKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVIDGLVFRN 371
Query: 350 MTMKTMKYVFWMTGDYGSHPDPGFDP-----------KALPTVTGINYRDMVA-DNVTQS 397
+ M+ +K F + Y PD G P + P + + D+VA D
Sbjct: 372 VEMRGVKAPFVINMFYFCDPD-GHGPYVQCRDAMPVDEYTPKLGSLTMEDIVATDAQFAG 430
Query: 398 AKLDGIRNDPFTGICISNVTIKL 420
DG+ P + + NVTI
Sbjct: 431 CYFDGLPEQPIERVSMKNVTITF 453
>gi|359477236|ref|XP_003631950.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 275
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 120/198 (60%), Gaps = 1/198 (0%)
Query: 249 DSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSE 308
DS +T IED I G D +A+KSGWDEYGI G PT ++ IRR+ S +++A GSE
Sbjct: 51 DSSDSTCIEDCSIAMGHDAIALKSGWDEYGIAYGRPTTNVHIRRVNLQSSSGSSLAFGSE 110
Query: 309 MSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSH 368
MSGGI +V E + N+ SG+ +T GRG Y++EI + + M+ + F TG GSH
Sbjct: 111 MSGGISNVCVEQVHLYNSFSGIEFRTTKGRGGYIQEIIISDVAMENIHTAFSATGQIGSH 170
Query: 369 PDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQ 428
PD FDP ALP + I ++++ N+T + GI+ PFT IC+SN+++ T P +
Sbjct: 171 PDDHFDPNALPVLDHITLQNVIGTNITIAGSFTGIQESPFTSICLSNISLS-TTPPASIS 229
Query: 429 WNCTNIQGITSRVTPQAC 446
W C+N+ G + V P+ C
Sbjct: 230 WVCSNVSGFSQWVFPEPC 247
>gi|308069843|ref|YP_003871448.1| polygalacturonase [Paenibacillus polymyxa E681]
gi|305859122|gb|ADM70910.1| Polygalacturonase (Pectinase) (PGL) [Paenibacillus polymyxa E681]
Length = 453
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 123/377 (32%), Positives = 192/377 (50%), Gaps = 25/377 (6%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ D+G V DG T T A +AI S GG + VP G +LTG+ L S+ L++
Sbjct: 6 IVDYGAVQDGTTLATGAIASAIEAASNA---GGGTVFVPSGTYLTGAIFLKSNIELHVSP 62
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A L S + +++P++ R +S I+G NL ++ VTG + T++G G+P
Sbjct: 63 GATLSFSTELADYPVVE-----SRWEGVQREVHASCIYGENLENISVTG-SGTLDGNGQP 116
Query: 179 WWIKYRK--KQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRA 236
WW K+R ++ RP LI V I ++ L +SPSW V+P+ NV I L+I
Sbjct: 117 WWQKHRNHPEELQYPRPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNLSILN 176
Query: 237 PIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICI 296
P DSPNTDGINP+SC+N RI + I GDDC+A+K+G ++ ++ P +++ I +
Sbjct: 177 PADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTEDTQERI--PCENITITNCTMV 234
Query: 297 SPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK 356
A+ LGSEMSG I++V + T G+R+K+ GRG +++I V + M+ +
Sbjct: 235 H-GHGAVVLGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGTIEDIRVSNIVMEDVI 293
Query: 357 YVFWMTGDYGSHP----------DPGFDPKALPTVTGINYRDMVADNVTQSAK-LDGIRN 405
F + Y P +P P I++ D+ A V +A L G+
Sbjct: 294 CPFILNLYYFCGPRGKDKYVWDKNPYPITDETPCFRRIHFSDITARQVHAAAGFLYGLAE 353
Query: 406 DPFTGICISNVTIKLTE 422
I SN+ I + +
Sbjct: 354 QYIAEITFSNIDISMAK 370
>gi|284172853|ref|YP_003406235.1| glycoside hydrolase family 28 [Haloterrigena turkmenica DSM 5511]
gi|284017613|gb|ADB63562.1| glycoside hydrolase family 28 [Haloterrigena turkmenica DSM 5511]
Length = 541
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 120/390 (30%), Positives = 187/390 (47%), Gaps = 38/390 (9%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ ++G GD +T+A TA+ A+ G + VP G ++TG + TL++
Sbjct: 36 IREYGATGDSDALDTEAIQTALDEC----AESGGTVYVPSGTYVTGPLRVGDQTTLHLDA 91
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A L Q ++ P + S G ++ G F + + +V +TG TI+G GE
Sbjct: 92 GATL---QFVGDYEAFPTVQSRWEGWNQYG--FHPCLLVDDAENVSITG-RGTIDGGGEY 145
Query: 179 WWIKY---------------------RKKQFNVT----RPYLIEVMFSDNVQISNLTLID 213
WW Y +KQ +V+ RP L ++ S+NV +S +TL +
Sbjct: 146 WWQFYDAPESEIPDGLQERLAEFEEKNEKQDDVSSFTHRPPLFQISESENVSVSGVTLEN 205
Query: 214 SPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSG 273
SP WN H VYS NV I + I P D+PN DGI+ DS RI D YI +GDD + +KSG
Sbjct: 206 SPFWNTHVVYSENVTITDVNIANPADAPNGDGIDIDSSRYVRISDTYINAGDDAICIKSG 265
Query: 274 WDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIK 333
+ G +VG P + + + + +GSEMSG ++DV + T +T GVRIK
Sbjct: 266 KNAEGREVGEPASQITVTNC-TVEAGHGGVVIGSEMSGDVRDVTVSNCTFTDTDRGVRIK 324
Query: 334 TAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDP--KALPTVTGINYRDMVA 391
TA RG V+++ + M+ + F + G Y D +P + P V +++ ++ A
Sbjct: 325 TARDRGGVVEDLRFDNIVMRRIACPFTINGYYFMPLDSDSEPVDEGTPMVRNVSFTNITA 384
Query: 392 DNVTQSAKLDGIRNDPFTGICISNVTIKLT 421
V + G+ F GI ++V I T
Sbjct: 385 RQVETAGFFAGLPEQYFEGISFNDVQIDAT 414
>gi|310642874|ref|YP_003947632.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|309247824|gb|ADO57391.1| Galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|392303699|emb|CCI70062.1| Polygalacturonase PG [Paenibacillus polymyxa M1]
Length = 453
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 120/377 (31%), Positives = 192/377 (50%), Gaps = 25/377 (6%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ D+G V DG T+A AI S GG + VP G +LTG+ L S+ L++
Sbjct: 6 IVDYGAVQDGTKMATEAIAAAIEAASNA---GGGTVFVPAGTYLTGAIFLKSNIELHVSP 62
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A+L S + +++P++ R +S I+G NL ++ +TG + T++G G+P
Sbjct: 63 GAILSFSTELADYPVVE-----SRWEGVQREVHASCIYGENLENISITG-SGTLDGNGQP 116
Query: 179 WWIKYRK--KQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRA 236
WW K+R ++ RP LI V I ++ L +SPSW V+P+ NV I L+I
Sbjct: 117 WWEKHRNHPEELQYPRPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNLSILN 176
Query: 237 PIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICI 296
P DSPNTDGINP+SC+N RI + I GDDC+A+K+G ++ ++ P +++ I +
Sbjct: 177 PADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTEDTQERI--PCENITITNCTMV 234
Query: 297 SPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK 356
A+ LGSEMSG I++V + T G+R+K+ GRG +++I + + M+ +
Sbjct: 235 H-GHGAVVLGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGIIEDIRISNIVMEEVI 293
Query: 357 YVFWMTGDYGSHP----------DPGFDPKALPTVTGINYRDMVADNVTQSAK-LDGIRN 405
F + Y P +P P I++ D+ A V +A L G+
Sbjct: 294 CPFILNLYYFCGPRGKDKYVWDKNPYPITDETPCFRRIHFSDITARQVHAAAGFLYGLAE 353
Query: 406 DPFTGICISNVTIKLTE 422
I SN+ I + +
Sbjct: 354 QYIAEITFSNIDISMAK 370
>gi|332299163|ref|YP_004441085.1| Polygalacturonase [Treponema brennaborense DSM 12168]
gi|332182266|gb|AEE17954.1| Polygalacturonase [Treponema brennaborense DSM 12168]
Length = 449
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 167/327 (51%), Gaps = 43/327 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L +FG DG +N AF A+S L + GG L VP G W TG L + TL++ +
Sbjct: 6 LKNFGAKADGIYNNAAAFAEAVSVLHEA---GGGTLTVPAGIWKTGPIRLCAKMTLHLAE 62
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A+L D +P P Y R + ++ + V VTG I+G G+
Sbjct: 63 GAVLRFIPDPELYP-----PVYTRWEGVECYAMQACLYCADSDSVTVTG-KGVIDGSGDT 116
Query: 179 WW-IKYRK------------------------------KQFNVTRPYLIEVMFSDNVQIS 207
WW ++++K ++ RP L++ NV++
Sbjct: 117 WWDLRWQKADQGGPKSPIECKLAALNPGYRSQPGGGGGREVQFLRPALVQFYNCTNVRLE 176
Query: 208 NLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDC 267
+TL +SP W VHPVY N+L++G+TI+ P D+PNTDGI+ DSCTN +I D + GDD
Sbjct: 177 QVTLENSPFWTVHPVYCDNLLVRGITIQNPKDAPNTDGIDIDSCTNVQIVDCEVSVGDDG 236
Query: 268 VAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRAEDITAINT 326
+A+KSG E GI+V PT+++ +R C D+ + +GSE + GI+ V AE+ T
Sbjct: 237 IALKSGSGEDGIRVNRPTRNVTVRG--CTVRDAHGGMVIGSETAAGIRHVLAENCRFPGT 294
Query: 327 QSGVRIKTAVGRGAYVKEIYVRRMTMK 353
GVRIK+ GRG + ++ +R + M+
Sbjct: 295 DRGVRIKSRRGRGGEIYDVKLRNLVME 321
>gi|374324810|ref|YP_005077939.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
gi|357203819|gb|AET61716.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
Length = 476
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 116/348 (33%), Positives = 181/348 (52%), Gaps = 26/348 (7%)
Query: 90 GGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGG 149
GG + VP G +LTG+ L S+ L++ A+L S D ++P++ R E
Sbjct: 57 GGGTVFVPSGTYLTGAIFLKSNIELHLSPGAILSFSTDLVDYPVV-------ESRWEGVQ 109
Query: 150 R--FSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRK--KQFNVTRPYLIEVMFSDNVQ 205
R +S I+G NL ++ VTG + T++G G+PWW K+RK ++ RP LI V
Sbjct: 110 REVHASCIYGQNLENISVTG-SGTLDGNGQPWWEKHRKHPEELQYPRPKLISFDRCQRVT 168
Query: 206 ISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGD 265
I ++ L +SPSW V+P+ NV I ++I P DSPNTDGINP+SC+N RI + I GD
Sbjct: 169 IKDVMLKNSPSWTVNPIACYNVTIDNVSILNPTDSPNTDGINPESCSNVRISNCNIDVGD 228
Query: 266 DCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN 325
DC+A+K+G ++ ++ P +++ I + A+ LGSEMSG I++V +
Sbjct: 229 DCIAIKAGTEDTQERI--PCENITITNCTMVH-GHGAVVLGSEMSGDIRNVTISNCVFKQ 285
Query: 326 TQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHP----------DPGFDP 375
T G+R+K+ GRG V++I V + M+ + F + Y P +P
Sbjct: 286 TDRGIRLKSRRGRGGIVEDIRVSNIVMEDVICPFILNLYYFCGPRGKDKYVWDKNPYPIT 345
Query: 376 KALPTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNVTIKLTE 422
P I++ D+ A V +A L G+ I SN+ I + +
Sbjct: 346 DETPCFRRIHFSDITARQVHAAAGFLYGLAEQYIAEITFSNIDISMAK 393
>gi|414873754|tpg|DAA52311.1| TPA: hypothetical protein ZEAMMB73_541408 [Zea mays]
Length = 253
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 131/214 (61%), Gaps = 5/214 (2%)
Query: 247 NPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALG 306
+PDS TN I Y+ +G D + +KSGWDEYGI P+ ++ I + + + IA G
Sbjct: 9 HPDSSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFG 68
Query: 307 SEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYG 366
SEMSGGI +VRA + +N+ G+RIKTA GRG YV+ +Y+ ++M + +TG+YG
Sbjct: 69 SEMSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYG 128
Query: 367 SHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKE 426
HPD +D ALP ++ I +D+V N+ + L+GI+ D F+ IC+SNV++ +
Sbjct: 129 EHPDDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSLSVQSAHP- 187
Query: 427 LQWNCTNIQGITSRVTPQACELLPK--KEPTDCF 458
WNC+ I+G ++ V P++CE L ++ + C+
Sbjct: 188 --WNCSLIEGYSNSVIPESCEQLRSNCRQTSICY 219
>gi|379724921|ref|YP_005317052.1| hypothetical protein PM3016_7335 [Paenibacillus mucilaginosus 3016]
gi|378573593|gb|AFC33903.1| hypothetical protein PM3016_7335 [Paenibacillus mucilaginosus 3016]
Length = 506
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 191/412 (46%), Gaps = 54/412 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+T +G GDG NT A AI S A GG + VP G ++TG L SH TL +
Sbjct: 6 ITSYGAQGDGLQDNTAAIAAAIEACS---AGGGGTVYVPAGDYVTGPIVLRSHITLQLEA 62
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
++L + + PP+ + G + G +S LI+G L V + G I GQG+
Sbjct: 63 GSVLRFT---PRFDAYPPVQTRWSGYEMWG--YSPLIYGNGLKQVAIKG-EGVIEGQGQA 116
Query: 179 WWIKYR---------------------------------KKQFNVTRPYLIEVMFSDNVQ 205
WW YR + Q RP L+++M + V
Sbjct: 117 WWDAYRVIRAGGAAPASEHLPKLVELNRVLTDTVKSNIVEWQTQFLRPPLLQLMHCEEVV 176
Query: 206 ISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGD 265
+ +TL +SP WN H VY +V ++G+ + P +PN DG++ DSC+N RI D + GD
Sbjct: 177 LEGITLQNSPFWNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVDSCSNVRISDCHFDVGD 236
Query: 266 DCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN 325
DC+ +KSG DE G +VG PT+++ + + + LGSE +GGI++V + I
Sbjct: 237 DCLCLKSGIDEDGRRVGRPTENVAVTNCTMLH-GHGGVVLGSETAGGIRNVTISNCIFIG 295
Query: 326 TQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPG----FDPKALPTV 381
T G+RIKT RG V+ + + + M+ + + Y D P+A+P
Sbjct: 296 TDRGIRIKTNRARGGGVENVRISNIYMEDVLCPLAINAFYKHGIDESNPLLTSPEAVPVT 355
Query: 382 TG------INYRDMVADNVTQSAK-LDGIRNDPFTGICISNVTIKLTEKPKE 426
G I D+ A N +A + G+ P + + +VT ++T P E
Sbjct: 356 EGTPVIRHIQISDVTAKNARAAAGFIYGLPEMPIEDVALRHVTFEMTLDPAE 407
>gi|409099480|ref|ZP_11219504.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 530
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 188/392 (47%), Gaps = 44/392 (11%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+T +G D T A AI SK GG + P GK+LTG+ +L S+ T++I
Sbjct: 33 VTKYGAKNDSSKLATVAIKKAIDAASKA---GGGTVYFPAGKYLTGAIHLKSNITIFIDA 89
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A L S + ++ LP + S G D FS L + ++ + G I+G G+
Sbjct: 90 GAELHFSDNFDDY--LPMVESRYEGVDVKS--FSPLFYAYKAENISIIG-RGLIDGHGKK 144
Query: 179 WW--------------IKYRKKQFN---------------VTRPYLIEVMFSDNVQISNL 209
WW +Y + N RP I+ MF NV I +
Sbjct: 145 WWDFVEGYKEGQARSKWQYEFDKLNKDIVLPDDPKQMKRGFLRPPFIQTMFCKNVLIDGI 204
Query: 210 TLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVA 269
T+ +SP W V+P +S NV I +TI P SPNTDGINP+SC N I D +I GDDC+
Sbjct: 205 TIRNSPFWTVNPEFSENVKIHAVTINNP-HSPNTDGINPESCKNVHISDCHISVGDDCIT 263
Query: 270 VKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSG 329
+KSG DE G ++ +P ++ +I +S + +GSEMSG ++ + + T G
Sbjct: 264 IKSGKDEPGRRMAIPAENYVITNCTMLS-GHGGVVIGSEMSGDVRKITISNCVFDGTDRG 322
Query: 330 VRIKTAVGRGAYVKEIYVRRMTMKTMK-YVFWMTGDYG-SHPDPGFDPKALPTVTGINYR 387
+RIKTA GRG V+EI V + MK +K + Y ++ P D P I++
Sbjct: 323 IRIKTARGRGGIVEEIRVSNIIMKDIKQQAIVLDMQYAKTNVQPVSD--RTPKFRNIHFS 380
Query: 388 DMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
++ V Q+A L+G+ P I +++ ++
Sbjct: 381 NITGQ-VNQAAYLNGLEEMPIENITFNDINME 411
>gi|225165583|ref|ZP_03727398.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
gi|224800169|gb|EEG18584.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
Length = 421
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/334 (35%), Positives = 178/334 (53%), Gaps = 37/334 (11%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L + G G S T AF AI L AA GG L VP G+WLTG L SH L++
Sbjct: 21 LLEHGAQEGGIQSCTTAFANAIDTL---AAQGGGTLTVPAGRWLTGPICLRSHIRLHLET 77
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A ++ S++ +++ PP+ ++ G F L++ + T + +TG T +GQG+
Sbjct: 78 GAHVVFSREHADYQ--PPVLAHRAGCWVM--NFHPLLYARDATHIAITG-RGTFDGQGDA 132
Query: 179 WWIKYRKKQFNV------------------------TRPYLIEVMFSDNVQISNLTLIDS 214
WW +++K + V RP ++E + +V I N+TL DS
Sbjct: 133 WW-EWKKNEDGVRRLIDMVARRVPIAERIFGTVADCVRPNMLEFINCRDVLIENVTLRDS 191
Query: 215 PSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGW 274
P++ VHPV NV ++GL+I + PN DGI+P+ C N IED + +GDDC+ +KSG
Sbjct: 192 PAYLVHPVGCENVTLRGLSILG--NGPNNDGIDPEYCRNVLIEDCLVDTGDDCICLKSGR 249
Query: 275 DEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKT 334
D+ G PT+++I+RR+ I LGSE+S GI++V ED T+ G+RIK+
Sbjct: 250 DQDGWAENRPTENVIVRRIR-TRRGHGGIVLGSELSSGIRNVLVEDCDFSGTERGIRIKS 308
Query: 335 AVGRGAYVKEIYVRRMTMK-TMKYVFWMTGDYGS 367
A GRG +V+ I++R + M + + DYGS
Sbjct: 309 APGRGGFVENIHMRNIRMSDIIDEAIIIHMDYGS 342
>gi|160886115|ref|ZP_02067118.1| hypothetical protein BACOVA_04122 [Bacteroides ovatus ATCC 8483]
gi|156108928|gb|EDO10673.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 459
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/416 (29%), Positives = 195/416 (46%), Gaps = 59/416 (14%)
Query: 63 GGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALL 122
G +GKT NTK N+ I L++ GG L P G +LTGS +L S+ TL + A L
Sbjct: 39 GAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNITLELEAGATL 95
Query: 123 LASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIK 182
L S + ++ LP + G F LI+ + ++ + G T++GQG+ WW++
Sbjct: 96 LFSDNFDDY--LPFVEVRHEGVMMKS--FQPLIYAVDAENITIKG-EGTLDGQGKKWWME 150
Query: 183 YRKKQFNVT----------------------------------------RPYLIEVMFSD 202
+ + ++ RP I+ +
Sbjct: 151 FFRVMIDLKDNGMRDVNKYQSMWDAANDTTAIYAETNKDYVNTLQRRFFRPPFIQPVRCK 210
Query: 203 NVQISNLTLIDSPSWNVHPVYSSNVLIQGLTI-RAPIDSPNTDGINPDSCTNTRIEDNYI 261
V+I + +I+SP W V+P + NV I+G+TI AP SPNTDG+NP+SC N I D +I
Sbjct: 211 KVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNPESCRNVHISDCHI 268
Query: 262 VSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDI 321
GDDC+ +KSG D ++G+P +++ I +S + +GSEMSG ++ V +
Sbjct: 269 SVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS-GHGGVVIGSEMSGSVRKVTISNC 327
Query: 322 TAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDPGFDPKA--L 378
T G+RIK+ GRG V++I V + M +K + Y P +PK+
Sbjct: 328 VFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP---VEPKSERT 384
Query: 379 PTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNI 434
P ++ M NV K+ G+ P + I + ++ I+ K K + NC I
Sbjct: 385 PIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ-EGKQKCIFENCERI 439
>gi|280977865|gb|ACZ98650.1| polygalacturonase [Cellulosilyticum ruminicola]
Length = 518
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/338 (34%), Positives = 173/338 (51%), Gaps = 22/338 (6%)
Query: 48 QALNCRKHSAVLT--DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGS 105
Q + SA+L DFG GDG++ + A AI+ K GA+++ P G + T
Sbjct: 70 QEVTTSSESALLNIRDFGAKGDGESMDAAAIQAAIAAAPK-----GARIVFPAGTYRTTP 124
Query: 106 FNLTSHFTLYIHKDALLLASQDESEWPLLPP----------LPSYGRGRDEPGGRFSSLI 155
L SH T+ + + A LL + +P+LP G E ++SL+
Sbjct: 125 IFLKSHITIELMEGATLLGHHERDAYPILPGKLTKEDDNENFYFLGTWEGEIAECYASLL 184
Query: 156 FGTNLTDVVVTG-GNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDS 214
G + DV + G G NGQ WWI + K+ RP + ++ ++ + +T+ +S
Sbjct: 185 TGIGVEDVRIIGEGTLDGNGQNGDWWINCKVKR-EAWRPRSLYLLECHDILVEGITIKNS 243
Query: 215 PSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGW 274
PSW VHP+ SS + LT+ P DSPNTDGI+P+SC I GDDC+A+KSG
Sbjct: 244 PSWTVHPIRSSKLRFINLTLNNPKDSPNTDGIDPESCNGVEILGVKFSLGDDCIAIKSGK 303
Query: 275 DEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKT 334
+K P++++IIR + + A+ LGSEMSGG+K+V E +T G+RIKT
Sbjct: 304 ISIPLKERRPSENIIIRNCL-MQYGHGAVVLGSEMSGGVKNVFVERCFFEDTDRGLRIKT 362
Query: 335 AVGRG--AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPD 370
GRG A + +IYV+ + MK + F + Y PD
Sbjct: 363 RRGRGNTAIIDQIYVKNIQMKGVLTPFTLNAFYFCDPD 400
>gi|355673331|ref|ZP_09058928.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
gi|354814797|gb|EHE99396.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
Length = 532
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/410 (30%), Positives = 197/410 (48%), Gaps = 43/410 (10%)
Query: 46 EFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGS 105
EF LN R DFG GDG +T +A+ K ++++VP G + S
Sbjct: 89 EFVTLNVR-------DFGAKGDGIQDDTLFIQSAVMACPK-----DSRVLVPAGTYRIVS 136
Query: 106 FNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDE---------PGGRFSSLIF 156
L + + + K A+L A D S +P+L + G+DE P FS+++
Sbjct: 137 LFLKDNVKIELEKGAVLSADTDRSRFPVLKGMIKSFDGKDEYNLGTWEGDPLPMFSAVVT 196
Query: 157 GTNLTDVVVTG-----GNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTL 211
G N+ + V+ G GNA G GE W K+ RP ++ + +V I LTL
Sbjct: 197 GINIENAVIYGRGVIEGNA---GFGEENWWHDPKRMKTAFRPRMVFLERCKHVVIQGLTL 253
Query: 212 IDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVK 271
+SPSWN+HP +S ++ L + +P DSPNTDG++P+SC + I GDDC+AVK
Sbjct: 254 RNSPSWNIHPYFSEHLKFLDLRVLSPKDSPNTDGLDPESCRDVEITGICFSVGDDCIAVK 313
Query: 272 SGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVR 331
SG G P++ +++ R C+ ++ +GSEM+GG+K++ D +T G+R
Sbjct: 314 SGKIYMGTTYKRPSEDIVVSRC-CMRDGHGSVTIGSEMAGGVKNLTVRDCVFRHTDRGLR 372
Query: 332 IKTAVGRG--AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFD----PKALPT----- 380
IKT GRG A V I R+ M +K F + Y PD + + LP
Sbjct: 373 IKTRRGRGKNAVVDGILFERIHMDQVKTPFVINSFYYCDPDGNSEYVRTKERLPVDDRTP 432
Query: 381 -VTGINYRDMVADNV-TQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQ 428
+ + +RD+ A N +A L G+ + + V+I T + ++ Q
Sbjct: 433 WIKHLTFRDIEAVNCHVAAAYLYGLPERKIGKVEMERVSISFTPEAQKGQ 482
>gi|262408002|ref|ZP_06084550.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|293369111|ref|ZP_06615706.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336416263|ref|ZP_08596599.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345511524|ref|ZP_08791064.1| polygalacturonase [Bacteroides sp. D1]
gi|423286902|ref|ZP_17265753.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
gi|262354810|gb|EEZ03902.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|292635823|gb|EFF54320.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335938994|gb|EGN00873.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345454069|gb|EEO49839.2| polygalacturonase [Bacteroides sp. D1]
gi|392674440|gb|EIY67888.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
Length = 450
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/416 (29%), Positives = 195/416 (46%), Gaps = 59/416 (14%)
Query: 63 GGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALL 122
G +GKT NTK N+ I L++ GG L P G +LTGS +L S+ TL + A L
Sbjct: 30 GAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNITLELEAGATL 86
Query: 123 LASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIK 182
L S + ++ LP + G F LI+ + ++ + G T++GQG+ WW++
Sbjct: 87 LFSDNFDDY--LPFVEVRHEGVMMKS--FQPLIYAVDAENITIKG-EGTLDGQGKKWWME 141
Query: 183 YRKKQFNVT----------------------------------------RPYLIEVMFSD 202
+ + ++ RP I+ +
Sbjct: 142 FFRVMIDLKDNGMRDVNKYQSMWDAANDTTAIYAETNKDYVNTLQRRFFRPPFIQPVRCK 201
Query: 203 NVQISNLTLIDSPSWNVHPVYSSNVLIQGLTI-RAPIDSPNTDGINPDSCTNTRIEDNYI 261
V+I + +I+SP W V+P + NV I+G+TI AP SPNTDG+NP+SC N I D +I
Sbjct: 202 KVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNPESCRNVHISDCHI 259
Query: 262 VSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDI 321
GDDC+ +KSG D ++G+P +++ I +S + +GSEMSG ++ V +
Sbjct: 260 SVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS-GHGGVVIGSEMSGSVRKVTISNC 318
Query: 322 TAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDPGFDPKA--L 378
T G+RIK+ GRG V++I V + M +K + Y P +PK+
Sbjct: 319 VFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP---VEPKSERT 375
Query: 379 PTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNI 434
P ++ M NV K+ G+ P + I + ++ I+ K K + NC I
Sbjct: 376 PIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ-EGKQKCIFENCERI 430
>gi|399024363|ref|ZP_10726403.1| endopolygalacturonase [Chryseobacterium sp. CF314]
gi|398080600|gb|EJL71406.1| endopolygalacturonase [Chryseobacterium sp. CF314]
Length = 467
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 129/459 (28%), Positives = 220/459 (47%), Gaps = 65/459 (14%)
Query: 16 VIKILSTLLTLGLLSPQVAECRPTKNSYTIEFQAL--NCRKHSAVLTDFGGVGDGKTSNT 73
+ ++ ++ G P + +P + T++ Q + N RK ++TDFG +GDGKT NT
Sbjct: 8 LFALIISISVSGQYKPWTSSEQPLQEINTLKKQIVKPNFRKKDYLVTDFGAIGDGKTKNT 67
Query: 74 KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPL 133
AF AI K +GG +++VP G +LTG+ L S+ L+I + A +L SQD +++P+
Sbjct: 68 GAFKKAIE---KCNVEGGGRVVVPKGIFLTGAIYLKSNVDLHISEGATILFSQDSNDYPI 124
Query: 134 LPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG-GNATINGQGEPWWI-----KY---- 183
+ + R +SSLI+ ++ +TG G N + WW KY
Sbjct: 125 V-----FTRWEGMECMNYSSLIYAHEEENIAITGKGTLDGNSDNDHWWFWCGAKKYGWNE 179
Query: 184 -----------------------RKKQFN---VTRPYLIEVMFSDNVQISNLTLIDSPSW 217
R++ F RP ++ S N ++++ + +SP W
Sbjct: 180 SRPGRQNPARAKLHEYMAQKKDPRERIFGDGYYLRPNFVQPYKSKNFYMADVLVKNSPMW 239
Query: 218 NVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEY 277
N++PV NVLI+ + + + PN DG +P++C N I+D+Y +GDDC+A+KSG DE
Sbjct: 240 NLNPVLCENVLIERVKVIS--HGPNNDGFDPEACKNVWIKDSYFDTGDDCIAIKSGRDED 297
Query: 278 GIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRA--EDITAINTQSGVRIKT 334
G +G P ++ II C D + +GSE++GG K++ A + + N + +RIKT
Sbjct: 298 GRGIGKPAENHIIEN--CEMKDGHGGVVIGSEIAGGAKNIYAIGNVMDSKNLERALRIKT 355
Query: 335 AVGRGAYVKEIYVRRMTMKTMKYV---FWMTGDYGSHPDPGFDPKALPTVTGINYRDMVA 391
+ RG ++ ++ + K F M + PG +PT+ I ++
Sbjct: 356 SSNRGGIIENVFFYNTKVGAYKEAAVRFNM-----HYEKPG---NFIPTIRNIWVENLTV 407
Query: 392 DNVTQSAKL-DGIRNDPFTGICISNVTIKLTEKPKELQW 429
+ + A L D + P T + N I E P ++ +
Sbjct: 408 EKGGKYAILSDAYESSPVTDFTMVNAKINNVEIPYKVDF 446
>gi|326790331|ref|YP_004308152.1| polygalacturonase [Clostridium lentocellum DSM 5427]
gi|326541095|gb|ADZ82954.1| Polygalacturonase [Clostridium lentocellum DSM 5427]
Length = 515
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 168/323 (52%), Gaps = 18/323 (5%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG VGDG T +T A AI K G+++++P G + L SH TL + +
Sbjct: 82 VKDFGAVGDGVTMDTAAIQAAIMAAPK-----GSRVVIPAGTYKILPLFLKSHMTLELLE 136
Query: 119 DALLLASQDESEWPLLP--------PLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG-GN 169
A LLA D ++P+LP + + ++S+I G + DV + G G
Sbjct: 137 GATLLAHTDRKDYPILPGKMILEDGSIAYLASWEGDMADCYASIITGIGVRDVRIIGQGT 196
Query: 170 ATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
NGQ WW+ + K+ RP + ++ ++V + +T+ +SPSW VHPV S+ +
Sbjct: 197 IDGNGQNADWWVDCKVKR-GAWRPRSLYLVDCEDVVVEGITIKNSPSWTVHPVRSTKLRF 255
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
LT+ P DSPNTDGI+P+SC I GDDC+A+KSG + + P++++I
Sbjct: 256 INLTLNNPKDSPNTDGIDPESCNGVEIIGVKFSLGDDCIAIKSGKISVPVDMRRPSENII 315
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG--AYVKEIYV 347
IR + + + LGSEMSGGIK V E NT G+RIKT GRG A + EIY+
Sbjct: 316 IRNCL-MEYGHGGVVLGSEMSGGIKHVYVERCFFRNTDRGLRIKTRRGRGNTAVIDEIYI 374
Query: 348 RRMTMKTMKYVFWMTGDYGSHPD 370
+ + M + F + Y PD
Sbjct: 375 KNIKMDGVLTPFTLNCFYFCDPD 397
>gi|337750378|ref|YP_004644540.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
KNP414]
gi|336301567|gb|AEI44670.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus KNP414]
Length = 530
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 197/440 (44%), Gaps = 75/440 (17%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+TD+G VGDG T NT+AF+ AI+ S+ GG ++++P G WLTG +L S L+
Sbjct: 30 VTDYGAVGDGVTDNTEAFHKAIAACSQA---GGGRVVIPAGVWLTGPLSLASRLDLHAQA 86
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
AL+L S+ ++P++ + + +P R S + G L V +TG +G G+
Sbjct: 87 GALVLFSRRFEDYPMI-----FSQYEGQPSIRCQSPLDGEGLEHVAITGA-GVFDGGGDA 140
Query: 179 W------------WIKY------------------------------------RKKQFNV 190
W W K K +
Sbjct: 141 WRPVKDWKMTEKHWAKLIASGGVVDEAAGMWWPSEAAMNGPAKVAQLKREGSTDPKDYEA 200
Query: 191 TRPYLIEVMFS----DNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGI 246
R YL + S V + T +SP+WN+HP +V ++G+T+R P N DG+
Sbjct: 201 ARDYLRPNLLSLRRCKYVLLEGATFQNSPAWNLHPWACEHVTLRGVTVRNPWYGQNGDGL 260
Query: 247 NPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALG 306
+ DSC +ED GDD + +KSG DE G ++G+P + ++IR + +G
Sbjct: 261 DLDSCRYGLVEDCSFDVGDDAICIKSGKDEAGRELGIPCEDILIRNCR-VYHGHGGFVIG 319
Query: 307 SEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM-----KTMKYVFWM 361
SEMSGG++ +R ED T + T G+R K+ GRG V++I + R+ M + + + +
Sbjct: 320 SEMSGGVRRLRVEDCTFMGTDIGLRFKSTRGRGGLVEDIEIERIRMNSIVGEAISFHLFY 379
Query: 362 TGDYGSH-PDPGFDPKAL--PTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
G GS P ++ P GI RD+ + ++G+ P G+ + N T
Sbjct: 380 EGKEGSGVAGENIVPVSVETPIFRGITIRDVQCAGAETALLINGLPEMPLDGLVVENFTA 439
Query: 419 KLTEKPKELQWNCTNIQGIT 438
CTN Q +T
Sbjct: 440 SAKRGVV-----CTNAQNLT 454
>gi|404484304|ref|ZP_11019517.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
gi|404342621|gb|EJZ68992.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
Length = 526
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 184/384 (47%), Gaps = 28/384 (7%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG GDG +++ AI+ K DG + +P GK+L L S+ L+I K
Sbjct: 85 VKDFGAAGDGVKTDSVCIQAAINACPK---DG--TVYIPKGKYLCTPVFLKSNIDLWIDK 139
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDE---------PGGRFSSLIFGTNLTDVVVTGGN 169
DA+L+ +D ++P+LP + DE P F++LI G ++ +V++ G
Sbjct: 140 DAILIGEKDRKKYPILPGMTQSSDENDEYNIGSWEGNPLDCFAALITGISVENVLIFGEG 199
Query: 170 ATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
G W K KK+ RP + + N+ + L +++SPSW VHP YS N+L
Sbjct: 200 ILDGNAGMLDWWKDAKKKNIAWRPNTVFLHNCKNIAMQGLCIMNSPSWTVHPYYSDNLLF 259
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
TI P +SPNTDG++P+SC N I I GDDCVA+KSG +K P ++++
Sbjct: 260 LNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCVAIKSGKYYMALKHYKPAKNIV 319
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG--AYVKEIYV 347
IR I ++ +GSE++ G+ DV E T G+RIKT GRG + + I
Sbjct: 320 IRNSI-FRKGHGSVTIGSEVAAGVYDVSVEKCIFEGTDRGLRIKTRRGRGEKSVLDNICF 378
Query: 348 RRMTMKTMKYVFWMTGDYGSHPDPGFD----------PKALPTVTGINYRDMVADNVTQ- 396
+ MK + F Y PD D + P + I RD+ +NV
Sbjct: 379 ENIIMKDVCMPFTANMFYFCDPDGHSDYVQNQDKMEVNEKTPKIGKIAARDIRCENVKNI 438
Query: 397 SAKLDGIRNDPFTGICISNVTIKL 420
A L G+ P I + N+T+
Sbjct: 439 FACLYGLPEMPVEEIVLENITLNF 462
>gi|167521696|ref|XP_001745186.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776144|gb|EDQ89764.1| predicted protein [Monosiga brevicollis MX1]
Length = 945
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 137/437 (31%), Positives = 208/437 (47%), Gaps = 66/437 (15%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVP--PGKWLTGSFNLTSHFTLYI 116
++D+G D K+ +T A TAI S+ +GG L+ P G +LTGS L S+ +
Sbjct: 523 VSDYGARDDNKSISTHAIQTAIEACSR-CPEGGHVLLRPLDKGIYLTGSLFLKSNIIFEV 581
Query: 117 HKDALLLASQDES--EWPLLPPLPSYGRGRDE-PGGRFSSLIFGTNLT------------ 161
LL + ++S WP + Y R R + L GT LT
Sbjct: 582 TAGVRLLGTANKSTVHWPQI-----YRRNAGVLELSRAALLNAGTCLTFHSTNQTGDQCA 636
Query: 162 ------DVVVTGGNATINGQGEPWWI--KYRKKQFNVTRPYLIEVMFSDNVQISNLTLID 213
++ +TG TI+G G W Y F RP LI M+ D + +S+LTL D
Sbjct: 637 EWSRYSNITITGA-GTIDGNGFSGWYLPPYLNGSFT-NRPMLIAPMWVDGLYLSDLTLTD 694
Query: 214 SPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSG 273
W V P + NV I L R PNTDG++PDSC N +E YI +GDDC+A+KSG
Sbjct: 695 PAFWTVAPAFCKNVHIHDL--RIITSGPNTDGVDPDSCQNVLVERCYISTGDDCIAIKSG 752
Query: 274 WDEYGIKVGMPTQHLIIRRL-----------------IC---ISPDSA---AIALGSEMS 310
+ + MPT ++ IR + +C I D I++GSEMS
Sbjct: 753 RGPQALAINMPTANVTIRHVPQRVGRDYDATAIGSYALCRGQIRTDCTTGHGISIGSEMS 812
Query: 311 GGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPD 370
GGI DV +++T T +GVR+KT +GRG V+ + R M + ++ + DY S
Sbjct: 813 GGIYDVLFDNLTLSGTTNGVRVKTCMGRGGSVRNVTYRNMVIDSVDTAVLINQDYNSVTC 872
Query: 371 PGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWN 430
G ALP + I ++++A+NV + +L+ ++++ G+ NVT+ + +
Sbjct: 873 VG---DALPNFSDILVQNVIANNVKMAFELECLQDNSCAGLRFENVTVTAFQNASK---- 925
Query: 431 CTNIQ-GITSRVTPQAC 446
C ++Q I V+P C
Sbjct: 926 CAHVQPEIGPNVSPVPC 942
>gi|182416092|ref|YP_001821158.1| glycoside hydrolase [Opitutus terrae PB90-1]
gi|177843306|gb|ACB77558.1| glycoside hydrolase family 28 [Opitutus terrae PB90-1]
Length = 543
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 192/387 (49%), Gaps = 36/387 (9%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ D G V GKT NT ++ A GG +++VP G+WLTG +L S+ L++ +
Sbjct: 56 IRDHGAVPGGKTKNTA---AFAQAIAACAEAGGGRVLVPAGRWLTGPIHLRSNIELHLAQ 112
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
DA ++ S ++ LP + G + +S I+ + T+V +TG +NG +
Sbjct: 113 DAEVIFSDRFEDY--LPVVLVRVGGIEL--YNYSPFIYARDCTNVAITG-PGRLNGNSQR 167
Query: 179 WW---IKYRKKQFNVT------------------RPYLIEVMFSDNVQISNLTLIDSPSW 217
WW K K+ F + RP + NV + T+ P+W
Sbjct: 168 WWAWKTKETKRIFRLAPDGVPVEQRIFGTPEAAIRPNFVVFFNCRNVLMEGFTIGGGPNW 227
Query: 218 NVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEY 277
+HPVYS N++I+ + + + PN DGI+PDSC N IE +GDDCV +KSG++E
Sbjct: 228 TIHPVYSENIIIRRVHVLT--EGPNNDGIDPDSCRNVLIEHCVFDTGDDCVVLKSGYNED 285
Query: 278 GIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAV 336
G +V PT+++++R C S + +GSEMSG +++V D T VRIK+
Sbjct: 286 GWRVARPTENVVMR--WCSSARGHGGLVVGSEMSGDVRNVYMHDCDFAGTDRAVRIKSRR 343
Query: 337 GRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVT 395
GRG V+ I+ + ++ M+ V + DYG+ + F K P I+ R + AD
Sbjct: 344 GRGGVVENIWAENLRVRDMQQEVVILNMDYGADRNQAFTEKP-PLFRNIHVRRVTADGAP 402
Query: 396 QSAKLDGIRNDPFTGICISNVTIKLTE 422
+ ++ G+ + P + ++TI+ T
Sbjct: 403 AAIRIAGLADSPIEHVTFEDLTIQSTR 429
>gi|375309358|ref|ZP_09774639.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. Aloe-11]
gi|375078667|gb|EHS56894.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. Aloe-11]
Length = 504
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 211/437 (48%), Gaps = 45/437 (10%)
Query: 3 FCLKSR--NNILHPHVIKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLT 60
FC K+R + I HV K L + L Q E K QA N +
Sbjct: 13 FCRKARLDSTIRLLHVAK-LERIHVLYFPHSQNTEIGENK------MQAYN-------IV 58
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDA 120
D+G DGKT T+A AI S GG +++P G +LTG+ S+ L++ A
Sbjct: 59 DYGAPQDGKTPATEAIANAIEAASN---AGGGTVVIPSGTYLTGAIFFKSNIELHLSPGA 115
Query: 121 LLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW 180
+L S + +++P++ R +S I+G NL ++ VTG + + G G+PWW
Sbjct: 116 ILSFSTNPADYPVVE-----SRWEGVQREVHASCIYGQNLENISVTG-SGILEGNGQPWW 169
Query: 181 IKYRK--KQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
K+R ++ RP LI V I ++ L +SPSW ++P+ NV I L+I P
Sbjct: 170 EKHRNHPEELQYPRPKLISFDRCQRVTIKDIMLKNSPSWTINPIACYNVTIDNLSILNPA 229
Query: 239 DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISP 298
DSPNTDGINP+SC+N RI + I GDDC+A+K+G ++ ++ +++ I +
Sbjct: 230 DSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTEDTQERIA--CENITITNCTMVH- 286
Query: 299 DSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKT---- 354
+ LGSEMSG I++V + T G+R+K+ GRG +++I V + M+
Sbjct: 287 GHGGVVLGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGIIEDIRVSNIVMEEVICP 346
Query: 355 -MKYVFWMTGDYG-------SHPDPGFDPKALPTVTGINYRDMVADNVTQSAK-LDGIRN 405
+ +++ G G +P P D P I++ D+ A V +A L G+
Sbjct: 347 FILNLYYFCGPRGKDKYVWDKNPYPVTD--ETPCFRRIHFADITARQVHAAAGFLYGLAE 404
Query: 406 DPFTGICISNVTIKLTE 422
I SN+ I + +
Sbjct: 405 QYIAEITFSNIDISMAK 421
>gi|299145498|ref|ZP_07038566.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|298515989|gb|EFI39870.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
Length = 450
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 198/426 (46%), Gaps = 59/426 (13%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R + G +GKT NTK N+ I L++ GG L P G +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 76
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL + A LL S + ++ LP + G F LI+ + ++ + G T+
Sbjct: 77 TLELEAGATLLFSDNFDDY--LPFVEVRHEGVMMKS--FQPLIYAVDTENITIKG-EGTL 131
Query: 173 NGQGEPWWIKYRKKQFNVT----------------------------------------R 192
+GQG+ WW+++ + ++ R
Sbjct: 132 DGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNKDYVNTLQRRFFR 191
Query: 193 PYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTI-RAPIDSPNTDGINPDSC 251
P I+ + V+I + +I+SP W V+P + +NV I+G+TI AP SPNTDG+NP+SC
Sbjct: 192 PPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCNNVTIKGITIDNAP--SPNTDGVNPESC 249
Query: 252 TNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSG 311
N I D +I GDDC+ +KSG D ++G+P +++ I +S + +GSEMSG
Sbjct: 250 RNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS-GHGGVVIGSEMSG 308
Query: 312 GIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPD 370
++ V + T G+RIK+ GRG V++I V + M +K + Y P
Sbjct: 309 SVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMPA 368
Query: 371 PGFDPKA--LPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQ 428
+PK+ P ++ M NV K+ G+ P + I + ++ I+ K K +
Sbjct: 369 ---EPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ-GGKQKCIF 424
Query: 429 WNCTNI 434
NC I
Sbjct: 425 ENCERI 430
>gi|379723469|ref|YP_005315600.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
3016]
gi|386726203|ref|YP_006192529.1| glycoside hydrolase [Paenibacillus mucilaginosus K02]
gi|378572141|gb|AFC32451.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus 3016]
gi|384093328|gb|AFH64764.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
K02]
Length = 530
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 196/440 (44%), Gaps = 75/440 (17%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+TD+G VGDG T NT+AF+ AI+ S+ GG ++++P G WLTG +L S L+
Sbjct: 30 VTDYGAVGDGVTDNTEAFHKAIAACSQA---GGGRVVIPAGVWLTGPLSLASRLDLHAQA 86
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
AL+L S+ ++P++ + + +P R S + G L V +TG +G G+
Sbjct: 87 GALVLFSRRFEDYPMI-----FSQYEGQPSIRCQSPLDGEGLEHVAITGA-GVFDGGGDA 140
Query: 179 W------------WIKY------------------------------------RKKQFNV 190
W W K K +
Sbjct: 141 WRPVKDWKMTEKHWAKLIASGGVVDEDAGMWWPSEAAMNGPAKVAQLKREGSTDPKDYEA 200
Query: 191 TRPYLIEVMFS----DNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGI 246
R YL + S V + T +SP+WN+HP +V ++G+T+R P N DG+
Sbjct: 201 ARDYLRPNLLSLRRCKYVLLEGATFQNSPAWNLHPWACEHVTLRGVTVRNPWYGQNGDGL 260
Query: 247 NPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALG 306
+ DSC +ED GDD + +KSG DE G +G+P + ++IR + +G
Sbjct: 261 DLDSCRYGLVEDCSFDVGDDAICIKSGKDEAGRALGIPCEDILIRNCR-VYHGHGGFVIG 319
Query: 307 SEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM-----KTMKYVFWM 361
SEMSGG++ +R ED T + T G+R K+ GRG V++I + R+ M + + + +
Sbjct: 320 SEMSGGVRRLRVEDCTFMGTDIGLRFKSTRGRGGLVEDIEIERIRMNSIVGEAISFHLFY 379
Query: 362 TGDYGSH-PDPGFDPKAL--PTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
G GS P ++ P GI RD+ + ++G+ P G+ + N T
Sbjct: 380 EGKEGSGVAGENIVPVSVETPIFRGITIRDVQCAGAETALLINGLPEMPLDGLVVENFTA 439
Query: 419 KLTEKPKELQWNCTNIQGIT 438
CTN Q +T
Sbjct: 440 SAKRGGV-----CTNAQNLT 454
>gi|260642326|ref|ZP_05415427.2| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260622463|gb|EEX45334.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 456
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 197/426 (46%), Gaps = 59/426 (13%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R + G +GKT NTK N+ I L++ GG L P G +LTGS +L S+
Sbjct: 30 RAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 86
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL + A LL S + ++ LP + G F LI+ + ++ + G T+
Sbjct: 87 TLELEAGATLLFSDNFDDY--LPFVEVRHEGVMMKS--FQPLIYAVDAENITIKG-EGTL 141
Query: 173 NGQGEPWWIKYRKKQFNVT----------------------------------------R 192
+GQG+ WW+++ + ++ R
Sbjct: 142 DGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPLWDAANDTTAIYAETNKDYVNTLQRRFFR 201
Query: 193 PYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTI-RAPIDSPNTDGINPDSC 251
P I+ + V+I + +I+SP W V+P + NV I+G+TI AP SPNTDG+NP+SC
Sbjct: 202 PPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNPESC 259
Query: 252 TNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSG 311
N I D +I GDDC+ +KSG D ++G+P +++ I +S + +GSEMSG
Sbjct: 260 RNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS-GHGGVVIGSEMSG 318
Query: 312 GIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPD 370
++ V + T G+RIK+ GRG V++I V + M +K + Y P
Sbjct: 319 SVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMPA 378
Query: 371 PGFDPKA--LPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQ 428
+PK+ P ++ M NV K+ G+ P + I + ++ I+ K K +
Sbjct: 379 ---EPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ-GGKQKCIF 434
Query: 429 WNCTNI 434
NC I
Sbjct: 435 ENCERI 440
>gi|298481339|ref|ZP_06999532.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298272543|gb|EFI14111.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 464
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 123/416 (29%), Positives = 195/416 (46%), Gaps = 59/416 (14%)
Query: 63 GGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALL 122
G +GKT NTK N+ I L++ GG L P G +LTGS +L S+ TL + A L
Sbjct: 39 GAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNITLELEAGATL 95
Query: 123 LASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIK 182
L S + ++ LP + G F LI+ + ++ + G T++GQG+ WW++
Sbjct: 96 LFSDNFDDY--LPFVEVRHEGVMMKS--FQPLIYAVDAENITIKG-EGTLDGQGKKWWME 150
Query: 183 YRKKQFNVT----------------------------------------RPYLIEVMFSD 202
+ + ++ RP I+ +
Sbjct: 151 FFRVMIDLKDNGMRDVNKYQSMWDAANDTTAIYAETNKDYVNTLQRRFFRPPFIQPVRCK 210
Query: 203 NVQISNLTLIDSPSWNVHPVYSSNVLIQGLTI-RAPIDSPNTDGINPDSCTNTRIEDNYI 261
V+I + +I+SP W V+P + NV I+G+TI AP SPNTDG+NP+SC N I D +I
Sbjct: 211 KVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNPESCRNVHISDCHI 268
Query: 262 VSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDI 321
GDDC+ +KSG D ++G+P +++ I +S + +GSEMSG ++ V +
Sbjct: 269 SVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS-GHGGVVIGSEMSGSVRKVTISNC 327
Query: 322 TAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDPGFDPKA--L 378
T G+RIK+ GRG V++I V + M +K + Y P +PK+
Sbjct: 328 VFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMPA---EPKSERT 384
Query: 379 PTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNI 434
P ++ M NV K+ G+ P + I + ++ I+ K K + NC I
Sbjct: 385 PIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ-GGKQKCIFENCERI 439
>gi|423213419|ref|ZP_17199948.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
gi|392693879|gb|EIY87109.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
Length = 450
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 197/426 (46%), Gaps = 59/426 (13%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R + G +GKT NTK N+ I L++ GG L P G +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGIYLTGSIHLKSNI 76
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL + A LL S + ++ LP + G F LI+ + ++ + G T+
Sbjct: 77 TLELEAGATLLFSDNFDDY--LPFVEVRHEGVMMKS--FQPLIYAVDAENITIKG-EGTL 131
Query: 173 NGQGEPWWIKYRKKQFNVT----------------------------------------R 192
+GQG+ WW+++ + ++ R
Sbjct: 132 DGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNKDYVNTLQRRFFR 191
Query: 193 PYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTI-RAPIDSPNTDGINPDSC 251
P I+ + V+I + +I+SP W V+P + NV I+G+TI AP SPNTDG+NP+SC
Sbjct: 192 PPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNPESC 249
Query: 252 TNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSG 311
N I D +I GDDC+ +KSG D ++G+P +++ I +S + +GSEMSG
Sbjct: 250 RNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS-GHGGVVIGSEMSG 308
Query: 312 GIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPD 370
++ V + T G+RIK+ GRG V++I V + M +K + Y P
Sbjct: 309 SVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMPA 368
Query: 371 PGFDPKA--LPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQ 428
+PK+ P ++ M NV K+ G+ P + I + ++ I+ K K +
Sbjct: 369 ---EPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ-EGKQKCIF 424
Query: 429 WNCTNI 434
NC I
Sbjct: 425 ENCERI 430
>gi|423298602|ref|ZP_17276658.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
gi|392662345|gb|EIY55906.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
Length = 446
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 197/426 (46%), Gaps = 59/426 (13%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R + G +GKT NTK N+ I L++ GG L P G +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 76
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL + A LL S + ++ LP + G F LI+ + ++ + G T+
Sbjct: 77 TLELEAGATLLFSDNFDDY--LPFVEVRHEGVMMKS--FQPLIYAVDAENITIKG-EGTL 131
Query: 173 NGQGEPWWIKYRKKQFNVT----------------------------------------R 192
+GQG+ WW+++ + ++ R
Sbjct: 132 DGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPLWDAANDTTAIYAETNKDYVNTLQRRFFR 191
Query: 193 PYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTI-RAPIDSPNTDGINPDSC 251
P I+ + V+I + +I+SP W V+P + NV I+G+TI AP SPNTDG+NP+SC
Sbjct: 192 PPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNPESC 249
Query: 252 TNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSG 311
N I D +I GDDC+ +KSG D ++G+P +++ I +S + +GSEMSG
Sbjct: 250 RNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS-GHGGVVIGSEMSG 308
Query: 312 GIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPD 370
++ V + T G+RIK+ GRG V++I V + M +K + Y P
Sbjct: 309 SVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMPA 368
Query: 371 PGFDPKA--LPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQ 428
+PK+ P ++ M NV K+ G+ P + I + ++ I+ K K +
Sbjct: 369 ---EPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ-GGKQKCIF 424
Query: 429 WNCTNI 434
NC I
Sbjct: 425 ENCERI 430
>gi|237720811|ref|ZP_04551292.1| polygalacturonase [Bacteroides sp. 2_2_4]
gi|229449646|gb|EEO55437.1| polygalacturonase [Bacteroides sp. 2_2_4]
Length = 455
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 197/426 (46%), Gaps = 59/426 (13%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R + G +GKT NTK N+ I L++ GG L P G +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 76
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL + A LL S + ++ LP + G F LI+ + ++ + G T+
Sbjct: 77 TLELEAGATLLFSDNFDDY--LPFVEVRHEGVMMKS--FQPLIYAVDAENITIKG-EGTL 131
Query: 173 NGQGEPWWIKYRKKQFNVT----------------------------------------R 192
+GQG+ WW+++ + ++ R
Sbjct: 132 DGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNKDYVNTLQRRFFR 191
Query: 193 PYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTI-RAPIDSPNTDGINPDSC 251
P I+ + V+I + +I+SP W V+P + NV I+G+TI AP SPNTDG+NP+SC
Sbjct: 192 PPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNPESC 249
Query: 252 TNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSG 311
N I D +I GDDC+ +KSG D ++G+P +++ I +S + +GSEMSG
Sbjct: 250 RNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS-GHGGVVIGSEMSG 308
Query: 312 GIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPD 370
++ V + T G+RIK+ GRG V++I V + M +K + Y P
Sbjct: 309 SVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMPA 368
Query: 371 PGFDPKA--LPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQ 428
+PK+ P ++ M NV K+ G+ P + I + ++ I+ K K +
Sbjct: 369 ---EPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ-GGKQKCIF 424
Query: 429 WNCTNI 434
NC I
Sbjct: 425 ENCERI 430
>gi|294645183|ref|ZP_06722905.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294808093|ref|ZP_06766866.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|292639470|gb|EFF57766.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444734|gb|EFG13428.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 455
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 197/426 (46%), Gaps = 59/426 (13%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R + G +GKT NTK N+ I L++ GG L P G +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 76
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL + A LL S + ++ LP + G F LI+ + ++ + G T+
Sbjct: 77 TLELEAGATLLFSDNFDDY--LPFVEVRHEGVMMKS--FQPLIYAVDAENITIKG-EGTL 131
Query: 173 NGQGEPWWIKYRKKQFNVT----------------------------------------R 192
+GQG+ WW+++ + ++ R
Sbjct: 132 DGQGKKWWMEFFRVMIDLKDNGMRDVNKYQSMWDAANDTTAIYAETNKDYVNTLQRRFFR 191
Query: 193 PYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTI-RAPIDSPNTDGINPDSC 251
P I+ + V+I + +I+SP W V+P + NV I+G+TI AP SPNTDG+NP+SC
Sbjct: 192 PPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNPESC 249
Query: 252 TNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSG 311
N I D +I GDDC+ +KSG D ++G+P +++ I +S + +GSEMSG
Sbjct: 250 RNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS-GHGGVVIGSEMSG 308
Query: 312 GIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPD 370
++ V + T G+RIK+ GRG V++I V + M +K + Y P
Sbjct: 309 SVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMPA 368
Query: 371 PGFDPKA--LPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQ 428
+PK+ P ++ M NV K+ G+ P + I + ++ I+ K K +
Sbjct: 369 ---EPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ-GGKQKCIF 424
Query: 429 WNCTNI 434
NC I
Sbjct: 425 ENCERI 430
>gi|431796309|ref|YP_007223213.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787074|gb|AGA77203.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 524
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 125/399 (31%), Positives = 188/399 (47%), Gaps = 46/399 (11%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ D GG +G+ T+A +AI K A GG L P G +LTG+ ++ S+ TL++
Sbjct: 30 ILDVGGNNEGQLC-TEAIQSAID---KAAEAGGGTLFFPAGDYLTGAIHMKSNTTLHLDA 85
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A+L S + + LP + G FS LI+ ++ +T G I+GQG+
Sbjct: 86 GAVLRFSTNFDHY--LPFVQMRWEGT--VMNNFSPLIYAYEAENITIT-GRGKIDGQGKD 140
Query: 179 WWI----------------KYRK------------------KQFNVTRPYLIEVMFSDNV 204
WW+ KY+K + RP LI+ NV
Sbjct: 141 WWMEMYRIHEAAPETLEESKYQKMWTAANEGLETSPNYQKTMRLKFFRPPLIQPFRCKNV 200
Query: 205 QISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSG 264
+I +T+++SP W V+P + NV I G+TI P SPNTDGINP SC N I D++I G
Sbjct: 201 RIEGVTIVNSPFWTVNPAFCDNVTITGVTIENP-PSPNTDGINPTSCRNVHISDSHISVG 259
Query: 265 DDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAI 324
DDC+ +KSG D G K PT+++ I +S + +GSE+SG I+ V +
Sbjct: 260 DDCITIKSGRDMDGRKWDTPTENVTITNCTMLS-GHGGVVIGSEVSGSIRKVTISNCVFD 318
Query: 325 NTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDPGFDPKALPTVTG 383
T G+R+K A GRG V+EI V + MK ++ M Y + G + P
Sbjct: 319 GTDRGIRLKAARGRGGVVEEIRVDNVVMKDIQLEAIVMNLFYDKNTKEGPVTEETPAFRN 378
Query: 384 INYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTE 422
I+ ++ + + K+ GI P I SN+ + E
Sbjct: 379 IHISNVTGSQINVAGKILGIPEMPIDQISFSNINMDAKE 417
>gi|395803596|ref|ZP_10482840.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434150|gb|EJG00100.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 522
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 122/389 (31%), Positives = 186/389 (47%), Gaps = 54/389 (13%)
Query: 73 TKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWP 132
T+A AI SK +GG + P G++LTG+ L S+ T+++ ALL S++ ++
Sbjct: 39 TQAIQNAIEKASK---NGGGTIFFPAGEYLTGALTLKSNITIHLDSGALLKFSENFDDF- 94
Query: 133 LLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW------------ 180
LP + G F L + ++ ++ +TG I+GQG+ WW
Sbjct: 95 -LPYVEMRYEGIVMK--SFQPLFYAKDVENIAITG-RGIIDGQGKAWWNEVYRIETAKEP 150
Query: 181 ---IKYR---------------------KKQFNVTRPYLIEVMFSDNVQISNLTLIDSPS 216
KY+ KK F RP + N+ I +T +SP
Sbjct: 151 LPPTKYQTMWEEQNKGLYTEPYYKRTVDKKFF---RPSFFQAYNCKNILIEGVTFKNSPF 207
Query: 217 WNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDE 276
W ++P + NV + G++I P SPNTDGINP SCTN I D +I GDDC+ +KSG D
Sbjct: 208 WTINPEFCDNVRVTGISIFNP-HSPNTDGINPSSCTNVHISDCHISVGDDCITIKSGRDG 266
Query: 277 YGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAV 336
G K G T+++ I +S + +GSEMSGGIK + + T G+RIK+A
Sbjct: 267 DGRKYGKATENVTITNCTMLS-GHGGVVIGSEMSGGIKKITISNCVFDGTDRGIRIKSAR 325
Query: 337 GRGAYVKEIYVRRMTMKTMK---YVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADN 393
GRG V++I V + MK +K V + D G+ +P + P I+ ++ A N
Sbjct: 326 GRGGVVEDIRVDNIVMKNIKEEAIVLSLFYDKGTTVEP--VTEKTPIFRNIHMSNITASN 383
Query: 394 VTQSAKLDGIRNDPFTGICISNVTIKLTE 422
V ++ ++ GI P I SN+ + E
Sbjct: 384 VNKAGQILGITEMPIQNITFSNINMDGKE 412
>gi|386727675|ref|YP_006194001.1| hypothetical protein B2K_37015 [Paenibacillus mucilaginosus K02]
gi|384094800|gb|AFH66236.1| hypothetical protein B2K_37015 [Paenibacillus mucilaginosus K02]
Length = 505
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 120/401 (29%), Positives = 185/401 (46%), Gaps = 54/401 (13%)
Query: 70 TSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDES 129
T NT A AI S A GG + VP G ++TG L SH TL + ++L +
Sbjct: 16 TRNTPAIAAAIEACS---AGGGGTVYVPAGDYVTGPIVLRSHITLQLEAGSVLRFT---P 69
Query: 130 EWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYR----- 184
+ PP+ + G + G +S LI+G L V + G I GQG+ WW YR
Sbjct: 70 RFDAYPPVQTRWSGYEMWG--YSPLIYGNGLKQVAIKG-EGVIEGQGQAWWDAYRVIRAG 126
Query: 185 ----------------------------KKQFNVTRPYLIEVMFSDNVQISNLTLIDSPS 216
+ Q RP L+++M + V + +TL +SP
Sbjct: 127 GAAPASEHLPKLVELNRVLTDTVKSNIVEWQTQFLRPPLLQLMHCEEVVLEGITLQNSPF 186
Query: 217 WNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDE 276
WN H VY +V ++G+ + P +PN DG++ DSC+N RI D + GDDC+ +KSG DE
Sbjct: 187 WNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVDSCSNVRISDCHFDVGDDCLCLKSGIDE 246
Query: 277 YGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAV 336
G +VG PT+++ + + + LGSE +GGI++V + I T G+RIKT
Sbjct: 247 DGRRVGRPTENVAVTNCTMLH-GHGGVVLGSETAGGIRNVTISNCIFIGTDRGIRIKTNR 305
Query: 337 GRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPG----FDPKALPTVTG------INY 386
RG V+ + + + M+ + + Y D P+A+P G I
Sbjct: 306 ARGGGVENVRISNIYMEDVLCPLAINAFYKHGIDESNPLLTSPEAVPVTEGTPVIRHIQI 365
Query: 387 RDMVADNVTQSAK-LDGIRNDPFTGICISNVTIKLTEKPKE 426
D+ A N +A + G+ P + + +VT ++T P E
Sbjct: 366 SDVTAKNARAAAGFIYGLPEMPIEDVALRHVTFEMTLDPAE 406
>gi|431798433|ref|YP_007225337.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789198|gb|AGA79327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 477
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 210/426 (49%), Gaps = 65/426 (15%)
Query: 55 HSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTL 114
+ V++DFG VGDG T ++A +AI A GG +++VPPG + TG L S+ L
Sbjct: 56 QTFVISDFGAVGDGSTDASQAIKSAIQAC---AEAGGGKVVVPPGDYPTGPIYLESNVNL 112
Query: 115 YIHKDALLLASQDESEW-PLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATIN 173
++ KDA L+ S D ++ PL+ Y R +S L++ ++ +T G ++
Sbjct: 113 HLEKDARLMFSTDPKDYLPLV-----YTRWEGVELMNYSPLVYAFEEENIAIT-GEGILD 166
Query: 174 GQGEP--WWIKYRKKQFNVT------------------------------------RPYL 195
GQ WW K Q+ T RP
Sbjct: 167 GQANETNWWPWKGKTQYGYTEGDPQQEDADKRHALFQMAEDGVPVEERKFGEGFYLRPQF 226
Query: 196 IEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTR 255
++ NV + + +++SP W ++PV NV I+G+T+ + PN+DG +P+S N
Sbjct: 227 VQPYRCKNVLVEGVKIVNSPMWILNPVLCENVTIEGVTVES--HGPNSDGCDPESSKNVL 284
Query: 256 IEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIK 314
I+D Y +GDDC+A+KSG + G ++ +P++++II+ C D + +GSE+SGG++
Sbjct: 285 IKDCYFNTGDDCIAIKSGRNADGRRINVPSENIIIQN--CKMADGHGGVVIGSEISGGVR 342
Query: 315 DVRAE--DITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPG 372
+V AE ++ + + +RIKT+ RG +++IY+R + + + + + D G
Sbjct: 343 NVFAENCEMNSPHLDRALRIKTSSMRGGIIEDIYLRNIDVGQIAQQVVRVNMF--YEDSG 400
Query: 373 FDPKALPTVTGINYRDMVADNVTQ-SAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNC 431
+PTV I+ +M +N + L+G N P I + NV IK E+ +
Sbjct: 401 ---AYVPTVRNIHVENMTVENGGKVGVLLEGYENSPVENITLENVNIKNAEEA----YTF 453
Query: 432 TNIQGI 437
+N++G+
Sbjct: 454 SNVKGV 459
>gi|412993465|emb|CCO13976.1| predicted protein [Bathycoccus prasinos]
Length = 635
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 219/454 (48%), Gaps = 46/454 (10%)
Query: 11 ILHP--HVIKILSTLLTL----GLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGG 64
+ HP H +++ ++ T S E P + E L+C + G
Sbjct: 146 LFHPVFHARQVVDSMKTNFARDKFESSHATEKHPYSTKVSFECPVLSCVNVALA----GA 201
Query: 65 VGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK-DALLL 123
VGDG T NT+ A+ +L+ A L PPG+WLTG L S+ + + + L
Sbjct: 202 VGDGMTVNTETIQNALDSLTMKAQGRTQTLAFPPGRWLTGPLELKSNVKIVLDGPRSFLE 261
Query: 124 ASQDESEWPL-----LPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A + WP+ P LPS D+P F + I N T++ ++GG TING G+
Sbjct: 262 AVKSTDLWPIDDWKEHPSLPS-----DDPTPIFRAFIHAYNQTNIEISGG-GTINGHGDF 315
Query: 179 WWIKYRKKQFNVTR------PYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
WW + ++++ + P L+ ++ +V+I N+ L +SP + V P Y + V + +
Sbjct: 316 WWDRKTDQKYSPSMRKKAHVPNLVHLVGCSDVKIENIVLTNSPHFTVRPQYCNKVSVSRI 375
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGD--DCVAVKSGWDEYGIKVGMPTQHLII 290
I P +SP T+G+ DS +N+ + D++I +GD D VA+KSG D +G K +P++++ +
Sbjct: 376 HISNPANSPGTNGVVFDSTSNSFLRDSFITTGDKEDAVAIKSGKDYHGRKANVPSKNIRV 435
Query: 291 RRLICISPDSAAIALGSEMSGGIKDVRAEDIT--AINTQSGV---RIKTAVGRGAYVKEI 345
+ + A+++GSEMSGG+ ++ DIT N + GV R+KT GRG V +I
Sbjct: 436 EHVTILG--GHALSVGSEMSGGVSNIIFSDITFDGRNNKFGVGSARVKTMRGRGGVVDQI 493
Query: 346 YVRRMTMKTMKYVFWMTGDYGSHPDPGFDP---KALPTVTGINYRDMVADNVTQSAK-LD 401
+ + Y + +Y S D P + P V IN++++ + + + A +
Sbjct: 494 TFQNIRGWNALYALELY-EYYSKQDTNVGPVSREETPIVKNINFKNVHIEGIKRYAGVIA 552
Query: 402 GIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQ 435
G+ + + I NV + K WNC +
Sbjct: 553 GLPEMAVSNLVIENVHLTNVHK----GWNCHKFK 582
>gi|146301824|ref|YP_001196415.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156242|gb|ABQ07096.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 522
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 121/389 (31%), Positives = 186/389 (47%), Gaps = 54/389 (13%)
Query: 73 TKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWP 132
T+A AI SK +GG + P G++LTG+ L S+ T+++ ALL S++ ++
Sbjct: 39 TQAIQNAIEKASK---NGGGTIFFPAGEYLTGALTLRSNITIHLDSGALLKFSENFDDF- 94
Query: 133 LLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW------------ 180
LP + G F L + ++ ++ +TG I+GQG+ WW
Sbjct: 95 -LPYVEMRYEGIVMK--SFQPLFYAKDVQNITITG-RGVIDGQGKAWWNEVYRIETAKEP 150
Query: 181 ---IKYR---------------------KKQFNVTRPYLIEVMFSDNVQISNLTLIDSPS 216
KY+ KK F RP + N+ I +T +SP
Sbjct: 151 LPPTKYQTMWEEQNKGLYTEPYYKRTVDKKFF---RPSFFQAYNCKNILIEGVTFQNSPF 207
Query: 217 WNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDE 276
W ++P + NV + G++I P SPNTDGINP SCTN I + +I GDDC+ +KSG D
Sbjct: 208 WTINPEFCDNVTVTGISIFNP-HSPNTDGINPSSCTNVHISNCHISVGDDCITIKSGRDG 266
Query: 277 YGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAV 336
G K G T+++ I +S + +GSEMSGGIK + + T G+RIK+A
Sbjct: 267 DGRKYGKATENVTITNCTMLS-GHGGVVIGSEMSGGIKKITISNCVFDGTDRGIRIKSAR 325
Query: 337 GRGAYVKEIYVRRMTMKTMK---YVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADN 393
GRG V++I V + MK +K V + D G+ +P + P I+ ++ A N
Sbjct: 326 GRGGVVEDIRVDNIVMKNIKEEAIVLSLFYDKGTQVEP--VTEKTPIFRNIHMSNITASN 383
Query: 394 VTQSAKLDGIRNDPFTGICISNVTIKLTE 422
V ++ ++ GI P I SN+ + E
Sbjct: 384 VNKAGQILGITEMPIQNITFSNINMDGKE 412
>gi|295084333|emb|CBK65856.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 430
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 123/416 (29%), Positives = 195/416 (46%), Gaps = 59/416 (14%)
Query: 63 GGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALL 122
G +GKT NTK N+ I L++ GG L P G +LTGS +L S+ TL + A L
Sbjct: 5 GAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNITLELEAGATL 61
Query: 123 LASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIK 182
L S + ++ LP + G F LI+ + ++ + G T++GQG+ WW++
Sbjct: 62 LFSDNFDDY--LPFVEVRHEGVMMKS--FQPLIYAVDAENITIKG-EGTLDGQGKKWWME 116
Query: 183 YRKKQFNVT----------------------------------------RPYLIEVMFSD 202
+ + ++ RP I+ +
Sbjct: 117 FFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNKDYVNTLQRRFFRPPFIQPVRCK 176
Query: 203 NVQISNLTLIDSPSWNVHPVYSSNVLIQGLTI-RAPIDSPNTDGINPDSCTNTRIEDNYI 261
V+I + +I+SP W V+P + NV I+G+TI AP SPNTDG+NP+SC N I D +I
Sbjct: 177 KVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNPESCRNVHISDCHI 234
Query: 262 VSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDI 321
GDDC+ +KSG D ++G+P +++ I +S + +GSEMSG ++ V +
Sbjct: 235 SVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS-GHGGVVIGSEMSGSVRKVTISNC 293
Query: 322 TAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDPGFDPKA--L 378
T G+RIK+ GRG V++I V + M +K + Y P +PK+
Sbjct: 294 VFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMPA---EPKSERT 350
Query: 379 PTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNI 434
P ++ M NV K+ G+ P + I + ++ I+ K K + NC I
Sbjct: 351 PIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ-GGKQKCIFENCERI 405
>gi|407978683|ref|ZP_11159511.1| glycoside hydrolase [Bacillus sp. HYC-10]
gi|407414714|gb|EKF36344.1| glycoside hydrolase [Bacillus sp. HYC-10]
Length = 463
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 201/406 (49%), Gaps = 59/406 (14%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
+G G+ +T A +AI + + G ++++P G +LTG+ L SH L++H++A
Sbjct: 59 YGADEKGEVLSTNAIQSAIDDAHRLK---GGRVVIPKGTFLTGALELKSHVELHLHENAY 115
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP--W 179
+ SQD ++ LP + + G + +S LI+ + ++ +TG + T++G+G+ W
Sbjct: 116 VTFSQDPRDY--LPLVLTRYEGIELY--NYSPLIYAHHAENMAITG-SGTLDGRGDEHHW 170
Query: 180 W-IKY---------RKKQF-------------------NVTRPYLIEVMFSDNVQISNLT 210
W KY R +Q + R I+ N+ I +T
Sbjct: 171 WPWKYGTNGQPSQDRDRQLLFEMAEKRIPVEERVFGEGHYLRSSFIQPYQCQNILIEGVT 230
Query: 211 LIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAV 270
+ DSP W +HPV NV+++G+ I PNTDG+NP+SC N IED Y +GDDC+A+
Sbjct: 231 VKDSPMWQIHPVLCENVIVRGVNIIG--HGPNTDGVNPESCRNVLIEDCYFDNGDDCIAI 288
Query: 271 KSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAED--ITAINTQS 328
KSG +E G ++G+P+++++IRR + + +GSE+SGG++ V AED + + N
Sbjct: 289 KSGRNEDGRRIGVPSENIVIRRN-EMRDGHGGVTIGSEISGGVRYVYAEDNIMDSPNLDR 347
Query: 329 GVRIKTAVGRGAYVKEIYVRRMTMKTMKY------VFWMTGDYGSHPDPGFDPKALPTVT 382
+RIKT RG ++ IY + T+K++K+ + + GD G H P V
Sbjct: 348 ALRIKTNSVRGGTIEHIYFKNNTVKSLKHEVVCIDMMYEEGDAGPHK---------PVVR 398
Query: 383 GINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQ 428
I + + K+ + P T + + I P L+
Sbjct: 399 HIEVEGLKSSGGRYGVKIAAYPHSPVTHFKMKDCVIDDVTYPLSLE 444
>gi|383113004|ref|ZP_09933785.1| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
gi|382948911|gb|EFS29452.2| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
Length = 444
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 121/416 (29%), Positives = 195/416 (46%), Gaps = 59/416 (14%)
Query: 63 GGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALL 122
G +GK NTK N+ I L++ GG L P G +LTGS +L S+ TL + A L
Sbjct: 30 GAKANGKALNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNITLELEAGATL 86
Query: 123 LASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIK 182
L S + ++ LP + G F LI+ + ++ + G T++GQG+ WW++
Sbjct: 87 LFSDNFDDY--LPFVEVRHEGVMMKS--FQPLIYAVDAENITIKG-EGTLDGQGKKWWME 141
Query: 183 YRKKQFNVT----------------------------------------RPYLIEVMFSD 202
+ + ++ RP I+ +
Sbjct: 142 FFRVMIDLKDNGMRDINKYQPMWDAANDTTAIYAETNKDYVTTLQRRFFRPLFIQPVRCK 201
Query: 203 NVQISNLTLIDSPSWNVHPVYSSNVLIQGLTI-RAPIDSPNTDGINPDSCTNTRIEDNYI 261
V+I + +I+SP W V+P + NV+I+G+TI AP SPNTDG+NP+SC N I D +I
Sbjct: 202 KVKIEGVKIINSPFWTVNPEFCDNVIIKGITIDNAP--SPNTDGVNPESCRNVHISDCHI 259
Query: 262 VSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDI 321
GDDC+ +KSG D ++G+P +++ I +S + +GSEMSG ++ V +
Sbjct: 260 SVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS-GHGGVVIGSEMSGSVRKVTISNC 318
Query: 322 TAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDPGFDPKA--L 378
T G+RIK+ GRG V++I V + M +K + Y P +PK+
Sbjct: 319 VFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMPA---EPKSERT 375
Query: 379 PTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNI 434
P ++ M +V K+ G+ P + I + ++ I+ K K + NC I
Sbjct: 376 PIFRNVHISGMTVTDVKTPIKIVGLEEAPISDIVLRDIHIQ-GGKQKCIFENCERI 430
>gi|373469919|ref|ZP_09561077.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
gi|371763536|gb|EHO52007.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
Length = 526
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/384 (31%), Positives = 184/384 (47%), Gaps = 28/384 (7%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG GDG +++ AI+ K DG + +P GK+L L S+ L+I K
Sbjct: 85 VKDFGAAGDGVKTDSVCIQAAINACPK---DG--TVYIPKGKYLCTPVFLKSNIDLWIDK 139
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDE---------PGGRFSSLIFGTNLTDVVVTGGN 169
DA+L+ +D ++P+LP + DE P F++LI G ++ +V++ G
Sbjct: 140 DAILIGEKDRKKYPILPGMTQSSDENDEYNIGSWEGNPLDCFAALITGISVENVLIFGEG 199
Query: 170 ATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
G W K KK+ RP + + N+ + L +++SPSW +HP YS N+L
Sbjct: 200 ILDGNAGMLDWWKDAKKKNIAWRPNTVFLYNCKNIAMQGLCIMNSPSWTLHPYYSDNLLF 259
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
TI P +SPNTDG++P+SC N I I GDDCVA+KSG +K P ++++
Sbjct: 260 LNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCVAIKSGKYYMALKHYKPAKNIV 319
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG--AYVKEIYV 347
IR I ++ +GSE++ G+ DVR T G+RIKT GRG + + I
Sbjct: 320 IRNSI-FRKGHGSVTIGSEVAAGVYDVRVGKCIFEGTDRGLRIKTRRGRGEKSVLDNICF 378
Query: 348 RRMTMKTMKYVFWMTGDYGSHPDPGFD----------PKALPTVTGINYRDMVADNVTQ- 396
+ MK + F Y PD D + P + I RD+ +NV
Sbjct: 379 ENILMKDVCMPFTANMFYFCDPDGHSDYVQNQDKMEVNEKTPKIGKIAARDIRCENVKNI 438
Query: 397 SAKLDGIRNDPFTGICISNVTIKL 420
A L G+ P I + N+T+
Sbjct: 439 FACLYGLPEMPVEEIVLENITLNF 462
>gi|146301851|ref|YP_001196442.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156269|gb|ABQ07123.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 560
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 146/534 (27%), Positives = 247/534 (46%), Gaps = 106/534 (19%)
Query: 22 TLLTLGLLSPQVAECRPTKNSYTIEFQALNCR-----KHSAVLTDFGGVGDGKTSNTKAF 76
T+L + P +A+ + + IEF+ + K+S + DFG V G NTKAF
Sbjct: 14 TILAVSFSVPVLAQ-KASDTYKDIEFKMAKIKEPVIPKNSVNIKDFGAVNGGYVLNTKAF 72
Query: 77 NTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPP 136
AI +SK GG ++I+PPG WLTG L S+ L+ + AL+ S D+S +P++
Sbjct: 73 ADAIDAVSK---KGGGKVIIPPGIWLTGPIILKSNIELHAERGALIKFSTDKSLYPII-- 127
Query: 137 LPSYGRGRDEPG---GRFSSLIFGTNLTDVVVTGGNATINGQGEPW------------WI 181
G + G R S I+G NL ++ TG N +G GE W W
Sbjct: 128 ------GTNFEGLNTWRCISPIYGKNLENIAFTG-NGVWDGSGEVWRQVKKSKLTESQWK 180
Query: 182 KY------------------------------------RKKQFNVTRPYLIEVMFSDNVQ 205
K+ K++F +L VM S +Q
Sbjct: 181 KFVSSGGVLNKDKTSWYPSETFMNASKGADQNVRPDLKTKEEFETIHDFLRPVMVS--IQ 238
Query: 206 ISNLTLID------SPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDN 259
S L D SP+WN+HP +++++ +T+R P S N DG++ + C N +E++
Sbjct: 239 NSKRVLFDGPVFQNSPAWNIHPFMVEDLIVRNVTVRNPWYSQNGDGLDVECCKNVLVENS 298
Query: 260 YIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAE 319
GDD + +KSG D+ G++ G+P +++I+R I + + +GSEMSGG+K++
Sbjct: 299 SFDVGDDAICIKSGKDKDGLERGIPCENIIVRNNI-VYHGHGGVTVGSEMSGGVKNLHVS 357
Query: 320 DITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM-----KTMKYVFWMTG-DYGSHPDPGF 373
+ T + T G+R K+A GRG V+ I++ + M + + + + G + G
Sbjct: 358 NCTFMGTDVGLRFKSARGRGGVVENIFISDVFMTDIPSQAISFNLYYGGKSIAETLEEGG 417
Query: 374 DP---KALP-TVTGINYRDMVADNVT-----QSAKLDGIRNDPFTGICISNVTIKLTEKP 424
D KA+P T+ ++++ N+T Q+ L G+ I ISN+T+
Sbjct: 418 DKIVNKAMPVTIETPQFKNISIKNITIKGAQQAVFLQGLPEMNLENIEISNLTV-----T 472
Query: 425 KELQWNCTNIQGITSRVTPQACELLPKKEPTDCF--FPDDKLPIDDVRLNTCSA 476
E ++ + +GI ++T ++ E ++ F + + + DV N+ SA
Sbjct: 473 AEKGFSIIDAKGI--KITNAKLDI----ENSNVFEVYNVKNMSLKDVEFNSTSA 520
>gi|336402515|ref|ZP_08583249.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
gi|335948128|gb|EGN09853.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
Length = 455
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 196/426 (46%), Gaps = 59/426 (13%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R + G +GKT NTK N+ I L++ GG L P G +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 76
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL + A LL S + ++ LP + G F LI+ + ++ + G T+
Sbjct: 77 TLELEAGATLLFSDNFDDY--LPFVEVRHEGVMMKS--FQPLIYAVDAENITIKG-EGTL 131
Query: 173 NGQGEPWWIKYRKKQFNVT----------------------------------------R 192
+GQG+ WW+++ + ++ R
Sbjct: 132 DGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNKDYVNTLQRRFFR 191
Query: 193 PYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTI-RAPIDSPNTDGINPDSC 251
P I+ + V+I + +I+SP W V+P + NV I+G+TI AP SPNTDG+NP+SC
Sbjct: 192 PPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNPESC 249
Query: 252 TNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSG 311
N I D +I GDDC+ +KSG D ++G+P +++ I +S + +GSEMSG
Sbjct: 250 RNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS-GHGGVVIGSEMSG 308
Query: 312 GIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPD 370
+ V + T G+RIK+ GRG V++I V + M +K + Y P
Sbjct: 309 SVCKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMPA 368
Query: 371 PGFDPKA--LPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQ 428
+PK+ P ++ M NV K+ G+ P + I + ++ I+ K K +
Sbjct: 369 ---EPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ-GGKQKCIF 424
Query: 429 WNCTNI 434
NC I
Sbjct: 425 ENCERI 430
>gi|399889206|ref|ZP_10775083.1| glycoside hydrolase family protein [Clostridium arbusti SL206]
Length = 756
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 196/411 (47%), Gaps = 57/411 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ D+G VGDG T ++KA AI A G +++P G + T L S TL I K
Sbjct: 147 VKDYGAVGDGVTKDSKAIQDAID-----ACTPGGVVVIPAGTYYTAPLKLKSDMTLNIEK 201
Query: 119 DALLLASQDESEWPLL------PPLPSY---------------GRGR--------DEPGG 149
A +LAS+D S++ ++ SY G G E
Sbjct: 202 GATILASRDVSDYKIIDSRWEGTSFKSYMSIITAIDAKNLNIIGEGTIDGNAGPIKEAAA 261
Query: 150 RFSSLIFGTNLTDVVVTG------------GNATINGQGEPWWI--KYRKKQFNVTRPYL 195
+ +G + V V+G + +N WW K RP
Sbjct: 262 GETEDAYGYPVNKVNVSGEYDYNMGKYNGDKSTAVNFDMGLWWDNPKATDPTKQTARPRT 321
Query: 196 IEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIR---APIDSPNTDGINPDSCT 252
I+++ D V I + + +SPSW +HP+YS N+ I + ++ +P+DSPNTDG++PDS
Sbjct: 322 IQLINCDGVLIQGVKVQNSPSWTIHPLYSKNITIADVNVKNPSSPVDSPNTDGLDPDSVD 381
Query: 253 NTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGG 312
N + + GDDC+A+KSG D G K+G+P+ ++ IR + + + LGSEMSGG
Sbjct: 382 NLLVVNTTFDVGDDCIAIKSGKDAEGRKIGIPSSNITIRNSLMLHG-HGGVTLGSEMSGG 440
Query: 313 IKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDP 371
I ++ +D +T GVR+KT GRG ++++ + MK + F + +Y S+ P
Sbjct: 441 INNINIKDDIFDSTNIGVRLKTLRGRGGVIQDVVFDNIMMKNISSDAFNINSNYSSNGAP 500
Query: 372 ----GFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
G + PT+ + ++++ A +++ G++ P G+ +SN+ +
Sbjct: 501 LPYTGVVDETTPTIKNLVFKNITAIGAKEASFFQGLQEMPVDGVTLSNINV 551
>gi|346223719|ref|ZP_08844861.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 567
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 170/349 (48%), Gaps = 69/349 (19%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
++DFG +GDG T N++AF +I ++ AA+GG +++V G WLTG + S+ LY+
Sbjct: 60 ISDFGAIGDGITDNSEAFAASIDDV---AANGGGKVVVSRGIWLTGPIKMKSNINLYLED 116
Query: 119 DALLLASQDESEWPLLPP----LPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATING 174
A++L S D ++PL+ L +Y R S I NL ++ TG N +G
Sbjct: 117 GAVVLFSSDFDKYPLIETSFEGLETY---------RCMSPIHAHNLENIAFTG-NGVFDG 166
Query: 175 QGEPW-----------------------------WIKYRKKQ-------FNV-------- 190
G+ W W K + FNV
Sbjct: 167 SGDAWRPVKKSKMTASQWKNLVESGGVLSDDGKIWYPTEKSKAGDGKDNFNVPDLSSKEE 226
Query: 191 -------TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNT 243
RP ++ + V + T +SP+WN+HP+ S NV+I+ LTIR P S N
Sbjct: 227 YEKVKDFLRPVMVSIKECKGVLLDGPTFQNSPAWNIHPLMSENVIIRNLTIRNPWYSQNG 286
Query: 244 DGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAI 303
DG++ +SC N I +N GDD + KSG +E G + GMPT+++I++ I +
Sbjct: 287 DGLDLESCKNVLIYNNSFDVGDDAICFKSGKNEDGRRRGMPTENVIVKNNI-VYHGHGGF 345
Query: 304 ALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+GSEMSGG+++V T + T +G+R K+ GRG V+ IY+ + M
Sbjct: 346 VVGSEMSGGVRNVHVSKCTFMGTDTGLRFKSTRGRGGVVENIYISDIDM 394
>gi|90020600|ref|YP_526427.1| glycoside hydrolase family protein [Saccharophagus degradans 2-40]
gi|89950200|gb|ABD80215.1| polygalacturonase-like protein [Saccharophagus degradans 2-40]
Length = 463
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 202/407 (49%), Gaps = 54/407 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L +FGG + NT AF AI+ SK GG +++VP G++ TG+ +L S+ L+I +
Sbjct: 55 LLEFGG--KEGSDNTLAFKKAIAACSKA---GGGKVVVPAGRFETGAIHLESNVNLHISE 109
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A + D + LP + + G + G +S LI+ T++ +TG T++GQ +P
Sbjct: 110 GATIAFFTDPKYY--LPAVFTRWEGMECMG--YSPLIYAYGKTNIAITG-KGTLDGQADP 164
Query: 179 --WWIKYRKKQFNVT---------------------------------RPYLIEVMFSDN 203
WW K++ V RP ++ +N
Sbjct: 165 THWWAWKGNKEWGVEGYPSQKESRNQLFAQAEAGDPVRERVYADGHYLRPSFVQPYKCEN 224
Query: 204 VQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVS 263
V I ++T+I++P W +HP S NV ++G+ + + PN+DG +P+SC N IE+ + +
Sbjct: 225 VLIEDITIINAPFWLLHPTLSQNVTVRGVHLESL--GPNSDGCDPESCKNVVIENCFFNT 282
Query: 264 GDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAED--I 321
GDDC+A+KSG + G ++ PT+++IIR + + +GSE+SGG+++V AE+ +
Sbjct: 283 GDDCIAIKSGRNNDGRRLATPTENVIIRNCK-MEAGHGGVVIGSEISGGVRNVFAENNVM 341
Query: 322 TAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTV 381
++ + + G+RIKT RG ++ IYVR T+ ++ + Y FD PTV
Sbjct: 342 SSPDLEKGIRIKTNSVRGGLLENIYVRNCTIGEVQQAIVINFQYEEGDAGKFD----PTV 397
Query: 382 TGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQ 428
+ R++V + Q + G P I + T + P ++
Sbjct: 398 RNVEIRNLVCQHALQVFNIRGFERAPIQNFRIIDSTFVRGDNPGVIE 444
>gi|198277233|ref|ZP_03209764.1| hypothetical protein BACPLE_03445 [Bacteroides plebeius DSM 17135]
gi|198269731|gb|EDY94001.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 478
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 205/436 (47%), Gaps = 77/436 (17%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG V DGKT NT+A N AI K +A GG ++I+P G WLTG L S+ LY +
Sbjct: 16 IKDFGAVADGKTLNTEAINKAIQ---KVSARGGGKVIIPQGLWLTGPIELQSNVNLYTEE 72
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
++L+L S + +++P++ R R S I N ++ +TG + +G G+
Sbjct: 73 NSLILFSDNFNDYPIIETSFEGLETR-----RCQSPISAVNAENIAITG-HGVFDGAGDS 126
Query: 179 W------------W-------------IKY----------------------RKKQFNVT 191
W W I Y ++Q+N
Sbjct: 127 WRPVKKGKMTESQWKSLLASGGVVENNIWYPTEGSLKGAKACKEFNNPEGIETEEQWNEI 186
Query: 192 RPYLIEVMFS----DNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGIN 247
RP+L V+ S NV + +T +SPSW +HP+ ++ I G+ + P S N D ++
Sbjct: 187 RPWLRPVLLSLAKCKNVLLKGVTFKNSPSWCLHPLSCEHITIDGVKVFNPWYSQNGDALD 246
Query: 248 PDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGS 307
+SCTN + +N +GDD + +KSG DE G K G P Q++I++ + + +GS
Sbjct: 247 LESCTNALVINNVFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNVVLH-GHGGFVVGS 305
Query: 308 EMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY------VFW- 360
EMSGG+K++ D T + T G+R K+ GRG V+ I++ + M + + +F+
Sbjct: 306 EMSGGVKNIYVSDCTFLGTDVGLRFKSTRGRGGVVENIHIHNINMIDIPHEALLFDLFYG 365
Query: 361 --MTGDYGSHPDPGFDPKALPTVTGIN--YRDMVADNVT-----QSAKLDGIRNDPFTGI 411
G+ + G +P VT +RD+ NVT ++ +G+ P +
Sbjct: 366 GKAAGEETAEELAGRMKAEVPPVTEETPAFRDIYISNVTARGVGRAMFFNGLPEMPIRNV 425
Query: 412 CISNVTIKLTEKPKEL 427
I +VT+ EK E+
Sbjct: 426 HIKDVTVSRAEKGIEI 441
>gi|409198539|ref|ZP_11227202.1| glycoside hydrolase [Marinilabilia salmonicolor JCM 21150]
Length = 531
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 196/384 (51%), Gaps = 39/384 (10%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG +N K+ + + GG ++++P G WLTG +L S+ L++ +
Sbjct: 68 IRDFGA-RQKNNNNHKSTDAIHRAIDAATTAGGGKVLIPRGNWLTGPIHLKSNINLHLEE 126
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A L S+D+ ++ LP + G + +SSLI+ N+ +V +TG + GQGE
Sbjct: 127 GASLYFSEDKEDY--LPVVKHRYEGVETY--NYSSLIYAKNIENVAITG-KGILEGQGEH 181
Query: 179 WWIKY---------------RKKQFNV------TRPYLIEVMFSDNVQISNLTLIDSPSW 217
W +K+ R+K F RP + S N+ I +TL +SP W
Sbjct: 182 W-LKWGTVQPRATATKVPLSRRKNFGKGAGKEGMRPSFVVFWKSKNIFIEGITLRESPMW 240
Query: 218 NVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEY 277
N+H +YSS+++++ +TI + ++S N DGI DS ++ +E N++ +GDD + +KSG++E
Sbjct: 241 NIHLIYSSHIVVRDITINS-VESHNGDGIVLDSSSDALLEYNHLSTGDDAIVLKSGFNEE 299
Query: 278 GIKVGMPTQHLIIRRLIC--ISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTA 335
G+++ +PT++++IR + S + GSE SGGI+++ D G+R KTA
Sbjct: 300 GLEINIPTENVVIRNYYAYDVRTGSGGVVFGSETSGGIRNIYVHDALFEKCDRGIRFKTA 359
Query: 336 VGRGAYVKEIYVRRMTMKTMKY--VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADN 393
GRG + I + + MK ++Y + + T G+ P P V I R++ D
Sbjct: 360 RGRGNITENIIISDVQMKNIRYEAINFNTAYTGAGVGPS------PLVRNIEIRNVKIDG 413
Query: 394 VTQSAKLDGIRNDPFTGICISNVT 417
V + L+G+ I + N++
Sbjct: 414 VPNAIVLNGLPEKWIENIYMENIS 437
>gi|380695284|ref|ZP_09860143.1| polygalacturonase (Pectinase) [Bacteroides faecis MAJ27]
Length = 438
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 189/404 (46%), Gaps = 56/404 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ G +GK NTK NT I L++ +GG L P G +LTGS L S+ TL +
Sbjct: 19 MLKIGAKANGKVLNTKLINTTIDRLNR---NGGGTLFFPAGTYLTGSIRLKSNITLELEA 75
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A LL S + ++ LP + G F LI+ + ++ + G T++GQG+
Sbjct: 76 GATLLFSDNFDDY--LPFVEVRHEGVMMKS--FQPLIYAVDAENITIKG-EGTLDGQGKK 130
Query: 179 WWIKYRKKQFNVT----------------------------------------RPYLIEV 198
WW+++ + ++ RP I+
Sbjct: 131 WWMEFFRVMIDLKDNGMHDLNKYQPMWDAENDTTAIYTETNKDYVSTLQRRFFRPPFIQP 190
Query: 199 MFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIED 258
+ V+I + +++SP W V+P + NV I+G+TI + SPNTDGINP+SC N I D
Sbjct: 191 VRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITIDN-VPSPNTDGINPESCRNVHISD 249
Query: 259 NYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRA 318
+I GDDC+ +KSG D ++G+P +++ I +S + +GSEMSG ++ V
Sbjct: 250 CHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS-GHGGVVIGSEMSGSVRKVTI 308
Query: 319 EDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDPGFDPKA 377
+ T+ G+RIK+ GRG V++I V + M +K + Y P +PK+
Sbjct: 309 SNCVFDGTERGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVVLNLKYSPMPA---EPKS 365
Query: 378 --LPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
P ++ M +V K+ G+ P + I + ++ I+
Sbjct: 366 ERTPIFRNVHISGMTVTDVKTPIKIVGLEEAPISDIVLRDIHIQ 409
>gi|196228361|ref|ZP_03127228.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
gi|196227764|gb|EDY22267.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
Length = 469
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 197/425 (46%), Gaps = 51/425 (12%)
Query: 40 KNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPG 99
K+ IE + + S + FGG GDGK NT+AF AI +K GG +++VPPG
Sbjct: 27 KDPVPIEPRPAVIPQRSVSILQFGGKGDGKALNTEAFRAAIQACAKA---GGGRVVVPPG 83
Query: 100 KWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTN 159
+ TG L SH L + K A++ AS S++ L PLP+ + D LI GT
Sbjct: 84 TFRTGPIELASHVALIVEKGAIIQASDRFSDFGLPDPLPATQQEIDGYKKLLRPLISGTK 143
Query: 160 LTDVVVTGGNATINGQGEPWWIKYR----------------------------------K 185
L D+ + G I+G G WW K +
Sbjct: 144 LDDIAI-AGEGIIDGAGSGWWAKSDKAAERAAAAAKAGESASTKPADSTSPKSEKPAPPE 202
Query: 186 KQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
K V RP+LI + V + +TL +SP ++ P + +V+++ +TI +P D+PNTDG
Sbjct: 203 KPLYVPRPFLITLRDCARVHLQGVTLRNSPMFHFVPHHCHDVVVEDVTIFSPADAPNTDG 262
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
I+P + + I I +GDD +AVK G G+ PT+++ + C +++
Sbjct: 263 IDPANSRDVLIRRCTIDTGDDNIAVKGG----GV-ANEPTENVTVTD--CKFLHGHGVSI 315
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-----YVFW 360
GSE G+++ + NT + +RIK+ RG V+ + R +TMK ++ ++F+
Sbjct: 316 GSETEAGVRNFLVQRCAFENTGTALRIKSDRTRGGVVENVLYRDITMKNVETAITIFLFY 375
Query: 361 MTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSA-KLDGIRNDPFTGICISNVTIK 419
+HP+ K P V I ++ +V T+ A +L G+ P + + +V I
Sbjct: 376 DDKKAAAHPELAPVTKQTPMVRNITFQKIVCHGTTRKAGELVGLPESPISDVVFDDVHID 435
Query: 420 LTEKP 424
P
Sbjct: 436 GAAAP 440
>gi|430837653|ref|ZP_19455615.1| polygalacturonase [Enterococcus faecium E0680]
gi|430840334|ref|ZP_19458261.1| polygalacturonase [Enterococcus faecium E0688]
gi|430859274|ref|ZP_19476887.1| polygalacturonase [Enterococcus faecium E1552]
gi|430487167|gb|ELA63937.1| polygalacturonase [Enterococcus faecium E0680]
gi|430489820|gb|ELA66395.1| polygalacturonase [Enterococcus faecium E0688]
gi|430544018|gb|ELA84068.1| polygalacturonase [Enterococcus faecium E1552]
Length = 445
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 181/349 (51%), Gaps = 24/349 (6%)
Query: 88 ADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEP 147
+DGG ++VP G++LTG+ L S+ L++ A+L S D ++P++ + R
Sbjct: 28 SDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVH 82
Query: 148 GGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVT--RPYLIEVMFSDNVQ 205
++S I+ N+ ++ VTG T++G G+ WW +R + N+ RP L+ +
Sbjct: 83 RKVYASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRIT 141
Query: 206 ISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGD 265
+ N+ LI SPSW ++P+ SN LTI P DSPNTDGI+P+SC N RI + +I GD
Sbjct: 142 VKNIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGD 201
Query: 266 DCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN 325
DC+A+K+G ++ ++ +++ I + + LGSEMSG I+++ +
Sbjct: 202 DCIAIKAGTEDTYERIA--CENITITNCTMVH-GHGGVVLGSEMSGSIRNITISNCIFQE 258
Query: 326 TQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-----YVFWMTGDYGSHPDPGFDPKAL-- 378
T G+R+K+ GRG V++I V + M + +++ G G P ++ KA
Sbjct: 259 TDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYV-WEKKAYPI 317
Query: 379 ----PTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNVTIKLTE 422
P I++ ++ A NV SA + G+ I N+ + + +
Sbjct: 318 DERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQ 366
>gi|337752008|ref|YP_004646170.1| hypothetical protein KNP414_07814 [Paenibacillus mucilaginosus
KNP414]
gi|336303197|gb|AEI46300.1| hypothetical protein KNP414_07814 [Paenibacillus mucilaginosus
KNP414]
Length = 506
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 122/412 (29%), Positives = 189/412 (45%), Gaps = 54/412 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+T +G GDG NT A AI S A GG + VP G ++TG L SH TL +
Sbjct: 6 ITSYGAQGDGLQDNTAAIAAAIEACS---AGGGGTVYVPAGDYVTGPIVLRSHITLQLEA 62
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
++L + + P+ + G + G +S LI+G L V + G I GQG+
Sbjct: 63 GSMLRFT---PRFDAYAPVQTRWSGYEMWG--YSPLIYGNGLKQVAIK-GEGVIEGQGQA 116
Query: 179 WWIKYR---------------------------------KKQFNVTRPYLIEVMFSDNVQ 205
WW YR + Q RP L+++M + V
Sbjct: 117 WWDAYRVIRAGGTAPASEHLPKLVELNRVLTDTVKSNIVEWQTQFLRPPLLQLMHCEEVV 176
Query: 206 ISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGD 265
+ +TL +SP WN H VY +V ++G+ + P +PN DG++ DSC+N RI D + GD
Sbjct: 177 LEGITLQNSPFWNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVDSCSNVRISDCHFDVGD 236
Query: 266 DCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN 325
DC+ +KSG D G +VG PT+++ + + + LGSE +GGI++V + I
Sbjct: 237 DCLCLKSGIDADGRRVGRPTENVAVTNCTMLH-GHGGVVLGSETAGGIRNVTISNCIFIG 295
Query: 326 TQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPG----FDPKALPTV 381
T G+RIKT RG V+ + + + M+ + + Y D P+A+P
Sbjct: 296 TDRGIRIKTNRARGGGVENVRISNIYMEDVLCPLAINAFYKHGIDESNPLLTSPEAVPVT 355
Query: 382 TG------INYRDMVADNVTQSAK-LDGIRNDPFTGICISNVTIKLTEKPKE 426
G I D+ A N +A + G+ P + + +VT ++T P E
Sbjct: 356 EGTPVIRHIQISDVTAKNARAAAGFIYGLPEMPIEDVALRHVTFEMTLDPAE 407
>gi|160880868|ref|YP_001559836.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160429534|gb|ABX43097.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 518
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 192/403 (47%), Gaps = 39/403 (9%)
Query: 46 EFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGS 105
EF LN + +FG GDG +T AI++ K ++++P G + +
Sbjct: 78 EFVTLNVK-------EFGAKGDGVHDDTTMIQCAINSCPK-----NGRVLIPEGCYKIST 125
Query: 106 FNLTSHFTLYIHKDALLLASQDESEWPLLP-------PLPSYGRGRDE--PGGRFSSLIF 156
L S L + + A+L A D S++P+LP Y G E P F+ +I
Sbjct: 126 LFLKSDLRLELGRGAVLSAFTDRSKFPILPGRIESFDETEEYNLGSWEGNPLDSFAGIIT 185
Query: 157 GTNLTDVVVTGGNATINGQGEP--WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDS 214
G N+++V +TG TI+G + WW + + RP LI + +N+ + +T+ +S
Sbjct: 186 GINVSNVEITG-EGTIDGCADETNWWNNPKVRNI-AWRPRLIFLNHCNNITVQGITVKNS 243
Query: 215 PSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGW 274
P WN+HP +S ++ LTI P DSPNTDG++P+SC N I Y GDDC+A+KSG
Sbjct: 244 PCWNIHPYFSDDLKFVDLTILNPKDSPNTDGLDPESCKNVLIVGVYFSLGDDCIAIKSGK 303
Query: 275 DEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKT 334
G K P+++L IR+ C+ +I +GSEM+GG+K++ + I+T G+RIKT
Sbjct: 304 IYMGAKHKRPSENLEIRQC-CMRDGHGSITIGSEMAGGVKNLTVRECLFIHTDRGLRIKT 362
Query: 335 AVGRG--AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPD----------PGFDPKALPTVT 382
GRG A + + + M + + Y PD P P +
Sbjct: 363 RRGRGKDAIIDGVLFENIRMDHVMTPVVINCFYFCDPDGHSEYVQSKNPYEVDDRTPHIG 422
Query: 383 GINYRDMVADNVTQSAK-LDGIRNDPFTGICISNVTIKLTEKP 424
+ +R++ N +A + G+ I NV I E P
Sbjct: 423 ELTFRNLDCTNCHAAASYMYGLPEQKIEKITFENVNISFAENP 465
>gi|390453172|ref|ZP_10238700.1| polygalacturonase [Paenibacillus peoriae KCTC 3763]
Length = 453
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 120/381 (31%), Positives = 193/381 (50%), Gaps = 33/381 (8%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ D+G DG T T+A AI S GG +++P G + TG+ L S+ L++
Sbjct: 6 IVDYGAPQDGTTPATEAIANAIEAASNA---GGGTVVIPSGTYFTGAIFLKSNIELHVSP 62
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGR--FSSLIFGTNLTDVVVTGGNATINGQG 176
A+L S + +++P++ R E R +S I+G NL ++ VTG + + G G
Sbjct: 63 GAILSFSTNPADYPVV-------ESRWEGVQREVHASCIYGQNLENISVTG-SGILEGNG 114
Query: 177 EPWWIKYRK--KQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTI 234
+PWW K+R + RP LI V I ++ L +SPSW V+P+ NV I L+I
Sbjct: 115 QPWWEKHRNHPEDLQYPRPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNLSI 174
Query: 235 RAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLI 294
P DSPNTDGINP+SC+N RI + I GDDC+A+K+G ++ ++ +++ I
Sbjct: 175 LNPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTEDTQERIA--CENITITNCT 232
Query: 295 CISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKT 354
+ + LGSEMSG I++V + T G+R+K+ GRG +++I V + M+
Sbjct: 233 MVH-GHGGVVLGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGIIEDIRVSNIVMEE 291
Query: 355 -----MKYVFWMTGDYG-------SHPDPGFDPKALPTVTGINYRDMVADNVTQSAK-LD 401
+ +++ G G +P P D P+ I++ D+ A V +A L
Sbjct: 292 VICPFILNLYYFCGPRGKDKYVWDKNPYPVTD--ETPSFRRIHFSDITARQVHAAAGFLY 349
Query: 402 GIRNDPFTGICISNVTIKLTE 422
G+ I SN+ I + +
Sbjct: 350 GLAEQYIAEITFSNIDISMAK 370
>gi|150388731|ref|YP_001318780.1| glycoside hydrolase [Alkaliphilus metalliredigens QYMF]
gi|149948593|gb|ABR47121.1| glycoside hydrolase, family 28 [Alkaliphilus metalliredigens QYMF]
Length = 519
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 117/367 (31%), Positives = 177/367 (48%), Gaps = 41/367 (11%)
Query: 33 VAECRPTKNSYTIEFQALNCRKHSAV-------------LTDFGGVGDGKTSNTKAFNTA 79
++E P+ Y I + HS V + DFG G G+ +T + A
Sbjct: 48 ISELEPS-TEYEIYIKDTQTLSHSGVKVFKTEYESVTLNVKDFGATGTGEKHDTASLQAA 106
Query: 80 ISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPS 139
I + ++++P G +LT L S+ TL I K A LL S ++P+LP
Sbjct: 107 I-----MSCPPSGRVLIPEGTYLTAPLYLKSNITLEIQKGAKLLGSNVREDYPILPGTTK 161
Query: 140 YGRGRDE---------PGGRFSSLIFGTNLTDVVVTG-----GNATINGQGEPWWIKYRK 185
G+DE P F+SL+ G + +V + G GNA+ + WW +K
Sbjct: 162 TTDGKDEFYLGSWEGDPMDCFASLLTGIGVNNVKIIGKGIIDGNASFDN----WWKDAKK 217
Query: 186 KQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
K+ RP LI + ++ I +T+ +SPSW +HP++S N+ + L + P DSPNTDG
Sbjct: 218 KRV-AWRPRLIFIKNCRDILIEEVTVQNSPSWTIHPMFSQNLQLINLKVINPKDSPNTDG 276
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
INP+SC N +I GDDC+A+KSG G ++ + +Q ++IR + I +
Sbjct: 277 INPESCQNVKIIGVDFSVGDDCIAIKSGKLYLGQRLKIASQDIMIRNC-HMKFGHGGIVI 335
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG--AYVKEIYVRRMTMKTMKYVFWMTG 363
GSEM+GG+K+V A T G+RIKT GRG + I + MK + F +
Sbjct: 336 GSEMAGGVKNVSAIRCIFEETDRGIRIKTRRGRGKDGVINGINAENIVMKKVLTPFVINT 395
Query: 364 DYGSHPD 370
Y PD
Sbjct: 396 FYFCDPD 402
>gi|325103049|ref|YP_004272703.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324971897|gb|ADY50881.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 526
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 189/381 (49%), Gaps = 45/381 (11%)
Query: 90 GGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGG 149
GG + P GK+LTG +L S+ T++I A L S + + LP +PS G +
Sbjct: 57 GGGTVYFPAGKYLTGPIHLKSNITIFIDAGAELHFSDNFDHY--LPMVPSRWEGTEVI-- 112
Query: 150 RFSSLIFGTNLTDVVVTGGNATINGQGEPWW----IKYRK--------KQFN-------- 189
FS L + ++ ++ + G I+G G+ WW ++ +K K+F
Sbjct: 113 NFSPLFYAKDVENIAIVG-RGLIDGHGKNWWRFSEVEVKKLTEDSKWQKEFKRLNPNVLA 171
Query: 190 ----------VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPID 239
RP I+ M NVQI ++ + +SP W ++P Y NV + G+TI P
Sbjct: 172 PDLPGWIERGFLRPPFIQFMNCKNVQIKDIKIQNSPFWTINPQYCDNVTVDGITIDNP-P 230
Query: 240 SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPD 299
SPNTDGINP+SC N RI + +I GDDC+ +KSG D G KV +P ++ I +
Sbjct: 231 SPNTDGINPESCRNVRIANCHISVGDDCITIKSGKDRSGRKVNIPAENYTITNCTMLR-G 289
Query: 300 SAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVF 359
+ +GSEMSGG+K++ + T G+RIK+A GRG V++I V + M+ ++
Sbjct: 290 HGGVVIGSEMSGGVKNIAITNCIFDGTDRGIRIKSARGRGGVVEDIRVSNIIMRNIRDQA 349
Query: 360 WMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
+ + +P + P I+ D+ A + ++ L+G+ P + I +NV +
Sbjct: 350 IVLDLQYAKTNPEPISERTPIFRNIHISDITA-STNRAGYLNGLEELPISNISFNNVNMT 408
Query: 420 -----LTEKPKELQWNCTNIQ 435
L + K++ +N N+Q
Sbjct: 409 ANTGFLIKNSKDISFN--NVQ 427
>gi|358066336|ref|ZP_09152863.1| hypothetical protein HMPREF9473_04926 [Clostridium hathewayi
WAL-18680]
gi|356695387|gb|EHI57019.1| hypothetical protein HMPREF9473_04926 [Clostridium hathewayi
WAL-18680]
Length = 539
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 116/343 (33%), Positives = 174/343 (50%), Gaps = 36/343 (10%)
Query: 46 EFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGS 105
EF LN R DFG GDG +T AI K +++VP G + S
Sbjct: 98 EFVTLNVR-------DFGAKGDGVQDDTGFIQAAIMCCPK-----NGRVLVPEGIYRVSS 145
Query: 106 FNLTSHFTLYIHKDALLLASQDESEWPLLPPL-PSY--------GRGRDEPGGRFSSLIF 156
L L I K A+L A D +++P+L L SY G P FS++I
Sbjct: 146 LFLKDDLRLEIGKGAVLSAFTDRTKFPVLKGLIDSYDEKEEYNLGSWEGNPLDMFSAIIT 205
Query: 157 GTNLTDVVVTG-----GNATINGQGEPWWI--KYRKKQFNVTRPYLIEVMFSDNVQISNL 209
G N+ +VV+ G GNA + + WW K R+ F RP +I + ++V + +
Sbjct: 206 GINVKNVVLYGQGLIEGNAGY--EEDNWWYNAKVRRIAF---RPRMIFLNHCEHVVVQGI 260
Query: 210 TLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVA 269
+ +SPSWN+HP +S+++ LT+ P DSPNTDG++P+SC + I Y GDDC+A
Sbjct: 261 RVQNSPSWNIHPYFSNHLRFLDLTVLNPKDSPNTDGLDPESCKDVEIAGVYFSLGDDCIA 320
Query: 270 VKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSG 329
+KSG G K +P++ ++IR+ C+ +I +GSEM+GG+K + +D ++T G
Sbjct: 321 IKSGKIYMGAKYRVPSEDIVIRQC-CMRDGHGSITIGSEMAGGVKHLTVKDCLFLHTDRG 379
Query: 330 VRIKTAVGRG--AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPD 370
+RIKT GRG A + I + M + F + Y PD
Sbjct: 380 LRIKTRRGRGEAAVIDGILFEHIRMDHVMTPFVINCFYYCDPD 422
>gi|431050714|ref|ZP_19493383.1| polygalacturonase [Enterococcus faecium E1590]
gi|431764029|ref|ZP_19552575.1| polygalacturonase [Enterococcus faecium E3548]
gi|430560252|gb|ELA99556.1| polygalacturonase [Enterococcus faecium E1590]
gi|430621333|gb|ELB58100.1| polygalacturonase [Enterococcus faecium E3548]
Length = 445
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 185/365 (50%), Gaps = 27/365 (7%)
Query: 72 NTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEW 131
NT+A AI A+ GG ++VP G++LTG+ L S+ L++ A+L S D ++
Sbjct: 15 NTEAIQKAID---AAASAGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDY 71
Query: 132 PLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVT 191
P++ + R ++S I+ N+ ++ VTG T++G G+ WW +R + N+
Sbjct: 72 PIV-----HSRWEGVHRKVYASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLA 125
Query: 192 --RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPD 249
RP L+ + + ++ LI SPSW ++P+ SN LTI P DSPNTDGI+P+
Sbjct: 126 YPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPE 185
Query: 250 SCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEM 309
SC N RI + +I GDDC+A+K+G ++ ++ +++ I + + LGSEM
Sbjct: 186 SCKNVRISNCHIDVGDDCIAIKAGTEDTYERIA--CENITITNCTMVH-GHGGVVLGSEM 242
Query: 310 SGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHP 369
SG I+++ + T G+R+K+ GRG V++I V + M + F + Y P
Sbjct: 243 SGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP 302
Query: 370 DPGFDP-----------KALPTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNVT 417
G +P + P I++ ++ A NV SA + G+ I N+
Sbjct: 303 R-GKEPYVWEKTAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNID 361
Query: 418 IKLTE 422
+ + +
Sbjct: 362 VSMAQ 366
>gi|160880699|ref|YP_001559667.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160429365|gb|ABX42928.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 474
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 198/440 (45%), Gaps = 74/440 (16%)
Query: 42 SYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKW 101
++T+E R+ S +TD+ V G SNT A N AI+ LSK GG + VP G W
Sbjct: 3 TFTVELPVFPDRQVS--ITDYKAVSGGIESNTAAINQAITELSKL---GGGTVNVPEGIW 57
Query: 102 LTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLT 161
LTG L S+ L++ K AL+ ++ E+P++ L +Y +P R S I +
Sbjct: 58 LTGPITLKSNINLHLEKGALITFDKNPEEYPII--LTNY---EGQPRLRAVSPIHAFDEE 112
Query: 162 DVVVTGGNATINGQGEPWW----IKYRKKQ------------------------------ 187
++ +T G I+G G W K KKQ
Sbjct: 113 NIAIT-GEGVIDGNGHEWRPLKEFKVTKKQWQARLKKSPYVIDTKEGGIWYPSKTSYEGC 171
Query: 188 -------------------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
+++ RP + ++ + + I +TL +SP+WN+HP+ +N+
Sbjct: 172 LEGEVSVEDPDALKKAAPNYDLYRPVMTNLVRCNKILIEGVTLQNSPAWNLHPLLCTNLT 231
Query: 229 IQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHL 288
++ IR + N DG++ +SC I GDD + +KSG + G K+ +PT+H+
Sbjct: 232 LRNAFIRNANFAQNGDGLDLESCRFVDIYGVKFDVGDDAICIKSGKNAIGRKITVPTEHV 291
Query: 289 IIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVR 348
IR + + +GSEMS G++DV E+ + T +G+R K+A+GRG V++I +R
Sbjct: 292 RIRDCV-VYHGHGGFVIGSEMSRGVRDVVIENCLFLGTDTGIRFKSAIGRGGVVEDITIR 350
Query: 349 RMTMK---------TMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAK 399
+ M TM Y + S + +P I RD+ Q+ K
Sbjct: 351 NIQMTDIEEDAIIFTMGYTLFRLDHQASDEPDTISKEDIPEFKNITIRDVNCLRAGQAIK 410
Query: 400 LDGIRNDPFTGICISNVTIK 419
+DG+ P I + NV I+
Sbjct: 411 IDGLEQMPIHDIILENVMIQ 430
>gi|390933294|ref|YP_006390799.1| glycoside hydrolase family protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389568795|gb|AFK85200.1| glycoside hydrolase family 28 [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 518
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 169/324 (52%), Gaps = 20/324 (6%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG VGDGK +T + +AI A G ++ P G +LT L S+ T+ + K
Sbjct: 86 VKDFGAVGDGKRIDTFSIQSAI-----MACPDGGRVYFPEGVYLTYPIFLKSNITIELGK 140
Query: 119 DALLLASQDESEWPLLPPL-------PSY-GRGRDEPGGRFSSLIFGTNLTDVVVTGGNA 170
A+LL +++ +P+LP SY G E F+SLI G ++ +V + G +
Sbjct: 141 GAVLLGAKEREMYPILPGEIDSQEFSNSYLGSWEGEANDMFASLITGISVENVNIIG-DG 199
Query: 171 TINGQG--EPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
I+G + WW + K+ RP + + NV I +T+ +SPSW +HP+ S N+
Sbjct: 200 VIDGNSSFDTWWYDAKVKRI-AWRPRTVYLNKCKNVLIEGITIRNSPSWTIHPLMSQNLK 258
Query: 229 IQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHL 288
L I P D+PNTDG++P+SC + I GDDC+A+KSG K+ MP+++L
Sbjct: 259 FINLNIENPKDAPNTDGLDPESCKDVLIAGTRFSVGDDCIAIKSGKLSVSQKLPMPSENL 318
Query: 289 IIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG--AYVKEIY 346
IR + + A+ +GSEMSGG+K+V E+ T G+RIKT GRG + EI+
Sbjct: 319 YIRNCL-MEYGHGAVVIGSEMSGGVKNVHVENCVFKKTDRGIRIKTRRGRGKTGIIDEIH 377
Query: 347 VRRMTMKTMKYVFWMTGDYGSHPD 370
+ M+ + F + Y D
Sbjct: 378 AANIKMEGVLTPFTINSFYFCDAD 401
>gi|345013580|ref|YP_004815934.1| glycoside hydrolase [Streptomyces violaceusniger Tu 4113]
gi|344039929|gb|AEM85654.1| glycoside hydrolase family 28 [Streptomyces violaceusniger Tu 4113]
Length = 484
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 126/419 (30%), Positives = 208/419 (49%), Gaps = 58/419 (13%)
Query: 54 KHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFT 113
+ S +TD+G VGDG+T NT AF I+ + GG Q++VP G++LTG+ +L S
Sbjct: 65 RRSFRITDYGAVGDGRTMNTAAFRATIAACHRA---GGGQVVVPEGRFLTGAIHLRSRVN 121
Query: 114 LYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATIN 173
L++ A + S D ++ LP + + G + +S I+ DV VT G T++
Sbjct: 122 LHVTAGATIAFSPDPRDF--LPVVLTRWEGTE--CYNYSPFIYAYGARDVAVT-GPGTLD 176
Query: 174 GQGE--PWWIKYR-----------------------KKQF---NVTRPYLIEVMFSDNVQ 205
GQ PW YR ++ F + RP +++ NV
Sbjct: 177 GQARLGPWESWYRDSGPQGADQKLLREMGSTGAPVARRVFGDGHCLRPKMVQFYRCRNVL 236
Query: 206 ISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGD 265
+S+LT++D P W VHPV SSNV ++G+T+ + + NTDG +P+ C++ I + D
Sbjct: 237 VSDLTIVDPPMWTVHPVLSSNVTVRGVTVDSTLY--NTDGCDPECCSDVLITGCRFNTND 294
Query: 266 DCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN 325
DCVAVKSG DE G +VG+P++++++R S + +GSEMSGG++D+ AE+ IN
Sbjct: 295 DCVAVKSGRDEDGHRVGVPSRNIVVRDCQ-FSGRWGGMTVGSEMSGGVRDIFAENC-EIN 352
Query: 326 ---------TQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDPGFDP 375
+ + +K RG ++ +++R T + ++ + ++T Y G +
Sbjct: 353 PPDFPGRYPVKHALYVKANKKRGGFIDGVHIRNFTGQDVERDIAFVTMAYN-----GGED 407
Query: 376 KALP-TVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTN 433
LP +V I+ M D +L G+ D G+ +S T P + CT+
Sbjct: 408 GTLPVSVRNIHMDRMAIDGAQTVLRLVGLDTDHLRGVRLSRSTFTGILNPDSIA--CTD 464
>gi|430854295|ref|ZP_19472011.1| polygalacturonase [Enterococcus faecium E1258]
gi|430539024|gb|ELA79287.1| polygalacturonase [Enterococcus faecium E1258]
Length = 445
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 181/349 (51%), Gaps = 24/349 (6%)
Query: 88 ADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEP 147
+DGG ++VP G++LTG+ L S+ L++ A+L S D ++P++ + R
Sbjct: 28 SDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVH 82
Query: 148 GGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVT--RPYLIEVMFSDNVQ 205
++S I+ N+ ++ VTG T++G G+ WW +R + N+ RP L+ +
Sbjct: 83 RKVYASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNESDNLAYPRPKLMSFHNCHRIT 141
Query: 206 ISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGD 265
+ ++ LI SPSW ++P+ SN LTI P DSPNTDGI+P+SC N RI + +I GD
Sbjct: 142 VKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGD 201
Query: 266 DCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN 325
DC+A+K+G ++ ++ +++ I + + LGSEMSG I+++ +
Sbjct: 202 DCIAIKAGTEDTYERIA--CENITITNCTMVH-GHGGVVLGSEMSGSIRNITISNCIFQE 258
Query: 326 TQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-----YVFWMTGDYGSHPDPGFDPKAL-- 378
T G+R+K+ GRG V++I V + M + +++ G G P ++ KA
Sbjct: 259 TDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYV-WEKKAYPI 317
Query: 379 ----PTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNVTIKLTE 422
P I++ ++ A NV SA + G+ I N+ + + +
Sbjct: 318 DERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQ 366
>gi|448419310|ref|ZP_21580352.1| exo-poly-alpha-D-galacturonosidase precursor [Halosarcina pallida
JCM 14848]
gi|445675300|gb|ELZ27833.1| exo-poly-alpha-D-galacturonosidase precursor [Halosarcina pallida
JCM 14848]
Length = 541
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 191/386 (49%), Gaps = 41/386 (10%)
Query: 64 GVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLL 123
G+ D + +T+A A+ + A G ++ +P G +L+ + TL + A L
Sbjct: 35 GIEDDDSLDTEAIQAALDD----CAGEGGEVYLPSGTYLSAPLRVGDDTTLRVANGAELR 90
Query: 124 ASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW--- 180
D E+P + S G ++ G F ++ + +V +TG ++G G WW
Sbjct: 91 FVGDFREFPTVE---SRWEGWNQDG--FHPCLYVADAENVTITG-EGVVDGGGSHWWDLV 144
Query: 181 -----------------IKYRKKQFNVT----RPYLIEVMFSDNVQISNLTLIDSPSWNV 219
I+ +Q +V+ RP L+++ +NV +S +TL +SP WN
Sbjct: 145 ETPEAEFPDDLKERLAEIRSGHRQDDVSTFTVRPPLLQIHECENVTVSGVTLRNSPFWNT 204
Query: 220 HPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGI 279
H VYS +V I ++IR P D+PN DGI+ DS R+ D +I +GDD + +KSG DE G
Sbjct: 205 HVVYSEDVTIHDVSIRNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEEGR 264
Query: 280 KVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG 339
+VG PT+++++ + + +GSE +G ++ V + T +T G+RIK+ GRG
Sbjct: 265 EVGRPTENVVVTNC-TVEHGHGGVVVGSETAGDVRHVTVTNCTFTDTDRGIRIKSKRGRG 323
Query: 340 AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPK----ALPTVTGINYRDMVADNVT 395
V+++ + M+ + F + G Y + D DPK A P V +N+ + A+ V
Sbjct: 324 GTVEDLRFDTIVMRRVACPFVLNGYYQTDIDS--DPKPVDEATPNVRNVNFHHITAEEVE 381
Query: 396 QSAKLDGIRNDPFTGICISNVTIKLT 421
+A L G+ F GI ++V I T
Sbjct: 382 SAAFLAGLPERRFEGISFTDVDIDAT 407
>gi|423299813|ref|ZP_17277838.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
gi|408473622|gb|EKJ92144.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
Length = 450
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/425 (28%), Positives = 195/425 (45%), Gaps = 57/425 (13%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R + G +GK NTK N+ I L++ GG L P G +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKALNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 76
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL + A LL S + ++ LP + G F LI+ + ++ + G T+
Sbjct: 77 TLELEAGATLLFSDNFDDY--LPFVEVRHEGVMMKS--FQPLIYAVDAENITIKG-EGTL 131
Query: 173 NGQGEPWWIKYRKKQFNVT----------------------------------------R 192
+GQG+ WW+++ + ++ R
Sbjct: 132 DGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAANDTTAIYAETNKDYVSTLQRRFFR 191
Query: 193 PYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCT 252
P I+ + ++I + +++SP W V+P + NV I+G+TI + SPNTDGINP+SC
Sbjct: 192 PPFIQPIRCKEIKIEGVKIVNSPFWTVNPEFCDNVTIKGITIDN-VPSPNTDGINPESCR 250
Query: 253 NTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGG 312
N I D +I GDDC+ +KSG D ++G+P +++ I +S + +GSEMSG
Sbjct: 251 NVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS-GHGGVVIGSEMSGS 309
Query: 313 IKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDP 371
++ V + T G+RIK+ GRG V++I V + M +K + Y P
Sbjct: 310 VRKVTISNCIFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIKREAVVLNLKYSKMPA- 368
Query: 372 GFDPKA--LPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQW 429
+PK+ P ++ M +V K+ G+ P + I + ++ I+ K K +
Sbjct: 369 --EPKSERTPIFRNVHISGMTVTDVKTPIKIVGLEEAPISDIVLRDIHIQ-GGKQKCIFE 425
Query: 430 NCTNI 434
NC I
Sbjct: 426 NCERI 430
>gi|395212459|ref|ZP_10399800.1| glycoside hydrolase [Pontibacter sp. BAB1700]
gi|394457168|gb|EJF11353.1| glycoside hydrolase [Pontibacter sp. BAB1700]
Length = 582
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 175/354 (49%), Gaps = 70/354 (19%)
Query: 55 HSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTL 114
+S +TDFG V DG T +T AF AI+++ A GG ++IVP G WLTG L S+ L
Sbjct: 72 YSVSITDFGAVSDGLTKSTAAFEKAIADV---VAKGGGKVIVPRGMWLTGPIVLKSNINL 128
Query: 115 YIHKDALLLASQDESEWPLLPP----LPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNA 170
++ AL+L S+D ++PL+ L ++ R S I G +L +V +TG
Sbjct: 129 HVEDGALVLFSKDFDDYPLVKTSFEGLNTF---------RCQSPISGRDLENVAITG-KG 178
Query: 171 TINGQGEPW------------W---------------IKY-------------------- 183
I+G G+ W W I Y
Sbjct: 179 VIDGNGDAWRPVKKGKMTESQWKTLLKSGGVLSDDGKIWYPTESSKRGAVTGNFNVPLDL 238
Query: 184 -RKKQF----NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
K+QF + RP ++ ++ V + T +SP+WN+HP+ +V I+ LT+R P
Sbjct: 239 TEKEQFEPIKDFMRPVMVSLINCKKVLLDGPTFQNSPAWNIHPLMCEDVTIRNLTVRNPW 298
Query: 239 DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISP 298
S N DG++ +SC N+ I +N GDD + +KSG D++G G+PT+++I++ + +
Sbjct: 299 YSQNGDGLDLESCKNSVIYNNTFDVGDDAICIKSGKDQHGRDRGIPTENVIVKNNV-VYH 357
Query: 299 DSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+GSEMS G+K+V + T I T G+R K+ GRG V+ IY+ + M
Sbjct: 358 GHGGFVVGSEMSSGVKNVHVSNCTFIGTDIGLRFKSTRGRGGVVENIYISNIDM 411
>gi|448581096|ref|ZP_21645086.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax gibbonsii
ATCC 33959]
gi|445733858|gb|ELZ85418.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax gibbonsii
ATCC 33959]
Length = 512
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 192/384 (50%), Gaps = 37/384 (9%)
Query: 64 GVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLL 123
G+ D + +T A A+ + A +GG ++ +PPG + + + T + A L
Sbjct: 12 GIDDDDSLDTAAIQAALDDC---AGEGG-EVYLPPGTYRSAPLRVGDDTTFRLANGAELR 67
Query: 124 ASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW--- 180
QD +E+P + S G D+ G F + + ++V +TG I+G G WW
Sbjct: 68 FVQDFTEFPTVE---SRWEGWDQDG--FHPCLHVADASNVTITG-EGVIDGGGSYWWEFV 121
Query: 181 -----------------IKYRKKQFNVT----RPYLIEVMFSDNVQISNLTLIDSPSWNV 219
I+ +Q V+ RP L+++ +NV +S +TL +SP WN
Sbjct: 122 SLPPEEYPAELAERLEEIRRGNQQDEVSTFTVRPPLLQIDGCENVTVSGVTLRNSPFWNT 181
Query: 220 HPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGI 279
H VYS +V I ++I+ P D+PN DGI+ DS R+ D +I +GDD + +KSG DE G
Sbjct: 182 HVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEQGR 241
Query: 280 KVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG 339
+VG PT+++++ + + +GSE +G ++ V + T +T G+RIK+ GRG
Sbjct: 242 EVGRPTENVVVTNC-TVEHGHGGVVIGSETAGDVRHVTVTNCTFTDTDRGIRIKSKRGRG 300
Query: 340 AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDP--KALPTVTGINYRDMVADNVTQS 397
V+++ + M+ + F + G Y + D +P +A P V +++ + A+ V +
Sbjct: 301 GTVEDLRFDTIVMRRVACPFVINGYYQTDIDSEPEPVTEATPNVRNVDFHHITAEEVESA 360
Query: 398 AKLDGIRNDPFTGICISNVTIKLT 421
A L G+ F GI ++V I T
Sbjct: 361 AFLAGLPEQRFEGISFTDVDIDAT 384
>gi|393781486|ref|ZP_10369681.1| hypothetical protein HMPREF1071_00549 [Bacteroides salyersiae
CL02T12C01]
gi|392676549|gb|EIY69981.1| hypothetical protein HMPREF1071_00549 [Bacteroides salyersiae
CL02T12C01]
Length = 501
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 180/381 (47%), Gaps = 52/381 (13%)
Query: 83 LSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGR 142
+ + AA+GG + P G +LT + + S+ TL I A L S ++ LP +
Sbjct: 48 IDEAAAEGGGTIYFPAGTYLTATIRMKSNITLDIESGATLRFSDRFEDY--LPFVKIRWE 105
Query: 143 GRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW---IKYRK-------------- 185
G S LI+ N ++ +TG T++G G WW + R+
Sbjct: 106 G--TVMNTLSPLIYADNADNLTITG-RGTLDGNGFKWWAWEVDTRRLIKENGGKLPSLNK 162
Query: 186 ---------KQFNVT------------RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYS 224
K ++ RP I+ +N+ I N+ +I+SP W ++P +
Sbjct: 163 LQQMWVDANKDLEISDYYKPSLERRMFRPPFIQFFECNNIVIENVKIINSPFWTINPAFC 222
Query: 225 SNVLIQGLTIRAPIDSP---NTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKV 281
N+ + G+TI P +P NTDGINP SC+N RI D +I GDDC+ +KSG D G K
Sbjct: 223 DNITVHGVTINNPSKNPKGPNTDGINPTSCSNVRISDCFISVGDDCITIKSGRDADGRKY 282
Query: 282 GMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAY 341
G P Q+L I I +S + +GSEMSGG+K V + T +G+R+K + GRG
Sbjct: 283 GKPCQNLTITNCIMLS-GHGGVVIGSEMSGGVKRVAISNCVFDGTDAGIRLKASRGRGGV 341
Query: 342 VKEIYVRRMTMKTM---KYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSA 398
V++I V + MK + ++F + D S P+P + P I+ ++ +V Q
Sbjct: 342 VEDIRVDNIVMKNIGRNAFIFDLFYDKLSKPEPV--SERTPVFRNIHLSNITGSDVKQIG 399
Query: 399 KLDGIRNDPFTGICISNVTIK 419
+ GI P + SN+ ++
Sbjct: 400 YIKGIEEMPINELSFSNINME 420
>gi|419720997|ref|ZP_14248200.1| pectate lyase family protein [Lachnoanaerobaculum saburreum F0468]
gi|383302819|gb|EIC94301.1| pectate lyase family protein [Lachnoanaerobaculum saburreum F0468]
Length = 526
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 128/406 (31%), Positives = 193/406 (47%), Gaps = 38/406 (9%)
Query: 39 TKNSYT-IEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVP 97
TK+ +T EF LN + DFG +GDG ++ AI+ K DG + +P
Sbjct: 71 TKSFHTGYEFVLLNVK-------DFGALGDGSGLDSGYIQAAINACPK---DG--TVYIP 118
Query: 98 PGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDE---------PG 148
GK+L L S+ ++I KDA+L+ +D ++P+LP + + E P
Sbjct: 119 KGKYLCTPVFLKSNIDIWIDKDAILIGEKDRKKYPILPGMIESSDEKKEYNIGSWEGNPL 178
Query: 149 GRFSSLIFGTNLTDVVVTG-GNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQIS 207
F++LI G ++ +V + G G N WW +KK RP + + N+ +
Sbjct: 179 DCFAALITGISVENVHIYGEGILDGNASMLDWWKDAKKKNI-AWRPNTVFLHNCKNIAMQ 237
Query: 208 NLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDC 267
L +++SPSW VHP YS N+L TI P +SPNTDG++P+SC N I I GDDC
Sbjct: 238 GLCIMNSPSWTVHPYYSDNLLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDC 297
Query: 268 VAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQ 327
VA+KSG +K P ++++IR I ++ +GSE++ G+ DV E T
Sbjct: 298 VAIKSGKYYMALKHYKPAKNIVIRNSI-FRKGHGSVTIGSEVAAGVYDVSVEKCIFEGTD 356
Query: 328 SGVRIKTAVGRG--AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFD----------P 375
G+RIKT GRG + + I + MK + F Y PD D
Sbjct: 357 RGLRIKTRRGRGEKSVLDNICFENILMKDVCMPFTANMFYFCDPDGHSDYVQNQDKMEVN 416
Query: 376 KALPTVTGINYRDMVADNVTQ-SAKLDGIRNDPFTGICISNVTIKL 420
+ P + I RD+ +NV A L G+ P I + N+T+
Sbjct: 417 EKTPKIGKIAARDIRCENVKNIFACLYGLPEMPVEEIVLENITLNF 462
>gi|69244135|ref|ZP_00602671.1| Galacturan 1,4-alpha-galacturonidase [Enterococcus faecium DO]
gi|257880495|ref|ZP_05660148.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,230,933]
gi|257886384|ref|ZP_05666037.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,501]
gi|257891474|ref|ZP_05671127.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,410]
gi|257894583|ref|ZP_05674236.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,408]
gi|260562495|ref|ZP_05833005.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium C68]
gi|293559894|ref|ZP_06676406.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1162]
gi|293568212|ref|ZP_06679546.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1071]
gi|314938527|ref|ZP_07845812.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|314942455|ref|ZP_07849295.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|314949488|ref|ZP_07852823.1| polygalacturonase [Enterococcus faecium TX0082]
gi|314952932|ref|ZP_07855899.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|314992201|ref|ZP_07857644.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|314995242|ref|ZP_07860354.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|383329854|ref|YP_005355738.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|389869663|ref|YP_006377086.1| pectin lyase [Enterococcus faecium DO]
gi|406581497|ref|ZP_11056639.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|406583788|ref|ZP_11058833.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|406586132|ref|ZP_11061069.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|406591696|ref|ZP_11065942.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410936309|ref|ZP_11368176.1| pectin lyase [Enterococcus sp. GMD5E]
gi|415891706|ref|ZP_11549795.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4453]
gi|416141642|ref|ZP_11599435.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4452]
gi|424845976|ref|ZP_18270576.1| polygalacturonase [Enterococcus faecium R501]
gi|424854976|ref|ZP_18279307.1| polygalacturonase [Enterococcus faecium R499]
gi|424960548|ref|ZP_18375053.1| polygalacturonase [Enterococcus faecium P1986]
gi|424964739|ref|ZP_18378806.1| polygalacturonase [Enterococcus faecium P1190]
gi|424971119|ref|ZP_18384580.1| polygalacturonase [Enterococcus faecium P1139]
gi|424974622|ref|ZP_18387847.1| polygalacturonase [Enterococcus faecium P1137]
gi|424978117|ref|ZP_18391065.1| polygalacturonase [Enterococcus faecium P1123]
gi|424981120|ref|ZP_18393872.1| polygalacturonase [Enterococcus faecium ERV99]
gi|424983707|ref|ZP_18396282.1| polygalacturonase [Enterococcus faecium ERV69]
gi|424987493|ref|ZP_18399867.1| polygalacturonase [Enterococcus faecium ERV38]
gi|424990935|ref|ZP_18403122.1| polygalacturonase [Enterococcus faecium ERV26]
gi|425007173|ref|ZP_18418318.1| polygalacturonase [Enterococcus faecium ERV1]
gi|425014684|ref|ZP_18425349.1| polygalacturonase [Enterococcus faecium E417]
gi|425021605|ref|ZP_18431844.1| polygalacturonase [Enterococcus faecium C497]
gi|425023089|ref|ZP_18433228.1| polygalacturonase [Enterococcus faecium C1904]
gi|425034680|ref|ZP_18439557.1| polygalacturonase [Enterococcus faecium 514]
gi|425042053|ref|ZP_18446419.1| polygalacturonase [Enterococcus faecium 511]
gi|425046647|ref|ZP_18450644.1| polygalacturonase [Enterococcus faecium 510]
gi|425047911|ref|ZP_18451842.1| polygalacturonase [Enterococcus faecium 509]
gi|425051834|ref|ZP_18455475.1| polygalacturonase [Enterococcus faecium 506]
gi|427397520|ref|ZP_18890002.1| hypothetical protein HMPREF9307_02178 [Enterococcus durans
FB129-CNAB-4]
gi|430824500|ref|ZP_19443057.1| polygalacturonase [Enterococcus faecium E0120]
gi|430832640|ref|ZP_19450680.1| polygalacturonase [Enterococcus faecium E0333]
gi|430845579|ref|ZP_19463463.1| polygalacturonase [Enterococcus faecium E1050]
gi|430848400|ref|ZP_19466219.1| polygalacturonase [Enterococcus faecium E1133]
gi|430856194|ref|ZP_19473897.1| polygalacturonase [Enterococcus faecium E1392]
gi|430868562|ref|ZP_19482856.1| polygalacturonase [Enterococcus faecium E1574]
gi|430968703|ref|ZP_19487864.1| polygalacturonase [Enterococcus faecium E1576]
gi|431017544|ref|ZP_19490421.1| polygalacturonase [Enterococcus faecium E1578]
gi|431243672|ref|ZP_19503845.1| polygalacturonase [Enterococcus faecium E1622]
gi|431261230|ref|ZP_19505727.1| polygalacturonase [Enterococcus faecium E1623]
gi|431323325|ref|ZP_19509129.1| polygalacturonase [Enterococcus faecium E1626]
gi|431388088|ref|ZP_19511694.1| polygalacturonase [Enterococcus faecium E1627]
gi|431520927|ref|ZP_19516641.1| polygalacturonase [Enterococcus faecium E1634]
gi|431565473|ref|ZP_19519835.1| polygalacturonase [Enterococcus faecium E1731]
gi|431744393|ref|ZP_19533261.1| polygalacturonase [Enterococcus faecium E2071]
gi|431747806|ref|ZP_19536575.1| polygalacturonase [Enterococcus faecium E2134]
gi|431750363|ref|ZP_19539082.1| polygalacturonase [Enterococcus faecium E2297]
gi|431755429|ref|ZP_19544078.1| polygalacturonase [Enterococcus faecium E2883]
gi|431769096|ref|ZP_19557524.1| polygalacturonase [Enterococcus faecium E1321]
gi|431771659|ref|ZP_19560039.1| polygalacturonase [Enterococcus faecium E1644]
gi|431774529|ref|ZP_19562836.1| polygalacturonase [Enterococcus faecium E2369]
gi|431780636|ref|ZP_19568809.1| polygalacturonase [Enterococcus faecium E4389]
gi|447913741|ref|YP_007395153.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
gi|68196592|gb|EAN11018.1| Galacturan 1,4-alpha-galacturonidase [Enterococcus faecium DO]
gi|257814723|gb|EEV43481.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,230,933]
gi|257822240|gb|EEV49370.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,501]
gi|257827834|gb|EEV54460.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,410]
gi|257830962|gb|EEV57569.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,408]
gi|260073180|gb|EEW61525.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium C68]
gi|291589112|gb|EFF20926.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1071]
gi|291606166|gb|EFF35588.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1162]
gi|313590498|gb|EFR69343.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|313593259|gb|EFR72104.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|313595004|gb|EFR73849.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|313598763|gb|EFR77608.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|313642155|gb|EFS06735.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|313644102|gb|EFS08682.1| polygalacturonase [Enterococcus faecium TX0082]
gi|364090036|gb|EHM32668.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4452]
gi|364093766|gb|EHM36003.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4453]
gi|378939548|gb|AFC64620.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|388534912|gb|AFK60104.1| pectin lyase [Enterococcus faecium DO]
gi|402919804|gb|EJX40370.1| polygalacturonase [Enterococcus faecium R501]
gi|402931909|gb|EJX51460.1| polygalacturonase [Enterococcus faecium R499]
gi|402945957|gb|EJX64277.1| polygalacturonase [Enterococcus faecium P1190]
gi|402947330|gb|EJX65549.1| polygalacturonase [Enterococcus faecium P1986]
gi|402955965|gb|EJX73454.1| polygalacturonase [Enterococcus faecium P1137]
gi|402959987|gb|EJX77180.1| polygalacturonase [Enterococcus faecium P1139]
gi|402963038|gb|EJX79936.1| polygalacturonase [Enterococcus faecium P1123]
gi|402964595|gb|EJX81367.1| polygalacturonase [Enterococcus faecium ERV99]
gi|402970840|gb|EJX87153.1| polygalacturonase [Enterococcus faecium ERV69]
gi|402974315|gb|EJX90374.1| polygalacturonase [Enterococcus faecium ERV38]
gi|402978299|gb|EJX94052.1| polygalacturonase [Enterococcus faecium ERV26]
gi|402995607|gb|EJY10050.1| polygalacturonase [Enterococcus faecium ERV1]
gi|402997994|gb|EJY12279.1| polygalacturonase [Enterococcus faecium E417]
gi|403006146|gb|EJY19813.1| polygalacturonase [Enterococcus faecium C497]
gi|403010843|gb|EJY24188.1| polygalacturonase [Enterococcus faecium C1904]
gi|403019826|gb|EJY32405.1| polygalacturonase [Enterococcus faecium 514]
gi|403023540|gb|EJY35785.1| polygalacturonase [Enterococcus faecium 510]
gi|403024463|gb|EJY36619.1| polygalacturonase [Enterococcus faecium 511]
gi|403032239|gb|EJY43807.1| polygalacturonase [Enterococcus faecium 509]
gi|403036560|gb|EJY47906.1| polygalacturonase [Enterococcus faecium 506]
gi|404452556|gb|EJZ99740.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|404456111|gb|EKA02868.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|404461640|gb|EKA07534.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|404467219|gb|EKA12401.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410735255|gb|EKQ77169.1| pectin lyase [Enterococcus sp. GMD5E]
gi|425722196|gb|EKU85093.1| hypothetical protein HMPREF9307_02178 [Enterococcus durans
FB129-CNAB-4]
gi|430441028|gb|ELA51171.1| polygalacturonase [Enterococcus faecium E0120]
gi|430479695|gb|ELA56911.1| polygalacturonase [Enterococcus faecium E0333]
gi|430495386|gb|ELA71561.1| polygalacturonase [Enterococcus faecium E1050]
gi|430534971|gb|ELA75396.1| polygalacturonase [Enterococcus faecium E1133]
gi|430545280|gb|ELA85263.1| polygalacturonase [Enterococcus faecium E1392]
gi|430548826|gb|ELA88674.1| polygalacturonase [Enterococcus faecium E1574]
gi|430554873|gb|ELA94441.1| polygalacturonase [Enterococcus faecium E1576]
gi|430559243|gb|ELA98603.1| polygalacturonase [Enterococcus faecium E1578]
gi|430571641|gb|ELB10527.1| polygalacturonase [Enterococcus faecium E1622]
gi|430576635|gb|ELB15272.1| polygalacturonase [Enterococcus faecium E1623]
gi|430577973|gb|ELB16549.1| polygalacturonase [Enterococcus faecium E1626]
gi|430580353|gb|ELB18826.1| polygalacturonase [Enterococcus faecium E1627]
gi|430585070|gb|ELB23371.1| polygalacturonase [Enterococcus faecium E1634]
gi|430589382|gb|ELB27511.1| polygalacturonase [Enterococcus faecium E1731]
gi|430604693|gb|ELB42128.1| polygalacturonase [Enterococcus faecium E2134]
gi|430605136|gb|ELB42541.1| polygalacturonase [Enterococcus faecium E2071]
gi|430609790|gb|ELB46967.1| polygalacturonase [Enterococcus faecium E2297]
gi|430616651|gb|ELB53546.1| polygalacturonase [Enterococcus faecium E2883]
gi|430628012|gb|ELB64470.1| polygalacturonase [Enterococcus faecium E1321]
gi|430632933|gb|ELB69123.1| polygalacturonase [Enterococcus faecium E1644]
gi|430633934|gb|ELB70079.1| polygalacturonase [Enterococcus faecium E2369]
gi|430639091|gb|ELB74973.1| polygalacturonase [Enterococcus faecium E4389]
gi|445189450|gb|AGE31092.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
Length = 445
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 181/349 (51%), Gaps = 24/349 (6%)
Query: 88 ADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEP 147
+DGG ++VP G++LTG+ L S+ L++ A+L S D ++P++ + R
Sbjct: 28 SDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVH 82
Query: 148 GGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVT--RPYLIEVMFSDNVQ 205
++S I+ N+ ++ VTG T++G G+ WW +R + N+ RP L+ +
Sbjct: 83 RKVYASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRIT 141
Query: 206 ISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGD 265
+ ++ LI SPSW ++P+ SN LTI P DSPNTDGI+P+SC N RI + +I GD
Sbjct: 142 VKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGD 201
Query: 266 DCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN 325
DC+A+K+G ++ ++ +++ I + + LGSEMSG I+++ +
Sbjct: 202 DCIAIKAGTEDTYERIA--CENITITNCTMVH-GHGGVVLGSEMSGSIRNITISNCIFQE 258
Query: 326 TQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-----YVFWMTGDYGSHPDPGFDPKAL-- 378
T G+R+K+ GRG V++I V + M + +++ G G P ++ KA
Sbjct: 259 TDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYV-WEKKAYPI 317
Query: 379 ----PTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNVTIKLTE 422
P I++ ++ A NV SA + G+ I N+ + + +
Sbjct: 318 DERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQ 366
>gi|424907689|ref|ZP_18331159.1| polygalacturonase [Enterococcus faecium R497]
gi|425060672|ref|ZP_18463956.1| polygalacturonase [Enterococcus faecium 503]
gi|402930043|gb|EJX49746.1| polygalacturonase [Enterococcus faecium R497]
gi|403042383|gb|EJY53341.1| polygalacturonase [Enterococcus faecium 503]
Length = 445
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 181/349 (51%), Gaps = 24/349 (6%)
Query: 88 ADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEP 147
+DGG ++VP G++LTG+ L S+ L++ A+L S D ++P++ + R
Sbjct: 28 SDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVH 82
Query: 148 GGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVT--RPYLIEVMFSDNVQ 205
++S I+ N+ ++ VTG T++G G+ WW +R + N+ RP L+ +
Sbjct: 83 RKVYASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRIT 141
Query: 206 ISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGD 265
+ ++ LI SPSW ++P+ SN LTI P DSPNTDGI+P+SC N RI + +I GD
Sbjct: 142 VKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGD 201
Query: 266 DCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN 325
DC+A+K+G ++ ++ +++ I + + LGSEMSG I+++ +
Sbjct: 202 DCIAIKAGTEDTYERIA--CENITITNCTMVH-GHGGVVLGSEMSGSIRNITISNCIFQE 258
Query: 326 TQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-----YVFWMTGDYGSHPDPGFDPKAL-- 378
T G+R+K+ GRG V++I V + M + +++ G G P ++ KA
Sbjct: 259 TDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYV-WEKKAYPI 317
Query: 379 ----PTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNVTIKLTE 422
P I++ ++ A NV SA + G+ I N+ + + +
Sbjct: 318 DERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQ 366
>gi|257883307|ref|ZP_05662960.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,502]
gi|294622157|ref|ZP_06701229.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium U0317]
gi|424791201|ref|ZP_18217679.1| polygalacturonase [Enterococcus faecium V689]
gi|424796708|ref|ZP_18222399.1| polygalacturonase [Enterococcus faecium S447]
gi|424949492|ref|ZP_18365160.1| polygalacturonase [Enterococcus faecium R496]
gi|424953665|ref|ZP_18368614.1| polygalacturonase [Enterococcus faecium R494]
gi|424956671|ref|ZP_18371436.1| polygalacturonase [Enterococcus faecium R446]
gi|424968083|ref|ZP_18381741.1| polygalacturonase [Enterococcus faecium P1140]
gi|424994459|ref|ZP_18406396.1| polygalacturonase [Enterococcus faecium ERV168]
gi|424998609|ref|ZP_18410283.1| polygalacturonase [Enterococcus faecium ERV165]
gi|425001105|ref|ZP_18412635.1| polygalacturonase [Enterococcus faecium ERV161]
gi|425005198|ref|ZP_18416463.1| polygalacturonase [Enterococcus faecium ERV102]
gi|425011663|ref|ZP_18422546.1| polygalacturonase [Enterococcus faecium E422]
gi|425017819|ref|ZP_18428304.1| polygalacturonase [Enterococcus faecium C621]
gi|425032259|ref|ZP_18437327.1| polygalacturonase [Enterococcus faecium 515]
gi|425039369|ref|ZP_18443912.1| polygalacturonase [Enterococcus faecium 513]
gi|431777897|ref|ZP_19566138.1| polygalacturonase [Enterococcus faecium E2560]
gi|431783614|ref|ZP_19571712.1| polygalacturonase [Enterococcus faecium E6012]
gi|431786798|ref|ZP_19574796.1| polygalacturonase [Enterococcus faecium E6045]
gi|257818965|gb|EEV46293.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,502]
gi|291598326|gb|EFF29415.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium U0317]
gi|402919867|gb|EJX40428.1| polygalacturonase [Enterococcus faecium V689]
gi|402922635|gb|EJX42996.1| polygalacturonase [Enterococcus faecium S447]
gi|402934197|gb|EJX53567.1| polygalacturonase [Enterococcus faecium R496]
gi|402938569|gb|EJX57565.1| polygalacturonase [Enterococcus faecium R494]
gi|402945367|gb|EJX63722.1| polygalacturonase [Enterococcus faecium R446]
gi|402952945|gb|EJX70709.1| polygalacturonase [Enterococcus faecium P1140]
gi|402980034|gb|EJX95667.1| polygalacturonase [Enterococcus faecium ERV168]
gi|402982456|gb|EJX97919.1| polygalacturonase [Enterococcus faecium ERV165]
gi|402987170|gb|EJY02259.1| polygalacturonase [Enterococcus faecium ERV102]
gi|402987432|gb|EJY02495.1| polygalacturonase [Enterococcus faecium ERV161]
gi|402995999|gb|EJY10409.1| polygalacturonase [Enterococcus faecium E422]
gi|403003645|gb|EJY17529.1| polygalacturonase [Enterococcus faecium C621]
gi|403013568|gb|EJY26654.1| polygalacturonase [Enterococcus faecium 515]
gi|403016115|gb|EJY28950.1| polygalacturonase [Enterococcus faecium 513]
gi|430638501|gb|ELB74432.1| polygalacturonase [Enterococcus faecium E2560]
gi|430644798|gb|ELB80379.1| polygalacturonase [Enterococcus faecium E6012]
gi|430644949|gb|ELB80513.1| polygalacturonase [Enterococcus faecium E6045]
Length = 445
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 181/349 (51%), Gaps = 24/349 (6%)
Query: 88 ADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEP 147
+DGG ++VP G++LTG+ L S+ L++ A+L S D ++P++ + R
Sbjct: 28 SDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVH 82
Query: 148 GGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVT--RPYLIEVMFSDNVQ 205
++S I+ N+ ++ VTG T++G G+ WW +R + N+ RP L+ +
Sbjct: 83 RKVYASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRIT 141
Query: 206 ISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGD 265
+ ++ LI SPSW ++P+ SN LTI P DSPNTDGI+P+SC N RI + +I GD
Sbjct: 142 VKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGD 201
Query: 266 DCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN 325
DC+A+K+G ++ ++ +++ I + + LGSEMSG I+++ +
Sbjct: 202 DCIAIKAGTEDTYERIA--CENITITNCTMVH-GHGGVVLGSEMSGSIRNITISNCIFQE 258
Query: 326 TQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-----YVFWMTGDYGSHPDPGFDPKALP- 379
T G+R+K+ GRG V++I V + M + +++ G G P ++ KA P
Sbjct: 259 TDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYV-WEKKAYPI 317
Query: 380 -----TVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNVTIKLTE 422
I++ ++ A NV SA + G+ I N+ + + +
Sbjct: 318 DERTSAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQ 366
>gi|254392545|ref|ZP_05007723.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|197706210|gb|EDY52022.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 462
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 199/394 (50%), Gaps = 53/394 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+T +G VGDG T NT+AF AI + GG +++VP G++LTG+ L S L++ +
Sbjct: 52 ITRYGAVGDGVTKNTRAFRDAIRACHRA---GGGRVVVPRGRFLTGAIQLRSQVELHVRE 108
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG-- 176
+L S D ++ LP + + R +SS I+ D+ +T G T++GQG
Sbjct: 109 GGTVLFSTDPRDY--LPMV--FTRWEGTECWNYSSFIYARGQQDLAIT-GRGTLDGQGMA 163
Query: 177 EPW--W---------------------IKYRKKQF---NVTRPYLIEVMFSDNVQISNLT 210
PW W + ++ F + RP +I+ N+ + ++T
Sbjct: 164 GPWKSWRDPGGNALVDQAELRRMGTEGVPVDQRLFGDGHHLRPNMIQFYDCRNILMQDIT 223
Query: 211 LIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAV 270
+++ P W +HPV NV ++ + + I+ N+DG++P+ ++ I + DD +AV
Sbjct: 224 VLEPPMWTIHPVLCRNVTLRNVDVIGRIN--NSDGVDPECTSDMLITGCRFHTEDDSIAV 281
Query: 271 KSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDIT-------- 322
KSG DE G ++G+P+++++IR + S +A+GSEMSGG++DV AED
Sbjct: 282 KSGRDEDGHRIGVPSRNIVIRDCV-FSGRWGGVAVGSEMSGGVRDVFAEDCRINPVDFPG 340
Query: 323 AINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTM-KYVFWMTGDYGSHPDPGFDPKALPTV 381
N + V IKT RG + +Y+RR T + + + ++T Y G + +
Sbjct: 341 RYNPRHPVFIKTNKKRGGSITGVYIRRFTGRAIDRDCVYLTTRYA-----GQQGERPAVI 395
Query: 382 TGINYRDMVADNVTQSAKLDGIRNDPFTGICISN 415
I DMV D ++ L+G+ +DPFTG+ I+
Sbjct: 396 RDIRIEDMVHDGARRAIHLEGLDSDPFTGVHIAR 429
>gi|375100956|ref|ZP_09747219.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661688|gb|EHR61566.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 557
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 206/416 (49%), Gaps = 57/416 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+TDFG G+ +T AF AI +S A GG ++++P G++LTG+ +L S+ L++
Sbjct: 75 ITDFGADPTGEHLSTAAFRDAIEEVS---AAGGGRVVIPAGEFLTGAIHLRSNVELHVGS 131
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A++ SQ+ + LP + Y R +S I+ + +V +TG + ++GQ +
Sbjct: 132 GAVVRFSQNPDHY--LPAV--YTRWEGVELYNYSPFIYARGVENVAITG-SGVLDGQADE 186
Query: 179 --WW---------------------IKYRKKQFNV---TRPYLIEVMFSDNVQISNLTLI 212
WW + +++F RP ++ S N+ + +TL
Sbjct: 187 KHWWNWSGSTQAEDRETLFRMGEQGVPVEQRRFGAGHHLRPNFVQFYDSRNILVQGVTLK 246
Query: 213 DSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKS 272
+SP W +HPV S N+ + G+ + +P + PN DG+NP+S + I+++ +GDDC+A+KS
Sbjct: 247 NSPMWMIHPVLSHNITVDGVVLDSP-EGPNNDGVNPESSRDVVIKNSRFDNGDDCIAIKS 305
Query: 273 GWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAED--ITAINTQSGV 330
G + G ++G+P+++++I + + +GSEMSG +++V A+ + + N +
Sbjct: 306 GRNADGRRIGVPSENILIENN-HMQDGHGGVVMGSEMSGSVRNVFAQHNVMDSPNLHRAL 364
Query: 331 RIKTAVGRGAYVKEIYVRRMTMKTMK------YVFWMTGDYGSHPDPGFDPKALPTVTGI 384
RIKT RG V+ +Y R T+ + F+ D G H P V I
Sbjct: 365 RIKTNSVRGGIVENVYFRHNTVVEIGDEVIRVNFFYEEADSGPH---------TPIVRNI 415
Query: 385 NYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSR 440
+ D+ +DN + L G P + + +++ E P+ L+ N+QG+ R
Sbjct: 416 HIEDLRSDNGEYALYLRGYERSPVSNVTVTDSVFTGVEHPQLLE----NVQGLRMR 467
>gi|340751772|ref|ZP_08688582.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
gi|229420732|gb|EEO35779.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
Length = 512
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 184/384 (47%), Gaps = 31/384 (8%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
FG GDG +++T A TAI + + ++ +P GK+L S L + T+ + + A
Sbjct: 86 FGAKGDGVSNDTLALQTAIMSCPE-----NGRVYIPKGKYLITSLFLKDNLTIELGEGAE 140
Query: 122 LLASQDESEWPLLPPLPSYGRGRD--------EPGGRFSSLIFGTNLTDVVVTGGNATIN 173
LL + +LP L + + P F+SLI G N+ +V + G +N
Sbjct: 141 LLGDTKRENFGILPGLIDNDKNEEYYLGSWEGNPLDSFTSLITGINVKNVRIIG-RGCLN 199
Query: 174 GQG--EPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQG 231
GQ E WW + K RP I + +NV I + +++SPSW +HP ++N+
Sbjct: 200 GQASKENWWKNPKVKNI-AWRPRSIFLNSCENVVIEGIKIMNSPSWTIHPFLTNNLRFIN 258
Query: 232 LTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIR 291
L I P DSPNTDGI+P+SC N GDDC+A+KSG G + P+++ II+
Sbjct: 259 LKIENPADSPNTDGIDPESCENVEYIGIDFSVGDDCIAIKSGKLYLGKVLNKPSKNFIIK 318
Query: 292 RLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG--AYVKEIYVRR 349
+ + +GSEMSGG++++ E T G+RIKT GRG + IYV+
Sbjct: 319 NC-SMKYGHGGVVIGSEMSGGVENINIEKCDFYKTDKGIRIKTRRGRGENGVIDGIYVKN 377
Query: 350 MTMKTMKYVFWMTGDYGSHPDPGFD----------PKALPTVTGINYRDMVA-DNVTQSA 398
++MK +K F Y PD + + P++ I++ ++ A D + +
Sbjct: 378 ISMKEVKVPFVFNSFYFCDPDGKTEYVYTKEKLPVDERTPSIKNISFENIKAEDTLVCAG 437
Query: 399 KLDGIRNDPFTGICISNVTIKLTE 422
L G+ P + NV + +
Sbjct: 438 FLYGLPEKPIENVKFKNVEVDFKD 461
>gi|29346428|ref|NP_809931.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
gi|29338324|gb|AAO76125.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
Length = 445
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 186/408 (45%), Gaps = 52/408 (12%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R + G +GK NTK N+ I L++ GG L P G +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKALNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 76
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL + A LL S + ++ LP + G F LI+ + ++ + G T+
Sbjct: 77 TLELEAGATLLFSDNFDDY--LPFVEVRHEGVMMKS--FQPLIYAVDAENITIKG-EGTL 131
Query: 173 NGQGEPWWIKYRKKQFNVT----------------------------------------R 192
+GQG+ WW+++ + ++ R
Sbjct: 132 DGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAQNDTTAIYAETNKDYVSTLQRRFFR 191
Query: 193 PYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCT 252
P I+ + V+I + +++SP W V+P + NV I+G+TI + SPNTDGINP+SC
Sbjct: 192 PPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITINN-VPSPNTDGINPESCR 250
Query: 253 NTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGG 312
N I D +I GDDC+ +KSG D ++G+P +++ I +S + +GSEMSG
Sbjct: 251 NVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS-GHGGVVIGSEMSGS 309
Query: 313 IKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDP 371
++ V + T G+RIK+ GRG V++I V + M +K + Y P
Sbjct: 310 VRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVVLNLKYSQMPAE 369
Query: 372 GFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
+ P ++ M +V K+ G+ P + I + ++ I+
Sbjct: 370 AKSERT-PIFRNVHISGMTVTDVKTPIKIVGLEEAPISDIVLRDIHIQ 416
>gi|431472772|ref|ZP_19514500.1| polygalacturonase [Enterococcus faecium E1630]
gi|431761402|ref|ZP_19549976.1| polygalacturonase [Enterococcus faecium E3346]
gi|430583557|gb|ELB21919.1| polygalacturonase [Enterococcus faecium E1630]
gi|430621543|gb|ELB58304.1| polygalacturonase [Enterococcus faecium E3346]
Length = 445
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 181/349 (51%), Gaps = 24/349 (6%)
Query: 88 ADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEP 147
+DGG ++VP G++LTG+ L S+ L++ A+L S D ++P++ + R
Sbjct: 28 SDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVH 82
Query: 148 GGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVT--RPYLIEVMFSDNVQ 205
++S I+ N+ ++ VTG T++G G+ WW +R + N+ RP L+ +
Sbjct: 83 RKVYASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRIT 141
Query: 206 ISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGD 265
+ ++ LI SPSW ++P+ SN LTI P DSPNTDGI+P+SC N RI + +I GD
Sbjct: 142 VKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGD 201
Query: 266 DCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN 325
DC+A+K+G ++ ++ +++ I + + LGSEMSG I+++ +
Sbjct: 202 DCIAIKAGTEDTYERIA--CENITITNCTMVH-GHGGVVLGSEMSGSIRNITISNCIFQE 258
Query: 326 TQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-----YVFWMTGDYGSHPDPGFDPKAL-- 378
T G+R+K+ GRG V++I V + M + +++ G G P ++ KA
Sbjct: 259 TDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYV-WEKKAYPI 317
Query: 379 ----PTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNVTIKLTE 422
P I++ ++ A NV SA + G+ I N+ + + +
Sbjct: 318 DERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQ 366
>gi|389574386|ref|ZP_10164450.1| glycoside hydrolase [Bacillus sp. M 2-6]
gi|388425994|gb|EIL83815.1| glycoside hydrolase [Bacillus sp. M 2-6]
Length = 463
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 199/406 (49%), Gaps = 59/406 (14%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
+G G +T A +AI + + G ++++P G +LTG+ L S+ L++H++A
Sbjct: 59 YGADNKGIELSTNAIQSAIDDAHRLK---GGRVLIPEGTFLTGALELKSNVELHLHENAY 115
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP--W 179
+ SQD ++ LP + + G + +S LI+ + ++ +TG T++G+G+ W
Sbjct: 116 VSFSQDTRDY--LPLVLTRYEGIELY--NYSPLIYAHHAENIAITGA-GTLDGRGDEHHW 170
Query: 180 W-IKY---------RKKQF-------------------NVTRPYLIEVMFSDNVQISNLT 210
W KY R +Q + R I+ N+ I +T
Sbjct: 171 WPWKYGTNGQPSQDRDRQLLFEMAEKRIPVEERVFGEGHYLRSSFIQPYNCQNILIEGVT 230
Query: 211 LIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAV 270
+ DSP W VHPV S NV+++G+ I PNTDG+NP+SC + IED Y +GDDC+A+
Sbjct: 231 VKDSPMWQVHPVLSENVIVRGVNIIG--HGPNTDGVNPESCRHVLIEDCYFDNGDDCIAI 288
Query: 271 KSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAED--ITAINTQS 328
KSG +E G ++G+P+++++IRR + + +GSE+SGG+K V AED + + N
Sbjct: 289 KSGRNEDGRRIGVPSENIVIRRN-TMRDGHGGVTIGSEISGGVKYVYAEDNVMDSPNLDR 347
Query: 329 GVRIKTAVGRGAYVKEIYVRRMTMKTMKY------VFWMTGDYGSHPDPGFDPKALPTVT 382
+RIKT RG ++ IY + +K++K+ + + GD G H P V
Sbjct: 348 ALRIKTNSVRGGTIEHIYFKNNLVKSLKHEVVCIDMMYEEGDAGPH---------RPVVR 398
Query: 383 GINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQ 428
I + + K+ + P T + + I P L+
Sbjct: 399 HIEVEGLKSSGGRYGVKIAAYSHSPVTHFKMKDCVIDDVTYPLSLE 444
>gi|393781526|ref|ZP_10369720.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
gi|392676130|gb|EIY69568.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
Length = 447
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 196/429 (45%), Gaps = 53/429 (12%)
Query: 48 QALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFN 107
A+ + + G DGKT NT N + LS+ GG L P G +LTG+
Sbjct: 16 MAITLKAERVDMLKSGAKADGKTLNTTLINHTVDRLSQA---GGGTLFFPAGTYLTGAIR 72
Query: 108 LTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG 167
L S+ TL + A LL S + ++ LP + G FS LI + ++ + G
Sbjct: 73 LKSNITLELEAGATLLFSDNFDDY--LPFMEVRHEGVMMKS--FSPLISAMDAENITIKG 128
Query: 168 GNATINGQGEPWWIKYRK----------KQFNVTRPYL-----IEVMFSD---------- 202
T++GQG+ WW ++ + ++ N +P +E ++++
Sbjct: 129 -EGTLDGQGKAWWTEFFRIYVDLEKNGMRELNKYQPLWERENDVEALYAETNEDWHGTLK 187
Query: 203 ---------------NVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGIN 247
V+I + +I+SP W V+P + NV++ G+TI + SPNTDGIN
Sbjct: 188 RRFFRPPFIQPVRCRRVRIEGVKIINSPFWTVNPEFCDNVVVTGVTIHN-VPSPNTDGIN 246
Query: 248 PDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGS 307
P+SC N I D +I GDDC+ +KSG D ++G+P +++ I +S + +GS
Sbjct: 247 PESCRNVHISDCHISVGDDCITLKSGRDAQARRLGVPCENITITNCTMLS-GHGGVVIGS 305
Query: 308 EMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYG 366
EMSG ++ V + T G+RIK+ GRG V++I V + M +K + Y
Sbjct: 306 EMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIIMSNIKREAVVLNLKYS 365
Query: 367 SHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKE 426
P + P I+ + A V K+ G+ P T I + ++ +K + K
Sbjct: 366 EMPVEPMSERT-PLFRDISISGLTAVGVKTPVKIVGLEEAPVTDIILRDINVK-NAREKC 423
Query: 427 LQWNCTNIQ 435
+ NC I+
Sbjct: 424 IFENCERIR 432
>gi|157693735|ref|YP_001488197.1| glycoside hydrolase [Bacillus pumilus SAFR-032]
gi|157682493|gb|ABV63637.1| glycoside hydrolase [Bacillus pumilus SAFR-032]
Length = 463
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 200/409 (48%), Gaps = 59/409 (14%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ +G G +T+A +AI + + G ++++P G ++TG+ L SH L++H+
Sbjct: 56 VVHYGADAQGIELSTEAIQSAIDDAHRLK---GGRVLIPEGTFVTGALELKSHVELHLHE 112
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A + SQ+ ++ LP + + G + +S LI+ + ++ +TG T++G+G+
Sbjct: 113 KAYVSFSQNPKDY--LPLVLTRYEGVELYN--YSPLIYAHHAENIAITGA-GTLDGRGDE 167
Query: 179 --WW-IKY---------RKKQF-------------------NVTRPYLIEVMFSDNVQIS 207
WW KY R +Q + R I+ V I
Sbjct: 168 HHWWPWKYGTNGQPSQERDRQLLFDMAEKRRPVEERVFGEGHYLRSSFIQPYQCQQVLIE 227
Query: 208 NLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDC 267
+T+ DSP W +HPV S +V+++G+ I PNTDG+NP+SC N IED Y +GDDC
Sbjct: 228 GVTVKDSPMWQIHPVLSEHVIVRGVHIIG--HGPNTDGVNPESCRNVLIEDCYFDNGDDC 285
Query: 268 VAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAED--ITAIN 325
+A+KSG +E G ++G+P+++++IRR + + +GSE+SGG++ V AE+ + + N
Sbjct: 286 IAIKSGRNEDGRRIGIPSENIVIRRN-EMRDGHGGVTIGSEISGGVRYVYAENNVMDSPN 344
Query: 326 TQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY------VFWMTGDYGSHPDPGFDPKALP 379
+RIKT RG ++ IY + T+K++K+ + + GD G H P
Sbjct: 345 LDRALRIKTNSVRGGTIEHIYFKNNTVKSLKHEVVCIDMMYEEGDAGPH---------RP 395
Query: 380 TVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQ 428
V I + + K+ + P T + N I P L+
Sbjct: 396 VVRHIEVEGLKSSGGRYGVKIAAYSHSPVTNFNMKNCVIDHVTYPLSLE 444
>gi|430834097|ref|ZP_19452106.1| polygalacturonase [Enterococcus faecium E0679]
gi|430485620|gb|ELA62520.1| polygalacturonase [Enterococcus faecium E0679]
Length = 452
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 181/349 (51%), Gaps = 24/349 (6%)
Query: 88 ADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEP 147
+DGG ++VP G++LTG+ L S+ L++ A+L S D ++P++ + R
Sbjct: 28 SDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVH 82
Query: 148 GGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVT--RPYLIEVMFSDNVQ 205
++S I+ N+ ++ VTG T++G G+ WW +R + N+ RP L+ +
Sbjct: 83 RKVYASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRIT 141
Query: 206 ISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGD 265
+ ++ LI SPSW ++P+ SN LTI P DSPNTDGI+P+SC N RI + +I GD
Sbjct: 142 VKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGD 201
Query: 266 DCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN 325
DC+A+K+G ++ ++ +++ I + + LGSEMSG I+++ +
Sbjct: 202 DCIAIKAGTEDTYERIA--CENITITNCTMVH-GHGGVVLGSEMSGSIRNITISNCIFQE 258
Query: 326 TQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-----VFWMTGDYGSHPDPGFDPKAL-- 378
T G+R+K+ GRG V++I V + M + +++ G G P ++ KA
Sbjct: 259 TDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYV-WEKKAYPI 317
Query: 379 ----PTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNVTIKLTE 422
P I++ ++ A NV SA + G+ I N+ + + +
Sbjct: 318 DERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQ 366
>gi|433424436|ref|ZP_20406465.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp.
BAB2207]
gi|432198085|gb|ELK54408.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp.
BAB2207]
Length = 519
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 189/384 (49%), Gaps = 37/384 (9%)
Query: 64 GVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLL 123
G+ D + +T A A+ + A G ++ +PPG + + + T + A L
Sbjct: 12 GIDDDDSLDTAAIQAALDD----CAGEGGEVYLPPGTYRSAPLRVGDDTTFRLANGAELR 67
Query: 124 ASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW--- 180
QD +E+P + S G D+ G F + + +V +TG I+G G WW
Sbjct: 68 FVQDFTEFPTVE---SRWEGWDQDG--FHPCLHVADAENVTITG-EGVIDGGGSYWWEFV 121
Query: 181 -----------------IKYRKKQFNVT----RPYLIEVMFSDNVQISNLTLIDSPSWNV 219
I+ +Q V+ RP L+++ +NV +S +TL +SP WN
Sbjct: 122 SLPPEQYPSELTERLEEIRRGNQQDEVSTFTVRPPLLQIDGCENVTVSGVTLRNSPFWNT 181
Query: 220 HPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGI 279
H VYS +V I ++I+ P D+PN DGI+ DS R+ D +I +GDD + +KSG DE G
Sbjct: 182 HVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEQGR 241
Query: 280 KVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG 339
+VG PT+++++ + + +GSE +G ++ V + T +T G+RIK+ GRG
Sbjct: 242 EVGRPTENVVVTNC-TVEHGHGGVVIGSETAGDVRHVTVTNCTFTDTDRGIRIKSKRGRG 300
Query: 340 AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDP--KALPTVTGINYRDMVADNVTQS 397
V+++ + M+ + F + G Y + D +P +A P V +++ + A+ V +
Sbjct: 301 GTVEDLRFDTIAMRRVACPFVINGYYQTDIDSDPEPVTEATPNVRNVDFHHITAEEVESA 360
Query: 398 AKLDGIRNDPFTGICISNVTIKLT 421
A L G+ F GI ++V I T
Sbjct: 361 AFLAGLPEQRFEGISFTDVDIDAT 384
>gi|294816001|ref|ZP_06774644.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
gi|326444344|ref|ZP_08219078.1| glycoside hydrolase family 28 [Streptomyces clavuligerus ATCC
27064]
gi|294328600|gb|EFG10243.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
Length = 477
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 199/394 (50%), Gaps = 53/394 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+T +G VGDG T NT+AF AI + GG +++VP G++LTG+ L S L++ +
Sbjct: 67 ITRYGAVGDGVTKNTRAFRDAIRACHRA---GGGRVVVPRGRFLTGAIQLRSQVELHVRE 123
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG-- 176
+L S D ++ LP + + R +SS I+ D+ +T G T++GQG
Sbjct: 124 GGTVLFSTDPRDY--LPMV--FTRWEGTECWNYSSFIYARGQQDLAIT-GRGTLDGQGMA 178
Query: 177 EPW--W---------------------IKYRKKQF---NVTRPYLIEVMFSDNVQISNLT 210
PW W + ++ F + RP +I+ N+ + ++T
Sbjct: 179 GPWKSWRDPGGNALVDQAELRRMGTEGVPVDQRLFGDGHHLRPNMIQFYDCRNILMQDIT 238
Query: 211 LIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAV 270
+++ P W +HPV NV ++ + + I+ N+DG++P+ ++ I + DD +AV
Sbjct: 239 VLEPPMWTIHPVLCRNVTLRNVDVIGRIN--NSDGVDPECTSDMLITGCRFHTEDDSIAV 296
Query: 271 KSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDIT-------- 322
KSG DE G ++G+P+++++IR + S +A+GSEMSGG++DV AED
Sbjct: 297 KSGRDEDGHRIGVPSRNIVIRDCV-FSGRWGGVAVGSEMSGGVRDVFAEDCRINPVDFPG 355
Query: 323 AINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTM-KYVFWMTGDYGSHPDPGFDPKALPTV 381
N + V IKT RG + +Y+RR T + + + ++T Y G + +
Sbjct: 356 RYNPRHPVFIKTNKKRGGSITGVYIRRFTGRAIDRDCVYLTTRYA-----GQQGERPAVI 410
Query: 382 TGINYRDMVADNVTQSAKLDGIRNDPFTGICISN 415
I DMV D ++ L+G+ +DPFTG+ I+
Sbjct: 411 RDIRIEDMVHDGARRAIHLEGLDSDPFTGVHIAR 444
>gi|268317938|ref|YP_003291657.1| glycoside hydrolase [Rhodothermus marinus DSM 4252]
gi|345304218|ref|YP_004826120.1| polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
gi|262335472|gb|ACY49269.1| glycoside hydrolase family 28 [Rhodothermus marinus DSM 4252]
gi|345113451|gb|AEN74283.1| Polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
Length = 470
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 192/406 (47%), Gaps = 56/406 (13%)
Query: 58 VLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
VLT +G VGDG+T T AF AI + GG +++VP G +LTG +L S+ L++
Sbjct: 58 VLTRYGAVGDGRTDCTDAFRQAIEACHR---AGGGRVVVPRGTFLTGPIHLASNVNLHLD 114
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
A + QD + + LP + + R G +S I+ +V +TG + ++GQ +
Sbjct: 115 DGATVRFKQDPAAY--LPVV--FTRWEGVEGMNYSPFIYAFGQENVAITG-SGVLDGQAD 169
Query: 178 P--WWI-----------------KYRKKQFNVT-----------------RPYLIEVMFS 201
WW + R++ F + RP I+
Sbjct: 170 ENHWWPWKGRKEYGWREGMPTQDEARRRLFEMAEAGVPPEQRILGEGSYLRPNFIQFYRC 229
Query: 202 DNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYI 261
NV I +T+++SP W +HPV NV ++G+T+R+ PN DG NP+SC IED
Sbjct: 230 RNVLIEGVTIVNSPMWEIHPVLCENVTVRGVTVRS--HGPNNDGCNPESCRYVLIEDCLF 287
Query: 262 VSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRAE- 319
+GDDC+A+KSG + G +V +P+ +++IR C D + +GSE+SGG + AE
Sbjct: 288 DTGDDCIAIKSGRNADGRRVNVPSAYIVIRN--CKMRDGHGGVVIGSEISGGAHHIYAER 345
Query: 320 -DITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPG-FDPKA 377
++++ N +RIKT RG ++ IY+R + + + Y D G FD
Sbjct: 346 CEMSSPNLDRALRIKTNSVRGGLIEHIYMREVEVGQVADAVIRVNFYYEEGDAGPFD--- 402
Query: 378 LPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEK 423
P V I R++ + + L G P + + + T EK
Sbjct: 403 -PIVRHIEVRNLTSRQSPYALYLRGYARSPIRDVRLIDCTFDGVEK 447
>gi|448540079|ref|ZP_21623316.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-646]
gi|448552184|ref|ZP_21629848.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-645]
gi|448553851|ref|ZP_21630729.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-644]
gi|445709350|gb|ELZ61181.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-645]
gi|445709953|gb|ELZ61776.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-646]
gi|445719854|gb|ELZ71532.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-644]
Length = 516
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 189/384 (49%), Gaps = 37/384 (9%)
Query: 64 GVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLL 123
G+ D + +T A A+ + A G ++ +PPG + + + T + A L
Sbjct: 12 GIDDDGSLDTAAIQAALDD----CAGTGGEVYLPPGTYRSAPLRVGDDTTFRLANGAELR 67
Query: 124 ASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW--- 180
QD +E+P + S G ++ G F + + +V +TG I+G G WW
Sbjct: 68 FVQDFTEFPTVE---SRWEGWNQDG--FHPCLHVADAANVTITG-EGVIDGGGSYWWEFV 121
Query: 181 -----------------IKYRKKQFNVT----RPYLIEVMFSDNVQISNLTLIDSPSWNV 219
I+ KQ V+ RP L+++ +NV +S +TL +SP WN
Sbjct: 122 SVPPEQYPSELTERLEAIRSGNKQDAVSTFTVRPPLLQIDGCENVTVSGVTLRNSPFWNT 181
Query: 220 HPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGI 279
H VYS +V I ++IR P D+PN DGI+ DS R+ D +I +GDD + +KSG DE G
Sbjct: 182 HVVYSDDVTIHDVSIRNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEEGR 241
Query: 280 KVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG 339
+VG PT+++++ + + +GSE +G ++ V + T +T G+RIK+ GRG
Sbjct: 242 EVGRPTENVVVTNC-TVEHGHGGVVIGSETAGDVRHVTVTNCTFTDTDRGIRIKSKRGRG 300
Query: 340 AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDP--KALPTVTGINYRDMVADNVTQS 397
V+++ + M+ + F + G Y + D +P +A P V +++ + A+ V +
Sbjct: 301 GTVEDLRFDTIVMRRVACPFVINGYYQTDIDSDPEPVTEATPNVRNVDFHHITAEEVESA 360
Query: 398 AKLDGIRNDPFTGICISNVTIKLT 421
A L G+ F GI ++V I T
Sbjct: 361 AFLAGLPEQRFEGISFTDVDIDAT 384
>gi|408369543|ref|ZP_11167324.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407745289|gb|EKF56855.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 466
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 202/412 (49%), Gaps = 55/412 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ D+G VGDG T NT+A AI GG ++++P GK+LTG +L S+ L++ K
Sbjct: 51 IMDYGAVGDGTTDNTQAIKDAIQAC---VEAGGGKVVIPAGKFLTGPIHLKSNVNLHLEK 107
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG-- 176
++ ++ ++D+ + LP + + G + +S LI+ ++ VT G+ T NGQ
Sbjct: 108 NSEVIFTKDKQAY--LPVVRTSYEGVELM--NYSPLIYAYQQKNIAVT-GSGTFNGQAGK 162
Query: 177 EPWW-----------------------IKYRKKQFNVT-------------RPYLIEVMF 200
E WW + RK + T RP E
Sbjct: 163 ENWWPWSGAERYGHKKGDPHQRDSINLPRLRKMNEDATPVSERIFGEGHHLRPTFFEPFE 222
Query: 201 SDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNY 260
S+NV I +T I++P W +HP+ +NV + G+ + + PN DG NP+ N I +
Sbjct: 223 SENVLIKGVTFINAPFWVMHPIKCTNVTVDGVKVIS--HGPNNDGCNPEYSKNVHITNCV 280
Query: 261 IVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKD--VR 317
+GDDC+A+KSG ++ G +VG+ ++++++ CI D + +GSE+S G+++ VR
Sbjct: 281 FDTGDDCIAIKSGRNDEGRRVGIVSENIVVEN--CIMKDGHGGVVMGSEISAGVRNVYVR 338
Query: 318 AEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKA 377
+ + N +RIKT RG +V+ ++V+ + + +K F Y + D + +
Sbjct: 339 NCKMDSPNLDRAIRIKTNTLRGGFVENVFVKDIQVGQVKEAFLKINTYYAIYD-NQEGEH 397
Query: 378 LPTVTGINYRDM-VADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQ 428
+PT+ I+ ++ V D + G +P + NVTIK E P ++
Sbjct: 398 IPTIKNIHIENVTVEDGGKYGILIQGREENPVKNVTFKNVTIKKAEMPMRVE 449
>gi|430821816|ref|ZP_19440403.1| polygalacturonase [Enterococcus faecium E0045]
gi|430830077|ref|ZP_19448143.1| polygalacturonase [Enterococcus faecium E0269]
gi|430921162|ref|ZP_19485329.1| polygalacturonase [Enterococcus faecium E1575]
gi|431703882|ref|ZP_19525108.1| polygalacturonase [Enterococcus faecium E1904]
gi|431766532|ref|ZP_19555009.1| polygalacturonase [Enterococcus faecium E4215]
gi|430438088|gb|ELA48576.1| polygalacturonase [Enterococcus faecium E0045]
gi|430479132|gb|ELA56406.1| polygalacturonase [Enterococcus faecium E0269]
gi|430554055|gb|ELA93727.1| polygalacturonase [Enterococcus faecium E1575]
gi|430596728|gb|ELB34544.1| polygalacturonase [Enterococcus faecium E1904]
gi|430626092|gb|ELB62680.1| polygalacturonase [Enterococcus faecium E4215]
Length = 445
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 179/349 (51%), Gaps = 24/349 (6%)
Query: 88 ADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEP 147
+DGG ++VP G++LTG+ L S+ L++ A+L S D ++P++ + R
Sbjct: 28 SDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVH 82
Query: 148 GGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVT--RPYLIEVMFSDNVQ 205
++S I+ N+ ++ VTG T++G G+ WW +R + N+ RP L+ +
Sbjct: 83 RKVYASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRIT 141
Query: 206 ISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGD 265
+ ++ LI SPSW ++P+ SN LTI P DSPNTDGI+P+SC N RI + +I GD
Sbjct: 142 VKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGD 201
Query: 266 DCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN 325
DC+A+K+G ++ ++ +++ I + + LGSEMSG I+++ +
Sbjct: 202 DCIAIKAGTEDTYERIA--CENITITNCTMVH-GHGGVVLGSEMSGSIRNITISNCIFQE 258
Query: 326 TQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDP---------- 375
T G+R+K+ GRG V++I V + M + F + Y P G +P
Sbjct: 259 TDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPR-GKEPYVWEKTAYPI 317
Query: 376 -KALPTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNVTIKLTE 422
+ P I++ ++ A NV SA + G+ I N+ + + +
Sbjct: 318 DERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQ 366
>gi|430827435|ref|ZP_19445578.1| polygalacturonase [Enterococcus faecium E0164]
gi|430444043|gb|ELA53955.1| polygalacturonase [Enterococcus faecium E0164]
Length = 445
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 179/349 (51%), Gaps = 24/349 (6%)
Query: 88 ADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEP 147
+DGG ++VP G++LTG+ L S+ L++ A+L S D ++P++ + R
Sbjct: 28 SDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVH 82
Query: 148 GGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVT--RPYLIEVMFSDNVQ 205
++S I+ N+ ++ VTG T++G G+ WW +R + N+ RP L+ +
Sbjct: 83 RKVYASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRIT 141
Query: 206 ISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGD 265
+ ++ LI SPSW ++P+ SN LTI P DSPNTDGI+P+SC N RI + +I GD
Sbjct: 142 VKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNYHIDVGD 201
Query: 266 DCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN 325
DC+A+K+G ++ ++ +++ I + + LGSEMSG I+++ +
Sbjct: 202 DCIAIKAGTEDTYERIA--CENITITNCTMVH-GHGGVVLGSEMSGSIRNITISNCIFQE 258
Query: 326 TQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDP---------- 375
T G+R+K+ GRG V++I V + M + F + Y P G +P
Sbjct: 259 TDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPR-GKEPYVWEKTAYPI 317
Query: 376 -KALPTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNVTIKLTE 422
+ P I++ ++ A NV SA + G+ I N+ + + +
Sbjct: 318 DERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQ 366
>gi|326797905|ref|YP_004315724.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548669|gb|ADZ77054.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 485
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 201/406 (49%), Gaps = 56/406 (13%)
Query: 58 VLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
++TDFG VGDG T NT+AF AI +GG +++VP GK+LTG L S+ L++
Sbjct: 69 LITDFGAVGDGLTKNTEAFKKAIEACHN---NGGGRVVVPYGKFLTGGIYLKSNVNLHLA 125
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG-GNATINGQG 176
A ++ S+D S++P++ + R ++S I+ ++ VTG G N
Sbjct: 126 DSATIVFSRDSSDYPIV-----FTRWEGMECMNYASFIYAYGEENIAVTGNGILDGNANN 180
Query: 177 EPWWI-----KY--------------------------RKKQF---NVTRPYLIEVMFSD 202
+ WW KY +K+ F + RP I+
Sbjct: 181 DYWWWWCGAKKYGWREELGKQTPARNALHEMMHEEVDPKKRIFGDGHYLRPNFIQPYQCK 240
Query: 203 NVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIV 262
NV I+++ LI+SP WN++PV NVLI+ + + + PN DG +P++C N I D Y
Sbjct: 241 NVWIADVKLINSPMWNLNPVLCENVLIEKVKVIS--HGPNNDGCDPEACKNVWIRDCYFD 298
Query: 263 SGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRAE-- 319
+GDDC+A+KSG DE G +G P ++ II C+ D + +GSE++GG K++ A
Sbjct: 299 TGDDCIAIKSGRDEDGRNIGRPAENHIIEN--CVMKDGHGGVVIGSEIAGGAKNIYAINC 356
Query: 320 DITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALP 379
++ + N +RIKT+ RG ++ ++++ + + T K + + PG +P
Sbjct: 357 EMDSPNLDRVLRIKTSSSRGGIIENVFMKNVQVGTFKEAAVKCNMF--YEKPG---NHIP 411
Query: 380 TVTGINYRDMVADNVTQSAKL-DGIRNDPFTGICISNVTIKLTEKP 424
T+ I ++ + Q A + + P T + + N +K ++P
Sbjct: 412 TIRNIWVENLNVEKGGQYALMVAAYQQSPVTNLRMINCNLKGIKEP 457
>gi|336415217|ref|ZP_08595558.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
gi|335941250|gb|EGN03108.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
Length = 513
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 189/405 (46%), Gaps = 55/405 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ + G G S T+ N I K +++GG + P G +LT + ++ S+ TLY+
Sbjct: 24 MKELGADPRGIESCTELINQTIE---KASSEGGGTIYFPAGVYLTATIHMKSNITLYVES 80
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A+L S ++ LP + R S LI+ + ++ +TG T+NG G
Sbjct: 81 GAVLRFSDRFEDY--LPFVKI--RWEGTVMNTLSPLIYAHDAENLTITG-RGTLNGNGFK 135
Query: 179 WW---------IK---------------------------YRKKQFN--VTRPYLIEVMF 200
WW IK Y K + RP I+
Sbjct: 136 WWSWEKETRELIKKNGGKLPALNKLQRMWEEANEDLEISDYYKPSLERRMFRPPFIQFYE 195
Query: 201 SDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPID---SPNTDGINPDSCTNTRIE 257
+NV I N+ +++SP W ++P + NV + G+TI P PNTDGINP SC N RI
Sbjct: 196 CNNVLIENVKIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGINPSSCRNVRIS 255
Query: 258 DNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVR 317
D +I GDDC+ +KSG D G K G +++ I + +S + +GSEMSGG++ V
Sbjct: 256 DCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLS-GHGGVVIGSEMSGGVRRVT 314
Query: 318 AEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK---YVFWMTGDYGSHPDPGFD 374
+ T SG+R+K++ GRG V+E+ V + MK ++ ++F + D S +P
Sbjct: 315 ISNCVFDGTDSGIRLKSSRGRGGVVEELRVDNIVMKNIQRNAFIFDLFYDKESKVEPV-- 372
Query: 375 PKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
+ P I+ ++ ++ Q + GI P G+ SN+ +K
Sbjct: 373 SERTPVFRNIHLSNITGSDIKQIGYIKGIEEMPVQGLSFSNINMK 417
>gi|160885582|ref|ZP_02066585.1| hypothetical protein BACOVA_03584 [Bacteroides ovatus ATCC 8483]
gi|299147452|ref|ZP_07040517.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|423290253|ref|ZP_17269102.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|423294451|ref|ZP_17272578.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
gi|156109204|gb|EDO10949.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|298514730|gb|EFI38614.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|392665640|gb|EIY59163.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|392675642|gb|EIY69083.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
Length = 513
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 189/405 (46%), Gaps = 55/405 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ + G G S T+ N I K +++GG + P G +LT + ++ S+ TLY+
Sbjct: 24 MKELGADPRGIESCTELINQTIE---KASSEGGGTIYFPAGVYLTATIHMKSNITLYVES 80
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A+L S ++ LP + R S LI+ + ++ +TG T+NG G
Sbjct: 81 GAVLRFSDRFEDY--LPFVKI--RWEGTVMNTLSPLIYAHDAENLTITG-RGTLNGNGFK 135
Query: 179 WW---------IK---------------------------YRKKQFN--VTRPYLIEVMF 200
WW IK Y K + RP I+
Sbjct: 136 WWSWEKETRELIKKNGGKLPALNKLQRMWEEANEDLEISDYYKPSLERRMFRPPFIQFYE 195
Query: 201 SDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPID---SPNTDGINPDSCTNTRIE 257
+NV I N+ +++SP W ++P + NV + G+TI P PNTDGINP SC N RI
Sbjct: 196 CNNVLIENVKIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGINPSSCRNVRIS 255
Query: 258 DNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVR 317
D +I GDDC+ +KSG D G K G +++ I + +S + +GSEMSGG++ V
Sbjct: 256 DCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLS-GHGGVVIGSEMSGGVRRVT 314
Query: 318 AEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK---YVFWMTGDYGSHPDPGFD 374
+ T SG+R+K++ GRG V+E+ V + MK ++ ++F + D S +P
Sbjct: 315 ISNCVFDGTDSGIRLKSSRGRGGVVEELRVDNIVMKNIQRNAFIFDLFYDKESKVEPV-- 372
Query: 375 PKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
+ P I+ ++ ++ Q + GI P G+ SN+ +K
Sbjct: 373 SERTPVFRNIHLSNITGSDIKQIGYIKGIEEMPVQGLSFSNINMK 417
>gi|375100955|ref|ZP_09747218.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661687|gb|EHR61565.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 462
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/407 (29%), Positives = 198/407 (48%), Gaps = 62/407 (15%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLT-GSFNLTSHFTLYIH 117
+TD+G VGDG T A A++++ + GG ++++PPG W + G L SH L++
Sbjct: 56 VTDYGAVGDGSTDARPAIEAALADMERA---GGGRVVLPPGTWFSAGPIRLRSHVDLHVS 112
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
A L S+D +++ LP +PS G + G +S L+ + DV VTGG I+G E
Sbjct: 113 SGATLRFSEDPADY--LPVVPSRWEGTEMFG--YSPLLHAHRVHDVAVTGG-GLIDGNAE 167
Query: 178 PWWIKYRKKQF------------------------NVTRPYLIEVMFSDNVQISNLTLID 213
+ +R+ Q + RP +++ S +V + +T++D
Sbjct: 168 DGFAAWRELQGEDQQALRRMGKEGVPVEERVFGEGHYLRPSMLQFYESSDVLVEGVTIVD 227
Query: 214 SPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDN-YIVSGDDCVAVKS 272
+P W H +YS ++ ++ +T++ PN DG+ DS ++ +E+N + GDDCV VKS
Sbjct: 228 APMWVNHFIYSDDITVRDVTVKT--HRPNNDGVAIDSSSDVLVENNDFQGIGDDCVVVKS 285
Query: 273 GWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRI 332
G DE G +VG P++++++R +S A+GSEMSGG+ V E T S + I
Sbjct: 286 GRDEDGRRVGRPSENIVVRGN-RMSGTEGGFAIGSEMSGGVNTVFVERNTMDTIGSALYI 344
Query: 333 KTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDY-----GSHPDPGFDPKALPTVTGINYR 387
K + RG V+ + +R +T+ T + V DY G+HP P F R
Sbjct: 345 KANLDRGGVVERVRIRDITVGTAEKVLRFQTDYSGYQGGNHP-PAF-------------R 390
Query: 388 DMVADNVTQSAKLD------GIRNDPFTGICISNVTIKLTEKPKELQ 428
D V +NV D G+ + P + + + + P EL+
Sbjct: 391 DFVVENVRAGIVSDAAITAVGVPSSPVRDVTVRRMWVDQARIPLELK 437
>gi|333897861|ref|YP_004471735.1| polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333113126|gb|AEF18063.1| Polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 518
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 168/324 (51%), Gaps = 20/324 (6%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG VGDGK +T + AI A G ++ P G +LT L S+ T+ + K
Sbjct: 86 VKDFGAVGDGKRLDTFSIQAAI-----MACPDGGRVYFPEGVYLTYPIFLKSNITIELGK 140
Query: 119 DALLLASQDESEWPLLP-PLPS-------YGRGRDEPGGRFSSLIFGTNLTDVVVTGGNA 170
A+LL ++ +P+LP + S G E F+SLI G ++ +V + G +
Sbjct: 141 GAVLLGAKGREMYPILPGEIDSQEFKNGYLGSWEGETNNMFASLITGISVENVNIIG-DG 199
Query: 171 TINGQG--EPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
I+G + WW + K+ RP + + NV I +T+ +SPSW +HP+ S N+
Sbjct: 200 IIDGNSSFDTWWQDAKVKRI-AWRPRTVYLNKCKNVLIEGITIKNSPSWTIHPLMSQNLK 258
Query: 229 IQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHL 288
L I P D+PNTDG++P+SC + I GDDC+A+KSG K+ MP+++L
Sbjct: 259 FVNLNIENPKDAPNTDGLDPESCKDVLIVGTRFSVGDDCIAIKSGKLSVSQKLPMPSENL 318
Query: 289 IIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG--AYVKEIY 346
IIR + + A+ +GSEMSGG+K+V E+ T G+RIKT GRG + EI+
Sbjct: 319 IIRNCL-MEYGHGAVVIGSEMSGGVKNVHVENCIFRKTDRGIRIKTRRGRGKTGVIDEIH 377
Query: 347 VRRMTMKTMKYVFWMTGDYGSHPD 370
+ M+ + F + Y D
Sbjct: 378 ASNIRMEGVLTPFTINSFYFCDAD 401
>gi|399031128|ref|ZP_10731267.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398070597|gb|EJL61889.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 524
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 182/387 (47%), Gaps = 50/387 (12%)
Query: 73 TKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWP 132
T+A AI SK +GG + P G++LTG+ L S+ T+++ ALL S++ ++
Sbjct: 41 TEAIQGAIEKASK---NGGGTIFFPAGEYLTGALKLKSNITIHLDSGALLKFSENFDDY- 96
Query: 133 LLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW------------ 180
LP + G FS L + ++ ++ + G I+GQG+ WW
Sbjct: 97 -LPYVEMRYEGIVMQ--SFSPLFYAKDVENITIKG-RGVIDGQGKAWWNEVYRIETAKGP 152
Query: 181 ---IKYRK--------------------KQFNVTRPYLIEVMFSDNVQISNLTLIDSPSW 217
KY+K K F RP + N+ I +T +SP W
Sbjct: 153 IPETKYQKMWTEQNKGIVYEPYYKRTIDKHF--FRPSFFQAYNCKNILIEGVTFKNSPFW 210
Query: 218 NVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEY 277
++P + NV + G+TI P SPNTDGINP SCTN I + +I GDDC+ +KSG D
Sbjct: 211 TINPEFCDNVTVTGITINNP-HSPNTDGINPSSCTNVHISNCHISVGDDCITIKSGRDAD 269
Query: 278 GIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVG 337
G K G T+++ I +S + +GSEMSGGIK + + T G+RIK A G
Sbjct: 270 GRKYGKATENVTITNCTMLS-GHGGVVIGSEMSGGIKKITISNCVFDGTDRGIRIKAARG 328
Query: 338 RGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDP--KALPTVTGINYRDMVADNVT 395
RG V++I V + MK +K + + +P +P + P I+ ++ NV
Sbjct: 329 RGGVVEDIRVDNIVMKNIKEEAIILDLFYDKDNP-VEPVTERTPIFRNIHISNVTGGNVN 387
Query: 396 QSAKLDGIRNDPFTGICISNVTIKLTE 422
++ + GI P I SN+ + E
Sbjct: 388 KAGFVRGIVEMPIQNITFSNINMDGKE 414
>gi|383122658|ref|ZP_09943350.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
gi|251842244|gb|EES70324.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
Length = 445
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 185/408 (45%), Gaps = 52/408 (12%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R + G +GK NTK N+ I L++ GG L P G +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKALNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 76
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL + A LL S + ++ LP + G F LI+ + ++ + G T+
Sbjct: 77 TLELEAGATLLFSDNFDDY--LPFVEVRHEGVMMKS--FQPLIYAVDAENITIKG-EGTL 131
Query: 173 NGQGEPWWIKYRKKQFNVT----------------------------------------R 192
+GQG+ WW+++ + ++ R
Sbjct: 132 DGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAQNDTTAIYAETNKDYVSTLQRRFFR 191
Query: 193 PYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCT 252
P I+ + V+I + +++SP W V+P + NV I+G+TI + SPNTDGINP+SC
Sbjct: 192 PPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITINN-VPSPNTDGINPESCR 250
Query: 253 NTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGG 312
N I D +I GDDC+ +KSG D ++G+P +++ I +S + +GSEMSG
Sbjct: 251 NVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS-GHGGVVIGSEMSGS 309
Query: 313 IKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDP 371
++ V + T G+RIK+ GRG V++I V + M +K + Y P
Sbjct: 310 VRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVVLNLKYSQMPAE 369
Query: 372 GFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
+ P ++ M +V K+ G+ P I + ++ I+
Sbjct: 370 AKSERT-PIFRNVHISGMTVTDVKTPIKIVGLEEAPIFDIVLRDIHIQ 416
>gi|292494258|ref|YP_003533401.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|448289466|ref|ZP_21480637.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|291369174|gb|ADE01404.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|445582547|gb|ELY36888.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
Length = 549
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 192/386 (49%), Gaps = 41/386 (10%)
Query: 64 GVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLL 123
G+ D + +T A A+ + A +GG ++ +PPG + + + T + A L
Sbjct: 49 GIEDDDSLDTAAIQAALDDC---AGEGG-EVYLPPGTYRSAPLRVGDDTTFRLANGAELR 104
Query: 124 ASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW--- 180
QD +E+P + S G D+ G F + + ++V +TG I+G G WW
Sbjct: 105 FVQDFTEFPTVE---SRWEGWDQDG--FHPCLHVADASNVTITG-EGVIDGGGSYWWVFV 158
Query: 181 -----------------IKYRKKQFNVT----RPYLIEVMFSDNVQISNLTLIDSPSWNV 219
I+ +Q V+ RP L+++ +NV +S +TL +SP WN
Sbjct: 159 SLPPEQYPSELAARLEEIRSGNQQDEVSTFTVRPPLLQIDGCENVTVSGVTLRNSPFWNT 218
Query: 220 HPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGI 279
H VYS +V I ++I+ P D+PN DGI+ DS R+ D +I +GDD + +KSG DE G
Sbjct: 219 HVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEQGR 278
Query: 280 KVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG 339
+VG PT+++++ + + +GSE +G ++ V + T +T G+RIK+ GRG
Sbjct: 279 EVGRPTENVVVTNC-TVEHGHGGVVIGSETAGDVRHVTVTNCTFTDTDRGIRIKSKRGRG 337
Query: 340 AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPK----ALPTVTGINYRDMVADNVT 395
V+++ + M+ + F + G Y + D DPK A P V +++ + A+ V
Sbjct: 338 GTVEDLRFDTIIMRRVACPFVINGYYQTDIDS--DPKPVTEATPNVRNVDFHHITAEEVE 395
Query: 396 QSAKLDGIRNDPFTGICISNVTIKLT 421
+A L G+ F GI ++V I T
Sbjct: 396 SAAFLAGLPEQRFEGISFTDVDIDAT 421
>gi|294617477|ref|ZP_06697109.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1679]
gi|291596284|gb|EFF27545.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1679]
Length = 363
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 170/324 (52%), Gaps = 23/324 (7%)
Query: 88 ADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEP 147
+DGG ++VP G++LTG+ L S+ L++ A+L S D ++P++ + R
Sbjct: 28 SDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVH 82
Query: 148 GGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVT--RPYLIEVMFSDNVQ 205
++S I+ N+ ++ VTG T++G G+ WW +R + N+ RP L+ +
Sbjct: 83 RKVYASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRIT 141
Query: 206 ISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGD 265
+ ++ LI SPSW ++P+ SN LTI P DSPNTDGI+P+SC N RI + +I GD
Sbjct: 142 VKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGD 201
Query: 266 DCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN 325
DC+A+K+G ++ ++ +++ I + + LGSEMSG I+++ +
Sbjct: 202 DCIAIKAGTEDTYERIA--CENITITNCTMVH-GHGGVVLGSEMSGSIRNITISNCIFQE 258
Query: 326 TQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDP---------- 375
T G+R+K+ GRG V++I V + M + F + Y P G +P
Sbjct: 259 TDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPR-GKEPYVWEKTAYPI 317
Query: 376 -KALPTVTGINYRDMVADNVTQSA 398
+ P I++ ++ A NV SA
Sbjct: 318 DERTPAFRRIHFSNITARNVHASA 341
>gi|395803712|ref|ZP_10482956.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434266|gb|EJG00216.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 492
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 209/436 (47%), Gaps = 67/436 (15%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG V DGKT NT AF AI + AA+GG +++VP GK+LTG+ +L S+ L++
Sbjct: 73 INDFGAVADGKTLNTLAFQKAIQ---ECAANGGGRVLVPNGKYLTGAIHLESNVNLHLED 129
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A +L S + ++P++ + +S LI+ N T++ +T G T+NGQ +
Sbjct: 130 HAEILFSLNPKDYPIV-----HTSWEGTEVMNYSPLIYAKNKTNIAIT-GKGTLNGQADS 183
Query: 179 --WWIKYRKKQF------------------------------------NVTRPYLIEVMF 200
WWI K + RP IE
Sbjct: 184 TNWWIWSGGKNYGWKKGIPSQNDPTNREVLVDMAEKGIPVSERVFGDGRYLRPNFIEFFE 243
Query: 201 SDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNY 260
+ + ++ +I+SP W +HP+ ++N++I G+T+ + PN DG +P+ N I +
Sbjct: 244 CNTALVKDIKIINSPFWILHPIKTNNMIIDGVTVNS--HGPNNDGCDPEYSQNILIRNCT 301
Query: 261 IVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAED 320
+GDDC+A+K+G D G +V +P++++I++ I + +GSE+S G+ +V E+
Sbjct: 302 FNTGDDCIAIKAGRDGDGRRVAIPSKNIIVQNCKMID-GHGGVVIGSEISAGVNNVFVEN 360
Query: 321 --ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY------VFWMTGDYGSHPDPG 372
+ + N +RIKT RG ++ IYVR + + T+K +F+ YGS
Sbjct: 361 CVMDSPNLDRAIRIKTNSRRGGIIENIYVRNLEVGTVKECVLKLNMFYNV--YGSQTG-- 416
Query: 373 FDPKALPTVTGINYRDMVADNVTQ-SAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNC 431
+PT+ ++ ++ N + S +G P I + NV I+ + L+ N
Sbjct: 417 ---NFIPTIRNVSLENVTVKNGGKYSVWAEGYAESPVENITLKNVKIQKVDSLYLLK-NV 472
Query: 432 TNIQGITSRVTPQACE 447
NI I + + + E
Sbjct: 473 KNINFINTYINEKKVE 488
>gi|448567657|ref|ZP_21637582.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax prahovense
DSM 18310]
gi|445711655|gb|ELZ63445.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax prahovense
DSM 18310]
Length = 549
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 192/386 (49%), Gaps = 41/386 (10%)
Query: 64 GVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLL 123
G+ D + +T A A+ + A +GG ++ +PPG + + + T + A L
Sbjct: 49 GIEDDDSLDTAAIQAALDDC---AGEGG-EVYLPPGTYRSAPLRVGDDTTFRLANGAELR 104
Query: 124 ASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW--- 180
QD +E+P + S G D+ G F + + ++V +TG I+G G WW
Sbjct: 105 FVQDFTEFPTVE---SRWEGWDQDG--FHPCLHVADASNVTITG-EGIIDGGGSYWWEFV 158
Query: 181 -----------------IKYRKKQFNVT----RPYLIEVMFSDNVQISNLTLIDSPSWNV 219
I+ +Q V+ RP L+++ +NV +S +TL +SP WN
Sbjct: 159 SLPPEQYPSELAARLEEIRSGNQQDEVSTFTVRPPLLQIDGCENVTVSGVTLRNSPFWNT 218
Query: 220 HPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGI 279
H VYS +V I ++I+ P D+PN DGI+ DS R+ D +I +GDD + +KSG DE G
Sbjct: 219 HVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEQGR 278
Query: 280 KVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG 339
+VG PT+++++ + + +GSE +G ++ V + T +T G+RIK+ GRG
Sbjct: 279 EVGRPTENVVVTNC-TVEHGHGGVVIGSETAGDVRHVTVTNCTFTDTDRGIRIKSKRGRG 337
Query: 340 AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPK----ALPTVTGINYRDMVADNVT 395
V+++ + M+ + F + G Y + D DPK A P V +++ + A+ V
Sbjct: 338 GTVEDLRFDTIIMRRVACPFVINGYYQTDIDS--DPKPVTEATPNVRNVDFHHITAEEVE 395
Query: 396 QSAKLDGIRNDPFTGICISNVTIKLT 421
+A L G+ F GI ++V I T
Sbjct: 396 SAAFLAGLPEQRFEGISFTDVDIDAT 421
>gi|218187051|gb|EEC69478.1| hypothetical protein OsI_38684 [Oryza sativa Indica Group]
Length = 365
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/266 (35%), Positives = 146/266 (54%), Gaps = 2/266 (0%)
Query: 182 KYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSP 241
++ FN+T +L + D V I + + P P Y + + G R+ I+
Sbjct: 76 RWLTGSFNLTS-HLTIFLEKDAVIIGAKEVSEWPIVEPLPSYGQGIDLPGARHRSLINGH 134
Query: 242 N-TDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS 300
N TD + DSC+N IED+ I D +++KSGWD YGI +G P + I R+ +
Sbjct: 135 NVTDVVITDSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVDLQASLG 194
Query: 301 AAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFW 360
AA+A GSEMSGGI D+ + + + G+ KTA GRG Y++++ + + M+ +
Sbjct: 195 AALAFGSEMSGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQMEDVNVAIK 254
Query: 361 MTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKL 420
TGD+ +HPD FDP ALP + I ++MV N++ + L GI DPFT IC+SN++ L
Sbjct: 255 FTGDWSTHPDNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNICLSNISFSL 314
Query: 421 TEKPKELQWNCTNIQGITSRVTPQAC 446
+ + W+C+NI G + V P+ C
Sbjct: 315 ADSTQSSSWSCSNISGYSELVFPEPC 340
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 83/112 (74%)
Query: 55 HSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTL 114
HS +++FG VGDG T NT F AI L +A GGAQL VP G+WLTGSFNLTSH T+
Sbjct: 31 HSVTISEFGAVGDGVTVNTLPFQNAIFYLRSFADKGGAQLYVPRGRWLTGSFNLTSHLTI 90
Query: 115 YIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVT 166
++ KDA+++ +++ SEWP++ PLPSYG+G D PG R SLI G N+TDVV+T
Sbjct: 91 FLEKDAVIIGAKEVSEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVIT 142
>gi|194015552|ref|ZP_03054168.1| glycoside hydrolase [Bacillus pumilus ATCC 7061]
gi|194012956|gb|EDW22522.1| glycoside hydrolase [Bacillus pumilus ATCC 7061]
Length = 463
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 198/409 (48%), Gaps = 59/409 (14%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ +G G +T A +AI + + G ++++P G ++TG+ L SH L++H+
Sbjct: 56 VVHYGADAKGTELSTDAIQSAIDDAHRLK---GGRVLIPEGTFVTGALELKSHVELHLHE 112
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A + SQ+ ++ LP + + G + +S LI+ + ++ +TG T++G+G+
Sbjct: 113 KAYVAFSQNRKDY--LPLVLTRYEGVELYN--YSPLIYAHHAENIAITGA-GTLDGRGDE 167
Query: 179 --WW-IKY---------RKKQF-------------------NVTRPYLIEVMFSDNVQIS 207
WW KY R +Q + R I+ V I
Sbjct: 168 HHWWPWKYGTNGQPSQDRDRQLLFDMAEKRIPVEERVFGEGHYLRSSFIQPYQCQQVLIE 227
Query: 208 NLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDC 267
+T+ DSP W +HPV S V+++G+ I PNTDG+NP+SC N IED Y +GDDC
Sbjct: 228 GVTVKDSPMWQIHPVLSELVIVRGVHIIG--HGPNTDGVNPESCRNVLIEDCYFDNGDDC 285
Query: 268 VAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAED--ITAIN 325
+A+KSG +E G ++G+P+++++IRR + + +GSE+SGG++ + AE+ + + N
Sbjct: 286 IAIKSGRNEDGRRIGIPSENIVIRRN-EMRDGHGGVTIGSEISGGVRYIYAENNVMDSPN 344
Query: 326 TQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY------VFWMTGDYGSHPDPGFDPKALP 379
+RIKT RG ++ IY + T+K++K+ + + GD G H P
Sbjct: 345 LDRALRIKTNSVRGGTIEHIYFKNNTVKSLKHEVVCIDMMYEEGDAGPH---------RP 395
Query: 380 TVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQ 428
V I + + K+ + P T + N I P L+
Sbjct: 396 VVRHIQVEGLKSSGGRYGVKIAAYSHSPVTNFNMKNCVIDHVTYPLSLE 444
>gi|414864495|tpg|DAA43052.1| TPA: hypothetical protein ZEAMMB73_419161 [Zea mays]
Length = 216
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 75/121 (61%), Positives = 95/121 (78%)
Query: 47 FQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSF 106
+ CRKH A +T++G VGDG+T NT AF A+++L++ A DGGA L+VPPGKWLTG F
Sbjct: 35 YAGPGCRKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPF 94
Query: 107 NLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVT 166
NLTS FTLY+ + A +LASQD WPL+ PLPSYGRGRDEPG R+S+ I G+NLTDV++T
Sbjct: 95 NLTSCFTLYLDEGAEILASQDMKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIIT 154
Query: 167 G 167
G
Sbjct: 155 G 155
>gi|311748289|ref|ZP_07722074.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
gi|126576785|gb|EAZ81033.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
Length = 557
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 170/348 (48%), Gaps = 68/348 (19%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ ++G VGDG T+N++AF AI +S GG +++VP G WLTG L + L++
Sbjct: 53 IMEYGAVGDGLTNNSQAFKAAIEEVSN---QGGGKVLVPRGIWLTGPITLLDNVNLHLED 109
Query: 119 DALLLASQDESEWPLLPP----LPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATING 174
+L+ S+++ E+PL+ L ++ R S I + ++ +TG N TI+G
Sbjct: 110 GSLITFSKNKDEYPLVETSFEGLNTF---------RCLSPINAYRVENIAITG-NGTIDG 159
Query: 175 QGEPWWIKYRKKQ-----------------------------------FNV--------- 190
GE W R K FNV
Sbjct: 160 SGEAWRAVKRSKMTDSQWNELVSSGGIVVGTNWFPSQSFLDGHNASSSFNVPDVTDRKEL 219
Query: 191 ------TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTD 244
RP ++ + S V + T +SP+WN+HP+ S +V+I+ LT+R P S N D
Sbjct: 220 EKMKDFLRPVMVSIRESKRVLLDGPTFQNSPAWNIHPLMSEDVIIRNLTVRNPWFSQNGD 279
Query: 245 GINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIA 304
G++ +SC N I +N GDD + KSG D G + GMPT+++I++ I +
Sbjct: 280 GLDLESCKNVLIYNNTFDVGDDAICFKSGKDSDGRERGMPTENVIVKNNI-VYHGHGGFT 338
Query: 305 LGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+GSEMSGGIK+V + T + T G+R K+ GRG V+ I++ ++ M
Sbjct: 339 VGSEMSGGIKNVHVSNCTFMGTDVGLRFKSTRGRGGVVENIWISKINM 386
>gi|381180485|ref|ZP_09889325.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
gi|380767666|gb|EIC01665.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
Length = 453
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 159/327 (48%), Gaps = 43/327 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFGG GDGK +N+ AF A + +S+ +GG +L VP G W +G + S TL + +
Sbjct: 6 IDDFGGKGDGKFNNSNAFALAFAEISR---NGGGKLTVPKGVWASGPIEIPSDTTLELEE 62
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+ + D + + P + R L+ ++ +V +TG T+NG GE
Sbjct: 63 GSEISFIPDPNLY-----TPVFTRWEGVECFAMHPLVLSSHTKNVRITG-KGTLNGNGET 116
Query: 179 WW-IKYRKKQ--------------------------------FNVTRPYLIEVMFSDNVQ 205
WW +K KK+ RP L+E+ F++NV
Sbjct: 117 WWNLKKAKKERGQSAPEDMYEKILAELNPGYENQPGGGGGREIQFLRPSLLEISFAENVS 176
Query: 206 ISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGD 265
+ + + DSP W VHP+Y N+ ++G+ I P +PNTDGI+ DSC N IED ++ GD
Sbjct: 177 VEGIEIKDSPFWTVHPLYVKNLTLRGIKIDNPYTAPNTDGIDVDSCENVVIEDCFVSVGD 236
Query: 266 DCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN 325
D + +KSG GI+ PT ++ IR + I +GSE + G+ + A
Sbjct: 237 DGICIKSGSGPDGIRCAKPTVNVEIRNCT-VRNAHGGIVIGSETAAGMSHIHAVGCDLSG 295
Query: 326 TQSGVRIKTAVGRGAYVKEIYVRRMTM 352
T G+RIK+ GRG + +I +R M M
Sbjct: 296 TDRGIRIKSRRGRGGDIFDIELRDMVM 322
>gi|420156232|ref|ZP_14663077.1| pectate lyase family protein [Clostridium sp. MSTE9]
gi|394757879|gb|EJF40876.1| pectate lyase family protein [Clostridium sp. MSTE9]
Length = 511
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 123/423 (29%), Positives = 196/423 (46%), Gaps = 48/423 (11%)
Query: 27 GLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKY 86
GL P A R + + I + D+ GDG ++T A + AI Y
Sbjct: 62 GLGEPAAATIRTERCGFAIHIK------------DYNAAGDGIRNDTAAIHAAI-----Y 104
Query: 87 AADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRD- 145
+A + +I P G++L L S LY+ + A+L + + L + Y + D
Sbjct: 105 SAPPRSVVIFPRGEYLVEHLFLKSGVDLYLEEGAVLRQNPNRDA---LAIVKGYQKSYDY 161
Query: 146 -----------EPGGRFSSLIFGTNLTDVVVTGGNATINGQG-EPWWIKYRKKQFNVTRP 193
P F SLI+G ++ V + G + T+NG G E W KK+ RP
Sbjct: 162 TDAVINASWEGNPLDCFCSLIYGKDVQQVRIYG-DGTLNGSGMEGGWWNEPKKKNRAYRP 220
Query: 194 YLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTN 253
+ ++ ++ + LT +S +WN+HP+YSSN+ GLTI++ DSPNTDG+NP+SC N
Sbjct: 221 RNVSLVNCSDITVCGLTSQNSAAWNIHPLYSSNLAFYGLTIQSDPDSPNTDGLNPESCEN 280
Query: 254 TRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGI 313
I GDDC+A+KSG + P++ + +RR + + + +GSE+S G+
Sbjct: 281 VEIVGCRFQVGDDCIAIKSGKLFLSRRHLRPSRKITVRRCL-MEEGHGGVVIGSEISCGV 339
Query: 314 KDVRAEDITAINTQSGVRIKTAVGRG--AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDP 371
+DV ++ T G RIKT GRG + V + + M+ + + F + Y PD
Sbjct: 340 QDVLVQNCLFRRTDRGFRIKTRRGRGSTSVVDGVRFSHVKMEQVSHCFVINMFYHCDPDG 399
Query: 372 GFD----PKAL------PTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNVTIKL 420
D +AL P V I D+ AD + SA L G+ P + + N +
Sbjct: 400 HSDLVQCKEALPVGAETPAVQNITLSDICADEIAGSAVFLYGLPESPIRNVTVKNSRFRF 459
Query: 421 TEK 423
++
Sbjct: 460 AQQ 462
>gi|409100257|ref|ZP_11220281.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 557
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 204/440 (46%), Gaps = 77/440 (17%)
Query: 47 FQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSF 106
+ +N + + + FG GDG + NT++ N AI+ +S+ GG +++P G WLTG
Sbjct: 37 IKQVNIKADTTSIVSFGAKGDGVSMNTESINKAIAAVSQ---KGGGVVLIPGGLWLTGPI 93
Query: 107 NLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVT 166
L S+ L++ +DALL + D +++ L+ G +P R S I GT+L ++ +T
Sbjct: 94 ELKSNVNLHLKRDALLQFTDDFNQYKLVE-----GNWEGQPAWRNQSPISGTDLQNIAIT 148
Query: 167 GGNATINGQGEPWWIKYR----------------------------KKQF---------- 188
G + I+G G W + R +K F
Sbjct: 149 G-SGIIDGNGGAWRMVKRDKLTESQWKKLTTSGGLVSEDGKMWYPSEKTFKGSKTKNAGV 207
Query: 189 --------------NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTI 234
+ RP L+ + + + +T +SP+WN+HP+ ++ ++ L +
Sbjct: 208 VAAGQSAADLQSIKDFLRPNLLVLTNCKQILLEGVTFQNSPAWNLHPLLCEDLTLRNLQV 267
Query: 235 RAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLI 294
+ P + N DG++ +SC N IE + GDD + +KSG DE G K G PT+++IIR +
Sbjct: 268 KNPWFAQNGDGVDVESCKNVLIEGSTFDVGDDGICIKSGRDEAGRKRGKPTENVIIRNNV 327
Query: 295 CISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKT 354
+ +GSEMSGG K++ D + I T G+R KT GRG V++IY+ + M
Sbjct: 328 VYHAHGGFV-VGSEMSGGAKNIWVYDCSFIGTDIGIRFKTTRGRGGVVEDIYINNINMID 386
Query: 355 MKYVFWMTGDYGSHPDP----GFDPKALPTVT-----------GINYRDMVADNVTQSAK 399
+ + Y + DP G +A+ TV I +D+VA+ ++
Sbjct: 387 IPGEAILFDMYYAAVDPIVLAGEKREAIKTVVVPVTEATPQFKNIYIKDVVANGAEKAIF 446
Query: 400 LDGIRNDPFTGICISNVTIK 419
+ G+ I + NVTI+
Sbjct: 447 VRGLPEMNIKDIYLENVTIQ 466
>gi|261207232|ref|ZP_05921921.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium TC 6]
gi|289567172|ref|ZP_06447562.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium D344SRF]
gi|294614352|ref|ZP_06694269.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1636]
gi|430850281|ref|ZP_19468044.1| polygalacturonase [Enterococcus faecium E1185]
gi|260078860|gb|EEW66562.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium TC 6]
gi|289161031|gb|EFD08941.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium D344SRF]
gi|291592824|gb|EFF24416.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1636]
gi|430535906|gb|ELA76297.1| polygalacturonase [Enterococcus faecium E1185]
Length = 445
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 180/349 (51%), Gaps = 24/349 (6%)
Query: 88 ADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEP 147
+DGG ++VP G++LTG+ L S+ L++ A+L S D ++P++ + R
Sbjct: 28 SDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVH 82
Query: 148 GGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVT--RPYLIEVMFSDNVQ 205
++ I+ N+ ++ VTG T++G G+ WW +R + N+ RP L+ +
Sbjct: 83 RKVYAFCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRIT 141
Query: 206 ISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGD 265
+ ++ LI SPSW ++P+ SN LTI P DSPNTDGI+P+SC N RI + +I GD
Sbjct: 142 VKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGD 201
Query: 266 DCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN 325
DC+A+K+G ++ ++ +++ I + + LGSEMSG I+++ +
Sbjct: 202 DCIAIKAGTEDTYERIA--CENITITNCTMVH-GHGGVVLGSEMSGSIRNITISNCIFQE 258
Query: 326 TQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-----YVFWMTGDYGSHPDPGFDPKAL-- 378
T G+R+K+ GRG V++I V + M + +++ G G P ++ KA
Sbjct: 259 TDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYV-WEKKAYPI 317
Query: 379 ----PTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNVTIKLTE 422
P I++ ++ A NV SA + G+ I N+ + + +
Sbjct: 318 DERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQ 366
>gi|336431286|ref|ZP_08611139.1| hypothetical protein HMPREF0991_00258 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336019012|gb|EGN48745.1| hypothetical protein HMPREF0991_00258 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 519
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 178/365 (48%), Gaps = 31/365 (8%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG GDG +T AI + + +++++P G + S L H T+ + K
Sbjct: 83 VRDFGAKGDGVQDDTTYIQAAIMSCPR-----NSRVLIPEGTYRVTSLFLKDHLTMELAK 137
Query: 119 DALLLASQDESEWPLLPPLPS---------YGRGRDEPGGRFSSLIFGTNLTDVVVTGGN 169
A+L A + + +L G E F+ ++ G + DV + G
Sbjct: 138 GAVLSAYTERERFSILRGTYQSEDQENEYILGTWEGEAQNMFAGIMNGIGIKDVTICG-E 196
Query: 170 ATINGQG--EPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNV 227
TI+G E WW+ ++ + RP +I + ++V I+ +T+ +SPSWN+HP + S++
Sbjct: 197 GTIDGNASWENWWLDAKEVR-GAARPRMIFLNRCEDVTITGITVQNSPSWNIHPYFCSHL 255
Query: 228 LIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQH 287
G+T+ P SPNTDG+NP+SC + I GDDC+AVK+G G K +P+ +
Sbjct: 256 KFIGVTVLGPKVSPNTDGLNPESCDDVEITGCLFSVGDDCIAVKAGKISVGAKYKVPSSN 315
Query: 288 LIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG--AYVKEI 345
+ IR+ C+ +I LGSEM+ GIK+++A +NT G+RIKT GRG A + I
Sbjct: 316 IRIRQC-CMRDGHGSITLGSEMAAGIKNLQARQCVFLNTDRGLRIKTRRGRGKDAVIDGI 374
Query: 346 YVRRMTMKTMKYVFWMTGDYGSHPD----------PGFDPKALPTVTGINYRDMVADNVT 395
+ M ++ F + Y PD P + P + + +R++ A N
Sbjct: 375 LFEDIRMDSVLTPFVINSFYFCDPDGHSEYVQCKEPLAVDERTPQIKELCFRNIQAKNCH 434
Query: 396 QSAKL 400
+A
Sbjct: 435 VAAAF 439
>gi|298385760|ref|ZP_06995318.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298261901|gb|EFI04767.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 445
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 185/408 (45%), Gaps = 52/408 (12%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R + G +GK NTK N+ I L++ GG L P G +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKALNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 76
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
TL + A LL S + ++ LP + G F LI+ + ++ + G T+
Sbjct: 77 TLELEAGATLLFSDNFDDY--LPFVEVRHEGVMMKS--FQPLIYAVDAENITIKG-EGTL 131
Query: 173 NGQGEPWWIKYRKKQFNVT----------------------------------------R 192
+GQG+ WW+++ + ++ R
Sbjct: 132 DGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAQNDTTAIYAETNKDYVSTLQRRFFR 191
Query: 193 PYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCT 252
P I+ + V+I + +++SP W V+P + NV I+G+TI + SPNTDGINP+SC
Sbjct: 192 PPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITINN-VPSPNTDGINPESCR 250
Query: 253 NTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGG 312
N I D +I GDDC+ +KSG D ++G+P +++ I ++ + +GSEMSG
Sbjct: 251 NVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLA-GHGGVVIGSEMSGS 309
Query: 313 IKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDP 371
++ V + T G+RIK+ GRG V++I V + M +K + Y P
Sbjct: 310 VRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVVLNLKYSQMPAE 369
Query: 372 GFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
+ P ++ M + K+ G+ P + I + ++ I+
Sbjct: 370 AKSERT-PIFRNVHISGMTVTDAKTPIKIVGLEEAPISDIVLRDIHIQ 416
>gi|325570664|ref|ZP_08146390.1| polygalacturonase [Enterococcus casseliflavus ATCC 12755]
gi|325156510|gb|EGC68690.1| polygalacturonase [Enterococcus casseliflavus ATCC 12755]
Length = 438
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 182/365 (49%), Gaps = 25/365 (6%)
Query: 73 TKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWP 132
T+A I L + GG ++ G++ TG+ L S+ L++ A L+ S D ++P
Sbjct: 18 TEAIQEKIDELHQ---QGGGRITFSAGRYPTGALFLKSNIELHLLLGATLVFSDDPKDYP 74
Query: 133 LLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYR--KKQFNV 190
++ R ++S ++ N ++ VTG ++GQG+ WW +R ++Q
Sbjct: 75 VV-----VSRWEGVKREVYASCLYAENAENIAVTG-LGMLDGQGQRWWKTFRENREQLAY 128
Query: 191 TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDS 250
RP LI + + ++ L+DSPSW V+P+ N+ I L I+ P DSPNTDGI+P+S
Sbjct: 129 PRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQNLTIDNLRIKNPADSPNTDGIDPES 188
Query: 251 CTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMS 310
C N RI + +I GDDC+A+KSG ++ +V ++ ++ A+ LGSEMS
Sbjct: 189 CKNVRISNCHIDVGDDCIAIKSGTEDTKERVACENITIVNCHML---HGHGAVVLGSEMS 245
Query: 311 GGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHP- 369
G I++V + +T GVR+K+ GRG +++I V + M + F + Y P
Sbjct: 246 GDIRNVTISNCIFQDTDRGVRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFCGPK 305
Query: 370 ---------DPGFDPKALPTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNVTIK 419
+P + P I++ ++ A NV +A + G+ + I ++ +
Sbjct: 306 GKEKYVWDKNPYPITEETPHFRRIHFANISARNVHAAAGFVYGLAEQFISDITFQDIAVS 365
Query: 420 LTEKP 424
+ E P
Sbjct: 366 MAEHP 370
>gi|224536550|ref|ZP_03677089.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521806|gb|EEF90911.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
Length = 462
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 216/425 (50%), Gaps = 53/425 (12%)
Query: 58 VLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGK-WLTGSFNLTSHFTLYI 116
V+TDFG VGDGKT +AF AI+ S +GG ++ VP G ++ G S+ +++
Sbjct: 48 VITDFGAVGDGKTLCKEAFEKAITICSD---NGGGKITVPAGTYYMNGPLVFKSNVNVHL 104
Query: 117 HKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG 176
K A+L S +ES++ LP + + G + +S LI+ ++ ++ +T G T+NG G
Sbjct: 105 EKGAILDFSTNESDY--LPAVITRWEGTEL--FNYSPLIYAYHVQNIALT-GEGTVNGNG 159
Query: 177 ----EPW--------WIKYRKKQFNV------------TRPYLIEVMFSDNVQISNLTLI 212
PW + + + NV RP IE NV+I +T++
Sbjct: 160 SKKFSPWNNIQTVEQEMLRKMGRTNVPVYRRIFGEGYKLRPGFIEPFGCANVRIEGVTIM 219
Query: 213 DSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKS 272
DSP W +HP++ +NV+++ +T+ + + N DG +P+SC N IE +GDD +A+KS
Sbjct: 220 DSPFWVIHPIFCNNVIVRNVTVDS--HNYNNDGCDPESCRNVLIEGCTFSTGDDAIAIKS 277
Query: 273 GWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRI 332
G D ++G PT++++IR + +GSE++GG++++ E+IT + + +
Sbjct: 278 GRDNDAWRIGQPTENVVIRNC-SFRSKINGVCIGSEIAGGVRNIFIENITIPKSSNAIYF 336
Query: 333 KTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKAL-PTVTGINYRDMVA 391
K+ + RGAY++++YVR + T++ T P+ + A PT+ + +
Sbjct: 337 KSNLDRGAYIQDVYVRNVQADTVR-----TALIRFEPNYKGERSAFHPTL----FDSFLI 387
Query: 392 DNVT--QSAK----LDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQA 445
+NVT QS + + G P I + NVTI P Q N NI+ + +V +
Sbjct: 388 ENVTCKQSNECGIYMAGFAERPLQNIVLKNVTIGKVPTPYCFQ-NGENIRFQSVKVNGKK 446
Query: 446 CELLP 450
+ P
Sbjct: 447 LDEKP 451
>gi|325300479|ref|YP_004260396.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
gi|324320032|gb|ADY37923.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
Length = 493
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 139/495 (28%), Positives = 219/495 (44%), Gaps = 93/495 (18%)
Query: 20 LSTLLTLGLLSPQVAECRPTKNSYTIE------------FQALNCRKHSAVLTDFGGVGD 67
L+TLL G+ + +A C+PT+ Y E +A + + L+DFG VGD
Sbjct: 3 LTTLLACGM-AAFLASCQPTE-EYKYESLYADLPFEMPRVEAPSFPDNEVNLSDFGAVGD 60
Query: 68 GKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQD 127
G T+AF AI LS+ GG +L VP G W TG L S+ L++ K A++L S D
Sbjct: 61 GTQLCTEAFARAIDALSQ---KGGGRLTVPAGVWFTGPIVLKSNINLHVEKGAVILFSPD 117
Query: 128 ESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPW-------- 179
+PL+ + G D R S I G NLT+V +TG A I+G G W
Sbjct: 118 IDLYPLVE---TVFEGLDTR--RCQSPISGRNLTNVAITGQGA-IDGNGHFWRPLKRQKV 171
Query: 180 --------------------WIKY-------------------RKKQFNVTRPYLIEVMF 200
W Y ++++ RP+L VM
Sbjct: 172 TESQWKAATSRGGVYKRADYWFPYPGTLKGDTISNMNVPQNLKTEEEWQSIRPFLRPVMV 231
Query: 201 S----DNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRI 256
S NV + + +SP+WN+HP+ NVLI+ + +R P + N DG++ +SC N I
Sbjct: 232 SLIECKNVWLEGVIFQNSPAWNLHPLMCENVLIENVEVRNPSYAQNGDGLDLESCRNALI 291
Query: 257 EDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDV 316
++ GDD + +KSG DE G + P +++I+ + +GSEMSGG+++V
Sbjct: 292 VNSTFDVGDDGICLKSGKDEDGRRRARPCENVIVDGCT-VFKGHGGFVVGSEMSGGVRNV 350
Query: 317 RAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM-----KTMKYVFWMTGDYG----- 366
+ + T G+R K+ GRG V+ I+VR ++M + + + + G
Sbjct: 351 SVSNCQFLGTDVGLRFKSKRGRGGVVENIWVRNVSMIDIATEPVTFNLYYGGKSAVEVLE 410
Query: 367 -SHPDPGFDP-----KALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKL 420
P P + P I+ + ++ +GI P GI + +V I+
Sbjct: 411 SGEVVPAEVPAMPVDETTPCFRNIHIERLTCAGARRAMYFNGIPEMPIDGITLKHVRIRA 470
Query: 421 TEKPKELQWNCTNIQ 435
E E ++ C N+
Sbjct: 471 RED-AEFRY-CKNVH 483
>gi|430860956|ref|ZP_19478551.1| polygalacturonase [Enterococcus faecium E1573]
gi|430551274|gb|ELA91043.1| polygalacturonase [Enterococcus faecium E1573]
Length = 445
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 180/349 (51%), Gaps = 24/349 (6%)
Query: 88 ADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEP 147
+DGG ++VP G++LTG+ L S+ L++ A+L S D ++P++ + R
Sbjct: 28 SDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVH 82
Query: 148 GGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVT--RPYLIEVMFSDNVQ 205
++S I+ N+ ++ VTG T++G + WW +R + N+ RP L+ +
Sbjct: 83 RKVYASCIYAQNVENISVTGF-GTLDGNEKKWWHTFRNEPDNLAYPRPKLMSFHNCHRIT 141
Query: 206 ISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGD 265
+ ++ LI SPSW ++P+ SN LTI P DSPNTDGI+P+SC N RI + +I GD
Sbjct: 142 VKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGD 201
Query: 266 DCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN 325
DC+A+K+G ++ ++ +++ I + + LGSEMSG I+++ +
Sbjct: 202 DCIAIKAGTEDTYERIA--CENITITNCTMVH-GHGGVVLGSEMSGSIRNITISNCIFQE 258
Query: 326 TQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-----YVFWMTGDYGSHPDPGFDPKAL-- 378
T G+R+K+ GRG V++I V + M + +++ G G P ++ KA
Sbjct: 259 TDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYV-WEKKAYPI 317
Query: 379 ----PTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNVTIKLTE 422
P I++ ++ A NV SA + G+ I N+ + + +
Sbjct: 318 DERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQ 366
>gi|427384860|ref|ZP_18881365.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
gi|425728121|gb|EKU90980.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
Length = 462
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 209/410 (50%), Gaps = 53/410 (12%)
Query: 58 VLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGK-WLTGSFNLTSHFTLYI 116
++TDFG VGDGKT + F AI+ S +GG ++ VP G ++ G S+ +++
Sbjct: 48 IITDFGAVGDGKTLCKEPFEKAITICSD---NGGGKITVPAGTYYMNGPLVFKSNVNVHL 104
Query: 117 HKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG 176
K A+L S +ES++ LP + + G + +S LI+ ++ ++ +T G T+NG G
Sbjct: 105 EKGAILDFSTNESDY--LPAVITRWEGTEL--FNYSPLIYAYHVQNIALT-GEGTVNGNG 159
Query: 177 ----EPW--------WIKYRKKQFNV------------TRPYLIEVMFSDNVQISNLTLI 212
PW + + + NV RP IE NV+I +T+I
Sbjct: 160 SKKFSPWNNIQTVEQEMLRKMGRTNVPVYRRVFGEGYKLRPGFIEPFGCANVRIEGVTII 219
Query: 213 DSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKS 272
DSP W +HP++ SNV+++ +T+ + + N DG +P+SC N IE +GDD +A+KS
Sbjct: 220 DSPFWVIHPIFCSNVIVRNVTVDS--HNYNNDGCDPESCRNVLIEGCTFSTGDDAIAIKS 277
Query: 273 GWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRI 332
G D ++G PT++++IR + +GSE++GG++++ E+IT + + +
Sbjct: 278 GRDNDAWRIGQPTENVVIRNC-SFRSKINGVCIGSEIAGGVRNIFIENITIPKSSNAIYF 336
Query: 333 KTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKAL-PTVTGINYRDMVA 391
K+ + RGAY++++YVR + T++ T P+ + A PT+ + +
Sbjct: 337 KSNLDRGAYIQDVYVRNVQADTVR-----TALIRFEPNYKGERSAFHPTL----FNSFLI 387
Query: 392 DNVT--QSAK----LDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQ 435
+NVT QS + + G P I + NVTI P Q N NI+
Sbjct: 388 ENVTCKQSNECGIYMAGFAERPLQNIVLKNVTIGKVPTPYCFQ-NGENIR 436
>gi|448621831|ref|ZP_21668580.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax
denitrificans ATCC 35960]
gi|445754861|gb|EMA06255.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax
denitrificans ATCC 35960]
Length = 512
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 191/384 (49%), Gaps = 37/384 (9%)
Query: 64 GVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLL 123
G D + +T A A+ + A +GG ++ +PPG + + + TL + A L
Sbjct: 5 GTDDDDSLDTAAIQAALDDC---AGEGG-EVYLPPGTYRSAPLRVGDDTTLRLANGAELR 60
Query: 124 ASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW--- 180
QD +E+P + S G ++ G F + + +V +TG I+G G WW
Sbjct: 61 FVQDFTEFPTVE---SRWEGWNQDG--FHPCLHVADAANVTITG-EGVIDGGGSYWWEFV 114
Query: 181 -----------------IKYRKKQFNVT----RPYLIEVMFSDNVQISNLTLIDSPSWNV 219
I+ KQ V+ RP L+++ +NV +S +TL +SP WN
Sbjct: 115 SVPPEEYPPALAERLAEIRSGNKQDAVSTFTVRPPLLQIDGCENVTVSGVTLRNSPFWNT 174
Query: 220 HPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGI 279
H VYS +V + ++I+ P D+PN DGI+ DS R+ D +I +GDD + +KSG DE G
Sbjct: 175 HVVYSEDVTVHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEEGR 234
Query: 280 KVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG 339
+VG PT+++++ + + +GSE +G ++ V + T +T G+RIK+ GRG
Sbjct: 235 EVGRPTENVVVTNCT-VEHGHGGVVIGSETAGDVRHVTVTNCTFTDTDRGIRIKSKRGRG 293
Query: 340 AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDP--KALPTVTGINYRDMVADNVTQS 397
V+++ + M+ + F + G Y + D +P +A P V +++ + A+ V +
Sbjct: 294 GTVEDLRFDTIVMRRVACPFVINGYYQTDIDSDPEPVTEATPNVRNVDFHHITAEEVESA 353
Query: 398 AKLDGIRNDPFTGICISNVTIKLT 421
A L G+ F GI ++V I T
Sbjct: 354 AFLAGLPERRFEGISFTDVDIDAT 377
>gi|15643203|ref|NP_228247.1| exo-poly-alpha-D-galacturonosidase [Thermotoga maritima MSB8]
gi|4980944|gb|AAD35522.1|AE001722_6 exo-poly-alpha-D-galacturonosidase, putative [Thermotoga maritima
MSB8]
Length = 448
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 195/399 (48%), Gaps = 55/399 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L DFG GDG+T +++F AI LSK GG +LIVP G +LTG +L S+ L++
Sbjct: 30 LLDFGARGDGRTDCSESFKRAIEELSK---QGGGRLIVPEGVFLTGPIHLKSNIELHVKG 86
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG-- 176
+ + LP + + G + +S L++ + +V +TG + ++G
Sbjct: 87 TIKFIPDPER----YLPVVLTRFEGIELYN--YSPLVYALDCENVAITG-SGVLDGSADN 139
Query: 177 EPWWIKYRKKQF----------------------------------NVTRPYLIEVMFSD 202
E WW KK F + RP ++
Sbjct: 140 EHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQFYRCR 199
Query: 203 NVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIV 262
NV + + +I+SP W VHPV S NV+I+ + I + PN DGI+P+SC IE
Sbjct: 200 NVLVEGVKIINSPMWCVHPVLSENVIIRNIEISST--GPNNDGIDPESCKYMLIEKCRFD 257
Query: 263 SGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRAEDI 321
+GDD V +KSG D G ++G+P++++++R + IS S + +GSEMSGG+++V A +
Sbjct: 258 TGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVVARNN 317
Query: 322 TAINTQSGVRIKTAVGRGAYVKEI-YVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPT 380
+N + +R+KT RG Y++ I ++ + + + V + Y + + + LP
Sbjct: 318 VYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDNE-----EGEYLPV 372
Query: 381 VTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
V + +++ A + +++G+ ND I IS+ I+
Sbjct: 373 VRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTIIE 411
>gi|420264265|ref|ZP_14766898.1| polygalacturonase [Enterococcus sp. C1]
gi|394768641|gb|EJF48547.1| polygalacturonase [Enterococcus sp. C1]
Length = 438
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 182/365 (49%), Gaps = 25/365 (6%)
Query: 73 TKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWP 132
T+A I L + GG ++ G++ TG+ L S+ L++ A L+ S D ++P
Sbjct: 18 TEAIQEKIDELHQ---QGGGRITFSAGRYPTGALFLKSNIELHLLLGATLVFSDDPKDYP 74
Query: 133 LLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYR--KKQFNV 190
++ R ++S ++ N ++ VTG ++GQG+ WW +R ++Q
Sbjct: 75 VV-----VSRWEGVKREVYASCLYAENAENIAVTG-LGMLDGQGQRWWKTFRENREQLAY 128
Query: 191 TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDS 250
RP LI + + ++ L+DSPSW V+P+ N+ I L I+ P DSPNTDGI+P+S
Sbjct: 129 PRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQNLTIDNLRIKNPADSPNTDGIDPES 188
Query: 251 CTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMS 310
C N RI + +I GDDC+A+KSG ++ +V ++ ++ A+ LGSEMS
Sbjct: 189 CKNVRISNCHIDVGDDCIAIKSGTEDTKERVACENITIVNCHML---HGHGAVVLGSEMS 245
Query: 311 GGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHP- 369
G I++V + +T G+R+K+ GRG +++I V + M + F + Y P
Sbjct: 246 GDIRNVTISNCIFQDTDRGIRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFCGPK 305
Query: 370 ---------DPGFDPKALPTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNVTIK 419
+P + P I++ ++ A NV +A + G+ + I ++ +
Sbjct: 306 GKEKYVWDKNPYPITEETPHFRRIHFANISARNVHAAAGFVYGLAEQFISDITFQDIAVS 365
Query: 420 LTEKP 424
+ E P
Sbjct: 366 MAEHP 370
>gi|418045389|ref|ZP_12683485.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
gi|351678471|gb|EHA61618.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
Length = 446
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 195/399 (48%), Gaps = 55/399 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L DFG GDG+T +++F AI LSK GG +LIVP G +LTG +L S+ L++
Sbjct: 28 LLDFGARGDGRTDCSESFKRAIEELSK---QGGGRLIVPEGVFLTGPIHLKSNIELHVKG 84
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG-- 176
+ + LP + + G + +S L++ + +V +TG + ++G
Sbjct: 85 TIKFIPDPER----YLPVVLTRFEGIELYN--YSPLVYALDCENVAITG-SGVLDGSADN 137
Query: 177 EPWWIKYRKKQF----------------------------------NVTRPYLIEVMFSD 202
E WW KK F + RP ++
Sbjct: 138 EHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQFYRCR 197
Query: 203 NVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIV 262
NV + + +I+SP W VHPV S NV+I+ + I + PN DGI+P+SC IE
Sbjct: 198 NVLVEGVKIINSPMWCVHPVLSENVIIRNIEISST--GPNNDGIDPESCKYMLIEKCRFD 255
Query: 263 SGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRAEDI 321
+GDD V +KSG D G ++G+P++++++R + IS S + +GSEMSGG+++V A +
Sbjct: 256 TGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVVARNN 315
Query: 322 TAINTQSGVRIKTAVGRGAYVKEI-YVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPT 380
+N + +R+KT RG Y++ I ++ + + + V + Y + + + LP
Sbjct: 316 VYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDNE-----EGEYLPV 370
Query: 381 VTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
V + +++ A + +++G+ ND I IS+ I+
Sbjct: 371 VRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTIIE 409
>gi|257889036|ref|ZP_05668689.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,141,733]
gi|257825099|gb|EEV52022.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,141,733]
Length = 445
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 177/347 (51%), Gaps = 24/347 (6%)
Query: 90 GGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGG 149
GG ++VP G++LTG+ L S+ L++ A+L S D ++P++ + R
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIV-----HSRWEGVHRK 84
Query: 150 RFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVT--RPYLIEVMFSDNVQIS 207
++S I+ N+ ++ VTG T++G G+ WW +R + N+ RP L+ + +
Sbjct: 85 VYASCIYAQNVENISVTGF-GTLDGNGKKWWNTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 208 NLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDC 267
++ LI SPSW ++P+ SN LTI P DSPNTDGI+P+SC N RI + +I GDDC
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 268 VAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQ 327
+A+K+G ++ ++ +++ I + + LGSEMSG I+++ + T
Sbjct: 204 IAIKAGTEDTYERIA--CENITITNCTMVH-GHGGVVLGSEMSGSIRNITISNCIFQETD 260
Query: 328 SGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDP-----------K 376
G+R+K+ GRG V++I V + M + F + Y P G +P +
Sbjct: 261 RGIRLKSRRGRGGIVEDIRVSNIVMDNVMCSFILNLYYFCGPR-GKEPYVWEKTAYPIDE 319
Query: 377 ALPTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNVTIKLTE 422
P I++ ++ A NV SA + G+ I N+ + + +
Sbjct: 320 RTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQ 366
>gi|425055000|ref|ZP_18458495.1| polygalacturonase [Enterococcus faecium 505]
gi|403034850|gb|EJY46272.1| polygalacturonase [Enterococcus faecium 505]
Length = 445
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 177/347 (51%), Gaps = 24/347 (6%)
Query: 90 GGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGG 149
GG ++VP G++LTG+ L S+ L++ A+L S D ++P++ + R
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIV-----HSRWEGVHRK 84
Query: 150 RFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVT--RPYLIEVMFSDNVQIS 207
++S I+ N+ ++ VTG T++G G+ WW +R + N+ RP L+ + +
Sbjct: 85 VYASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 208 NLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDC 267
++ LI SPSW ++P+ SN LTI P DSPNTDGI+P+SC N RI + +I GDDC
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 268 VAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQ 327
+A+K+G ++ ++ +++ I + + LGSEMSG I+++ + T
Sbjct: 204 IAIKAGTEDTYERIA--CENITITNCTMVH-GHGGVVLGSEMSGSIRNITISNCIFQETD 260
Query: 328 SGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDP-----------K 376
G+R+K+ GRG V++I V + M + F + Y P G +P +
Sbjct: 261 RGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPR-GKEPYVWEKTAYPIDE 319
Query: 377 ALPTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNVTIKLTE 422
P I++ ++ A NV SA + G+ I N+ + + +
Sbjct: 320 RTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQ 366
>gi|255532707|ref|YP_003093079.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255345691|gb|ACU05017.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 542
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 185/409 (45%), Gaps = 61/409 (14%)
Query: 51 NCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTS 110
N + + VL +G D T+A AI SK GG + P GK+LTG+ +L S
Sbjct: 36 NAQSYYNVL-KYGARNDSSKLATQAIKKAIDAASK---AGGGTVYFPAGKYLTGAIHLKS 91
Query: 111 HFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNA 170
+ T++I A L S + ++ LP + S G D FS L + ++ +T G
Sbjct: 92 NITIFIDAGAELHFSDNFDDY--LPMVKSRYEGVDVTS--FSPLFYAYKAENIAIT-GRG 146
Query: 171 TINGQGEPWWI-------------------------------KYRKKQFNVTRPYLIEVM 199
I+G G+ WW K K+ F RP I+ M
Sbjct: 147 IIDGHGKKWWDFVEGYKADQPRSKWQYMFDDLNREILLPDDPKQMKRGF--LRPPFIQTM 204
Query: 200 FSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPID-SPNTDGINPDSCTNTRIED 258
+ NV I +T+ +SP W V+P + NV I +TI P +PNTDGINP+SC N I +
Sbjct: 205 YCKNVFIEGITIRNSPFWTVNPEFCENVTIHAVTINNPGSFAPNTDGINPESCNNVHISN 264
Query: 259 NYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRA 318
+I GDDC+ +KSG D G K+ P Q+ I +S + +GSEMSG ++ +
Sbjct: 265 CHISVGDDCITIKSGKDAPGRKMAAPAQNYTITNCTMLS-GHGGVVIGSEMSGDVRKISI 323
Query: 319 EDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-YVFWMTGDYG-------SHPD 370
+ T G+RIK+A GRG V+EI V + MK +K + Y S
Sbjct: 324 SNCVFDGTDRGIRIKSARGRGGIVEEIRVDNIIMKNIKQQAIVLDLQYAKTTLEPVSERT 383
Query: 371 PGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
P F +TG V ++A L+G+ P I +++ ++
Sbjct: 384 PRFRNIHFSNITG---------QVNEAAYLNGLEEMPIENISFNDINME 423
>gi|146301992|ref|YP_001196583.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156410|gb|ABQ07264.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 475
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 213/444 (47%), Gaps = 67/444 (15%)
Query: 51 NCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTS 110
N + + + DFG V DGKT NT AF AI ++ +GG +++VP GK+LTG+ +L +
Sbjct: 52 NFQDKTYNINDFGAVADGKTLNTAAFEKAIQTCTE---NGGGKVLVPNGKYLTGAIHLEN 108
Query: 111 HFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNA 170
+ L++ A +L S + ++P++ + +S LI+ N T+V +TG
Sbjct: 109 NVNLHLEDKAEILFSLNPKDYPIV-----HTSWEGTELMNYSPLIYAKNKTNVAITG-KG 162
Query: 171 TINGQGEP--WWIKYRKKQF------------------------------------NVTR 192
+NGQ + WWI K + R
Sbjct: 163 ILNGQADSTNWWIWSGAKMYGWKKGIPSQNDPTNREVLVDMAEKDIPVEQRIFGEGRYLR 222
Query: 193 PYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCT 252
P IE + V + ++T+I+SP W +HP+ ++N++I G+T+ + PN DG +P+
Sbjct: 223 PNFIEFFECNTVLVKDITVINSPFWILHPIKTNNMIIDGVTVNS--HGPNNDGCDPEYSQ 280
Query: 253 NTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGG 312
N I++ +GDDC+A+K+G D G +V +P++++I++ I + +GSE+S G
Sbjct: 281 NIVIKNCTFNTGDDCIAIKAGRDADGRRVAIPSKNIIVQNCKMID-GHGGVVIGSEISAG 339
Query: 313 IKDVRAED--ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY------VFWMTGD 364
+ +V E+ + + N +RIKT RG ++ ++VR + + T+K +F+
Sbjct: 340 VNNVFVENCVMDSPNLDRAIRIKTNSRRGGIIENVFVRNLEVGTVKECVLKLNMFYNV-- 397
Query: 365 YGSHPDPGFDPKALPTVTGINYRDM-VADNVTQSAKLDGIRNDPFTGICISNVTIKLTEK 423
YGS +P + IN ++ V + S +G + P I + NV I+ +
Sbjct: 398 YGSQTG-----NFIPVIRNINLENVNVKNGGKYSIWAEGYKESPVENITLKNVKIQKVDS 452
Query: 424 PKELQWNCTNIQGITSRVTPQACE 447
L+ N NI I + + + E
Sbjct: 453 IYLLK-NVKNINFINTYINEKKVE 475
>gi|227550311|ref|ZP_03980360.1| pectin lyase [Enterococcus faecium TX1330]
gi|257897632|ref|ZP_05677285.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium Com12]
gi|293379031|ref|ZP_06625184.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|424764556|ref|ZP_18191976.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|431758788|ref|ZP_19547411.1| polygalacturonase [Enterococcus faecium E3083]
gi|227180571|gb|EEI61543.1| pectin lyase [Enterococcus faecium TX1330]
gi|257834197|gb|EEV60618.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium Com12]
gi|292642310|gb|EFF60467.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|402419039|gb|EJV51323.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|430616603|gb|ELB53499.1| polygalacturonase [Enterococcus faecium E3083]
Length = 445
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 177/347 (51%), Gaps = 24/347 (6%)
Query: 90 GGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGG 149
GG ++VP G++LTG+ L S+ L++ A+L S D ++P++ + R
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIV-----HSRWEGVHRK 84
Query: 150 RFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVT--RPYLIEVMFSDNVQIS 207
++S I+ N+ ++ VTG T++G G+ WW +R + N+ RP L+ + +
Sbjct: 85 VYASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 208 NLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDC 267
++ LI SPSW ++P+ SN LTI P DSPNTDGI+P+SC N RI + +I GDDC
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 268 VAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQ 327
+A+K+G ++ ++ +++ I + + LGSEMSG I+++ + T
Sbjct: 204 IAIKAGTEDTYERIA--CENITITNCTMVH-GHGGVVLGSEMSGSIRNITISNCIFQETD 260
Query: 328 SGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDP-----------K 376
G+R+K+ GRG V++I V + M + F + Y P G +P +
Sbjct: 261 RGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPR-GKEPYVWEKTAYPIDE 319
Query: 377 ALPTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNVTIKLTE 422
P I++ ++ A NV SA + G+ I N+ + + +
Sbjct: 320 RTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQ 366
>gi|237710945|ref|ZP_04541426.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229454789|gb|EEO60510.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 446
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 188/400 (47%), Gaps = 66/400 (16%)
Query: 68 GKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQD 127
G+ NT N+ I L+ A+GG L P G +LTGS ++ S+ TL + A L S++
Sbjct: 38 GRKLNTALINSTIDRLN---ANGGGTLFFPAGTYLTGSIHMKSNITLELEAGATLKFSEN 94
Query: 128 ESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKY---- 183
++ LP + G F LI+ + ++ + G T++GQG+ WW ++
Sbjct: 95 FDDF--LPYVEVRHEGIMMKS--FQPLIYAVDAENITIK-GEGTLDGQGKAWWTEFFRVL 149
Query: 184 ------RKKQFN------------------------------VTRPYLIEVMFSDNVQIS 207
K+ N RP I + NV++
Sbjct: 150 VDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRPPFIHPIRCKNVRVE 209
Query: 208 NLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDC 267
+T+I+SP W V+P + NV I+G+TI + SPNTDGINP+SC N I D +I GDDC
Sbjct: 210 GVTIINSPFWTVNPEFCDNVTIKGITIHN-VPSPNTDGINPESCKNVHISDCHISVGDDC 268
Query: 268 VAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQ 327
+ +KSG D K+G+P +++ I +S + +GSEMSGG+K V + T
Sbjct: 269 ITIKSGRDLQARKLGVPCENITITNCTMLS-GHGGVVIGSEMSGGVKKVTISNCVFDGTD 327
Query: 328 SGVRIKTAVGRGAYVKEIYVRRMTMKTM-KYVFWMTGDYGSHPDPGFDPKALPT------ 380
G+R+K+ GRG V++I V + M + K + Y P +PK+ T
Sbjct: 328 RGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMPA---EPKSDRTPEFRNI 384
Query: 381 -VTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
V+G+ RD V + G+ P TGI + +V I+
Sbjct: 385 YVSGVTVRD-----VNTPIMVVGLPEAPITGIVMRDVYIQ 419
>gi|431753622|ref|ZP_19542291.1| polygalacturonase [Enterococcus faecium E2620]
gi|430611655|gb|ELB48732.1| polygalacturonase [Enterococcus faecium E2620]
Length = 445
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 177/347 (51%), Gaps = 24/347 (6%)
Query: 90 GGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGG 149
GG ++VP G++LTG+ L S+ L++ A+L S D ++P++ + R
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIV-----HSRWEGVHRK 84
Query: 150 RFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVT--RPYLIEVMFSDNVQIS 207
++S I+ N+ ++ VTG T++G G+ WW +R + N+ RP L+ + +
Sbjct: 85 VYASCIYAQNVENISVTGF-GTLDGNGKKWWNTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 208 NLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDC 267
++ LI SPSW ++P+ SN LTI P DSPNTDGI+P+SC N RI + +I GDDC
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 268 VAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQ 327
+A+K+G ++ ++ +++ I + + LGSEMSG I+++ + T
Sbjct: 204 IAIKAGTEDTYERIA--CENITITNCTMVH-GHGGVVLGSEMSGSIRNITISNCIFQETD 260
Query: 328 SGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDP-----------K 376
G+R+K+ GRG V++I V + M + F + Y P G +P +
Sbjct: 261 RGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPR-GKEPYVWEKTAYPIDE 319
Query: 377 ALPTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNVTIKLTE 422
P I++ ++ A NV SA + G+ I N+ + + +
Sbjct: 320 RTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQ 366
>gi|430842911|ref|ZP_19460818.1| polygalacturonase [Enterococcus faecium E1007]
gi|431064168|ref|ZP_19493515.1| polygalacturonase [Enterococcus faecium E1604]
gi|431131393|ref|ZP_19498944.1| polygalacturonase [Enterococcus faecium E1613]
gi|431602171|ref|ZP_19522547.1| polygalacturonase [Enterococcus faecium E1861]
gi|431742395|ref|ZP_19531288.1| polygalacturonase [Enterococcus faecium E2039]
gi|430492622|gb|ELA68986.1| polygalacturonase [Enterococcus faecium E1007]
gi|430565953|gb|ELB05076.1| polygalacturonase [Enterococcus faecium E1613]
gi|430568809|gb|ELB07839.1| polygalacturonase [Enterococcus faecium E1604]
gi|430589939|gb|ELB28031.1| polygalacturonase [Enterococcus faecium E1861]
gi|430600153|gb|ELB37811.1| polygalacturonase [Enterococcus faecium E2039]
Length = 445
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 177/347 (51%), Gaps = 24/347 (6%)
Query: 90 GGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGG 149
GG ++VP G++LTG+ L S+ L++ A+L S D ++P++ + R
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIV-----HSRWEGVHRK 84
Query: 150 RFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVT--RPYLIEVMFSDNVQIS 207
++S I+ N+ ++ VTG T++G G+ WW +R + N+ RP L+ + +
Sbjct: 85 VYASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 208 NLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDC 267
++ LI SPSW ++P+ SN LTI P DSPNTDGI+P+SC N RI + +I GDDC
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 268 VAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQ 327
+A+K+G ++ ++ +++ I + + LGSEMSG I+++ + T
Sbjct: 204 IAIKAGTEDTYERIA--CENITITNCTMVH-GHGGVVLGSEMSGSIRNITISNCIFQETD 260
Query: 328 SGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDP-----------K 376
G+R+K+ GRG V++I V + M + F + Y P G +P +
Sbjct: 261 RGIRLKSRRGRGGNVEDIRVSNIVMDNVMCPFILNLYYFCGPR-GKEPYVWEKTAYPIDE 319
Query: 377 ALPTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNVTIKLTE 422
P I++ ++ A NV SA + G+ I N+ + + +
Sbjct: 320 RTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQ 366
>gi|293571108|ref|ZP_06682148.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E980]
gi|431739345|ref|ZP_19528280.1| polygalacturonase [Enterococcus faecium E1972]
gi|291608838|gb|EFF38120.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E980]
gi|430596073|gb|ELB33930.1| polygalacturonase [Enterococcus faecium E1972]
Length = 445
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 177/347 (51%), Gaps = 24/347 (6%)
Query: 90 GGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGG 149
GG ++VP G++LTG+ L S+ L++ A+L S D ++P++ + R
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIV-----HSRWEGVHRK 84
Query: 150 RFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVT--RPYLIEVMFSDNVQIS 207
++S I+ N+ ++ VTG T++G G+ WW +R + N+ RP L+ + +
Sbjct: 85 VYASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 208 NLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDC 267
++ LI SPSW ++P+ SN LTI P DSPNTDGI+P+SC N RI + +I GDDC
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 268 VAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQ 327
+A+K+G ++ ++ +++ I + + LGSEMSG I+++ + T
Sbjct: 204 IAIKAGTEDTYERIA--CENITITNCTMVH-GHGGVVLGSEMSGSIRNITISNCIFQETD 260
Query: 328 SGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDP-----------K 376
G+R+K+ GRG V++I V + M + F + Y P G +P +
Sbjct: 261 RGIRLKSRRGRGGNVEDIRVSNIVMDNVMCPFILNLYYFCGPR-GKEPYVWEKTAYPIDE 319
Query: 377 ALPTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNVTIKLTE 422
P I++ ++ A NV SA + G+ I N+ + + +
Sbjct: 320 RTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSMAQ 366
>gi|336251837|ref|YP_004585805.1| Polygalacturonase [Halopiger xanaduensis SH-6]
gi|335339761|gb|AEH38999.1| Polygalacturonase [Halopiger xanaduensis SH-6]
Length = 516
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 184/393 (46%), Gaps = 43/393 (10%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ ++G + D T A TA+ A+ G + VP G++ TG + TL++
Sbjct: 11 IREYGAISDSDDPATDAIQTALDE----CAETGGTVYVPAGRFRTGPLRIGDRTTLHLDP 66
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A L D + P + S G ++ G F ++ T+ +V ++G TI+G G+
Sbjct: 67 GATLTFVGD---YDAFPTVESRWEGWNQYG--FHPCLWVTDAENVEISG-RGTIDGNGQY 120
Query: 179 WW-------------IKYRKKQFN------------VTRPYLIEVMFSDNVQISNLTLID 213
WW ++ R +FN RP L ++ S+NV +S +TL +
Sbjct: 121 WWQFYGADDDELPEGLRERLAEFNGKNDKADDVSSFTLRPPLFQISESENVTVSGVTLQN 180
Query: 214 SPSWNVHPVYSSNVLIQGLTIRAPID-SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKS 272
SP WN H VYS NV I + + P + +PN DGI+ DS RI D YI +GDD + +KS
Sbjct: 181 SPFWNTHVVYSENVTISDVNVLNPAEGAPNGDGIDIDSSRYVRISDAYINAGDDAICIKS 240
Query: 273 GWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRI 332
G + G +VG P + + + + +GSEMSG ++DV + T +T GVRI
Sbjct: 241 GKNAEGREVGEPASQITVTNC-TVEAGHGGVVIGSEMSGDVRDVAVTNCTFTDTDRGVRI 299
Query: 333 KTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDY----GSHPDPGFDPKALPTVTGINYRD 388
KT RG V+++ + M+ + F + G Y S P+P + P V + + +
Sbjct: 300 KTQRDRGGVVEDLRFDNIVMRRIASPFTINGYYFTPLDSEPEPV--DEGTPMVRNVTFSN 357
Query: 389 MVADNVTQSAKLDGIRNDPFTGICISNVTIKLT 421
+ A NV + G+ F GI NV I T
Sbjct: 358 ITARNVETAGFFAGLPEQYFEGIEFDNVRIDAT 390
>gi|268612424|pdb|3JUR|A Chain A, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612425|pdb|3JUR|B Chain B, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612426|pdb|3JUR|C Chain C, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612427|pdb|3JUR|D Chain D, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
Length = 448
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 195/399 (48%), Gaps = 55/399 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L DFG GDG+T +++F AI LSK GG +LIVP G +LTG +L S+ L++
Sbjct: 30 LLDFGARGDGRTDCSESFKRAIEELSK---QGGGRLIVPEGVFLTGPIHLKSNIELHVKG 86
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG-- 176
+ + LP + + G + +S L++ + +V +TG + ++G
Sbjct: 87 TIKFIPDPER----YLPVVLTRFEGIELYN--YSPLVYALDCENVAITG-SGVLDGSADN 139
Query: 177 EPWWIKYRKKQF----------------------------------NVTRPYLIEVMFSD 202
E WW KK F + RP ++
Sbjct: 140 EHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQFYRCR 199
Query: 203 NVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIV 262
NV + + +I+SP W +HPV S NV+I+ + I + PN DGI+P+SC IE
Sbjct: 200 NVLVEGVKIINSPMWCIHPVLSENVIIRNIEISST--GPNNDGIDPESCKYMLIEKCRFD 257
Query: 263 SGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRAEDI 321
+GDD V +KSG D G ++G+P++++++R + IS S + +GSEMSGG+++V A +
Sbjct: 258 TGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVVARNN 317
Query: 322 TAINTQSGVRIKTAVGRGAYVKEI-YVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPT 380
+N + +R+KT RG Y++ I ++ + + + V + Y + + + LP
Sbjct: 318 VYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDNE-----EGEYLPV 372
Query: 381 VTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
V + +++ A + +++G+ ND I IS+ I+
Sbjct: 373 VRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTIIE 411
>gi|325106419|ref|YP_004276073.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975267|gb|ADY54251.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 554
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 170/345 (49%), Gaps = 61/345 (17%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+TDFGG+GDG NT+AF+ AI LS A GG L VP G WLTG S+ L++
Sbjct: 49 ITDFGGIGDGIYLNTQAFSKAIDALS---AKGGGMLTVPAGIWLTGPIQFKSNINLHLED 105
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A++L S D++ +P++ + G D R S I+G NLT++ +TG A I+G G+
Sbjct: 106 RAIILFSPDKNLYPIVE---TSFEGLDTR--RCQSPIWGKNLTNIAITGSGA-IDGNGQF 159
Query: 179 W------------WIK-------YRKKQF------------------------------- 188
W W K +++ +
Sbjct: 160 WRPLKKQKVTESFWKKTVSGGGVFKRSDYWMPSAQYLHGDTISDMNVPRHFKTDEEWQSV 219
Query: 189 -NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGIN 247
+ RP ++ NV + + +SP+WN+HP+ NV+I G+ +R P + N DG++
Sbjct: 220 RDFLRPVMVSFRECKNVYLQGVIFQNSPAWNIHPLMCENVIIDGIQVRNPSYAQNGDGLD 279
Query: 248 PDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGS 307
+SC N + ++ GDD + +KSG +E G K GMP +++I+ + +GS
Sbjct: 280 LESCKNVIVVNSSFDVGDDGICLKSGKNEDGRKRGMPCENVIVDNC-TVFKGHGGFVVGS 338
Query: 308 EMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
EMSGG++++ + + T G+R K+ GRG V+ I++ ++M
Sbjct: 339 EMSGGVRNISVTNCQFLGTDVGLRFKSNRGRGGVVENIFISNISM 383
>gi|261406667|ref|YP_003242908.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283130|gb|ACX65101.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 523
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/445 (28%), Positives = 197/445 (44%), Gaps = 75/445 (16%)
Query: 54 KHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFT 113
+H+ +TD+G VGDG NT+AF+ AI +K GG L++PPG WLTG L S
Sbjct: 18 EHTVTITDYGAVGDGVYDNTQAFHQAIEACAKA---GGGTLVIPPGIWLTGPIKLQSRIE 74
Query: 114 LYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATIN 173
L+ A ++ S+ ++P+L + +Y GR R S + G L DV +TGG +
Sbjct: 75 LHASAGAFVMFSKFFEDYPIL--MSTY-EGRQMF--RCQSPLDGEGLEDVAITGG-GIFD 128
Query: 174 GQGEP-----------------------------WWIKYRKKQFNVT------------- 191
G GE WW + T
Sbjct: 129 GSGEAWRPVKRGKLTESQWERLIQSGGVVDDQGLWWPTPAARDGQETLDRIEQTGSEEPQ 188
Query: 192 ---------RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPN 242
RP L+ + + +S T +S +W +HP S + IQ +T+R P + N
Sbjct: 189 DYEPVRDYLRPNLLSLRNCKRILLSGPTFQNSAAWCLHPWASEQITIQNITVRNPWYAQN 248
Query: 243 TDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAA 302
DG++ DSC +E++ GDD + +KSG +E G +G P++ + IR +
Sbjct: 249 GDGLDIDSCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERISIRNCT-VYHGHGG 307
Query: 303 IALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMK-----TMKY 357
I +GSEMSGGIKDV D T I T G+R K+ GRG V+ I + R+ M+ + +
Sbjct: 308 IVVGSEMSGGIKDVYVSDCTFIGTDIGIRFKSCRGRGGVVENILIERIRMRDIDGDAISF 367
Query: 358 VFWMTGDYGS--HPDPGFDP--KALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICI 413
+ G GS + + P + P I +D+V + ++G+ P +
Sbjct: 368 NLYYEGKAGSGEYQEEVMLPVTEETPVFRNIVIQDIVCSGAHTALLINGLPEMP-----V 422
Query: 414 SNVTIKLTEKPKELQWNCTNIQGIT 438
N+T+K + C N Q ++
Sbjct: 423 ENLTVKRSAITSREGIVCRNGQNLS 447
>gi|395803621|ref|ZP_10482865.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434175|gb|EJG00125.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 553
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 183/395 (46%), Gaps = 75/395 (18%)
Query: 19 ILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRK-----HSAVLTDFGGVGDGKTSNT 73
+L LT LS + IEF+ ++ ++ L DFG V G NT
Sbjct: 8 LLCIALTSFSLSFNTVSAQKYDTYKNIEFKMTEVQEPVIPNYNVNLKDFGAVNGGYVLNT 67
Query: 74 KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPL 133
KAF AI LSK GG +LI+PPG WLTG L S+ L+ + AL+ S D+S +P+
Sbjct: 68 KAFADAIDALSK---KGGGKLIIPPGIWLTGPIILKSNIELHAERGALIKFSTDKSLYPI 124
Query: 134 LPP----LPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPW---------- 179
+ L ++ R S I+G NL ++ TG N +G GE W
Sbjct: 125 IETSFEGLNTW---------RCISPIYGKNLENIAFTG-NGVWDGSGEAWRQVKKSKLTD 174
Query: 180 --WIKY------------------------------------RKKQF----NVTRPYLIE 197
W K+ K+ F + RP L+
Sbjct: 175 EQWKKFVASGGVLNEKKDSWYPSEQYLKGAKGADQNIRHDLKTKEDFEAIHDFLRPVLVS 234
Query: 198 VMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIE 257
+ S V +SP+WN+HP+ +++++ +T+R P S N DG++ +SC N IE
Sbjct: 235 IQNSKRVMFDGPVFQNSPAWNLHPLLIEDLIVRNVTVRNPWFSQNGDGLDVESCKNVIIE 294
Query: 258 DNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVR 317
++ GDD + +KSG D+ G G+P +++I++ I + + +GSEMSGG+K++
Sbjct: 295 NSSFDVGDDAICIKSGKDKDGRDRGVPCENIIVKNNI-VYHGHGGVTVGSEMSGGVKNLH 353
Query: 318 AEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ T + T G+R K+ GRG V+ IY+ + M
Sbjct: 354 VSNCTFMGTDVGLRFKSTRGRGGVVENIYISDVFM 388
>gi|403252174|ref|ZP_10918484.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
gi|402812187|gb|EJX26666.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
Length = 446
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 194/399 (48%), Gaps = 55/399 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L DFG GD +T +++F AI LSK GG +LIVP G +LTG +L S+ L++
Sbjct: 28 LLDFGARGDRRTDCSESFKRAIEELSK---QGGGRLIVPEGVFLTGPIHLKSNIELHVKG 84
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG-- 176
+ + LP + + G + +S L++ + +V +TG + ++G
Sbjct: 85 TIKFIPDPER----YLPVVLTRFEGIELYN--YSPLVYALDCENVAITG-SGVLDGSADN 137
Query: 177 EPWWIKYRKKQF----------------------------------NVTRPYLIEVMFSD 202
E WW KK F + RP ++
Sbjct: 138 EHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQFYRCR 197
Query: 203 NVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIV 262
NV + + +I+SP W VHPV S NV+I+ + I + PN DGI+P+SC IE
Sbjct: 198 NVLVEGVKIINSPMWCVHPVLSENVIIRNIEISST--GPNNDGIDPESCKYMLIEKCRFD 255
Query: 263 SGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRAEDI 321
+GDD V +KSG D G ++G+P++++++R + IS S + +GSEMSGG+++V A +
Sbjct: 256 TGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVVARNN 315
Query: 322 TAINTQSGVRIKTAVGRGAYVKEI-YVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPT 380
+N + +R+KT RG Y++ I ++ + M + V + Y + + + LP
Sbjct: 316 VYMNVERALRLKTNSRRGGYMENIFFIDNVAMNVSEEVIRINLRYDNE-----EGEYLPV 370
Query: 381 VTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
V + +++ A + +++G+ ND I IS+ I+
Sbjct: 371 VRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTIIE 409
>gi|257867957|ref|ZP_05647610.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC30]
gi|257874287|ref|ZP_05653940.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC10]
gi|257802040|gb|EEV30943.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC30]
gi|257808451|gb|EEV37273.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC10]
Length = 438
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 182/365 (49%), Gaps = 25/365 (6%)
Query: 73 TKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWP 132
T+A I L + GG ++ G++ TG+ L S+ L++ A L+ S D ++P
Sbjct: 18 TEAIQEKIDELHQ---QGGGRITFSAGRYPTGALFLKSNIELHLLLGATLVFSDDPKDYP 74
Query: 133 LLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYR--KKQFNV 190
++ R ++S ++ N ++ VTG ++GQG+ WW +R ++Q
Sbjct: 75 VV-----VSRWEGVKREVYASCLYAENAENIAVTGL-GMLDGQGQRWWKTFRENREQLAY 128
Query: 191 TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDS 250
RP LI + + ++ L+DSPSW V+P+ ++ I L I+ P DSPNTDGI+P+S
Sbjct: 129 PRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQDLTIDNLRIKNPADSPNTDGIDPES 188
Query: 251 CTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMS 310
C N RI + +I GDDC+A+KSG ++ +V ++ ++ A+ LGSEMS
Sbjct: 189 CKNVRISNCHIDVGDDCIAIKSGTEDTKERVACENITIVNCHML---HGHGAVVLGSEMS 245
Query: 311 GGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHP- 369
G I++V + +T G+R+K+ GRG +++I V + M + F + Y P
Sbjct: 246 GDIRNVTISNCIFQDTDRGIRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFCGPK 305
Query: 370 ---------DPGFDPKALPTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNVTIK 419
+P + P I++ ++ A NV +A + G+ + I ++ +
Sbjct: 306 GKEKYVWDKNPYPITEETPHFRRIHFANISARNVHAAAGFVYGLAEQFISDITFQDIAVS 365
Query: 420 LTEKP 424
+ E P
Sbjct: 366 MAEHP 370
>gi|255692376|ref|ZP_05416051.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260621842|gb|EEX44713.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 513
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 188/405 (46%), Gaps = 55/405 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ + G G S T+ N I K +++GG + P G +LT + ++ S+ TLY+
Sbjct: 24 MKELGADPRGIESCTELINQTIE---KASSEGGGTIYFPAGVYLTATIHMKSNITLYVES 80
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A+L S ++ LP + R S LI+ + ++ +TG T++G G
Sbjct: 81 GAVLRFSDRFEDY--LPFVKI--RWEGTVMNTLSPLIYAHDAENLTITG-RGTLDGNGFK 135
Query: 179 WW---------IK---------------------------YRKKQFN--VTRPYLIEVMF 200
WW IK Y K + RP I+
Sbjct: 136 WWSWEKETRELIKKNGGKLPALNKLQRMWEEANEELEISDYYKPSLERRMFRPPFIQFYE 195
Query: 201 SDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPID---SPNTDGINPDSCTNTRIE 257
+NV I N+ +++SP W ++P + NV + G+TI P PNTDGINP SC N RI
Sbjct: 196 CNNVLIENVRIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGINPSSCRNVRIS 255
Query: 258 DNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVR 317
D +I GDDC+ +KSG D G K G +++ I + +S + +GSEMSGG++ V
Sbjct: 256 DCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLS-GHGGVVIGSEMSGGVRRVT 314
Query: 318 AEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK---YVFWMTGDYGSHPDPGFD 374
+ SG+R+K++ GRG V+E+ V + MK ++ ++F + D S +P
Sbjct: 315 ISNCVFDGIDSGIRLKSSRGRGGVVEELRVDNIVMKNIQRNAFIFDLFYDKESKMEPV-- 372
Query: 375 PKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
+ P I+ ++ ++ Q + GI P G+ SN+ +K
Sbjct: 373 SERTPVFRNIHLSNITGSDIKQIGYIKGIEEMPVQGLSFSNINMK 417
>gi|257876852|ref|ZP_05656505.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC20]
gi|257811018|gb|EEV39838.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC20]
Length = 438
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 182/365 (49%), Gaps = 25/365 (6%)
Query: 73 TKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWP 132
T+A I L + GG ++ G++ TG+ L S+ L++ A L+ S D ++P
Sbjct: 18 TEAIQEKIDELHQ---QGGGRITFSAGRYPTGALFLKSNIELHLLLGATLVFSDDPKDYP 74
Query: 133 LLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYR--KKQFNV 190
++ R ++S ++ N ++ VTG ++GQG+ WW +R ++Q
Sbjct: 75 VV-----VSRWEGVKREVYASCLYAENAENIAVTGL-GMLDGQGQRWWKTFRENREQLAY 128
Query: 191 TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDS 250
RP LI + + ++ L+DSPSW V+P+ ++ I L I+ P DSPNTDGI+P+S
Sbjct: 129 PRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQDLTIDNLRIKNPADSPNTDGIDPES 188
Query: 251 CTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMS 310
C N RI + +I GDDC+A+KSG ++ +V ++ ++ A+ LGSEMS
Sbjct: 189 CKNVRISNCHIDVGDDCIAIKSGTEDTKERVACENITIVNCHML---HGHGAVVLGSEMS 245
Query: 311 GGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHP- 369
G I++V + +T G+R+K+ GRG +++I V + M + F + Y P
Sbjct: 246 GDIRNVTISNCIFQDTDRGIRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFCGPK 305
Query: 370 ---------DPGFDPKALPTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNVTIK 419
+P + P I++ ++ A NV +A + G+ + I ++ +
Sbjct: 306 GKEKYVWDKNPYPITEETPHFRRIHFANISARNVHAAAGFVYGLAEQFISDITFQDIAVS 365
Query: 420 LTEKP 424
+ E P
Sbjct: 366 MAEHP 370
>gi|224537921|ref|ZP_03678460.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520465|gb|EEF89570.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
Length = 964
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 200/447 (44%), Gaps = 77/447 (17%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
LT++GGVGDG T NT+ F AI +LS A GG L+VP G WLTG L SH L++ K
Sbjct: 38 LTEYGGVGDGITLNTECFREAIEHLS---AKGGGTLVVPTGIWLTGPIRLKSHIELHLEK 94
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+ALL+ + D +P + R + S I N +D+ +TG I+G G+
Sbjct: 95 NALLIFTSDFWSYPSRSTFFTEVFYR-----QLQSPISAYNESDIAITG-EGVIDGSGQD 148
Query: 179 W-----------------------------WI-------KYRKKQFNV------------ 190
W W +Y +++ N+
Sbjct: 149 WRPVRKNKVTVDEWEHLQRKSGVLNDAGTIWYPMADDVQRYARREENIIHKYNTPDEWVR 208
Query: 191 ----TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGI 246
RP L+ + + V + +T +SP WN+HP ++++ G+ +R P +S N DG+
Sbjct: 209 LKDYVRPELMHLYHCERVLLQGVTFQNSPFWNLHPELCKHLIVDGVCVRNPWNSQNGDGL 268
Query: 247 NPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALG 306
+ +SC N + + GDD V +KSG +E G GMP +++++ + +G
Sbjct: 269 DIESCQNVLVVQSTFDVGDDAVCIKSGRNEAGRLRGMPAKNVVVEDCT-VFHGHGGFVVG 327
Query: 307 SEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK---YVFWMTG 363
SEMSGG+ + + +NT +G+R K+ RG +V +IY++ + M + +F M
Sbjct: 328 SEMSGGVHSILVRNCKFLNTDTGLRFKSNRQRGGHVSDIYIQNVYMCGIAAEPILFDMYY 387
Query: 364 DYGSHPDPGFDP-----KALPTVT-------GINYRDMVADNVTQSAKLDGIRNDPFTGI 411
S + D + +P VT I+ D+ ++ DG+ + I
Sbjct: 388 QGKSAVEAMEDALKGSMETIPPVTEKTPKFDHIHISDVHCYQAGRALLFDGLPEQNISDI 447
Query: 412 CISNVTIKLTEKPKELQWNCTNIQGIT 438
+ NVTI E + ++G+T
Sbjct: 448 TLRNVTIHAVEGGVFSECTAVRMEGVT 474
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 188/413 (45%), Gaps = 64/413 (15%)
Query: 47 FQALNCRKHSAVLTDFGGVGDGKTSN-TKAFNTAISNLSKYAADGGAQLIVPPGKWLTGS 105
Q + R V++ +G K N T++ AI DGG ++++P G++ T +
Sbjct: 542 IQTTSFRNQDYVISHYGA---QKNQNITESLKAAIQACH---TDGGGRVVIPKGEYYTAA 595
Query: 106 FNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVV 165
+L S+ L++ K A+L ++ LP + S G D S LI+ T+V +
Sbjct: 596 IHLLSNVNLHLEKGAVLRFLTSPEDY--LPVVVSRWEGVD--CRTLSPLIYANGQTNVAI 651
Query: 166 TGGNATINGQG--EPWW-----------------------------IKYRKKQFNVT--- 191
TG T++GQ + WW I ++ F+V
Sbjct: 652 TGA-GTLDGQASRDNWWSWKGRKSSSEQNTEAKVGKDKLLWMEQNRISLDERIFSVNDKL 710
Query: 192 RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSC 251
RP I+ + V + +T+I SP W +HP+ S NV+++G+ + PN DG +P+SC
Sbjct: 711 RPPFIQFYRCNRVLVEGVTIIRSPFWMLHPLLSKNVIVRGVKFDS--HGPNNDGCDPESC 768
Query: 252 TNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMS 310
N IE +GDDCVA+KSG + G +P++++I+R CI D A +A+GSE+S
Sbjct: 769 ENVLIESCDFNNGDDCVAIKSGKNNDGRTWNLPSRNIIVRN--CIMRDGHAGVAVGSEIS 826
Query: 311 GGIKDVRAED--ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGS 367
G DV D + + + +RIK+ RG V Y R + + K V + Y
Sbjct: 827 GSCYDVWVRDCVMDSPSMDRPLRIKSNALRGGVVDGFYARDIRIGECKQAVLRLELQYER 886
Query: 368 HPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTG-ICISNVTIK 419
++P +R++ +NVT GI + F I I NV +K
Sbjct: 887 VQSGPYNPV---------FRNIYLENVTCKKSSYGILIEGFEDRISIFNVRLK 930
>gi|325679916|ref|ZP_08159485.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
gi|324108354|gb|EGC02601.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
Length = 513
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 182/398 (45%), Gaps = 33/398 (8%)
Query: 53 RKHSAV-LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSH 111
++ SAV + DFG VGDG +T + TA++ L G +L P G +LTG NL SH
Sbjct: 72 KETSAVSVKDFGAVGDGVADDTLSIQTAVNCLP-----AGGRLRFPEGTYLTGPINLKSH 126
Query: 112 FTLYIHKDALLLASQDESEWPLLPPLPS---------YGRGRDEPGGRFSSLIFGTNLTD 162
T+ + A LL + D + +P +P + + +G +L+F D
Sbjct: 127 ITIEFTEKATLLGTTDMARYPKIPGVITDLVTGEEVHFGTWEGNAVPMHQALLFAEYAED 186
Query: 163 VVVTG-GNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHP 221
+ + G G N Q WW+ + ++ V RP LI V + +T ++ SW +HP
Sbjct: 187 IKIVGRGTVDGNAQNSQWWVDVKNQE--VPRPRLIFFNRCKLVTVHGITAQNAASWQLHP 244
Query: 222 VYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKV 281
+S+ + L++ AP DSPNTD ++P++C I GDDC+A+KSG E G K
Sbjct: 245 YFSTELQFLDLSVNAPKDSPNTDALDPEACDTVNIVGCRFSVGDDCIAIKSGKIEIGRKF 304
Query: 282 GMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG-- 339
P IR I + AI LGSEM+GG+K++ T G+RIKT GRG
Sbjct: 305 KQPANRHTIRNCI-MQFGHGAITLGSEMAGGVKNLSVSRCIFKETDRGLRIKTRRGRGKD 363
Query: 340 AYVKEIYVRRMTMK-----TMKYVFWMTGDYGSHPDPGFDPKALPT------VTGINYRD 388
A + I + + M + +++ D + + + LP + +RD
Sbjct: 364 AVIDGIEFKNIKMDGVLTPIVMNMWYNCCDPDRYSEYNTTREKLPVDDRTPYLGKFTFRD 423
Query: 389 MVADNVTQSA-KLDGIRNDPFTGICISNVTIKLTEKPK 425
M N +A DG+ P I + N+ E K
Sbjct: 424 MECLNCHVAACYCDGLPEMPIDEITVDNIKFTYAENAK 461
>gi|372281193|ref|ZP_09517229.1| polygalacturonase-like protein [Oceanicola sp. S124]
Length = 861
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 190/426 (44%), Gaps = 27/426 (6%)
Query: 39 TKNSYTIEFQALNCRKH-SAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVP 97
T ++I QAL+ R A L D V D S N + A G L VP
Sbjct: 61 TDYEFSIGRQALSFRTAPCAGLVD---VTDHGASPDLPDNAPAFAAALAALPEGGTLRVP 117
Query: 98 PGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGR--GRDE--PGGRFSS 153
PG++ L + TL++ + A L A D + WP+LPP GR G E P F++
Sbjct: 118 PGRFAISPVFLKARMTLWLEEGAELCALHDRAGWPILPPRDDAGRVIGTWEGLPEAAFAA 177
Query: 154 LIFGTNLTDVVVTG-GNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLI 212
+ + + +TG G G WW ++ + RP + + VQ+S +T+
Sbjct: 178 PLTAIDCDGLTITGLGILDAGGDRGDWWSWPKETRAGARRPRALFLAHGQGVQLSGITVR 237
Query: 213 DSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKS 272
+SPSW VHP + GL I+ P DSPNTDG+NP+SCT+ + + GDDC+AVKS
Sbjct: 238 NSPSWTVHPYRIDGLTCAGLKIQNPPDSPNTDGLNPESCTDVTLAGIHFSVGDDCIAVKS 297
Query: 273 GWDEYGIKVGM-----PTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQ 327
G G G+ PT+ L + + + + LGSEMSG I DV I T
Sbjct: 298 GKRGTGALKGLAGHLAPTRRLHVHHCL-MERGHGGMVLGSEMSGDITDVTVTACEFIGTD 356
Query: 328 SGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPD----------PGFDPKA 377
G+RIKT GRG V ++ + M+ + + Y PD P +
Sbjct: 357 RGLRIKTRRGRGGEVARVHFSDVLMQGVGTPLAINAFYYCDPDGRSPEVQSRSPAPVDET 416
Query: 378 LPTVTGINYRDMVADNVTQSA-KLDGIRNDPFTGICISNVTIKLT-EKPKELQWNCTNIQ 435
P + I + D++A +V A + G+ P TG+ + N L P ++ ++
Sbjct: 417 TPKIHDITFSDVIATDVPVCAVAVLGLPEAPVTGVRLKNFRASLDPSAPPQVPLMADGVE 476
Query: 436 GITSRV 441
+ R
Sbjct: 477 PVAGRA 482
>gi|373954236|ref|ZP_09614196.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373890836|gb|EHQ26733.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 545
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 120/448 (26%), Positives = 207/448 (46%), Gaps = 73/448 (16%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
+K + + +G V DG T NTK+ N AI SK +GG +++P G W+TG L S+
Sbjct: 40 KKDTFNIIKYGAVADGITLNTKSINNAIDACSK---NGGGVVLIPQGLWMTGPIVLKSNV 96
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGN--- 169
L+I + A++ + D+S++PL+ G R S + GTNL ++ +TGG
Sbjct: 97 NLHIDRAAMVQMTDDKSQYPLVE-----GNYEGHAAVRNQSPVSGTNLVNIAITGGGIID 151
Query: 170 ---------------------------ATINGQGEPWWIKYRKKQFNVT----------- 191
++ G+ W+ + N
Sbjct: 152 GNGTGVWRAIGKDRLTESEWKELVASGGVVSENGKSWYPSQSYAKGNAIKDVSLLKPGKS 211
Query: 192 -----------RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDS 240
RP ++ + + +S T +SP+W +H + ++ +Q + +R P ++
Sbjct: 212 LSDYEEYKDYFRPNMVVLTGCKKILLSGTTFQNSPNWCLHTLLCEDLTLQDVHVRNPWNA 271
Query: 241 PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS 300
N D I+ +SC N +E++ +GDD + +KSG DE G K G+PT+++++R I +
Sbjct: 272 QNGDAIDVESCRNVLVENSTFDAGDDGLCIKSGRDEEGRKRGVPTENVVMRNNI-VYRAH 330
Query: 301 AAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY--- 357
+GSEMSGG +++ D T I T G+R KTA GRG V+ IY++ ++M+ + +
Sbjct: 331 GGFVIGSEMSGGARNIFVSDCTFIGTDIGLRFKTARGRGGIVENIYIKNISMRDILHEAI 390
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGI--NYRDMVADNVTQSAKLDGI--RNDP---FTG 410
+F M Y S K P VT +R+ NV + GI R P
Sbjct: 391 LFDMY--YMSKAGSTLGLKTFPPVTEATPQFRNFYVSNVACNGAETGIFVRGLPEMSIKN 448
Query: 411 ICISNVTIKLTEKPKELQWNCTNIQGIT 438
I + N+ +K + + ++ N +++ IT
Sbjct: 449 IYLENMVLKADKGAELIEANNISLKNIT 476
>gi|423215151|ref|ZP_17201679.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692414|gb|EIY85652.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
Length = 513
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 188/405 (46%), Gaps = 55/405 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ + G G S T+ N I K +++GG + P G +LT + + ++ TLY+
Sbjct: 24 MKELGADPRGIESCTELINQTIE---KASSEGGGTIYFPAGVYLTATIYMKNNITLYVES 80
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A+L S ++ LP + R S LI+ + ++ +TG T++G G
Sbjct: 81 GAVLRFSDRFEDY--LPFVKI--RWEGTVMNTLSPLIYAHDAENLTITG-RGTLDGNGFK 135
Query: 179 WW---------IK---------------------------YRKKQFN--VTRPYLIEVMF 200
WW IK Y K + RP I+
Sbjct: 136 WWSWEKETRELIKKNGGKLPALNKLQRMWEEANEELEISDYYKPSLERRMFRPPFIQFYE 195
Query: 201 SDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPID---SPNTDGINPDSCTNTRIE 257
+NV I N+ +++SP W ++P + NV + G+TI P PNTDGINP SC N RI
Sbjct: 196 CNNVLIENVKIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGINPSSCRNVRIS 255
Query: 258 DNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVR 317
D +I GDDC+ +KSG D G K G +++ I + +S + +GSEMSGG++ V
Sbjct: 256 DCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLS-GHGGVVIGSEMSGGVRRVT 314
Query: 318 AEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK---YVFWMTGDYGSHPDPGFD 374
+ T SG+R+K++ GRG V+E+ V + MK ++ ++F + D S +P
Sbjct: 315 ISNCVFDGTDSGIRLKSSRGRGGVVEELRVDNIVMKNIQRNAFIFDLFYDKESKVEPV-- 372
Query: 375 PKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
+ P I+ ++ ++ Q + GI P G+ SN+ +K
Sbjct: 373 SERTPVFRNIHLSNITGSDIKQIGYIKGIEEMPVQGLSFSNINMK 417
>gi|424911961|ref|ZP_18335338.1| endopolygalacturonase [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|392847992|gb|EJB00515.1| endopolygalacturonase [Rhizobium leguminosarum bv. viciae USDA
2370]
Length = 517
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 172/376 (45%), Gaps = 36/376 (9%)
Query: 67 DGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQ 126
+G +N +A TA++ + G L + G W + L S+ T ++ + A+L A
Sbjct: 101 EGARANAEALETAVAAVPH-----GGTLRLAAGLWTSFPVRLKSNMTFHLAEGAVLRAPS 155
Query: 127 DESEWPLLPPLPSYGR--GRDE--PGGRFSSLIFGTNLTDVVVTGGNATINGQGE--PWW 180
WP+LP G G E P F++ + TD ++ G ++G G+ WW
Sbjct: 156 SRKAWPILPARDDAGHMLGSWEGLPDACFAAPVQAIG-TDNLIIEGRGVLDGSGDRGDWW 214
Query: 181 IKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDS 240
++ + RP + ++ +Q+ T+ ++ SW +HP +++ GLTI AP DS
Sbjct: 215 SWPKETRDGARRPRGLHLVSCRKIQLLGFTIKNAASWTIHPQGCEDLIAAGLTINAPHDS 274
Query: 241 PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGW-------DEYGIKVGMPTQHLIIRRL 293
PNTDG NP+SC N I GDDC+AVK+G D G+ +H ++ R
Sbjct: 275 PNTDGFNPESCRNVTISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRGIRVRHCLMER- 333
Query: 294 ICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMK 353
+ +GSEMSGG+ DV ED + T G+R+KT GRG V I +RR+ +
Sbjct: 334 -----GHGGLVIGSEMSGGVHDVSVEDCDMVGTDRGLRLKTRRGRGGIVSNIAMRRVLLD 388
Query: 354 TMKYVFWMTGDYGSHPD----------PGFDPKALPTVTGINYRDMVADNVTQSAKLD-G 402
++ Y D P K P + GI D+ N+ +A + G
Sbjct: 389 GVQTALSANAHYHCDADGHDERVQSRQPAPIDKGTPFIDGIIVEDVEIRNLAHAAGVFLG 448
Query: 403 IRNDPFTGICISNVTI 418
+ P + I N+TI
Sbjct: 449 LPEAPIRNVAIRNLTI 464
>gi|300725841|ref|ZP_07059307.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299776888|gb|EFI73432.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 447
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 188/396 (47%), Gaps = 42/396 (10%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG NT A N AI +S++ GG ++I+P G W+TG+ + S+ LY+
Sbjct: 28 IIDFGAQCGPDHVNTMAINQAIKAVSQH---GGGKVIIPAGYWMTGAIEMQSNVNLYLDY 84
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+A + + + S++ L+ P R + I GT+L ++ +TG + +G GE
Sbjct: 85 NAFVSFTTNISDYRLVDT-----DFEGSPSKRCIAPISGTHLQNIAITG-HGVFDGSGER 138
Query: 179 W------------WIKYRKKQFNVT---------------RPYLIEVMFSDNVQISNLTL 211
W W + + +V RP L+ NV++ +T
Sbjct: 139 WRPVKRSKLTSAQWKNFTSRPGSVNKKGDVWEPDSNAANIRPVLLNFTSCKNVKLEGVTF 198
Query: 212 IDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVK 271
+SP+W VHP+ NV I + + P + N D ++ +SC N I ++ +GDD + +K
Sbjct: 199 KNSPAWCVHPLLCENVTIDNIKVNNPWYAQNGDALDVESCKNVVIINSLFDAGDDAICIK 258
Query: 272 SGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVR 331
SG +E G + G+P +++ I+ + +GSEMSGG+K++ D T I T G+R
Sbjct: 259 SGKNEAGRRRGVPCENVYIKNNTVLH-GHGGFVIGSEMSGGVKNIYISDCTFIGTDVGLR 317
Query: 332 IKTAVGRGAYVKEIYVRRMTMKTM-KYVFWMTGDYGSHPDPGFDP---KALPTVTGINYR 387
K+A GRG V+ IY+ R+ MK + M Y S+ P + P I +
Sbjct: 318 FKSARGRGGVVENIYIDRINMKNIVNEAITMNLYYSSNGKPAERTDVNEGTPVFRNIEMK 377
Query: 388 DMVADNVTQSAKLDGIRNDPFTGICISNVTI-KLTE 422
+++ + +S L G+ P I I N+ + K+ E
Sbjct: 378 NLLVEGAGKSFYLYGLPEMPLENISIQNMRVSKIAE 413
>gi|212694786|ref|ZP_03302914.1| hypothetical protein BACDOR_04320 [Bacteroides dorei DSM 17855]
gi|265750531|ref|ZP_06086594.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|212662640|gb|EEB23214.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|263237427|gb|EEZ22877.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
Length = 446
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 187/400 (46%), Gaps = 66/400 (16%)
Query: 68 GKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQD 127
G+ NT N+ I L+ A+GG L P G +LTGS ++ S+ TL + A L S++
Sbjct: 38 GRKLNTALINSTIDRLN---ANGGGTLFFPAGTYLTGSIHMKSNITLELEAGATLKFSEN 94
Query: 128 ESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKY---- 183
++ LP + G F LI+ + ++ + G T++GQG+ WW ++
Sbjct: 95 FDDF--LPYVEVRHEGIMMKS--FQPLIYAVDAENITIK-GEGTLDGQGKAWWTEFFRVL 149
Query: 184 ------RKKQFN------------------------------VTRPYLIEVMFSDNVQIS 207
K+ N RP I + NV++
Sbjct: 150 VDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRPPFIHPIRCKNVRVE 209
Query: 208 NLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDC 267
+ +I+SP W V+P + NV I+G+TI + SPNTDGINP+SC N I D +I GDDC
Sbjct: 210 GVKIINSPFWTVNPEFCDNVTIKGITIHN-VPSPNTDGINPESCKNVHISDCHISVGDDC 268
Query: 268 VAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQ 327
+ +KSG D K+G+P +++ I +S + +GSEMSGG+K V + T
Sbjct: 269 ITIKSGRDLQARKLGVPCENITITNCTMLS-GHGGVVIGSEMSGGVKKVTISNCVFDGTD 327
Query: 328 SGVRIKTAVGRGAYVKEIYVRRMTMKTM-KYVFWMTGDYGSHPDPGFDPKALPT------ 380
G+R+K+ GRG V++I V + M + K + Y P +PK+ T
Sbjct: 328 RGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMPA---EPKSDRTPEFRNI 384
Query: 381 -VTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
V+G+ RD V + G+ P TGI + +V I+
Sbjct: 385 YVSGVTVRD-----VNTPIMVVGLPEAPITGIVMRDVYIQ 419
>gi|154502614|ref|ZP_02039674.1| hypothetical protein RUMGNA_00427 [Ruminococcus gnavus ATCC 29149]
gi|153796806|gb|EDN79226.1| polygalacturonase (pectinase) [Ruminococcus gnavus ATCC 29149]
Length = 532
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 153/292 (52%), Gaps = 19/292 (6%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG GDG +T AI + + +++++P G + S L H T+ + K
Sbjct: 93 VRDFGAKGDGVQDDTTYIQAAIMSCPR-----NSRVLIPEGTYRVTSLFLKDHLTMELAK 147
Query: 119 DALLLASQDESEWPLLPPLPS---------YGRGRDEPGGRFSSLIFGTNLTDVVVTGGN 169
A+L A + + +L G E F+ ++ G + DV + G
Sbjct: 148 GAVLSAYTERERFSILRGTYQSEDQENEYILGTWEGEAQNMFAGIMNGIGIKDVTICG-E 206
Query: 170 ATINGQG--EPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNV 227
TI+G E WW+ ++ + RP +I + ++V I+ +T+ +SPSWN+HP + S++
Sbjct: 207 GTIDGNASWENWWLDAKEVR-GAARPRMIFLNRCEDVTITGITVQNSPSWNIHPYFCSHL 265
Query: 228 LIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQH 287
G+T+ P SPNTDG+NP+SC + I GDDC+AVK+G G K +P+ +
Sbjct: 266 KFIGVTVLGPKVSPNTDGLNPESCDDVEITGCLFSVGDDCIAVKAGKISVGAKYKVPSSN 325
Query: 288 LIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG 339
+ IR+ C+ +I LGSEM+ GIK+++A +NT G+RIKT GRG
Sbjct: 326 IRIRQC-CMRDGHGSITLGSEMAAGIKNLQARQCVFLNTDRGLRIKTRRGRG 376
>gi|423311776|ref|ZP_17289713.1| hypothetical protein HMPREF1058_00325 [Bacteroides vulgatus
CL09T03C04]
gi|392689891|gb|EIY83166.1| hypothetical protein HMPREF1058_00325 [Bacteroides vulgatus
CL09T03C04]
Length = 446
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 187/400 (46%), Gaps = 66/400 (16%)
Query: 68 GKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQD 127
G+ NT N+ I L+ A GG L P G +LTGS ++ S+ TL + A L S++
Sbjct: 38 GRKLNTALINSTIDRLN---AHGGGTLFFPAGTYLTGSIHMKSNITLELEAGATLKFSEN 94
Query: 128 ESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKY---- 183
++ LP + G F LI+ + ++ + G T++GQG+ WW ++
Sbjct: 95 FDDF--LPYVEVRHEGIMMKS--FQPLIYAVDAENITIK-GEGTLDGQGKAWWTEFFRVL 149
Query: 184 ------RKKQFN------------------------------VTRPYLIEVMFSDNVQIS 207
K+ N RP I + NV++
Sbjct: 150 VDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRPPFIHPIRCKNVRVE 209
Query: 208 NLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDC 267
+ +I+SP W V+P + NV I+G+TI + SPNTDGINP+SC N I D +I GDDC
Sbjct: 210 GVKIINSPFWTVNPEFCDNVTIKGITIHN-VPSPNTDGINPESCKNVHISDCHISVGDDC 268
Query: 268 VAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQ 327
+ +KSG D K+G+P +++ I +S + +GSEMSGG+K V + T
Sbjct: 269 ITIKSGRDLQARKLGVPCENITITNCTMLS-GHGGVVIGSEMSGGVKKVTISNCIFDGTD 327
Query: 328 SGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDPGFDPKALPT------ 380
G+R+K+ GRG V++I V + M+ +K + Y P +PK+ T
Sbjct: 328 RGIRLKSTRGRGGIVEDIRVSNIVMRNIKKEAIVLNLKYSKMPA---EPKSDRTPEFRNI 384
Query: 381 -VTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
V+G+ RD V + G+ P TGI + +V I+
Sbjct: 385 YVSGVTVRD-----VNTPIMVVGLPEAPITGIVMRDVYIQ 419
>gi|281421112|ref|ZP_06252111.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
gi|281404647|gb|EFB35327.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
Length = 524
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 168/345 (48%), Gaps = 61/345 (17%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L DFG +GDG + T AF AI L++ GG +LIVP G W TG L S+ L++ K
Sbjct: 51 LKDFGAIGDGSSLCTTAFAKAIDALTQ---KGGGKLIVPQGVWFTGPIVLKSNINLHLEK 107
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A++L S D++ +P + + G D R S I G +LT+V +T G I+G GE
Sbjct: 108 GAVILFSPDDALYPF---IETSFEGLDTR--RCQSPISGHHLTNVAIT-GQGCIDGNGEY 161
Query: 179 W----------------------------WIKYR-------------------KKQFNVT 191
W W ++++N
Sbjct: 162 WRPLKKQKVTAAQWKQITSRGGAFKRADYWFPSEGALKADNSANMNVPKTPASEEEWNEI 221
Query: 192 RPYLIEVMFS----DNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGIN 247
+ +L VM S NV ++ + +SP+WN+HP+ NVLI+ + +R P + N DG++
Sbjct: 222 KRFLRPVMISLVNCKNVWLNGVIFQNSPAWNIHPLMCENVLIEDVLVRNPSYAQNGDGLD 281
Query: 248 PDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGS 307
+SC N I ++ GDD + +KSG D G K G+P +++I+ + +GS
Sbjct: 282 LESCKNALIVNSTFDVGDDGICIKSGKDADGRKRGIPCENVIVNGCT-VFKGHGGFVVGS 340
Query: 308 EMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
EMSGG+K+++ D + T G+R K+ GRG V+ IY+ M+M
Sbjct: 341 EMSGGVKNIKVSDCQFLGTDVGLRFKSTRGRGGIVENIYIDNMSM 385
>gi|345516133|ref|ZP_08795626.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|423227918|ref|ZP_17214324.1| hypothetical protein HMPREF1063_00144 [Bacteroides dorei
CL02T00C15]
gi|423239050|ref|ZP_17220166.1| hypothetical protein HMPREF1065_00789 [Bacteroides dorei
CL03T12C01]
gi|423243178|ref|ZP_17224254.1| hypothetical protein HMPREF1064_00460 [Bacteroides dorei
CL02T12C06]
gi|229434099|gb|EEO44176.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|392637665|gb|EIY31531.1| hypothetical protein HMPREF1063_00144 [Bacteroides dorei
CL02T00C15]
gi|392646053|gb|EIY39772.1| hypothetical protein HMPREF1064_00460 [Bacteroides dorei
CL02T12C06]
gi|392647461|gb|EIY41162.1| hypothetical protein HMPREF1065_00789 [Bacteroides dorei
CL03T12C01]
Length = 446
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 187/400 (46%), Gaps = 66/400 (16%)
Query: 68 GKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQD 127
G+ NT N+ I L+ A+GG L P G +LTGS ++ S+ TL + A L S++
Sbjct: 38 GRKLNTTLINSTIDRLN---ANGGGTLFFPAGTYLTGSIHMKSNITLELEAGATLKFSEN 94
Query: 128 ESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKY---- 183
++ LP + G F LI+ + ++ + G T++GQG+ WW ++
Sbjct: 95 FDDF--LPYVEVRHEGIMMKS--FQPLIYAVDAENITIK-GEGTLDGQGKAWWTEFFRVL 149
Query: 184 ------RKKQFN------------------------------VTRPYLIEVMFSDNVQIS 207
K+ N RP I + NV++
Sbjct: 150 VDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRPPFIHPIRCKNVRVE 209
Query: 208 NLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDC 267
+ +I+SP W V+P + NV I+G+TI + SPNTDGINP+SC N I D +I GDDC
Sbjct: 210 GVKIINSPFWTVNPEFCDNVTIKGITIHN-VPSPNTDGINPESCKNVHISDCHISVGDDC 268
Query: 268 VAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQ 327
+ +KSG D K+G+P +++ I +S + +GSEMSGG+K V + T
Sbjct: 269 ITIKSGRDLQARKLGVPCENITITNCTMLS-GHGGVVIGSEMSGGVKKVTISNCVFDGTD 327
Query: 328 SGVRIKTAVGRGAYVKEIYVRRMTMKTM-KYVFWMTGDYGSHPDPGFDPKALPT------ 380
G+R+K+ GRG V++I V + M + K + Y P +PK+ T
Sbjct: 328 RGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMPA---EPKSDRTPEFRNI 384
Query: 381 -VTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
V+G+ RD V + G+ P TGI + +V I+
Sbjct: 385 YVSGVTVRD-----VNTPIMVVGLPEAPITGIVMRDVYIQ 419
>gi|189464497|ref|ZP_03013282.1| hypothetical protein BACINT_00839 [Bacteroides intestinalis DSM
17393]
gi|189438287|gb|EDV07272.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 492
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 184/404 (45%), Gaps = 55/404 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ G G S T+ N I K A++GG + P G +LT + ++ S+ TLY+
Sbjct: 24 MKQLGADAKGIKSCTELINRTIE---KAASEGGGTIYFPVGTYLTATIHMKSNITLYLES 80
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A+L S ++ L R S LI+ + +V ++G T++G G
Sbjct: 81 GAVLRFSDKFEDYLPFVTL----RWEGTVMKSLSPLIYAHSADNVTISG-RGTLDGNGLK 135
Query: 179 WWI------------------------------------KYRKKQFN--VTRPYLIEVMF 200
WW+ Y K + RP I+
Sbjct: 136 WWLWEFDTRKVIKENGGKLPTLDKLQQMWVDANKDLEISDYYKPSLERRMFRPPFIQFYE 195
Query: 201 SDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSP---NTDGINPDSCTNTRIE 257
N+ I N+ +I+SP W ++P + NV I G+TI P +P NTDGINP SC N RI
Sbjct: 196 CTNILIENVKIINSPFWTINPAFCDNVTIHGVTINNPSSNPKGPNTDGINPSSCRNVRIS 255
Query: 258 DNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVR 317
D +I GDDC+ +KSG D G K G +++ I I +S + +GSEMSGG+K V
Sbjct: 256 DCFISVGDDCITIKSGRDADGRKYGKACENITITNCIMLS-GHGGVVIGSEMSGGVKRVA 314
Query: 318 AEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK---YVFWMTGDYGSHPDPGFD 374
+ T +G+R+K + GRG V++I V + MK ++ ++F + D S +P
Sbjct: 315 ISNCVFDGTNAGIRLKASRGRGGVVEDIRVDNIVMKNIQGDAFIFDLFYDRLSKVEPV-- 372
Query: 375 PKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
+ P I+ ++ +++ + + GI P + + SN+ I
Sbjct: 373 SERTPIFRNIHLSNVTGNDIKRIGYIKGIEEMPVSELSFSNMNI 416
>gi|238917515|ref|YP_002931032.1| glycoside hydrolase family 28 [Eubacterium eligens ATCC 27750]
gi|238872875|gb|ACR72585.1| Glycoside Hydrolase Family 28 [Eubacterium eligens ATCC 27750]
Length = 518
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 174/349 (49%), Gaps = 28/349 (8%)
Query: 35 ECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQL 94
E P + E+ LN R +FG GDG+ +T A AI AA +++
Sbjct: 67 EYGPVEFKTDYEYVTLNVR-------EFGAYGDGEHDDTNAIQCAI-----MAAPKDSRV 114
Query: 95 IVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLP-PLPSY--------GRGRD 145
+VP G + S L + L + K A+L A + ++P+LP + +Y G
Sbjct: 115 LVPEGVYKISSIFLKDNLNLELAKGAVLSAFTEREKFPILPGQIETYDEKDYYNLGTWEG 174
Query: 146 EPGGRFSSLIFGTNLTDVVVTGGNATING--QGEPWWIKYRKKQFNVTRPYLIEVMFSDN 203
P FS+++ G N ++V +TG TI+G + WW K K + RP L + N
Sbjct: 175 NPLDMFSAIVCGINCSNVTITG-EGTIDGCTTHDNWW-KNCKIRNTAWRPRLFFINNCSN 232
Query: 204 VQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVS 263
V + +T+ +SPSW +HP +S ++ + I P +S NTDG++P+SC + + YI
Sbjct: 233 VTMHGITVQNSPSWTIHPYFSKHLKFIDVKILNPANSHNTDGLDPESCQDVLVLGTYISV 292
Query: 264 GDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITA 323
GDDC+A+KSG K PT+ + +R+ C+ A+ +GSE++ G+KDV D
Sbjct: 293 GDDCIAIKSGKIYMAQKEKTPTEDMTVRQC-CMRDGHGAVTVGSEIAAGVKDVHIRDCMF 351
Query: 324 INTQSGVRIKTAVGRG--AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPD 370
+NT G+R+KT GRG + + +I + M + F + Y PD
Sbjct: 352 MNTDRGLRVKTRRGRGKLSVLDDISFENIDMDNVMTPFVVNSFYFCDPD 400
>gi|150005260|ref|YP_001300004.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|149933684|gb|ABR40382.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
Length = 446
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 186/400 (46%), Gaps = 66/400 (16%)
Query: 68 GKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQD 127
G+ NT N+ I L+ A GG L P G +LTGS ++ S+ TL + A L S++
Sbjct: 38 GRKLNTALINSTIDRLN---AHGGGTLFFPAGTYLTGSIHMKSNITLELEAGATLKFSEN 94
Query: 128 ESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKY---- 183
++ LP + G F LI+ + ++ + G T++GQG+ WW ++
Sbjct: 95 FDDF--LPYVEVRHEGIMMKS--FQPLIYAVDAENITIK-GEGTLDGQGKAWWTEFFRVL 149
Query: 184 ------RKKQFN------------------------------VTRPYLIEVMFSDNVQIS 207
K+ N RP I + NV++
Sbjct: 150 VDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRPPFIHPIRCKNVRVE 209
Query: 208 NLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDC 267
+ +I+SP W V+P + NV I+G+TI + SPNTDGINP+SC N I D +I GDDC
Sbjct: 210 GVKIINSPFWTVNPEFCDNVTIKGITIHN-VPSPNTDGINPESCKNVHISDCHISVGDDC 268
Query: 268 VAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQ 327
+ +KSG D K+G+P +++ I +S + +GSEMSGG+K V + T
Sbjct: 269 ITIKSGRDLQARKLGVPCENITITNCTMLS-GHGGVVIGSEMSGGVKKVTISNCVFDGTD 327
Query: 328 SGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDPGFDPKALPT------ 380
G+R+K+ GRG V++I V + M +K + Y P +PK+ T
Sbjct: 328 RGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMP---AEPKSDRTPEFRNI 384
Query: 381 -VTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
V+G+ RD V + G+ P TGI + +V I+
Sbjct: 385 YVSGVTVRD-----VNTPIMVVGLPEAPITGIVMRDVYIQ 419
>gi|294777094|ref|ZP_06742551.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|319643453|ref|ZP_07998076.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345517811|ref|ZP_08797274.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|254836521|gb|EET16830.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|294448963|gb|EFG17506.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|317384858|gb|EFV65814.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 446
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 186/400 (46%), Gaps = 66/400 (16%)
Query: 68 GKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQD 127
G+ NT N+ I L+ A GG L P G +LTGS ++ S+ TL + A L S++
Sbjct: 38 GRKLNTALINSTIDRLN---AHGGGTLFFPAGTYLTGSIHMKSNITLELEAGATLKFSEN 94
Query: 128 ESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKY---- 183
++ LP + G F LI+ + ++ + G T++GQG+ WW ++
Sbjct: 95 FDDF--LPYVEVRHEGIMMKS--FQPLIYAVDAENITIK-GEGTLDGQGKAWWTEFFRVL 149
Query: 184 ------RKKQFN------------------------------VTRPYLIEVMFSDNVQIS 207
K+ N RP I + NV++
Sbjct: 150 VDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRPPFIHPIRCKNVRVE 209
Query: 208 NLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDC 267
+ +I+SP W V+P + NV I+G+TI + SPNTDGINP+SC N I D +I GDDC
Sbjct: 210 GVKIINSPFWTVNPEFCDNVTIKGITIHN-VPSPNTDGINPESCKNVHISDCHISVGDDC 268
Query: 268 VAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQ 327
+ +KSG D K+G+P +++ I +S + +GSEMSGG+K V + T
Sbjct: 269 ITIKSGRDLQARKLGVPCENITITNCTMLS-GHGGVVIGSEMSGGVKKVTISNCVFDGTD 327
Query: 328 SGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDPGFDPKALPT------ 380
G+R+K+ GRG V++I V + M +K + Y P +PK+ T
Sbjct: 328 RGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMP---AEPKSDRTPEFRNI 384
Query: 381 -VTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
V+G+ RD V + G+ P TGI + +V I+
Sbjct: 385 YVSGVTVRD-----VNTPIMVVGLPEAPITGIVMRDVYIQ 419
>gi|15891800|ref|NP_357472.1| polygalacturonase-like protein [Agrobacterium fabrum str. C58]
gi|15160276|gb|AAK90257.1| polygalacturonase-like protein [Agrobacterium fabrum str. C58]
Length = 517
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 170/376 (45%), Gaps = 36/376 (9%)
Query: 67 DGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQ 126
+G +N A A++ A G L + PG W L S TL++ + A+L A
Sbjct: 101 EGARANATALENAVA-----AVPAGGTLRLGPGVWTAFPVRLKSDMTLHLAEGAVLRAPS 155
Query: 127 DESEWPLLPPLPSYGR--GRDE--PGGRFSSLIFGTNLTDVVVTGGNATINGQGEP--WW 180
+ WP+LP GR G E P F++ + ++V+ G ++G G+ WW
Sbjct: 156 VRNRWPILPARDEAGRMLGSWEGLPDACFAAPVHAIGADNLVIEG-RGILDGSGDKGDWW 214
Query: 181 IKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDS 240
++ + RP + ++ Q+ T+ ++ SW +HP ++ GLTI AP DS
Sbjct: 215 SWPKETREGARRPRGLHLVSCHKTQLLGFTIRNAASWTIHPQGCEDLTAAGLTIIAPHDS 274
Query: 241 PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGW-------DEYGIKVGMPTQHLIIRRL 293
PNTDG NP+SC N I GDDC+AVK+G D G+ +H +++R
Sbjct: 275 PNTDGFNPESCRNVMISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRGISVRHCLMQR- 333
Query: 294 ICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMK 353
+ +GSEMSGG+ DV ED I T G+R+KT GRG V I +RR+ +
Sbjct: 334 -----GHGGLVIGSEMSGGVHDVTVEDCDMIGTDRGLRLKTRRGRGGMVGNITMRRVLLD 388
Query: 354 TMKYVFWMTGDYGSHPD----------PGFDPKALPTVTGINYRDMVADNVTQSAKLD-G 402
++ Y D P P V GI D+ N+ +A + G
Sbjct: 389 GVQTALSANAHYHCDADGHDDWVQSRNPAPVNDGTPFVDGITVEDVEIRNLAHAAGVFLG 448
Query: 403 IRNDPFTGICISNVTI 418
+ P I + N+TI
Sbjct: 449 LPEAPIRNIVVRNLTI 464
>gi|148269623|ref|YP_001244083.1| glycoside hydrolase family protein [Thermotoga petrophila RKU-1]
gi|147735167|gb|ABQ46507.1| glycoside hydrolase, family 28 [Thermotoga petrophila RKU-1]
Length = 446
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 195/399 (48%), Gaps = 55/399 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L DFG GD +T +++F AI LSK GG +LIVP G +LTG +L S+ L++
Sbjct: 28 LLDFGARGDERTDCSESFKRAIEELSK---QGGGRLIVPEGVFLTGPIHLKSNIELHVKG 84
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG-- 176
+ + LP + + G + +S L++ + +V +TG + ++G
Sbjct: 85 TIKFIPDPER----YLPVVLTRFEGIELYN--YSPLVYALDCKNVAITG-SGVLDGSADN 137
Query: 177 EPWWIKYRKKQF----------------------------------NVTRPYLIEVMFSD 202
E WW KK F + RP ++
Sbjct: 138 EHWWSWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQFYRCR 197
Query: 203 NVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIV 262
NV + ++ +I+SP W VHPV S NV+I+ + I + PN DGI+P+SC IE
Sbjct: 198 NVLVEDVKIINSPMWCVHPVLSENVIIRNIEISST--GPNNDGIDPESCKYMLIEKCRFD 255
Query: 263 SGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRAEDI 321
+GDD V +KSG D G ++G+P++++++R + IS S + +GSEMSGG+++V A +
Sbjct: 256 TGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVVARNN 315
Query: 322 TAINTQSGVRIKTAVGRGAYVKEI-YVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPT 380
+N + +R+KT RG Y++ I ++ + + + V + Y + + + LP
Sbjct: 316 VYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDNE-----EGEYLPV 370
Query: 381 VTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
V + +++ A + +++G+ ND I IS+ ++
Sbjct: 371 VRSVFVKNLKATGGKYALRIEGLENDYVKDILISDTIME 409
>gi|393786391|ref|ZP_10374527.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
gi|392660020|gb|EIY53637.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
Length = 509
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 192/427 (44%), Gaps = 77/427 (18%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L DFG VG+G T AF AI LS A GG LIVP G WLTG L S+ L+I K
Sbjct: 51 LPDFGAVGNGVELCTDAFAKAIETLS---ARGGGYLIVPAGIWLTGPIVLKSNINLHIEK 107
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A++L S D +PL+ + G D R S I G NLT+V +TG A I+G G
Sbjct: 108 GAVILFSPDVELYPLVE---TVFEGLDTR--RCQSPISGRNLTNVAITGQGA-IDGNGHY 161
Query: 179 W----------------------------WIKY-------------------RKKQFNVT 191
W W Y ++++
Sbjct: 162 WRPLKREKVTESVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLKTEEEWQSV 221
Query: 192 RPYLIEVMFS----DNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGIN 247
R +L VM S NV + +SP+WN+HP+ NVLI+ + +R P + N DG++
Sbjct: 222 RHFLRPVMVSLIECKNVWFQGVIFQNSPAWNLHPLMCENVLIEDIQVRNPSYAQNGDGLD 281
Query: 248 PDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGS 307
+SC N I ++ GDD + +KSG DE G + P +++++ + +GS
Sbjct: 282 LESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGC-TVFKGHGGFVVGS 340
Query: 308 EMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM-----KTMKYVFWMT 362
EMSGG+++V + + T G+R K+ GRG V+ I++R ++M + + + +
Sbjct: 341 EMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNVSMMDIPTEPVTFNLYYG 400
Query: 363 G-------DYGSHPDPGFDPKAL----PTVTGINYRDMVADNVTQSAKLDGIRNDPFTGI 411
G + G DP + P I+ ++V N ++ +GI P GI
Sbjct: 401 GKSAVEVLESGEKIPAKVDPLPVDDTTPCFRNIHISNLVCSNARRALFFNGIPEMPIDGI 460
Query: 412 CISNVTI 418
+ N+ I
Sbjct: 461 TLDNLDI 467
>gi|254785604|ref|YP_003073033.1| glycoside hydrolase family 28 domain-containing protein
[Teredinibacter turnerae T7901]
gi|237685733|gb|ACR12997.1| glycoside hydrolase family 28 domain protein [Teredinibacter
turnerae T7901]
Length = 467
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 199/397 (50%), Gaps = 52/397 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ +G V DG++ +T A N+AI K GG +++VP G +LTG+ +L S+ L++ +
Sbjct: 55 IQHYGAVADGQSLSTGAINSAIIACHKA---GGGRVLVPAGHYLTGAVHLLSNVELHLAE 111
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE- 177
+A L S+D +++ LP + + G + G +S LI+ ++ +TG E
Sbjct: 112 NARLSFSRDPNDY--LPAVFTRWEGVEYMG--YSPLIYAYQAENIGITGTGVLDGSASEM 167
Query: 178 PWW------------------------------IKYRKKQF---NVTRPYLIEVMFSDNV 204
WW + R++ + + RP I+ NV
Sbjct: 168 HWWPWKGTSEWARPGFASQDNSRAQLFAQAEAGVPPRQRHYSDGHYLRPPFIQPYQCRNV 227
Query: 205 QISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSG 264
+ ++T+I++P W VHPV NV + L +++ PN+DG NP+SC N IE + +G
Sbjct: 228 LLEDVTIINAPFWLVHPVLCDNVTARRLHLQSL--GPNSDGCNPESCRNVLIEHCFFDTG 285
Query: 265 DDCVAVKSGWDEYGIKVGMPTQHLIIRRLIC-ISPDSAAIALGSEMSGGIKDVRAED--I 321
DDC+A+KSG + G ++ +P+++++IR C + + +GSE+SGG+++V A D +
Sbjct: 286 DDCIAIKSGRNADGRRLNIPSENIVIRH--CEMRAGHGGVVIGSEISGGVRNVYAHDNRM 343
Query: 322 TAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTV 381
++ + + G RIKT RG ++ IY+R + + +K + Y FD PTV
Sbjct: 344 SSPDLERGFRIKTNSVRGGLIENIYLRDIQIGQVKDAIVINFHYEEGDAGKFD----PTV 399
Query: 382 TGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
IN ++ ++ Q ++ G P + I+N T
Sbjct: 400 RNINLDNISCEHAQQVFQIRGFDRAPIKQLSITNSTF 436
>gi|86143268|ref|ZP_01061670.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
gi|85830173|gb|EAQ48633.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
Length = 547
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 167/346 (48%), Gaps = 57/346 (16%)
Query: 58 VLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
++TDFG GDG+ NT+AF+ A +K + GG ++VP G W TG L S+ L++
Sbjct: 49 LITDFGAKGDGQFKNTEAFHKA---FAKAFSQGGGTVVVPEGIWYTGPITLKSNINLHLK 105
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
+ AL+L S ++PL+ SY R +S I ++ +TG I+G G
Sbjct: 106 QGALILFSDQFDDYPLVET--SY---EGLKSARSTSPINALGAKNIAITG-KGIIDGNGG 159
Query: 178 PW-----------------------------W------IKYRK--------KQFNVTRPY 194
W W +K K +Q R +
Sbjct: 160 AWRPVKKSKMTQHQWNALVASGGVLSDNKSVWYPDEAALKGSKSDLSDWTIEQLQTVRSF 219
Query: 195 LIEVMFS----DNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDS 250
L VM S +N+ + T +SP+WN+HP+ S N++++ LT+R P + N DG++ +S
Sbjct: 220 LRPVMVSLVDCENILLDGPTFQNSPAWNIHPLMSKNIIVRNLTVRNPWYAQNGDGLDLES 279
Query: 251 CTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMS 310
C N + +N GDD + +KSG +E G K MPTQ++II+ + +GSEMS
Sbjct: 280 CENVLVYNNTFDVGDDAICIKSGKNEDGRKRNMPTQNVIIKN-NTVYHGHGGFVVGSEMS 338
Query: 311 GGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK 356
GG+ + I T +G+R K+ GRG V++IY+ + M +K
Sbjct: 339 GGVSKIHISHCNFIGTDTGLRFKSTRGRGGVVEQIYISHIYMNEIK 384
>gi|399032129|ref|ZP_10731768.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398069540|gb|EJL60890.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 479
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 210/439 (47%), Gaps = 73/439 (16%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ D+G V DG T NT AF AI + A +GG ++IVP GK+LTG+ +L S+ L++
Sbjct: 60 IKDYGAVADGTTLNTGAFEKAIK---ECAENGGGKVIVPNGKYLTGAIHLESNVNLHLDD 116
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+A +L S + ++P++ + +S L++ N T+V +TG T+NGQ
Sbjct: 117 NAEILFSTNPKDYPIV-----HTSFEGTEVMNYSPLVYAKNKTNVAITG-KGTLNGQANS 170
Query: 179 --WWIKYRKKQF------------------------------------NVTRPYLIEVMF 200
WW+ K + RP IE
Sbjct: 171 SNWWVWSGGKSYGWQKGNPSQNDPANREVLVDMAEKGVPVTERVFGEGRYLRPNFIEFFE 230
Query: 201 SDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNY 260
+ V I ++ +I++P W +HP+ S+N++I G+T+ + PN DG +P+ N I++
Sbjct: 231 CNTVLIKDIKIINAPFWILHPMKSNNIIIDGVTVNS--HGPNNDGCDPEYSQNIIIKNCV 288
Query: 261 IVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAED 320
+GDDC+A+KSG D G +V +P++++I++ I + +GSE+S G+ +V E+
Sbjct: 289 FNTGDDCIAIKSGRDADGRRVAIPSKNIIVQNCKMID-GHGGVVIGSEISAGVNNVFVEN 347
Query: 321 --ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY------VFWMTGDYGSHPDPG 372
+ + N +RIKT RG ++++YVR + + T+K +F+ YGS
Sbjct: 348 CIMDSPNLDRAIRIKTNSKRGGVIEDVYVRNLEVGTVKECVLKLNMFYNV--YGSQTG-- 403
Query: 373 FDPKALPTVTGINYRDMVADNVTQSAKL----DGIRNDPFTGICISNVTIKLTEKPKELQ 428
+P + I+ ++ V ++ K +G + P + + NV I+ + L+
Sbjct: 404 ---SFIPVIRNISLENVT---VKKAGKYGVWAEGYKESPVENVTLKNVVIEKADSIYLLK 457
Query: 429 WNCTNIQGITSRVTPQACE 447
N N I + + + E
Sbjct: 458 -NIKNFNFINTYINEKKVE 475
>gi|170288299|ref|YP_001738537.1| glycoside hydrolase family protein [Thermotoga sp. RQ2]
gi|170175802|gb|ACB08854.1| glycoside hydrolase family 28 [Thermotoga sp. RQ2]
Length = 446
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 195/399 (48%), Gaps = 55/399 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L DFG GD +T +++F AI LSK GG +LIVP G +LTG +L S+ L++
Sbjct: 28 LLDFGARGDERTDCSESFKRAIEELSK---QGGGRLIVPEGVFLTGPIHLKSNIELHVKG 84
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG-- 176
+ + LP + + G + +S L++ + +V +TG + ++G
Sbjct: 85 TIKFIPDPER----YLPVVLTKFEGIELYN--YSPLVYALDCKNVAITG-SGVLDGSADN 137
Query: 177 EPWWIKYRKKQF----------------------------------NVTRPYLIEVMFSD 202
E WW KK F + RP ++
Sbjct: 138 EHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQFYRCR 197
Query: 203 NVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIV 262
NV + ++ +I+SP W VHPV S NV+I+ + I + PN DGI+P+SC IE
Sbjct: 198 NVLVEDVKIINSPMWCVHPVLSENVIIRNIEISST--GPNNDGIDPESCKYMLIEKCRFD 255
Query: 263 SGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRAEDI 321
+GDD V +KSG D G ++G+P++++++R + IS S + +GSEMSGG+++V A +
Sbjct: 256 TGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVVARNN 315
Query: 322 TAINTQSGVRIKTAVGRGAYVKEI-YVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPT 380
+N + +R+KT RG Y++ I ++ + + + V + Y + + + LP
Sbjct: 316 VYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDNE-----EGEYLPV 370
Query: 381 VTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
V + +++ A + +++G+ ND I IS+ ++
Sbjct: 371 VRSVFVKNLKATGGKYALRIEGLENDYVKDIMISDTIME 409
>gi|317474867|ref|ZP_07934137.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
gi|316909005|gb|EFV30689.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
Length = 445
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/468 (27%), Positives = 204/468 (43%), Gaps = 85/468 (18%)
Query: 47 FQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSF 106
F AL + + G NT+ N I+ L+K GG L P G +LT S
Sbjct: 13 FVALQVFAERVDMREAGVDNQEALKNTEIINNTINRLNKA---GGGTLFFPSGDYLTASI 69
Query: 107 NLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVT 166
++ S+ TL + A L S + ++ + G F LI+ T+ ++ +
Sbjct: 70 HMKSNITLELEAGATLRFSDNFDDYMPFVEMRHEGVMMKS----FQPLIYATDAENITIK 125
Query: 167 GGNATINGQGEPWWIKYRK--------------------KQFN----------------- 189
G ++GQG+ WW ++ + +Q N
Sbjct: 126 G-EGKLDGQGKAWWKEFFRVLIDLRDNGKRDINKYQPLFEQANDMKTLYAETNVDWHSTL 184
Query: 190 ---VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGI 246
RP I+++ NV+I +T+++SP W V+P + NV ++G+TI + SPNTDGI
Sbjct: 185 DRRFLRPPFIQLLRCRNVRIEGITIVNSPFWTVNPNFCDNVTVKGVTINN-VPSPNTDGI 243
Query: 247 NPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALG 306
NP+SC+N I D +I GDDC+ +KSG D K+G P +++ I +S + +G
Sbjct: 244 NPESCSNVHISDCHISVGDDCITIKSGRDLQARKIGRPCENITITNCTMLSG-HGGVVIG 302
Query: 307 SEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYG 366
SEMSGG+K V + T G+RIK+ GRG V++I V + M
Sbjct: 303 SEMSGGVKKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMS------------- 349
Query: 367 SHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKE 426
D K V + Y M + ++ R F I ++ +T++ T+ P +
Sbjct: 350 -------DIKREAVVLNLKYSQMKMEKKSE-------RTPVFRNIFVTGLTVRGTQTPLK 395
Query: 427 LQ-WNCTNIQGITSRVTPQACELLPKKEPTDCFFPDDK-LPIDDVRLN 472
+ I+GI R ++ +C F D K L IDDV +N
Sbjct: 396 VDGLPEAPIEGIVFR------DIYVNDAKEECLFRDCKDLVIDDVYVN 437
>gi|423223595|ref|ZP_17210064.1| hypothetical protein HMPREF1062_02250 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638220|gb|EIY32067.1| hypothetical protein HMPREF1062_02250 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 491
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 189/404 (46%), Gaps = 55/404 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ G G TK N I K A++GG + P G +LT + ++ S+ TL++
Sbjct: 24 MKQLGADAKGIKPCTKLINQTIE---KAASEGGGTIYFPAGTYLTATIHMKSNITLHLES 80
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A++ S ++ LP + + G S LI+ + ++ +TG T++G G
Sbjct: 81 GAIVRFSDRFEDY--LPFVTARWEGTVMQ--TLSPLIYAHSADNLTITG-RGTLDGNGLK 135
Query: 179 WWI---KYRK-----------------------KQFNVT------------RPYLIEVMF 200
WW+ + RK K ++ RP I+
Sbjct: 136 WWLWEFETRKVIKENGGKLPSLDKLQQMWVDANKDLEISDYYKPSLERKMFRPPFIQFYE 195
Query: 201 SDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSP---NTDGINPDSCTNTRIE 257
N+ I N+ +I+SP W V+P + NV I G+TI P +P NTDGINP SC N RI
Sbjct: 196 CTNILIENVKIINSPFWTVNPAFCDNVTIHGVTINNPSSNPKGPNTDGINPSSCRNVRIS 255
Query: 258 DNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVR 317
D +I GDDC+ +KSG D G K G +++ I I +S + +GSEMSGG+K +
Sbjct: 256 DCFISVGDDCITIKSGRDADGRKYGKACENITITNCIMLS-GHGGVVIGSEMSGGVKRIA 314
Query: 318 AEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK---YVFWMTGDYGSHPDPGFD 374
+ T +G+R+K + GRG V++I V + MK ++ ++F + D S +P
Sbjct: 315 ISNCVFDGTNAGIRLKASRGRGGVVEDIRVDNIVMKNIQGDAFIFDLFYDRLSKVEP--V 372
Query: 375 PKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
+ P I+ ++ +++ + + GI P + + SN+ I
Sbjct: 373 SERTPIFRNIHLSNVTGNDIKRIGYIKGIEEMPISELSFSNMNI 416
>gi|375100883|ref|ZP_09747146.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661615|gb|EHR61493.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 460
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/411 (29%), Positives = 207/411 (50%), Gaps = 55/411 (13%)
Query: 58 VLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLT-GSFNLTSHFTLYI 116
++TDFG VGDG+T + A AI+ GG ++++P G W + G +L SH L++
Sbjct: 57 LVTDFGAVGDGRTDSHDAITAAIAAAHTD---GGGRVVLPEGTWRSDGPLHLESHIELHV 113
Query: 117 HKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG 176
A L+ D +++ LP + + G + G +S LI+ ++ DV +TG N I+G
Sbjct: 114 SDGAHLIFGPDPADY--LPAVHTRWEGTEMYG--YSPLIYAHDVHDVAITG-NGVIDGNP 168
Query: 177 EPWW---------------------IKYRKKQF---NVTRPYLIEVMFSDNVQISNLTLI 212
+ + + ++QF + RP +I++ ++ V +++ T+
Sbjct: 169 DSEFHTWTDKQDADVQALRRMGFDGVPLEQRQFGEGHHLRPSMIQIFDAERVLLADYTVR 228
Query: 213 DSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKS 272
+SP W H VY+ + +++GLT+ + +PN DG++ DS T+ IE N +GDD V VKS
Sbjct: 229 NSPFWINHLVYTDDAVVRGLTVDSH--NPNNDGVDVDSSTDVLIEHNTFRTGDDSVVVKS 286
Query: 273 GWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRI 332
G D+ G +G P++++++R D IALGSEMSGGI V D T + + +R
Sbjct: 287 GRDKDGRDIGRPSRNVVVRHNDMGGED--GIALGSEMSGGISHVYFTDNTLRSGAAAIRF 344
Query: 333 KTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVAD 392
K + RG V+ I VR + + + + W DY PG P V YRD+V
Sbjct: 345 KGNLDRGGTVEHIRVRNFDIDSFERLIWFQLDY-----PGELGGDFPPV----YRDIVFS 395
Query: 393 NVTQSA-----KLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGIT 438
+ T ++ ++ G P + + N+T+ T+ P L N++ +T
Sbjct: 396 DFTVTSADTLLEIHGPDAAPLRDVTLRNITVAHTDTPMILD----NVEDLT 442
>gi|335034438|ref|ZP_08527786.1| polygalacturonase-like protein [Agrobacterium sp. ATCC 31749]
gi|333794034|gb|EGL65383.1| polygalacturonase-like protein [Agrobacterium sp. ATCC 31749]
Length = 517
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 170/376 (45%), Gaps = 36/376 (9%)
Query: 67 DGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQ 126
+G +N A A++ A G L + PG W L S TL++ + A+L A
Sbjct: 101 EGARANATALENAVA-----AVPAGGTLRLGPGVWTAFPVRLKSEMTLHLAEGAVLRAPS 155
Query: 127 DESEWPLLPPLPSYGR--GRDE--PGGRFSSLIFGTNLTDVVVTGGNATINGQGEP--WW 180
+ WP+LP GR G E P F++ + ++V+ G ++G G+ WW
Sbjct: 156 VRNSWPILPARDEAGRMLGSWEGLPDACFAAPVDAIGADNLVIEG-RGILDGSGDKGDWW 214
Query: 181 IKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDS 240
++ + RP + ++ Q+ T+ ++ SW +HP ++ GLTI AP DS
Sbjct: 215 SWPKETRDGARRPRGLHLVSCRKTQLLGFTIRNAASWTIHPQGCEDLTAAGLTIIAPHDS 274
Query: 241 PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGW-------DEYGIKVGMPTQHLIIRRL 293
PNTDG NP+SC N I GDDC+AVK+G D G+ +H +++R
Sbjct: 275 PNTDGFNPESCRNVMISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRGISVRHCLMQR- 333
Query: 294 ICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMK 353
+ +GSEMSGG+ DV ED I T G+R+KT GRG V I +RR+ +
Sbjct: 334 -----GHGGLVIGSEMSGGVHDVTVEDCDMIGTDRGLRLKTRRGRGGIVSNITMRRVLLD 388
Query: 354 TMKYVFWMTGDYGSHPD----------PGFDPKALPTVTGINYRDMVADNVTQSAKLD-G 402
++ Y D P P V GI D+ N+ +A + G
Sbjct: 389 GVQTALSANAHYHCDADGHDDWVQSRNPAPVNDGTPFVDGITVEDVEIRNLAHAAGVFLG 448
Query: 403 IRNDPFTGICISNVTI 418
+ P I + N+TI
Sbjct: 449 LPEAPIRNIVVRNLTI 464
>gi|374983540|ref|YP_004959035.1| glycoside hydrolase family protein [Streptomyces bingchenggensis
BCW-1]
gi|297154192|gb|ADI03904.1| glycoside hydrolase family 28 [Streptomyces bingchenggensis BCW-1]
Length = 475
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 206/415 (49%), Gaps = 56/415 (13%)
Query: 54 KHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFT 113
+ + +TD+G VGDG+T NT+AF AI++ + GG ++VP G++LTG+ +L S
Sbjct: 59 RRTFTITDYGAVGDGQTMNTEAFRAAIADCHR---AGGGHVLVPEGRFLTGAIHLRSGVD 115
Query: 114 LYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATIN 173
L++ + A + S D ++ LP + + R +S I+ +V VT G T++
Sbjct: 116 LHVTEGATIAFSPDPRDF--LPVV--FTRWEGTECYNYSPFIYAYGERNVAVT-GPGTLD 170
Query: 174 GQGE--PWWIKYR-----------------------KKQF---NVTRPYLIEVMFSDNVQ 205
GQ PW YR ++ F + RP +++ NV
Sbjct: 171 GQARLGPWESWYRTSGPQGPDQSLLRRMGSAGVPVAERVFGDGHYLRPKMVQFYRCRNVL 230
Query: 206 ISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGD 265
+S LT++D P W VHPV S+NV ++ +T+ + + NTDG +P+ C++ I + D
Sbjct: 231 VSGLTIVDPPMWTVHPVLSTNVTVRDITVDSTLY--NTDGCDPECCSDVLITGCRFNTND 288
Query: 266 DCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN 325
DCVAVKSG DE G +VG+P++++++R S + +GSEMSGG++D+ AE+ IN
Sbjct: 289 DCVAVKSGRDEDGHRVGVPSRNIVVRDCR-FSGRWGGMTVGSEMSGGVRDIFAENC-EIN 346
Query: 326 T---------QSGVRIKTAVGRGAYVKEIYVRRMTMKTM-KYVFWMTGDYGSHPDPGFDP 375
+ + + +K + RG + +++R T + + + ++ +Y G +
Sbjct: 347 SPDFPGRYPVKHALYVKASKKRGGCIDGVHIRNFTGQNVEREAVFVNMNYN-----GGEG 401
Query: 376 KALP-TVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQW 429
LP +V I+ M D +L G+ D G+ +S T P + +
Sbjct: 402 GTLPVSVRNIHMDRMEIDGARAVLQLVGLETDHLRGVSLSRSTFTGILNPDSIAY 456
>gi|423223572|ref|ZP_17210041.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638197|gb|EIY32044.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 551
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 169/342 (49%), Gaps = 54/342 (15%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
LTDFGG GDG T N++AF AI L A+ GG +LIVP G WLTG L ++ L++
Sbjct: 51 LTDFGGSGDGVTLNSEAFEKAIQYL---ASKGGGRLIVPQGVWLTGPIELENNVELHLSD 107
Query: 119 DALLLASQDESEWPLL-------------PPLPSY--------GRGRDEPGGRFSSLIFG 157
+++++ SQD+S +P++ P L + G+G + G L
Sbjct: 108 NSIVVFSQDKSLYPIVETVFEGCKTFRCKPQLSAVRKSNVAVTGKGIIDGAGDIWRLGKK 167
Query: 158 TNL-----TDVVVTGGNATINGQGEPWW---IKYR---------------KKQFNVTRPY 194
+ + + +GG ++ GE W+ YR + F R +
Sbjct: 168 NEMPPMVWNECIQSGG--ILSEDGELWYPTESYYRGAKDAIQNIVPWAKTMEDFESVRDF 225
Query: 195 LIEVMFS----DNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDS 250
L VM + D V + + +SP WNVH S ++++ + +R P + N DGI+ +S
Sbjct: 226 LRPVMVNFRECDGVLLEGIVFQNSPCWNVHLSLSRDIIVHNIAVRCPWYAKNGDGIDIES 285
Query: 251 CTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMS 310
CTN + D++ GDD + +KSG DE G + G+P ++I+ +C +GSEMS
Sbjct: 286 CTNLLLTDSWFDVGDDAICIKSGKDEEGRRRGIPASNIIVDNCVCYH-GHGGFVVGSEMS 344
Query: 311 GGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
GG+K++ + T G+R K+ GRG V+ IY++ + M
Sbjct: 345 GGVKNIAVSNCRFSGTDVGLRFKSKRGRGGVVENIYIKNIMM 386
>gi|325106070|ref|YP_004275724.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974918|gb|ADY53902.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 552
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 170/353 (48%), Gaps = 63/353 (17%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
+K + +T++G DG + NT A N AIS+ SK GG ++VP G WLTG L ++
Sbjct: 42 KKDTFNITNYGAKPDGISLNTDAINKAISDCSK---KGGGVVLVPNGYWLTGPIKLQNNV 98
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
L++ K+ALL S++ ++ L+ G +P R S I G N+++V +TG I
Sbjct: 99 NLHLKKNALLQFSKNFDDYKLVE-----GVYEGKPSARNESPIMGVNVSNVAITG-QGII 152
Query: 173 NGQGEP-------------------------------WWIKYRKKQF------------- 188
+G G+ W+ + K+
Sbjct: 153 DGNGDAWRMVRTSDLTEYEWKAKIAKGEGILSEDKKRWYPSEKNKRGHDQNISFWLGPGV 212
Query: 189 ---------NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPID 239
+ RP LI + NV + +T +SP+WNVHP+ N+ ++GL I+ P
Sbjct: 213 KLSDFEPVKDFLRPNLIVLNNCKNVLLEGVTFQNSPAWNVHPIMCENLTLRGLFIKNPDY 272
Query: 240 SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPD 299
+ N DG + +SC N +E GDD + +KSG DE G K G+ T+++IIR +
Sbjct: 273 AHNGDGADIESCKNVLVEHCIFDVGDDAICIKSGKDEEGRKRGIATENVIIRNN-TVYKG 331
Query: 300 SAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+GSEMSGG K++ D T + T G+R KT+ GRG V+ I+++ + M
Sbjct: 332 HGGFVVGSEMSGGAKNIFVYDCTFMGTDKGIRFKTSRGRGGVVENIFIKDINM 384
>gi|409199011|ref|ZP_11227674.1| endopolygalacturonase [Marinilabilia salmonicolor JCM 21150]
Length = 568
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 130/473 (27%), Positives = 208/473 (43%), Gaps = 107/473 (22%)
Query: 55 HSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTL 114
++ + +FG VGD T N +AF AI +S+ GG ++IVP G WLTG + S+ L
Sbjct: 57 YAVSIVEFGAVGDAVTPNGEAFTRAIEQVSE---KGGGRVIVPRGIWLTGPIQMKSNINL 113
Query: 115 YIHKDALLLASQDESEWPLLPP----LPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNA 170
++ A++ S + E+PL+ L +Y R S I NL ++ +TG N
Sbjct: 114 HLEDGAVIRFSSNFDEYPLIKTSFEGLDTY---------RCISPIHAHNLENIAITG-NG 163
Query: 171 TINGQGEPW-----------------------------WIKYRKKQ-------FNV---- 190
I+G G+ W W K + FNV
Sbjct: 164 VIDGNGDAWRPVKKSKMTPSQWKKLVQSGGVLSDDGKIWYPSEKSKAGDGRDNFNVPDFD 223
Query: 191 -----------TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPID 239
RP ++ + + + T +SP+WN+HP+ S +V I+ LTIR P
Sbjct: 224 NRDAFEEVKDFLRPVMVSIKECKRILLDGPTFQNSPAWNIHPLMSEDVTIRNLTIRNPWY 283
Query: 240 SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPD 299
S N DG++ +SC N I +N GDD + KSG +E G + G+PT+++I++ I +
Sbjct: 284 SQNGDGLDLESCKNVVIYNNTFDVGDDAICFKSGKNEDGRRRGIPTENVIVKNNI-VYHG 342
Query: 300 SAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM-----KT 354
+GSEMSG +++V D T + T G+R K+ GRG V+ IY+ + M +
Sbjct: 343 HGGFVVGSEMSGDVRNVHVSDCTFMGTDVGLRFKSTRGRGGVVENIYISNIDMIDIPTEP 402
Query: 355 MKYVFWMTG-----DYGSHPDPGFDPKALPTVTGI--NYRDMVADNVT------------ 395
+++ + G D G + P +P +VT ++R++ N+
Sbjct: 403 IRFNLFYGGNAPVMDDGDNSAPSEEPAEAVSVTEETPSFRNIFMKNIRANGFGNAAFFMG 462
Query: 396 ------QSAKLD--------GIRNDPFTGICISNVTIKLTEKPKELQWNCTNI 434
Q+ L+ GI GI + NV + E P L +N NI
Sbjct: 463 LPEMNLQNVHLENAVLRGAQGISIIDADGIKMRNVKVTADEGPAFLIYNGKNI 515
>gi|357051036|ref|ZP_09112232.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
gi|355380661|gb|EHG27797.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
Length = 437
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 181/367 (49%), Gaps = 23/367 (6%)
Query: 72 NTKAFNTAISN-LSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESE 130
N K+ I + + GG +L+ G + TGS L S+ L++ A+L S D E
Sbjct: 12 NEKSVTATIQGYIDQLHQAGGGRLMFASGVYPTGSLMLKSNVELHLQPGAVLRFSDDPKE 71
Query: 131 WPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRK--KQF 188
+P++ R ++S I+ ++ +TG TI+GQG+ WW +R +Q
Sbjct: 72 YPVV-----VSRWEGVKREVYASCIYADGAENIAITGF-GTIDGQGQKWWDVFRNHPEQL 125
Query: 189 NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINP 248
RP LI + + +++L++SPSW V+P+ ++ + + I+ P DSPNTDGI+P
Sbjct: 126 EYPRPKLISFDSCQQITLRDVSLVNSPSWTVNPILCQDITVDNIKIKNPADSPNTDGIDP 185
Query: 249 DSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSE 308
+SC N RI + I GDDC+A+KSG +E +V +++ I + + LGSE
Sbjct: 186 ESCKNVRISNCLIDVGDDCIAIKSGTEETKERVS--CENITISNCQMLH-GHGGVVLGSE 242
Query: 309 MSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSH 368
MSG I++V + +T G+R+K+ GRG +++I V + M + F + Y
Sbjct: 243 MSGDIRNVTISNCIFQDTDRGIRLKSRRGRGGVIEDIRVNNLIMDNVICPFTLNLYYFCG 302
Query: 369 P----------DPGFDPKALPTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNVT 417
P +P + P I++ ++ A NV +A + G+ + I V
Sbjct: 303 PKGKEKYVWDKNPYPISEETPQFRRIHFVNISARNVHAAAGFIYGLSEQFISDISFHEVA 362
Query: 418 IKLTEKP 424
I + ++P
Sbjct: 363 ISMAKEP 369
>gi|257869845|ref|ZP_05649498.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
gi|257804009|gb|EEV32831.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
Length = 437
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 181/367 (49%), Gaps = 23/367 (6%)
Query: 72 NTKAFNTAISN-LSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESE 130
N K+ I + + GG +L+ G + TGS L S+ L++ A+L S D E
Sbjct: 12 NEKSVTATIQGYIDQLHQAGGGRLMFASGVYPTGSLMLKSNVELHLQPGAVLRFSDDPKE 71
Query: 131 WPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRK--KQF 188
+P++ R ++S I+ ++ +TG TI+GQG+ WW +R +Q
Sbjct: 72 YPVV-----VSRWEGVKREVYASCIYADGAENIAITGF-GTIDGQGQKWWDVFRNHPEQL 125
Query: 189 NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINP 248
RP LI + + +++L++SPSW V+P+ ++ + + I+ P DSPNTDGI+P
Sbjct: 126 EYPRPKLISFDSCQQITLRDVSLVNSPSWTVNPILCQDITVDNIKIKNPADSPNTDGIDP 185
Query: 249 DSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSE 308
+SC N RI + I GDDC+A+KSG +E +V +++ I + + LGSE
Sbjct: 186 ESCKNVRISNCLIDVGDDCIAIKSGTEETKERVS--CENITISNCQMLH-GHGGVVLGSE 242
Query: 309 MSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSH 368
MSG I++V + +T G+R+K+ GRG +++I V + M + F + Y
Sbjct: 243 MSGDIRNVTISNCIFQDTDRGIRLKSRRGRGGIIEDIRVNNLIMDNVICPFTLNLYYFCG 302
Query: 369 P----------DPGFDPKALPTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNVT 417
P +P + P I++ ++ A NV +A + G+ + I V
Sbjct: 303 PKGKEKYVWDKNPYPISEETPQFRRIHFVNISARNVHAAAGFIYGLSEQFISDISFHEVA 362
Query: 418 IKLTEKP 424
I + ++P
Sbjct: 363 ISMAKEP 369
>gi|224536535|ref|ZP_03677074.1| hypothetical protein BACCELL_01410 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521791|gb|EEF90896.1| hypothetical protein BACCELL_01410 [Bacteroides cellulosilyticus
DSM 14838]
Length = 491
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 186/407 (45%), Gaps = 61/407 (14%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ G G TK N I K A++GG + P G +LT + ++ S+ TL++
Sbjct: 24 MKQLGADAKGIKPCTKLINQTIE---KAASEGGGTIYFPAGTYLTATIHMKSNITLHLES 80
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A++ S ++ LP + + G S LI+ + ++ +TG T++G G
Sbjct: 81 GAIVRFSDRFEDY--LPFVTARWEGTVMQ--TLSPLIYAHSADNLTITG-RGTLDGNGLK 135
Query: 179 WWI-----------------------------------------KYRKKQFNVTRPYLIE 197
WW+ +K F RP I+
Sbjct: 136 WWLWEFETRKVIKENGGKLPSLDKLQQMWVDANNDLEISDYYKPSLERKMF---RPPFIQ 192
Query: 198 VMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSP---NTDGINPDSCTNT 254
N+ I N+ +I+SP W V+P + NV I G+TI P +P NTDGINP SC N
Sbjct: 193 FYECTNILIENVKIINSPFWTVNPAFCDNVTIHGVTINNPSSNPKGPNTDGINPSSCRNV 252
Query: 255 RIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIK 314
RI D +I GDDC+ +KSG D G K G +++ I I +S + +GSEMSGG+K
Sbjct: 253 RISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCIMLS-GHGGVVIGSEMSGGVK 311
Query: 315 DVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK---YVFWMTGDYGSHPDP 371
+ + T +G+R+K + GRG V++I V + MK ++ ++F + D S +P
Sbjct: 312 RIAISNCVFDGTNAGIRLKASRGRGGVVEDIRVDNIVMKNIQGDAFIFDLFYDRLSKVEP 371
Query: 372 GFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
+ P I+ ++ +++ + + GI P + + SN+ I
Sbjct: 372 --VSERTPIFRNIHLSNVTGNDIKRIGYIKGIEEMPISELSFSNMNI 416
>gi|397691340|ref|YP_006528594.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
gi|395812832|gb|AFN75581.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
Length = 495
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 172/339 (50%), Gaps = 64/339 (18%)
Query: 70 TSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDES 129
T NT A N AI+ S+ +GG ++IVP G WLTG + S+ L++ K A++ +++
Sbjct: 2 TKNTDAINKAIAACSE---NGGGKVIVPAGIWLTGPIEMKSNVNLFLEKGAMIQFTKNFD 58
Query: 130 EWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPW---------- 179
++PL+ L +Y G ++ R S I G NL ++ +TG I+G G+ W
Sbjct: 59 DYPLV--LTTY-EGTEQY--RCQSPISGWNLENIAITG-YGVIDGGGDAWRYVKKSKLTE 112
Query: 180 --WIK-----------------------------------------YRKKQFNVTRPYLI 196
W K YRK + + RP ++
Sbjct: 113 SQWKKLVSSGGVVDKKNQWWPSEQAMNGQRILDSLLEANGELTKEDYRKVR-DYLRPVMV 171
Query: 197 EVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRI 256
++ N+ + +T +SP+WN+HP+ S N++++ +T+R P S N DGI+ +SC N I
Sbjct: 172 NLVKCKNILLEGVTFQNSPAWNIHPLMSENIILKNVTVRNPWYSQNGDGIDVESCKNVVI 231
Query: 257 EDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDV 316
D GDD + +KSG +E+G K G+PT+++II I + +GSEMSGG++++
Sbjct: 232 YDCKFDVGDDAICMKSGKNEFGRKRGIPTENVIIADCI-VYHGHGGFTIGSEMSGGVRNI 290
Query: 317 RAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTM 355
+ + I T G+R K+ GRG V+ IY+ + MK +
Sbjct: 291 KVTNCNFIGTDIGLRFKSTRGRGGVVENIYIDNIYMKDI 329
>gi|255594301|ref|XP_002536062.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223521016|gb|EEF26321.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 412
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 202/404 (50%), Gaps = 42/404 (10%)
Query: 45 IEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTG 104
+ F A +C + +G GDG T +T A AI + + AA GG ++ +++G
Sbjct: 16 LAFAAKSCD-----VKAYGATGDGVTKDTAAIQKAIDDCA--AAGGGTVVLAGAPMYVSG 68
Query: 105 SFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVV 164
L SH TL I L S++ ++PL+ L GR +P L+ TD+
Sbjct: 69 PLVLKSHITLSIATGTTLAGSEEHDDYPLIEELRESGR---QP------LLSSDKATDIT 119
Query: 165 VTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYS 224
+ GG TI+G+G+ WW + RP LI S ++ + N+T+ +SPSW + P YS
Sbjct: 120 INGG-GTIDGRGQSWW---PDRSAANKRPRLIVFRHSSHILMENITVQNSPSWQIVPYYS 175
Query: 225 SNVLIQGLTIRAPID-SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGW------DEY 277
++++ + +T+ AP S NTDGI+P S ++ IE I +GDD +A+KSG DE
Sbjct: 176 TDLVFRNMTVYAPDRVSHNTDGIDPFSSSHVLIEHVTIDTGDDNIAIKSGQPNSPGGDE- 234
Query: 278 GIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVG 337
P+ ++IR + +++GSE++GG+ +V AE I T +GVRIK+
Sbjct: 235 ------PSHDIVIRDSTFLH--GHGLSIGSEVAGGVYNVLAERIHFKGTGTGVRIKSNRD 286
Query: 338 RGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKAL----PTVTGINYRDMVADN 393
RG +K R + M+ + ++ Y PD D + + P + I ++ A
Sbjct: 287 RGNELKHFVYRDLKMEDVNTPILISEFYPKIPDV-IDSQPVGRLTPRFSDITIENLTATG 345
Query: 394 VTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGI 437
Q+A + G+ P TG+ ++NV IK +K +++ + +G
Sbjct: 346 ARQAAIIVGLPESPVTGLKLTNVRIK-ADKGAVIKYAHMDTKGF 388
>gi|29121121|gb|AAO62947.1| putative polygalacturonase-like protein [Lactuca sativa]
gi|29121352|gb|AAO62948.1| putative polygalacturonase-like protein [Lactuca sativa]
Length = 193
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 120/194 (61%), Gaps = 2/194 (1%)
Query: 244 DGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAI 303
DGI+PDS ++ IED+YI +GDD VAVKSGWD+YGIK P+ + IRRL SP A I
Sbjct: 1 DGIDPDSSSHVCIEDSYISTGDDLVAVKSGWDQYGIKYARPSNDITIRRLTGSSP-FAGI 59
Query: 304 ALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTG 363
A+GSE SGG+ +V AE IT N G+ +KT +GRG ++ I V + M ++ ++
Sbjct: 60 AIGSETSGGVYNVLAEHITLKNMGIGIHLKTNIGRGGIIRNITVSDVYMVNVRKGIKISA 119
Query: 364 DYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKL-TE 422
D G HPD ++P ALP + + +++ V Q+ + G++N PFT IC+SN+ ++
Sbjct: 120 DVGDHPDKNYNPNALPVLKHVRIKNVWGKKVQQAGLIHGLKNSPFTDICLSNINLQGPII 179
Query: 423 KPKELQWNCTNIQG 436
+ + W C+ + G
Sbjct: 180 STRNVPWKCSYVSG 193
>gi|374376429|ref|ZP_09634087.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373233269|gb|EHP53064.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 517
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 191/392 (48%), Gaps = 47/392 (11%)
Query: 66 GDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLAS 125
G K S+ KA ++ AA GG + P GK+LTG +L S+ T+ I A L S
Sbjct: 29 GAKKNSSIKATKAIEKTITAAAAAGGGTVYFPAGKYLTGPIHLKSNITILIDAGAELHFS 88
Query: 126 QDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW----- 180
D ++ LP + S G D FS L + + ++ +TG I+G G+ WW
Sbjct: 89 DDFDDY--LPMVESRYEGVDVTS--FSPLFYANGVENIAITG-RGVIDGHGKKWWDFVEG 143
Query: 181 -----------IKYRKKQFNVT-------------RPYLIEVMFSDNVQISNLTLIDSPS 216
+++ ++ N+ RP I+ + S N+ I + + +SP
Sbjct: 144 YKEGQPRTKWQLEFDRRNKNILLPDDPRQMKRGFLRPPFIQFLHSKNILIEGIMIRNSPF 203
Query: 217 WNVHPVYSSNVLIQGLTIRAP-IDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWD 275
W ++P + NV + +TI P ++PNTDGINP+SC+N I D +I GDDC+ +KSG D
Sbjct: 204 WTINPGFCENVTVHAVTINNPGSNAPNTDGINPESCSNVHISDCHISVGDDCITIKSGKD 263
Query: 276 EYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTA 335
G P ++ I + + +GSEMSGG+K + + T G+RIKTA
Sbjct: 264 IPGRSKNRPAENYTITNCTMLR-GHGGVVIGSEMSGGVKKIAISNCIFDGTDRGIRIKTA 322
Query: 336 VGRGAYVKEIYVRRMTMKTM-KYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNV 394
GRG V++I V + MK + + + +Y + +P + T T +R++ N+
Sbjct: 323 RGRGGVVEDIRVSNIVMKNIAEQAIVLDMEYAKGAE---EPVSERTPT---FRNIRLSNI 376
Query: 395 T----QSAKLDGIRNDPFTGICISNVTIKLTE 422
T Q+ ++GIR P +GI +++V + +
Sbjct: 377 TAYTNQALLINGIREMPVSGISLNDVVFEARQ 408
>gi|390944044|ref|YP_006407805.1| endopolygalacturonase [Belliella baltica DSM 15883]
gi|390417472|gb|AFL85050.1| endopolygalacturonase [Belliella baltica DSM 15883]
Length = 570
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 166/346 (47%), Gaps = 62/346 (17%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ + G V DG T NT+AF AI + A+ GG +++VP G WLTG S+ L++
Sbjct: 62 ILEHGAVSDGVTKNTEAFAKAIDAV---ASKGGGKVLVPRGIWLTGPIQFKSNINLHLEA 118
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
AL+L S+D ++PL+ + G + R S I+ + ++ +TG T++G G+
Sbjct: 119 GALILFSKDFDDYPLIE---TSFEGLNTV--RCISPIYADGVENIAITG-TGTLDGNGDA 172
Query: 179 WWIKYRKK-------------------------------------QFNV----------- 190
W + K FNV
Sbjct: 173 WRPVKKSKMTSSQWKSLLASGGLLNEKGDMWFPSESSIKGYQASSNFNVPDLIDPSELET 232
Query: 191 ----TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGI 246
RP ++ + S + + T +SP+WN+HP+ S +++I+ L +R P S N DG+
Sbjct: 233 VKDFLRPVMVSIKNSKRILLDGPTFQNSPAWNIHPLMSEDIIIRNLNVRNPWYSQNGDGL 292
Query: 247 NPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALG 306
+ +SC N I DN GDD + KSG D+ G GMPT++++++ I + +G
Sbjct: 293 DLESCKNVLIYDNIFDVGDDAICFKSGKDQDGRDRGMPTENVVVKNNI-VYHGHGGFVIG 351
Query: 307 SEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
SEMSGG+++V D T + T G+R K+ GRG V+ IY+ + M
Sbjct: 352 SEMSGGVRNVHISDCTFMGTDVGLRFKSTRGRGGVVENIYISNIDM 397
>gi|255531066|ref|YP_003091438.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255344050|gb|ACU03376.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 554
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 126/477 (26%), Positives = 207/477 (43%), Gaps = 83/477 (17%)
Query: 18 KILSTLLTLGLLSPQVAECRPTKNSYTIE----FQALNCRKHSAVLTDFGGVGDGKTSNT 73
+I+S +L + LL K +Y+ + +K + + +G DG T NT
Sbjct: 3 QIVSAILAIPLLISTFQAGAQNKKAYSFDNLPVIAKTFFKKDTINILKYGAKNDGITLNT 62
Query: 74 KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPL 133
K+ N AI++ +K GG +++P G WLTG L S+ L++ K+ALL ++D ++PL
Sbjct: 63 KSINQAITDCNKR---GGGVVVIPEGLWLTGPIELKSNVNLHLKKNALLQFTKDMDQYPL 119
Query: 134 LPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQF----- 188
+ G P R S I+ +N ++ +TG ++G GE W +K +
Sbjct: 120 VE-----GNWEGLPQMRNQSPIWASNQQNIAITG-YGIVDGGGEA-WRMVKKDKLTESQW 172
Query: 189 ------------------------------------------------NVTRPYLIEVMF 200
+ RP L+ +
Sbjct: 173 KSLLASGGVVGEDNKSWYPSAKSLKGAKMKNAGVITKDKDAAFYAEIKDFLRPNLLVLNR 232
Query: 201 SDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNY 260
V + +T +SP+WN+HP+ S ++ I+ + + P + N DG++ +SC N +E +
Sbjct: 233 CKRVLLEGVTFQNSPAWNLHPLMSEDITIRNVYAKNPWYAQNGDGLDIESCKNVLVEGST 292
Query: 261 IVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAED 320
GDD + +KSG D G K MPT++++IR + +GSEMSGG K++ D
Sbjct: 293 FDVGDDGICIKSGRDAEGRKRAMPTENVVIRHS-TVYHAHGGFVIGSEMSGGAKNIFISD 351
Query: 321 ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMK---------TMKYVFW----MTGDYGS 367
T I T G+R KT GRG V+ IY R + MK M Y +TG+
Sbjct: 352 CTFIGTDIGLRFKTTRGRGGVVENIYARNINMKDIPGEAILFDMYYAAVDPVPLTGEKRE 411
Query: 368 HPDPGFDP--KALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTE 422
P P + P ++V D ++ + G+ + I + N+TIK E
Sbjct: 412 TPKVELLPVTEETPVFRKFYISNVVCDGAAKAVFIRGLPEMSISDIFLDNLTIKAKE 468
>gi|288541509|gb|ADC45581.1| glycoside hydrolase [Streptomyces nanchangensis]
Length = 433
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 205/415 (49%), Gaps = 56/415 (13%)
Query: 54 KHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFT 113
+ + +T +G VGDG+ NT+AF AI+ + GG ++VP G++LTG+ +L S
Sbjct: 15 RRTFTITHYGAVGDGQKMNTEAFRAAIAACHR---AGGGHVLVPEGRFLTGAIHLRSGVD 71
Query: 114 LYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATIN 173
L++ + A + S D ++ LP + + R +S I+ +V VT G T++
Sbjct: 72 LHVTEGATIAFSPDPRDF--LPVV--FTRWEGTECYNYSPFIYAYGERNVAVT-GPGTLD 126
Query: 174 GQGE--PWWIKYR-----------------------KKQF---NVTRPYLIEVMFSDNVQ 205
GQ PW YR ++ F + RP +++ NV
Sbjct: 127 GQARLGPWESWYRSSGPQGPDQSLLRRMGSAGVPVAERVFGDGHYLRPKMVQFYRCRNVL 186
Query: 206 ISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGD 265
+S LT++D P W VHPV S+NV ++ +T+ + + NTDG +P+ C++ I + D
Sbjct: 187 VSGLTIVDPPMWTVHPVLSTNVTVRDITVDSTLY--NTDGCDPECCSDVLITGCRFNTND 244
Query: 266 DCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN 325
DCVAVKSG DE G +VG+P++++++R S + +GSEMSGG++DV AE+ IN
Sbjct: 245 DCVAVKSGRDEDGHRVGVPSRNIVVRDC-WFSGRWGGMTVGSEMSGGVRDVFAEN-CEIN 302
Query: 326 T---------QSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDPGFDP 375
+ + + +K + RG Y+ +++R T ++++ ++ +Y G +
Sbjct: 303 SPDFPGRYPVKHALYVKASKKRGGYIDGVHIRNFTGQSVERDAVFVNMNYN-----GGEG 357
Query: 376 KALP-TVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQW 429
LP +V I+ M D +L G+ D G+ +S T P + +
Sbjct: 358 GTLPVSVRNIHMDRMEIDGARAVLQLVGLETDHLRGVSLSRSTFTGILSPDSIAY 412
>gi|218129085|ref|ZP_03457889.1| hypothetical protein BACEGG_00659 [Bacteroides eggerthii DSM 20697]
gi|217988720|gb|EEC55039.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 445
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 128/468 (27%), Positives = 203/468 (43%), Gaps = 85/468 (18%)
Query: 47 FQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSF 106
F AL + + G NT+ N I+ L+K GG L P G +LT S
Sbjct: 13 FVALQVFAERVDMREAGVDNQEALKNTEIINNTINRLNKA---GGGTLFFPSGDYLTASI 69
Query: 107 NLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVT 166
++ S+ TL + A L S + ++ + G F LI+ T+ ++ +
Sbjct: 70 HMKSNITLELEAGATLRFSDNFDDYMPFVEMRHEGVMMKS----FQPLIYATDAENITIK 125
Query: 167 GGNATINGQGEPWWIKYRK--------------------KQFN----------------- 189
G ++GQG+ WW ++ + +Q N
Sbjct: 126 G-EGKLDGQGKAWWKEFFRVLIDLRDNGKRDINKYQPLFEQANDMKTLYAETNVDWHSTL 184
Query: 190 ---VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGI 246
RP I+ + NV+I +T+++SP W V+P + NV ++G+TI + SPNTDGI
Sbjct: 185 DRRFLRPPFIQPLRCRNVRIEGITIVNSPFWTVNPNFCDNVTVKGVTINN-VPSPNTDGI 243
Query: 247 NPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALG 306
NP+SC+N I D +I GDDC+ +KSG D K+G P +++ I +S + +G
Sbjct: 244 NPESCSNVHISDCHISVGDDCITIKSGRDLQARKIGRPCENITITNCTMLS-GHGGVVIG 302
Query: 307 SEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYG 366
SEMSGG+K V + T G+RIK+ GRG V++I V + M
Sbjct: 303 SEMSGGVKKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMS------------- 349
Query: 367 SHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKE 426
D K V + Y M + ++ R F I ++ +T++ T+ P +
Sbjct: 350 -------DIKREAVVLNLKYSQMKMEKKSE-------RTPVFRNIFVTGLTVRGTQTPLK 395
Query: 427 LQ-WNCTNIQGITSRVTPQACELLPKKEPTDCFFPDDK-LPIDDVRLN 472
+ I+GI R ++ +C F D K L IDDV +N
Sbjct: 396 VDGLPEAPIEGIVFR------DIYVNDAKEECLFRDCKDLVIDDVYVN 437
>gi|393781893|ref|ZP_10370086.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
gi|392674779|gb|EIY68222.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
Length = 509
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 193/427 (45%), Gaps = 77/427 (18%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L DFG VG+G T+AF AI LS + GG LIVP G WLTG L S+ L+I K
Sbjct: 51 LPDFGAVGNGVELCTEAFEKAIETLS---SRGGGHLIVPAGIWLTGPIVLKSNIDLHIEK 107
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A++L S D +PL+ + G D R S + G NLT+V +TG A I+G G
Sbjct: 108 GAVVLFSPDVELYPLVE---TVFEGLDTR--RCQSPVSGRNLTNVAITGQGA-IDGNGHF 161
Query: 179 W----------------------------WIKY-------------------RKKQFNVT 191
W W Y ++++
Sbjct: 162 WRPLKREKVTESVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLTTEEEWQSV 221
Query: 192 RPYLIEVMFS----DNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGIN 247
R +L VM S NV + + +SP+WN+HP+ NVLI+ + +R P + N DG++
Sbjct: 222 RHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNGDGLD 281
Query: 248 PDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGS 307
+SC N I ++ GDD + +KSG DE G + +++++ + +GS
Sbjct: 282 LESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARSCENVVVDGCT-VFKGHGGFVVGS 340
Query: 308 EMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM-----KTMKYVFWMT 362
EMSGG+++V + + T G+R K+ GRG V+ I+VR ++M + + + +
Sbjct: 341 EMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWVRNVSMMDIPTEPVTFNLYYG 400
Query: 363 G-------DYGSHPDPGFDP----KALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGI 411
G + G DP + P I+ ++V N ++ +GI P GI
Sbjct: 401 GKSAVEVLESGEKVPLKVDPLPVDETTPCFRNIHISNLVCSNARRALFFNGIPEMPIDGI 460
Query: 412 CISNVTI 418
+ N+ I
Sbjct: 461 TLENLDI 467
>gi|365122251|ref|ZP_09339156.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642965|gb|EHL82299.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
Length = 561
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 162/350 (46%), Gaps = 62/350 (17%)
Query: 55 HSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTL 114
+ +T FGGVGDG T N++AF AI L K GG L++P G W TG L S+ +
Sbjct: 53 YKVTITQFGGVGDGTTLNSEAFAKAIEALEK---KGGGTLVIPQGIWYTGPIVLKSNIHI 109
Query: 115 YIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATING 174
Y+ A++L S D + L P + + G D R S I ++ +TG TI+G
Sbjct: 110 YLQGGAIILFSDD---FDLYPIVHTSFEGLDTR--RCQSPISAKGAVNIAITG-KGTIDG 163
Query: 175 QGEPW-----------------------------WIKYRKKQF----------------- 188
G+ W W K +
Sbjct: 164 NGDAWRPVKKSKLTASQWKALLQKGGVLNDKKDIWYPSAKSKLGNERSDMNVPRGLKTDE 223
Query: 189 ------NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPN 242
+ RP L+ + NV + +T +SPSWN+HP+ NV I+ LT+R P S N
Sbjct: 224 EWEEVKDFLRPVLLSFIDCTNVLLQGVTFQNSPSWNLHPLMCENVTIENLTVRNPWYSQN 283
Query: 243 TDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAA 302
DG++ +SC NT + + GDD + +KSG D G K G+P +++I+ + +
Sbjct: 284 GDGLDIESCKNTIVTNCSFDVGDDGICIKSGKDADGRKRGIPCENVIVDNCV-VYHGHGG 342
Query: 303 IALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+GSEMSGG+K++ + + T G+R K+ GRG V+ I+++ + M
Sbjct: 343 FVVGSEMSGGVKNISVSNCQFLGTDVGLRFKSTRGRGGVVENIFIKNIDM 392
>gi|357054504|ref|ZP_09115588.1| hypothetical protein HMPREF9467_02560 [Clostridium clostridioforme
2_1_49FAA]
gi|355384476|gb|EHG31541.1| hypothetical protein HMPREF9467_02560 [Clostridium clostridioforme
2_1_49FAA]
Length = 522
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 122/418 (29%), Positives = 196/418 (46%), Gaps = 45/418 (10%)
Query: 40 KNSYTI--EFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVP 97
K S+T E+ L+ R DFG GDG +T AI A +++++P
Sbjct: 70 KTSFTTDSEYVTLDVR-------DFGAKGDGIQDDTLFIQAAI-----MACPEKSRVLIP 117
Query: 98 PGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPL-PSY--------GRGRDEPG 148
G + S L + + + + A+L A D + +P+ + SY G P
Sbjct: 118 AGTYRIVSLFLKDNVNIELAEGAVLSAYTDRTRFPVFQGMIQSYDEQGEYNLGTWEGNPL 177
Query: 149 GRFSSLIFGTNLTDVVVTG-----GNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDN 203
F+ +I G N+ + V+ G GNA G GE W K RP +I +
Sbjct: 178 PMFTGIITGVNVKEAVIYGQGIIDGNA---GTGEGNWWHEPKVIHTACRPRMIFLERCRQ 234
Query: 204 VQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVS 263
V + +T+ +SPSWN+HP +S ++ L + +P DSPNTDG++P+SC + I
Sbjct: 235 VTVQGITVRNSPSWNIHPYFSDHLRFFDLKVLSPKDSPNTDGLDPESCKDVEIAGVCFSV 294
Query: 264 GDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITA 323
GDDC+AVKSG G P++++ IRR C+ ++ +GSEM+GG+KD+ +D
Sbjct: 295 GDDCIAVKSGKIYMGSTYKCPSKNISIRRC-CMRDGHGSVTIGSEMAGGVKDLTVKDCMF 353
Query: 324 INTQSGVRIKTAVGRG--AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFD----PKA 377
++T G+RIKT GRG A V +I + M + F + Y PD + +A
Sbjct: 354 LHTDRGLRIKTRRGRGKDAVVDKIVFEHIRMDHVMTPFVINCFYFCDPDGHSEYVRTKEA 413
Query: 378 LPT------VTGINYRDMVADNV-TQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQ 428
LP + + +RD+ A+N +A + G+ + + V + +E Q
Sbjct: 414 LPVDDKTPFIKSLCFRDIEAENCHVAAAYMYGLPEQRIGRVEMERVRVSYAASAREGQ 471
>gi|293375683|ref|ZP_06621956.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
gi|292645734|gb|EFF63771.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
Length = 526
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 186/382 (48%), Gaps = 24/382 (6%)
Query: 3 FCLKSRNNILHPHVIKILSTLLTLGLLSPQVAECRPTKNSYTIEF--QALNCRKHSAVLT 60
+ LK + I+ H+++ + ++ L P A N T E + + +K S L
Sbjct: 29 YTLKLNDEIIDEHLVQ---NVYSIYRLQPSTAYMVTIINEETGESLSKEVYTKKESICLN 85
Query: 61 --DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
F GDG T +T A AI + D G ++ +P G + T + L S+ TL + K
Sbjct: 86 VKHFNAKGDGITDDTLAIQAAIMS----CPDDG-RVFIPKGTYATKTIFLKSNLTLELEK 140
Query: 119 DALLLASQDESEWPLLPPLPS--------YGRGRDEPGGRFSSLIFGTNLTDVVVTGGNA 170
A LL S +LP G P F++LI G N+++V + G
Sbjct: 141 GATLLYSASFESGAILPGYTKNSNHEEYYLGSWEGNPLDTFTALIQGVNVSNVNLIG-EG 199
Query: 171 TINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQ 230
++G G W + K + RP L +++ S +V + +TL +SPSW VHP++S ++
Sbjct: 200 VLDGNGSIGWWDFPKVRNVAWRPRLFQIIHSHHVNVQGITLQNSPSWTVHPLFSDDLKFI 259
Query: 231 GLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLII 290
L I P DSPNTDG++P+SC I + GDDC+A+KSG G ++ ++++ I
Sbjct: 260 DLKIINPKDSPNTDGLDPESCHRVLILGVHFSVGDDCIAIKSGKIYLGSRLKRASEYITI 319
Query: 291 RRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG--AYVKEIYVR 348
R ++ A+ +GSEM+GG+K + E T G+RIKT GRG A V+++ R
Sbjct: 320 RNC-SMNFGHGAVVIGSEMAGGVKHILVEQCLFNETDRGLRIKTRRGRGEAAIVEDVTFR 378
Query: 349 RMTMKTMKYVFWMTGDYGSHPD 370
+ M+ + + Y PD
Sbjct: 379 HIEMEKVLTPLVVNCFYFCDPD 400
>gi|418299606|ref|ZP_12911438.1| polygalacturonase-like protein [Agrobacterium tumefaciens
CCNWGS0286]
gi|355534759|gb|EHH04058.1| polygalacturonase-like protein [Agrobacterium tumefaciens
CCNWGS0286]
Length = 517
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 168/376 (44%), Gaps = 36/376 (9%)
Query: 67 DGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQ 126
+G +N +A A++ + + G L + G W L S+ ++ + A+L A
Sbjct: 101 EGARANAQALERAVAAVPQ-----GGTLRLAAGVWTASPVRLKSNMAFHLAQGAVLRAPS 155
Query: 127 DESEWPLLPPLPSYGR--GRDE--PGGRFSSLIFGTNLTDVVVTGGNATINGQGEP--WW 180
WP+LP GR G E P F++ + + ++V+ G ++G G+ WW
Sbjct: 156 TRRGWPILPARDEAGRMLGSWEGLPDACFTAPVHAIGVDNLVIEG-RGILDGSGDKGDWW 214
Query: 181 IKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDS 240
++ + RP + ++ + T+ ++ SW +HP +++ GL+I AP DS
Sbjct: 215 RWPKETRDGARRPRGLHLVSCRKTNLLGFTIRNAASWTIHPQGCEDLIAAGLSIAAPHDS 274
Query: 241 PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGW-------DEYGIKVGMPTQHLIIRRL 293
PNTDG NP+SC N I GDDC+AVK+G D G+ H ++ R
Sbjct: 275 PNTDGFNPESCRNVTISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRGVRVGHCLMER- 333
Query: 294 ICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMK 353
+ +GSEMSGG+ DV ED I T G+R+KT GRG V I +RR+ +
Sbjct: 334 -----GHGGLVIGSEMSGGVHDVAVEDCDMIGTDRGLRLKTRRGRGGAVSNIAMRRVLLD 388
Query: 354 TMKYVFWMTGDYGSHPD----------PGFDPKALPTVTGINYRDMVADNVTQSA-KLDG 402
+K Y D P P + GI D+ N++ +A G
Sbjct: 389 GVKTALSANAHYHCDADGHDDWVQSRNPAPVDSGTPFIDGITVEDVEIRNLSHAAGAFLG 448
Query: 403 IRNDPFTGICISNVTI 418
+ P + I NVTI
Sbjct: 449 LAEAPIRNVTIRNVTI 464
>gi|346224313|ref|ZP_08845455.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 572
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 187/413 (45%), Gaps = 79/413 (19%)
Query: 5 LKSRNNILHPHVIKILSTLLTLGLLSPQVAECRPTKNSYT-----IEFQALNCRK----- 54
++ RN V+ +++ + G + R + Y+ IEF +
Sbjct: 1 MRVRNVFWRISVLLLVTEVFLTGGFACSEKNERDDQADYSFIYDNIEFDMPRVEEPVFPD 60
Query: 55 HSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTL 114
++ + DFG VGDG N+ AF AI N+S+ GG +++VP G WLTG + S+ L
Sbjct: 61 YAVSIVDFGAVGDGVFDNSDAFAQAIDNVSE---KGGGRVVVPRGLWLTGPIIMKSNIDL 117
Query: 115 YIHKDALLLASQDESEWPLL----PPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNA 170
++ A++ S D ++PL+ L +Y R S + L ++ TG N
Sbjct: 118 HLEDGAVVHFSSDFDDYPLIDTSFEGLNTY---------RCMSPVHAHGLENIAFTG-NG 167
Query: 171 TINGQGEPW------------WIKY------------------------RKKQFNV---- 190
+G G+ W W K + FNV
Sbjct: 168 IFDGNGDAWRPVKKSKMTESQWKKLVNSGGVLSDDGEIWYPSEKSKAGDSRDNFNVPDLK 227
Query: 191 -----------TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPID 239
RP ++ + V + T +SP+WN+HP+ S +++I+ LT+R P
Sbjct: 228 TKEDFEKIKDFLRPVMVSIKGCKQVLLDGPTFQNSPAWNIHPLMSRDIIIRNLTVRNPWY 287
Query: 240 SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPD 299
S N DG++ +SC N I +N GDD + KSG +E G + G+PT+++I++ + +
Sbjct: 288 SQNGDGLDLESCKNVLIYNNSFDVGDDAICFKSGKNEDGRRRGVPTENVIVKNNV-VYHG 346
Query: 300 SAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+GSEMSGG+++V + T I T G+R K+ GRG V+ IY+ + M
Sbjct: 347 HGGFVIGSEMSGGVRNVHVANCTFIGTDVGLRFKSTRGRGGVVENIYIFNIDM 399
>gi|225874241|ref|YP_002755700.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
gi|225791499|gb|ACO31589.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
Length = 428
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 182/378 (48%), Gaps = 32/378 (8%)
Query: 52 CRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSH 111
C HS +G GDG + +T A AI +K GG +++ PG +L+ L S+
Sbjct: 33 CNPHS-----YGAKGDGVSKDTAAIQHAIDACAKR---GGGTVLLTPGTYLSAPIVLKSN 84
Query: 112 FTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNAT 171
TL + K A LL S D +++P + + GR SLI N +++ + G T
Sbjct: 85 ITLKLEKGATLLGSPDFNDYPAITEFRAPGR---------QSLISAQNASNITIEGA-GT 134
Query: 172 INGQGEPWWIKYRKKQ------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSS 225
ING G WW R+ + TRP LI +V + +T+ +SP W + P YS
Sbjct: 135 INGNGASWWKMAREHKDTGVMGSQYTRPRLIVFNHCKHVVLEGVTVENSPMWQIVPYYSD 194
Query: 226 NVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPT 285
+V+I+ + + AP +PNTD I+P S ++ IE GDD +A+KSG + P+
Sbjct: 195 DVIIRNIHVLAPQHAPNTDAIDPFSSSHVLIEHVVANVGDDDIAIKSG-EANSPGPDAPS 253
Query: 286 QHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEI 345
++ IR CI +++GSE++GG + + AE+IT T +G+R+K RG V ++
Sbjct: 254 TYITIRD--CIFLHGHGLSVGSEIAGGAQHILAENITMTGTDNGIRVKANRDRGNDVSDL 311
Query: 346 YVRRMTMKTMKYVFWMTGDYGS----HPD-PGFDPKALPTVTGINYRDMVADNVTQSAKL 400
+ + M +K ++ Y PD P + P I ++ A N + +
Sbjct: 312 VFKNIQMTNVKNALIISEFYPHIYPPMPDNPAPITRLTPHFHNITVENVTATNSKNAGAI 371
Query: 401 DGIRNDPFTGICISNVTI 418
G+ P + + NV+I
Sbjct: 372 AGLPEAPIRDVVLKNVSI 389
>gi|372223095|ref|ZP_09501516.1| glycoside hydrolase family protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 472
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 206/422 (48%), Gaps = 57/422 (13%)
Query: 40 KNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPG 99
++S Q + + D+G V DG NT+A AI + A GG ++++P G
Sbjct: 38 RDSIVANIQLPKFKNQEFNVMDYGAVADGSVLNTEAIAEAIKACN---AAGGGKVVLPAG 94
Query: 100 KWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTN 159
K++TG +L + L I + A +L + D+S +PL SY G + FS LI+ +
Sbjct: 95 KYVTGPIHLLDNVNLEIAEGAEVLFTTDKSLFPL--AHTSY-EGTELM--NFSPLIYAKD 149
Query: 160 LTDVVVTGGNATINGQGE-----PW-------WIKYRKKQFN------------------ 189
++ +T G +NGQ PW W + KQ +
Sbjct: 150 KKNIAIT-GKGVLNGQANNGNWWPWCGNTKYGWAEGDPKQHSSLKKLKEDMSEKGVPVAD 208
Query: 190 -------VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPN 242
RP IE +NV I ++T+I++P W VHP+ S+NV++ G+T+ + PN
Sbjct: 209 RIFGMGEFLRPTFIEPFGCENVLIKDITIINAPFWVVHPIKSNNVVVDGITVDS--HGPN 266
Query: 243 TDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAA 302
DG +P+ N I++ +GDDC+A+KSG +E G +V +P++++++ I
Sbjct: 267 NDGCDPEYAKNVWIKNCVFNTGDDCIAIKSGRNEDGRRVNIPSENIVVEDCKMID-GHGG 325
Query: 303 IALGSEMSGGIKDVRAED--ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-YVF 359
+ +GSE+S G+++V ++ + + N +RIKT RG +V+ +YVR + + +K V
Sbjct: 326 VVMGSEISAGVRNVFVQNCQMDSPNLDRAIRIKTNTKRGGFVENVYVRNINVGQVKEAVL 385
Query: 360 WMTGDYGSHPDPGFDPKA-LPTVTGINYRDMVADNVTQSAKL-DGIRNDPFTGICISNVT 417
+ YG + G + +P V+ + ++ DN + L +G P + + NVT
Sbjct: 386 KINLHYGIY---GVQKGSFMPKVSNVYLENIAVDNGGKYGVLVNGYEESPVKNVFLKNVT 442
Query: 418 IK 419
IK
Sbjct: 443 IK 444
>gi|388259231|ref|ZP_10136405.1| exo-poly-alpha-D-galacturonosidase [Cellvibrio sp. BR]
gi|387937189|gb|EIK43746.1| exo-poly-alpha-D-galacturonosidase [Cellvibrio sp. BR]
Length = 461
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 185/363 (50%), Gaps = 45/363 (12%)
Query: 58 VLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLT-GSFNLTSHFTLYI 116
V+T FG D + A AI+ +K GG ++++P GKWL+ G L S L++
Sbjct: 59 VITAFGASADAQADARPAIMRAINAAAKA---GGGRVVIPAGKWLSNGPVELQSRINLHL 115
Query: 117 HKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG 176
+ A LL S + LP + + G + G +S LI+ +TDV +TG TI+G
Sbjct: 116 EEGATLLFSAQTKHY--LPAVFTRWEGTEIYG--YSPLIYANKVTDVAITG-KGTIDGNA 170
Query: 177 EP---WWIKYR------------------KKQF---NVTRPYLIEVMFSDNVQISNLTLI 212
+ W K++ K+QF + RP LI+++ ++ V + + T +
Sbjct: 171 QSEFLGWAKHQAADIAKLRQMGFDGVPLEKRQFGEGHFLRPSLIQILNAERVLLQDYTAL 230
Query: 213 DSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKS 272
+SP W H VY+ + ++G+ + + N DG++ DS +E+N+ +GDD +A+KS
Sbjct: 231 NSPFWVNHLVYTDHAQVRGVKVDSMF--ANNDGLDIDSGRWILVENNHFRTGDDSIAIKS 288
Query: 273 GWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRI 332
G D G +G P++++++R + D + LGSEMSGGIK+V D + S R+
Sbjct: 289 GRDLDGRTIGRPSENIVVRNNLFDGED--GVGLGSEMSGGIKNVYFTDNDYLKGTSAFRL 346
Query: 333 KTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVAD 392
K + RG V+ + +R M + + KY+FW Y + G+ P+ Y+D+V +
Sbjct: 347 KANLDRGGSVEHVRIRNMKIGSAKYLFWFDLSYVA----GYLGGNFPS----RYQDIVFE 398
Query: 393 NVT 395
N+T
Sbjct: 399 NIT 401
>gi|227537592|ref|ZP_03967641.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
gi|227242594|gb|EEI92609.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
Length = 473
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 170/338 (50%), Gaps = 53/338 (15%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG GDG T NT+AF AI K A+GG +++VP G +LTG+ L S+ L++
Sbjct: 58 IADFGAKGDGVTKNTEAFRLAIE---KCHAEGGGRVVVPHGVFLTGAIYLKSNVNLHLTD 114
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+L S+D S++P++ + R +SS I+ ++ +T G T++G +
Sbjct: 115 GTTILFSRDSSDYPIV-----FTRWEGMECMNYSSFIYAYGEENIAIT-GKGTLDGNSDN 168
Query: 179 ----WWIKYRKKQFNVT---------------------------------RPYLIEVMFS 201
WW RK +N + RP ++
Sbjct: 169 DNWWWWCGARKYGWNESRSGEQKPARARLHTMMHQEVDAKQRVFGDGQYLRPNFVQPYNC 228
Query: 202 DNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYI 261
N+ I ++ +I+SP WN++PV NV I+ ++ PN DG +P++C N I+D Y
Sbjct: 229 KNILIEDIKMINSPMWNLNPVLCENVTIE--RVKVISHGPNNDGCDPEACKNVLIKDCYF 286
Query: 262 VSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRA-- 318
+GDDC+A+KSG DE G +G P ++ II CI D + +GSE++GG +++ A
Sbjct: 287 DTGDDCIAIKSGRDEDGRNIGRPAENHIIEN--CIMKDGHGGVVIGSEIAGGARNIYALN 344
Query: 319 EDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK 356
+ + N +R+KT+ RG ++ ++++ + + T K
Sbjct: 345 NKMDSPNLDRILRLKTSSSRGGIIENVFMKDVEVGTYK 382
>gi|255536015|ref|YP_003096386.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
gi|255342211|gb|ACU08324.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
Length = 491
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/434 (27%), Positives = 208/434 (47%), Gaps = 56/434 (12%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ +G V DGKT T++ AI SK DGG ++IVP GK+L+G +L ++ L++ +
Sbjct: 71 IVSYGAVADGKTMATESIRKAILACSK---DGGGKVIVPSGKFLSGPIHLENNVNLHLME 127
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG-- 176
A +L S + ++ P + + G + +S LI+ N ++ VT G +NGQ
Sbjct: 128 GAEILFSTNPDDF--YPLVHTSFEGMELM--NYSPLIYAKNKKNIAVT-GKGILNGQASN 182
Query: 177 EPWW---------------------------------IKYRKKQF---NVTRPYLIEVMF 200
+ WW + + F RP IE
Sbjct: 183 DNWWTWKGSSAYGFKPGMPSQLDPNNLPKLMEMADTNVPVSNRTFGNGRYLRPNFIEPFE 242
Query: 201 SDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNY 260
+NV I +T+I++P W +HP+ S N+++ G+ IR+ PN DG++P+ N I+++
Sbjct: 243 CENVLIQGITIINAPFWILHPIKSKNIIVDGVNIRS--HGPNNDGLDPEYSQNVLIKNSI 300
Query: 261 IVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAED 320
+GDDC+A+K+G DE G +VG+ T+++I+R I + +GSEMS G+++V +
Sbjct: 301 FNTGDDCIAIKAGRDEEGRRVGIMTENIIVRDCKMID-GHGGVVIGSEMSAGVRNVFVYN 359
Query: 321 --ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-YVFWMTGDYGSHPDPGFDPKA 377
+ + +R+KT RG V +YV+ +T+ +K V +T +Y + +
Sbjct: 360 NHMDSPELDRAIRLKTNNVRGGVVDGVYVKNLTVGEVKEAVLHITMNYKDYKNR--TGNF 417
Query: 378 LPTVTGINYRDMVADNVTQSAKL-DGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQG 436
P + I D+ N + A DG+ N I NVTI + +++ N++
Sbjct: 418 TPQIRNILLEDVKVKNGGKYAIFADGLENSKIQNITFKNVTIDKVKANFNVKF-VENLKL 476
Query: 437 ITSRVTPQACELLP 450
I +++ E P
Sbjct: 477 INTKINGAQTEYAP 490
>gi|300770984|ref|ZP_07080861.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
gi|300762257|gb|EFK59076.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
Length = 473
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 171/338 (50%), Gaps = 53/338 (15%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG GDG T NT+AF AI K A+GG +++VP G +LTG+ L S+ L++
Sbjct: 58 IADFGAKGDGVTKNTEAFRLAIE---KCHAEGGGRVVVPNGVFLTGAIYLKSNVNLHLTD 114
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+L S+D S++P++ + R +SS I+ ++ +T G T++G +
Sbjct: 115 GTTILFSRDSSDYPIV-----FTRWEGMECMNYSSFIYAYGEENIAIT-GKGTLDGNSDN 168
Query: 179 ----WWIKYRKKQFNVT---------------------------------RPYLIEVMFS 201
WW RK +N + RP ++
Sbjct: 169 DNWWWWCGARKYGWNESRSGEQKPARARLHTMMHQEVDAKQRVFGDGQYLRPNFVQPYNC 228
Query: 202 DNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYI 261
N+ I ++ +I+SP WN++PV NV I+ + + + PN DG +P++C N I+D Y
Sbjct: 229 KNILIEDIRMINSPMWNLNPVLCENVTIERVKVIS--HGPNNDGCDPEACKNVLIKDCYF 286
Query: 262 VSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRA-- 318
+GDDC+A+KSG DE G +G P ++ II CI D + +GSE++GG +++ A
Sbjct: 287 DTGDDCIAIKSGRDEDGRNIGRPAENHIIEN--CIMKDGHGGVVIGSEIAGGARNIYALN 344
Query: 319 EDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK 356
+ + N +R+KT+ RG ++ ++++ + + T K
Sbjct: 345 NKMDSPNLDRILRLKTSSSRGGIIENVFMKDVEVGTYK 382
>gi|332715898|ref|YP_004443364.1| polygalacturonase-like protein [Agrobacterium sp. H13-3]
gi|325062583|gb|ADY66273.1| polygalacturonase-like protein [Agrobacterium sp. H13-3]
Length = 531
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 168/375 (44%), Gaps = 36/375 (9%)
Query: 68 GKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQD 127
G +N +A A++ A G L G W L S T ++ + A+L A
Sbjct: 109 GARANARALEEAVA-----AVPAGGTLQFAAGLWTAFPVRLKSDMTFHLAEGAVLRAPST 163
Query: 128 ESEWPLLPPLPSYGR--GRDE--PGGRFSSLIFGTNLTDVVVTGGNATINGQGE--PWWI 181
+ WP+LP GR G E P F++ + ++V+ G ++G G+ WW
Sbjct: 164 RNGWPILPARDETGRMLGSWEGLPDACFAAPVHAIGADNLVIEG-TGVLDGSGDRGDWWS 222
Query: 182 KYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSP 241
++ + RP + ++ NV + T+ ++PSW VHP + GLTI AP +SP
Sbjct: 223 WPKETRDGARRPRGLHLVSCRNVGLFGFTIRNAPSWTVHPQGCETLKAAGLTISAPHNSP 282
Query: 242 NTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGW-------DEYGIKVGMPTQHLIIRRLI 294
NTDG NP+SC N I GDDC+AVK+G D G+ +H ++ R
Sbjct: 283 NTDGFNPESCRNVTISGVRFSVGDDCIAVKAGKRGPNGEDDHLAETRGVSVRHCLMER-- 340
Query: 295 CISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKT 354
+ +GSEMSGG+ DV ED + T G+R+KT GRG V I +RR+ +
Sbjct: 341 ----GHGGLVIGSEMSGGVHDVTVEDCDMVGTDRGLRLKTRRGRGGSVSNITMRRVLLDG 396
Query: 355 MKYVFWMTGDYGSHPD------PGFDPKAL----PTVTGINYRDMVADNVTQSAKLD-GI 403
+ Y D DP + P + GI D+ ++ +A + G+
Sbjct: 397 VHTALSANAHYHCDADGHDGWVQSRDPAPVDDGTPFIDGITVEDVEIRHLAHAAGVFLGL 456
Query: 404 RNDPFTGICISNVTI 418
P I I N+TI
Sbjct: 457 PEAPIRNIAIRNLTI 471
>gi|284005877|ref|YP_003391696.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
gi|283821061|gb|ADB42897.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 390
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 187/390 (47%), Gaps = 43/390 (11%)
Query: 30 SPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAAD 89
SPQ A+ PT S T+ A DG T K+ I A
Sbjct: 6 SPQ-AQSNPTPTSVTLHLLA-----------------DGTTDQAKSLQQTID---SCGAT 44
Query: 90 GGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGG 149
GG LIVP G++L +L S L + A LLAS + +++ P LP+
Sbjct: 45 GGGTLIVPAGRYLISPISLCSRVNLQLASGATLLASTNAADYT--PKLPN---------- 92
Query: 150 RFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNL 209
LI G +LTDV +TG TI+G G WW ++ + RP LI + S NV I L
Sbjct: 93 ----LINGDSLTDVSLTG-TGTIDGNGAVWWQRFIDSGKTLNRPRLIYLTRSRNVTIDGL 147
Query: 210 TLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVA 269
TLI+SPS+++ P NV IQ LTI AP DSPNTDGI+P +CT+ I++ I +GDD +A
Sbjct: 148 TLINSPSFHLVPSQCQNVTIQNLTITAPSDSPNTDGIDPANCTHVLIQNCTIDNGDDNIA 207
Query: 270 VKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSG 329
+K G ++ P Q + IR C +++GSE S G+ V + T T +G
Sbjct: 208 IKGGRSNG--QIVQPCQDIQIRN--CRFLHGHGLSVGSETSSGVSSVSVTNCTFTGTTNG 263
Query: 330 VRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDM 389
+RIK+ G G ++ + ++TM + + Y + + G+ +P+V+G+ +
Sbjct: 264 IRIKSQPGLGGAIQNLSYSQITMTNVTNPLIIDLAYSLNNNNGY-ASDIPSVSGLTIDQL 322
Query: 390 VADNVTQSAKLDGIRNDPFTGICISNVTIK 419
+ L G+ N + +SN+ I
Sbjct: 323 SVTGAKNAGSLVGLTNSLLQNLTLSNLQIS 352
>gi|269957316|ref|YP_003327105.1| glycoside hydrolase family 28 [Xylanimonas cellulosilytica DSM
15894]
gi|269305997|gb|ACZ31547.1| glycoside hydrolase family 28 [Xylanimonas cellulosilytica DSM
15894]
Length = 459
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 172/372 (46%), Gaps = 22/372 (5%)
Query: 81 SNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSY 140
+ + + AA GG ++ V PG TGS L SH L++ A+L D + +P P
Sbjct: 31 ARIDEAAARGGGRVTVGPGVHRTGSLRLRSHVELHVEAGAVLQFVPDPALYP-----PVE 85
Query: 141 GRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMF 200
R P ++ + V +TG G PWW +R RP L+ +
Sbjct: 86 ARWEGAPATIHQPCLYAHDAEHVAITGDGVIDGGG-GPWWEAFRAGTLAHPRPTLVGLHR 144
Query: 201 SDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNY 260
+V++ ++TL SP+W VHP+ +V ++ +TI P DSPNTDGI+P+SC N RI +
Sbjct: 145 CTHVRLRDVTLRSSPAWTVHPLLCDDVAVRDVTIVNPPDSPNTDGIDPESCRNVRISGCH 204
Query: 261 IVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAED 320
I GDDC+A+K+G + +V +++++ + + LGSEMSGGI++V D
Sbjct: 205 IDVGDDCIALKAGTEASPERVA--CENVVVTGCTLVH-GHGGVVLGSEMSGGIRNVVVAD 261
Query: 321 ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDY-----GSHPDPGFDP 375
T G+R+K GRG V+++ V + M + + Y G P G D
Sbjct: 262 CVFQGTDRGIRLKARRGRGGVVEDVRVSNVVMDDVGCPLVLNQHYDRGPGGDSPHVG-DR 320
Query: 376 KALPT------VTGINYRDMVADNVTQSAKLD-GIRNDPFTGICISNVTIKLTEKPKELQ 428
ALP I + A NV +A G+ P + + +V + P+ +
Sbjct: 321 GALPVDATTPLFRRITVAHVSARNVRAAAVFALGLAEQPVAELVLDDVAVSFAPDPEPFE 380
Query: 429 WNCTNIQGITSR 440
G T+R
Sbjct: 381 PAMAAGVGPTTR 392
>gi|408789181|ref|ZP_11200887.1| polygalacturonase-like protein [Rhizobium lupini HPC(L)]
gi|408485004|gb|EKJ93352.1| polygalacturonase-like protein [Rhizobium lupini HPC(L)]
Length = 519
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 160/352 (45%), Gaps = 31/352 (8%)
Query: 91 GAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGR--GRDE-- 146
G L + G W + L S T ++ + A+L A WP+LP G G E
Sbjct: 122 GGTLQLAAGFWTSFPIRLKSSMTFHLAEGAVLRAPASRKGWPILPACDDAGHMLGSWEGL 181
Query: 147 PGGRFSSLIFGTNLTDVVVTGGNATINGQGE--PWWIKYRKKQFNVTRPYLIEVMFSDNV 204
P F++ + TD ++ G ++G G+ WW ++ + RP + ++ +
Sbjct: 182 PDACFAAPVHAIG-TDNLIIEGRGVLDGSGDRGDWWSWPKETRDGARRPRGLHLVSCRKI 240
Query: 205 QISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSG 264
Q+ T+ ++ SW +HP +++ GLTI AP DSPNTDG NP+SC N I G
Sbjct: 241 QLLGFTIKNAASWTIHPQGCEDLIAAGLTINAPHDSPNTDGFNPESCRNVTISGVRFSVG 300
Query: 265 DDCVAVKSGW-------DEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVR 317
DDC+AVK+G D G+ +H ++ R + +GSEMSGG+ DV
Sbjct: 301 DDCIAVKAGKRSPDGEDDHLAETRGIRVRHCLMER------GHGGLVIGSEMSGGVHDVS 354
Query: 318 AEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPD------- 370
ED + T G+R+KT GRG V I +RR+ + ++ Y D
Sbjct: 355 VEDCDMVGTDRGLRLKTRRGRGGIVSNIAMRRVLLDGVQTALSANAHYHCDADGHDERVQ 414
Query: 371 ---PGFDPKALPTVTGINYRDMVADNVTQSAKLD-GIRNDPFTGICISNVTI 418
P K P + GI D+ N+ +A + G+ P + I N+TI
Sbjct: 415 SRQPAPIDKGTPFIDGIIVEDVEIRNLAHAAGVFLGLPEAPIRNVAIRNLTI 466
>gi|89098529|ref|ZP_01171412.1| hypothetical protein B14911_09967 [Bacillus sp. NRRL B-14911]
gi|89086774|gb|EAR65892.1| hypothetical protein B14911_09967 [Bacillus sp. NRRL B-14911]
Length = 443
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 182/373 (48%), Gaps = 29/373 (7%)
Query: 63 GGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALL 122
G G KA + A N GG ++++P G++LTG L + L++ A L
Sbjct: 12 GNAGLATEGIQKAIDEAYQN-------GGGKVVIPAGEFLTGPLFLKDNIELHLENGAHL 64
Query: 123 LASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW-- 180
S + ++P++ R ++S +F ++ VTG TI+G G WW
Sbjct: 65 KFSDKQEDYPVVT-----SRWEGVKRKVYASCLFAEGARNIAVTGF-GTIDGNGMEWWDV 118
Query: 181 IKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDS 240
+ R+++ RP LI +++ + ++ LI+SPSW V+P+ ++ + ++I P DS
Sbjct: 119 FRNRREELKYPRPKLISFDHCEHITLRDVRLINSPSWTVNPICCRDITVDNVSILNPADS 178
Query: 241 PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS 300
PNTDGI+P+SC N RI + +I GDDC+A+KSG ++ +V +++ I +
Sbjct: 179 PNTDGIDPESCRNVRISNCHIDVGDDCIAIKSGTEDTEERVA--CENITITNCTMVH-GH 235
Query: 301 AAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFW 360
A+ GSEMSG I++V + +T G+R K+ GRG V+++ V + M+ + F
Sbjct: 236 GAVVFGSEMSGDIRNVTISNCVFQDTDRGIRFKSRRGRGGVVEDVRVDNIVMEGVICPFI 295
Query: 361 MTGDYGSHP----------DPGFDPKALPTVTGINYRDMVADNVTQSAK-LDGIRNDPFT 409
+ Y P +P P +++ ++ A NV SA + G+ T
Sbjct: 296 INLYYFCGPRGKDQYVWDKNPYPVTAETPMFRRLHFANITARNVHASAGYIYGLAEQYAT 355
Query: 410 GICISNVTIKLTE 422
I S + I L +
Sbjct: 356 DITFSQIDISLAK 368
>gi|257070016|ref|YP_003156271.1| endopolygalacturonase [Brachybacterium faecium DSM 4810]
gi|256560834|gb|ACU86681.1| endopolygalacturonase [Brachybacterium faecium DSM 4810]
Length = 431
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 171/352 (48%), Gaps = 24/352 (6%)
Query: 83 LSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGR 142
L + AA GG ++ VP G TG+ L S L++ ALL D + +P + R
Sbjct: 24 LDEAAAAGGGRVSVPAGVHRTGALRLRSGVELHLEAGALLQFVPDPALYPAV-----EAR 78
Query: 143 GRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW--IKYRKKQFNVTRPYLIEVMF 200
G S ++ DV +TG TI+G G+ WW ++R+++ RP LI +
Sbjct: 79 WEGAVGRVHSPCLYAHGERDVAITG-LGTIDGGGQTWWDTFRHRREELAHPRPTLIGLHE 137
Query: 201 SDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNY 260
+ V I ++ L +SP+W VHP +V + L I P +SPNTDGI+P+SC N RI D +
Sbjct: 138 CERVTIRDVALRNSPAWTVHPSLCEDVTLTNLHIHNPAESPNTDGIDPESCRNVRISDCH 197
Query: 261 IVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAED 320
I GDDC+A+K+G + +V T+++ I + + +GSEMSGG+++V +
Sbjct: 198 IDVGDDCIALKAGTERTPDRVA--TENVTITGCTMVR-GHGGVVIGSEMSGGVRNVVISN 254
Query: 321 ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTM-----KYVFWMTGDYGSHPDPGFDP 375
G+R+KT RG V+ + V + M + F+ G G P G D
Sbjct: 255 CVFQGADRGIRLKTRRDRGGTVENVRVSTIVMDDVLCPLTVNPFYFCGPDGKEPHVG-DR 313
Query: 376 KALPTVTG------INYRDMVADNVTQSA-KLDGIRNDPFTGICISNVTIKL 420
A P G ++ + A NV SA + G+ P + + +V+I
Sbjct: 314 TARPVDAGTPHLRSLHLSHLTATNVHASAGHVFGLPEAPLSDFSLHDVSITF 365
>gi|452973315|gb|EME73137.1| glycoside hydrolase [Bacillus sonorensis L12]
Length = 436
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 200/404 (49%), Gaps = 49/404 (12%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+T FG GKT +T AF AI + GG ++ VP G +LTG+ L S+ L++ K
Sbjct: 26 VTRFGADSGGKTDSTAAFQQAIDEAHQ---KGGGRVTVPKGVFLTGALRLKSNVELHVTK 82
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
DA++ SQ+ +++ LP + + G + +S LI+ ++ +TGG ++GQ +
Sbjct: 83 DAVIRFSQNPADY--LPAVLTRFEGVELY--NYSPLIYAYEAENIAITGG-GMLDGQADD 137
Query: 179 --WW--------------------------IKYRKKQF---NVTRPYLIEVMFSDNVQIS 207
WW + +++F + RP I+ NV I
Sbjct: 138 RHWWPWKRGTNGQPSQEKDRDALFEMAERNVPVEERRFGTGHYLRPNFIQPYRCKNVFIQ 197
Query: 208 NLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDC 267
+T+++SP W +HPV NV + G+ + PNTDG++P+SC + I++ +GDDC
Sbjct: 198 GVTVMNSPMWQIHPVLCENVTVDGVKVIG--HGPNTDGVDPESCKSMIIKNCLFDNGDDC 255
Query: 268 VAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAED--ITAIN 325
+A+KSG + G ++ +P+++++I + + +GSE+SGG+K+V AE + + N
Sbjct: 256 IAIKSGRNADGRRINVPSENIVIENN-EMKDGHGGVTIGSEISGGVKNVFAEGNLMDSPN 314
Query: 326 TQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDPGFDPKALPTVTGI 384
+RIKT RG +K IY +K++K V + +Y + G + P V GI
Sbjct: 315 LDRALRIKTNSVRGGVLKNIYFYHNVVKSLKQEVIAIDMEY----EEGDAGEFKPVVRGI 370
Query: 385 NYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQ 428
++ + ++ + P TG+ ++N I P EL+
Sbjct: 371 EVDELKSAGGRYGIRVLAYDHSPVTGLKVTNSEINDVNIPMELK 414
>gi|423223575|ref|ZP_17210044.1| hypothetical protein HMPREF1062_02230 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638200|gb|EIY32047.1| hypothetical protein HMPREF1062_02230 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 532
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 174/352 (49%), Gaps = 46/352 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L ++GG+G+G T NT+AF AI++LS+ GG LIVP G WLTG L S+ L++ K
Sbjct: 52 LAEYGGIGNGMTLNTQAFAAAIADLSER---GGGHLIVPEGIWLTGPIVLKSNIDLHVLK 108
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDE--PGGRFSSLIFGTNLTDVVVTG-----GNA- 170
+A++L + D++++PLL P DE G R S I + ++ +TG GN
Sbjct: 109 NAIVLFTPDKTQYPLLSP--------DEGTSGSRCQSPISAYHESNFSITGEGVFDGNGE 160
Query: 171 -----------------------TINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQIS 207
T+ G W+ + ++ RP ++ + + V +
Sbjct: 161 LWRPVKRFKVSNAEWNSFIKTGGTVKQDGAIWYPETSSEKLAKKRPRMVRFVRCERVLLQ 220
Query: 208 NLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDC 267
+ +SPS++V+ + S N+++ G+ +R P ++ N DGI+ SCTN I + + +GDD
Sbjct: 221 GVVFQNSPSFHVNFILSDNIVVDGIMVRCPWNAQNGDGIDLSSCTNALIVNCAVDAGDDA 280
Query: 268 VAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQ 327
+ +KSG + G + G P ++II + +GS+ GGI V + I+T
Sbjct: 281 ICLKSGIGDVGRRRG-PCANIIIDNCT-VFHGHGGFVIGSDTGGGIDRVSVRNCRFIDTD 338
Query: 328 SGVRIKTAVGRGAYVKEIYVRRMTMKTM-KYVFWMTGDYGSH-PDPGFDPKA 377
+G+R K+ GRG V +YV + M + Y W Y P+P P+
Sbjct: 339 TGLRFKSKRGRGGVVSNVYVDNIMMNDIANYAIWFDSYYQEKTPEPDGIPEG 390
>gi|300772072|ref|ZP_07081942.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300760375|gb|EFK57201.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 570
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 197/441 (44%), Gaps = 79/441 (17%)
Query: 47 FQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSF 106
+ +N + + + FG GDG + NT+A N AI+ S+ GG +++P G W+TG
Sbjct: 50 IKQVNIKADTISIVRFGAQGDGISLNTQAINRAIAETSQ---KGGGVVLIPAGVWVTGPI 106
Query: 107 NLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVT 166
L S+ L+I +DA+LL + D ++ L+ +P R S I G+NL ++ +T
Sbjct: 107 ELKSNINLHIQRDAILLFTDDFDQYKLVE-----ANWEGQPAWRNQSPISGSNLENIAIT 161
Query: 167 GGNATINGQGEPWWIKYRKKQFNVT----------------------------------- 191
G I+G G W +K + +
Sbjct: 162 G-TGIIDGNGGA-WRMVKKSKMTASQWKKLVESGGVLNEEKNIWYPSASSLNGSKTKNPS 219
Query: 192 ------------------RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLT 233
RP L+ + + + +T +SP+WN+HP+ ++ ++ +
Sbjct: 220 AVVPGKTAADYADVKDFFRPNLLVLNNCKQILLEGVTFQNSPAWNLHPLLCQDLTVRNVM 279
Query: 234 IRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRL 293
+R P + N DGI+ +SC N +E++ GDD + +KSG DE G +PT+++IIR
Sbjct: 280 VRNPWYAQNGDGIDIESCKNVLVENSTFDVGDDGICIKSGRDEAGRLRAVPTENVIIRNN 339
Query: 294 ICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMK 353
+ + +GSEMSGG +++ D + I T G+R KT GRG V+ I++ R++M
Sbjct: 340 VVYHAHGGFV-IGSEMSGGARNIWVYDCSFIGTDIGLRFKTTRGRGGIVENIFIDRISMF 398
Query: 354 TMKYVFWMTGDYGSHPDP----GFDPKALPTVT-----------GINYRDMVADNVTQSA 398
+ + Y DP G +A+ VT +D+V + ++
Sbjct: 399 DIPGEAILADMYYEAKDPIPLIGDKQEAVKAVTLPVTEATPQFRNFKIKDVVVNGADKAI 458
Query: 399 KLDGIRNDPFTGICISNVTIK 419
G+ G+ + N++IK
Sbjct: 459 FFRGLPEMNIKGMSLENISIK 479
>gi|347531917|ref|YP_004838680.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
gi|345502065|gb|AEN96748.1| glycoside hydrolase family 28 [Roseburia hominis A2-183]
Length = 518
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 186/404 (46%), Gaps = 39/404 (9%)
Query: 46 EFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGS 105
EF LN RK FG GDG + +T AI A +++++P G + S
Sbjct: 79 EFVTLNVRK-------FGAKGDGVSDDTTFIQAAI-----MACPPESRVLIPAGTYKITS 126
Query: 106 FNLTSHFTLYIHKDALLLASQDESEWPLLPPL-PSYGRGRD--------EPGGRFSSLIF 156
L S ++ + K A LLA D S + +LP L SY D P F+ +I
Sbjct: 127 LFLKSGISVELAKGAELLADTDRSHYAILPGLIESYDETGDYNLGTWEGNPLPMFAGIIS 186
Query: 157 GTNLTDVVVTGGNATINGQG--EPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDS 214
G +++DV + G +ING E WW K K RP ++ + N+++ L DS
Sbjct: 187 GIDVSDVNLYG-EGSINGAASHENWW-KNEKVMVGAFRPRMLSLNRCRNIRVQGLYFHDS 244
Query: 215 PSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGW 274
P+W +HP +S +L L + P SPNTDG++P+SC + I GDDC+AVKSG
Sbjct: 245 PAWVIHPYFSDELLFCNLIVENPAKSPNTDGLDPESCRDVTICGVRFSLGDDCIAVKSGK 304
Query: 275 DEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKT 334
G + P+ ++ + + + + A+ +GSEM+GG+ ++ E +T G+RIKT
Sbjct: 305 IYMGRRYKTPSSNIHVYQCL-MEHGHGAVTVGSEMAGGVNNLIVEKCRFYHTDRGLRIKT 363
Query: 335 AVGRG--AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPD----------PGFDPKALPTVT 382
GRG A + I R + M+ + F Y PD P P++
Sbjct: 364 RRGRGKDAILDNIIFRDLMMEQVMTPFTANAFYFCDPDGRTEFVQSREPYPVDDGTPSMK 423
Query: 383 GINYRDMVADNVTQSAK-LDGIRNDPFTGICISNVTIKLTEKPK 425
+ ++ A + +A DG+ I + NV++ + K
Sbjct: 424 RFCFENITAKDCHVAASYFDGLPEQKIEQITMRNVSVSFAGQAK 467
>gi|371940174|dbj|BAL45524.1| glycoside hydrolase [Bacillus licheniformis]
Length = 436
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 198/404 (49%), Gaps = 49/404 (12%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+T FG G GK T A AI K GG ++ VP G +L+G+ L S+ L++ +
Sbjct: 26 VTAFGADGSGKKDATGAIQKAIDQAHKA---GGGRVAVPEGVFLSGALRLKSNVELHLAQ 82
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG-- 176
A++ SQ+ ++ LP + + G + +S LI+ ++ +TG T++GQG
Sbjct: 83 GAVIKFSQNPEDY--LPVVLTRFEGVELY--NYSPLIYAYEAENIAITG-KGTLDGQGDD 137
Query: 177 EPWW--------------------------IKYRKKQF---NVTRPYLIEVMFSDNVQIS 207
E WW + ++QF + RP I+ ++ I
Sbjct: 138 EHWWPWKRGTNGQSSQEKDRNALFEMAERGVPVTERQFGKGHYLRPNFIQPYRCKDILIQ 197
Query: 208 NLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDC 267
+T+++SP W VHPV NV + G+ + PNTDG+NP+SC N I+ + +GDDC
Sbjct: 198 GVTVLNSPMWQVHPVLCENVTVDGIKVIG--HGPNTDGVNPESCKNVVIKGCHFDNGDDC 255
Query: 268 VAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAED--ITAIN 325
+AVKSG + G ++ MP+++++I + + +GSE+SGG+K+V AE + + N
Sbjct: 256 IAVKSGRNADGRRINMPSENIVIEHN-EMKDGHGGVTIGSEISGGVKNVIAEGNLMDSPN 314
Query: 326 TQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDPGFDPKALPTVTGI 384
+RIKT RG ++ IY + T+K++K V + +Y + G P V I
Sbjct: 315 LDRALRIKTNSVRGGVLENIYFHKNTVKSLKREVIAIDMEY----EEGDAGDFKPVVRNI 370
Query: 385 NYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQ 428
+ + + ++ + P TG+ +++ I + P EL+
Sbjct: 371 DVEQLKSMGGQYGIRVLAYDHSPVTGLKVTDSEIDGVDIPMELK 414
>gi|386819253|ref|ZP_10106469.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424359|gb|EIJ38189.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 468
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 208/427 (48%), Gaps = 63/427 (14%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ D+G V DG+T+N+KA AI + GG ++IVP GK++TG +L S+ ++ +
Sbjct: 53 IKDYGAVNDGETNNSKAIKDAIKACNDA---GGGKVIVPKGKYVTGPIHLLSNVNFHLEE 109
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG-- 176
A +L ++D+ + LP + + G + +S LI+ ++ VT G T NGQ
Sbjct: 110 GAEILFTKDKKAY--LPVVHTSYEGVELM--NYSPLIYAYKQKNIAVT-GKGTFNGQAGK 164
Query: 177 EPWW-----IKY----------------RKKQFNVT---------------RPYLIEVMF 200
+ WW +Y R ++ N RP E
Sbjct: 165 DNWWPWCGAERYGHIEGEPQQKDSVNLPRLRKMNEAGTPVAERVFGEGYQLRPTFFEPFE 224
Query: 201 SDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNY 260
+N+ + ++T ++P W +HP+ S N+ + G+T+R+ PN DG +P+ N I++
Sbjct: 225 CENILVKDVTFTNAPFWVMHPIKSVNITVDGVTVRS--HGPNNDGCDPEYSKNVHIKNCL 282
Query: 261 IVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKD--VR 317
+GDDC+A+KSG ++ G +V +P++++++ C D + +GSE+S G+++ VR
Sbjct: 283 FDTGDDCIAIKSGRNDDGRRVNIPSENIVVEN--CEMKDGHGGVVMGSEISAGVRNVYVR 340
Query: 318 AEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFW-MTGDYGSHPDPGFDPK 376
+ + N +RIKT RG +V+ ++V+ + + +K F + YG + + D
Sbjct: 341 NCKMDSPNLDRAIRIKTNTLRGGFVENVFVKNIEVGQVKEAFLKVNTHYGIYANQEGD-- 398
Query: 377 ALPTVTGINYRDMVADNVTQSAKL-DGIRNDPFTGICISNVTIK------LTEKPKELQW 429
+P++ I+ D+ DN + L G P I NV I L E + +Q+
Sbjct: 399 YMPSIKNIHIEDVKVDNGGKYGILVRGREALPVKNITFKNVVINKAATPMLIEHSEPIQF 458
Query: 430 NCTNIQG 436
T+I G
Sbjct: 459 TNTSING 465
>gi|304317802|ref|YP_003852947.1| glycoside hydrolase family protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779304|gb|ADL69863.1| glycoside hydrolase family 28 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 519
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 166/324 (51%), Gaps = 20/324 (6%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG GDGK +T + AI + DGG ++ P G +LT L S+ TL + K
Sbjct: 86 VRDFGANGDGKRIDTFSIQAAIIS----CPDGG-RVFFPEGIYLTYPLFLKSNITLELGK 140
Query: 119 DALLLASQDESEWPLLPPL-------PSY-GRGRDEPGGRFSSLIFGTNLTDVVVTGGNA 170
A+LL +++ +P+LP SY G E F+SLI G + +V + G
Sbjct: 141 GAVLLGAKEREMYPILPGEIDCKKIEDSYLGSWEGEAKEIFASLITGIGVENVNIIG-EG 199
Query: 171 TINGQG--EPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
TI+G + WW + K+ RP I + NV I +T+ +SPSW +HP+ S N+
Sbjct: 200 TIDGNSSFDTWWHDAKVKRI-AWRPRTIFLNKCKNVLIEGITIKNSPSWTIHPLLSQNLK 258
Query: 229 IQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHL 288
L I P D+PNTDG++P+SC + I GDDC+A+KSG K+ + +++L
Sbjct: 259 FINLNIENPKDAPNTDGLDPESCKDVVILGTRFSVGDDCIAIKSGKLATSRKLPVSSENL 318
Query: 289 IIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGA--YVKEIY 346
IR + + A+ +GSEMSGG+K+V + T G+RIKT GRG+ + EI+
Sbjct: 319 YIRNCL-MEYGHGAVVIGSEMSGGVKNVHVDRCVFRKTDRGIRIKTRRGRGSTGIIDEIH 377
Query: 347 VRRMTMKTMKYVFWMTGDYGSHPD 370
+ M + F + Y D
Sbjct: 378 ASNIKMDKVLTPFTINSFYFCDED 401
>gi|399031152|ref|ZP_10731291.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398070621|gb|EJL61913.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 562
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 185/391 (47%), Gaps = 67/391 (17%)
Query: 19 ILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCR-----KHSAVLTDFGGVGDGKTSNT 73
+L+ L+T + + + + IEF+ + K++ + DFG V G NT
Sbjct: 12 LLAVLITCCSENMAAQKSKSNETYQNIEFKMDKVKEPLIPKNTVNIKDFGAVNGGYVLNT 71
Query: 74 KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPL 133
KAF AI +SK GG ++++PPG WLTG L S+ L+ AL+ S D+S +PL
Sbjct: 72 KAFADAIDAVSK---KGGGKVVIPPGIWLTGPIILKSNLELHAETGALIKFSTDKSLYPL 128
Query: 134 LPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPW------------WI 181
+ + G + R S I+G NL ++ TG +G GE W W
Sbjct: 129 VE---TSFEGLNT--WRCISPIYGKNLENIAFTG-KGVWDGSGEVWRQVKKSKLTESQWK 182
Query: 182 KY------------------------------------RKKQF----NVTRPYLIEVMFS 201
K+ K++F + RP L+ + S
Sbjct: 183 KFVASGGVLNEKKESWYPSETFMKASVGADQNVRLDLKTKEEFEAIHDFLRPVLVSIQNS 242
Query: 202 DNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYI 261
V +SP+WN+HP+ +++++ +T+R P S N DG++ +SC N +E++
Sbjct: 243 KRVMFDGPVFQNSPAWNIHPLMIEDLIVRNVTVRNPWFSQNGDGLDVESCKNVIVENSSF 302
Query: 262 VSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDI 321
GDD + +KSG D+ G G+P +++I++ I + + +GSEMSGG+K++ +
Sbjct: 303 DVGDDAICIKSGKDKDGRDRGIPCENIIVKNNI-VYHGHGGVTVGSEMSGGVKNLHVSNC 361
Query: 322 TAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ + T G+R K+ GRG V+ I++ + M
Sbjct: 362 SFMGTDVGLRFKSNRGRGGVVENIFISDIYM 392
>gi|227536102|ref|ZP_03966151.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
gi|227243999|gb|EEI94014.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
Length = 577
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 126/525 (24%), Positives = 226/525 (43%), Gaps = 84/525 (16%)
Query: 24 LTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNL 83
TL +P A+ P+ S + ++ + + + FG GDG + NT++ N AI+
Sbjct: 38 FTLSSYNPAQAQTAPSLPS----IKQVHVKADTISIVRFGAQGDGISLNTQSINRAIAET 93
Query: 84 SKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRG 143
S+ GG +++P G W+TG L S+ L+I +DA+LL + D ++ L+
Sbjct: 94 SQ---KGGGVVLIPAGVWVTGPIELKSNINLHIQRDAILLFTDDFDQYKLVE-----ANW 145
Query: 144 RDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVT------------ 191
+P R S I G+NL ++ +TG I+G G W +K + +
Sbjct: 146 EGQPAWRNQSPISGSNLENIAITG-TGIIDGNGGA-WRMVKKSKMTASQWKKLIESGGVL 203
Query: 192 -----------------------------------------RPYLIEVMFSDNVQISNLT 210
RP L+ + + + +T
Sbjct: 204 NDEKNIWYPSASSLNGSKTKNPSAVVPGKTAADYADVKDFFRPNLLVLNNCKQILLEGVT 263
Query: 211 LIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAV 270
+SP+WN+HP+ ++ ++ + +R P + N DGI+ +SC N +E++ GDD + +
Sbjct: 264 FQNSPAWNLHPLLCQDLTVRNVMVRNPWYAQNGDGIDIESCKNVLVENSTFDVGDDGICI 323
Query: 271 KSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGV 330
KSG DE G +PT+++IIR + +GSEMSGG +++ D + I T G+
Sbjct: 324 KSGRDEAGRLRAVPTENVIIRNNVVYHA-HGGFVIGSEMSGGARNIWVYDCSFIGTDIGL 382
Query: 331 RIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDP----GFDPKALPTVT---- 382
R KT GRG V+ I++ R++M + + Y DP G +A+ VT
Sbjct: 383 RFKTTRGRGGVVENIFIDRISMFDIPGEAILVDMYYEAKDPIPLIGDKQEAVKAVTLPVT 442
Query: 383 -------GINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQ 435
+D+V + ++ G+ G+ + N++IK + + ++ ++
Sbjct: 443 EATPQFRNFKIKDVVVNGADKAIFFRGLPEMNIKGMSLENISIKSKKGIEIIESTDIELK 502
Query: 436 GITSRVTPQACELLPKKEPTDCFFPDDKLPIDDVRLNTCSASISK 480
+ +TP+ ++ + F P D L S SK
Sbjct: 503 NVKV-ITPETKPVVHIDNSQNIKFSTFSYPADSETLFQISGEKSK 546
>gi|384047530|ref|YP_005495547.1| glycoside hydrolase Family 28 [Bacillus megaterium WSH-002]
gi|345445221|gb|AEN90238.1| Glycoside Hydrolase Family 28 [Bacillus megaterium WSH-002]
Length = 465
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 208/445 (46%), Gaps = 57/445 (12%)
Query: 23 LLTLGLLSPQVAECRPTKNSYTI-----EFQALNCRKHSAVLTDFGGVGDGKTSNTKAFN 77
++TL L+ P A+ S I + Q + + + +G GDGK+ +T AF
Sbjct: 10 VMTLMLVLPFSAQGEALSASEKITAVKEQIQPPSFPNRTFNIKRYGAAGDGKSDSTAAFK 69
Query: 78 TAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPL 137
AI +K GG +++VPPG ++TG+ L S+ L++ K A + SQ+ ++ LP +
Sbjct: 70 KAIEAANKA---GGGRVVVPPGIYVTGAIYLKSNVNLHVMKKATIKFSQNPDKY--LPAV 124
Query: 138 PSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG--EPWWIKYRKKQF------- 188
+ G + +S LI+ N ++ +T G T++GQG E WW KK+F
Sbjct: 125 LTRWEGVELY--NYSPLIYAYNEKNIAIT-GEGTLDGQGDNEHWWPWKGKKEFGWKEGEP 181
Query: 189 ---------------------------NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHP 221
+ RP I+ S N+ I +T+++SP W ++P
Sbjct: 182 NQQQDRDLLFKMAEEKVPVKERVFGKGHYLRPSFIQPYHSKNIMIKGVTILNSPMWQINP 241
Query: 222 VYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKV 281
V S N+LI + I PN DG++P+S N I+D+Y +GDDC+A+KSG + G ++
Sbjct: 242 VLSENILIDDVKIIG--HGPNNDGVDPESSKNVLIKDSYFDNGDDCIAIKSGRNADGRRI 299
Query: 282 GMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAED--ITAINTQSGVRIKTAVGRG 339
+P++++II + + +GSE+SG +++V A+ + + N +RIKT RG
Sbjct: 300 NVPSENIIIEGN-EMKDGHGGVVIGSEISGSVRNVFAQHNVMDSPNLDRALRIKTNSVRG 358
Query: 340 AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAK 399
+++I T+K++ Y D G P V IN ++ ++
Sbjct: 359 GTIEDIDFSNNTVKSVGSEVIQIDMYYEEGDTG---NFTPVVRNINIENLQSNGGKYGLW 415
Query: 400 LDGIRNDPFTGICISNVTIKLTEKP 424
+ P T + I + + P
Sbjct: 416 IRAYERSPVTNLTIRHSNFQHVATP 440
>gi|266621133|ref|ZP_06114068.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288867222|gb|EFC99520.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 517
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 184/392 (46%), Gaps = 32/392 (8%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ +FG GDG +T AI A ++++P G + S L SH L +
Sbjct: 83 VKEFGAKGDGLQDDTGFIQAAI-----LACPKNGRVLIPKGTYRITSLFLKSHIRLELGA 137
Query: 119 DALLLASQDESEWPLLPPL-PSYGRGRD--------EPGGRFSSLIFGTNLTDVVVTGGN 169
A+L A D ++P LP + SY D P F+ +I G + +VV+ G
Sbjct: 138 GAILAADTDRFKYPRLPGMIESYDETEDYNLGTWEGNPLPMFAGIINGIEVENVVIYG-E 196
Query: 170 ATINGQG--EPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNV 227
I+GQ E WW K RP ++ + ++ + L +SP+W +HP +S +
Sbjct: 197 GLIDGQASFENWW-KDAGTMRGAFRPRMVFLERCKDITLQGFYLKNSPAWVLHPYFSQGL 255
Query: 228 LIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQH 287
L I P DSPNTDG++P+SC + I + GDDC+AVKSG G + P+++
Sbjct: 256 RFLDLDIENPADSPNTDGLDPESCKDVEITGLHFSLGDDCIAVKSGKIYMGRRYKTPSEN 315
Query: 288 LIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG--AYVKEI 345
+ IR+ + + A+ +GSE+ G+K VR D +T G+R+KT GRG + + +I
Sbjct: 316 IEIRQCL-MENGHGAVTVGSEVGAGVKAVRVRDCLFRHTDRGLRVKTRRGRGKDSVLSDI 374
Query: 346 YVRRMTMKTMKYVFWMTGDYGSHPDPGFD----PKALPT------VTGINYRDMVADNVT 395
+ + M + F + Y PD + +ALP + +++ D+ A N
Sbjct: 375 SFQHIVMDHVMTPFVVNSFYFCDPDGKTEYVQCREALPADERTPEIQNLSFTDIKAANCH 434
Query: 396 QSAK-LDGIRNDPFTGICISNVTIKLTEKPKE 426
+A L G+ I + NV I E+ +E
Sbjct: 435 AAASFLCGLPEQKIRQIELRNVDISFAEQARE 466
>gi|375150362|ref|YP_005012803.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
gi|361064408|gb|AEW03400.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
Length = 532
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 196/421 (46%), Gaps = 65/421 (15%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
+K + +T FG DG T NT+A N I SK GG +++P G WLTG L S+
Sbjct: 36 KKDTLSITQFGAKSDGLTLNTEAINKTIEACSK---QGGGVVLIPQGIWLTGPIVLKSNV 92
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
LY+ + AL+ + D++++PL+ +Y G+ R + I GT+L +V +TG + I
Sbjct: 93 NLYVSRAALIQFTADKTQYPLIE---TYFEGKKAV--RNQAPISGTDLENVAITG-DGVI 146
Query: 173 NGQGEPW------------WIK--------------------YRKKQF------------ 188
+G G+ W W K Y K +
Sbjct: 147 DGNGDIWRMVKKDKVTEGEWKKLTASGGVVTADGRSWYPSEAYMKAETEKGPKTDYAAIK 206
Query: 189 NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINP 248
+ RP ++ + V + N T +SP WN+H +Y + + G+ +R + N DG++
Sbjct: 207 DYLRPNMVVLRNCRKVLLQNTTFQNSPCWNLHMLYCEQLTLDGVRVRNLPSAQNGDGMDI 266
Query: 249 DSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSE 308
+SC+ ++++ + GDD + +KSG DE G K G +Q++ I + + +GSE
Sbjct: 267 ESCSYVEVKNSTLDCGDDGICIKSGKDEEGRKAGKASQYIYIHDNV-VYKAHGGFVIGSE 325
Query: 309 MSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTM--------KYVFW 360
MSGG D+ + + I T G+R KT GRG V+ IY++ ++M+ + Y F
Sbjct: 326 MSGGAHDIFVTNCSFIGTDVGLRFKTQRGRGGVVENIYIKNISMRDIVNDAISFDMYYFG 385
Query: 361 --MTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
++ G P D + P ++V D +++ + G+ I IS+VTI
Sbjct: 386 KPVSLGAGKIEIPPVD-EGTPQFRKFYISNIVCDGASRAMIIRGLPEMSIKDISISDVTI 444
Query: 419 K 419
K
Sbjct: 445 K 445
>gi|436837106|ref|YP_007322322.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
gi|384068519|emb|CCH01729.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
Length = 777
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 119/430 (27%), Positives = 199/430 (46%), Gaps = 74/430 (17%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
RK + + +G DG T NT+A N AI+ S+ GG +++P G WLTG L S+
Sbjct: 266 RKDTFNIARYGSKADGITLNTQAINQAITRCSQA---GGGTVLIPEGLWLTGPLVLRSNV 322
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
L++ ALL S++ ++P++ + G+D R + I+G +L +V +TG + I
Sbjct: 323 NLHLASGALLQFSRNRDDYPIVA---TTWEGQD--AYRCQAPIWGVDLVNVAITG-SGVI 376
Query: 173 NGQGEPW------------WIKY---------RKKQF----------------------- 188
+G GE W W K +K+ +
Sbjct: 377 DGGGEVWRAVKKSKQTASQWAKLVASGGVLDDKKETWYPSAGSMKGAQSPDLARIANGKT 436
Query: 189 --------NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDS 240
+ RP ++ + V + +T +SP+W +HP+ +V ++G+T++ +
Sbjct: 437 PAELTEIRDFLRPNMVSLTRCQYVLLDGVTFQNSPAWTLHPLLCEHVTMRGVTVKNQWYA 496
Query: 241 PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLIC-ISPD 299
N DG++ +SC N +E+ +GDD + +KSG DE G K G+PT++ IIR C +
Sbjct: 497 QNGDGVDLESCRNGLLENCTFDTGDDGITIKSGRDEEGRKRGVPTENFIIRD--CRVYQA 554
Query: 300 SAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVF 359
+GSEMSGG++++ + + T G+R KTA GRG V+ IYV ++M +
Sbjct: 555 HGGFVIGSEMSGGVRNMYVSNCQFMGTDVGLRFKTARGRGGVVENIYVNNISMTQIAGEA 614
Query: 360 WMTGDYGSHPDP---GFDPKALPTVTGI-------NYRDMVADNVTQSAKLDGIRNDPFT 409
+ Y + DP D LPT+ G +R NV+ GI
Sbjct: 615 ILFDMYYAAKDPVPQAGDKNELPTIEGKPLNEGTPRFRSFFVHNVSCLGAETGILIRGLP 674
Query: 410 GICISNVTIK 419
+ +SN+ I+
Sbjct: 675 EMPVSNILIE 684
>gi|52081815|ref|YP_080606.1| glycoside hydrolase family protein [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|319647732|ref|ZP_08001950.1| hypothetical protein HMPREF1012_02989 [Bacillus sp. BT1B_CT2]
gi|404490699|ref|YP_006714805.1| glycoside hydrolase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423683814|ref|ZP_17658653.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
gi|52005026|gb|AAU24968.1| Glycoside Hydrolase Family 28 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52349704|gb|AAU42338.1| putative glycoside hydrolase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317390073|gb|EFV70882.1| hypothetical protein HMPREF1012_02989 [Bacillus sp. BT1B_CT2]
gi|383440588|gb|EID48363.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
Length = 436
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 201/404 (49%), Gaps = 49/404 (12%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+T FG +GK +T+A AI + GG ++ VP G +L+G+ L S+ L+I K
Sbjct: 26 VTSFGADENGKNDSTEAIQKAIDQAHQA---GGGRVTVPEGVFLSGALRLKSNVDLHIAK 82
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG-- 176
A++ SQ+ ++ LP + + G + +S LI+ ++ +TG T++GQG
Sbjct: 83 GAVIKFSQNPEDY--LPVVLTRFEGVELY--NYSPLIYAYEADNIAITG-KGTLDGQGDD 137
Query: 177 EPWW--------------------------IKYRKKQF---NVTRPYLIEVMFSDNVQIS 207
E WW I ++QF + RP I+ ++ I
Sbjct: 138 EHWWPWKRGTNGQPSQEKDRNALFEMAERGIPVTERQFGKGHYLRPNFIQPYRCKHILIQ 197
Query: 208 NLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDC 267
+T+++SP W VHPV NV + G+ + PNTDG+NP+SC N I+ + +GDDC
Sbjct: 198 GVTVLNSPMWQVHPVLCENVTVDGIKVIG--HGPNTDGVNPESCKNVVIKGCHFDNGDDC 255
Query: 268 VAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAED--ITAIN 325
+AVKSG + G ++ +P+++++I + + +GSE+SGG+K+V AE + + N
Sbjct: 256 IAVKSGRNADGRRINIPSENIVIEHN-EMKDGHGGVTIGSEISGGVKNVIAEGNLMDSPN 314
Query: 326 TQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDPGFDPKALPTVTGI 384
+RIKT RG ++ IY + T+K++K V + +Y + G P V +
Sbjct: 315 LDRALRIKTNSVRGGVLENIYFHKNTVKSLKREVIAIDMEY----EEGDAGDFKPVVRTV 370
Query: 385 NYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQ 428
+ + + + ++ + P TG+ +++ I + P EL+
Sbjct: 371 DVKQLKSMGGQYGIRVLAYDHSPVTGLKVADSEIDGVDVPMELK 414
>gi|418409920|ref|ZP_12983231.1| polygalacturonase-like protein [Agrobacterium tumefaciens 5A]
gi|358003969|gb|EHJ96299.1| polygalacturonase-like protein [Agrobacterium tumefaciens 5A]
Length = 523
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 169/375 (45%), Gaps = 36/375 (9%)
Query: 68 GKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQD 127
G +N +A A++ A G L G W L S T ++ + A+L A
Sbjct: 101 GARANARALEEAVA-----AVPAGGTLRFAAGLWTAFPVRLKSDMTFHLAEGAVLRAPST 155
Query: 128 ESEWPLLPPLPSYGR--GRDE--PGGRFSSLIFGTNLTDVVVTGGNATINGQGE--PWWI 181
+ WP+LP GR G E P F++ + ++V+ G ++G G+ WW
Sbjct: 156 RNGWPILPARDETGRMLGSWEGLPDACFAAPVHAIGADNLVIEG-TGVLDGSGDRGDWWS 214
Query: 182 KYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSP 241
++ + RP + ++ NV + T+ ++PSW VHP + GLTI AP +SP
Sbjct: 215 WPKETRDGARRPRGLHLVSCRNVGLFGFTIRNAPSWTVHPQGCETLKAAGLTISAPHNSP 274
Query: 242 NTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGW-------DEYGIKVGMPTQHLIIRRLI 294
NTDG NP+SC N I GDDC+AVK+G D G+ +H ++ R
Sbjct: 275 NTDGFNPESCRNVTISGVRFSVGDDCIAVKAGKRGPNGEDDHLAETRGVSVRHCLMER-- 332
Query: 295 CISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKT 354
+ +GSEMSGG+ +V ED + T G+R+KT GRG V + +RR+ +
Sbjct: 333 ----GHGGLVIGSEMSGGVHNVTVEDCDMVGTDRGLRLKTRRGRGGSVSNVTMRRVLLDG 388
Query: 355 MKYVFWMTGDYGSHPD------PGFDPKAL----PTVTGINYRDMVADNVTQSAKLD-GI 403
++ Y D DP + P + GI D+ ++ +A + G+
Sbjct: 389 VQTALSANAHYHCDADGHDGWVQSRDPAPVDYGTPFIDGITVEDVEIRHLAHAAGVFLGL 448
Query: 404 RNDPFTGICISNVTI 418
P I I N+TI
Sbjct: 449 PEAPIRNIAIRNLTI 463
>gi|329925656|ref|ZP_08280474.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
gi|328939683|gb|EGG36026.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
Length = 523
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 196/445 (44%), Gaps = 75/445 (16%)
Query: 54 KHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFT 113
+H+ ++D+G VG+G NT+ F+ AI +K GG +++PPG W TG L S
Sbjct: 18 EHTVTISDYGAVGNGVYDNTRVFHQAIEACAKA---GGGTVVIPPGIWRTGPIKLQSRIE 74
Query: 114 LYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATIN 173
L+ AL++ S+ ++PLL + +Y GR R S + G L DV +TG + +
Sbjct: 75 LHASAGALVVFSKFFEDYPLL--MSTY-EGRQMF--RCQSPLDGEGLEDVAITG-SGIFD 128
Query: 174 GQGEP-----------------------------WWIKYRKKQFNVT------------- 191
G GE WW + T
Sbjct: 129 GSGEAWRPVKQGKLTESQWERLIQSGGVVDDQGLWWPTPAARDGQETLDRIEQTGSEEPQ 188
Query: 192 ---------RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPN 242
RP L+ + + +S T +S +W +HP S + IQ +T+R P + N
Sbjct: 189 DYVPVRDYLRPNLLSLRNCKRILLSGPTFQNSAAWCLHPWASEQITIQNITVRNPWYAQN 248
Query: 243 TDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAA 302
DG++ DSC +E++ GDD + +KSG +E G +G P++ + IR +
Sbjct: 249 GDGLDIDSCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERIRIRNC-TVYHGHGG 307
Query: 303 IALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMK-----TMKY 357
I +GSEMSGGIKDV D T I T G+R K+ GRG V+ I + R+ M+ + +
Sbjct: 308 IVVGSEMSGGIKDVYVSDCTFIGTDIGIRFKSCRGRGGVVENILIERIRMRDIDGDAISF 367
Query: 358 VFWMTGDYGS--HPDPGFDP--KALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICI 413
+ G GS + + P + P I +D+V + ++G+ P +
Sbjct: 368 NLYYEGKAGSGEYQEEVMLPVTEETPVFRNIVIQDIVCSGAHTALLINGLPEMP-----V 422
Query: 414 SNVTIKLTEKPKELQWNCTNIQGIT 438
N+T+K + C N Q ++
Sbjct: 423 ENLTVKRSAITSREGIVCRNGQNLS 447
>gi|322437527|ref|YP_004219617.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321165420|gb|ADW71123.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 467
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 184/380 (48%), Gaps = 44/380 (11%)
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDA 120
DFG +GDG T T++ I + GG ++I+P G++LTGS +L + TL + +
Sbjct: 54 DFGAIGDGITLETESLQRTID---RCGVLGGGEVIIPAGRYLTGSVSLRTKVTLRLAAEC 110
Query: 121 LLLASQDESEWPLLPPLPSYGR--GRDEPGGRFSSLIFGTNLTDVVVTG-----GNATIN 173
++L S D + + + S R G+ PG + LI + + V G GN +
Sbjct: 111 VILGSPDLAHYAV-----SQVRWEGKWIPG--YLGLIHALDARKIAVLGPGSIEGNVAVA 163
Query: 174 GQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLT 233
G+ K+ + RP LIE ++ D+V + + + W++HP N++ + LT
Sbjct: 164 GR--------PTKENPLRRPALIEFLYCDDVHLEGFSTSYAHMWSIHPTCCDNLVFRNLT 215
Query: 234 IRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRL 293
+R+ + N DGI+ DSC + I+ I SGDDC+++KSG E ++ PT+ + I
Sbjct: 216 VRSTLT--NGDGIDIDSCRHVLIDTCDIASGDDCISLKSGRGEEAYQLARPTEDVRIVNC 273
Query: 294 ICISPDSAAIALGSEMSGGIKDVRAEDITAINT-QSGVRIKTAVGRGAYVKEIYVRRMTM 352
A I +GSE S GI+ V E + + V IK+ VGRGA+++++ VR M+
Sbjct: 274 TLEGRGFACIGIGSETSAGIRRVLIEGCRVTSVYKFAVYIKSRVGRGAFIEDLTVRDMSA 333
Query: 353 KTMKYVFWM-----TGDYGSHPDPGFDPKALPTVTGINYRDMVADN---------VTQSA 398
M+ F G +P PG D LP I++ + D+ ++
Sbjct: 334 AKMRMGFLKISQTSAGVQDENPVPGLD--GLPLFRNISFLRIHVDDAPVLVEAKEISADK 391
Query: 399 KLDGIRNDPFTGICISNVTI 418
LDG+ D FTG C + +
Sbjct: 392 LLDGLTLDGFTGTCAKGLEL 411
>gi|15893646|ref|NP_346995.1| polygalacturonase [Clostridium acetobutylicum ATCC 824]
gi|337735568|ref|YP_004635015.1| polygalacturonase [Clostridium acetobutylicum DSM 1731]
gi|384457079|ref|YP_005669499.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|15023202|gb|AAK78335.1|AE007550_2 Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
ATCC 824]
gi|325507768|gb|ADZ19404.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|336292627|gb|AEI33761.1| putative polygalacturonase (pectinase) [Clostridium acetobutylicum
DSM 1731]
Length = 513
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 191/404 (47%), Gaps = 36/404 (8%)
Query: 49 ALNCRKHSAVLT--DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSF 106
++ + SAV+ DFG VGDG NT AI + ++I+P G +LTG
Sbjct: 74 SIKTKLESAVVNILDFGAVGDGNHVNTAFIQAAIQVCPAFG-----RVIIPKGTYLTGPL 128
Query: 107 NLTSHFTLYIHKDALLLASQDESEWPLLPPLPSY-------GRGRDEPGGRFSSLIFGTN 159
L S+ TL + + ++LL ++ +P+L S G F+SLI N
Sbjct: 129 FLKSNITLELEEGSVLLGLKEREHYPILKANISMTNRDFYLGSWEGNEADCFASLITAIN 188
Query: 160 LTDVVVTGGNATINGQGE--PWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSW 217
+ +V + G TI+G + WW K ++K+ RP + + N+ + +T+ +SPSW
Sbjct: 189 VENVNIIG-KGTIDGNSDFDTWWFKAKEKRI-AWRPRTLFLNACKNILVEGVTIKNSPSW 246
Query: 218 NVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEY 277
+HP+ S ++ L+I P ++PNTD ++P+SC N I + GDDC+A+KSG +
Sbjct: 247 TIHPLMSDHLKFINLSIENPFNAPNTDALDPESCKNVLILGDTFSVGDDCIAIKSGKIDI 306
Query: 278 GIKVGMPTQHLIIRRLIC-ISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAV 336
K + ++++ IR C + A+ LGSEMS G+K + E T G+RIKT
Sbjct: 307 SKKNPVSSENINIRN--CNMRSGHGAVVLGSEMSSGLKSIFIEKCIFNATDRGLRIKTRR 364
Query: 337 GRGA--YVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPG-----------FDPKALPTVTG 383
GRG+ + I+++ + M + F + Y D D K P +
Sbjct: 365 GRGSKGIIDNIHMKNIKMDKVLTPFSINSFYFCDDDGKTEYVWSKEKLPVDDKT-PYIGS 423
Query: 384 INYRDMVADNV-TQSAKLDGIRNDPFTGICISNVTIKLTEKPKE 426
I D+ N +A + G+ + + NV++ E KE
Sbjct: 424 IYVEDVTCTNAHVCAAFMYGLPEQKIEKVSMKNVSVSFDENAKE 467
>gi|431798423|ref|YP_007225327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789188|gb|AGA79317.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 565
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 167/350 (47%), Gaps = 62/350 (17%)
Query: 55 HSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTL 114
H +T +G VG+G NT AF AI + A GG ++IVP G WLTG L S+ L
Sbjct: 53 HEVNITAYGAVGNGIEKNTAAFAKAIDEV---AQAGGGRVIVPRGIWLTGPVTLQSNINL 109
Query: 115 YIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATING 174
++ + AL+L S+D ++PL+ + G + R +S I ++ +TG I+G
Sbjct: 110 HLEEGALVLFSRDFDDYPLVK---TSFEGLNTV--RCTSPINAFEAENIAITG-KGVIDG 163
Query: 175 QGEPW------------WIKYRKK-------------------------QFNV------- 190
G+ W W K K FNV
Sbjct: 164 NGDAWRPVKKGKMTPGQWDKLVKSGGVLSDDEKMWFPTANSKKGYTSSSNFNVPDLISDD 223
Query: 191 --------TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPN 242
RP ++ ++ + V + T +SP+WN+HP+ S NV+I+ L +R P S N
Sbjct: 224 ELASVKDFLRPVMVSLVKCNKVLLDGPTFQNSPAWNIHPLMSENVVIRNLNVRNPWYSQN 283
Query: 243 TDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAA 302
DG++ +SC N + +N GDD + KSG ++ G GMPT+++I++ +
Sbjct: 284 GDGLDLESCKNALVYNNTFDVGDDAICFKSGKNQDGRDRGMPTENVIVKNN-TVYHAHGG 342
Query: 303 IALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+GSEMSGG+++V + T I T G+R K+ GRG V+ I++ + M
Sbjct: 343 FVVGSEMSGGVRNVHVSNCTFIGTDVGLRFKSTRGRGGVVENIHISDIDM 392
>gi|384566069|ref|ZP_10013173.1| endopolygalacturonase [Saccharomonospora glauca K62]
gi|384521923|gb|EIE99118.1| endopolygalacturonase [Saccharomonospora glauca K62]
Length = 491
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 191/391 (48%), Gaps = 54/391 (13%)
Query: 90 GGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGG 149
GG +++VPPG++ TG+ +L S+ L++ + A L SQD +++ LP + + G +
Sbjct: 92 GGGKVVVPPGEYRTGAIHLRSNIELHVSRGATLRFSQDPADY--LPMVHTRWEGIEL--Y 147
Query: 150 RFSSLIFGTNLTDVVVTGGNATINGQGEP--WW--------------------------- 180
+S ++ + DV +TG ++GQ +P WW
Sbjct: 148 NYSPFVYAYGVHDVAITG-EGVLDGQADPEHWWPWKTEPDGHGGVVETEHRNALHAMAEQ 206
Query: 181 ---IKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAP 237
+ R+ + RP ++ S + +S +TL +SP W +HPV S NVL+ G+T+ +P
Sbjct: 207 GVPVAQRRFADSKLRPNFVQFYRSSTILVSGVTLTNSPMWMIHPVLSENVLVDGVTLDSP 266
Query: 238 IDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIR--RLIC 295
D PN+DG+NP+S N I ++ +GDDC+AVKSG + G ++G+P+++++I R+
Sbjct: 267 -DGPNSDGVNPESSRNVVIRNSRFNNGDDCIAVKSGRNADGRRIGVPSENIVIHDNRMFA 325
Query: 296 ISPDSAAIALGSEMSGGIKDVRAED--ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMK 353
+ +GSEMSG +++V AE + + + +RIKT RG V+ +Y R +
Sbjct: 326 ---GHGGVVIGSEMSGDVRNVFAERNVMNSPHLDRALRIKTNSVRGGTVEGVYFRDNDVP 382
Query: 354 TMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICI 413
+ + D G PTV GI+ ++ + + L G P T I I
Sbjct: 383 AVADAVIRINFHYEEGDVG---DFTPTVRGIHIDNVHSVGGEFALYLRGYERSPITDITI 439
Query: 414 SNVTIK------LTEKPKELQWNCTNIQGIT 438
+ T L E + L ++ I G++
Sbjct: 440 RDSTFSEATTPMLLEHVRGLTFDNVTINGVS 470
>gi|237708712|ref|ZP_04539193.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265756017|ref|ZP_06090484.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345513499|ref|ZP_08793020.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423242356|ref|ZP_17223465.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
gi|229437348|gb|EEO47425.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|229457138|gb|EEO62859.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234095|gb|EEZ19696.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|392639642|gb|EIY33458.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
Length = 539
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 170/384 (44%), Gaps = 68/384 (17%)
Query: 55 HSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTL 114
+S + DFG DG T NTKA N AI ++ A GG ++I+P G WLTG L S+ L
Sbjct: 59 YSVNIIDFGAKPDGITLNTKAINDAIQQVN---AKGGGKVIIPEGLWLTGPIELLSNVNL 115
Query: 115 YIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATING 174
Y K+AL+L S D S +P++ R R S I N ++ +TG + +G
Sbjct: 116 YTEKNALVLFSADHSLYPIINTSFEGLETR-----RCQSPISARNAENIAITG-HGVFDG 169
Query: 175 QGEPW------------WIKY--------------------------RKKQFNV------ 190
G+ W W K K FNV
Sbjct: 170 NGDTWRPTKKDKLTEGQWKKLIASGGVVDADGRIWYPSEGALKGAILSKDNFNVPRGELT 229
Query: 191 ----------TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDS 240
RP L+ + + V + T +SPSW +HP+ N+ I +T+ P S
Sbjct: 230 DSDWDYMRDWLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYS 289
Query: 241 PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS 300
N D ++ +SC I +N +GDD + +KSG DE G K G P Q++I+ +
Sbjct: 290 QNGDALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLH-GH 348
Query: 301 AAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTM---KY 357
+GSEMSGG+ ++ ++ T + T G+R K+ GRG V+ IY+ + M +
Sbjct: 349 GGFVVGSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEAL 408
Query: 358 VFWM-TGDYGSHPDPGFDPKALPT 380
+F + G G DP D K T
Sbjct: 409 IFNLYYGGKGRGEDPNQDEKKAET 432
>gi|239628552|ref|ZP_04671583.1| glycoside hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518698|gb|EEQ58564.1| glycoside hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 695
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 195/409 (47%), Gaps = 58/409 (14%)
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIH-KD 119
D+G V D +T+A AI +S+ GG ++++P G + TG+ L + L + K+
Sbjct: 23 DYGAVADDDKLDTQAIQKAIDEVSE---KGGGKVVIPKGTYDTGAITLKDNVNLCLEDKE 79
Query: 120 ALLLASQD--ESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQ-- 175
L +QD +PL+ Y +P +S+ I+ + ++ +T G T++GQ
Sbjct: 80 TKLQFTQDINHDNYPLV-----YSHWEGQPMYNYSAFIYAKDAVNIALT-GQGTLDGQAG 133
Query: 176 -GEPW-WIKY----------RKKQFNVT-----------------RPYLIEVMFSDNVQI 206
G PW W+ R N+ RP I+V+ +NV +
Sbjct: 134 DGTPWCWMSRDYMTDYQDDDRTALINMNNDRVPVEERIFGEGHFLRPNFIQVIGCENVLV 193
Query: 207 SNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDD 266
+TL+ SP W V+PV +NV ++G+ I + N DGI+P+S IEDNY +GDD
Sbjct: 194 EGVTLLRSPMWEVNPVLCTNVTVRGIHISTK--AANNDGIDPESSNYVLIEDNYFDTGDD 251
Query: 267 CVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAED--ITAI 324
C+A+KSG + G P+Q++IIR I + I +GSE+SGG+ +V A++ +
Sbjct: 252 CIAIKSGRNADGRATNTPSQNIIIRNNI-FADGHGGITIGSEVSGGVNNVFADNNQFNSP 310
Query: 325 NTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVF---WMTGDYGSHPDPGFDPKALPTV 381
N + +R KT RG ++ IY+R T++++ M + G H D +P
Sbjct: 311 NLKYALRFKTNAVRGGIIENIYLRNTTIQSVSDAVVHATMLYEEGRHGD------YMPQF 364
Query: 382 TGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKP-KELQW 429
I ++ + ++ + P TG+ + NV + E P + + W
Sbjct: 365 RNITIENLKSTGGDFGIFVEAFEDVPVTGLVMRNVELNEVENPLRAVNW 413
>gi|150004535|ref|YP_001299279.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|319643966|ref|ZP_07998541.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345518227|ref|ZP_08797681.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|423312455|ref|ZP_17290392.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
gi|149932959|gb|ABR39657.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
gi|254835520|gb|EET15829.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317384490|gb|EFV65457.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392688143|gb|EIY81432.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
Length = 539
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 170/384 (44%), Gaps = 68/384 (17%)
Query: 55 HSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTL 114
+S + DFG DG T NTKA N AI ++ A GG ++I+P G WLTG L S+ L
Sbjct: 59 YSVNIIDFGAKPDGITLNTKAINDAIQQVN---AKGGGKVIIPEGLWLTGPIELLSNVNL 115
Query: 115 YIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATING 174
Y K+AL+L S D S +P++ R R S I N ++ +TG + +G
Sbjct: 116 YTEKNALVLFSADHSLYPIINTSFEGLETR-----RCQSPISARNAENIAITG-HGVFDG 169
Query: 175 QGEPW------------WIKY--------------------------RKKQFNV------ 190
G+ W W K K FNV
Sbjct: 170 NGDTWRPTKKDKLTEGQWKKLVASGGVVDADGRIWYPSEGALKGAILSKDNFNVPRGELT 229
Query: 191 ----------TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDS 240
RP L+ + + V + T +SPSW +HP+ N+ I +T+ P S
Sbjct: 230 DSDWDYMRDWLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYS 289
Query: 241 PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS 300
N D ++ +SC I +N +GDD + +KSG DE G K G P Q++I+ +
Sbjct: 290 QNGDALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLH-GH 348
Query: 301 AAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTM---KY 357
+GSEMSGG+ ++ ++ T + T G+R K+ GRG V+ IY+ + M +
Sbjct: 349 GGFVVGSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEAL 408
Query: 358 VFWM-TGDYGSHPDPGFDPKALPT 380
+F + G G DP D K T
Sbjct: 409 IFNLYYGGKGRGEDPNQDEKKAET 432
>gi|294778294|ref|ZP_06743720.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294447922|gb|EFG16496.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 539
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 170/384 (44%), Gaps = 68/384 (17%)
Query: 55 HSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTL 114
+S + DFG DG T NTKA N AI ++ A GG ++I+P G WLTG L S+ L
Sbjct: 59 YSVNIIDFGAKPDGITLNTKAINDAIQQVN---AKGGGKVIIPEGLWLTGPIELLSNVNL 115
Query: 115 YIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATING 174
Y K+AL+L S D S +P++ R R S I N ++ +TG + +G
Sbjct: 116 YTEKNALVLFSADHSLYPIINTSFEGLETR-----RCQSPISARNAENIAITG-HGVFDG 169
Query: 175 QGEPW------------WIKY--------------------------RKKQFNV------ 190
G+ W W K K FNV
Sbjct: 170 NGDTWRPTKKDKLTEGQWKKLVASGGVVDTDGRIWYPSEGALKGAILSKDNFNVPRGELT 229
Query: 191 ----------TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDS 240
RP L+ + + V + T +SPSW +HP+ N+ I +T+ P S
Sbjct: 230 DSDWDYMRDWLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYS 289
Query: 241 PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS 300
N D ++ +SC I +N +GDD + +KSG DE G K G P Q++I+ +
Sbjct: 290 QNGDALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLH-GH 348
Query: 301 AAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTM---KY 357
+GSEMSGG+ ++ ++ T + T G+R K+ GRG V+ IY+ + M +
Sbjct: 349 GGFVVGSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEAL 408
Query: 358 VFWM-TGDYGSHPDPGFDPKALPT 380
+F + G G DP D K T
Sbjct: 409 IFNLYYGGKGRGEDPNQDEKKAET 432
>gi|325972835|ref|YP_004249026.1| polygalacturonase [Sphaerochaeta globus str. Buddy]
gi|324028073|gb|ADY14832.1| Polygalacturonase [Sphaerochaeta globus str. Buddy]
Length = 453
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 205/462 (44%), Gaps = 66/462 (14%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSH-FTLYIH 117
L FG VG+G+ + ++AF A++ LS DGG L + G +LTG ++ + L +
Sbjct: 6 LKSFGAVGNGQQNESEAFAKALAALS----DGGV-LHIEEGTYLTGPLHIQAKGLVLELD 60
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
+ A++ DE+ + P Y R + N +D ++ G I+G G+
Sbjct: 61 RGAVIQFIADENLYT-----PVYSRWEGVNCYCMHPCLLIEN-SDGLIVRGEGIIDGNGQ 114
Query: 178 PWWIKYRKKQ--------------------------------FNVTRPYLIEVMFSDNVQ 205
WW KK+ RP L++++ S+NV+
Sbjct: 115 WWWDTAHKKRTTQKGPVSAMENELSRLNPGYERQSGGGGGRQSQFLRPPLVQILNSNNVK 174
Query: 206 ISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGD 265
+ LTL +SP W +HP+YS+N++ L + P D+PNTDGI+ DSC I+ + GD
Sbjct: 175 LEGLTLQNSPFWTLHPLYSTNLIFMDLKVLNPKDAPNTDGIDVDSCRFVTIKKCLVDVGD 234
Query: 266 DCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN 325
D +A+KSG G+ PT ++I S A+ +GSE + GI+DVR D
Sbjct: 235 DGIALKSGSGPDGVATNKPTTDILIEECTVKSAHGGAV-IGSETAAGIRDVRVHDCLFDG 293
Query: 326 TQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDY--GSHPDPGFDPKAL----- 378
T G+RIKT GRG + ++ + MK + Y GS F + L
Sbjct: 294 TDRGIRIKTRRGRGGAISNLHFSSVRMKNNLCPLTLNMYYRCGSLDPQDFSLEKLSITDT 353
Query: 379 -PTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQG 436
P++ G+ D +++ T SA + G+ P + I N T + + G
Sbjct: 354 TPSIEGVTIEDCYSEDFTSSAAFIVGLPESPIRDLVIRNCTFTVAKT------------G 401
Query: 437 ITSRVTPQACELLPKKEPTDCFFPDDKLPIDDVRLNTCSASI 478
+T + E LP+ + + +L I DV++ +++
Sbjct: 402 LTPVDESEMYEGLPEPQGRGIRLRNVQLSIQDVQVEGVESAL 443
>gi|219814394|gb|ACL36472.1| pectinase [uncultured bacterium]
Length = 436
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 196/404 (48%), Gaps = 49/404 (12%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+T FG G GK T A AI K GG ++ VP G +L+G+ L S+ L++ +
Sbjct: 26 VTAFGADGSGKKDATGAIQKAIDQAHKA---GGGRVAVPEGVFLSGALRLKSNVELHLAQ 82
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG-- 176
A++ SQ+ ++ LP + + G + +S LI+ ++ +TG T++GQG
Sbjct: 83 GAVIKFSQNPEDY--LPVVLTRFEGVELY--NYSPLIYAYEAENIAITG-KGTLDGQGDD 137
Query: 177 EPWW--------------------------IKYRKKQF---NVTRPYLIEVMFSDNVQIS 207
E WW + ++QF + RP I+ ++ I
Sbjct: 138 EHWWPWKRGTNGQSSQEKDRNALFEMAERGVPVTERQFGKGHYLRPNFIQPYRCKDILIQ 197
Query: 208 NLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDC 267
+ +++SP W VHPV NV + G+ + PNTDG+NP+SC N I+ + SGDDC
Sbjct: 198 GVPVLNSPMWQVHPVLCENVTVDGIKVIG--HGPNTDGVNPESCKNVVIKGCHFDSGDDC 255
Query: 268 VAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAED--ITAIN 325
+AVKSG + ++ MP+++++I + + +GSE+SGG+K+V AE + + N
Sbjct: 256 IAVKSGRNADARRINMPSENIVIEHN-EMKDGHGGVTIGSEISGGVKNVIAEGNLMDSPN 314
Query: 326 TQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDPGFDPKALPTVTGI 384
+RIKT RG ++ IY + T+K++K V + +Y + G P V I
Sbjct: 315 LDRALRIKTNSVRGGVLENIYFHKNTVKSLKREVIAIDMEY----EEGDAGDFKPVVRNI 370
Query: 385 NYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQ 428
+ + + ++ + P TG+ +++ I + P EL+
Sbjct: 371 DVEQLKSMGGQYGIRVLAYDHSPVTGLKVTDSEIDGVDIPMELK 414
>gi|218134189|ref|ZP_03462993.1| hypothetical protein BACPEC_02079 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991564|gb|EEC57570.1| polygalacturonase (pectinase) [[Bacteroides] pectinophilus ATCC
43243]
Length = 480
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 194/449 (43%), Gaps = 74/449 (16%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R+ + D+G V G+ SNT+A N AI S+ +GG +IVP G WLTG + +
Sbjct: 19 REAQYDIRDYGAVAGGRVSNTEAINAAIRTCSE---EGGGHVIVPSGLWLTGPVRILTGV 75
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
L++ A+L+ ++ E+PL+ + Y +P R S I + +V +TG TI
Sbjct: 76 DLHVENGAVLMFDKNREEYPLI--ISDY---EGQPRIRTVSPIMAADAQNVAITG-EGTI 129
Query: 173 NGQGEPW------------WIKY------------------------------------- 183
+G GE W W K+
Sbjct: 130 DGNGELWRPLKKFKVTQRQWDKFVATSPDTVIPTNEGGMWFPTVTSYDGCMEGEPSLDDP 189
Query: 184 -----RKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
++ ++ RP ++ + D V I +TL +SP+WNVHP+ +N+ + I+ P
Sbjct: 190 DALKKAERHYDFYRPVMVNFVRCDRVLIDGVTLQNSPAWNVHPLLCTNLTVSNAFIKNPY 249
Query: 239 DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISP 298
+ N DGI+ +SC I + GDD + +KSG +E G ++ PT+++ I +
Sbjct: 250 YAQNGDGIDVESCQYVEIYNTKFEVGDDGICLKSGKNEIGRRIKTPTKYVYIHDCTVMHA 309
Query: 299 DSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMK----- 353
+GSEMS G+ +V ++ + T G+R K+ +GRG V+ I + + M
Sbjct: 310 -HGGFVVGSEMSRGMSEVYVQNCAFMGTDVGIRFKSQLGRGGIVENINLENINMTGIVGE 368
Query: 354 ----TMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFT 409
TM Y + D + +P +N +++ + K +GI
Sbjct: 369 AIIFTMGYSLYKLEHEKKDEDVFVSTEDIPVFRNVNMKNITCVGAKTAFKAEGIAFPEGK 428
Query: 410 GI-CISNVTIKLTEKPKELQWNCTNIQGI 437
G+ + +T++ +E + +N Q I
Sbjct: 429 GMPTVYGITLEDSEITADSGLTISNAQDI 457
>gi|433656005|ref|YP_007299713.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433294194|gb|AGB20016.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 519
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 165/324 (50%), Gaps = 20/324 (6%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG GDGK +T + AI + DGG ++ G +LT L S+ TL + K
Sbjct: 86 VRDFGANGDGKRIDTFSIQAAIIS----CPDGG-RVFFHEGIYLTYPLFLKSNITLELGK 140
Query: 119 DALLLASQDESEWPLLPPL-------PSY-GRGRDEPGGRFSSLIFGTNLTDVVVTGGNA 170
A+LL +++ +P+LP SY G E F+SLI G + +V + G
Sbjct: 141 GAVLLGAKEREMYPILPGEIDCKKIEDSYLGSWEGEAKEIFASLITGIGVENVNIIG-EG 199
Query: 171 TINGQG--EPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
TI+G + WW + K+ RP I + NV I +T+ +SPSW +HP+ S N+
Sbjct: 200 TIDGNSSFDTWWHDAKVKRI-AWRPRTIFLNKCKNVLIEGITIKNSPSWTIHPLLSQNLK 258
Query: 229 IQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHL 288
L I P D+PNTDG++P+SC + I GDDC+A+KSG K+ + +++L
Sbjct: 259 FINLNIENPKDAPNTDGLDPESCKDVVILGTRFSVGDDCIAIKSGKLATSRKLPVSSENL 318
Query: 289 IIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGA--YVKEIY 346
IR + + A+ +GSEMSGG+K+V + T G+RIKT GRG+ + EI+
Sbjct: 319 YIRNCL-MEYGHGAVVIGSEMSGGVKNVHVDRCVFRKTDRGIRIKTRRGRGSTGIIDEIH 377
Query: 347 VRRMTMKTMKYVFWMTGDYGSHPD 370
+ M + F + Y D
Sbjct: 378 ASNIKMDKVLTPFTINSFYFCDAD 401
>gi|427384333|ref|ZP_18880838.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
gi|425727594|gb|EKU90453.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
Length = 506
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 191/427 (44%), Gaps = 77/427 (18%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L DFG VG+G+ T+AF AI L A GG LIVP G W TG L S+ L++ K
Sbjct: 52 LADFGAVGNGEELCTEAFAKAIDAL---AEKGGGHLIVPAGVWFTGPIVLKSNIDLHLEK 108
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A++L S + +PL+ + G D R S + G NL +V +TG A I+G G
Sbjct: 109 GAIILFSPNVDLYPLVE---TVFEGLDTR--RCQSPVSGRNLENVAITGEGA-IDGNGHY 162
Query: 179 W----------------------------WIKY-------------------RKKQFNVT 191
W W Y ++++
Sbjct: 163 WRPLKREKVTESVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLKSEEEWQSV 222
Query: 192 RPYLIEVMFS----DNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGIN 247
R +L VM S NV + + +SP+WN+HP+ NVLI+ + +R P + N DG++
Sbjct: 223 RHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNGDGLD 282
Query: 248 PDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGS 307
+SC NT I ++ GDD + +KSG DE G G +++++ + +GS
Sbjct: 283 LESCKNTLIVNSTFDVGDDGICLKSGKDEDGRIRGRVCENVVVDGCT-VFKGHGGFVVGS 341
Query: 308 EMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM-----KTMKYVFWMT 362
EMSGG+++V + + T G+R K+ GRG V+ I++R ++M + + + +
Sbjct: 342 EMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNISMIDIPTEPITFNLYYG 401
Query: 363 G-------DYGSHPDPGFDP----KALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGI 411
G + G +P + P I+ ++V ++ +GI P GI
Sbjct: 402 GKSAVEVLESGEVVPAKVEPMPVDETTPCFRNIHVENLVCAGARRALFFNGIPEMPIDGI 461
Query: 412 CISNVTI 418
+ NV I
Sbjct: 462 TLKNVDI 468
>gi|261879637|ref|ZP_06006064.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270333653|gb|EFA44439.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 496
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 127/482 (26%), Positives = 205/482 (42%), Gaps = 96/482 (19%)
Query: 18 KILSTLLTLGLLSPQVAECRPTKNSYT-------IEFQALNCRK---HSAVLTDFGGVGD 67
K+L L+ Q C +N Y E Q L L DFG VGD
Sbjct: 4 KLLCITFVSLALTAQAQNCCSQENRYQKYTQNLPFEMQELKAPAIPDRQVNLKDFGAVGD 63
Query: 68 GKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQD 127
G T T+AF AI LS+ GG +LIVP G W TG L S+ L++ A++ S D
Sbjct: 64 GTTLCTEAFAKAIDKLSE---QGGGKLIVPGGVWFTGPIVLKSNINLHLEVGAVIQFSGD 120
Query: 128 ESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPW-------- 179
ES +P++ R R S + ++ +TG I+G G+ W
Sbjct: 121 ESLYPVIKTSFEGLETR-----RCQSPLSANGAKNIAITG-QGVIDGNGQFWRPVKRGKV 174
Query: 180 ---------------------WI-------KYRKKQFNV---------------TRPYLI 196
W+ + NV RP ++
Sbjct: 175 TDGQWKEILARPGGVEAKKGYWVPNQAYADAEKNADMNVPRAETDEEWNAIKRFLRPVMV 234
Query: 197 EVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRI 256
++ NV + ++ +SP+WN+HP+ NV+I G+ R P + N D ++ +SC N +
Sbjct: 235 SLVNCKNVLLKDVIFQNSPAWNIHPLMCENVIIDGVLARNPSYAQNGDALDLESCKNVLV 294
Query: 257 EDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDV 316
++ +GDD + +KSG DE G K G P +++++ + +GSEMSGG++++
Sbjct: 295 VNSKFDAGDDGICIKSGKDESGRKRGRPCENVVVDGCTVFA-GHGGFVVGSEMSGGVRNI 353
Query: 317 RAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTM-------------KYVFWMTG 363
+ + T G+R K+ GRG V+ I++ ++M + K V M
Sbjct: 354 LVKRCQFLGTDVGLRFKSKRGRGGIVENIFIHDISMTDIKTDAITFNMYYGGKSVAEMLA 413
Query: 364 DYGSHPDPGFDPKALPTVTG-------INYRDMVADNVTQSAKLDGIRNDPFTGICISNV 416
D G +PD + +P VTG I+ R++V ++ + +G+ P I + NV
Sbjct: 414 D-GDNPD---NVSKMP-VTGETPIFRHIDIRNIVCYGAGRAMEFNGLPEMPIENINLENV 468
Query: 417 TI 418
I
Sbjct: 469 HI 470
>gi|212693553|ref|ZP_03301681.1| hypothetical protein BACDOR_03070 [Bacteroides dorei DSM 17855]
gi|212663806|gb|EEB24380.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 539
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 170/384 (44%), Gaps = 68/384 (17%)
Query: 55 HSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTL 114
+S + DFG DG T NTKA N AI ++ A GG ++I+P G WLTG L S+ L
Sbjct: 59 YSVNIIDFGAKPDGITLNTKAINDAIQQVN---AKGGGKVIIPEGLWLTGPIELLSNVNL 115
Query: 115 YIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATING 174
Y K++L+L S D S +P++ R R S I N ++ +TG + +G
Sbjct: 116 YTEKNSLVLFSADHSLYPIINTSFEGLETR-----RCQSPISARNAENIAITG-HGVFDG 169
Query: 175 QGEPW------------WIKY--------------------------RKKQFNV------ 190
G+ W W K K FNV
Sbjct: 170 NGDTWRPTKKDKLTEGQWKKLIASGGVVDADGRIWYPSEGALKGAILSKDNFNVPRGELT 229
Query: 191 ----------TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDS 240
RP L+ + + V + T +SPSW +HP+ N+ I +T+ P S
Sbjct: 230 DSDWDYMRDWLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYS 289
Query: 241 PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS 300
N D ++ +SC I +N +GDD + +KSG DE G K G P Q++I+ +
Sbjct: 290 QNGDALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLH-GH 348
Query: 301 AAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTM---KY 357
+GSEMSGG+ ++ ++ T + T G+R K+ GRG V+ IY+ + M +
Sbjct: 349 GGFVVGSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEAL 408
Query: 358 VFWM-TGDYGSHPDPGFDPKALPT 380
+F + G G DP D K T
Sbjct: 409 IFNLYYGGKGRGEDPNQDEKKAET 432
>gi|189461873|ref|ZP_03010658.1| hypothetical protein BACCOP_02539 [Bacteroides coprocola DSM 17136]
gi|189431467|gb|EDV00452.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 494
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 194/444 (43%), Gaps = 79/444 (17%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L DFG VGDG T+AF AI L K GG +L VP G W TG L S+ L+I K
Sbjct: 52 LKDFGAVGDGMHLCTEAFAKAIDALDK---KGGGKLTVPAGVWFTGPIVLKSNINLHIEK 108
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A++L S D +PL+ + G D R S I G NL +V +TG A I+G G
Sbjct: 109 GAIVLFSPDVDLYPLVE---TVFEGLDTR--RCQSPISGRNLVNVAITGQGA-IDGNGHY 162
Query: 179 W----------------------------WIKY-------------------RKKQFNVT 191
W W Y ++++
Sbjct: 163 WRPLKKQKVTEGQWKAATSRGGVYKRPDYWFPYPETLKGDTISNMNVPQNLKTEEEWQSV 222
Query: 192 RPYLIEVMFS----DNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGIN 247
R +L VM S NV + + +SP+WN+HP+ NVLI+ + +R P + N DG++
Sbjct: 223 RHFLRPVMVSFIECKNVWLEGVVFQNSPAWNLHPLMCENVLIENVEVRNPSYAQNGDGLD 282
Query: 248 PDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGS 307
+SC N I ++ GDD + +KSG DE G + +++I+ + +GS
Sbjct: 283 LESCKNALIVNSSFDVGDDGICLKSGKDEDGRRRARACENVIVDGCT-VYKGHGGFVVGS 341
Query: 308 EMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM-----KTMKYVFWMT 362
EMSGG++++ + + T G+R K+ GRG V+ I++R ++M + + + +
Sbjct: 342 EMSGGVRNISVNNCQFLGTDVGLRFKSKRGRGGVVENIWIRNISMIDIPTEPVTFNLYYG 401
Query: 363 G-------DYGSHPDPGFDP----KALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGI 411
G + G P + P I+ + N ++ +GI P GI
Sbjct: 402 GKSAVEVLESGEVVPVKVAPMPVDETTPCFRNIHIEHLTCSNARRAMYFNGIPEMPIDGI 461
Query: 412 CISNVTIKLTEKPKELQWNCTNIQ 435
+ + I+++ K + C NI
Sbjct: 462 TLKH--IRISAKNDAEFYYCKNIH 483
>gi|386819250|ref|ZP_10106466.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424356|gb|EIJ38186.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 569
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 198/438 (45%), Gaps = 79/438 (18%)
Query: 54 KHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFT 113
K + + +G V G NT+A AIS +SK GG + +P G WLTG L S+
Sbjct: 56 KLTVSIEKYGAVAGGLEKNTQAIEKAISEVSK---KGGGTVKIPRGIWLTGPITLKSNIN 112
Query: 114 LYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATIN 173
L++ ALLL S++ ++PL + G + R S I N+ ++ +TG I+
Sbjct: 113 LHLEDGALLLFSKNFEDYPLTD---TSFEGLNTM--RCISPINAMNVENIAITG-KGVID 166
Query: 174 GQGEPW-----------------------------WI--KYRKKQF---------NVT-- 191
G G+ W W K KK F N+T
Sbjct: 167 GNGDAWRPVKKGKMTSKQWDNLVASGGVLSEDGKIWFPTKSSKKGFDSREYFNVPNLTKK 226
Query: 192 ----------RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSP 241
RP ++ ++ + V + T +SP+WN+HP+ S NV+I+ L +R P S
Sbjct: 227 EDLESVKDFLRPVMVSIVNCNKVLLDGPTFQNSPAWNIHPLMSENVIIRNLKVRNPWYSQ 286
Query: 242 NTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSA 301
N DG++ +SC N I +N GDD + +KSG D+ G G+PT+++I++ +
Sbjct: 287 NGDGLDLESCKNVLIYNNTFDVGDDAICIKSGKDKDGRDRGIPTENVIVKNN-TVYHAHG 345
Query: 302 AIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM-----KTMK 356
+GSEMSGG+K++ + I T G+R K+ GRG V+ IY+ + M + ++
Sbjct: 346 GFVIGSEMSGGVKNINVSNCNFIGTDVGLRFKSTRGRGGVVENIYISDINMINIPTEAIR 405
Query: 357 YVFWMTG------DYGSHPDPGFDPKAL------PTVTGINYRDMVADNVTQSAKLDGIR 404
+ + +G + + D D + + P I ++++A N ++A G+
Sbjct: 406 FNMFYSGNAPILEENQNAEDEQRDEQKVAVTEETPVFKNIYMKNIIATNSGKAAFFMGLP 465
Query: 405 NDPFTGICISNVTIKLTE 422
+ + N ++ E
Sbjct: 466 EKSLENVTLENAMLEADE 483
>gi|423223780|ref|ZP_17210249.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638155|gb|EIY32008.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 507
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 190/427 (44%), Gaps = 77/427 (18%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L DFG VG+G+ T AF AI L A GG LIVP G W TG L S+ L++ K
Sbjct: 52 LADFGAVGNGEELCTAAFAKAIDAL---AEKGGGHLIVPAGVWFTGPIVLKSNIDLHLEK 108
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A++L S D +PL+ + G D R S + G NL +V +TG A I+G G
Sbjct: 109 GAVILFSPDVDLYPLVE---TVFEGLDTR--RCQSPVSGRNLENVAITGEGA-IDGNGHY 162
Query: 179 W----------------------------WIKY-------------------RKKQFNVT 191
W W Y ++++
Sbjct: 163 WRPLKREKVTEGVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLKTEEEWQSV 222
Query: 192 RPYLIEVMFS----DNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGIN 247
R +L VM S NV + + +SP+WN+HP+ NVLI+ + +R P + N DG++
Sbjct: 223 RHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNGDGLD 282
Query: 248 PDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGS 307
+SC N I ++ GDD + +KSG DE G + G +++++ + +GS
Sbjct: 283 LESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRGRVCENVVVDGCT-VFKGHGGFVVGS 341
Query: 308 EMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM-----KTMKYVFWMT 362
EMSGG+++V + + T G+R K+ GRG V+ I++R + M + + + +
Sbjct: 342 EMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNIAMMDIPTEPITFNLYYG 401
Query: 363 G-------DYGSHPDPGFDP----KALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGI 411
G + G +P + P I+ +++V ++ +GI P GI
Sbjct: 402 GKSAVEVLESGEKVLAKVEPLPVDETTPCFRNIHVKNLVCAGARRALFFNGIPEMPIDGI 461
Query: 412 CISNVTI 418
+ ++ I
Sbjct: 462 VLEDIDI 468
>gi|160936546|ref|ZP_02083913.1| hypothetical protein CLOBOL_01436 [Clostridium bolteae ATCC
BAA-613]
gi|158440337|gb|EDP18082.1| hypothetical protein CLOBOL_01436 [Clostridium bolteae ATCC
BAA-613]
Length = 522
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 193/418 (46%), Gaps = 45/418 (10%)
Query: 40 KNSYTI--EFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVP 97
K+S+T EF L+ R DFG GDG +T AI A +++++P
Sbjct: 70 KSSFTTDSEFVTLDVR-------DFGAKGDGIQDDTLFIQAAI-----MACPEKSRVLIP 117
Query: 98 PGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPL-PSY--------GRGRDEPG 148
G + S L + + + A+L A D + +P+ + SY G P
Sbjct: 118 AGTYRIVSLFLKDDVNIELAEGAVLSAYTDRTRFPVFQGMIQSYDEQGEYNLGTWEGNPL 177
Query: 149 GRFSSLIFGTNLTDVVVTG-----GNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDN 203
F+ +I G N+ V+ G GNA G E W K RP +I +
Sbjct: 178 PMFTGIINGVNVKGAVIYGQGTIDGNA---GDSEGNWWHEPKVIHTACRPRMIFLERCRQ 234
Query: 204 VQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVS 263
V + +T+ +SPSWN+HP +S ++ L + P DSPNTDG++P+SC + I Y
Sbjct: 235 VTVQGITVRNSPSWNIHPYFSDHLRFFDLKVLNPKDSPNTDGLDPESCQDVEIAGVYFSL 294
Query: 264 GDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITA 323
GDDC+AVKSG G P++ + IRR C+ ++ +GSEM+GG+K++ +D
Sbjct: 295 GDDCIAVKSGKIYMGSTYKRPSKDISIRRC-CMRDGHGSVTIGSEMAGGVKNLTVKDCMF 353
Query: 324 INTQSGVRIKTAVGRG--AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFD----PKA 377
++T G+RIKT GRG A V I + M + F + Y PD + +A
Sbjct: 354 LHTDRGLRIKTRRGRGKDAVVDGIVFEHIRMDHVMTPFVINCFYFCDPDGHSEYVRTKEA 413
Query: 378 L------PTVTGINYRDMVADNV-TQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQ 428
L P + + ++D+ A+N +A + G+ + + +V + +E Q
Sbjct: 414 LLVDERTPLIKSLCFKDIEAENCHVAAAYMYGLPEQRIERVEMDHVRVTYAASAREGQ 471
>gi|333382495|ref|ZP_08474165.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828806|gb|EGK01498.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
Length = 545
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 123/476 (25%), Positives = 206/476 (43%), Gaps = 83/476 (17%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+TDFGG+ DG T NT AF A+ LS GG L VP G W TG S+ L++ K
Sbjct: 53 ITDFGGIPDGITLNTDAFAKAMDALSN---KGGGTLFVPSGVWYTGPIVFKSNINLHLEK 109
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
AL+L S D + +PL+ + G D R S I G NL ++ +TG +ING GE
Sbjct: 110 GALILFSADFNLYPLVN---TVFEGLDTR--RCQSPISGRNLENIAITG-EGSINGSGEA 163
Query: 179 WWIKYRKKQF-------------------------------------------------- 188
W +K +
Sbjct: 164 -WRPLKKSKVTEIHWKKVINSGGVVKDGNYWFPSKGSLKGLEISDMNVPRHDLTEAEWME 222
Query: 189 --NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGI 246
+ RP ++ + NV + + +SPSWN+HP+ NV++ + +R P + N DG+
Sbjct: 223 IKDFLRPVMVSFIECKNVLLEGVLFENSPSWNIHPLMCENVILDNVMVRNPGYAQNGDGL 282
Query: 247 NPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLIC-ISPDSAAIAL 305
+ +SC N+ I ++ GDD + +KSG DE G + PT++++I C + +
Sbjct: 283 DLESCKNSIIVNSIFDVGDDAICIKSGKDEDGRRRNRPTENVLIDN--CKVFQGHGGFVV 340
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM---KTMKYVFWMT 362
GSEMSG ++++ + + T G+R K+ GRG V+ IY+R + M T ++F +
Sbjct: 341 GSEMSGSVRNILVSNCQFLGTDVGLRFKSCRGRGGVVENIYIRDINMFDIATESFLFDLY 400
Query: 363 GDYGSHPDPGFDPKALPTVT-------------GINYRDMVADNVTQSAKLDGIRNDPFT 409
S + D +P + I +++V+ N ++ +G+
Sbjct: 401 YGGKSAVESLEDGDTIPVTSTILAVDETTPAFKNIYVKNLVSRNARRAMFFNGLPEMKIE 460
Query: 410 GICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTDCFFPDDKLP 465
I + +VTI + ++ + + + R+ P+ L K D + + P
Sbjct: 461 NINVEDVTITSIIGAELVESKGIHFKNV--RINPKEGAALILKNVEDVYISGFEYP 514
>gi|225420387|ref|ZP_03762690.1| hypothetical protein CLOSTASPAR_06732 [Clostridium asparagiforme
DSM 15981]
gi|225040964|gb|EEG51210.1| hypothetical protein CLOSTASPAR_06732 [Clostridium asparagiforme
DSM 15981]
Length = 519
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 173/364 (47%), Gaps = 33/364 (9%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG GDG +T A +AI A ++++P G++ L L + K
Sbjct: 84 VRDFGAAGDGIKDDTLAIQSAI-----MACPPQGRVLIPAGRYSFVCLFLKDGINLELEK 138
Query: 119 DALLLASQDESEWPLLPPLPSY---------GRGRDEPGGRFSSLIFGTNLTDVVVTGGN 169
A L A D +P P + Y G +P F LI G ++ +V + G
Sbjct: 139 GAELSAVTDRERFPFYPGMVPYTDQTGDYCLGTWEGDPQKMFCGLITGVHVKNVNIYG-E 197
Query: 170 ATINGQG--EPWWIKYRKKQFNVT-RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSN 226
T+NG E WW + K+ + RP + + +N+ + LT+ +SPSW +HP +S++
Sbjct: 198 GTLNGNASHENWW--HNCKEMKIAWRPRAVFLNGCENISLVGLTVKNSPSWTIHPYFSNH 255
Query: 227 VLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQ 286
+ GL + AP DS NTDG++P+SC + + GDDC+AVKSG G P++
Sbjct: 256 LRFLGLNVLAPKDSHNTDGLDPESCRQVELAGIHFSVGDDCIAVKSGKIYMGKTYRTPSE 315
Query: 287 HLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG--AYVKE 344
H+ IR+ ++ ++ +GSE+ G++D+ D +T G+RIKT GRG V
Sbjct: 316 HITIRQC-SMNDGHGSVVIGSEIGAGVRDLTVRDCIFKDTDRGLRIKTRRGRGEDCVVDR 374
Query: 345 IYVRRMTMKTMKYVFWMTGDYGSHPD----------PGFDPKALPTVTGINYRDMVADNV 394
+ + M + F + Y PD P + P++ ++++D+ A+N
Sbjct: 375 VAFENIRMDGVLTPFVVNCFYFCDPDGRTEYVQSKEPLPVDERTPSIQELSFKDIHAENA 434
Query: 395 TQSA 398
+A
Sbjct: 435 HYAA 438
>gi|329964701|ref|ZP_08301755.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328525101|gb|EGF52153.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 506
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 192/427 (44%), Gaps = 77/427 (18%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L DFG VG+GK T+AF +AI+ LS GG LIVP G W TG L S+ L++ K
Sbjct: 52 LKDFGAVGNGKDLCTEAFASAINTLS---GQGGGHLIVPAGVWFTGPIVLKSNIDLHLEK 108
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A++L S D +PL + + G D R S I G NL +V +TG A I+G G
Sbjct: 109 GAVILFSPDVDLYPL---VETVFEGLDTR--RCQSPISGRNLENVAITGEGA-IDGNGHF 162
Query: 179 W----------------------------WIKY-------------------RKKQFNVT 191
W W Y ++++
Sbjct: 163 WRPLKREKVTESVWKQTVSRGGVYKRPTYWFPYPETLKGDTISNMNVPRHLITEEEWQSV 222
Query: 192 RPYLIEVMFS----DNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGIN 247
R +L VM S NV + + +SP+WN+HP+ NVL++ + +R P + N DG++
Sbjct: 223 RHFLRPVMVSLIECRNVWLQGVIFQNSPAWNLHPLMCENVLVEEVQVRNPSYAQNGDGLD 282
Query: 248 PDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGS 307
+SC N I ++ GDD + +KSG DE G + +++++ + +GS
Sbjct: 283 LESCRNALIVNSTFDVGDDGICLKSGKDEDGRRRARVCENVVVDGCT-VFKGHGGFVVGS 341
Query: 308 EMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM-----KTMKYVFWMT 362
EMSGG+++V + + T G+R K+ GRG V+ I+V ++M + + + +
Sbjct: 342 EMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWVTNVSMMDIPTEPITFNLYYG 401
Query: 363 G-------DYGSHPDPGFDP----KALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGI 411
G + G +P + P I+ R++V ++ +GI P GI
Sbjct: 402 GKSAVEVLESGETVPAKVEPLPVDETTPCFRNIHVRNLVCAGARRALFFNGIPEMPIDGI 461
Query: 412 CISNVTI 418
+ ++ I
Sbjct: 462 VLEDIDI 468
>gi|284039631|ref|YP_003389561.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283818924|gb|ADB40762.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 551
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 194/435 (44%), Gaps = 71/435 (16%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R+ + + FG DG + NT+A N AIS S+ GG ++VP G WLTG L S+
Sbjct: 42 RRDTTNIIAFGAKPDGVSLNTQAINKAISTCSQ---KGGGVVLVPAGIWLTGPIVLKSNV 98
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
L++ K A LL + D++++ L+ + R R S + GTNL +V +TG +
Sbjct: 99 NLHLKKAATLLFTTDKNQYALVEGVYEGKRA-----ARNQSPVSGTNLANVAITG-QGIL 152
Query: 173 NGQGEPW------------WIK---------------YRKKQF----------------- 188
+G G+ W W + Y +QF
Sbjct: 153 DGNGDVWRAVHKSQLTESQWKEKVESGGVLKDDGKTWYPSEQFKKASTENRSMLLAPGKT 212
Query: 189 --------NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDS 240
+ RP L+ + V + +T +SP+W +HP+ ++ ++ +T + P +
Sbjct: 213 PQDFADMKDFLRPNLVVLTNCKKVLLEGVTFQNSPAWCLHPLMCQDLTLRNVTTKNPEYA 272
Query: 241 PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS 300
N DG++ +SC N IE + GDD + +KSG DE G K GMPT++ IIR +
Sbjct: 273 HNGDGMDIESCKNFLIEGCTLDVGDDAICIKSGKDEEGRKRGMPTENGIIRN-NTVYNGH 331
Query: 301 AAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK---- 356
+GSEMSGG + + + T + T G+R K+ GRG V+ IY + + MK +
Sbjct: 332 GGFVVGSEMSGGARYLFVSNCTFMGTDKGLRFKSVRGRGGVVEHIYAKDIFMKNIAQEAI 391
Query: 357 ----YVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
Y F G + + P + + ++V + + G+ I
Sbjct: 392 FFDMYYFVKFATDGERDERPVVNEGTPVFRNMRFENIVCTGAKKGIFVRGLPEMAIQTIA 451
Query: 413 ISNVTIKLTEKPKEL 427
++N+ ++ TEK EL
Sbjct: 452 MANMVLE-TEKGVEL 465
>gi|375100882|ref|ZP_09747145.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661614|gb|EHR61492.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 485
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 183/373 (49%), Gaps = 44/373 (11%)
Query: 90 GGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGG 149
GG +++VPPG++ TG+ +L S+ L+I + A L SQD +++ LP + + G +
Sbjct: 94 GGGKVVVPPGEYHTGAIHLRSNIELHISRGATLRFSQDPADY--LPMVHTRWEGIELYN- 150
Query: 150 RFSSLIFGTNLTDVVVTGGNATINGQGEP--WW--------------------------- 180
+S ++ + DV +TGG ++GQ P WW
Sbjct: 151 -YSPFVYAHGVHDVAITGG-GVLDGQANPQHWWPWKTEPDGRGGVIETEHRDALHAMAER 208
Query: 181 ---IKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAP 237
++ R+ + RP ++ S ++ +S +TL +SP W +HPV S NV++ G+T+ +P
Sbjct: 209 GVPVEQRRFTDSKLRPNFVQFYRSSDILVSGVTLTNSPMWMIHPVLSENVIVDGVTLDSP 268
Query: 238 IDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
D PN+DG+NP+S N I ++ +GDDC+A+KSG + G ++G+P+++++I
Sbjct: 269 -DGPNSDGVNPESSRNVVIRNSSFDNGDDCIAIKSGRNADGRRIGVPSENIVIHDNRMFD 327
Query: 298 PDSAAIALGSEMSGGIKDVRAED--ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTM 355
+ +GSEMSG +++V AE + + +RIKT RG V+ +Y R + +
Sbjct: 328 -GHGGVVIGSEMSGDVRNVFAERNVMDSPRLDRALRIKTNSVRGGTVEGVYFRDNDIPEV 386
Query: 356 KYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISN 415
+ D G PTV G++ ++ + + L G P T + I +
Sbjct: 387 ADAVIRVNFHYEEGDTG---DFTPTVRGLHIENVHSVGGEFALYLRGYERSPVTDVTIRD 443
Query: 416 VTIKLTEKPKELQ 428
T P L+
Sbjct: 444 STFSEVTTPMLLE 456
>gi|423228811|ref|ZP_17215217.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
gi|423247623|ref|ZP_17228671.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392631516|gb|EIY25487.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392635550|gb|EIY29449.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
Length = 539
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 170/384 (44%), Gaps = 68/384 (17%)
Query: 55 HSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTL 114
+S + DFG DG T NTKA N AI ++ A GG ++I+P G WLTG L S+ L
Sbjct: 59 YSVNIIDFGAKPDGITLNTKAINDAIQQVN---AKGGGKVIIPEGLWLTGPIELLSNVNL 115
Query: 115 YIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATING 174
Y K+AL+L S D S +P++ R R S I + ++ +TG + +G
Sbjct: 116 YTEKNALVLFSADHSLYPIINTSFEGLETR-----RCQSPISARDAENIAITG-HGVFDG 169
Query: 175 QGEPW------------WIKY--------------------------RKKQFNV------ 190
G+ W W K K FNV
Sbjct: 170 NGDTWRPTKKDKLTEGQWKKLIASGGVVDADGRIWYPSEGALKGAILSKDNFNVPRGELT 229
Query: 191 ----------TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDS 240
RP L+ + + V + T +SPSW +HP+ N+ I +T+ P S
Sbjct: 230 DSDWDYMRDWLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYS 289
Query: 241 PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS 300
N D ++ +SC I +N +GDD + +KSG DE G K G P Q++I+ +
Sbjct: 290 QNGDALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLH-GH 348
Query: 301 AAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTM---KY 357
+GSEMSGG+ ++ ++ T + T G+R K+ GRG V+ IY+ + M +
Sbjct: 349 GGFVVGSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEAL 408
Query: 358 VFWM-TGDYGSHPDPGFDPKALPT 380
+F + G G DP D K T
Sbjct: 409 IFNLYYGGKGRGEDPNQDEKKAET 432
>gi|189459631|ref|ZP_03008416.1| hypothetical protein BACCOP_00257 [Bacteroides coprocola DSM 17136]
gi|189433713|gb|EDV02698.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 535
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 197/431 (45%), Gaps = 77/431 (17%)
Query: 55 HSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTL 114
+S +T+FG V DG T NT+AF+ AI + A GG ++IVP G WLTG L S+ L
Sbjct: 57 YSRSITEFGAVADGITLNTEAFDKAIKAV---AEKGGGKVIVPAGLWLTGPIVLQSNINL 113
Query: 115 YIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATING 174
Y+ ++AL+L + D +++P++ R R S I N ++ +TG ++G
Sbjct: 114 YLEENALVLFTADHTQYPIVKTSFEGLETR-----RCQSPISALNAENLAITG-KGVMDG 167
Query: 175 QGEPW------------WIKYRK-------------------------KQFNV------- 190
G+ W W K K FNV
Sbjct: 168 NGDTWRPVKKGKMTANQWKKLVDSGGVLDESGRIWYPSEGSIKGAMACKNFNVPEGINTD 227
Query: 191 ---------TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSP 241
RP L+ + V + +T +SPSW +HP+ ++ I +++ P S
Sbjct: 228 EEWNSIRDWLRPVLLSFIKCKKVLLEGVTFKNSPSWCLHPLSCEDITINNISVSNPWYSQ 287
Query: 242 NTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSA 301
N D ++ +SC I+++ +GDD + +KSG DE G + G P Q++IIR + +
Sbjct: 288 NGDALDLESCNRALIQNSSFDAGDDGICIKSGKDEDGRRRGEPCQNVIIRNNVVLH-GHG 346
Query: 302 AIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVK-----EIYVRRMTMKTMK 356
+GSEMSGG+K++ ++ T + T G+R K+ GRG V+ I + + + +
Sbjct: 347 GFVVGSEMSGGVKNIYVDNCTFLGTDVGLRFKSTRGRGGVVENIHINNINMINIPNEGLI 406
Query: 357 YVFWMTGDYGSHPDPGFDP--KALPTVT-------GINYRDMVADNVTQSAKLDGIRNDP 407
+ + G D +P + +P VT I +++ A NV ++ +G+ P
Sbjct: 407 FDLFYGGKAPGEGDGYNNPTEQKIPAVTEETPAFRDIFIKNVTAKNVGRAILFNGLPEMP 466
Query: 408 FTGICISNVTI 418
I I NVT+
Sbjct: 467 IKNIHIENVTM 477
>gi|329957634|ref|ZP_08298109.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328522511|gb|EGF49620.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 533
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 188/427 (44%), Gaps = 72/427 (16%)
Query: 55 HSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTL 114
++ + FG GDG T NTKA N AI ++ A GG ++++P G WLTG L S+ L
Sbjct: 56 YTVSILQFGAKGDGTTLNTKAINDAIKAVN---AKGGGKVVIPEGLWLTGPIELLSNVNL 112
Query: 115 YIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATING 174
Y K+AL++ + D + +P+L R R S I N ++ +TG + +G
Sbjct: 113 YTEKNALVVFTDDFNAYPILETSFEGLNTR-----RCQSPISARNTENIAITG-HGVFDG 166
Query: 175 QGEPW------------WIKYRK-----------------------KQFNV--------- 190
G+ W W K K FN
Sbjct: 167 SGDSWRPVKKSKLTASQWDALVKSGGVVDKSIWYPTAGSLKGALACKNFNNPEGIETDEE 226
Query: 191 -------TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNT 243
RP L+ ++ S V + +T +SPSW +HP+ ++ I + + P S N
Sbjct: 227 WNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQNG 286
Query: 244 DGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAI 303
D ++ +SC N I +N +GDD + +KSG DE G K G P Q++I++ +
Sbjct: 287 DALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNTVLH-GHGGF 345
Query: 304 ALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY------ 357
+GSEMSGG+K++ D T + T G+R K+ GRG V+ IY+ + M + +
Sbjct: 346 VVGSEMSGGVKNIYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHMIDIPHEPLLFD 405
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGI-----NYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+F+ G + + TV + ++RD+ N+ + + +
Sbjct: 406 LFYGGKAAGEETEEDLKGRMKTTVPQVTVETPSFRDIHISNIICKGSGRAMFFNGLPEMP 465
Query: 413 ISNVTIK 419
I NVT+K
Sbjct: 466 IKNVTVK 472
>gi|423214932|ref|ZP_17201460.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692195|gb|EIY85433.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
Length = 472
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 197/416 (47%), Gaps = 61/416 (14%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGK-WLTGSFNLTSHFTLYIH 117
+ DFG V DG+ AF+ AI+ S GG ++IVP G ++ G S+ +++
Sbjct: 59 IADFGAVADGRMPCKGAFDKAITQCSD---QGGGRIIVPAGTYYMNGPLVFKSNVNIHLE 115
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
A+L S ++ ++ LP + + G + +S LI+ ++ ++ +T G TING G
Sbjct: 116 DGAILNFSSNQEDY--LPAVITRWEGTEL--FNYSPLIYAYHVQNIALT-GKGTINGNGS 170
Query: 178 -------------------------PWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLI 212
P + + + F + RP IE NV+I +T+
Sbjct: 171 KKFSAWADNQNIDKEILRRMGRENLPIYRRIFGEGFRL-RPGFIEPYGCVNVRIEGITIK 229
Query: 213 DSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKS 272
DSP W +HP++ +NV+++ +T+ + + N DG +P+SC+N IE +GDD +A+KS
Sbjct: 230 DSPFWVIHPIFCNNVIVRDVTVDS--HNRNNDGCDPESCSNVLIEGCTFSTGDDAIAIKS 287
Query: 273 GWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRI 332
G D ++G PT++++IR S + + +GSE+SGG+++V E+I+ + + + +
Sbjct: 288 GRDNDAWRIGQPTENVVIRNCTFWSKIN-GVCIGSEISGGVRNVFIENISILKSSNAIYF 346
Query: 333 KTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINY------ 386
K+ + RG Y++ IYVR + +++ GF P +T N
Sbjct: 347 KSNLDRGGYIENIYVRNIQADSVRTALVRVEPNYKGERSGFHPTLFNKITVENVTCGQTN 406
Query: 387 --------------RDMVADNVTQSAKLDGIRNDPFTGICISNVTI---KLTEKPK 425
R++ N+T + R + I NV + KL EKP+
Sbjct: 407 ECAISMAGFPELPIRNITLKNITVDKAVSDYRLEHGENIIFENVRVNGEKLPEKPE 462
>gi|349858579|gb|AEQ20324.1| endopygalactorunase [uncultured bacterium CSLG10]
Length = 452
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 201/417 (48%), Gaps = 49/417 (11%)
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDA 120
D+G GDG T+NT A +AI AA G ++ G +LTGS L S L + K
Sbjct: 29 DYGAKGDGVTANTVAIQSAIDA----AAKTGGTIVFASGVYLTGSIFLKSGTRLRVDKGV 84
Query: 121 LLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW 180
+ QD++ +P++P + G P ++LI ++V ++G I+G G+ WW
Sbjct: 85 EIRGMQDQAAYPVMPTRIA-GIEMKWP----AALINVYEQSNVKISG-QGVIDGDGKMWW 138
Query: 181 IKY---RK----------KQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNV 227
KY RK ++ RP LI++ SDNV++ LTL S W VH YS V
Sbjct: 139 DKYWQVRKDYEPKGLRWAADYDTPRPRLIQIYKSDNVELQGLTLRRSGFWTVHICYSRKV 198
Query: 228 LIQGLTIRAPID--SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPT 285
+ G+TIR I P+TDGI+ DS ++ +++ I DD + +K+G D G++V PT
Sbjct: 199 TVDGVTIRNNIGGRGPSTDGIDVDSSSDVLVQNADIECNDDAIVMKAGRDADGLRVNRPT 258
Query: 286 QHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN-TQSGVRIKTAVGRGAYVKE 344
++++I + + +A I GSE SGGI+ V A I + + G+ K+A RG V++
Sbjct: 259 ENVVIHD-VTVRDGAAGITFGSETSGGIRHVEAYRIHVLAPSPIGILFKSAATRGGTVED 317
Query: 345 IYVRRMTMKTMKYVFWMTGDY-----------GSHPDPGF---------DPKALPTVTGI 384
I + + M+ + F + ++ G P + + LP + I
Sbjct: 318 ISIHDIDMRNVPTAFSVNFNWNPNYSYAKIPQGLQNVPDYYKVMTQEVPRAQGLPHLKNI 377
Query: 385 NYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRV 441
++ A TQ+ + + P G+ N+ I+ T++ +Q N N + +R+
Sbjct: 378 RISNIKASGSTQAFSVGAYADAPLQGVTFRNIDIQ-TQRAGTIQ-NAENWKFEKTRI 432
>gi|421078108|ref|ZP_15539067.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
gi|392523693|gb|EIW46860.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
Length = 453
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 200/425 (47%), Gaps = 56/425 (13%)
Query: 54 KHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFT 113
+ V+TDFG VGDG T AF + ++ A GG +++VP G +LTG + S+
Sbjct: 35 RRDFVVTDFGAVGDGIMDCTDAFRRVM--MAANTA-GGGRVVVPAGIYLTGPIHFKSNVN 91
Query: 114 LYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG-GNATI 172
LY+ K+A + SQD ++ LP + + G + +S LI+ ++ +TG G
Sbjct: 92 LYVSKEATVKFSQDLEKY--LPMVLNRFEGVELY--NYSPLIYSYGAVNIAITGEGILDG 147
Query: 173 NGQGEPWW-------------------------------IKYRKKQF---NVTRPYLIEV 198
NG E WW + +++F + RP I+
Sbjct: 148 NGDNEHWWPWKGLTQYGWQEGQAHQAEDRDVLFAMAEQNVPVEERKFGSGHYLRPSFIQF 207
Query: 199 MFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIED 258
S N+ I +T+ DSP W + PV N+ I + I PNTDG NPDSC N I++
Sbjct: 208 YNSKNILIEGITVKDSPMWQISPVLCENITIDKVKIVG--HGPNTDGFNPDSCKNILIKN 265
Query: 259 NYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRA 318
Y +GDDC+A+KSG + G ++ +P ++++I+ + I +GSE+SG +++V A
Sbjct: 266 CYFNNGDDCIAIKSGRNGDGRRINIPCENIVIQNNY-MKDGHGGITIGSEISGSVRNVFA 324
Query: 319 ED--ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTM-KYVFWMTGDYGSHPDPGFDP 375
+ + + N +R KT RG ++ IY + T+K++ + +F + DY + G
Sbjct: 325 DHNVMDSPNLDRALRFKTNSVRGGIIENIYFKNTTVKSIGEEIFIVDMDY----EEGDAG 380
Query: 376 KALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQ 435
+ P V I ++ + + P + + +N + E P L+ N++
Sbjct: 381 EYTPIVRNIFVENLESYGGKTGILMSAYDRTPISNVQFTNCILHNVETPFVLK----NVE 436
Query: 436 GITSR 440
G+ +
Sbjct: 437 GLVFK 441
>gi|326800288|ref|YP_004318107.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326551052|gb|ADZ79437.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 543
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 184/394 (46%), Gaps = 75/394 (19%)
Query: 18 KILSTLLTL----GLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNT 73
KIL T++ L G + ++AE PT + T +K + +T FG + G+ NT
Sbjct: 3 KILKTVILLIFTHGAFAQKLAE--PTVSLPTF-------KKDTVSITAFGAISGGRHLNT 53
Query: 74 KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPL 133
++ N AI K GG +++P G WL+G L S+ L++ +ALL ++D S++ L
Sbjct: 54 ESINQAIDQTHK---KGGGVVLIPAGVWLSGPITLKSNINLHLAANALLQFTKDFSQYSL 110
Query: 134 LPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPW------------WI 181
+ P R S I+ N ++ +TG I+G G+ W W
Sbjct: 111 VQT-----SWEGIPQMRNQSPIWALNQQNIAITG-KGVIDGNGDAWRMVKKAKMTETQWK 164
Query: 182 KY-----------------------------------RKKQF-----NVTRPYLIEVMFS 201
K + QF + RP +I +
Sbjct: 165 KLISSGGVLNEKGDIWYPSQSSLKGASYKDPGLVEKGKNAQFYEEIKDYLRPNMILLEKC 224
Query: 202 DNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYI 261
+ + + +T +S +WN+HP+ S+++ I+ + +R P S N DG++ +SC N +E +
Sbjct: 225 ERILLEGVTFQNSAAWNIHPLMSADLTIRNINVRNPWYSQNGDGLDIESCKNVLVEQSTF 284
Query: 262 VSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDI 321
GDD + +KSG +E G + GMPT++L +R + +GSEMSGG K++ ++
Sbjct: 285 DVGDDAICIKSGRNEAGRERGMPTENLWVRNC-TVYHAHGGFVVGSEMSGGAKNLYVDNC 343
Query: 322 TAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTM 355
T I T G+R KT GRG V+ +Y+ + MK +
Sbjct: 344 TFIGTDIGLRFKTTRGRGGVVENVYINNIFMKDI 377
>gi|354581296|ref|ZP_09000200.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
gi|353201624|gb|EHB67077.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
Length = 522
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 190/423 (44%), Gaps = 71/423 (16%)
Query: 54 KHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFT 113
+++ ++TD+G VGDG NT AF+ AI +K GG ++++PPG W TG L S
Sbjct: 17 EYTVMITDYGAVGDGVYDNTLAFHQAIEACAKA---GGGKVVIPPGIWHTGPLTLQSRIE 73
Query: 114 LYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATIN 173
L+ AL++ S+ +P+ + +Y GR R S + G L D+ TG + +
Sbjct: 74 LHASAGALVMFSKQFEAYPIR--MSAY-EGRQMF--RCQSPLDGEGLEDIAFTG-SGIFD 127
Query: 174 GQGEP-----------------------------WW-----------------IKYRKKQ 187
G GE WW R Q
Sbjct: 128 GGGEAWRPVKQGKLTESQWDRLIHTGGVVDDGGLWWPTPAARDGMENLARIEQTGSRNPQ 187
Query: 188 -----FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPN 242
+ RP L+ + + ++ T +S +W +HP S + IQ +T+R P + N
Sbjct: 188 DYEPVRDYLRPNLLSLRNCKRILLNGPTFQNSAAWCLHPWASEQITIQNITVRNPWYAQN 247
Query: 243 TDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAA 302
DG++ DSC +E++ GDD + +KSG +E G +G P++ + IR +
Sbjct: 248 GDGLDIDSCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERISIRNCT-VYHGHGG 306
Query: 303 IALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMK-----TMKY 357
I +GSEMSGGIKDV D I T G+R K+ GRG V+ I++ R+ M+ + +
Sbjct: 307 IVVGSEMSGGIKDVHVSDCNFIGTDIGIRFKSCRGRGGVVENIFIERIRMREIDGDAISF 366
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGIN--YRDMVADNVTQSAKLDGIRNDPFTGICISN 415
+ G GS + +A+ VT +R++V ++ S + + + + N
Sbjct: 367 NLYYEGKAGSGE---YQAEAMLPVTEETPVFRNIVIQDIVCSGAHTALLINGLPEMPVEN 423
Query: 416 VTI 418
VT+
Sbjct: 424 VTV 426
>gi|418938241|ref|ZP_13491792.1| glycoside hydrolase family 28 [Rhizobium sp. PDO1-076]
gi|375055025|gb|EHS51309.1| glycoside hydrolase family 28 [Rhizobium sp. PDO1-076]
Length = 503
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 184/386 (47%), Gaps = 29/386 (7%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG + N +A +AI+ A G L +P G W +G L S+ TL I +
Sbjct: 88 IRDFGASTE-SADNARAIQSAIA-----AIPAGGTLRLPAGSWSSGPVFLKSNMTLLIEE 141
Query: 119 DALLLASQDESEWPLLPPLPSYGR------GRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
A+L + +LP + GR G EP F+SLI + ++ +TG TI
Sbjct: 142 GAVLADTGSRQGRKVLPARHADGRVLGTWEGVAEPC--FASLINAIDCQNLAITG-QGTI 198
Query: 173 NGQGE--PWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQ 230
+G G+ WW ++ + RP I + +V +S +T+ +SPSW +HPV +VL
Sbjct: 199 DGGGDRGDWWTWPKETRDGARRPRTIFLSDCRHVTLSGITVRNSPSWTIHPVLCEHVLAV 258
Query: 231 GLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLII 290
GLTIR SPNTDG+NP++ ++ R+ I GDDC+A+K+G + PT+ + I
Sbjct: 259 GLTIRNDPLSPNTDGLNPEASSDIRLIGLDISVGDDCIAIKAGKRDPRGGPDRPTRRVEI 318
Query: 291 RRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRM 350
R + + A+ +GSEMS GI DV + T G+RIKT GRG V +I++ +
Sbjct: 319 RNCL-MQLGHGAVVMGSEMSRGIHDVSISRCHFVGTDRGLRIKTRRGRGGAVSDIHLSQC 377
Query: 351 TMK------TMKYVFWMTGDYGSHPDPGFDPKAL----PTVTGINYRDMVADNV-TQSAK 399
M + ++ D S +P L P ++ I RD+V T +A
Sbjct: 378 RMDGVATPIAVNAFYFCDADGRSEYVQSRNPLPLSIETPRISNITIRDVVVSGAETAAAV 437
Query: 400 LDGIRNDPFTGICISNVTIKLTEKPK 425
G+ + + ++I E K
Sbjct: 438 FYGLPECEIDAVSVDGLSIVYGEGAK 463
>gi|182415146|ref|YP_001820212.1| galacturan 1,4-alpha-galacturonidase [Opitutus terrae PB90-1]
gi|177842360|gb|ACB76612.1| Galacturan 1,4-alpha-galacturonidase [Opitutus terrae PB90-1]
Length = 478
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 195/377 (51%), Gaps = 40/377 (10%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
LTDFG VGDG T NT+AF AI+ ++K GG +L+VP G + TG F L S L++
Sbjct: 91 LTDFGAVGDGTTLNTEAFARAIAAVAKA---GGGKLVVPAGTFRTGPFALCSSLELHLEA 147
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSS---LIFGTNLTDVVVTGGNATINGQ 175
AL+ A ++W L P P+ + E LI G L DV +TG + I+G
Sbjct: 148 GALIQAPATFADWGL--PEPTTFSSQAEVNAAVKPVPPLIHGRKLHDVAITG-SGQIDGN 204
Query: 176 GEPWWI------KYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
G WW + ++ + R ++I + + ++++++TL +S +++ P +++ I
Sbjct: 205 GALWWAWSERAARAQRGRLVYKRTHMIIIDGCERLRVADVTLSNSAMFHLVPRRITDLTI 264
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
+ + +RAP ++PNTD I+P S TN I I +GDD + +KSG I+
Sbjct: 265 ERVKVRAPEEAPNTDAIDPGSVTNAWIHHCDIDTGDDNIVIKSGGTNILIE--------- 315
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRR 349
C+ I++GSE + G++++ + T +G+RIK+ G G V+ I
Sbjct: 316 ----DCVIKHGHGISIGSETTEGVRNMLVRRCSFDGTDNGIRIKSMRGAGGVVENIRYTG 371
Query: 350 MTMKTMKYVFWMTGDYGSHPDPGF--DPKALPTVTGINYRDMVADNVT-----QSAKLDG 402
+TMK ++ + Y + P F DP +P + RD++ D+VT ++ K+ G
Sbjct: 372 ITMKDVENAIVLDLTYTDNNRPNFRGDPTKIPVI-----RDILIDHVTVTGSLKAGKIVG 426
Query: 403 IRNDPFTGICISNVTIK 419
+ + P +G+ + +VTI+
Sbjct: 427 LPDSPISGVTLRDVTIQ 443
>gi|392950256|ref|ZP_10315813.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
gi|392434538|gb|EIW12505.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
Length = 427
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 136/247 (55%), Gaps = 11/247 (4%)
Query: 90 GGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGG 149
GG QL + G + GS L S FTL++ A+L S E + PP+ S G +
Sbjct: 35 GGGQLNLTAGVYEVGSLELGSDFTLFLEAGAVLKFSH---ETDVYPPVESRWEGATQT-- 89
Query: 150 RFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKK--QFNVTRPYLIEVMFSDNVQIS 207
+ + ++G++L V +TG ++GQG+ WW ++ +K + RPYL + S+ V I
Sbjct: 90 VYRACLYGSHLKRVKITG-EGVVDGQGKKWWRRFDEKAAELEYPRPYLCSIEHSEQVVIE 148
Query: 208 NLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDC 267
N+T ++SP+W +HP NV I +T+ P +SPNTDG++P+SC N RI + GDDC
Sbjct: 149 NVTFVNSPAWTLHPFDCENVAINNVTVVNPKNSPNTDGLDPESCRNIRIANCCFDVGDDC 208
Query: 268 VAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQ 327
+A+KSG ++ + +++II + + GSEMSG I++V + +T
Sbjct: 209 IAIKSGTEDASQSIA--CENIIISGCNMVH-GHGGVVFGSEMSGDIRNVTISNCVFQDTD 265
Query: 328 SGVRIKT 334
G+R KT
Sbjct: 266 RGIRFKT 272
>gi|167762022|ref|ZP_02434149.1| hypothetical protein BACSTE_00368 [Bacteroides stercoris ATCC
43183]
gi|167700114|gb|EDS16693.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 516
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 192/427 (44%), Gaps = 77/427 (18%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L +F VG+G+T T AF AI+ LS+ GG L+VP G WLTG L S+ L++ K
Sbjct: 62 LKEFNAVGNGETLCTSAFADAINALSE---QGGGHLVVPAGVWLTGPIVLKSNIDLHLEK 118
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A++L S D +PL+ + G D R S I G NL +V +TG A I+G G
Sbjct: 119 GAVILFSPDVDLYPLVE---TVFEGLDTR--RCQSPISGRNLENVAITGEGA-IDGNGHY 172
Query: 179 W----------------------------WIKY-------------------RKKQFNVT 191
W W Y ++++
Sbjct: 173 WRPLKREKVTESVWKQTTARGGVYKRPTYWFPYPETLKGDTISNMNVPQNLKTEEEWQSV 232
Query: 192 RPYLIEVMFS----DNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGIN 247
R +L VM S NV + + +SP+WN+HP+ NVL++ + +R P + N DG++
Sbjct: 233 RHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLVEDVQVRNPSYAQNGDGLD 292
Query: 248 PDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGS 307
+SC N I ++ GDD + +KSG DE G + P +++++ + +GS
Sbjct: 293 LESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCT-VFKGHGGFVVGS 351
Query: 308 EMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM-----KTMKYVFWMT 362
EMSGG+++V + + T G+R K+ GRG V+ I++ ++M + + + +
Sbjct: 352 EMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWITNVSMMDIPTEPITFNLYYG 411
Query: 363 G-------DYGSHPDPGFDP----KALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGI 411
G + G DP + P I+ +++V ++ +GI P +
Sbjct: 412 GKSAVEVLESGEKVPAKVDPLPVDETTPCFRNIHVKNLVCAGARRALFFNGIPEMPIENV 471
Query: 412 CISNVTI 418
+ +V I
Sbjct: 472 VLEDVDI 478
>gi|329962420|ref|ZP_08300420.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529976|gb|EGF56864.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 532
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 163/350 (46%), Gaps = 61/350 (17%)
Query: 54 KHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFT 113
++S + DFGG DG NT+A N AI ++ A GG ++I+P G WLTG L S+
Sbjct: 55 EYSVNIVDFGGKNDGVALNTQAINDAIKAVN---AHGGGKVIIPEGIWLTGPIELLSNVN 111
Query: 114 LYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATIN 173
LY K+AL++ + D S +P++ + G D R S I N ++ +TG +
Sbjct: 112 LYTEKNALVVFTDDFSAYPIIK---TSFEGLDTR--RCQSPISARNAENIAITG-YGVFD 165
Query: 174 GQGEPW------------WIKYRK-----------------------KQFNV-------- 190
G G+ W W K K FN
Sbjct: 166 GSGDSWRPVKKGKLTASQWEALVKSGGVVDKSIWYPTAGALKGALACKNFNNPEGIDTDE 225
Query: 191 --------TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPN 242
RP L+ ++ S V + +T +SPSW +HP+ ++ I + + P S N
Sbjct: 226 EWNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINNVKVFNPWYSQN 285
Query: 243 TDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAA 302
D ++ +SC N I +N +GDD + +KSG DE G + G P Q+++++ +
Sbjct: 286 GDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRRRGEPCQNVVVKDNTVLH-GHGG 344
Query: 303 IALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+GSEMSGG+K++ D T + T G+R K+ GRG V+ IY+ + M
Sbjct: 345 FVVGSEMSGGVKNIYVSDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM 394
>gi|390956451|ref|YP_006420208.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
gi|390411369|gb|AFL86873.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
Length = 423
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 196/408 (48%), Gaps = 36/408 (8%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
+G DGKT +T A AI + A +I+ G +L+G L S TL I K A
Sbjct: 29 YGAKADGKTKDTAAIQKAI----EICAPKHGTVILKGGTFLSGPLTLRSDLTLEIDKGAT 84
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGN---ATINGQGEP 178
LL S+D ++PL R++ R +L+ +++++ VTGG I+G G+
Sbjct: 85 LLGSRDIDDYPL----------REDAKWRRVALLHADHVSNLRVTGGKTEGGIIDGSGDI 134
Query: 179 WWIKYRKKQF--------NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQ 230
+W R + RP L+++ S ++ ++TL +SP +N+ + + I
Sbjct: 135 FWEMARTHRVPNDTSGSGGYPRPMLVDITESQHLTFDHITLQNSPMYNLTFFFCDGIKID 194
Query: 231 GLTIRAPIDS-PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
IR P + PNTDGI+P S N I I +GDD +A+KSG E K+G P +H+
Sbjct: 195 HTIIRNPAKTGPNTDGIDPFSSKNIEISYVDIDTGDDDIALKSGLVERDPKIG-PVEHVY 253
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRR 349
I I +++GSE++GGI DVR E+I NT +GVRIK+ RG + +++ +
Sbjct: 254 IHD--SIFRHGHGLSVGSELAGGISDVRVENIVMENTDAGVRIKSNRTRGNDIHDLHYKN 311
Query: 350 MTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLD----GIRN 405
+ M + +T Y P G D + D+ +N+T + D GI
Sbjct: 312 IQMTGVGQPIQITEYYPKWPAAGTDTAKAVDAHTPRFHDISLENITATGAKDAIIIGIPE 371
Query: 406 DPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKE 453
P + ++ ++I EK +++ +Q + V P + E + K+E
Sbjct: 372 YPIQNLTLTKISIS-GEKGLQIRNAEVTMQDVV--VKPASGEAIVKEE 416
>gi|317056840|ref|YP_004105307.1| glycoside hydrolase family protein [Ruminococcus albus 7]
gi|315449109|gb|ADU22673.1| glycoside hydrolase family 28 [Ruminococcus albus 7]
Length = 513
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 151/307 (49%), Gaps = 22/307 (7%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG GDG + +T + TAI+ L +L P G +LT L SH TL I +
Sbjct: 79 VRDFGAKGDGFSDDTVSIQTAINCLPN-----NGRLYFPEGVYLTAPIVLKSHITLDISE 133
Query: 119 DALLLASQDESEWPLLPPLPS---------YGRGRDEPGGRFSSLIFGTNLTDVVVTGGN 169
A LL D+S + ++P +G +LIF D+ + G
Sbjct: 134 KAKLLGLPDQSAYNVIPGTAKDIITGEDIHFGTWEGNAVPMHQALIFAEYAEDIRIVG-R 192
Query: 170 ATINGQGEP--WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNV 227
I+G E WW +++ N+ RP L+ + + +T+ ++ SW +HP +SS +
Sbjct: 193 GVIDGNAEAGGWWENVKER--NIPRPRLLFFNRCKLITVHGITVCNAASWQIHPYFSSYL 250
Query: 228 LIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQH 287
L I AP DSPNTD ++P++C N I GDDC+A+KSG + G K P ++
Sbjct: 251 HFLDLDITAPKDSPNTDALDPEACDNVWISGCRFSVGDDCIAIKSGKIDIGRKFKQPAEN 310
Query: 288 LIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG--AYVKEI 345
IR + + A+ LGSEM+GG++++ E +T G+RIKT GRG A + +
Sbjct: 311 HNIRNCL-MQFGHGAVTLGSEMAGGVRNLTVERCIFDHTDRGLRIKTRRGRGKDAVIDGV 369
Query: 346 YVRRMTM 352
+M M
Sbjct: 370 LFEKMKM 376
>gi|224536305|ref|ZP_03676844.1| hypothetical protein BACCELL_01177, partial [Bacteroides
cellulosilyticus DSM 14838]
gi|224522067|gb|EEF91172.1| hypothetical protein BACCELL_01177 [Bacteroides cellulosilyticus
DSM 14838]
Length = 434
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 161/345 (46%), Gaps = 61/345 (17%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L DFG VG+G+ T AF AI L A GG LIVP G W TG L S+ L++ K
Sbjct: 52 LADFGAVGNGEELCTAAFAKAIDTL---AEKGGGHLIVPAGVWFTGPIVLKSNIDLHLEK 108
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A++L S D +PL+ + G D R S + G NL +V +TG A I+G G
Sbjct: 109 GAVILFSPDVDLYPLVE---TVFEGLDTR--RCQSPVSGRNLENVAITGEGA-IDGNGHY 162
Query: 179 W----------------------------WIKY-------------------RKKQFNVT 191
W W Y ++++
Sbjct: 163 WRPLKREKVTEGVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLKTEEEWQSV 222
Query: 192 RPYLIEVMFS----DNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGIN 247
R +L VM S NV + + +SP+WN+HP+ NVLI+ + +R P + N DG++
Sbjct: 223 RHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNGDGLD 282
Query: 248 PDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGS 307
+SC N I ++ GDD + +KSG DE G + G +++++ + +GS
Sbjct: 283 LESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRGRVCENVVVDGCT-VFKGHGGFVVGS 341
Query: 308 EMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
EMSGG+++V + + T G+R K+ GRG V+ I++R + M
Sbjct: 342 EMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNIAM 386
>gi|281423599|ref|ZP_06254512.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella oris F0302]
gi|281402419|gb|EFB33250.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella oris F0302]
Length = 856
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 170/346 (49%), Gaps = 56/346 (16%)
Query: 54 KHSAVLTDFGG-VGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
+ + V+T FG N +A + AI+ L+K GG +++VP GKW TG+ L S
Sbjct: 41 ERTVVITKFGAKTTASAVQNQQAIHRAIAYLAK---QGGGKVVVPAGKWQTGALRLASGI 97
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
L + KDALL D S +PL+ +S I+ DVVV+ G TI
Sbjct: 98 ELVVSKDALLQFVFDRSLYPLVKT-----SWEGMMCWNYSPCIYSYGADDVVVS-GEGTI 151
Query: 173 NGQG--EPWW----------------------------------IKYRKKQFNV---TRP 193
+G G E WW + + +++F + RP
Sbjct: 152 DGGGSNETWWPMCGKQVFGYVKGVTKEAQVSGSRRRLQQFAEDDVPWDERRFGLGQGLRP 211
Query: 194 YLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTN 253
LI + + V++S +TL+ SP W +HP+ NV + G+ I + PN DG +P++C N
Sbjct: 212 QLINFVKGNRVRVSGVTLLHSPFWVIHPLLCKNVTVDGVKIWN--EGPNGDGCDPEACEN 269
Query: 254 TRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGG 312
I++ + +GDDC+A+KSG + G P++++IIR C+ D I +GSE+SGG
Sbjct: 270 VLIQNTHFHTGDDCIAIKSGRNNDGRMWNKPSRNIIIRN--CVMEDGHGGIVIGSEISGG 327
Query: 313 IKDVRAEDIT--AINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK 356
K+V AED T + + +RIKT RG ++ I +RR+ + K
Sbjct: 328 CKNVYAEDCTMDSPHLDRVLRIKTNNCRGGRIENINMRRVKVGQCK 373
>gi|254295110|ref|YP_003061133.1| glycoside hydrolase family protein [Hirschia baltica ATCC 49814]
gi|254043641|gb|ACT60436.1| glycoside hydrolase family 28 [Hirschia baltica ATCC 49814]
Length = 469
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 165/337 (48%), Gaps = 50/337 (14%)
Query: 54 KHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFT 113
K +LTDF GDG NT AF AI K GG Q+ VP G +LTG+ L S+
Sbjct: 52 KAQFLLTDFDARGDGIFDNTAAFKAAIDACRKA---GGGQIRVPDGHYLTGAIQLHSNIE 108
Query: 114 LYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATIN 173
L + A L+ S D ++P++ R +S LI+ + +V +TG ++
Sbjct: 109 LNVSAGARLIFSTDPMDYPVV-----LTRYEGVEVMNYSPLIYARDAKNVAITG-EGVLD 162
Query: 174 GQG--EPWW-------------------------------IKYRKKQF---NVTRPYLIE 197
GQ E WW I +++F + RP +E
Sbjct: 163 GQASNEHWWPWCGAERFGWREGVGHQTPDRQALFEMAESGIPVEQRRFGPGHYLRPSFVE 222
Query: 198 VMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIE 257
+NV + ++ L DSP WN+HPV S NV+++G+ + PN DG NP+S + IE
Sbjct: 223 FYNCENVLVEDIHLKDSPFWNIHPVLSRNVIVRGVEVVG--HGPNNDGCNPESVDHMLIE 280
Query: 258 DNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVR 317
+ Y +GDDC+A+KSG + G +V +P+++++IR + + +GSE+SG + +V
Sbjct: 281 NCYFDTGDDCIAIKSGRNADGRRVAVPSENILIRNCQ-MKAGHGGVVIGSEISGDVFNVY 339
Query: 318 AED--ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
AE + + + +RIK RG V+ I++R + +
Sbjct: 340 AEGCAMDSPDLWYMLRIKNNAMRGGVVENIHLRNIEV 376
>gi|373955264|ref|ZP_09615224.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373891864|gb|EHQ27761.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 549
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 170/349 (48%), Gaps = 62/349 (17%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ F GDG T NT + N AI++ S+ ++VP G WLTG +L S+ L+I +
Sbjct: 42 IKQFDAKGDGLTLNTNSINDAITSCSEKGG---GVVLVPGGVWLTGPIDLKSNVNLHIDR 98
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
D +LL ++D +++P++ G P GR S I G +L ++ +TG I+G G+
Sbjct: 99 DGILLFTKDFNQYPIVE-----GSYEGLPAGRCKSPISGKDLQNIAITG-TGIIDGNGDA 152
Query: 179 WWIKYRKK------------------------------------------------QFNV 190
W + + K F V
Sbjct: 153 WRMVKKDKLTATQWQDKIASGGLLSADKKTWYPTEKSLKGSQAKDPGILKEGRSIQDFEV 212
Query: 191 ----TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGI 246
RP ++ + + + +T +SP+WN+HP S++ ++G+ ++ P + N DGI
Sbjct: 213 YKDFLRPNMVVLNNCKRILLEGVTFQNSPAWNLHPFLCSDLTLRGVNVKNPWYAQNGDGI 272
Query: 247 NPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALG 306
+ +S TNT IE++ GDD + +KSG DE G K+G PT+++I+R + + +G
Sbjct: 273 DLESSTNTLIENSTFDVGDDGICIKSGRDEAGRKLGKPTENVIVRNCV-VYHAHGGFVIG 331
Query: 307 SEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTM 355
SEMSGG K++ + + + T G+R KT GRG V+ IYV + MK +
Sbjct: 332 SEMSGGAKNIFVYNCSFLGTDVGLRFKTTRGRGGVVQNIYVTNINMKDI 380
>gi|317503775|ref|ZP_07961787.1| glycoside hydrolase [Prevotella salivae DSM 15606]
gi|315665072|gb|EFV04727.1| glycoside hydrolase [Prevotella salivae DSM 15606]
Length = 856
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 171/345 (49%), Gaps = 56/345 (16%)
Query: 55 HSAVLTDFGGVGDGKTS-NTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFT 113
S V+T FG + N +A AI+ L++ GG +++VP GKW TG+ L+S
Sbjct: 42 RSVVITKFGAKTTASAAQNQRAIQKAIAFLAR---QGGGKVVVPAGKWHTGALRLSSGIE 98
Query: 114 LYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATIN 173
L + KDALL + S +PL+ +S I+ DVVV+ G TI+
Sbjct: 99 LVVSKDALLQFVFERSLYPLVKT-----SWEGMMCWNYSPCIYSFGSDDVVVS-GEGTID 152
Query: 174 GQG--EPWW----------------------------------IKYRKKQFNV---TRPY 194
G G E WW + + +++F + RP
Sbjct: 153 GGGSNETWWPMCGKEVFGYVKGVTKEAQVLGSRRRLQQMAEDDVPWDERRFGLGYGLRPQ 212
Query: 195 LIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNT 254
LI + + V++S +TL++SP W +HP+ NV + G+ I + PN DG +P++C N
Sbjct: 213 LINFVKGNRVRVSGVTLLNSPFWVIHPLQCKNVTVDGVKIWN--EGPNGDGCDPEACENV 270
Query: 255 RIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGI 313
I++ + +GDDC+A+KSG + G P++++IIRR C+ D I +GSE+SGG
Sbjct: 271 LIQNTHFHTGDDCIAIKSGRNNDGRLWNQPSKNIIIRR--CVMEDGHGGIVIGSEISGGC 328
Query: 314 KDVRAEDIT--AINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK 356
+V AED T + + +RIKT RG ++ I VRR+ + K
Sbjct: 329 MNVFAEDCTMDSPHLDRVLRIKTNNCRGGRIENINVRRVKVGQCK 373
>gi|197105923|ref|YP_002131300.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
gi|196479343|gb|ACG78871.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
Length = 468
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 184/407 (45%), Gaps = 55/407 (13%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLT-GSFNLTSHFTLYIHKDA 120
FGG DG++ A AI + GG ++ + PG W + G L SH L + A
Sbjct: 63 FGGRADGRSDARPAIQKAIDAAHRA---GGGRVTLSPGVWFSRGPVRLKSHVELRVEAGA 119
Query: 121 LLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG---- 176
LL S + ++ LPP+ + G + +S I+ + DV +TGG I+G
Sbjct: 120 TLLFSPEPDDY--LPPVKTRWEGTEVY--TYSPFIYAAGVEDVAITGG-GVIDGNAQSRF 174
Query: 177 -------EPWWIKYRKKQFNVT-------------RPYLIEVMFSDNVQISNLTLIDSPS 216
EP + + R+ F RP LI+V V++ T +SP
Sbjct: 175 HAWHNLAEPDFQRLRRMGFEGVPVAQRRFGKGTHLRPPLIQVFGGKRVRLEGFTARNSPF 234
Query: 217 WNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDE 276
W H VY+ V+++G+T+ + PN DG++ +S T IE++ +GDD V +KSG D
Sbjct: 235 WVNHLVYADEVVVRGITVDSHF--PNNDGVDVESSTRVLIENSRFRTGDDSVVIKSGRDL 292
Query: 277 YGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAV 336
G ++G P+ +++R D IALGSEMSGG+ DV D S +R K +
Sbjct: 293 DGRRIGRPSAWVLVRGNDMGGED--GIALGSEMSGGVHDVFFTDNVLRKGLSAIRFKANL 350
Query: 337 GRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQ 396
RG V+ + VR MT++ +FW +Y PG P+ YRD+V +N
Sbjct: 351 DRGGTVERVRVRNMTVEDFGTLFWFQLNY-----PGELGGNFPS----TYRDIVFENFKV 401
Query: 397 SA-----KLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGIT 438
+ P + + N+ ++ + P W N++ +T
Sbjct: 402 GGAGTFFEAHAPAQAPLKDVVLRNIVVREAKVP----WVLENVERLT 444
>gi|299141314|ref|ZP_07034451.1| exo-poly-alpha-D-galacturonosidase [Prevotella oris C735]
gi|298577274|gb|EFI49143.1| exo-poly-alpha-D-galacturonosidase [Prevotella oris C735]
Length = 858
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 171/346 (49%), Gaps = 56/346 (16%)
Query: 54 KHSAVLTDFGGVGDGKTS-NTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
K + V+T FG + N +A + AI+ L+K GG +++V GKW TG+ LTS
Sbjct: 43 KRTVVITKFGAKTTASAAQNQQAIHRAIAYLAKL---GGGKVVVLAGKWQTGALRLTSGI 99
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
L + KDALL D S +PL+ +S I+ DVVV+ G TI
Sbjct: 100 ELVVSKDALLQFVFDRSLYPLVKT-----SWEGMMCWNYSPCIYSYGADDVVVS-GEGTI 153
Query: 173 NGQG--EPWW----------------------------------IKYRKKQFNV---TRP 193
+G G E WW + + +++F + RP
Sbjct: 154 DGGGSNETWWPMCGKQVFGYVKGVTKEAQVSGSRRRLQQFAEDDVPWDERRFGLGQGLRP 213
Query: 194 YLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTN 253
LI + + V++S +TL+ SP W +HP+ NV + G+ I + PN DG +P++C N
Sbjct: 214 QLINFVKGNRVRVSGVTLLHSPFWVIHPLLCKNVTVDGVKIWN--EGPNGDGCDPEACEN 271
Query: 254 TRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGG 312
I++ + +GDDC+A+KSG + G P++++IIR C+ D I +GSE+SGG
Sbjct: 272 VLIQNTHFHTGDDCIAIKSGRNNDGRMWNKPSRNIIIRN--CVMEDGHGGIVIGSEISGG 329
Query: 313 IKDVRAEDIT--AINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK 356
K+V AED T + + +RIKT RG ++ I +RR+ + K
Sbjct: 330 CKNVYAEDCTMDSPHLDRVLRIKTNNCRGGRIENINMRRVKVGQCK 375
>gi|379720205|ref|YP_005312336.1| hypothetical protein PM3016_2299 [Paenibacillus mucilaginosus 3016]
gi|378568877|gb|AFC29187.1| hypothetical protein PM3016_2299 [Paenibacillus mucilaginosus 3016]
Length = 518
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 185/387 (47%), Gaps = 44/387 (11%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+T+FG V DG+T NT+A AI A G +++VP G ++TG+ L S TLY+ +
Sbjct: 103 ITEFGAVADGQTINTEAIQAAID-----ACTAGGKVVVPKGTFVTGAIFLKSRMTLYVEQ 157
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIF----GTNLTDVVVTGGNATING 174
+LL S + ++P++ GR++ ++SLI + ++ G I+
Sbjct: 158 GGVLLGSDNPDDYPVMQ---YRWEGREQLC--YASLINTKDPAEGRLEQIIIEGEGKIDA 212
Query: 175 QGEPWWIK--YRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
G + K KK F R + + D V + ++T+ SP+W VH +Y + V + +
Sbjct: 213 NGMALFHKEMAEKKGF---RGRAVCLRNVDGVYLKDITVRQSPAWCVHLIYCNGVSVNHV 269
Query: 233 TIRAPIDSP--------NTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMP 284
I D N DG+NPDS ++ I ++ I S DDC+A+KSG +E G +VG+P
Sbjct: 270 EIHTKKDERGRRYEHIFNGDGLNPDSTSDVYIFNSMIASQDDCIAIKSGRNEEGRRVGIP 329
Query: 285 TQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKE 344
+Q++ I CI +A GSEMSGG+++VR D + S IK GRGA ++
Sbjct: 330 SQNIRISN--CIFKSGFGVATGSEMSGGVRNVRISDCRFEDVYSIATIKAPRGRGAVIEN 387
Query: 345 IYVRRMTMKTMKYVF----WMTG-----DYGSHPDPGFDP-----KALPTVTGINYRDMV 390
+ V T+ W G + SH D D + + I+ +++V
Sbjct: 388 VTVEDCTLTNYSLEHEDCRWFRGAINIDQFYSHADFDADKVEEVDEGTSVIRNIHLKNIV 447
Query: 391 AD-NVTQSAKLDGIRNDPFTGICISNV 416
D + + + G+ P I + NV
Sbjct: 448 LDTHAGNAVFMAGLPESPLQNIRLENV 474
>gi|371778396|ref|ZP_09484718.1| glycoside hydrolase [Anaerophaga sp. HS1]
Length = 572
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 164/349 (46%), Gaps = 69/349 (19%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG VGDG T N++AF AI +S+ GG ++IVP G WLTG + S+ L++ +
Sbjct: 65 IVDFGAVGDGVTDNSEAFAKAIDYVSE---KGGGRVIVPRGIWLTGPIIMKSNIDLHVQQ 121
Query: 119 DALLLASQDESEWPLLPP----LPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATING 174
A++ S D ++PL+ L ++ R S I NL ++ TG +G
Sbjct: 122 GAVVRFSPDFEDYPLIETIFEGLNTF---------RCMSPIHAHNLENIAFTG-KGIFDG 171
Query: 175 QGEPW------------WIKY-----------------------------------RKKQ 187
G+ W W K RK+
Sbjct: 172 NGDAWRPVKKSKLTESQWKKLVNSGGVLSDDGQIWYPSEKSKAGDSRDNFNVPDLERKED 231
Query: 188 FNVTRPYLIEVMFS----DNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNT 243
F + +L VM S V + T +SP+WN+HP+ +V I+ LT+R P S N
Sbjct: 232 FEKIKDFLRPVMVSIKECKRVLLDGPTFQNSPAWNIHPLLCEDVTIRNLTVRNPWYSQNG 291
Query: 244 DGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAI 303
DG++ +SC N I +N GDD + KSG DE G K +PT++++++ +
Sbjct: 292 DGLDLESCKNVVIYNNSFDVGDDAICFKSGKDEDGRKRAVPTENVVVKNNVVYH-GHGGF 350
Query: 304 ALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+GSEMSGG+++V + T I T G+R K+ GRG V+ IY+ + M
Sbjct: 351 VIGSEMSGGVRNVHVSNCTFIGTDVGLRFKSTRGRGGVVENIYISNIDM 399
>gi|336429336|ref|ZP_08609303.1| hypothetical protein HMPREF0994_05309 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336002947|gb|EGN33044.1| hypothetical protein HMPREF0994_05309 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 521
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 165/350 (47%), Gaps = 26/350 (7%)
Query: 49 ALNCRKHSAVLT--DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSF 106
+ + + +AVL DFG G+G+ +T AI A ++++PPGK+ S
Sbjct: 73 SFHTKLETAVLNVRDFGASGEGERDDTVFIQAAI-----MACPPEGRVVIPPGKYRVTSL 127
Query: 107 NLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRD---------EPGGRFSSLIFG 157
L S+ L + + A+L+ P+LP L S G+G + E +++L G
Sbjct: 128 FLKSNSNLELEEGAVLIYDGRPGRLPILPGLLS-GKGENSLALGSWEGEAADMYAALFTG 186
Query: 158 TNLTDVVVTGGNATINGQG-EPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPS 216
+V + G + G E WW + +Q + RP ++ + ++++ L PS
Sbjct: 187 CGAENVNLYGKGEILGGASMEDWWSE-ENRQSSPHRPRMLFLTHCKHIRVQGLRFSMCPS 245
Query: 217 WNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDE 276
W +HP + S++ I + I P DSPNTDGINP+SC + I + GDDC+A+KSG
Sbjct: 246 WCIHPCFCSDLGIYDVEIINPEDSPNTDGINPESCEHVEIAGCHFSLGDDCIAIKSGKGR 305
Query: 277 YGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAV 336
+ +P H+ IR+ + + +GSE+S G+ V D NT G+RIKT
Sbjct: 306 RAQENPVPGSHIQIRQCF-MENGHGGVTIGSEISSGVHHVTVRDCCFRNTDRGLRIKTRR 364
Query: 337 GRG--AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFD----PKALPT 380
GRG V + + M+ + F + Y PD D +ALP
Sbjct: 365 GRGKSCVVDAVLFENIHMEQVDTPFVLNCFYFCEPDGRSDYVQTKEALPA 414
>gi|326797927|ref|YP_004315746.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548691|gb|ADZ77076.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 455
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 197/415 (47%), Gaps = 54/415 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+TD+G + +T+ +KA TAI K GG +++P G+WLTG +L S+ L++ K
Sbjct: 55 ITDYGALQGNQTATSKAITTAIEKAHKL---GGGIVVIPAGEWLTGKIHLKSNVNLHLDK 111
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
ALLL S++ +++ LP + S G + +S LI+ ++ +TG I + +
Sbjct: 112 GALLLFSENPADY--LPAVHSSWEGME--CYNYSPLIYAYECKNIAITG-QGEIKAKMDV 166
Query: 179 W--W-------IKYRKKQFNVT------------------RPYLIEVMFSDNVQISNLTL 211
W W ++ K+ +N+ RP I+ S+NV + +++
Sbjct: 167 WETWFTRPKPHMESIKRLYNLASAYTPLEQRQMVNDTAHLRPQFIQFNRSENVLLEGISI 226
Query: 212 IDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVK 271
+SP W +H S N++I+ L + A N DG++P+ N IE+ GDD +A+K
Sbjct: 227 TNSPFWTIHTYLSKNIIIRNLNVYA--HGHNNDGVDPEMSQNVLIENCVFDQGDDAIAIK 284
Query: 272 SGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN---TQS 328
SG + G ++ P++++IIR + IA+GSE+SGGI++V + ++
Sbjct: 285 SGRNPEGWRLKAPSKNIIIRNC-TVKNGHQLIAIGSELSGGIENVFVDSCVVMDGAKLNH 343
Query: 329 GVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKAL-PTV------ 381
+ IKT G YV+ IY + ++ G G D + + L PTV
Sbjct: 344 LLFIKTNERMGGYVRNIYASNLQAGRIEL-----GILGIETDVLYQWRNLVPTVERRLTP 398
Query: 382 -TGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQ 435
+ ++ A NV +++ G + P I + NV K E+ K + N N Q
Sbjct: 399 IKDVYLNNVTAKNVQFVSRILGQKELPIENIVLKNVEGKTVEEEKHIHENVLNFQ 453
>gi|317475267|ref|ZP_07934533.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
gi|316908521|gb|EFV30209.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
Length = 533
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 190/427 (44%), Gaps = 77/427 (18%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ FG GDG T NTKA N AI ++ A GG ++++P G WLTG L S+ LY K
Sbjct: 60 ILQFGAKGDGITLNTKAINDAIKAVN---AKGGGKVVIPEGLWLTGPIELLSNVNLYTEK 116
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+AL++ S D + +P+L R R S I N ++ +TG +G G+
Sbjct: 117 NALIVFSDDFNAYPILETSFEGLNTR-----RCQSPISARNAENIAITG-YGVFDGSGDS 170
Query: 179 W------------WIKYRK-----------------------KQFNV------------- 190
W W K K+FN
Sbjct: 171 WRPVKKGKLTAGQWDALVKSGGVVDKSIWYPTAGSLKGALACKEFNNPEGIETEEEWNEI 230
Query: 191 ---TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGIN 247
RP L+ ++ S V + +T +SPSW +HP+ ++ I + + P S N D ++
Sbjct: 231 RPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQNGDALD 290
Query: 248 PDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGS 307
+SC N I +N +GDD + +KSG D+ G + G P Q++I++ + +GS
Sbjct: 291 LESCKNALIINNIFDAGDDAICIKSGKDKDGRERGEPCQNVIVKNNTVLH-GHGGFVVGS 349
Query: 308 EMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY------VFWM 361
EMSGG+K++ D T + T G+R K+ GRG V+ IY+ + M + + +F+
Sbjct: 350 EMSGGVKNIYVADCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHMIDIPHEPLLFDLFYG 409
Query: 362 TGDYGSHPDPGFDPK---ALP--TVTGINYRDMVADNVT-----QSAKLDGIRNDPFTGI 411
G + + ++P TV ++RD+ N+ ++ +G+ P +
Sbjct: 410 GKAAGEETEEDLKSRMKASIPEVTVETPSFRDIHISNIICKGSGRAMFFNGLPEMPIRNV 469
Query: 412 CISNVTI 418
+ NV I
Sbjct: 470 TVKNVII 476
>gi|329956221|ref|ZP_08296901.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328524695|gb|EGF51756.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 506
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 164/345 (47%), Gaps = 61/345 (17%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L +F VG+G+T T AF AI+ LS+ GG L+VP G WLTG L S+ L++ K
Sbjct: 52 LAEFNAVGNGETLCTSAFADAINTLSE---QGGGHLVVPAGVWLTGPIVLKSNIDLHLEK 108
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A++L S D +PL+ + G D R S I G NL +V +TG A I+G G
Sbjct: 109 GAVILFSPDVDLYPLVE---TVFEGLDTR--RCQSPISGRNLENVAITGEGA-IDGNGHY 162
Query: 179 W----------------------------WIKY-------------------RKKQFNVT 191
W W Y ++++
Sbjct: 163 WRPLKREKVTESVWKQTTARGGVYKRPTYWFPYPETLKGDTISNMNVPQNLQTEEEWQSV 222
Query: 192 RPYLIEVMFS----DNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGIN 247
R +L VM S NV + + +SP+WN+HP+ NVL++ + +R P + N DG++
Sbjct: 223 RHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLVEDVQVRNPSYAQNGDGLD 282
Query: 248 PDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGS 307
+SC N I ++ GDD + +KSG DE G + P +++++ + +GS
Sbjct: 283 LESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCT-VFKGHGGFVVGS 341
Query: 308 EMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
EMSGG+++V + + T G+R K+ GRG V+ I++ ++M
Sbjct: 342 EMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWITNVSM 386
>gi|218129299|ref|ZP_03458103.1| hypothetical protein BACEGG_00876 [Bacteroides eggerthii DSM 20697]
gi|217988476|gb|EEC54797.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 533
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 188/427 (44%), Gaps = 77/427 (18%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ FG GDG T NTKA N AI ++ A GG ++++P G WLTG L S+ LY K
Sbjct: 60 ILQFGAKGDGITLNTKAINDAIKAVN---AKGGGKVVIPEGLWLTGPIELLSNVNLYTEK 116
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+AL++ S D + +P+L R R S I N ++ +TG +G G+
Sbjct: 117 NALIVFSDDFNAYPILETSFEGLNTR-----RCQSPISARNAENIAITG-YGVFDGSGDS 170
Query: 179 W------------WIKYRK-----------------------KQFNV------------- 190
W W K K+FN
Sbjct: 171 WRPVKKGKLTAGQWDALVKSGGVVDKSIWYPTAGSLKGALACKEFNNPEGIETEEEWNEI 230
Query: 191 ---TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGIN 247
RP L+ ++ S V + +T +SPSW +HP+ ++ I + + P S N D ++
Sbjct: 231 RPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQNGDALD 290
Query: 248 PDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGS 307
+SC N I +N +GDD + +KSG D+ G + G P Q++I++ + +GS
Sbjct: 291 LESCKNALIINNIFDAGDDAICIKSGKDKDGRERGEPCQNVIVKNNTVLH-GHGGFVVGS 349
Query: 308 EMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY------VFWM 361
EMSGG+K++ D T + T G+R K+ GRG V+ IY+ + M + + +F+
Sbjct: 350 EMSGGVKNIYVADCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHMIDIPHEPLLFDLFYG 409
Query: 362 TGDYGSHPDPGFDPK---ALPTVT-------GINYRDMVADNVTQSAKLDGIRNDPFTGI 411
G + + ++P VT I+ +++ ++ +G+ P +
Sbjct: 410 GKAAGEETEEDLKSRMKASIPEVTVETPSFRNIHISNIICKGSGRAMFFNGLPEMPIRNV 469
Query: 412 CISNVTI 418
+ NV I
Sbjct: 470 TVKNVII 476
>gi|337746270|ref|YP_004640432.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
gi|336297459|gb|AEI40562.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
Length = 475
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 184/387 (47%), Gaps = 44/387 (11%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+T+FG V DG+T NT+A AI A G +++VP G ++TG+ L S TLYI +
Sbjct: 60 ITEFGAVADGQTINTEAIQAAID-----ACTAGGKVVVPKGTFVTGAIFLKSRMTLYIEQ 114
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIF----GTNLTDVVVTGGNATING 174
+LL S + ++P++ GR++ ++SLI + ++ G I+
Sbjct: 115 GGVLLGSDNPDDYPVMQ---YRWEGREQLC--YASLINTKDPAEGRLEQIIIEGEGKIDA 169
Query: 175 QGEPWWIK--YRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
G + K KK F R + + D V + ++T+ SP+W VH +Y + V + +
Sbjct: 170 NGMALFHKEMAEKKGF---RGRAVCLRNVDGVYLKDITVRQSPAWCVHLIYCNGVSVNHI 226
Query: 233 TIRAPIDSP--------NTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMP 284
I D N DG+NPDS ++ I ++ I S DDC+A+KSG +E G +VG+P
Sbjct: 227 EIHTKKDEQGRRYEHIFNGDGLNPDSTSDVYIFNSMIASQDDCIAIKSGRNEEGRRVGIP 286
Query: 285 TQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKE 344
+Q++ I C +A GSEMSGG+++VR D + S IK GRGA ++
Sbjct: 287 SQNIRISN--CTFKSGFGVATGSEMSGGVRNVRISDCRFEDVYSIATIKAPRGRGAVIEN 344
Query: 345 IYVRRMTMKTMKYVF----WMTG-----DYGSHPDPGFDP-----KALPTVTGINYRDMV 390
+ V T+ W G + SH D D + + I+ +++V
Sbjct: 345 VTVEDCTLTNYSLEHEDCRWFRGAINIDQFYSHADFDADKVEEVDEGTSVIRNIHLKNIV 404
Query: 391 AD-NVTQSAKLDGIRNDPFTGICISNV 416
D + + + G+ P I + NV
Sbjct: 405 LDTHAGNAVFMAGLPESPLQNIRLENV 431
>gi|59044767|gb|AAW84066.1| pectate lyase [uncultured bacterium]
Length = 471
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 172/338 (50%), Gaps = 51/338 (15%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
LT+FG GDG+T T AF AI + GG +++VPPG +LTG+ +L S+ L+I +
Sbjct: 57 LTEFGAKGDGRTDCTLAFRRAIDRCTNA---GGGRVVVPPGSYLTGAIHLKSNVDLHISE 113
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG-- 176
+ SQ+ ++ LP + S G + +S I+ T++ +TG T+NGQ
Sbjct: 114 GTTVKFSQNPKDY--LPVVFSRWEGVEV--FNYSPFIYAFEQTNIAITG-KGTLNGQSDN 168
Query: 177 EPWW-------------------------------IKYRKKQF---NVTRPYLIEVMFSD 202
E WW + +++ F + RP I+ +
Sbjct: 169 EHWWPWNGRAAYGWKEGMSNQRPDRNALFAMAEKGVPVQERIFGEGHYLRPQFIQPYRCE 228
Query: 203 NVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIV 262
NV I +T+ +SP W +HPV NV++Q + I + PN DG NP+SCT+ I+D
Sbjct: 229 NVLIEGVTIRNSPMWEIHPVLCRNVIVQNVIINS--HGPNNDGCNPESCTDVLIKDCDFD 286
Query: 263 SGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRAED- 320
+GDDC+A+KSG + G ++ PT+++I+ C D I +GSE+SGG++++ A +
Sbjct: 287 TGDDCIAIKSGRNADGRRLKAPTENIIVTG--CRMKDGHGGITVGSEISGGVRNLFASNC 344
Query: 321 -ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
+ + N +R+K RG ++ ++ R + + + +
Sbjct: 345 RLDSPNLDHALRVKNNAMRGGLLENLHFRNIDVGQVAH 382
>gi|339499261|ref|YP_004697296.1| polygalacturonase [Spirochaeta caldaria DSM 7334]
gi|338833610|gb|AEJ18788.1| Polygalacturonase [Spirochaeta caldaria DSM 7334]
Length = 467
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 173/384 (45%), Gaps = 51/384 (13%)
Query: 81 SNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSY 140
S + K + GG L + G + +G L S+ LYI ++A L + D S + P +
Sbjct: 26 SAIKKLTSVGGGILKLTSGVFFSGPLQLYSNIHLYIEENATLTFNADFSLYK-----PVW 80
Query: 141 GRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW-------------------- 180
R LIF + ++ + G+ I+G GEPWW
Sbjct: 81 TRWEGVECWAMHPLIFASKAENITI-AGSGHIDGNGEPWWNSLWQAKAEKRTHPKYPYEL 139
Query: 181 ------IKYRK-------KQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNV 227
YR ++ RP LI+ + N+ + N+TL +SP WN H + S+
Sbjct: 140 QLADLNKDYRNQPSGGGGRELQFLRPPLIQFLNCKNITLQNVTLQNSPFWNTHFAFCSDC 199
Query: 228 LIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQH 287
I G+ P ++PNTDG+N DSC++ I++ GDDC+ +KSG E GI++ PT++
Sbjct: 200 TITGVHFINPKEAPNTDGLNIDSCSSITIQNCTFDVGDDCLGLKSGSGEDGIRINRPTEN 259
Query: 288 LIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYV 347
++I + + +GSE +GGI +++ + + T G+RIKT GRG ++ I +
Sbjct: 260 ILIDSCT-MKNGHGGVVIGSETAGGINNIKITNCSMEETDRGLRIKTRRGRGGVIENIRL 318
Query: 348 RRMTMKTMKYVFWMTGDYG------SHPDPGFDPKAL----PTVTGINYRDMVADNVTQS 397
MK + + YG S P DP+ L P + I ++A++ +
Sbjct: 319 EHCYMKNILCPLVVNCYYGPGGPKSSSPIFSLDPQPLSATTPKIQNIYISHLIAEHCRAA 378
Query: 398 AK-LDGIRNDPFTGICISNVTIKL 420
A + G+ P + IS L
Sbjct: 379 AAFIVGLPEQPIKNLYISECKFIL 402
>gi|383150861|gb|AFG57437.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150863|gb|AFG57438.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150865|gb|AFG57439.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150867|gb|AFG57440.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150869|gb|AFG57441.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150871|gb|AFG57442.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150873|gb|AFG57443.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150875|gb|AFG57444.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150877|gb|AFG57445.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150879|gb|AFG57446.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150881|gb|AFG57447.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150883|gb|AFG57448.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150885|gb|AFG57449.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150887|gb|AFG57450.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150889|gb|AFG57451.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150891|gb|AFG57452.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150893|gb|AFG57453.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
Length = 138
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 95/137 (69%)
Query: 272 SGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVR 331
SGWDEYGI G P+ ++IIRR+I + S+ +ALGSEMSGGIK V A+DI N++ G+R
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGETHTSSGLALGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 332 IKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVA 391
IKTA GRG YVK++Y+ +TMK + TG YG HPD +DP ALP + I ++D++
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 392 DNVTQSAKLDGIRNDPF 408
D + + ++GI+N PF
Sbjct: 121 DEIKTAGSVEGIQNAPF 137
>gi|300770985|ref|ZP_07080862.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300762258|gb|EFK59077.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 481
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 131/472 (27%), Positives = 219/472 (46%), Gaps = 52/472 (11%)
Query: 13 HPHVIKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVL--TDFGGVGDGKT 70
+P V+ + L+ + L+ + + + A N + AV+ DFG DGKT
Sbjct: 7 NPRVLAPKAMLMGILLVFVSFTAFATSDPGWVDKVGARNFKVGKAVVYANDFGAREDGKT 66
Query: 71 SNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESE 130
+TKA AI +K GG ++ PGK+LTGS + S L++ + LL SQ +
Sbjct: 67 ISTKAIQQAIDACAK---KGGGKVQFRPGKYLTGSVFIKSGVFLHVDEGVELLGSQSLED 123
Query: 131 WPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQ--- 187
+P + + G P + + N G INGQG+P+W Y K +
Sbjct: 124 YPQINTRVA-GIEMIWP-----AALVNINGQQKAGISGKGIINGQGKPFWDAYWKLRSEY 177
Query: 188 ----------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAP 237
++ RP + V S+++ I ++TL + W VH +YSS V + G+ I+
Sbjct: 178 DKKGLRWIVDYDAQRPRTVIVDGSEDIIIRDVTLKQAGFWTVHLLYSSYVTVDGIIIKNN 237
Query: 238 IDS--PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLIC 295
I+ P+TDGI+ DS RI++ I DD +KSG D G++V PT++++I I
Sbjct: 238 INGIGPSTDGIDIDSSKWIRIQNADIDCNDDNFCIKSGRDWDGLRVNRPTEYVLITDCIS 297
Query: 296 ISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTM 355
D I GSE SGG++ + A ++ A T+ G+R+K+A RG V++I + + M ++
Sbjct: 298 RKGD-GLITFGSETSGGMRHIIARNLKAHGTKVGIRLKSARNRGGVVEDILLENIQMDSV 356
Query: 356 KYVFWMTGDYG-----SHPDPGFD------------------PKALPTVTGINYRDMVAD 392
+ F +T ++ S G+D K +PT I +++
Sbjct: 357 RTAFEVTPNWNPSYSYSKLPAGYDINKVPEHWKKMVTPVEPASKGIPTFQNIQIKNVFVK 416
Query: 393 NVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQ 444
++ +DG++ +P + NV I T K + + N Q +VT Q
Sbjct: 417 FAQRAINVDGLQENPLQKFSLENVAI--TAKTAGVIRHAKNWQLKNVKVTAQ 466
>gi|325842985|ref|ZP_08167837.1| polygalacturonase (pectinase) [Turicibacter sp. HGF1]
gi|325489511|gb|EGC91879.1| polygalacturonase (pectinase) [Turicibacter sp. HGF1]
Length = 415
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 147/289 (50%), Gaps = 12/289 (4%)
Query: 92 AQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPS--------YGRG 143
+ +P G + T + L S+ TL + K A LL S +LP G
Sbjct: 3 GEFFIPKGTYATKTIFLKSNLTLELEKGATLLYSASFESGAILPGYTKNSNHEEYYLGSW 62
Query: 144 RDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDN 203
P F++LI G N+++V + G ++G G W + K + RP L +++ S +
Sbjct: 63 EGNPLDTFTALIQGVNVSNVNLIG-EGVLDGNGSIGWWDFPKVRNVAWRPRLFQIIHSHH 121
Query: 204 VQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVS 263
V + +TL +SPSW VHP++S ++ L I P DSPNTDG++P+SC I +
Sbjct: 122 VNVQGITLQNSPSWTVHPLFSDDLKFIDLKIINPKDSPNTDGLDPESCHRVLILGVHFSV 181
Query: 264 GDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITA 323
GDDC+A+KSG G ++ ++++ IR ++ A+ +GSEM+GG+K + E
Sbjct: 182 GDDCIAIKSGKIYLGSRLKRASEYITIRNC-SMNFGHGAVVIGSEMAGGVKHILVEQCLF 240
Query: 324 INTQSGVRIKTAVGRG--AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPD 370
T G+RIKT GRG A V+++ R + M+ + + Y PD
Sbjct: 241 NETDRGLRIKTRRGRGEAAIVEDVTFRHIEMEKVLTPLVVNCFYFCDPD 289
>gi|386820345|ref|ZP_10107561.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386425451|gb|EIJ39281.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 514
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 201/392 (51%), Gaps = 43/392 (10%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFGG+GDGKT NT+A AI K A +GG + PG +L+GS + + I K
Sbjct: 85 VNDFGGIGDGKTINTEAIQKAID---KCAENGGGTIAFKPGTYLSGSIFIKKNIHFKIGK 141
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+ +L SQD +++ + + G P ++LI +N +V++ G I+GQG+
Sbjct: 142 NVTILGSQDINDYKEIDTRVA-GIEMKWP----AALINVSNQENVIIDG-EGLIDGQGKV 195
Query: 179 WWIKY---RKKQF-----------NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYS 224
+W Y RK ++ + RP I + S N+ + +L + + W VH +YS
Sbjct: 196 FWDYYWDLRKNEYEPKGLRWIVDYDAKRPRTILISDSKNIALKDLNIQKAGFWTVHVLYS 255
Query: 225 SNVLIQGLTIRAPI--DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVG 282
+ + GL I+ I P+TDGI+ DS I++ I DD +K+G D G +V
Sbjct: 256 EKITVDGLIIKNNIGGHGPSTDGIDIDSSKWVLIQNCDIDCNDDNFCLKAGRDWDGQRVN 315
Query: 283 MPTQHLIIRRLICISPDSAAI-ALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAY 341
PT++++IR CI+ A + LGSE +G I+ V +I + T +G+ IK+A+ RG
Sbjct: 316 RPTEYVVIRN--CIARKGAGLFTLGSETAGSIRHVYVSNIKGLGTSNGLNIKSALTRGGT 373
Query: 342 VKEIYVRRMTMKTMKYVFWMTGDYG-----SHPDPGFDPKALPTVTGINYRDMVADNVTQ 396
V++I ++ + M ++K ++ ++ S G+D ++P I+++ ++ + V
Sbjct: 374 VEDISLQNIQMDSVKTFVKISMNWNPSYSYSKLPEGYDIDSIP----IHWKKLLKE-VPA 428
Query: 397 SAKLDGIRNDPFTGICISNVTIKLTEKPKELQ 428
S + +N I +SN+ +K EK ++
Sbjct: 429 SKGIPTFKN-----ISLSNIDVKGAEKAMNVK 455
>gi|427387085|ref|ZP_18883141.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
gi|425725690|gb|EKU88559.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
Length = 534
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 161/351 (45%), Gaps = 63/351 (17%)
Query: 55 HSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTL 114
++ + +FG GDG NTKA N AI ++ A GG ++++P G WLTG L S+ L
Sbjct: 56 YTVSIVEFGAKGDGIMLNTKAINDAIKAVN---AKGGGKVVIPEGLWLTGPIELLSNVNL 112
Query: 115 YIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATING 174
Y +AL+L + D +P++ + G D R S I N ++ +TG + +G
Sbjct: 113 YTEMNALILFTDDFEAYPIIK---TSFEGLDTR--RCQSPISAWNAENIAITG-HGVFDG 166
Query: 175 QGEPW------------WIKYRK-------------------------KQFN-------- 189
G+ W W K K FN
Sbjct: 167 SGDSWRPVKKGKLTSGQWSSLVKSGGVVDESGSIWYPTAGALKGAMATKDFNNPEGIETD 226
Query: 190 --------VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSP 241
RP L+ ++ S V + +T +SPSW +HP+ ++ I + + P S
Sbjct: 227 EEWNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITIHNVKVFNPWYSQ 286
Query: 242 NTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSA 301
N D ++ +SC N I +N +GDD + +KSG DE G + G P Q++I++ +
Sbjct: 287 NGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLH-GHG 345
Query: 302 AIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+GSEMSGG+K+V D T + T G+R K+ GRG V+ IY+ + M
Sbjct: 346 GFVVGSEMSGGVKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNINM 396
>gi|386722797|ref|YP_006189123.1| hypothetical protein B2K_11610 [Paenibacillus mucilaginosus K02]
gi|384089922|gb|AFH61358.1| hypothetical protein B2K_11610 [Paenibacillus mucilaginosus K02]
Length = 518
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 184/387 (47%), Gaps = 44/387 (11%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+T+FG V DG+T NT+A AI A G +++VP G ++TG+ L S TLY+ +
Sbjct: 103 ITEFGAVADGQTLNTEAIQAAID-----ACTAGGKVVVPKGTFVTGAIFLKSRMTLYVEQ 157
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIF----GTNLTDVVVTGGNATING 174
+LL S + ++P++ GR++ ++SLI + ++ G I+
Sbjct: 158 GGVLLGSDNPDDYPVMQ---YRWEGREQLC--YASLINTKDPAEGRLEQIIIEGEGKIDA 212
Query: 175 QGEPWWIK--YRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
G + K KK F R + + D V + ++T+ SP+W VH +Y + V + +
Sbjct: 213 NGMALFHKEMAEKKGF---RGRAVCLRNVDGVYLKDITVRQSPAWCVHLIYCNGVSVNHI 269
Query: 233 TIRAPIDSP--------NTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMP 284
I D N DG+NPDS ++ I ++ I S DDC+A+KSG +E G +VG+P
Sbjct: 270 EIHTKKDEHGRRYEHIFNGDGLNPDSTSDVYIFNSMIASQDDCIAIKSGRNEEGRRVGIP 329
Query: 285 TQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKE 344
+Q++ I C +A GSEMSGG+++VR D + S IK GRGA ++
Sbjct: 330 SQNIRISN--CTFKSGFGVATGSEMSGGVRNVRISDCRFEDVYSIATIKAPRGRGAVIEN 387
Query: 345 IYVRRMTMKTMKYVF----WMTG-----DYGSHPDPGFDP-----KALPTVTGINYRDMV 390
+ V T+ W G + SH D D + + I+ +++V
Sbjct: 388 VTVEDCTLTNYSLEHEDCRWFRGAINIDQFYSHADFDADKVEEVDEGTSVIRNIHLKNIV 447
Query: 391 AD-NVTQSAKLDGIRNDPFTGICISNV 416
D + + + G+ P I + NV
Sbjct: 448 LDTHAGNAVFMAGLPESPLQNIRLENV 474
>gi|315499125|ref|YP_004087929.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315417137|gb|ADU13778.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 512
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 181/392 (46%), Gaps = 40/392 (10%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
FG GDG + +T A A+ A G + + G++L+ L S + + + A
Sbjct: 83 FGAKGDGVSDDTAALQAAL-----MACPPGGLVRLEAGRYLSAPLFLKSDMAVELCEGAH 137
Query: 122 LLASQDESEWPLLPP------------LPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGN 169
+L +D ++WP+LP L S+ D +L+F N V G
Sbjct: 138 ILGHRDITKWPVLPGVLPDAEGVKHTCLGSWEGEADACHAGLFNLLFAQN----VQIYGR 193
Query: 170 ATINGQG--EPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNV 227
++ Q + WW + K +F RP LI ++ + V + +TL +SPSW VHP++S +
Sbjct: 194 GVMDAQAGFDTWW-ERPKARFIGWRPRLIFMVECEQVILQGMTLKNSPSWTVHPLFSRGL 252
Query: 228 LIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQH 287
L I AP DSPNTDG+NP+S T+ I GDDC+A+KSG + PT+
Sbjct: 253 TFVDLRIEAPADSPNTDGLNPESSTDIVISGVDFAVGDDCIALKSGKISMARRSVRPTRR 312
Query: 288 LIIRRLICISPDS-AAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG--AYVKE 344
+ I C D A+ +GSEM+ G+ D+ + INT G+R+KT GRG A ++
Sbjct: 313 VRISN--CRMKDGHGAVVIGSEMACGVYDISVQTCLFINTDRGIRLKTRRGRGREAVIRG 370
Query: 345 IYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKA----------LPTVTGINYRDMVADNV 394
+ R + M+ + F + Y PD D A P++ I + A V
Sbjct: 371 LNCRHIRMEGVGSAFVINSFYWCDPDGKTDEVADRNPRPVDEGTPSIGDIRLSHIDAIGV 430
Query: 395 TQSA-KLDGIRNDPFTGICISNVTIKLTEKPK 425
+ + G+ P G+ + ++ ++ + K
Sbjct: 431 RHAGLYVLGLPEQPVDGLTLDHIRLRFDPQAK 462
>gi|325106423|ref|YP_004276077.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975271|gb|ADY54255.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 482
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 204/443 (46%), Gaps = 63/443 (14%)
Query: 25 TLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLS 84
T G +S A T +S A +K +TD+G D +T+A AI
Sbjct: 23 TKGKISSADANAWKTADSIRKLIVAPTFKKVDYKITDYGASLDSTVKSTEAIRKAIEACH 82
Query: 85 KYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEW-PLLPPLPSYGRG 143
+GG ++IVP G +L+G +L S+ L++ A +L S+D +++ PL+ + R
Sbjct: 83 ---TNGGGRVIVPKGTFLSGPIHLKSNVNLHLEDGAKILFSRDVNDYKPLV-----FSRW 134
Query: 144 RDEPGGRFSSLIFGTNLTDVVVTG-GNATINGQGEPWWIKYRKKQF-------------- 188
+S LI+ ++ +TG G N E WW KK++
Sbjct: 135 EGMECMNYSPLIYAYEQENIAITGNGILDGNANNEYWWPWKAKKEYGWKEGIPNQLAAVK 194
Query: 189 --------------------NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
+ RP I+ S NV I+++ +I++P WN++PV NV
Sbjct: 195 ILTQQVKDLVPARERIHGDGSYLRPPFIQPYLSKNVLIADVKIINAPFWNINPVLCENVT 254
Query: 229 IQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHL 288
++ ++ PN DG +P+SC N I Y +GDDC+A+KSG +E G + P ++
Sbjct: 255 VR--NVKVVTHGPNNDGCDPESCKNVLITGCYFDTGDDCIAIKSGRNEDGRNIARPAENH 312
Query: 289 IIRRLICISPDS-AAIALGSEMSGGIKDVRAEDIT--AINTQSGVRIKTAVGRGAYVKEI 345
II C D + +GSE+SGG +++ A+++ + N +R+KT+ RG ++ +
Sbjct: 313 IIEN--CEMKDGHGGVVIGSEISGGARNIFAQNLIMDSPNLDRILRLKTSSLRGGIIENV 370
Query: 346 YVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAK----LD 401
Y+R + + T K + + + PG LPT+ I+ ++ N+ Q K ++
Sbjct: 371 YMRNVEVGTYKEAAILCDMF--YEKPG---DFLPTIRNISVENL---NIKQGGKFGVLIN 422
Query: 402 GIRNDPFTGICISNVTIKLTEKP 424
+ P + ISN TI + P
Sbjct: 423 AYKESPVENLRISNSTINGVKIP 445
>gi|325106104|ref|YP_004275758.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974952|gb|ADY53936.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 1277
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 208/435 (47%), Gaps = 45/435 (10%)
Query: 23 LLTLGLLSPQVAECRPTKNSYTIEFQ----ALNCRKHSAVLTDFGGVGDGKTSNTKAFNT 78
LL + LL+ +A T Y E + A + + FG + A NT
Sbjct: 11 LLFIMLLAIPIAGFTQTGWDYVKEIEKNIKAPTFANRNYNILHFGAQKGAVKDSRPAINT 70
Query: 79 AISNLSKYAADGGAQLIVPPGKW-LTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPL 137
AI+ S +GG Q+ VPPGK+ + G S+ LY+ + A L+ S DE ++ LP +
Sbjct: 71 AITKCSD---EGGGQVTVPPGKYFIKGPIIFKSNVNLYLSEGAELIFSHDEKDY--LPAV 125
Query: 138 PSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP----WWIKYRKKQFNVT-- 191
+ G + +S LI+ + ++ +TG +NGQG W + +K Q +
Sbjct: 126 LTRWEGTEVFN--YSPLIYAYQVENIAITG-KGILNGQGSKNIANWKPEQKKDQALIRKM 182
Query: 192 ------------------RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLT 233
RP IE + N+ I + +ID+ W +HP+ +NV ++ ++
Sbjct: 183 GREGAPVYNRLFGEKHKLRPAFIEPLNCRNILIEGVRIIDATFWVIHPIGCNNVTVRNVS 242
Query: 234 IRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRL 293
I + + N+DG +P+S TN +E+ + +GDD +A+KSG D+ G ++G PT+++I+R
Sbjct: 243 IDSF--NANSDGFDPESTTNALVENCHFRTGDDGIAIKSGRDQDGWRIGQPTENIIVRNS 300
Query: 294 ICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMK 353
S ++ + +GSE+SGG+++V E+I + + K+ + RG Y++ ++R + M
Sbjct: 301 TFESL-ASGVCIGSEISGGVRNVFIENIKIPKASNAIYFKSNLDRGGYMENTWIRNVNMD 359
Query: 354 TMKYVFWMTGDYGSHPDPGFDPKALP-TVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
++ DY S + + T+ IN A +++G ++ P T +
Sbjct: 360 SVGTAIRFDPDYKSESKENYATRFNNFTIENIN----CAYASRSGIEVNGFKDMPITNVA 415
Query: 413 ISNVTIKLTEKPKEL 427
+ NV I T E+
Sbjct: 416 LKNVRITKTPVSHEI 430
>gi|302671860|ref|YP_003831820.1| polygalacturonase Pgl28A [Butyrivibrio proteoclasticus B316]
gi|302396333|gb|ADL35238.1| polygalacturonase Pgl28A [Butyrivibrio proteoclasticus B316]
Length = 524
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 167/342 (48%), Gaps = 23/342 (6%)
Query: 44 TIEFQALNCRKHSAVL--TDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKW 101
T+E + S +L T FG GDG T +T A AI K DG L P G++
Sbjct: 66 TVETRNFTTGHESYLLDVTAFGAKGDGVTMDTAAIQAAICACPK---DGTVYL--PKGEY 120
Query: 102 LTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLP---------SYGRGRDEPGGRFS 152
L L S TL++ K A++L D + +P+LP + + G P ++
Sbjct: 121 LVTPLFLKSDMTLWLDKGAVILGDTDRNHYPVLPGMTRATDEKSEYNLGTWEGNPLNCYA 180
Query: 153 SLIFGTNLTDVVVTG-GNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTL 211
SLI + ++ + G G N WW+ + K+ RP+ + ++ V++ N+ +
Sbjct: 181 SLITAIDAQNLDIIGPGTIDGNAGNSDWWVNAKVKR-GAWRPFAMYLVRCQKVRVQNVRV 239
Query: 212 IDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVK 271
+SP W VHP YS ++ L I P DSPNTDG++P+SC N + I GDDC+A+K
Sbjct: 240 QNSPCWTVHPYYSDDLAFLNLYIHNPSDSPNTDGLDPESCKNVLVAGTTISVGDDCMAIK 299
Query: 272 SGWDEYGIKVGMPTQHLIIRRLIC-ISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGV 330
SG ++ T+++IIR C ++ +GSE++GG+K+VR T G+
Sbjct: 300 SGKFYMSMEHHKVTENIIIRN--CRFERGHGSVTVGSEVAGGVKNVRVTQCIFDGTDRGL 357
Query: 331 RIKTAVGRG--AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPD 370
RIKT GRG + + +I + M + F + Y PD
Sbjct: 358 RIKTRRGRGERSVLDDILFENIDMNGVHMPFTVNMFYFCDPD 399
>gi|361068129|gb|AEW08376.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
Length = 138
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 95/137 (69%)
Query: 272 SGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVR 331
SGWDEYGI G P+ ++IIRR+I + S+ ++LGSEMSGGIK V A+DI N++ G+R
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLSLGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 332 IKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVA 391
IKTA GRG YVK++Y+ +TMK + TG YG HPD +DP ALP + I ++D++
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 392 DNVTQSAKLDGIRNDPF 408
D + + ++GI+N PF
Sbjct: 121 DEIKTAGSVEGIQNAPF 137
>gi|376338086|gb|AFB33588.1| hypothetical protein 2_7803_01, partial [Pinus mugo]
Length = 138
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 94/137 (68%)
Query: 272 SGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVR 331
SGWDEYGI G P+ ++IIRR+I + S+ +ALGSEMSGGIK V A+DI N++ G+R
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGETHTSSGLALGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 332 IKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVA 391
IKTA GRG YVK++Y+ +TMK + TG YG HPD +DP ALP + I ++D++
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 392 DNVTQSAKLDGIRNDPF 408
D + + + GI+N PF
Sbjct: 121 DEIKTAGSVXGIQNAPF 137
>gi|380693930|ref|ZP_09858789.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 528
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 158/338 (46%), Gaps = 63/338 (18%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
++ FG GDG T NTKA N AI +++ GG ++I+P G WLTG L S+ LY +
Sbjct: 51 ISKFGAKGDGMTLNTKAINDAIKEVNQR---GGGKVIIPEGTWLTGPIELLSNVNLYTER 107
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+AL+L + D +P++P + G D R S I + ++ +TG +G G+
Sbjct: 108 NALVLFTGDFEAYPIIP---TSFEGLDTR--RCQSPISARDAENIAITG-YGIFDGNGDC 161
Query: 179 W------------WIKYRK-------------------------KQFNV----------- 190
W W K K K FNV
Sbjct: 162 WRPVKKEKLTASQWNKLVKSGGVLDAQERIWYPTAGSLKGAMACKDFNVPEGINTDEEWN 221
Query: 191 -----TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
RP L+ + S V + +T +SPSW +HP+ ++ + + + P S N D
Sbjct: 222 EIRAWLRPVLLSFVKSKKVLLEGVTFKNSPSWCLHPLSCEDITVNNIQVINPWYSQNGDA 281
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
++ +SC N I ++ +GDD + +KSG DE G + G P Q++I++ + +
Sbjct: 282 LDLESCKNALIINSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLH-GHGGFVV 340
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVK 343
GSEMSGG+K++ ED T + T G+R K+ GRG V+
Sbjct: 341 GSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 378
>gi|383120529|ref|ZP_09941257.1| hypothetical protein BSIG_2461 [Bacteroides sp. 1_1_6]
gi|382985024|gb|EES68500.2| hypothetical protein BSIG_2461 [Bacteroides sp. 1_1_6]
Length = 535
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 155/338 (45%), Gaps = 63/338 (18%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
++ FG GDG T NTKA N AI +++ GG ++I+P G WLTG L S+ LY +
Sbjct: 58 ISKFGAKGDGMTLNTKAINDAIKEVNQR---GGGKVIIPEGTWLTGPIELLSNVNLYTER 114
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+AL+L + D +P++P R R S I N ++ +TG +G G+
Sbjct: 115 NALILFTGDFEAYPIIPTSFEGLETR-----RCQSPISARNAENIAITG-YGIFDGNGDC 168
Query: 179 W------------WIKYRK-------------------------KQFNV----------- 190
W W K K K FNV
Sbjct: 169 WRPVKKEKLTASQWNKLVKSGGVLDEQERIWYPTAGSLKGAMACKDFNVPEGINTDEEWN 228
Query: 191 -----TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
RP L+ + S + + +T +SPSW +HP+ + + + + P S N D
Sbjct: 229 EIRAWLRPVLLNFVKSKRILLEGVTFKNSPSWCLHPLSCEDFTVNNIQVINPWYSQNGDA 288
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
++ +SC N I ++ +GDD + +KSG DE G + G P Q++I++ + +
Sbjct: 289 LDLESCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLH-GHGGFVV 347
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVK 343
GSEMSGG+K++ ED T + T G+R K+ GRG V+
Sbjct: 348 GSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 385
>gi|298383858|ref|ZP_06993419.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298263462|gb|EFI06325.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 538
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 155/338 (45%), Gaps = 63/338 (18%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
++ FG GDG T NTKA N AI +++ GG ++I+P G WLTG L S+ LY +
Sbjct: 61 ISKFGAKGDGMTLNTKAINDAIKEVNQR---GGGKVIIPEGTWLTGPIELLSNVNLYTER 117
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+AL+L + D +P++P R R S I N ++ +TG +G G+
Sbjct: 118 NALILFTGDFEAYPIIPTSFEGLETR-----RCQSPISARNAENIAITG-YGIFDGNGDC 171
Query: 179 W------------WIKYRK-------------------------KQFNV----------- 190
W W K K K FNV
Sbjct: 172 WRPVKKEKLTASQWNKLVKSGGVLDEQERIWYPTAGSLKGAMACKDFNVPEGINTDEEWN 231
Query: 191 -----TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
RP L+ + S + + +T +SPSW +HP+ + + + + P S N D
Sbjct: 232 EIRAWLRPVLLSFVKSKKILLEGVTFKNSPSWCLHPLSCEDFTVNNIQVINPWYSQNGDA 291
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
++ +SC N I ++ +GDD + +KSG DE G + G P Q++I++ + +
Sbjct: 292 LDLESCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLH-GHGGFVV 350
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVK 343
GSEMSGG+K++ ED T + T G+R K+ GRG V+
Sbjct: 351 GSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 388
>gi|29349595|ref|NP_813098.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341505|gb|AAO79292.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 538
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 155/338 (45%), Gaps = 63/338 (18%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
++ FG GDG T NTKA N AI +++ GG ++I+P G WLTG L S+ LY +
Sbjct: 61 ISKFGAKGDGMTLNTKAINDAIKEVNQR---GGGKVIIPEGTWLTGPIELLSNVNLYTER 117
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+AL+L + D +P++P R R S I N ++ +TG +G G+
Sbjct: 118 NALILFTGDFEAYPIIPTSFEGLETR-----RCQSPISARNAENIAITG-YGIFDGNGDC 171
Query: 179 W------------WIKYRK-------------------------KQFNV----------- 190
W W K K K FNV
Sbjct: 172 WRPVKKEKLTASQWNKLVKSGGVLDEQERIWYPTAGSLKGAMACKDFNVPEGINTDEEWN 231
Query: 191 -----TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
RP L+ + S + + +T +SPSW +HP+ + + + + P S N D
Sbjct: 232 EIRAWLRPVLLNFVKSKRILLEGVTFKNSPSWCLHPLSCEDFTVNNIQVINPWYSQNGDA 291
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
++ +SC N I ++ +GDD + +KSG DE G + G P Q++I++ + +
Sbjct: 292 LDLESCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLH-GHGGFVV 350
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVK 343
GSEMSGG+K++ ED T + T G+R K+ GRG V+
Sbjct: 351 GSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 388
>gi|167764884|ref|ZP_02437005.1| hypothetical protein BACSTE_03276 [Bacteroides stercoris ATCC
43183]
gi|167697553|gb|EDS14132.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 550
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 130/486 (26%), Positives = 209/486 (43%), Gaps = 85/486 (17%)
Query: 7 SRNNILHPHVIKILSTLLTLGLLSPQ---VAECRPTKNSYTIEFQALNCRK--------H 55
SR N L + + T +L LL Q A+C+ + + + N K +
Sbjct: 17 SRMNTLLKKLFTL--TTFSLALLPAQNAVHAQCKNSIDENIYKELPFNMPKVEQPSFPDY 74
Query: 56 SAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLY 115
+ + FG DG T NTKA N AI ++ A GG ++++P G WLTG L S+ L+
Sbjct: 75 TVSILQFGAKSDGTTLNTKAINDAIKAVN---AKGGGKVVIPEGLWLTGPIELLSNVNLH 131
Query: 116 IHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQ 175
K+AL++ + D + +P+L R R S I N ++ +TG +G
Sbjct: 132 TEKNALVVFTDDFNAYPILETSFEGLNTR-----RCQSPISARNAENIAITG-YGVFDGS 185
Query: 176 GEPW------------WIKYRK-----------------------KQFNV---------- 190
G+ W W K K FN
Sbjct: 186 GDSWRPVKKSKLTAGQWDALVKSGGVVDKSIWYPTAGSLKGALACKNFNNPEGIETDEEW 245
Query: 191 ------TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTD 244
RP L+ ++ S V + +T +SPSW +HP+ ++ I + + P S N D
Sbjct: 246 NEIRPWLRPVLLNIVKSKRVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQNGD 305
Query: 245 GINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIA 304
++ +SC N I +N +GDD + +KSG DE G K G P Q++I++ +
Sbjct: 306 ALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNTVLH-GHGGFV 364
Query: 305 LGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY------V 358
+GSEMSGG+K++ D T + T G+R K+ GRG V+ IY+ + M + + +
Sbjct: 365 VGSEMSGGVKNIYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHMIDIPHEALLFDL 424
Query: 359 FW---MTGDYGSHPDPGFDPKALPTVT--GINYRDMVADNVTQSAKLDGIRNDPFTGICI 413
F+ G+ G A+P VT ++RD+ N+ + + + I
Sbjct: 425 FYGGKAAGEETEEDLKGRMKTAVPQVTVETPSFRDIHISNIICKGSGRAMFFNGLPEMPI 484
Query: 414 SNVTIK 419
NVT+K
Sbjct: 485 RNVTVK 490
>gi|189468045|ref|ZP_03016830.1| hypothetical protein BACINT_04439 [Bacteroides intestinalis DSM
17393]
gi|189436309|gb|EDV05294.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 534
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 159/352 (45%), Gaps = 65/352 (18%)
Query: 55 HSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTL 114
++ + DFG GDG NTKA N AI ++ A GG ++++P G WLTG L S+ L
Sbjct: 56 YTVNIIDFGAKGDGIVLNTKAINDAIKAVN---AKGGGKVVIPGGLWLTGPIELLSNVNL 112
Query: 115 YIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATING 174
Y +AL+L + D +P++ R R S I N ++ +TG N +G
Sbjct: 113 YTEMNALILFTDDFEAYPIIETSFEGLNTR-----RCQSPISAWNAENIAITG-NGVFDG 166
Query: 175 QGEPWWIKYRK--------------------------------------KQFN------- 189
G+ W +K K FN
Sbjct: 167 SGDS-WRPVKKGKLTSSQWNSLVNSGGVVDEAGSIWYPTAGALKGAMATKDFNNPEGIET 225
Query: 190 ---------VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDS 240
RP L+ ++ S V + +T +SPSW +HP+ ++ I + + P S
Sbjct: 226 DEEWNEIRPWLRPVLLNIVKSKRVLLEGVTFKNSPSWCLHPLSCEHITIHNVKVFNPWYS 285
Query: 241 PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS 300
N D ++ +SC N I +N +GDD + +KSG DE G K G P Q++I++ +
Sbjct: 286 QNGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNTVLH-GH 344
Query: 301 AAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+GSEMSGG+K+V D T + T G+R K+ GRG V+ IY+ + M
Sbjct: 345 GGFVVGSEMSGGVKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNINM 396
>gi|442804291|ref|YP_007372440.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740141|gb|AGC67830.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 455
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 182/373 (48%), Gaps = 38/373 (10%)
Query: 66 GDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLAS 125
GDG+T + A AI +S A GG ++ PG +LTGS L S TL I + L
Sbjct: 14 GDGRTDCSNAIQRAIDTVS---ASGGGKVYFRPGIYLTGSIFLKSGVTLEIGEGVELRGI 70
Query: 126 QDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKY-- 183
DE+ +P + + G + P G LI +V +TG TI+GQG WW KY
Sbjct: 71 IDETAYPDIWTRVA-GIEMEWPAG----LINVIGQANVTITG-KGTIDGQGFYWWNKYWG 124
Query: 184 -------RKK----------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSN 226
RK+ ++ RP I + S V + +LTL SP WNVH YS++
Sbjct: 125 EDRLGGMRKEYTGKGLRWAVDYDCKRPRNILIYNSSQVTLRDLTLRRSPFWNVHICYSTD 184
Query: 227 VLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQ 286
V + GL I+ + P+TDGI+ DS N IE+ I DD + +K+G D G++V P++
Sbjct: 185 VYVSGLVIKDN-EGPSTDGIDVDSSRNVLIENCNIECNDDNICIKAGRDADGLRVNRPSE 243
Query: 287 HLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIY 346
++++R C A + +GSE SG I++V I A T G RIK+A+ RG ++ I
Sbjct: 244 NIVVRN--CSIGSGAGVTIGSETSGSIRNVEIYQIKANGTDGGFRIKSALTRGGVIENIR 301
Query: 347 VRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGIN---YRDMVADNVTQSAKLDGI 403
V M + F ++ +P + +LP N + ++ ++V + + +
Sbjct: 302 VHDFEMVNVLRPFIFQLNW----NPSYSYASLPENWKGNIPAHWKVLTEHVPEELGIPTV 357
Query: 404 RNDPFTGICISNV 416
RN +G+ ++
Sbjct: 358 RNIEISGVVAKSI 370
>gi|336414787|ref|ZP_08595131.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
gi|335942157|gb|EGN04005.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
Length = 529
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 157/338 (46%), Gaps = 63/338 (18%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ FG GDG NTKA N AI +++++ GG ++I+P G WLTG L S+ LY +
Sbjct: 52 IEKFGAKGDGLFLNTKAINDAIKDVNQH---GGGKVIIPEGIWLTGPIELLSNVNLYTEQ 108
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+AL+L + D +P++ R R S I N ++ +TG + T +G G+
Sbjct: 109 NALVLFTGDFEAYPIIATSFEGLETR-----RCQSPISARNAENIAITG-HGTFDGNGDC 162
Query: 179 W------------WIKYRK-------------------------KQFNV----------- 190
W W K K K FNV
Sbjct: 163 WRPVKKGKLTASQWKKLVKSGGVLDEKQEVWYPTAGSLKGAMACKDFNVPEGINTDEEWA 222
Query: 191 -----TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
RP L+ ++ S V + +T +SPSW +HP+ + + + + P S N D
Sbjct: 223 EIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDA 282
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
I+ +SC N I ++ +GDD + +KSG DE G + G P Q++I++ + +
Sbjct: 283 IDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLH-GHGGFVV 341
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVK 343
GSEMSGG+K++ ED T + T G+R K+ GRG V+
Sbjct: 342 GSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 379
>gi|359452816|ref|ZP_09242155.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
gi|358050136|dbj|GAA78404.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
Length = 489
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 193/403 (47%), Gaps = 61/403 (15%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG GD KT+NT A N AI + + A GG Q+I+P G+++TG+ +L S+ L++ +
Sbjct: 65 IIDFGANGDNKTNNTVAINNAIKSCN---AQGGGQVIIPQGQFITGAIHLLSNVNLHLEE 121
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG-----GNATIN 173
A+L S ++ LP + + G + G +S LI+ ++ +TG GNA N
Sbjct: 122 GAILSFSTSPEDY--LPAVFTRWEGLEMMG--YSPLIYAFEQENIAITGKGILEGNAN-N 176
Query: 174 GQGEPWWIKYRKKQFNVT--------------------------------------RPYL 195
PW K+++ + + RP
Sbjct: 177 TTWWPWKGKHKEAHWELLTDNNGQIIEQKTARDKLMRDAEQHIPVEQRIYADGAYLRPPF 236
Query: 196 IEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTR 255
I+ +NV I +T+ +SP W V+PV ++V + +T + PN+DG +P+SC +
Sbjct: 237 IQPYRCNNVLIEGITIKNSPFWLVNPVLCNSVTVCDVTFSS--HGPNSDGCDPESCNHVH 294
Query: 256 IEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKD 315
I++ +GDDC+A+KSG + G +V +Q+++I + + +GSE+SGG+ +
Sbjct: 295 IKNCVFDTGDDCIAIKSGRNADGRRVNTASQNIVIENC-HMKEGHGGVVIGSEISGGVNN 353
Query: 316 VRAEDIT--AINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGF 373
V ++ T + + + +RIKT RG ++ I +R + + T+K + Y F
Sbjct: 354 VFVQNCTMDSPHLERAIRIKTNSVRGGLIEHIRIRNIEVGTVKNAIVINFYYEEGDAGQF 413
Query: 374 DPKALPTVTGINYRDMVADNVTQSA-KLDGIRNDPFTGICISN 415
D P V I ++ NV A L+G DP I ++N
Sbjct: 414 D----PIVRDIKIDNLHCKNVLSKALYLNGFARDPIKDITLTN 452
>gi|375148498|ref|YP_005010939.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361062544|gb|AEW01536.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 547
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 185/419 (44%), Gaps = 72/419 (17%)
Query: 47 FQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSF 106
Q + +K S +T +G V DG+ NT+A N AI +K ++VP G W TG
Sbjct: 28 IQPTSFKKDSTWITKYGAVADGQMLNTQAINAAIDACNKKGG---GVVVVPAGLWATGPI 84
Query: 107 NLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVT 166
L S+ L++ K A+L ++D +++ L+ G P R S + TN T++ +T
Sbjct: 85 TLKSNVNLHLKKGAVLQFTKDFNQYQLVE-----GNWEGIPQMRNQSPVSATNATNIAIT 139
Query: 167 GGNATINGQGEPW-----------------------------------WIK--------- 182
G I+G GE W W+K
Sbjct: 140 G-FGVIDGGGEAWRQVRKEKLTESQWKEWVAGGGVVSEDGKSWYPSEQWLKAAKMKNPGE 198
Query: 183 --------YRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTI 234
+ K + RP LI + V + +T +S +W +HP+ S ++ ++ +T+
Sbjct: 199 FTPDKTPEFYKSIKDFLRPNLIVLTKCKKVLLEGVTFQNSAAWCLHPLMSEDLTVRNVTV 258
Query: 235 RAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLI 294
+ P + N DGI+ +SC IE++ GDD + +KSG DE G K GMPT+++IIR
Sbjct: 259 KNPWFAQNGDGIDVESCNRVLIENSSFDVGDDGLCMKSGRDEAGRKRGMPTENVIIRDCK 318
Query: 295 CISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKT 354
+ +GSEMSGG +++ + T I T G+R KT GRG V+ IY + M
Sbjct: 319 -VYHAHGGFVIGSEMSGGARNIWVNNCTFIGTDIGLRFKTTRGRGGIVENIYCNDIQMID 377
Query: 355 MKYVFWMTGDYGSHPDP---GFDPKALPTVTGI-------NYRDMVADNVTQSAKLDGI 403
+ + Y DP + + LP V + +R+ V NV + GI
Sbjct: 378 IPGEAILFDMYYMSVDPVALAGEKRELPKVEKLPVDEGTPQFRNFVVKNVVCNGAAKGI 436
>gi|374311245|ref|YP_005057675.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753255|gb|AEU36645.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 467
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 181/379 (47%), Gaps = 42/379 (11%)
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDA 120
DFG GDG T T + A L + GG ++++P G++LTG +L S TL + KDA
Sbjct: 54 DFGATGDGSTLETASLQQA---LDRCNVLGGGEVLIPAGRYLTGGLSLRSRVTLRLDKDA 110
Query: 121 LLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG-----GNATINGQ 175
LL S D + +P+ G+ PG +++L+ + ++ + G GN + G+
Sbjct: 111 TLLGSPDLAHYPVAQ---VRWEGKWIPG--YTALLHALDARNIAIVGEGKIEGNEAVAGR 165
Query: 176 GEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIR 235
K + RP L+E + D V + ++ + W++HP N++ + LTIR
Sbjct: 166 --------PTKDNPLRRPALLEFINCDGVHLEGISTSYAHMWSIHPTCCDNLVFRNLTIR 217
Query: 236 APIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLIC 295
+ N DGI+ DSC + I+ I SGDDC+++KSG E + PT+ + I
Sbjct: 218 ST--KTNGDGIDIDSCRHVLIDSCDIASGDDCISLKSGRGEEAYTMNRPTEDVRITNCTL 275
Query: 296 ISPDSAAIALGSEMSGGIKDVRAE--DITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMK 353
A + +G+E S GI++V E IT++ + + IK+ +GRGA+++ + VR M
Sbjct: 276 EGRGFACLGIGTESSAGIRNVIIEHCHITSV-YKYAIYIKSRIGRGAFIENLTVRDMDAA 334
Query: 354 TMKYVFWM-----TGDYGSHPDPGFDPKALPTVTGINYRDMVADNV--------TQSAK- 399
M+ F G + P PG + LP + ++ + T S K
Sbjct: 335 RMRMGFLRIDQTNAGIQDADPVPGLE--GLPLFRNFRFENIRVQDAPVLVEAINTDSGKM 392
Query: 400 LDGIRNDPFTGICISNVTI 418
LDG+ +G C ++I
Sbjct: 393 LDGLVLQGISGTCAKGISI 411
>gi|430005219|emb|CCF21020.1| Polygalacturonase-like protein [Rhizobium sp.]
Length = 521
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 178/419 (42%), Gaps = 32/419 (7%)
Query: 26 LGLLSPQVAECRPTKNSYTIEFQALNC----RKHSAVLTDFGGVGDGKTS--NTKAFNTA 79
L +LSP A + +++F+ C + L + D + N A A
Sbjct: 56 LDMLSPGTAYLLEVEGLGSLQFRTRECSGLVEAAAYGLLPYVSAQDTAAALRNADALQAA 115
Query: 80 ISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPS 139
I++L G L + PG+W L S TL++ + A L + W + P +
Sbjct: 116 IADLPV-----GGTLRIGPGRWTALPVTLRSDMTLHLAEGAELCSPSSRDSWSVFPARDN 170
Query: 140 YGR----GRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP--WWIKYRKKQFNVTRP 193
G EP F++ + +V+ G ++G G WW ++ + R
Sbjct: 171 AGHLLGSWEGEPAACFAAPLHAIGARRLVLEG-KGILDGAGNAGDWWGWAKETRDGARRA 229
Query: 194 YLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTN 253
+ ++ +V + T+ ++PSW +HP ++ L+I AP DSPNTDG NP+ +
Sbjct: 230 RGLHLIDCSDVTLFGFTIRNAPSWIIHPQGCHRLVAACLSIEAPHDSPNTDGFNPEGSSE 289
Query: 254 TRIEDNYIVSGDDCVAVKSG-WDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGG 312
R+E GDDC+A+K+G G + + R + + +GSEMSGG
Sbjct: 290 IRVEGVRFTVGDDCIAIKAGKRGPCGEAAHLRETRDVQIRHCLMERGHGGVVIGSEMSGG 349
Query: 313 IKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPG 372
+ DV ED I T G+R+KT GRG V I +RR+ M+ + F Y PD G
Sbjct: 350 VHDVLVEDCEMIGTDRGLRLKTRRGRGGSVSGITMRRVRMEGVLTAFSANAHYHCDPD-G 408
Query: 373 FD-------PKAL----PTVTGINYRDMVADNVTQS-AKLDGIRNDPFTGICISNVTIK 419
D P AL P + GI D+ V + G+ P + I N+ +
Sbjct: 409 HDEWVQSRQPAALDEGTPEIDGIAVEDIDLHEVGHAVGAFLGLPEAPIRNVSIRNLRVH 467
>gi|224538252|ref|ZP_03678791.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|423221595|ref|ZP_17208065.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224520112|gb|EEF89217.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|392645922|gb|EIY39642.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 534
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 194/429 (45%), Gaps = 71/429 (16%)
Query: 55 HSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTL 114
++ + DFG GDG NTKA N AI ++ A GG ++I+P G WLTG L S+ L
Sbjct: 56 YTVNIVDFGAKGDGIVLNTKAINDAIKAVN---AKGGGKVIIPEGLWLTGPIELLSNVNL 112
Query: 115 YIHKDALLLASQDESEWPLLP-------------PLPSY--------GRGRDEPGGRFSS 153
Y +AL+L + D +P++ P+ ++ G G + G
Sbjct: 113 YTEMNALVLFTDDFEAYPIIKTSFEGLDTRRCQSPISAWNAENIAITGHGVFDGSGDSWR 172
Query: 154 LIFGTNLT-----DVVVTGGNATINGQGEPWWI-------KYRKKQFN------------ 189
+ LT +V +GG ++ G W+ K FN
Sbjct: 173 PVKKGKLTAGQWSSLVSSGG--VVDASGSIWYPTAGALKGAMATKDFNNPEGINTDEEWN 230
Query: 190 ----VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
RP L+ ++ S V + +T +SPSW +HP+ ++ I + + P S N D
Sbjct: 231 EIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITIHNVKVFNPWYSQNGDA 290
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
++ +SC N I +N +GDD + +KSG DE G + G P Q++I++ + +
Sbjct: 291 LDLESCKNALIVNNIFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLH-GHGGFVV 349
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY------VF 359
GSEMSGG+K+V D T + T G+R K+ GRG V+ IY+ + M + + +F
Sbjct: 350 GSEMSGGVKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNINMIDIPHEALLFDLF 409
Query: 360 WMTGDYGSHPDPGFDPK---ALPTVTGIN--YRDMVADNVT-----QSAKLDGIRNDPFT 409
+ G + + + ++P VT +RD+ NVT ++ +G+ P
Sbjct: 410 YGGKGAGEETEDDLEGRMKSSVPPVTEKTPAFRDIHITNVTCRSVGRAMFFNGLPEMPIR 469
Query: 410 GICISNVTI 418
+ + +V I
Sbjct: 470 NVHVKDVVI 478
>gi|374376182|ref|ZP_09633840.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
gi|373233022|gb|EHP52817.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
Length = 547
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 165/348 (47%), Gaps = 64/348 (18%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+T FG V DG T NTK+ AI + A GG + VPPG WLTG L S+ L +
Sbjct: 40 ITKFGAVPDGYTLNTKSIQAAIDACT---AKGGGVVAVPPGLWLTGPLTLKSNVNLNLAA 96
Query: 119 DALLLASQDESEWPLLPP-LPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATING--- 174
A LL ++D++++PL+ + + R++ S I N ++ +TG N I+G
Sbjct: 97 GATLLFTKDKTQYPLVKANWEGFEQMRNQ------SPISAKNAVNIAITG-NGIIDGNGD 149
Query: 175 --------------------------QGEPWWI-----------------------KYRK 185
+G W+ + +
Sbjct: 150 AWRMVKKDKLTESQWKNLVASGGVLAEGGKTWMPSESYAKGNAMKDPGRLSPDKDAAFYQ 209
Query: 186 KQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
+ RP L+ + D V + +T +SP+W +HP+ S N+ ++ + ++ P + N DG
Sbjct: 210 SVKDFFRPNLVVLTSCDKVLLEGVTFQNSPAWCLHPLMSKNITVRNVFVKNPWYAQNGDG 269
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
I+ +SC+N IE++ GDD + +KSG D G K MPT+ +IIR + + +
Sbjct: 270 IDLESCSNVLIENSKFDVGDDGLCMKSGRDADGRKRAMPTKDVIIRGCTVYAAHGGFV-V 328
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMK 353
GSEMSGG+ +V + T I + G+R KT GRG V+ I+++ + MK
Sbjct: 329 GSEMSGGVNNVYVSNCTFIGSDIGLRFKTTRGRGGIVENIFIKDIFMK 376
>gi|325298782|ref|YP_004258699.1| Polygalacturonase [Bacteroides salanitronis DSM 18170]
gi|324318335|gb|ADY36226.1| Polygalacturonase [Bacteroides salanitronis DSM 18170]
Length = 535
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 199/427 (46%), Gaps = 69/427 (16%)
Query: 55 HSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTL 114
HS +T+FG V DG T NT+AF I +S+ GG ++VP G WLTG L S+ L
Sbjct: 57 HSRSITEFGAVADGITLNTEAFAQTIDAVSQ---QGGGTVVVPAGLWLTGPIVLKSNINL 113
Query: 115 YIHKDALLLASQDESEWPLLP-------------PLPS--------YGRG-RDEPGGRFS 152
++ ++AL+L + D +++P++ P+ + G+G D G +
Sbjct: 114 HLEENALVLFTADHTQYPIIKTSFEGLETRRCQSPVSANGAENIAITGKGVMDGNGDTWR 173
Query: 153 SLIFG----TNLTDVVVTGGNATINGQGEPWW-----IKYRK--KQFNV----------- 190
+ G + +V +GG +N +G+ W+ IK K FNV
Sbjct: 174 PVKKGKMTASQWNKLVASGG--VLNEKGDIWYPSEGSIKGANACKDFNVPEGIETEEDWN 231
Query: 191 -----TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
RP L+ + V + +T +SPSW +HP+ ++ + +++ P S N D
Sbjct: 232 SIRDWLRPVLLSFIKCKKVLLEGVTFKNSPSWCLHPLSCEDLTVYNISVSNPWYSQNGDA 291
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
++ +SC + ++ +GDD + +KSG DE G + G P Q++IIR + + +
Sbjct: 292 LDIESCNRVLVLNSSFDAGDDGICIKSGKDESGRRRGEPCQNIIIRDNVVLH-GHGGFVV 350
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVK-----EIYVRRMTMKTMKYVFW 360
GSEMSGG+K++ ++ T + T G+R K+ GRG V+ I + + + + + +
Sbjct: 351 GSEMSGGVKNIYVDNCTFLGTDVGLRFKSTRGRGGVVENIHINNINMINIPNEALIFDLF 410
Query: 361 MTGDYGSHPDPGFDPK---------ALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGI 411
G+ D PK P I +++ A NV ++ +G+ P I
Sbjct: 411 YGGNAPGEGDAPGAPKEEVVPPVTEETPAFRDIFIKNVTAKNVGRAVLFNGLPEMPIKNI 470
Query: 412 CISNVTI 418
+ NVTI
Sbjct: 471 FLENVTI 477
>gi|237721299|ref|ZP_04551780.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229449095|gb|EEO54886.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 539
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 157/338 (46%), Gaps = 63/338 (18%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ FG GDG NTKA N AI +++++ GG ++I+P G WLTG L S+ LY +
Sbjct: 62 IEKFGAKGDGLFLNTKAINDAIKDVNQH---GGGKVIIPEGIWLTGPIELLSNVNLYTKQ 118
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+AL+L + D +P++ R R S I N ++ +TG + T +G G+
Sbjct: 119 NALVLFTGDFEAYPIIATSFEGLETR-----RCQSPISARNAENIAITG-HGTFDGNGDC 172
Query: 179 W------------WIKYRK-------------------------KQFNV----------- 190
W W K K K FNV
Sbjct: 173 WRPVKKGKLTASQWKKLVKSGGVLDEKQEVWYPTAGSLKGAMACKDFNVPEGINTDEEWA 232
Query: 191 -----TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
RP L+ ++ S V + +T +SPSW +HP+ + + + + P S N D
Sbjct: 233 EIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDA 292
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
I+ +SC N I ++ +GDD + +KSG DE G + G P Q++I++ + +
Sbjct: 293 IDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLH-GHGGFVV 351
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVK 343
GSEMSGG+K++ ED T + T G+R K+ GRG V+
Sbjct: 352 GSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|320107891|ref|YP_004183481.1| glycoside hydrolase family protein [Terriglobus saanensis SP1PR4]
gi|319926412|gb|ADV83487.1| glycoside hydrolase family 28 [Terriglobus saanensis SP1PR4]
Length = 408
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 170/371 (45%), Gaps = 46/371 (12%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
+G GDG T +T A AI A GG +I K++T L S +
Sbjct: 31 YGARGDGATKDTVAIQKAIDAC---AGKGGTVVIGGSSKFITAPLTLKSKMIFRVEAGTT 87
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWI 181
L AS D +++P +GR +++ D+ +TGG I+G+GE WW
Sbjct: 88 LEASTDHNDFPEKEEFKDHGR---------QAMLTAKAAEDITITGG-GVIDGRGESWW- 136
Query: 182 KYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSP 241
Q N+ RP LI ++++ N+T +S W + P YS +++ + + + AP S
Sbjct: 137 ----PQPNLPRPRLIVFDHCKHIRMENITAQNSAMWQIVPYYSDDLVFRNMKVLAPQTSH 192
Query: 242 NTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLI---CISP 298
NTDGI+P + T I+ YI +GDD VA+KSG + G P L R + C
Sbjct: 193 NTDGIDPFASTKIVIDHVYIDTGDDNVAIKSG------QPGSPGPDLPSRDITITDCEFL 246
Query: 299 DSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYV 358
+++GSE++GG+++VRAE I T G+R+K+ RG + R +TM+ +K
Sbjct: 247 HGHGLSIGSEIAGGVQNVRAERIHFKGTDQGIRVKSNRDRGNDIGNFVFRDITMENVKTA 306
Query: 359 FWMTGDYGSHPD-----------PGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDP 407
++ Y PD P F + V + RD +A + G+ P
Sbjct: 307 ILLSEFYPKIPDTITEEPVTRLTPHFHDITIENVQAVGSRD--------AAVIVGLPESP 358
Query: 408 FTGICISNVTI 418
+ ++NV I
Sbjct: 359 IRNLKLTNVHI 369
>gi|284036172|ref|YP_003386102.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283815465|gb|ADB37303.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 544
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 165/367 (44%), Gaps = 58/367 (15%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
RK + ++ G V DG T NT A N AI +K GG ++VP G WLTG L S+
Sbjct: 35 RKDTIAISKLGAVADGLTLNTAAINKAIDQCTKA---GGGVVLVPRGLWLTGPVTLKSNV 91
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
L++ K ALL + +PL+ E R + I G L ++ +TG +
Sbjct: 92 NLHLAKGALLQFTNRREVYPLINTT-----WEGEEAIRNQAPISGVGLENIAITG-EGIL 145
Query: 173 NGQGEPW------------WIK------------------------------------YR 184
+G GE W W K Y
Sbjct: 146 DGAGEAWRMVKKGKLTSDQWKKLVASGGVLNDKQDTWYPTAQSLKGASEPVKAGQPMTYY 205
Query: 185 KKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTD 244
+ + RP ++ + + + +T +SP+W +HP+ ++ ++ +T + P + N D
Sbjct: 206 EGIKDFLRPNMLSLTRCKRILLEGVTFQNSPAWCLHPLLCEDITLRRVTAKNPWYAQNGD 265
Query: 245 GINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIA 304
G++ +SC N ++D GDD + +KSG DE G K G+PT+++ +R +
Sbjct: 266 GLDLESCRNGLVDDCTFDVGDDGICIKSGRDEQGRKRGVPTENITVRNSR-VYHAHGGFV 324
Query: 305 LGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGD 364
+GSEMSGG+K++ + T + T G+R KTA GRG V+ I+V + M + +
Sbjct: 325 IGSEMSGGVKNLYVSNCTFMGTDVGLRFKTARGRGGVVENIFVDGIDMTDIAGEAILFDM 384
Query: 365 YGSHPDP 371
Y + DP
Sbjct: 385 YYAAKDP 391
>gi|270339777|ref|ZP_06005984.2| exo-poly-alpha-D-galacturonosidase [Prevotella bergensis DSM 17361]
gi|270333786|gb|EFA44572.1| exo-poly-alpha-D-galacturonosidase [Prevotella bergensis DSM 17361]
Length = 464
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 192/418 (45%), Gaps = 60/418 (14%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L DFG GDG NT+AF+ AIS L+K GG +L+VP G WLTG +L + L++ +
Sbjct: 50 LKDFGATGDGTAMNTEAFSKAISALNK---QGGGRLVVPAGIWLTGLISLKDNIDLHLER 106
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+A+++ S D+ + L+P +P + + I + +V +T G I+G GE
Sbjct: 107 NAVIVFSPDKRD--LIPVKDG------KPDAKAAPCIRASKRKNVSIT-GEGIIDGNGEY 157
Query: 179 W------------WIKYRKKQFNVT---------------------------RPYLIEVM 199
W W +Y+ +T R +L+
Sbjct: 158 WRPVKRGKVSDTEWNQYKAMGGTITEKGDLWYPFNLKHLPNVADNYDAQEKMRTHLVRFT 217
Query: 200 FSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDN 259
NV + +TL +SP +++ P +NV+I + + P ++ N D I+ +C N I +N
Sbjct: 218 DCQNVLVQGVTLRNSPKFHLVPQRCTNVIIDNVKVICPWNAQNGDAIDIGNCKNVLIVNN 277
Query: 260 YIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAE 319
I +GDD + +K G + G+K G P +++ I+ I + +GSE GG+K++
Sbjct: 278 TIDAGDDGICMKGGVGQKGVKDG-PCENINIQDNI-VYHAHGGFVIGSEFCGGMKNIFVH 335
Query: 320 DITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK---YVF---WMTGDYGSHPDPGF 373
+ T T +G+R K+ VGRG +IY+ ++ M +K VF ++ G+
Sbjct: 336 NNTFAGTDTGLRFKSGVGRGGTTSDIYISKIYMTDIKDEAIVFQCDYVDRAVGAKAQTNK 395
Query: 374 DPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNC 431
P T I+ D+V K G + GI +SN TI T+ K + C
Sbjct: 396 PTSFSPNFTDIHISDVVCYGAKTGIKATGAKG-MIHGIEVSNSTIIYTKTDKAIDPEC 452
>gi|361068131|gb|AEW08377.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|376338080|gb|AFB33585.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 65/137 (47%), Positives = 95/137 (69%)
Query: 272 SGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVR 331
SGWDEYGI G P+ ++IIRR+I + S+ +ALGSEMSGGI+ V A+D+ N++ G+R
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 332 IKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVA 391
IKTA GRG YV+++Y+ +TMK + TG YG HPD +DP ALP + I ++D++
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 392 DNVTQSAKLDGIRNDPF 408
D + + ++GI+N PF
Sbjct: 121 DEIKTAGSVEGIQNAPF 137
>gi|291514459|emb|CBK63669.1| Endopolygalacturonase [Alistipes shahii WAL 8301]
Length = 555
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 173/378 (45%), Gaps = 77/378 (20%)
Query: 31 PQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADG 90
PQVA RP S T+ + DFGG GDG T NT ++ AA G
Sbjct: 35 PQVA--RPAIPSNTVS------------VADFGGSGDGHTLNTA---AFADAIAALAARG 77
Query: 91 GAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGR 150
G +++VP G W TG L + L++ ++A+++ S D++ +PL+ + G + R
Sbjct: 78 GGRVVVPEGVWYTGPIELKDNTELHLEQNAVIVFSDDKTLYPLVE---TTFEGLNTL--R 132
Query: 151 FSSLIFGTNLTDVVVTGGNATINGQGEPW------------------------------- 179
S I + +V +TG I+G G+ W
Sbjct: 133 CQSPISARGVKNVAITG-RGVIDGNGDAWRAVKQDKLNPRQWKTLVRSGGVLSDDGKTWY 191
Query: 180 -------------------WIKYR---KKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSW 217
W K R ++ + RP +I V +NV + + +SP W
Sbjct: 192 PSESYKFGATSGADQNVSTWAKTRADFERMHDFLRPVMIAVHHCENVLLEGVIFQNSPCW 251
Query: 218 NVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEY 277
N+HP +N+++ +T+R P + N DGI+ +SC N + ++ GDD + +KSG D+
Sbjct: 252 NIHPAMCTNLIVNDITVRCPDYAQNGDGIDIESCRNVVLTNSRFDVGDDGICIKSGKDKA 311
Query: 278 GIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVG 337
G G+P +++++ I + +GSEMSGG+++VR + T T G+R K+A G
Sbjct: 312 GRDRGIPCENILVDNCI-VFHGHGGFVVGSEMSGGVRNVRVSNCTFSGTDVGLRFKSARG 370
Query: 338 RGAYVKEIYVRRMTMKTM 355
RG V+ I++ + M +
Sbjct: 371 RGGVVENIWIEDIAMNNI 388
>gi|333382504|ref|ZP_08474174.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828815|gb|EGK01507.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
Length = 717
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 167/337 (49%), Gaps = 31/337 (9%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ D+G V DG T NTKA AI ++ +GG + PGK+LTGS L I K
Sbjct: 48 VADYGAVADGVTMNTKAIQKAIDECAR---NGGGTVTFSPGKYLTGSVYLKEGVHFIIPK 104
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
LL S D ++P + + G P S+LI +V+V+G ++ QG+
Sbjct: 105 HTTLLGSTDLKDYPEMNTRVA-GIEMQWP----SALINVLGQKNVMVSG-EGVVHAQGKV 158
Query: 179 WWIKY---RKK----------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSS 225
+W Y RK ++ RP + V S +V + LT + W + +YSS
Sbjct: 159 FWDSYWAMRKDYEAKGLRWIVDYDCKRPRTLLVSESSDVTVKGLTFRQAGFWTIQILYSS 218
Query: 226 NVLIQGLTIRAPI--DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGM 283
+ G+ I+ + P+TDG++ DS + +E+ I DD +KSG D G++V
Sbjct: 219 YCTVDGVIIQNNVGGHGPSTDGVDIDSSSYILVENCDIDCNDDNFCLKSGRDADGLRVNR 278
Query: 284 PTQHLIIRRLICIS-PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYV 342
PT++++IR CIS + GSE SGGI+ V AE + A T G+R+K+A+ RG
Sbjct: 279 PTEYIVIRN--CISRAGGGLLTCGSETSGGIRHVLAEGLKAKGTTVGIRLKSAMNRGGTT 336
Query: 343 KEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALP 379
+ IY+R + M ++ VF T ++ +P + LP
Sbjct: 337 EHIYIRDVEMDNVRTVFEATMNW----NPSYSYSTLP 369
>gi|86141279|ref|ZP_01059825.1| hypothetical protein MED217_04657 [Leeuwenhoekiella blandensis
MED217]
gi|85831838|gb|EAQ50293.1| hypothetical protein MED217_04657 [Leeuwenhoekiella blandensis
MED217]
Length = 483
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 188/384 (48%), Gaps = 54/384 (14%)
Query: 88 ADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEP 147
A GG ++++P G++LTG +L S+ L++ + A +L + D+S + LP + + G +
Sbjct: 94 AAGGGRVLIPAGRFLTGPIHLKSNVNLHLEEGAEVLFTTDKSAY--LPVVHTSYEGMEIM 151
Query: 148 GGRFSSLIFGTNLTDVVVTGGNATINGQG--EPWW-----IKY--------RKKQFNV-- 190
+S LI+ ++ VTG T NGQ E WW +Y +K N+
Sbjct: 152 --NYSPLIYAKGQKNIAVTG-KGTFNGQADKENWWPWCGAERYGHKEGAPKQKDDHNIPA 208
Query: 191 ---------------------TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
RP +E + +NV I +T ++P W +HP+ S V +
Sbjct: 209 LFTMIEDGTPVEERIFGEGHQLRPLFLETLECENVLIQGVTFTNAPFWVIHPLKSKYVTV 268
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
G+T+ + PN DG +P+ I + +GDDC+A+KSG + G +V +P+++++
Sbjct: 269 DGVTVNS--HGPNNDGCDPEYSKYVHITNCKFNTGDDCIAIKSGRNGDGRRVNIPSENIV 326
Query: 290 IRRLICISPDS-AAIALGSEMSGGIKDVRAEDIT--AINTQSGVRIKTAVGRGAYVKEIY 346
+ C D + +GSE+S G+++V + T + N +RIKT RG +V+ +Y
Sbjct: 327 VEN--CDMKDGHGGVVMGSEISAGVRNVFVRNCTMNSPNLDRAIRIKTNTLRGGFVENVY 384
Query: 347 VRRMTMKTMK-YVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKL-DGIR 404
V+ + + +K V + YG + + + +PT+ IN ++ +N + L G
Sbjct: 385 VKDIEVGQVKEAVLKINTYYGIYGKQ--EGEFIPTIQNINLENVTVENGGKYGLLIQGRE 442
Query: 405 NDPFTGICISNVTIKLTEKPKELQ 428
P TGI NVTIK + P +++
Sbjct: 443 EKPVTGISFKNVTIKNADTPLKVE 466
>gi|414071001|ref|ZP_11406978.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
gi|410806622|gb|EKS12611.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
Length = 489
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 193/403 (47%), Gaps = 61/403 (15%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG G+ KT+NT A N AI + + A GG Q+I+P G+++TG+ +L S+ L++ +
Sbjct: 65 IIDFGANGNNKTNNTVAINNAIKSCN---AQGGGQVIIPQGQFITGAIHLLSNVNLHLEE 121
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG-----GNATIN 173
A+L S ++ LP + + G + G +S LI+ ++ +TG GNA N
Sbjct: 122 GAILSFSTSPEDY--LPAVFTRWEGLEMMG--YSPLIYAFEQENIAITGKGILEGNAN-N 176
Query: 174 GQGEPWWIKYRKKQFNVT--------------------------------------RPYL 195
PW K+++ + + RP
Sbjct: 177 TTWWPWKGKHKEAHWELLTDNNGQIIEQKTARDKLMRDAEQHIPVEQRIYADGAYLRPPF 236
Query: 196 IEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTR 255
I+ +NV I +T+ +SP W V+PV ++V + +T + PN+DG +P+SC +
Sbjct: 237 IQPYRCNNVLIEGITIKNSPFWLVNPVLCNSVTVCDVTFSS--HGPNSDGCDPESCNHVH 294
Query: 256 IEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKD 315
I++ +GDDC+A+KSG + G +V +Q+++I + + +GSE+SGG+ +
Sbjct: 295 IKNCVFDTGDDCIAIKSGRNADGRRVNTASQNIVIENC-HMKEGHGGVVIGSEISGGVNN 353
Query: 316 VRAEDIT--AINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGF 373
V ++ T + + + +RIKT RG ++ I +R + + T+K + Y F
Sbjct: 354 VFVQNCTMDSPHLERAIRIKTNSVRGGLIEHIRIRNIEVGTVKNAIVINFYYEEGDAGQF 413
Query: 374 DPKALPTVTGINYRDMVADNVTQSA-KLDGIRNDPFTGICISN 415
D P V I ++ NV A L+G DP I ++N
Sbjct: 414 D----PIVRDIKIDNLHCKNVLSKALYLNGFARDPIKDITLTN 452
>gi|313236094|emb|CBY11419.1| unnamed protein product [Oikopleura dioica]
Length = 204
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 118/201 (58%), Gaps = 9/201 (4%)
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRD----EPGGRFSSLIFGTNLTDVVVTGGNATIN 173
K ++AS +E ++ ++P LPSY RD + S+ +G + +VV TG IN
Sbjct: 5 KGCEIIASANEDDYQIMPTLPSYCIARDGLAASKDALYRSVFYGEYVENVVFTG-EGLIN 63
Query: 174 GQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLT 233
G+GE WW + + RP L + +F N +I LT +SP W +H VYS N+ I +
Sbjct: 64 GEGENWWTR-NSQNLKFERPRLFQCLFCKNFKIEKLTWKNSPFWTIHFVYSENIEIADVA 122
Query: 234 IRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRL 293
I A +S NTDGI+ DS +N I D +I GDD +A+KSG+D G + GMPT+++++
Sbjct: 123 ILAEHESRNTDGIDIDSSSNVHIHDVFIDVGDDVIALKSGFDFCGREFGMPTKNVLVENS 182
Query: 294 ICISPDSAAIALGSEMSGGIK 314
+ I+ + A+GSEMSGG++
Sbjct: 183 VFINEN---FAIGSEMSGGVQ 200
>gi|373956691|ref|ZP_09616651.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373893291|gb|EHQ29188.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 474
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 190/398 (47%), Gaps = 52/398 (13%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
+G V +G T NT A AI S A GG + PGK+LTGS L + L I K
Sbjct: 51 YGAVNNGTTLNTSAIQKAIDACS---AKGGGIVSFAPGKYLTGSIFLKKNVRLQIDKGVE 107
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWI 181
LL SQ+ ++P + + G P ++LI + +V VTG +N QG+P+W
Sbjct: 108 LLGSQNLDDYPQMDTRIA-GIEMKWP----AALINIIDQENVAVTG-EGLVNAQGKPFWD 161
Query: 182 KY---RKK----------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
KY RK+ ++ RP + + S N+ I +TL + W V +YS V
Sbjct: 162 KYWNMRKEYDPKGLRWIVDYDAQRPRTLLISGSSNITIKAITLQQAGFWTVQVLYSKYVT 221
Query: 229 IQGLTIRAPIDS--PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQ 286
+ G+ +R ID P+TDGI+ DS T I++ I DD +K+G D G++V PT+
Sbjct: 222 VDGIIVRNNIDGHGPSTDGIDVDSSTYVLIQNCDIDCNDDDFCLKAGRDWDGLRVNKPTE 281
Query: 287 HLIIRRLICIS-PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEI 345
+++IR CIS + LGSE SGGI+ V A +++ T +G+ IK+A RG V++I
Sbjct: 282 YVVIRY--CISRAGGGLLTLGSETSGGIRHVLATNLSGNGTGNGLNIKSATTRGGTVEDI 339
Query: 346 YVRRMTMKTMKYVFWMTGD------YGSHPDPGFD------------------PKALPTV 381
+ + +TM + +T + Y PD G+D K +PT
Sbjct: 340 HFKNITMNNIGNAIQITMNWNPAYSYSKLPD-GYDINTVPAHWKKMLTHVEPAEKGIPTF 398
Query: 382 TGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
+ ++ ++ G++ P G SNV I+
Sbjct: 399 KDVYISNINIKGAKKAINAVGMQGHPLVGFHFSNVNIE 436
>gi|340348164|ref|ZP_08671257.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433652999|ref|YP_007296853.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
gi|339607813|gb|EGQ12738.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433303532|gb|AGB29347.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
Length = 857
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 193/415 (46%), Gaps = 80/415 (19%)
Query: 59 LTDFGG-VGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
+TDFG V N KA N AI+ S+ GG +++VP G+WLTG+ L S L +
Sbjct: 47 ITDFGASVRATAARNQKAINRAIATCSR---QGGGRVVVPRGEWLTGAIRLQSRVNLVVE 103
Query: 118 KDALLLASQDESEWPLLPP----LPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG-GNATI 172
+ A L + D + +PL+ L + +S I+ TDV +TG G
Sbjct: 104 EGATLEFAFDPALYPLVKTSWEGLECWN---------YSPCIYAYQATDVGLTGRGTVDG 154
Query: 173 NGQGEPWW-----IKY-----------------------------RKKQFNV---TRPYL 195
NG + WW KY +++F + RP L
Sbjct: 155 NGSRDTWWPMCGAAKYGFVAGQTKEAQSLGARAQLLKMAEDGVPADERRFGMGRGLRPQL 214
Query: 196 IEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTR 255
+ D + + LTL +SP W +HP+ S+N+ + G+T+ D PN DG +P++C+N
Sbjct: 215 VNFNACDGILVEGLTLANSPFWVIHPLLSTNITVDGVTVTN--DGPNGDGCDPEACSNVL 272
Query: 256 IEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIK 314
I++ +GDDC+A+KSG + G P++++IIR C D + +GSE+SGG +
Sbjct: 273 IQNCTFDTGDDCIAIKSGRNNDGRLWNRPSENIIIRH--CKMKDGHGGVVIGSEISGGCR 330
Query: 315 DVRAED--ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM-KTMKYVFWMTGDYGSHPD- 370
+V AED + + + +RIKT RG ++ I +R +T+ + + V + DY
Sbjct: 331 NVFAEDCHMDSPHLDRVLRIKTNNCRGGVIENINMRNVTVGQCNEAVLRINLDYEPREQC 390
Query: 371 -PGFDP---------------KALPTVTGINYRDMVADNVTQSAKLDGIRNDPFT 409
GF+P K + G+N + V+D ++ + DG+ P +
Sbjct: 391 YRGFEPTVRRVYMENVTSRESKYGVQIIGLNNIENVSDVTVKNCRFDGVSRQPVS 445
>gi|338211743|ref|YP_004655796.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
gi|336305562|gb|AEI48664.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
Length = 781
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 171/354 (48%), Gaps = 64/354 (18%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
RK + + +G DG T NTKA + AI A GG ++VP G WLTG L ++
Sbjct: 267 RKDTFNICRYGAKADGLTVNTKAISQAIEACH---AAGGGTVLVPAGLWLTGPIVLKNNV 323
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG----- 167
L+I K+ALL S++ ++P++ + ++ + R + I+G +LT++ +TG
Sbjct: 324 NLHIAKNALLQFSRNHDDYPIV--ITTW---EGQESYRCQAPIWGVDLTNIGITGEGVLD 378
Query: 168 ------------------------GNATINGQGEPWWIKYRKKQFN-------------- 189
++ +G+ W+ + K+ N
Sbjct: 379 GGGEVWRAIKRDKQTNTQWANLLRSGGVVSEKGDLWYPSEKSKKGNNLPNAGRILNGIHP 438
Query: 190 ----------VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPID 239
RP +I + NV + +T +SP+W +HP+ +V I+ +T++
Sbjct: 439 TPTELESYKDFLRPNMISLTRCKNVLLEGVTFQNSPAWTMHPLLCEHVSIRNVTVKNHWY 498
Query: 240 SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLIC-ISP 298
+ N+D ++ +SC N +E +GDD + +KSG DE G K G+PT++ II+ C +
Sbjct: 499 AQNSDALDLESCRNGIVEGCTFDTGDDGITIKSGRDEQGRKRGVPTENFIIKD--CKVYH 556
Query: 299 DSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+GSEMSGG++++ + T + + G+R KTA GRG V++IYV + M
Sbjct: 557 AHGGFVIGSEMSGGVRNMFVSNCTFMGSDVGLRFKTARGRGGVVEDIYVTDVNM 610
>gi|291459617|ref|ZP_06599007.1| polygalacturonase [Oribacterium sp. oral taxon 078 str. F0262]
gi|291417895|gb|EFE91614.1| polygalacturonase [Oribacterium sp. oral taxon 078 str. F0262]
Length = 526
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 156/323 (48%), Gaps = 24/323 (7%)
Query: 56 SAVLTD---FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
+VL D FG +GDGK +T AI K DG + +P G++LT L S
Sbjct: 80 ESVLLDVRAFGALGDGKNDDTACIQAAIEACPK---DGTVR--IPKGRYLTRPLFLRSGL 134
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRD---------EPGGRFSSLIFGTNLTDV 163
+L++ + A+LL +P LP + G+ +P ++SL+ G L +V
Sbjct: 135 SLWLDRGAVLLGDPSREHYPRLPGMTERSDGKGGFNLGSWEGDPETSYASLLTGIELRNV 194
Query: 164 VVTG-GNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPV 222
+ G G N WW +++ K+ RP I + ++I + + +SPSW +HP
Sbjct: 195 DIFGEGTVDGNADRSDWWEEHKTKR-GAWRPRTIFLCRCRCIRIQGVLVRNSPSWTIHPY 253
Query: 223 YSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVG 282
Y+ + + +TI P DSPNTDG +P+SC + + I GDDC+A+KSG +
Sbjct: 254 YTDGISLYNVTIWNPPDSPNTDGFDPESCEDVLLLGCRISVGDDCIAIKSGKARMAGERR 313
Query: 283 MPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG--A 340
+++ +R I + A+ +GSE + G+ V A T G+R+KT GRG
Sbjct: 314 KASRNFALRNSI-LERGHGALTIGSEAAAGVYRVEASLCIFSGTDRGLRLKTRRGRGPDC 372
Query: 341 YVKEIYVRRMTMKT--MKYVFWM 361
+ EIY + M+ M + F M
Sbjct: 373 FYDEIYFHHIRMENVPMPFTFNM 395
>gi|404405418|ref|ZP_10997002.1| glycoside hydrolase family protein [Alistipes sp. JC136]
Length = 1278
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 127/477 (26%), Positives = 226/477 (47%), Gaps = 50/477 (10%)
Query: 17 IKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAF 76
I ILS LLT + A R + + + + +TDFG G+ A
Sbjct: 6 ILILSLLLT----AAWNAGARNRAGEIERQIRLVTFPERDFRITDFGAEAGGEADCRPAV 61
Query: 77 NTAISNLSKYAADGGAQLIVPPGKWLT-GSFNLTSHFTLYIHKDALLLASQDESEWPLLP 135
AI S+ +GG ++++P G+W + G L SH L++ A+L S DE+++ LP
Sbjct: 62 AAAIDRCSR---EGGGRVVIPAGRWFSKGPVVLKSHVNLHLEAGAVLFFSSDEADY--LP 116
Query: 136 PLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQF------- 188
+ + G + +S LI+ T++ VT G I+G+G + ++ +Q
Sbjct: 117 AVLTRWEGTEVYN--YSPLIYAWQATNIAVT-GQGVIDGRGSHNFAHWKPRQKADQKALR 173
Query: 189 -----------------NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQG 231
+ RP ++E + +V I +T +DSP W +HP+ NV ++G
Sbjct: 174 RMGTDLVPVSDRLFGEGHYLRPAMLEPVNCTDVLIEGVTFVDSPFWVIHPLACENVTVRG 233
Query: 232 LTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIR 291
+T+ + + N DG +P+SCTN IED +GDD +A+KSG D ++G PT++++IR
Sbjct: 234 VTVDSY--NLNNDGCDPESCTNVLIEDCTFRTGDDGIAIKSGRDNDAWRIGRPTENVLIR 291
Query: 292 RLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMT 351
+ + +GSE+SGG+++V E++ + +G+ K+ + RG Y+++++V +
Sbjct: 292 NC-SFRSKANGVCIGSEISGGVRNVVVENVRMSDVGNGIYFKSNLDRGGYIEDVFVCGVE 350
Query: 352 MKTM-KYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSA-KLDGIRNDPFT 409
++ K + DY S P A G D+ A ++ + G + P
Sbjct: 351 ADSVRKTLVLFEPDYKSESRENH-PTAF---RGFVIEDVRAQWAGKAGIDIRGFADMPVR 406
Query: 410 GICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTDCFFPDDKLPI 466
+ IS +T+ T +P ++ N I I S VT E +++P C + K +
Sbjct: 407 DVTISRLTLASTPEPVIVR-NAAGI--ILSEVTING-ERQDRRDPDACISLNGKWEV 459
>gi|317505480|ref|ZP_07963398.1| polygalacturonase [Prevotella salivae DSM 15606]
gi|315663393|gb|EFV03142.1| polygalacturonase [Prevotella salivae DSM 15606]
Length = 494
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 203/441 (46%), Gaps = 74/441 (16%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
LTDFG V DG T NT+AF AIS L+K GG LIVP G +LTG +L + +++ +
Sbjct: 72 LTDFGAVPDGITLNTEAFRKAISKLTKL---GGGHLIVPAGIYLTGPISLKDNIDIHLER 128
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+AL+L S ++ ++ +EP + S I + T++ +TG TI+G G+
Sbjct: 129 NALILFSPNKKDF--------LKATDNEPQPKVVSGITASKRTNISITG-EGTIDGNGQW 179
Query: 179 W------------WIKYR------------------KKQFNVT---------RPYLIEVM 199
W W +Y+ K Q N+ R +LI +
Sbjct: 180 WRPVKRVKMSDVEWNQYKAMGGTITPKGDLWYPFNLKTQENIAPNASEQEKMRAHLIRIT 239
Query: 200 FSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDN 259
+NV I +T+ +SP +++ P +NV++ G+T+R P ++ N DGI+ +C+N I ++
Sbjct: 240 ECNNVLIQGVTIQNSPRFHIVPQRCNNVIVDGITVRCPWNAQNGDGIDVGNCSNVLIVNS 299
Query: 260 YIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAE 319
GDD + +KSG E + ++ I+ + +GSE+ GG+K++
Sbjct: 300 TFDVGDDAICMKSG-AEKADQTNRSCVNINIQNN-TVYHGHGGFVIGSEVIGGMKNIYVN 357
Query: 320 DITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMK-------TMKYVFWMTGDYGSHPD-P 371
+ T +G+R K+AVGRG ++I++ M T + +W + P P
Sbjct: 358 NNFFSGTDTGLRFKSAVGRGGKTEDIFINNCYMNNILNEAITFETTYWDNHVGATQPQKP 417
Query: 372 GFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTG----ICISNVTIKLTEKPKEL 427
D + +P N++D+ NVT I G I I N T T+K ++
Sbjct: 418 AKDAEFVP-----NFQDIHITNVTCRGAKTAIAAHGAPGMVHDISIENSTFYYTDKATDI 472
Query: 428 QWNC----TNIQGITSRVTPQ 444
+C NI+ + PQ
Sbjct: 473 DSSCKITLKNIKFGAPTIVPQ 493
>gi|408376656|ref|ZP_11174260.1| Polygalacturonase [Agrobacterium albertimagni AOL15]
gi|407749346|gb|EKF60858.1| Polygalacturonase [Agrobacterium albertimagni AOL15]
Length = 503
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 174/373 (46%), Gaps = 28/373 (7%)
Query: 72 NTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEW 131
NT A +AI+ A G L +P G W +G L S TL I + A+L S
Sbjct: 100 NTTAIQSAIA-----AVPAGGTLRLPAGSWTSGPLFLKSDMTLLIEEGAVLQDSGTREGR 154
Query: 132 PLLPPLPSYGR------GRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE--PWWIKY 183
+L GR G E F+SL+ + ++ + G ++G G+ WW
Sbjct: 155 RILSSRHPEGRVLGTWEGVAEAC--FASLLNAIDCDNLTICG-QGIVDGGGDRGDWWTWP 211
Query: 184 RKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNT 243
++ + RP + + ++ I+ +T+ +SPSW VHPV +VL GLTIR DSPNT
Sbjct: 212 KETRDGARRPRTMFLSGCRHLTIAGITVRNSPSWTVHPVLCEDVLAVGLTIRNHPDSPNT 271
Query: 244 DGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAI 303
DG+NP+S N R+ I GDDCVA+K+G + PT+++ IR + + A+
Sbjct: 272 DGLNPESSQNIRLVGLDISVGDDCVAIKAGKRDPRGGPDRPTRNVEIRNCL-MQRGHGAV 330
Query: 304 ALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTG 363
+GSEMS GI DV T G+RIKT GRG V +I V M+ + +
Sbjct: 331 VMGSEMSQGISDVSISRCHFFGTDRGLRIKTRRGRGGTVSKISVHDCRMEDVATPIAVNA 390
Query: 364 DYGSHPDPGFD--------PKAL--PTVTGINYRDM-VADNVTQSAKLDGIRNDPFTGIC 412
Y D D P +L P + GI+ R++ V+ T +A G+ +
Sbjct: 391 FYFCDADGRSDYVQSRTALPVSLTTPKIEGIDIRNLEVSGAETAAAVFYGLPESTIDAVS 450
Query: 413 ISNVTIKLTEKPK 425
I ++I + K
Sbjct: 451 IDGMSIAYSADAK 463
>gi|160887001|ref|ZP_02068004.1| hypothetical protein BACOVA_05015 [Bacteroides ovatus ATCC 8483]
gi|293369359|ref|ZP_06615944.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|156107412|gb|EDO09157.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|292635526|gb|EFF54033.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 469
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 192/396 (48%), Gaps = 58/396 (14%)
Query: 54 KHSAVLTDFGGVGDGKTSNT-KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
K + ++TDFG D + + +A N AI S GG +IVP G + TG L S+
Sbjct: 47 KRTFLITDFGAKTDDEANPCHEAINQAILQCS---LSGGGTVIVPKGTFYTGPITLKSNV 103
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
++ + A+L S D+S + P + + G D LI+ +++ +TG I
Sbjct: 104 NFHLEEGAVLKFSTDQSLY--FPAVLTRWEGIDCYNAH--PLIYAYGESNIAITG-KGII 158
Query: 173 NGQG--EPWW-----IKYRKKQFNVT------------------------------RPYL 195
+GQG E WW +KY K+ V RP L
Sbjct: 159 DGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMRPEDGMRPQL 218
Query: 196 IEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTR 255
+ + + I +TL++SP W +HP++ ++++ G+T+ PN DG +P+SC N
Sbjct: 219 LNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNR--GPNGDGCDPESCKNVL 276
Query: 256 IEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKD 315
IE+ +GDDC+A+KSG +E G K +P++++I+R + + + +GSE+SGG ++
Sbjct: 277 IENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCM-MKNGHGGVVIGSEISGGYRN 335
Query: 316 VRAED--ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM-KTMKYVFWMTGDYGSHP--D 370
+ ED + + N +RIKT+ RG ++ +YVR +T+ + + V + Y +
Sbjct: 336 LFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAVLRINLQYENREKCK 395
Query: 371 PGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRND 406
GFD P V ++ +++ + + G+ +D
Sbjct: 396 RGFD----PIVRNVHLKNVTCEKSKLGVLIIGLEDD 427
>gi|304396605|ref|ZP_07378486.1| glycoside hydrolase family 28 [Pantoea sp. aB]
gi|304356114|gb|EFM20480.1| glycoside hydrolase family 28 [Pantoea sp. aB]
Length = 430
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/366 (30%), Positives = 172/366 (46%), Gaps = 36/366 (9%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DF V D + +T+A AI +A G +++P G++LTG+ L S TL + K
Sbjct: 6 IIDFAAVPDATSLSTQAIQRAID-----SASAGDTVLIPAGRFLTGALFLKSEMTLELAK 60
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
DA+LL SQ ++P +P+ G D + + + N V G+ T +GQG
Sbjct: 61 DAMLLGSQRLEDYP---DIPTRVAGIDMV---WPAAMLNINHCRNVTVCGSGTFDGQGAV 114
Query: 179 WWIK-------------YRKK------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNV 219
WW K Y ++ ++ RP + V S+ V + + T DS WN+
Sbjct: 115 WWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNVVVYESECVTLEDFTSQDSGFWNL 174
Query: 220 HPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGI 279
H YS V +Q L + P+TDGI+ DS R+E + DD + VKSG
Sbjct: 175 HVCYSKQVNLQRLRVMNAT-GPSTDGIDIDSSQLVRVESCTVSCNDDNICVKSGRGAEAQ 233
Query: 280 KVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG 339
++G + +IIR C + I LGSE SGGI++V E T G RIK+A RG
Sbjct: 234 QLGRTARDIIIRD--CTLLKGSGITLGSETSGGIENVIIEHNRFSGTGVGFRIKSARNRG 291
Query: 340 AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAK 399
++K I VR + M+ + Y F + ++ P + + T ++R + A VT A
Sbjct: 292 GWIKNIVVRHLKMEDVCYPFMLQLNW--FPQYSYSEQPADTKQPPHWRKL-ASGVTGDAG 348
Query: 400 LDGIRN 405
L + N
Sbjct: 349 LTRVEN 354
>gi|325105433|ref|YP_004275087.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974281|gb|ADY53265.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 569
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 130/481 (27%), Positives = 213/481 (44%), Gaps = 80/481 (16%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
+K + + +G DG T NTK+ N AI SK +GG + + G WLTG L S+
Sbjct: 56 KKDTFYVEKYGAKPDGITLNTKSINAAIDACSK---NGGGVVFLGGGVWLTGPIQLKSNV 112
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
L++ +DA+LL ++D+S++ L+ G +P S I N+ +V +TG I
Sbjct: 113 NLHVKRDAILLFTKDKSQYKLVE-----GNWEGKPALVNESPISAFNVENVAITG-EGII 166
Query: 173 NGQGEPW-----------------------------WI---KYRK-------KQF----- 188
+G GE W W+ Y+K + F
Sbjct: 167 DGSGEVWRLVKKGKLTASQWKNLVASGGVLSKDGQSWMPSESYKKGDEAGNARYFKAGSK 226
Query: 189 --------NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDS 240
+ RP L + S + + +T +SP+W +HP+ S +++++ + ++ P +
Sbjct: 227 LADYEPMKDFYRPNLFVIANSKRILLEGVTFQNSPAWCLHPLMSEDLVLRNVFVKNPWYA 286
Query: 241 PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS 300
N DGI+ +SC N IE++ GDD + +KSG DE G K MPT+ +I+R +
Sbjct: 287 QNGDGIDIESCKNVLIENSTFDVGDDGICIKSGRDEAGRKRAMPTEDVIVRNNVVYHA-H 345
Query: 301 AAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTM---KY 357
+GSEMSGG K++ + + I T G+R KT GRG V+ +Y+ MK +
Sbjct: 346 GGFVIGSEMSGGAKNLYVYNNSFIGTDIGLRFKTTRGRGGIVENVYIANSYMKDIPGDAI 405
Query: 358 VFWM----------TGDYGSHPDPGFDP--KALPTVTGINYRDMVADNVTQSAKLDGIRN 405
+F M G+ P F P +A P +++V + + + GI
Sbjct: 406 LFDMYYEAKDPVPLAGEKRPAPVAEFKPVTEATPQFKNFYIKNVVCNGADKGLFVRGIPE 465
Query: 406 DPFTGICISNVTIKLTEKPKELQWNCTNIQG---ITSRVTPQACELLPKKEPTDCFFPDD 462
I + ++T++ + ++ N NI+ ITS P KK D F D
Sbjct: 466 MNVQNIYLEDLTLEAKTGIEIIEGNNINIKNVHLITSDKNPLIFVENSKKINIDGFKSDK 525
Query: 463 K 463
K
Sbjct: 526 K 526
>gi|336406856|ref|ZP_08587502.1| hypothetical protein HMPREF0127_04815 [Bacteroides sp. 1_1_30]
gi|335948529|gb|EGN10233.1| hypothetical protein HMPREF0127_04815 [Bacteroides sp. 1_1_30]
Length = 469
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 192/396 (48%), Gaps = 58/396 (14%)
Query: 54 KHSAVLTDFGGVGDGKTSNT-KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
K + ++TDFG D + + +A N AI S GG +IVP G + TG L S+
Sbjct: 47 KRTFLITDFGAKTDDEANPCHEAINQAILQCS---LSGGGTVIVPKGTFYTGPITLKSNV 103
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
++ + A+L S D+S + P + + G D LI+ +++ +TG I
Sbjct: 104 NFHLEEGAVLKFSTDQSLY--FPAVLTRWEGIDCYNAH--PLIYAYGESNIAITG-KGII 158
Query: 173 NGQG--EPWW-----IKYRKKQFNVT------------------------------RPYL 195
+GQG E WW +KY K+ V RP L
Sbjct: 159 DGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETLTPVYKRLMKPEDGMRPQL 218
Query: 196 IEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTR 255
+ + + I +TL++SP W +HP++ ++++ G+T+ PN DG +P+SC N
Sbjct: 219 LNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNR--GPNGDGCDPESCKNVL 276
Query: 256 IEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKD 315
IE+ +GDDC+A+KSG +E G K +P++++I+R + + + +GSE+SGG ++
Sbjct: 277 IENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCM-MRNGHGGVVIGSEISGGYRN 335
Query: 316 VRAED--ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM-KTMKYVFWMTGDYGSHP--D 370
+ ED + + N +RIKT+ RG ++ +YVR +T+ + + V + Y +
Sbjct: 336 LFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAVLRINLQYENREKCK 395
Query: 371 PGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRND 406
GFD P V ++ +++ + + G+ +D
Sbjct: 396 RGFD----PIVRNVHLKNVTCEKSKLGVLIIGLEDD 427
>gi|357386032|ref|YP_004900756.1| Polygalacturonase [Pelagibacterium halotolerans B2]
gi|351594669|gb|AEQ53006.1| Polygalacturonase [Pelagibacterium halotolerans B2]
Length = 508
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 160/347 (46%), Gaps = 23/347 (6%)
Query: 91 GAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDE---- 146
GA L VPPG W TG L S +++ + A + D + +L + GR +
Sbjct: 115 GATLYVPPGIWRTGPVFLKSGLFVHVPEGATIKGVADRGAYRMLEAFGADGRQQASWEGV 174
Query: 147 PGGRFSSLIFGTNLTDVVVTGGNATINGQGEP--WWIKYRKKQFNVTRPYLIEVMFSDNV 204
P + SL+ + D V G I+G G WW ++ + RP + +
Sbjct: 175 PARCYGSLLTAID-ADGVTIAGKGVIDGAGAEGDWWEWPKETREGARRPRTVFANRCTQL 233
Query: 205 QISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSG 264
++S LT+ +SPSW +HP+ + + L I P DSPNTDG+NP+S T+ I G
Sbjct: 234 KMSGLTVRNSPSWTIHPLDCAGAVFADLAIENPPDSPNTDGLNPESSTDIEIVGVRFSVG 293
Query: 265 DDCVAVKSG--WDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDIT 322
DDC+A+K+G W + V PT+++ +R + + + +GSEMSG + DV T
Sbjct: 294 DDCIAIKAGKIWPDG--TVPAPTRNVSVRHCL-MERGHGGVVIGSEMSGSVTDVTVAFCT 350
Query: 323 AINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPD----------PG 372
+T G+RIKT GRG V I + M +K + Y PD P
Sbjct: 351 MRDTDRGLRIKTRRGRGGAVARIVLSDCLMDGVKTPLSINSHYFCDPDGRSDAVQNRAPA 410
Query: 373 FDPKALPTVTGINYRDMVADNVTQS-AKLDGIRNDPFTGICISNVTI 418
A P + I + N + A + G+ P +G+ I++V++
Sbjct: 411 PVSAATPKIGDIRFERTEVKNAHHALAYVLGLAEAPVSGLTIADVSV 457
>gi|260642167|ref|ZP_05414737.2| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260623411|gb|EEX46282.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 469
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 192/396 (48%), Gaps = 58/396 (14%)
Query: 54 KHSAVLTDFGGVGDGKTSNT-KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
K + ++TDFG D + + +A N AI S GG +IVP G + TG L S+
Sbjct: 47 KRTFLITDFGAKTDDEANPCHEAINQAILQCS---LSGGGTVIVPKGTFYTGPITLKSNV 103
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
++ + A+L S D+S + P + + G D LI+ +++ +TG I
Sbjct: 104 NFHLEEGAVLKFSTDQSLY--FPAVLTRWEGIDCYNAH--PLIYAYGESNIAITG-KGII 158
Query: 173 NGQG--EPWW-----IKYRKKQFNVT------------------------------RPYL 195
+GQG E WW +KY K+ V RP L
Sbjct: 159 DGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQL 218
Query: 196 IEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTR 255
+ + + I +TL++SP W +HP++ ++++ G+T+ PN DG +P+SC N
Sbjct: 219 LNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNR--GPNGDGCDPESCKNVL 276
Query: 256 IEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKD 315
IE+ +GDDC+A+KSG +E G K +P++++I+R + + + +GSE+SGG ++
Sbjct: 277 IENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCM-MRNGHGGVVIGSEISGGYRN 335
Query: 316 VRAED--ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM-KTMKYVFWMTGDYGSHP--D 370
+ ED + + N +RIKT+ RG ++ +YVR +T+ + + V + Y +
Sbjct: 336 LFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAVLRINLQYENREKCK 395
Query: 371 PGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRND 406
GFD P V ++ +++ + + G+ +D
Sbjct: 396 RGFD----PIVRNVHLKNVTCEKSKLGVLIIGLEDD 427
>gi|423294951|ref|ZP_17273078.1| hypothetical protein HMPREF1070_01743 [Bacteroides ovatus
CL03T12C18]
gi|392674531|gb|EIY67977.1| hypothetical protein HMPREF1070_01743 [Bacteroides ovatus
CL03T12C18]
Length = 469
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 192/396 (48%), Gaps = 58/396 (14%)
Query: 54 KHSAVLTDFGGVGDGKTSNT-KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
K + ++TDFG D + + +A N AI S GG +IVP G + TG L S+
Sbjct: 47 KRTFLITDFGAKTDDEANPCHEAINQAILQCS---LSGGGTVIVPKGTFYTGPITLKSNV 103
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
++ + A+L S D+S + P + + G D LI+ +++ +TG I
Sbjct: 104 NFHLEEGAVLKFSTDQSLY--FPAVLTRWEGIDCYNAH--PLIYAYGESNIAITG-KGII 158
Query: 173 NGQG--EPWW-----IKYRKKQFNVT------------------------------RPYL 195
+GQG E WW +KY K+ V RP L
Sbjct: 159 DGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQL 218
Query: 196 IEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTR 255
+ + + I +TL++SP W +HP++ ++++ G+T+ PN DG +P+SC N
Sbjct: 219 LNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNR--GPNGDGCDPESCKNVL 276
Query: 256 IEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKD 315
IE+ +GDDC+A+KSG +E G K +P++++I+R + + + +GSE+SGG ++
Sbjct: 277 IENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCM-MRNGHGGVVIGSEISGGYRN 335
Query: 316 VRAED--ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM-KTMKYVFWMTGDYGSHP--D 370
+ ED + + N +RIKT+ RG ++ +YVR +T+ + + V + Y +
Sbjct: 336 LFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAVLRINLQYENREKCK 395
Query: 371 PGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRND 406
GFD P V ++ +++ + + G+ +D
Sbjct: 396 RGFD----PIVRNVHLKNVTCEKSKLGVLIIGLEDD 427
>gi|329956871|ref|ZP_08297439.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523628|gb|EGF50720.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 522
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 192/421 (45%), Gaps = 66/421 (15%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG DG+T NT+A N AI +S+ GG ++++P G WLTG L ++ L++ K
Sbjct: 60 IRDFGAKADGETLNTEAINNAIKAVSE---KGGGKVVIPEGLWLTGPVVLQNNVNLHVEK 116
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGG---------- 168
+AL+L S D +PL+ + G D R S I N ++ +TG
Sbjct: 117 NALVLFSGDADLYPLVR---TSFEGLDML--RCQSPISAMNAENIAITGHGVLDGSGDSW 171
Query: 169 -----NATINGQ--------------GEPWW----------IKYRKKQFNVT-------- 191
N +GQ G+ W+ + K++ ++
Sbjct: 172 RPVKRNKMTDGQWKSLLKSGGVVDESGKVWYPNEGALKASILTGSKEKREISDSEWEGMK 231
Query: 192 ---RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINP 248
RP L+ ++ S V + +T +SPSW +HP+ ++ + G+ + P S N D ++
Sbjct: 232 RWLRPVLLSIVKSKRVLLEGVTFRNSPSWCLHPLSCEDLTLNGVKVFNPWYSQNGDALDV 291
Query: 249 DSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSE 308
+SC N + ++ +GDD + +KSG + G + G P ++++++ + +GSE
Sbjct: 292 ESCKNVVVTNSLFDAGDDAICIKSGKNADGRRRGEPCENVLVKNNTVLH-GHGGFVVGSE 350
Query: 309 MSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM------KTMKYVFWMT 362
MSGG+++V D T I T G+R K+ GRG V+ +YV + M + +++
Sbjct: 351 MSGGVRNVYVADCTFIGTDVGLRFKSTRGRGGVVENVYVDNINMINIPGDALIADLYYAV 410
Query: 363 GDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTE 422
D P P + P+ I+ ++ ++ L+G+ P + N+ I +
Sbjct: 411 KDAPGAPVPAVTEET-PSFKNIHISNISCKGAGRAMFLNGLPEMPIENFSVRNMRITDAQ 469
Query: 423 K 423
K
Sbjct: 470 K 470
>gi|116626800|ref|YP_828956.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116229962|gb|ABJ88671.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 462
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 190/422 (45%), Gaps = 69/422 (16%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+T FG DGKT T A AI ++ GG +++ G +LTG+ +L S+ L + K
Sbjct: 53 ITRFGARADGKTDCTDAIRKAIDEAARV---GGGRVMAREGAFLTGAIHLKSNVNLVVEK 109
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQ--G 176
A L S D +P++ R +S I+ N ++ +TGG T++GQ G
Sbjct: 110 GATLRFSPDPKLYPIV-----LTRFEGLECMNYSPFIYAFNQQNIAITGG-GTLDGQASG 163
Query: 177 EPWW----------------------IKYRKKQFNVT----------RPYLIEVMFSDNV 204
E WW ++ +K V RP I+ NV
Sbjct: 164 EHWWPWAGKRGARPDDPNQRKARAALVEMAEKGVPVADRKFGDGAWLRPMFIQPYRCTNV 223
Query: 205 QISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSG 264
QI ++T+ +SP + +HPV NV+ + + + + PN DG +P+S + I+ +G
Sbjct: 224 QIEDVTITNSPMYEMHPVLCRNVIARNVKVSS--HGPNNDGCDPESSVDVLIDGCTFDTG 281
Query: 265 DDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRAED--I 321
DDC+A+KSG + G ++ P+++LI++ C+ D + +GSE SGGI++V A+D +
Sbjct: 282 DDCIAIKSGRNADGRRLHSPSENLIVQN--CVMKDGHGGVTMGSECSGGIRNVFAQDCQM 339
Query: 322 TAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYV------FWMTGDYGSHPDPGFDP 375
+ N +R K RG ++ +Y+R + + ++ G+ GS
Sbjct: 340 DSPNLNVALRFKNNAVRGGVIEHVYMRNVKAGQVAQAAIDVDFYYEEGEKGSF------- 392
Query: 376 KALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQ 435
P V + ++ T L G ++ P I I N T KP + N++
Sbjct: 393 --TPVVRDVEVVNLEVKKCTTPWSLRGFKSAPVRDIRIRNCTFAGATKPPVAE----NVE 446
Query: 436 GI 437
G+
Sbjct: 447 GL 448
>gi|295086754|emb|CBK68277.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 459
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 192/396 (48%), Gaps = 58/396 (14%)
Query: 54 KHSAVLTDFGGVGDGKTSNT-KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
K + ++TDFG D + + +A N AI S GG +IVP G + TG L S+
Sbjct: 37 KRTFLITDFGAKTDDEANPCHEAINQAILQCS---LSGGGTVIVPKGTFYTGPITLKSNV 93
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
++ + A+L S D+S + P + + G D LI+ +++ +TG I
Sbjct: 94 NFHLEEGAVLKFSTDQSLY--FPAVLTRWEGIDCYNAH--PLIYAYGESNIAITG-KGII 148
Query: 173 NGQG--EPWW-----IKYRKKQFNVT------------------------------RPYL 195
+GQG E WW +KY K+ V RP L
Sbjct: 149 DGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQL 208
Query: 196 IEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTR 255
+ + + I +TL++SP W +HP++ ++++ G+T+ PN DG +P+SC N
Sbjct: 209 LNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNR--GPNGDGCDPESCKNVL 266
Query: 256 IEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKD 315
IE+ +GDDC+A+KSG +E G K +P++++I+R + + + +GSE+SGG ++
Sbjct: 267 IENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCM-MRNGHGGVVIGSEISGGYRN 325
Query: 316 VRAED--ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM-KTMKYVFWMTGDYGSHP--D 370
+ ED + + N +RIKT+ RG ++ +YVR +T+ + + V + Y +
Sbjct: 326 LFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAVLRINLQYENREKCK 385
Query: 371 PGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRND 406
GFD P V ++ +++ + + G+ +D
Sbjct: 386 RGFD----PIVRNVHLKNVTCEKSKLGVLIIGLEDD 417
>gi|373462557|ref|ZP_09554274.1| hypothetical protein HMPREF9944_02538 [Prevotella maculosa OT 289]
gi|371948030|gb|EHO65924.1| hypothetical protein HMPREF9944_02538 [Prevotella maculosa OT 289]
Length = 853
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 128/440 (29%), Positives = 194/440 (44%), Gaps = 78/440 (17%)
Query: 55 HSAVLTDFGGVGDGKTS-NTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFT 113
S V+T FG + N KA AI+ L+K GG ++IVP GKW TG+ L S
Sbjct: 42 RSVVITKFGAKTSASAAQNQKAILRAIAVLAK---QGGGKVIVPAGKWNTGALRLQSGIE 98
Query: 114 LYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATIN 173
L + KDA L D +PL+ +S I+ DVVV+ G TI+
Sbjct: 99 LVVSKDAHLQFVFDRDLYPLVKT-----SWEGMMCWNYSPCIYSYEANDVVVS-GEGTID 152
Query: 174 GQG--EPWWIKYRKKQFNVT-------------------------------------RPY 194
G G E WW K F RP
Sbjct: 153 GGGSNETWWPMNGKANFGYVKGVTKEAQVLGSRARLQKMAEADMPWDERRFGKGYGLRPQ 212
Query: 195 LIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNT 254
LI + + ++IS +TL+ SP W +HP+ NV + G+ I + PN DG +P+ C N
Sbjct: 213 LINFVKGNRIRISGVTLLRSPFWVIHPLLCKNVTVDGVKIWN--EGPNGDGCDPEGCENV 270
Query: 255 RIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGI 313
I++ +GDDC+A+KSG + G P++++IIR C+ D + +GSE+SGG
Sbjct: 271 LIQNTLFHTGDDCIAIKSGRNNDGRFWNQPSKNIIIRN--CVMEDGHGGVVIGSEISGGC 328
Query: 314 KDVRAED--ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-YVFWMTGDYGSHPD 370
+++ AED + + +RIKT RG ++ I +RR+ + K V + DY +
Sbjct: 329 QNIYAEDCEMDSPELDRVLRIKTNNCRGGLIENINMRRVKVGQCKEAVVKINLDY-EPKE 387
Query: 371 P---GFDPKALPTVTGINYRDMVADNVTQSAKLDG-----------IRNDPFTGICISNV 416
P GF+ P V +N D+ + G ++N F GI NV
Sbjct: 388 PCYRGFE----PVVRNVNVEDVTCQKSAYGVLIVGRDSVENVTDIRLKNCSFNGISKENV 443
Query: 417 TIKLTEKPKELQWNCTNIQG 436
K+T K + + ++ + G
Sbjct: 444 --KITGKTRHITFDNVKMDG 461
>gi|376338084|gb|AFB33587.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/137 (46%), Positives = 94/137 (68%)
Query: 272 SGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVR 331
SGWDEYGI G P+ ++IIRR+I + S+ +ALGSEMSGGI+ V A+D+ N++ G+R
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 332 IKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVA 391
IKTA GRG YV+++Y+ +TMK + TG YG HPD +DP ALP + I ++D++
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPXIQRITFKDIIG 120
Query: 392 DNVTQSAKLDGIRNDPF 408
+ + ++GI+N PF
Sbjct: 121 XEIKTAGSVEGIQNAPF 137
>gi|374316328|ref|YP_005062756.1| endopolygalacturonase [Sphaerochaeta pleomorpha str. Grapes]
gi|359351972|gb|AEV29746.1| endopolygalacturonase [Sphaerochaeta pleomorpha str. Grapes]
Length = 454
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 174/379 (45%), Gaps = 57/379 (15%)
Query: 91 GAQLIVPPGKWLTGSFNLTSH-FTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGG 149
G L + PG W TG ++ H ++IHKDA ++ +E ++ +P Y R
Sbjct: 33 GGCLSIGPGTWRTGPITISGHDIEVHIHKDAKIVFIPEEGKY-----IPVYSRWEGINCY 87
Query: 150 RFSSLIFGTNLTDVVVTGGNATINGQGEPWW----------------------------- 180
++ N V + G T+ G G WW
Sbjct: 88 CMHPCLYILNSHRVTIQG-EGTLYGSGHYWWDLSLGKRNLKMEPATETEKRFALLNPGYK 146
Query: 181 -----IKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIR 235
R+ QF RP L++V S ++ + +TL DSP W +HP+YS N++ + L+I+
Sbjct: 147 SQGGGGGGRQSQF--LRPPLVQVKDSSDILLEGITLEDSPFWTLHPLYSRNLVFKNLSIK 204
Query: 236 APIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLIC 295
P ++PNTDGI+ DSC N IE I GDD +A+KSG GI G PT+ + I +
Sbjct: 205 NPKNAPNTDGIDLDSCENVTIEGCVIDVGDDGIALKSGSGPDGILTGRPTKDVRIFQCTV 264
Query: 296 ISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTM 355
+ A+ +GSE + GI +V + T G+RIKT GRG + ++ + +K +
Sbjct: 265 RNAHGGAV-IGSETAAGIHNVEVSNCLFDGTDRGIRIKTRRGRGGKIS--HLSFLGLKMV 321
Query: 356 KYVFWMTGDY----GSHPDPGFDPKAL------PTVTGINYRDMVADNVTQS-AKLDGIR 404
K + +T + GS + F + L P+V+ I D A S A + G+
Sbjct: 322 KNLCPLTINLYYRCGSFSNEDFSLEKLPVCPETPSVSDIRITDCEAVGCLSSIAFIVGLP 381
Query: 405 NDPFTGICISNVTIKLTEK 423
P TG+CI + T L ++
Sbjct: 382 ESPITGLCIEDCTFSLDQE 400
>gi|423294962|ref|ZP_17273089.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
gi|392674542|gb|EIY67988.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
Length = 529
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 155/338 (45%), Gaps = 63/338 (18%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ FG GDG NTKA N AI ++++ GG ++I+P G WLTG L S+ LY +
Sbjct: 52 IEKFGAKGDGLFLNTKAINDAIKDVNQR---GGGKVIIPEGVWLTGPIELLSNVNLYTEQ 108
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+AL+L + D +P++ R R S I N ++ +TG + T +G G+
Sbjct: 109 NALVLFTGDFEAYPIIATSFEGLETR-----RCQSPISARNAENIAITG-HGTFDGNGDC 162
Query: 179 W------------WIKYRK-------------------------KQFNV----------- 190
W W K K FNV
Sbjct: 163 WRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTDEEWA 222
Query: 191 -----TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
RP L+ ++ S V + +T +SPSW +HP+ + + + + P S N D
Sbjct: 223 EIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDA 282
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
I+ +SC N I ++ +GDD + +KSG DE G + G P Q++I++ + +
Sbjct: 283 IDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLH-GHGGFVV 341
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVK 343
GSEMSGG+K++ ED T + T G+R K+ GRG V+
Sbjct: 342 GSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 379
>gi|299148526|ref|ZP_07041588.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513287|gb|EFI37174.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 539
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 155/338 (45%), Gaps = 63/338 (18%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ FG GDG NTKA N AI ++++ GG ++I+P G WLTG L S+ LY +
Sbjct: 62 IEKFGAKGDGLFLNTKAINDAIKDVNQR---GGGKVIIPEGVWLTGPIELLSNVNLYTEQ 118
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+AL+L + D +P++ R R S I N ++ +TG + T +G G+
Sbjct: 119 NALVLFTGDFEAYPIIATSFEGLETR-----RCQSPISARNAENIAITG-HGTFDGNGDC 172
Query: 179 W------------WIKYRK-------------------------KQFNV----------- 190
W W K K FNV
Sbjct: 173 WRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLRGAMACKDFNVPEGINTDEEWA 232
Query: 191 -----TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
RP L+ ++ S V + +T +SPSW +HP+ + + + + P S N D
Sbjct: 233 EIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDA 292
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
I+ +SC N I ++ +GDD + +KSG DE G + G P Q++I++ + +
Sbjct: 293 IDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLH-GHGGFVV 351
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVK 343
GSEMSGG+K++ ED T + T G+R K+ GRG V+
Sbjct: 352 GSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|315650888|ref|ZP_07903931.1| pectin lyase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315486867|gb|EFU77206.1| pectin lyase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 360
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 143/272 (52%), Gaps = 15/272 (5%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG GDG ++ A++ K DG + +P G++L L S+ L+I K
Sbjct: 85 VKDFGAAGDGVKIDSVCIQAAVNACPK---DG--TVYIPKGRYLCTPVFLKSNIDLWIDK 139
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDE---------PGGRFSSLIFGTNLTDVVVTGGN 169
DA+L+ +D ++P+LP + ++E P F++LI G ++ +V++ G
Sbjct: 140 DAVLIGEKDRKKYPILPGMIESSDEKNEYNIGSWEGNPLDCFAALITGLSVENVLIYGEG 199
Query: 170 ATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
G W K KK+ RP + + N+ + L +++SPSW +HP YS N+L
Sbjct: 200 ILDGNAGMLDWWKDAKKKNIAWRPNTVFLHNCKNIAMQGLCIMNSPSWTLHPYYSDNLLF 259
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
TI P +SPNTDG++P+SC N I I GDDC+A+KSG ++ P ++++
Sbjct: 260 LNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCIAIKSGKYYMALRHYKPAKNIV 319
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDI 321
IR I ++ +GSE++ G+ DV E++
Sbjct: 320 IRNSI-FRKGHGSVTIGSEVAAGVYDVSVENV 350
>gi|298482142|ref|ZP_07000330.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271699|gb|EFI13272.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 469
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 191/396 (48%), Gaps = 58/396 (14%)
Query: 54 KHSAVLTDFGGVGDGKTSNT-KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
K + ++TDFG D + + +A N AI S GG +IVP G + TG L S+
Sbjct: 47 KRTFLITDFGAKTDDEANPCHEAINQAILQCS---LSGGGTVIVPKGTFYTGPITLKSNV 103
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
+ + A+L S D+S + P + + G D LI+ +++ +TG I
Sbjct: 104 NFHFEEGAVLKFSTDQSLY--FPAVLTRWEGIDCYNAH--PLIYAYGESNIAITG-KGII 158
Query: 173 NGQG--EPWW-----IKYRKKQFNVT------------------------------RPYL 195
+GQG E WW +KY K+ V RP L
Sbjct: 159 DGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQL 218
Query: 196 IEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTR 255
+ + + I +TL++SP W +HP++ ++++ G+T+ PN DG +P+SC N
Sbjct: 219 LNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNR--GPNGDGCDPESCKNVL 276
Query: 256 IEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKD 315
IE+ +GDDC+A+KSG +E G K +P++++I+R + + + +GSE+SGG ++
Sbjct: 277 IENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCM-MRNGHGGVVIGSEISGGYRN 335
Query: 316 VRAED--ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM-KTMKYVFWMTGDYGSHP--D 370
+ ED + + N +RIKT+ RG ++ +YVR +T+ + + V + Y +
Sbjct: 336 LFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAVLRINLQYENREKCK 395
Query: 371 PGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRND 406
GFD P V ++ +++ + + G+ +D
Sbjct: 396 RGFD----PIVRNVHLKNVTCEKSKLGVLIIGLEDD 427
>gi|383752964|ref|YP_005431867.1| putative polygalacturonase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365016|dbj|BAL81844.1| putative polygalacturonase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 494
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 190/414 (45%), Gaps = 72/414 (17%)
Query: 74 KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPL 133
+A AI ++ A GG ++ +P G W TG+ L SH L++ A L +++S +
Sbjct: 83 QAIQQAIDDM---AQAGGGRVEIPAGIWYTGALELKSHVELHLVAGARLCFIRNKSN--V 137
Query: 134 LPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE-----PWWIKY----- 183
PL Y R FS I+ D+ +TG T++GQ + PW Y
Sbjct: 138 FYPL-RYTRWEGVECMNFSPFIYAEGAEDISITG-QGTLDGQADEFNWMPWKFGYFGEPD 195
Query: 184 ----RKKQF------------------NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHP 221
R++ F + RP I+ S +++I + +++SP W ++P
Sbjct: 196 QEEQRQRLFRAGAEGIPVQQRIFADDVSTLRPPFIQFYNSKDIRIMGVHIVNSPFWEINP 255
Query: 222 VYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKV 281
V NV I+G+ I D N DGI+P+S N IED Y ++GDDC+A+KSG +E G ++
Sbjct: 256 VLCENVWIKGVHIET--DLYNNDGIDPESSRNVLIEDCYFLTGDDCIAIKSGRNEDGRRI 313
Query: 282 GMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRA--EDITAINTQSGVRIKTAVGRG 339
G+PT ++IIR + I LGSE+SGG+ DV A + N +R KT RG
Sbjct: 314 GVPTANVIIRH-NRFANGHGGITLGSEISGGVHDVFATGNHFDSPNLDYPIRFKTNAMRG 372
Query: 340 AYVKEIYVRRMTMKTMKYV------FWMTGDYGSH-PD------PGF--------DPKAL 378
++ +YV+ + + F+ G G + P GF D K
Sbjct: 373 GTLENVYVKDSVVNKARLAVVHADFFYEEGHAGENLPQLDNITLDGFWTAEGGSIDAKYA 432
Query: 379 PTVTGINYRDMVADNVT-QSAKLDGIRNDP----FTGICISNVTIKLTEKPKEL 427
+ G + D + +NVT + KL+G++ + + NVTI +P L
Sbjct: 433 FYLKG--FADALIENVTFRDMKLEGVKGEAVLENIHALAFENVTINGKRQPDRL 484
>gi|383114434|ref|ZP_09935198.1| hypothetical protein BSGG_1394 [Bacteroides sp. D2]
gi|313693859|gb|EFS30694.1| hypothetical protein BSGG_1394 [Bacteroides sp. D2]
Length = 469
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 192/396 (48%), Gaps = 58/396 (14%)
Query: 54 KHSAVLTDFGGVGDGKTSNT-KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
K + ++TDFG D + + +A N AI S GG +IVP G + TG L S+
Sbjct: 47 KRTFLITDFGAKTDDEANPCHEAINQAILQCS---LAGGGTVIVPKGTFYTGPVTLKSNV 103
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
++ + A+L S D+S + P + + G D LI+ +++ +TG I
Sbjct: 104 NFHLEEGAVLKFSTDQSLY--FPAVLTRWEGIDCYNAH--PLIYAYGESNIAITG-KGII 158
Query: 173 NGQG--EPWW-----IKYRKKQFNVT------------------------------RPYL 195
+GQG E WW +KY K+ V RP L
Sbjct: 159 DGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQL 218
Query: 196 IEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTR 255
+ + + I +TL++SP W +HP++ ++++ G+T+ PN DG +P+SC N
Sbjct: 219 LNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNR--GPNGDGCDPESCKNVL 276
Query: 256 IEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKD 315
IE+ +GDDC+A+KSG +E G K +P++++I+R + + + +GSE+SGG ++
Sbjct: 277 IENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCM-MRNGHGGVVIGSEISGGYRN 335
Query: 316 VRAED--ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM-KTMKYVFWMTGDYGSHP--D 370
+ ED + + N +RIKT+ RG ++ +YVR +T+ + + V + Y +
Sbjct: 336 LFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAVLRINLQYENREKCK 395
Query: 371 PGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRND 406
GFD P V ++ +++ + + G+ +D
Sbjct: 396 RGFD----PIVRNVHLKNVTCEKSKLGVLIIGLEDD 427
>gi|440760701|ref|ZP_20939804.1| Polygalacturonase [Pantoea agglomerans 299R]
gi|436425454|gb|ELP23188.1| Polygalacturonase [Pantoea agglomerans 299R]
Length = 430
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 172/366 (46%), Gaps = 36/366 (9%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DF V D + +T+A AI +A G +++P G++LTG+ L S TL + K
Sbjct: 6 IIDFAAVPDATSLSTQAIQRAID-----SASAGDTVLIPAGRFLTGALFLKSEMTLELAK 60
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
DA+LL SQ ++P +P+ G D + + + N V G+ T +GQG
Sbjct: 61 DAMLLGSQRLEDYP---DIPTRVAGIDMV---WPAAMLNINHCRNVTVCGSGTFDGQGAV 114
Query: 179 WWIK-------------YRKK------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNV 219
WW K Y ++ ++ RP + V S+ V + + T DS WN+
Sbjct: 115 WWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNVVVYESECVTLEDFTSQDSGFWNL 174
Query: 220 HPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGI 279
H YS V +Q L + P+TDGI+ D+ R+E + DD + VKSG
Sbjct: 175 HVCYSKQVNLQRLRVMNAT-GPSTDGIDIDTSQLVRVESCTVSCNDDNICVKSGRGAEAQ 233
Query: 280 KVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG 339
++G + +IIR C + I LGSE SGGI++V E T G RIK+A RG
Sbjct: 234 QLGRTARDIIIRD--CTLLKGSGITLGSETSGGIENVIIEHNRFSGTGVGFRIKSARNRG 291
Query: 340 AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAK 399
++K I VR + M+ + Y F + ++ P + + T ++R + A VT A
Sbjct: 292 GWIKNIVVRHLKMEDVCYPFMLQLNW--FPQYSYSEQPADTKQPPHWRKL-ASGVTGDAG 348
Query: 400 LDGIRN 405
L + N
Sbjct: 349 LTRVEN 354
>gi|407791858|ref|ZP_11138936.1| polygalacturonase [Gallaecimonas xiamenensis 3-C-1]
gi|407198911|gb|EKE68937.1| polygalacturonase [Gallaecimonas xiamenensis 3-C-1]
Length = 495
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 195/411 (47%), Gaps = 56/411 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
++DFG V GK N+ + + ++ AA GG ++ VP G++LTG+ +L S+ L++ K
Sbjct: 75 ISDFGAVPGGKVLNS---DAIAAAIAACAAAGGGRVRVPQGRFLTGAIHLKSNVNLHLDK 131
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE- 177
A+L+ S + + LP + + G + G S LI+ ++ VTG G +
Sbjct: 132 GAVLVFSPNPDHY--LPAVFTRWEGMEMMG--LSPLIYAYGQRNIAVTGQGVLDGGADDN 187
Query: 178 PWW---------------IKYRKK----------------------QFNVTRPYLIEVMF 200
WW I +K Q + RP I+
Sbjct: 188 TWWPWKGPHPEGHWRQDPIAQTQKAARDKLQQEVLAGTDPRTRLHGQGSFLRPAFIQPYL 247
Query: 201 SDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNY 260
NV I +TL++SP W +HPV +V ++G+T R+ PN DG +P+ C + IE
Sbjct: 248 CQNVLIEGVTLVNSPFWLLHPVLCQSVTVRGVTCRS--HGPNNDGCDPECCDHVVIEGCT 305
Query: 261 IVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRAE 319
+GDDC+A+KSG +E G +VG ++L++R C D + LGSE+SGG+ +V +
Sbjct: 306 FDTGDDCIAIKSGRNEDGRRVGQACRNLVVRN--CQMKDGHGGLVLGSEISGGVYNVFLD 363
Query: 320 D--ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKA 377
+ + + + RIKT RG ++ I +R + + +K + Y + G + +
Sbjct: 364 NCQMDSPELERAFRIKTNARRGGTIEGIRIRNLRVGEVKDAVSINFFY----EEGQEGRF 419
Query: 378 LPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQ 428
LP V I+ ++V + ++ L G + P G+ +SN I P L+
Sbjct: 420 LPEVRDIHIDNLVVRSAQRAFYLRGFASAPIEGVTLSNCRIDKVAAPSVLE 470
>gi|261406869|ref|YP_003243110.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283332|gb|ACX65303.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 475
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 125/448 (27%), Positives = 192/448 (42%), Gaps = 68/448 (15%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG +GDG + NT+A + + A+ GG +++P G WLTG L S L+
Sbjct: 31 IADFGAIGDGLSDNTEA---FAAAIEACASQGGGTVLIPAGLWLTGPIRLQSGIRLHADA 87
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
AL+ S + ++PL+ SY R R I+G +L +V +TG +G GE
Sbjct: 88 GALVHFSANRDDYPLI--RTSYEGLRTV---RCMPAIYGEDLENVAITG-TGIFDGSGEA 141
Query: 179 ----------------------------WW-----------IKYRKKQFNVT-------- 191
WW +K Q NV
Sbjct: 142 WRPVKRMKLTEGQWKQLIQSGGYEEGGVWWPTEQSLKSAALVKSLIAQ-NVQDPSAFEPA 200
Query: 192 ----RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGIN 247
RP L+++ V T +SP+WNVHP +V I+ ++IR S N DG++
Sbjct: 201 RDHLRPTLVQLDRCRKVLFDGPTFRNSPAWNVHPWLCEHVTIRNVSIRNQWHSQNGDGLD 260
Query: 248 PDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGS 307
DSC I D+ GDD + +KSG D G + +PT+++ IR +GS
Sbjct: 261 LDSCRYANIYDSVFDVGDDAICIKSGKDADGRALAVPTEYVTIRNCQVFH-GHGGFVIGS 319
Query: 308 EMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGS 367
EMSG ++++ D I T +G+R K+ GRG V+ IY+R + MK + + Y S
Sbjct: 320 EMSGDVRNIAITDCVFIGTDAGLRFKSTRGRGGTVERIYIRGVLMKEIAKEAIIFSSYYS 379
Query: 368 HPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKEL 427
+ DP A+ T + +RD + T + + I N+ +
Sbjct: 380 GKNNTDDPVAVTEETPV-FRDFHISDTTCIGAHTALHIKGLPEMPIENIVFDRVQLTARN 438
Query: 428 QWNCTNIQGITSRVTPQACELLPKK-EP 454
CTN + IT R T ++LP+ EP
Sbjct: 439 GATCTNARNITFRQT----KVLPENGEP 462
>gi|261880664|ref|ZP_06007091.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270332617|gb|EFA43403.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 851
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 127/458 (27%), Positives = 208/458 (45%), Gaps = 79/458 (17%)
Query: 17 IKILSTLLT-----LGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTS 71
+K LSTLL L L+ E + +I R++S +T FG +
Sbjct: 1 MKQLSTLLVALFLPLFALAQSWDEAMYKQIEQSIRMPQFADREYS--ITQFGASPKASAA 58
Query: 72 -NTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESE 130
N KA N AI SK GG +++VP G+WLTG+ + SH L + + A L + +
Sbjct: 59 KNQKAINRAILMCSK---KGGGRIVVPRGEWLTGAIRMQSHVNLVVEEGATLKFAFEPEL 115
Query: 131 WPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG-GNATINGQGEPWW--------- 180
+PL+ G G +S I+ TDV +TG G NG + WW
Sbjct: 116 YPLVKTSWE-GIG----CWNYSPCIYAYQATDVALTGKGTIDGNGSKQTWWPMCGAPRYG 170
Query: 181 -------------------------IKYRKKQFNV---TRPYLIEVMFSDNVQISNLTLI 212
+ + +++F + R L+ + SD + I +L L+
Sbjct: 171 FVKGETKEAQNLGSRAQLLKYAENDVPWDQRKFGMGKGLRSQLVNFVESDGILIKDLHLV 230
Query: 213 DSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKS 272
+SP W +HP+ S N+ + G+ ++ D PN DG +P++C I++ +GDDC+A+KS
Sbjct: 231 NSPFWVIHPLLSKNITVDGVFVQN--DGPNGDGCDPEACDGVLIQNCTFDTGDDCIAIKS 288
Query: 273 GWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRAED--ITAINTQSG 329
G + G P+Q++IIR C D + +GSE+SGG ++V AED + + +
Sbjct: 289 GRNNDGRLWNKPSQNIIIRN--CKMADGHGGVVIGSEISGGCRNVFAEDCYMDSPHLDRV 346
Query: 330 VRIKTAVGRGAYVKEIYVRRMTM-KTMKYVFWMTGDYGSHPD--PGFDP----------- 375
+RIKT RG ++ I +R +T+ + + V + DY + GF+P
Sbjct: 347 LRIKTNNCRGGLIENINMRNVTVGQCNEAVLRINLDYEPREECYRGFEPTVRKVYMENVT 406
Query: 376 ----KALPTVTGINYRDMVADNVTQSAKLDGIRNDPFT 409
K + G+N + V D ++ K DG+ P +
Sbjct: 407 SKESKYGVQIIGLNNIENVYDITVKNCKFDGVSKAPVS 444
>gi|423301929|ref|ZP_17279952.1| hypothetical protein HMPREF1057_03093 [Bacteroides finegoldii
CL09T03C10]
gi|408471020|gb|EKJ89552.1| hypothetical protein HMPREF1057_03093 [Bacteroides finegoldii
CL09T03C10]
Length = 546
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 154/338 (45%), Gaps = 63/338 (18%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ FG GDG NTKA N AI +++++ GG ++I+P G WLTG L S+ LY +
Sbjct: 61 IEKFGAKGDGLFLNTKAINDAIKDVNQH---GGGKVIIPEGIWLTGPIELLSNVNLYTER 117
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+AL+L + D +P++ R R S I N ++ +TG T +G G+
Sbjct: 118 NALVLFTGDFEAYPIIATSFEGLETR-----RCQSPISARNAENIAITG-YGTFDGNGDC 171
Query: 179 W------------WIKYRK-------------------------KQFNV----------- 190
W W K K FNV
Sbjct: 172 WRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTPGSLKGAMACKDFNVPEGINTDEEWN 231
Query: 191 -----TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
RP L+ + S + + +T +SPSW +HP+ + + + + P S N D
Sbjct: 232 EIRPWLRPVLLSIAKSKKILLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDA 291
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
I+ +SC N I ++ +GDD + +KSG DE G + G P Q++I++ + +
Sbjct: 292 IDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLH-GHGGFVV 350
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVK 343
GSEMSGG+K++ ED T + T G+R K+ GRG V+
Sbjct: 351 GSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 388
>gi|29349531|ref|NP_813034.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341440|gb|AAO79228.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 528
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 188/424 (44%), Gaps = 70/424 (16%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG + DG T NT+A N AI +S + GG ++I+P G WLTG L S+ LY K
Sbjct: 61 IRDFGALSDGVTLNTEAINNAIKAVS---SKGGGKVIIPEGLWLTGPVVLLSNVNLYAEK 117
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATING---- 174
+AL++ S D S +P+ + + G D R S I N ++ +TG N +G
Sbjct: 118 NALIVFSSDTSLYPI---IDTSFEGLDTK--RCQSPISAMNAENIAITG-NGVFDGAGDR 171
Query: 175 --------------------------QGEPWW------------IKYRKKQFNVT----- 191
G+ W+ Q +T
Sbjct: 172 WRPVKKDKMTERQWKNLVSSGGKVDENGKVWYPDAGALKASVLMTGQNNGQKEITDEEWT 231
Query: 192 ------RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
RP ++ ++ S + + +T +SP W +HP+ ++ + + + P S N D
Sbjct: 232 YMKSWLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWYSQNGDA 291
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
++ +SC N + + + +GDD + +KSG DE G + G P +++II+ + +
Sbjct: 292 LDVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKNNTVLH-GHGGFVI 350
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY------VF 359
GSEMSGG+++V + + T G+R K+ GRG V+ I++ + M + ++
Sbjct: 351 GSEMSGGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINMIDISNDALTMDLY 410
Query: 360 WMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
+ D+ P P + + P I +++ ++ +G+ P I I N+T+
Sbjct: 411 YAVNDFPETPIPDVNEET-PVFRNIYISNVLCRGAERAVYFNGLPEMPLKNIFIKNMTVT 469
Query: 420 LTEK 423
+K
Sbjct: 470 NAKK 473
>gi|299148506|ref|ZP_07041568.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|423288903|ref|ZP_17267754.1| hypothetical protein HMPREF1069_02797 [Bacteroides ovatus
CL02T12C04]
gi|298513267|gb|EFI37154.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|392668993|gb|EIY62485.1| hypothetical protein HMPREF1069_02797 [Bacteroides ovatus
CL02T12C04]
Length = 469
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 192/396 (48%), Gaps = 58/396 (14%)
Query: 54 KHSAVLTDFGGVGDGKTSNT-KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
K + ++TDFG D + + +A N AI S GG +IVP G + TG L S+
Sbjct: 47 KRTFLITDFGAKTDDEANPCHEAINQAILQCS---LSGGGTVIVPKGTFYTGPITLKSNV 103
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
++ + A+L S D+S + P + + G D LI+ +++ +TG I
Sbjct: 104 NFHLEEGAVLKFSTDQSLY--FPAVLTRWEGIDCYNAH--PLIYAYGESNIAITG-KGII 158
Query: 173 NGQG--EPWW-----IKYRKKQFNVT------------------------------RPYL 195
+GQG E WW +KY K+ V RP L
Sbjct: 159 DGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQL 218
Query: 196 IEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTR 255
+ + + I +TL++SP W +HP++ ++++ G+T+ PN DG +P+SC N
Sbjct: 219 LNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNR--GPNGDGCDPESCKNVL 276
Query: 256 IEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKD 315
IE+ +GDDC+A+KSG +E G K +P++++I+R + + + +GSE+SGG ++
Sbjct: 277 IENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCM-MRNGHGGVVIGSEISGGYRN 335
Query: 316 VRAED--ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM-KTMKYVFWMTGDYGSHP--D 370
+ ED + + N +RIKT+ RG ++ ++VR +T+ + + V + Y +
Sbjct: 336 LFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAVLRINLQYENREKCK 395
Query: 371 PGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRND 406
GFD P V ++ +++ + + G+ +D
Sbjct: 396 RGFD----PIVRNVHLKNVTCEKSKLGVLIIGLEDD 427
>gi|336414764|ref|ZP_08595108.1| hypothetical protein HMPREF1017_02216 [Bacteroides ovatus
3_8_47FAA]
gi|335942134|gb|EGN03982.1| hypothetical protein HMPREF1017_02216 [Bacteroides ovatus
3_8_47FAA]
Length = 469
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 192/396 (48%), Gaps = 58/396 (14%)
Query: 54 KHSAVLTDFGGVGDGKTSNT-KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
K + ++TDFG D + + +A N AI S GG +IVP G + TG L S+
Sbjct: 47 KRTFLITDFGAKTDDEANPCHEAINQAILQCS---LSGGGTVIVPKGTFYTGPITLKSNV 103
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
++ + A+L S D+S + P + + G D LI+ +++ +TG I
Sbjct: 104 NFHLEEGAVLKFSTDQSLY--FPAVLTRWEGIDCYNAH--PLIYAYGESNIAITG-KGII 158
Query: 173 NGQG--EPWW-----IKYRKKQFNVT------------------------------RPYL 195
+GQG E WW +KY K+ V RP L
Sbjct: 159 DGQGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQL 218
Query: 196 IEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTR 255
+ + + I +TL++SP W +HP++ ++++ G+T+ PN DG +P+SC N
Sbjct: 219 LNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNR--GPNGDGCDPESCKNVL 276
Query: 256 IEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKD 315
IE+ +GDDC+A+KSG +E G K +P++++I+R + + + +GSE+SGG ++
Sbjct: 277 IENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCM-MRNGHGGVVIGSEISGGYRN 335
Query: 316 VRAED--ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM-KTMKYVFWMTGDYGSHP--D 370
+ ED + + N +RIKT+ RG ++ ++VR +T+ + + V + Y +
Sbjct: 336 LFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAVLRINLQYENREKCK 395
Query: 371 PGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRND 406
GFD P V ++ +++ + + G+ +D
Sbjct: 396 RGFD----PIVRNVHLKNVTCEKSKLGVLIIGLEDD 427
>gi|300728468|ref|ZP_07061828.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299774269|gb|EFI70901.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 466
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 198/433 (45%), Gaps = 71/433 (16%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ D GG GDG TSNT+AF AIS LSK GG L VP G +LTG + + L++ K
Sbjct: 49 ILDCGGKGDGITSNTEAFRKAISKLSKL---GGGHLNVPAGIYLTGLISFKDNIDLHLEK 105
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLT---DVVVTGGNATINGQ 175
+A+++ S+D+ E+ ++E G + G N + ++ +TG I+G
Sbjct: 106 NAIIVFSEDKKEFI-----------KEENGVKDDKATPGINASKRKNISITG-EGIIDGN 153
Query: 176 GEPW-----------------------------WIKYRKKQFN----------VTRPYLI 196
GE W W + K F+ R +LI
Sbjct: 154 GEWWRPVKRSKVSNTEWNDFKAMGGTESAKGDLWYPFNLKHFDNIAATPEAQEKMRTHLI 213
Query: 197 EVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRI 256
+ +NV I +T+ +SP +++ P NV+I G+T+R P ++ N D I+ +CTN I
Sbjct: 214 RLTDCENVLIQGVTVENSPKFHIVPQRCKNVIIDGVTVRCPWNAQNGDAIDIGNCTNVLI 273
Query: 257 EDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDV 316
+N I +GDD + +K G ++ G P ++ I+ I +GSE SGG+K++
Sbjct: 274 VNNVIDAGDDGICMKGGAGAKALEYG-PCLNINIQDNIVYHA-HGGFVIGSEFSGGMKNI 331
Query: 317 RAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTM--KYVFWMTGDYGSH--PDPG 372
+ T T + +R K++VGRG ++IY+ + M + + + + T + +H G
Sbjct: 332 YVHNNTFSGTDTELRFKSSVGRGGTTEDIYISNIYMTDIDNQAIVFETTYFDNHVGAKKG 391
Query: 373 FDPKAL---PTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQW 429
P + P T I+ +D+V G + GI I N I E +++
Sbjct: 392 AQPTKVEFAPNFTDIHMKDIVVRGCKTGIAAHGEKG-MIHGITIENANIFYHETAQDIDA 450
Query: 430 NC----TNIQGIT 438
N TN+ +T
Sbjct: 451 NSDITLTNVNFVT 463
>gi|308185704|ref|YP_003929835.1| polygalacturonase [Pantoea vagans C9-1]
gi|308056214|gb|ADO08386.1| Putative polygalacturonase precursor [Pantoea vagans C9-1]
Length = 352
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 171/361 (47%), Gaps = 36/361 (9%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DF V D + +T+A AI +A G +++P G++LTG+ L S TL + K
Sbjct: 6 IIDFAAVPDATSLSTQAIQRAID-----SASAGDTVLIPAGRFLTGALFLKSEMTLELAK 60
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
DA+LL SQ ++P +P+ G D + + + N V G+ T++GQG
Sbjct: 61 DAVLLGSQRLEDYP---DIPTRVAGIDMV---WPAAMLNINHCRNVTVCGSGTLDGQGAV 114
Query: 179 WWIK-------------YRKK------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNV 219
WW K Y ++ ++ RP + V S+ V + + T DS WN+
Sbjct: 115 WWHKFWGDDETSGMLADYTRRGLRWVVDYDCRRPRNVVVYESECVTLEDFTSQDSGFWNL 174
Query: 220 HPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGI 279
H YS V +Q L + P+TDGI+ DS R+E + DD + VKSG
Sbjct: 175 HVCYSKQVNLQRLRVMNAT-GPSTDGIDIDSSQLVRVEGCTVSCNDDNICVKSGRGAEAQ 233
Query: 280 KVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG 339
++G + +IIR C + I LGSE SGGI++V E T G RIK+A RG
Sbjct: 234 QLGRTARDIIIRD--CTLLKGSGITLGSETSGGIENVIIEHNRFSGTGVGFRIKSARNRG 291
Query: 340 AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAK 399
++K I VR + M+ + Y F + ++ P + + T ++R + A VT A
Sbjct: 292 GWIKNIVVRHLKMEDVCYPFMLQLNW--FPQYSYSEQPADTEQPSHWRKL-ASGVTGDAG 348
Query: 400 L 400
L
Sbjct: 349 L 349
>gi|431798726|ref|YP_007225630.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789491|gb|AGA79620.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 475
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 168/337 (49%), Gaps = 51/337 (15%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ ++G G+ +T A AI ++ GG +++VP G +LTG+ +L S+ L++ +
Sbjct: 61 IEEYGAEAGGEVLSTDAIAAAIKACNEA---GGGRVVVPKGVYLTGAVHLLSNVNLHLEE 117
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG-- 176
A L S++ ++ LP + S G + +S I+ ++ +T GN T++G
Sbjct: 118 GATLRFSRNPKDY--LPLVRSRWEGMELM--NYSPFIYAYQQENIAIT-GNGTLDGHADM 172
Query: 177 EPWWIKYRKKQF----------------------------------NVTRPYLIEVMFSD 202
E WW K F + RP ++
Sbjct: 173 EHWWPWCGAKHFGWKEGMGRQNPSRKLLHEMVHDRVPLEERIFGEGHFMRPQFVQPFECK 232
Query: 203 NVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIV 262
NV I ++ LI++P WN+HPV NV ++ + I PN DG +P++C N I+D Y
Sbjct: 233 NVLIQDVKLINAPMWNLHPVLCENVTVERVKIETL--GPNNDGCDPEACKNVLIKDCYFD 290
Query: 263 SGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLIC-ISPDSAAIALGSEMSGGIKDVRAEDI 321
+GDDC+A+KSG +E G G+P++++II C + + +GSE+SGG ++V A+++
Sbjct: 291 TGDDCIAIKSGRNEDGRIPGIPSENIIIEG--CEMKEGHGGVVIGSEISGGARNVFAQNL 348
Query: 322 T--AINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK 356
+ N +RIKT+ RG V+ IY+R + + T +
Sbjct: 349 VMDSPNLDRVLRIKTSSKRGGTVENIYMRDVVVGTYR 385
>gi|410634542|ref|ZP_11345177.1| exo-poly-alpha-D-galacturonosidase [Glaciecola arctica BSs20135]
gi|410145928|dbj|GAC22044.1| exo-poly-alpha-D-galacturonosidase [Glaciecola arctica BSs20135]
Length = 477
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 199/433 (45%), Gaps = 71/433 (16%)
Query: 43 YTIEFQALNCRK---------HSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQ 93
YT + QAL R ++ +T+ G + +++A I+ K + GG
Sbjct: 37 YTYQGQALAIRNRIIAPSFPDYAMSITELGAKPGFENDSSEAIRQTIA---KVVSAGGGT 93
Query: 94 LIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSS 153
++VP G++ TG +L S+ +I K A+L + + P + + G + G S
Sbjct: 94 VVVPAGEFYTGPVHLESNINFHIAKGAVLHFYPEPERYK--PYVFTRWEGTELMG--LSP 149
Query: 154 LIFGTNLTDVVVTG-GNATINGQGEPWW-------------------------------- 180
LI+ T+V +TG G G + WW
Sbjct: 150 LIYAYKKTNVAITGKGILEGGGSEQHWWPWKGPWKKSTWGDDPIENQKFTRDVLREMAEQ 209
Query: 181 ---IKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAP 237
+ R + N RP I+ NV I +T+ +SP W V+PV NV ++ I
Sbjct: 210 ELPVAQRVFKNNYLRPPFIQPYACINVLIEGVTIKNSPFWLVNPVLCKNVTVR--NIHCD 267
Query: 238 IDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
PN+DG +P++CT+ IE+ +GDDC+A+KSG + G +VG P ++++I S
Sbjct: 268 SHGPNSDGCDPEACTDVLIENCIFDTGDDCIAIKSGRNADGRRVGQPCENILINNCQMRS 327
Query: 298 PDSAAIALGSEMSGGIKDVRAE--DITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTM 355
+ +GSE+SGG++++ A+ ++++ + G+RIKT RG ++K + R + + +
Sbjct: 328 -GHGGVVIGSEISGGVRNLYAQNCEMSSPDLDRGIRIKTNSIRGGHLKNLNYRDIRIGQV 386
Query: 356 KYV-----FWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTG 410
K ++ GD G K P + IN ++ ++ T++ L G + P TG
Sbjct: 387 KEAVVINFYYEEGDVG---------KFTPVLEDINIENLYVEHATRAFSLRGYPHTPITG 437
Query: 411 ICISNVTIKLTEK 423
+ I N+TI +K
Sbjct: 438 VSIKNLTILKVDK 450
>gi|160887026|ref|ZP_02068029.1| hypothetical protein BACOVA_05040 [Bacteroides ovatus ATCC 8483]
gi|423288884|ref|ZP_17267735.1| hypothetical protein HMPREF1069_02778 [Bacteroides ovatus
CL02T12C04]
gi|156107437|gb|EDO09182.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|295086775|emb|CBK68298.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|392668974|gb|EIY62466.1| hypothetical protein HMPREF1069_02778 [Bacteroides ovatus
CL02T12C04]
Length = 539
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 155/338 (45%), Gaps = 63/338 (18%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ FG GDG NTKA N AI ++++ GG ++I+P G WLTG L S+ LY +
Sbjct: 62 IEKFGAKGDGLFLNTKAINDAIKDVNQR---GGGKVIIPEGVWLTGPIELLSNVNLYTEQ 118
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+AL+L + D +P++ R R S I N ++ +TG + T +G G+
Sbjct: 119 NALVLFTGDFEAYPIIATSFEGLETR-----RCQSPISVRNAENIAITG-HGTFDGNGDC 172
Query: 179 W------------WIKYRK-------------------------KQFNV----------- 190
W W K K FNV
Sbjct: 173 WRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLRGAMACKDFNVPEGINTDEEWA 232
Query: 191 -----TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
RP L+ ++ S V + +T +SPSW +HP+ + + + + P S N D
Sbjct: 233 EIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDA 292
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
I+ +SC N I ++ +GDD + +KSG DE G + G P Q++I++ + +
Sbjct: 293 IDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLH-GHGGFVV 351
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVK 343
GSEMSGG+K++ ED T + T G+R K+ GRG V+
Sbjct: 352 GSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|153807509|ref|ZP_01960177.1| hypothetical protein BACCAC_01789 [Bacteroides caccae ATCC 43185]
gi|149129871|gb|EDM21083.1| polygalacturonase (pectinase) [Bacteroides caccae ATCC 43185]
Length = 539
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 154/338 (45%), Gaps = 63/338 (18%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ FG GDG NTKA N AI ++++ GG ++I+P G WLTG L S+ LY +
Sbjct: 62 IEKFGAKGDGLFLNTKAINDAIKDVNQR---GGGKVIIPEGIWLTGPIELLSNVNLYTEQ 118
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+AL+L + D +P++ R R S I N ++ VTG T +G G+
Sbjct: 119 NALVLFTGDFEAYPIIDTSFEGLETR-----RCQSPISARNAENIAVTG-YGTFDGNGDC 172
Query: 179 W------------WIKYRK-------------------------KQFNV----------- 190
W W K K FNV
Sbjct: 173 WRPVKKEKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTDEEWA 232
Query: 191 -----TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
RP L+ ++ S V + +T +SPSW +HP+ + + + + P S N D
Sbjct: 233 EIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDA 292
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
I+ +SC N I ++ +GDD + +KSG DE G + G P Q++I++ + +
Sbjct: 293 IDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLH-GHGGFVV 351
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVK 343
GSEMSGG+K++ ED T + T G+R K+ GRG V+
Sbjct: 352 GSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|255036065|ref|YP_003086686.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254948821|gb|ACT93521.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 455
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 194/424 (45%), Gaps = 60/424 (14%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R ++TDFG V K + A AI ++ GG +++VP G+WLTG +L S+
Sbjct: 50 RVKRFLITDFGAVAGDKEKISGAIRQAIDAANQ---AGGGKVVVPAGEWLTGKVHLKSNV 106
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
L++ K A+LL S+ ++ LP + S G + +S LI+ +V +TG +
Sbjct: 107 NLHLDKGAVLLFSEKPEDY--LPAVHSSWEGIE--CYNYSPLIYAYQCKNVAITG-EGEV 161
Query: 173 NGQGEPW--W-------IKYRKKQFNVT------------------RPYLIEVMFSDNVQ 205
+ E W W ++ K+ +N+ RP I+ +NV
Sbjct: 162 RAKMEVWKEWFARPKPHMESIKRLYNLAQDYTPVEQRQMVNDTAHLRPQFIQFNRCENVL 221
Query: 206 ISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGD 265
+ T+ +SP W +HP NV+I L + A N DG++P+ N I D GD
Sbjct: 222 MEGFTVTNSPFWTIHPYLCKNVVISRLKVYA--HGHNNDGVDPEMSQNVFITDCVFDQGD 279
Query: 266 DCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN 325
D +A+KSG + G ++ P+++++IR L + +A+GSE+SGGI++V DI+
Sbjct: 280 DAIAIKSGRNPEGWRLKTPSKNIVIRNL-TVKNGHQLVAIGSELSGGIENV---DISQCQ 335
Query: 326 TQSGVR------IKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKAL- 378
G + IKT G YVK IY +T + G G D + + L
Sbjct: 336 VVDGAKLNHLLFIKTNERMGGYVKNIYASNLTAGKID-----LGVLGIETDVLYQWRTLV 390
Query: 379 PT-------VTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNC 431
PT ++ I ++ +V +++ G + P + + N+T ++ KE+ N
Sbjct: 391 PTKIRKLTPISDIYLSNISVKDVKFESRILGQKELPVKNVSMKNITTGKVQEQKEIHENV 450
Query: 432 TNIQ 435
+ Q
Sbjct: 451 LDFQ 454
>gi|294815999|ref|ZP_06774642.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
gi|326444342|ref|ZP_08219076.1| glycoside hydrolase family 28 [Streptomyces clavuligerus ATCC
27064]
gi|294328598|gb|EFG10241.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
Length = 479
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 203/434 (46%), Gaps = 69/434 (15%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+T +G VGDG T NT A AI+ + GG ++VP G+++TG+ +L L++ +
Sbjct: 70 ITQYGAVGDGTTKNTAAIRAAITACHRA---GGGHVLVPAGRFVTGAIHLRGGVDLHVSE 126
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE- 177
+L S D +++ LP + + G + +S ++ N V VTG ++GQ
Sbjct: 127 GGILAFSPDPADY--LPAVLTRWEGTE--CWNYSPFVYAHNQRGVAVTG-EGILDGQARR 181
Query: 178 -PWWIKYRKKQF--------------------------NVTRPYLIEVMFSDNVQISNLT 210
PW YR + RP +++ +V IS+LT
Sbjct: 182 GPWESWYRTGTLQGPDQRLLRKMGSEGVPVKDRLFGAGHYLRPKMVQFNRCRDVLISDLT 241
Query: 211 LIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAV 270
++D P W VHPV +NV ++ +T+ + + NTDG++P++ I + DDCVAV
Sbjct: 242 IVDPPMWTVHPVLCTNVTVRNITVESLLH--NTDGVDPEASRLVHITGCRFNTNDDCVAV 299
Query: 271 KSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN----- 325
K+G DE G +VG+P++ ++++ S I +GSEMSGG++ V AED IN
Sbjct: 300 KAGRDEDGHRVGVPSEDIVVQDCD-FSGRWGGITVGSEMSGGVRRVFAEDCR-INPPDFP 357
Query: 326 ----TQSGVRIKTAVGRGAYVKEIYVRRMTMKTM-KYVFWMTGDY-----GSHPDPGFDP 375
+ V +K + RG +V +YVRR + + + + V ++ DY G+HP
Sbjct: 358 GHYPVKYPVYLKASKKRGGFVDGVYVRRFSGQAVEREVLFVNMDYNGGEGGTHP------ 411
Query: 376 KALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQ 435
+V I+ D +L G+ D G+ +++ P + + +
Sbjct: 412 ---VSVRDIHLSHCRIDGARAVLRLVGLETDRLRGVHLAHCDFTGVRGPDAVAFT----E 464
Query: 436 GIT-SRVTPQACEL 448
G+T RVT E+
Sbjct: 465 GLTRRRVTVNGVEV 478
>gi|329894082|ref|ZP_08270067.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
gi|328923254|gb|EGG30574.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
Length = 487
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 186/398 (46%), Gaps = 55/398 (13%)
Query: 58 VLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
V+ +FG V DG + A AI + + GG ++ G +LTG +L S L++
Sbjct: 62 VVENFGAVSDGVFDCSDAIQKAIEHAE---SQGGGTVVFTQGVYLTGPIHLRSKIALHLE 118
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
KDA L D + + LP + + G + G FS LI+ L DV +TG T++G
Sbjct: 119 KDATLKFVTDPNRY--LPAVFTRWEGMELMG--FSPLIYAYGLNDVAITG-QGTLDGGAN 173
Query: 178 -----PWWIKYRKKQFNV--------TRPYLI----------EVMFSD------------ 202
PW +++ +++ R YL E +F+D
Sbjct: 174 DQTWWPWKGPHKEAHWDLIEGQDQKPARDYLFAMAERGVPPRERVFADGGFLRPPFLQFY 233
Query: 203 ---NVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDN 259
+ + + + ++P W +HPV S +V I+G+ ++ PN+DG +P+SC IED
Sbjct: 234 DCQRILVEGIKITNAPFWLIHPVLSRDVTIRGVHCQSY--GPNSDGCDPESCERVVIEDC 291
Query: 260 YIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAE 319
+GDDC+A+KSG + G ++G+P + ++++ + + +GSE+SGG+ +V
Sbjct: 292 VFDTGDDCIALKSGRNADGRRIGVPCKDVVVQNC-HMKEGHGGVVIGSEISGGVANVHVR 350
Query: 320 DIT--AINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKA 377
T + + + +RIKT RG ++ + ++T+ ++K VF + Y + G K
Sbjct: 351 HCTMDSPHLERAIRIKTNAQRGGLIEHLRYSKITIGSVKDVFVINFYY----EEGDRGKW 406
Query: 378 LPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISN 415
+P V I D+ + L G P T + + N
Sbjct: 407 MPLVRDIEITDLTVAKAQRVFNLRGFPQSPITDVSLRN 444
>gi|293369380|ref|ZP_06615965.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336406828|ref|ZP_08587475.1| hypothetical protein HMPREF0127_04788 [Bacteroides sp. 1_1_30]
gi|292635547|gb|EFF54054.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335933190|gb|EGM95200.1| hypothetical protein HMPREF0127_04788 [Bacteroides sp. 1_1_30]
Length = 529
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 155/338 (45%), Gaps = 63/338 (18%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ FG GDG NTKA N AI ++++ GG ++I+P G WLTG L S+ LY +
Sbjct: 52 IEKFGAKGDGLFLNTKAINDAIKDVNQR---GGGKVIIPEGVWLTGPIELLSNVNLYTEQ 108
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+AL+L + D +P++ R R S I N ++ +TG + T +G G+
Sbjct: 109 NALVLFTGDFEAYPIIATSFEGLETR-----RCQSPISVRNAENIAITG-HGTFDGNGDC 162
Query: 179 W------------WIKYRK-------------------------KQFNV----------- 190
W W K K FNV
Sbjct: 163 WRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLRGAMACKDFNVPEGINTDEEWA 222
Query: 191 -----TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
RP L+ ++ S V + +T +SPSW +HP+ + + + + P S N D
Sbjct: 223 EIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDA 282
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
I+ +SC N I ++ +GDD + +KSG DE G + G P Q++I++ + +
Sbjct: 283 IDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLH-GHGGFVV 341
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVK 343
GSEMSGG+K++ ED T + T G+R K+ GRG V+
Sbjct: 342 GSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 379
>gi|298482165|ref|ZP_07000353.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271722|gb|EFI13295.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 539
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 153/338 (45%), Gaps = 63/338 (18%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ FG GDG NTKA N AI +++ GG ++I+P G WLTG L S+ LY +
Sbjct: 62 IEKFGAKGDGLYLNTKAINDAIKEVNQR---GGGKVIIPEGIWLTGPIELLSNVNLYTEQ 118
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+AL+L + D +P++ R R S I N ++ +TG T +G G+
Sbjct: 119 NALVLFTGDFEAYPIIATSFEGLETR-----RCQSPISARNAENIAITG-YGTFDGNGDC 172
Query: 179 W------------WIKYRK-------------------------KQFNV----------- 190
W W K K FNV
Sbjct: 173 WRPVKKGKLTASQWKKLVSSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTDEEWA 232
Query: 191 -----TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
RP L+ ++ S V + +T +SPSW +HP+ + + + + P S N D
Sbjct: 233 EIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDA 292
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
I+ +SC N I ++ +GDD + +KSG DE G + G P Q++I++ + +
Sbjct: 293 IDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLH-GHGGFVV 351
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVK 343
GSEMSGG+K++ ED T + T G+R K+ GRG V+
Sbjct: 352 GSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|393786780|ref|ZP_10374912.1| hypothetical protein HMPREF1068_01192 [Bacteroides nordii
CL02T12C05]
gi|392658015|gb|EIY51645.1| hypothetical protein HMPREF1068_01192 [Bacteroides nordii
CL02T12C05]
Length = 536
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 155/342 (45%), Gaps = 63/342 (18%)
Query: 55 HSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTL 114
++ + FG DGK NTKA N AI + A GG ++++P G WLTG L S+ L
Sbjct: 55 YTISIVAFGAQNDGKFLNTKAINEAIKAVH---AKGGGKVVIPEGLWLTGPIELLSNVNL 111
Query: 115 YIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATING 174
Y ++A++L + D +P++ R R S I N ++ +TG T +G
Sbjct: 112 YTERNAMILFTDDFEAYPIIETSFEGLETR-----RCQSPISARNAENIAITG-YGTFDG 165
Query: 175 QGEPW------------WIKYRK-------------------------KQFNV------- 190
G+ W W K K K FNV
Sbjct: 166 SGDSWRPVKRDKLTVSQWSKLVKSGGVTDAAGKIWYPTAGALKGALACKDFNVPEGINTD 225
Query: 191 ---------TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSP 241
RP L+ ++ S V + +T +SPSW +HP+ ++ I + + P S
Sbjct: 226 EEWDEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINNVKVFNPWYSQ 285
Query: 242 NTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSA 301
N D ++ +SC N I ++ +GDD + +KSG DE G + G P Q+++++ +
Sbjct: 286 NGDALDLESCKNALIINSLFDAGDDAICIKSGKDEDGRRRGEPCQNVLVKNNTVLH-GHG 344
Query: 302 AIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVK 343
+GSEMSGG+K++ D T + T G+R K+ GRG V+
Sbjct: 345 GFVVGSEMSGGVKNIYVTDCTFLGTDVGLRFKSTRGRGGVVE 386
>gi|423216971|ref|ZP_17203467.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
gi|392629501|gb|EIY23508.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
Length = 539
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 154/338 (45%), Gaps = 63/338 (18%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ FG GDG NTKA N AI ++++ GG ++I+P G WLTG L S+ LY +
Sbjct: 62 IEKFGAKGDGLFLNTKAINDAIKDVNQR---GGGKVIIPEGIWLTGPIELLSNVNLYTEQ 118
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+AL+L + D +P++ R R S I N ++ +TG T +G G+
Sbjct: 119 NALVLFTGDFEAYPIIDTSFEGLETR-----RCQSPISARNAENIAITG-YGTFDGNGDC 172
Query: 179 W------------WIKYRK-------------------------KQFNV----------- 190
W W K K FNV
Sbjct: 173 WRPVKKEKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTDEEWA 232
Query: 191 -----TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
RP L+ ++ S V + +T +SPSW +HP+ + + + + P S N D
Sbjct: 233 EIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDA 292
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
I+ +SC N I ++ +GDD + +KSG DE G + G P Q++I++ + +
Sbjct: 293 IDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLH-GHGGFVV 351
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVK 343
GSEMSGG+K++ ED T + T G+R K+ GRG V+
Sbjct: 352 GSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|380693857|ref|ZP_09858716.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 525
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 186/424 (43%), Gaps = 70/424 (16%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG + DG T NT+A N AI +S + GG ++I+P G WLTG L S+ LY K
Sbjct: 61 IRDFGALSDGVTLNTEAINNAIKTVS---SKGGGKVIIPEGLWLTGPVVLLSNVNLYTEK 117
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGN--------- 169
+AL++ S D S L P + + G D R S I N ++ +TG
Sbjct: 118 NALIVFSSDTS---LYPIIEASFEGLDTK--RCQSPISAMNAENIAITGSGVFDGAGDRW 172
Query: 170 --------------------ATINGQGEPWW------------IKYRKKQFNVT------ 191
++ G+ W+ Q +T
Sbjct: 173 RPVKKDKMTERQWKNLVSSGGKVDENGKVWYPDAGALKASVLMTGQNSGQKEITDEEWIY 232
Query: 192 -----RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGI 246
RP ++ ++ S + + +T +SP W +HP+ ++ + + + P S N D +
Sbjct: 233 MKSWLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWYSQNGDAL 292
Query: 247 NPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALG 306
+ +SC N + + + +GDD + +KSG DE G + G P +++II+ + +G
Sbjct: 293 DVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKNNTVLH-GHGGFVIG 351
Query: 307 SEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM-------KTMKYVF 359
SEMSGG+++V + + T G+R K+ GRG V+ I++ + M TM ++
Sbjct: 352 SEMSGGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINMIDIPNDALTMD-LY 410
Query: 360 WMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
+ D P P + + P I +++ ++ +G+ P I I N+T+
Sbjct: 411 YAVNDSPETPIPDVNEET-PVFRNIYISNVLCRGAGRAVYFNGLPEMPLKNILIKNMTVT 469
Query: 420 LTEK 423
+K
Sbjct: 470 NAKK 473
>gi|294807547|ref|ZP_06766344.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345512393|ref|ZP_08791923.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
gi|294445248|gb|EFG13918.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345453872|gb|EEO50012.2| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
Length = 529
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 153/338 (45%), Gaps = 63/338 (18%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ FG GDG NTKA N AI +++ GG ++I+P G WLTG L S+ LY +
Sbjct: 52 IEKFGAKGDGLFLNTKAINDAIKEVNQR---GGGKVIIPEGIWLTGPIELLSNVNLYTEQ 108
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+AL+L + D +P++ R R S I N ++ +TG T +G G+
Sbjct: 109 NALVLFTGDFEAYPIIATSFEGLETR-----RCQSPISARNAENIAITG-YGTFDGNGDC 162
Query: 179 W------------WIKYRK-------------------------KQFNV----------- 190
W W K K FNV
Sbjct: 163 WRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTDEEWA 222
Query: 191 -----TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
RP L+ ++ S V + +T +SPSW +HP+ + + + + P S N D
Sbjct: 223 EIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDA 282
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
I+ +SC N I ++ +GDD + +KSG DE G + G P Q++I++ + +
Sbjct: 283 IDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLH-GHGGFVV 341
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVK 343
GSEMSGG+K++ ED T + T G+R K+ GRG V+
Sbjct: 342 GSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 379
>gi|262408522|ref|ZP_06085068.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646518|ref|ZP_06724155.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|262353387|gb|EEZ02481.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638137|gb|EFF56518.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
Length = 539
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 153/338 (45%), Gaps = 63/338 (18%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ FG GDG NTKA N AI +++ GG ++I+P G WLTG L S+ LY +
Sbjct: 62 IEKFGAKGDGLFLNTKAINDAIKEVNQR---GGGKVIIPEGIWLTGPIELLSNVNLYTEQ 118
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+AL+L + D +P++ R R S I N ++ +TG T +G G+
Sbjct: 119 NALVLFTGDFEAYPIIATSFEGLETR-----RCQSPISARNAENIAITG-YGTFDGNGDC 172
Query: 179 W------------WIKYRK-------------------------KQFNV----------- 190
W W K K FNV
Sbjct: 173 WRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTDEEWA 232
Query: 191 -----TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
RP L+ ++ S V + +T +SPSW +HP+ + + + + P S N D
Sbjct: 233 EIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDA 292
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
I+ +SC N I ++ +GDD + +KSG DE G + G P Q++I++ + +
Sbjct: 293 IDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLH-GHGGFVV 351
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVK 343
GSEMSGG+K++ ED T + T G+R K+ GRG V+
Sbjct: 352 GSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|376338082|gb|AFB33586.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/137 (46%), Positives = 93/137 (67%)
Query: 272 SGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVR 331
SGWDEYGI G P+ ++IIRR+I + S+ +ALGSEMSGGI+ V A+D+ N++ G+R
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 332 IKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVA 391
IKTA GRG YV+++Y+ +TMK + TG YG HPD +DP AL + I ++D++
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALXDIQRITFKDIIG 120
Query: 392 DNVTQSAKLDGIRNDPF 408
D + + + GI+N PF
Sbjct: 121 DEIKTAGSVXGIQNAPF 137
>gi|383114440|ref|ZP_09935204.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
gi|382948584|gb|EIC71811.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
Length = 529
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 155/338 (45%), Gaps = 63/338 (18%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ FG GDG NTKA N AI ++++ GG ++I+P G WLTG L S+ LY +
Sbjct: 52 IEKFGAKGDGLFLNTKAINDAIKDVNQR---GGGKVIIPEGVWLTGPIELLSNVNLYTEQ 108
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+AL+L + + +P++ R R S I N ++ +TG + T +G G+
Sbjct: 109 NALVLFTGNFEAYPIIATSFEGLETR-----RCQSPISARNAENIAITG-HGTFDGNGDC 162
Query: 179 W------------WIKYRK-------------------------KQFNV----------- 190
W W K K FNV
Sbjct: 163 WRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTDEEWA 222
Query: 191 -----TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
RP L+ ++ S V + +T +SPSW +HP+ + + + + P S N D
Sbjct: 223 EIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDA 282
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
I+ +SC N I ++ +GDD + +KSG DE G + G P Q++I++ + +
Sbjct: 283 IDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLH-GHGGFVV 341
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVK 343
GSEMSGG+K++ ED T + T G+R K+ GRG V+
Sbjct: 342 GSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 379
>gi|182416077|ref|YP_001821143.1| glycosyl hydrolase [Opitutus terrae PB90-1]
gi|177843291|gb|ACB77543.1| glycosyl hydrolase family 88 [Opitutus terrae PB90-1]
Length = 865
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 185/396 (46%), Gaps = 60/396 (15%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+TDFG D T A AI + GG +++VP G+WLTG+ +L S+ L++ K
Sbjct: 450 ITDFGAKPDADC--TDAIRAAIDACHQA---GGGRVVVPAGEWLTGAIHLRSNVNLHVAK 504
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE- 177
A L D +++P++ + R FS I+ ++ +T G T++G +
Sbjct: 505 GATLRWVFDLAKYPIV-----FTRWEGVECMNFSPFIYAWEQENIAIT-GEGTLDGGSDW 558
Query: 178 -PWW---------------IKYRKKQFNVT---------------RPYLIEVMFSDNVQI 206
WW + R Q T RP ++ N+ I
Sbjct: 559 STWWGWNDKRDGTAPKQRAARNRLIQMGETNVPVAERVFGANDFLRPNFVQPYRCKNILI 618
Query: 207 SNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDD 266
+++I SP W +HPV S N+ ++ + I + PN DG +P+SC + +ED +GDD
Sbjct: 619 EGVSIIRSPMWELHPVLSQNITVRNVKITS--HGPNNDGFDPESCRDILVEDTLFDTGDD 676
Query: 267 CVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRAED--ITA 323
C+A+KSG + G +V +PT++++IRR C+ D + LGSE +GGI+++ ED + +
Sbjct: 677 CIAIKSGRNGDGRRVNVPTENMVIRR--CVMKDGHGGVVLGSECTGGIRNIFVEDCEMDS 734
Query: 324 INTQSGVRIKTAVGRGAYVKEIYVRRMTM-KTMKYVFWMTGDYGSHPDPGFDPKALPTVT 382
+ G+R K RG ++ +++R + + + + V + Y F P
Sbjct: 735 PDLDRGLRFKNNAVRGGVLENVFMRNVKIGRVGEAVLTIDLLYEEGAKGAFKPIV----- 789
Query: 383 GINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
R++ +N+T SA + F G I ++ I
Sbjct: 790 ----RNVQMENITSSASPRVMYIRGFPGAVIEDIRI 821
>gi|427386399|ref|ZP_18882596.1| hypothetical protein HMPREF9447_03629 [Bacteroides oleiciplenus YIT
12058]
gi|425726439|gb|EKU89304.1| hypothetical protein HMPREF9447_03629 [Bacteroides oleiciplenus YIT
12058]
Length = 467
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 195/396 (49%), Gaps = 58/396 (14%)
Query: 54 KHSAVLTDFGGVGDGKTSNT-KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
K + ++TDFG D + +A N AI +GG +IVP G + TG L S+
Sbjct: 45 KQTYLITDFGAKPDTPDAPCHEAINQAIVTC---CLNGGGTVIVPKGTFYTGPITLKSNV 101
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
++ + A+L S D+S + P + + G D R LI+ T++ +TG TI
Sbjct: 102 NFHVEEGAILKFSTDQSLY--FPGVITRWEGLDCYNAR--PLIYAYGETNIAITG-KGTI 156
Query: 173 NGQG--EPWWI-----KYRKKQFNVT------------------------------RPYL 195
+GQG + WW +Y K+ V RP L
Sbjct: 157 DGQGSNDTWWPMCGAPRYGWKEGMVAQRNGGRERLLMYGETSTPVYKRVMTPEDGLRPQL 216
Query: 196 IEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTR 255
I + + V I ++TL++SP W +HP++ +++++G+ + PN DG +P+SC N
Sbjct: 217 INLYSCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVYVYN--RGPNGDGCDPESCKNVL 274
Query: 256 IEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKD 315
IE+ +GDDC+A+KSG ++ G K G+P++++I+R + + +GSE+SGG ++
Sbjct: 275 IENCTFDTGDDCIAIKSGRNQDGRKWGIPSENIIVRGCY-MKKGHGGVVIGSEISGGYRN 333
Query: 316 VRAED--ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM-KTMKYVFWMTGDYGSHP--D 370
+ E+ + + + +RIKT+ RG ++ ++VR +T+ + + V + Y + +
Sbjct: 334 LYVENCKMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAVLRINLQYENRENCN 393
Query: 371 PGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRND 406
GF PTV ++ +++ + + G+ ND
Sbjct: 394 RGF----TPTVRNVHLKNVTCEKSKLGVLIIGLDND 425
>gi|167763470|ref|ZP_02435597.1| hypothetical protein BACSTE_01844 [Bacteroides stercoris ATCC
43183]
gi|167698764|gb|EDS15343.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 467
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 189/380 (49%), Gaps = 54/380 (14%)
Query: 16 VIKILSTLLTLGLLSPQVAEC-RPTKNSYTIEFQALNCR--KHSAVLTDFGGVGDGKTSN 72
VI I+S LL++ L + + + K S IE Q K + ++TDFG D
Sbjct: 4 VIGIISLLLSVTLATANPIDFDKAFKESAKIEKQIKRTSFPKRTYLITDFGAQPDTPDEP 63
Query: 73 T-KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEW 131
+A N AI S +GG ++VP G + TG L S+ ++ + A+L S D+S +
Sbjct: 64 CHEAINRAILTCS---LNGGGTVVVPKGTFHTGPITLKSNVNFHVEEGAVLKFSTDQSLY 120
Query: 132 PLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG--EPWW-----IKYR 184
P + + G D R LI+ T++ +TG TI+GQG E WW +Y
Sbjct: 121 --FPAVITRWEGLDCYNAR--PLIYAYGETNIAITG-KGTIDGQGSNETWWPMCGASRYG 175
Query: 185 KKQFNVT------------------------------RPYLIEVMFSDNVQISNLTLIDS 214
K+ V RP LI + + V I ++TL++S
Sbjct: 176 WKEGMVAQRNGGRERLLMYGETSTPVYKRIMKPEDGMRPQLINLYSCNTVLIEDVTLLNS 235
Query: 215 PSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGW 274
P W +HP++ +++++G+ + PN DG +P+SC N IE+ +GDDC+A+KSG
Sbjct: 236 PFWVIHPLFCESLIVRGVHVFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGR 293
Query: 275 DEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAED--ITAINTQSGVRI 332
++ G K +P++++I+R + + +GSE+SGG +++ E+ + + + +RI
Sbjct: 294 NQDGRKWNIPSENIIVRGCF-MKNGHGGVVIGSEISGGYRNLFVENCRMDSPDLDRVIRI 352
Query: 333 KTAVGRGAYVKEIYVRRMTM 352
KT+ RG ++ ++VR +T+
Sbjct: 353 KTSTCRGGLIENVFVRNVTV 372
>gi|423212244|ref|ZP_17198773.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
gi|392695132|gb|EIY88357.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
Length = 539
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 153/338 (45%), Gaps = 63/338 (18%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ FG GDG NTKA N AI +++ GG ++I+P G WLTG L S+ LY +
Sbjct: 62 IEKFGAKGDGLFLNTKAINDAIKEVNQR---GGGKVIIPEGIWLTGPIELLSNVNLYTEQ 118
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+AL+L + D +P++ R R S I N ++ +TG T +G G+
Sbjct: 119 NALVLFTGDFEAYPIIATSFEGLETR-----RCQSPISARNAENIAITG-YGTFDGNGDC 172
Query: 179 W------------WIKYRK-------------------------KQFNV----------- 190
W W K K FNV
Sbjct: 173 WRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINTDEEWA 232
Query: 191 -----TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
RP L+ ++ S V + +T +SPSW +HP+ + + + + P S N D
Sbjct: 233 EIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNVMVINPWYSQNGDA 292
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
I+ +SC N I ++ +GDD + +KSG DE G + G P Q++I++ + +
Sbjct: 293 IDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLH-GHGGFVV 351
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVK 343
GSEMSGG+K++ ED T + T G+R K+ GRG V+
Sbjct: 352 GSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|330836022|ref|YP_004410663.1| Polygalacturonase [Sphaerochaeta coccoides DSM 17374]
gi|329747925|gb|AEC01281.1| Polygalacturonase [Sphaerochaeta coccoides DSM 17374]
Length = 459
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 162/368 (44%), Gaps = 52/368 (14%)
Query: 91 GAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGR 150
G ++++P G W TG L S T + + + L+ DE + +P Y R
Sbjct: 34 GGEVLIPSGTWHTGPVTLASGITFRLAEGSRLVFIPDEDLY-----VPVYSRWEGVSCWC 88
Query: 151 FSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKK------------------------ 186
+F + DV VTG I+G G+ WW R+K
Sbjct: 89 MHPCLFISESHDVTVTG-TGVIDGSGKSWWESARRKRALHMKPETPMEKKLAALNPGYAD 147
Query: 187 --------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
Q RP L++++ S V + +TL SP W +HPV+SS + + + I P
Sbjct: 148 QPGGGGGRQCQFLRPPLLQILDSTRVTVEGVTLTGSPFWTLHPVFSSGLTFRDVKIINPA 207
Query: 239 DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISP 298
D+PNTDGI+ DSC + + + GDD +A+KSG GI G PT+++ + S
Sbjct: 208 DAPNTDGIDIDSCQDVMVTGCLVDVGDDGIALKSGSGPDGIAAGRPTRNVRVSGCTVRSA 267
Query: 299 DSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMK----- 353
I +GSE + GI + AED T G+RIKT GRG + ++ R+TM+
Sbjct: 268 -HGGIVIGSETAAGISGLVAEDCLFDGTDRGIRIKTRRGRGGAISDLRFERLTMRNNLCP 326
Query: 354 ---TMKYVFWMTGD--YGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAK-LDGIRNDP 407
M Y T + P+P D P++ I RD VA SA + G+ P
Sbjct: 327 LAINMYYRCGTTEGSLFSLSPEPIDD--TTPSIGNILVRDCVATGSQASAGFIVGLPERP 384
Query: 408 FTGICISN 415
T + + +
Sbjct: 385 ITELVVED 392
>gi|347537471|ref|YP_004844896.1| glycoside hydrolase family protein [Flavobacterium branchiophilum
FL-15]
gi|345530629|emb|CCB70659.1| Glycoside hydrolase precursor, family 28 [Flavobacterium
branchiophilum FL-15]
Length = 475
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 204/438 (46%), Gaps = 64/438 (14%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ D+G + DG NT FN I S+ GG +++P G + TG +L ++ L++ +
Sbjct: 59 VMDYGAISDGVFDNTVVFNKTIKTCSE---KGGGMVLIPKGTYFTGPIHLDNNVNLHLSE 115
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG-- 176
A ++ S + ++PL+ + +S LI+ N T+V +TG +NG+
Sbjct: 116 GAEIVFSTNPKDYPLV-----HTSFEGTELMNYSPLIYAYNKTNVAITG-KGILNGKASN 169
Query: 177 EPWW-----------------------------IKYRKKQF---NVTRPYLIEVMFSDNV 204
+ WW + + + F N RP IE NV
Sbjct: 170 DNWWPWCGKSVYGWKKGDPIQNVKQLMESAEKGMAVKDRVFGDGNYLRPNFIEFFECKNV 229
Query: 205 QISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSG 264
+ + ++++P W +HP+ S++V++ G+ I + PN DG +P+ N I + +G
Sbjct: 230 HLKDFKIVNAPFWIIHPIKSNHVIVDGIHIES--HGPNNDGCDPEYSKNVIIRNCTFDTG 287
Query: 265 DDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRAED--I 321
DDC+A+K+G D G +V + +++++I+ C D + +GSE+S G+ +V E+ +
Sbjct: 288 DDCIAIKAGRDSDGRRVAIKSENILIQN--CKMFDGHGGVTIGSEISAGVSNVFVENCIM 345
Query: 322 TAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDPGFDPKALPT 380
+ +RIK+ RG ++ IYVR +T+ +K V + YG H + +P
Sbjct: 346 DSPELDRAIRIKSNTRRGGIIENIYVRNITVGEVKESVLGIDLHYGVHGNQ--TGTFMPI 403
Query: 381 VTGINYRDMVADNVTQSAKLDGIRNDPFTGICISN-----VTIKLTEKPKELQWNCTNIQ 435
V I + ++ ++ L GI G ISN VTI+ E ++ N N++
Sbjct: 404 VRNI----FIENSTIKNGGLYGILAKGHPGFPISNIRFKEVTIEKVETDYAIE-NVENLK 458
Query: 436 GITSRVTPQACELLPKKE 453
I + + E PKK+
Sbjct: 459 FINTYINGSLIE-SPKKQ 475
>gi|224540752|ref|ZP_03681291.1| hypothetical protein BACCELL_05666 [Bacteroides cellulosilyticus
DSM 14838]
gi|423224671|ref|ZP_17211139.1| hypothetical protein HMPREF1062_03325 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224517619|gb|EEF86724.1| hypothetical protein BACCELL_05666 [Bacteroides cellulosilyticus
DSM 14838]
gi|392635111|gb|EIY29017.1| hypothetical protein HMPREF1062_03325 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 467
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 188/380 (49%), Gaps = 54/380 (14%)
Query: 16 VIKILSTLLTLGLLSPQVAEC-RPTKNSYTIEFQALNCR--KHSAVLTDFGGVGDGKTSN 72
V+ I+S LL+ L + + + K S IE Q K + ++TDFG D +
Sbjct: 4 VLGIISLLLSATLATANSIDFDKAFKESTKIEKQIKKTSFPKQTYLITDFGAKPDTPDAP 63
Query: 73 T-KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEW 131
+A N AI +GG ++VP G + TG L S+ ++ + A+L S D+S +
Sbjct: 64 CHEAINQAIVTC---CLNGGGTVVVPKGTFYTGPITLKSNVNFHVEEGAVLKFSTDQSLY 120
Query: 132 PLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG--EPWWI-----KYR 184
P + + G D R LI+ T++ +TG TI+GQG E WW +Y
Sbjct: 121 --FPGVITRWEGIDCYNAR--PLIYAYGETNIAITG-KGTIDGQGSNETWWPMCGAPRYG 175
Query: 185 KKQFNVT------------------------------RPYLIEVMFSDNVQISNLTLIDS 214
K+ V RP LI + + V I ++TL++S
Sbjct: 176 WKEGMVAQRNGGRERLLMYGETSTPIYKRVMTPEDGLRPQLINLYSCNTVLIEDVTLLNS 235
Query: 215 PSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGW 274
P W +HP++ ++ ++G+ + PN DG +P+SC N IE+ +GDDC+A+KSG
Sbjct: 236 PFWVIHPLFCESLTVRGVYVYN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGR 293
Query: 275 DEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAED--ITAINTQSGVRI 332
++ G K G+P++++I+R + + +GSE+SGG +++ E+ + + + +RI
Sbjct: 294 NQDGRKWGVPSENIIVRGCY-MKKGHGGVVIGSEISGGYRNLYVENCKMDSPDLDRVIRI 352
Query: 333 KTAVGRGAYVKEIYVRRMTM 352
KT+ RG ++ ++VR +T+
Sbjct: 353 KTSTCRGGLIENVFVRNVTV 372
>gi|325106411|ref|YP_004276065.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975259|gb|ADY54243.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 476
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 174/342 (50%), Gaps = 32/342 (9%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ +G GDGKT NT AI + +K GG ++ PG++LTGS + L I K
Sbjct: 49 VAKYGAKGDGKTLNTNTIQKAIDDCAK---KGGGIVVFNPGEYLTGSVFVKKGVNLRIDK 105
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+L SQD ++ ++ + G + P ++LI + D +++G IN QG+
Sbjct: 106 GVTILGSQDIKDYKVIDTRVA-GIEMEWP----AALINVLDQEDAMISG-KGLINAQGKV 159
Query: 179 WWIKY---RKK----------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSS 225
+W Y RK+ ++ RP I V S NV I +L + + W V VYSS
Sbjct: 160 FWDYYWNLRKEYEPKGLRWIIDYDARRPRTILVSNSKNVTIKDLNIQQAGFWTVQVVYSS 219
Query: 226 NVLIQGLTIRAPI--DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGM 283
V + GLTI + P+TDG++ DS + +++ I DD +K+G D G++V
Sbjct: 220 YVTVDGLTINNNVGGHGPSTDGVDIDSSSWILVQNTDIDCNDDNFCIKAGRDADGLRVNR 279
Query: 284 PTQHLIIRRLICISPDSAAI-ALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYV 342
P ++++IR C++ + LGSE SGGI+++ A +I + T + + IK+AV RG +V
Sbjct: 280 PCEYVVIRD--CVARKGGGLLTLGSETSGGIRNIYASNIKGMATSNCLNIKSAVTRGGFV 337
Query: 343 KEIYVRRMTMKTMKYVFWMTGDYG-----SHPDPGFDPKALP 379
+ + + +TM ++ V + ++ S G+D ++P
Sbjct: 338 ENVLLENVTMDSVGTVLQVNMNWNPAYSYSELPKGYDYNSIP 379
>gi|260642009|ref|ZP_05414289.2| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623835|gb|EEX46706.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 546
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 154/338 (45%), Gaps = 63/338 (18%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ FG GDG NTKA N AI +++++ GG ++I+P G WLTG L S+ LY +
Sbjct: 61 IEKFGAKGDGLFLNTKAINDAIKDVNQH---GGGKVIIPEGIWLTGPIELLSNVNLYTER 117
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+AL+L + D +P++ R R S I N ++ +TG T +G G+
Sbjct: 118 NALVLFTGDFEAYPIIATSFEGLETR-----RCQSPISARNAENIAITG-YGTFDGNGDC 171
Query: 179 W------------WIKYRK-------------------------KQFNV----------- 190
W W K K FNV
Sbjct: 172 WRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTPGSLKGAMACKDFNVPEGINTDEEWN 231
Query: 191 -----TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
RP L+ ++ S + + +T +SPSW +HP+ + + + + P S N D
Sbjct: 232 EIRPWLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDA 291
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
I+ +SC N I ++ +GDD + +KS DE G + G P Q++I++ + +
Sbjct: 292 IDLESCKNALIINSVFDAGDDAICIKSDKDEDGRRRGEPCQNVIVKNNTVLH-GHGGFVV 350
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVK 343
GSEMSGG+K++ ED T + T G+R K+ GRG V+
Sbjct: 351 GSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 388
>gi|371776320|ref|ZP_09482642.1| glycoside hydrolase family protein [Anaerophaga sp. HS1]
Length = 463
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 195/415 (46%), Gaps = 54/415 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+TDFG V K S TKA + AI+ S GG ++I+P G+W +G +L S+ L++ +
Sbjct: 62 ITDFGAVEKEKISTTKAISQAIAAASD---AGGGRVIIPAGEWFSGKIHLKSNVNLHLSE 118
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG-- 176
A+L S D ++ LP + + G + +S LI+ +V +TG G
Sbjct: 119 GAILTFSGDPQDY--LPAVHTTWEGIE--CYNYSPLIYAYKCENVAITGAGQLKAEMGVW 174
Query: 177 EPWWIK------YRKKQFNVT------------------RPYLIEVMFSDNVQISNLTLI 212
+ W+ + KK +++ RP I+ NV++ +T+I
Sbjct: 175 KRWFARPPAHMNSLKKLYHMAAKGVAVQERVMVNDTSHLRPQFIQFNRCKNVRMEGVTII 234
Query: 213 DSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKS 272
+SP W +HP NV+I+ + + A N DG++P+ C N IED GDD +A+KS
Sbjct: 235 NSPFWVIHPYMCHNVVIRNVKVYA--HGHNNDGVDPEMCENVLIEDCVFDQGDDAIAIKS 292
Query: 273 GWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSG--- 329
G ++ ++ P++++++R + + +A+GSE+SGG+++V E+ T
Sbjct: 293 GRNQDAWRLNTPSRNIVVRNCL-VKNGHQLLAIGSELSGGVENVFLENCTVEENARMFHL 351
Query: 330 VRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPD---------PGFDPKALPT 380
V IKT RG YVK +YVR +T M G G D P ++ + P
Sbjct: 352 VFIKTNERRGGYVKNVYVRNVTADKMS-----QGILGIDTDVLYQWRDLVPTYEKRLTP- 405
Query: 381 VTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQ 435
++ + D+ A+ V +++ P I + N+ ++ K + N N Q
Sbjct: 406 ISDVYLTDIKANKVNFLSRILAQDALPVKNIRLKNIRVEQITGEKLIHNNVVNFQ 460
>gi|298480639|ref|ZP_06998835.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298273073|gb|EFI14638.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 469
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 196/409 (47%), Gaps = 62/409 (15%)
Query: 54 KHSAVLTDFGG-VGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
K + +TDFG V D +A N AI S GG ++VP G + TG L S
Sbjct: 47 KRTYRITDFGAKVDDESNLCHEAINQAILQCS---LAGGGTVLVPKGTFYTGPITLKSDV 103
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
++ + A+L S D+S + P + + G D R LI+ +++ +TG I
Sbjct: 104 NFHLEEGAVLKFSTDQSLY--FPAVLTRWEGIDCYNAR--PLIYAYGESNIAITG-KGII 158
Query: 173 NGQG--EPWW-----IKYRKKQFNVT------------------------------RPYL 195
+GQG + WW KY K+ V RP L
Sbjct: 159 DGQGSIDAWWPMCGSAKYGWKEGMVAQRNGGRERLQMYGETSTPVYKRLMKPEDGMRPQL 218
Query: 196 IEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTR 255
+ + + I +TL++SP W +HP++ ++++ G+T+ PN DG +P+SC N
Sbjct: 219 LNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNR--GPNGDGCDPESCKNVL 276
Query: 256 IEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKD 315
IE+ +GDDC+A+KSG +E G K +P++++I+R + + + +GSE+SGG ++
Sbjct: 277 IENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCM-MKNGHGGVVIGSEISGGYRN 335
Query: 316 VRAED--ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM-KTMKYVFWMTGDYGSHP--D 370
+ ED + + N +RIKT+ RG ++ I+VR +T+ + + V + Y +
Sbjct: 336 LFVEDCQMDSPNLDRVIRIKTSTCRGGLIENIFVRNVTVGQCREAVLRINLQYENREKCK 395
Query: 371 PGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
GF+ P V ++ +++ + + G+ +D +SN++I+
Sbjct: 396 RGFE----PIVRNVHLKNVTCEKSELGVLIIGLEDDKH----VSNISIE 436
>gi|354723575|ref|ZP_09037790.1| glycoside hydrolase family protein [Enterobacter mori LMG 25706]
Length = 430
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 194/414 (46%), Gaps = 62/414 (14%)
Query: 57 AVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYI 116
++LT FG + +T A AI+ A G +++P G++LTG+ L S TL++
Sbjct: 5 SILT-FGADPSAERISTTAIQQAIAK-----AKPGDSVVIPAGRYLTGAIFLKSDITLHL 58
Query: 117 HKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG 176
+ ++LL SQ ++PL+ + G P G +I N +V +TG T++GQG
Sbjct: 59 VQGSVLLGSQHLEDYPLIDTRVA-GIDMRWPAG----IINVINAQNVSLTG-TGTLDGQG 112
Query: 177 EPWWIKYRKKQ-------------------FNVTRPYLIEVMFSDNVQISNLTLIDSPSW 217
WW ++ ++ RP + V S N+ + + T +S W
Sbjct: 113 RIWWQRFWGDDEHGGMVGDYSANGLRWVVDYDCQRPRNVLVYESKNILLKDFTSCESGFW 172
Query: 218 NVHPVYSSNVLIQGLTIRAPIDS--PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWD 275
NVH YS +V ++ L+I I+S P+TDGI+ DSC RIE + DD + +K+G
Sbjct: 173 NVHLCYSRDVAVENLSI---INSAGPSTDGIDIDSCEQVRIERCTVSCNDDNICIKAGRG 229
Query: 276 EYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTA 335
+ ++IR C+ + I LGSE SGGI+ V E+ T G RIK+A
Sbjct: 230 REAAPKARTARAIVIRE--CVLNKGSGITLGSETSGGIEHVLIENNRFNGTGVGFRIKSA 287
Query: 336 VGRGAYVKEIYVRRMTMKTMKY-----VFWM----TGDYGSHPD---------------P 371
RG +++ I VR + ++ +++ + W GD G+ D
Sbjct: 288 RNRGGFIRHITVRNLLLQNVRFPVLIQLNWFPQYSYGDSGNLQDKPEHWRKLADGVEGEA 347
Query: 372 GFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPK 425
G + PT++ I R ++ +++ ++G + P G+ + N+++ TE K
Sbjct: 348 GLTEVSHPTLSNITARRSDSNLFSRAFFIEGYPDRPVCGLTLDNISVDATEFGK 401
>gi|329954471|ref|ZP_08295562.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328527439|gb|EGF54436.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 467
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 188/380 (49%), Gaps = 54/380 (14%)
Query: 16 VIKILSTLLTLGLLSPQVAEC-RPTKNSYTIEFQALNCR--KHSAVLTDFGGVGDGKTSN 72
VI I+S LL++ L + + + K S IE Q + ++TDFG D
Sbjct: 4 VIGIISLLLSVTLATANPIDFDKAFKESANIEKQIKRTSFPDRTYLITDFGAKPDTPDEP 63
Query: 73 T-KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEW 131
+A N AI S +GG ++VP G + TG L S+ ++ + A+L S D+S +
Sbjct: 64 CHEAINQAIVTCS---LNGGGTVVVPKGTFHTGPVTLKSNVNFHVEEGAVLKFSTDQSLY 120
Query: 132 PLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG--EPWWI-----KYR 184
P + + G D R LI+ T++ +TG TI+GQG E WW +Y
Sbjct: 121 --FPAVITRWEGLDCYNAR--PLIYAYGETNIAITG-KGTIDGQGSNETWWSMCGAPRYG 175
Query: 185 KKQFNVT------------------------------RPYLIEVMFSDNVQISNLTLIDS 214
K+ V RP LI + + V I ++TL++S
Sbjct: 176 WKEGMVAQRNGGRERLLMYGETSTPIYKRIMKPEDGMRPQLINLYSCNTVLIEDVTLLNS 235
Query: 215 PSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGW 274
P W +HP++ +++++G+ + PN DG +P+SC N IE+ +GDDC+A+KSG
Sbjct: 236 PFWVIHPLFCESLIVRGVHVFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGR 293
Query: 275 DEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAED--ITAINTQSGVRI 332
++ G K +P++++I+R + + +GSE+SGG +++ E+ + + + +RI
Sbjct: 294 NQDGRKWNIPSENIIVRSCF-MKNGHGGVVIGSEISGGYRNLFVENCRMDSPDLDRVIRI 352
Query: 333 KTAVGRGAYVKEIYVRRMTM 352
KT+ RG ++ ++VR +T+
Sbjct: 353 KTSTCRGGLIENVFVRNVTV 372
>gi|374309036|ref|YP_005055466.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358751046|gb|AEU34436.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 471
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 177/371 (47%), Gaps = 35/371 (9%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG VGDGKT +T A + S GG ++ VP G++LTG+ L S+ L +
Sbjct: 59 VRDFGAVGDGKTKDTLALQQTLDRCSLL---GGGEVFVPAGEYLTGALVLRSNTLLRLDG 115
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG-----GNATIN 173
DA LL S D +++PL GR G + I + ++ + G GN I
Sbjct: 116 DASLLGSPDVADYPLTQ---VRWEGRWIKG--YIGFISAMDAENIGIVGKGKIVGNTAIK 170
Query: 174 GQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLT 233
G+ E R QF P L+E + NV++ + + W++HP Y N+ + +T
Sbjct: 171 GRVE------RATQFR--NPALLEFVSCRNVRVEDCFTSQNDMWSIHPTYCENITFKNVT 222
Query: 234 IRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRL 293
+ + DGI+ DSC + I+ + DDC+++KSG E G + PT+ + I
Sbjct: 223 VHS-----GADGIDVDSCKHVVIDGCDFDTHDDCISLKSGRGEEGYTILRPTEDVQISNC 277
Query: 294 ICISPDSAAIALGSEMSGGIKDVRAEDITAINTQS-GVRIKTAVGRGAYVKEIYVRRMTM 352
+ A I +GSE SGGI++VR + ++ + IK+ GRGA++++I + + +
Sbjct: 278 TFMDHFWACIGIGSETSGGIRNVRVNHCKCLGARTFAIYIKSRPGRGAFIEDISMNDLEV 337
Query: 353 KTMKYVFWM-----TGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIR-ND 406
K F +G P PG + +PT+ ++ ++ ++ GI +
Sbjct: 338 SGAKQGFLRFNILDSGKQDEFPVPG--EEGIPTIRNFHFSNIRVTDMPVLVDGVGIHPSK 395
Query: 407 PFTGICISNVT 417
P G ++NVT
Sbjct: 396 PLEGFSLTNVT 406
>gi|197105922|ref|YP_002131299.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
gi|196479342|gb|ACG78870.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
Length = 470
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 189/409 (46%), Gaps = 59/409 (14%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+TDFG G+ +++AF A ++ A GG +++VPPG WLTG +L S+ L++ K
Sbjct: 50 ITDFGADGEAVADSSEAFARA---IAACHAAGGGRVVVPPGWWLTGPIHLKSNVNLHVQK 106
Query: 119 DALLLASQDESEW-PLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQ-- 175
A +L D + PL+ + R +S ++ ++ VTG ++GQ
Sbjct: 107 GATILFKTDPKAYLPLV-----FTRWEGVELMNYSPFVYAFEQENIAVTG-EGVLDGQCS 160
Query: 176 GEPWWI--------------------KYRKKQFNVT-----------------RPYLIEV 198
E WW R + F + RP I+
Sbjct: 161 REHWWTWKGPWKQNQHGWAEGMPNQRPARARLFQMAEDRTPVEQRVFGEGSYLRPPFIQP 220
Query: 199 MFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIED 258
NV I ++L SP W VHPV NV I+ L I + PN DGI+P+SC + IED
Sbjct: 221 YRCTNVLIEGVSLRRSPFWQVHPVLCRNVTIRRLDINS--HGPNNDGIDPESCDHVLIED 278
Query: 259 NYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVR 317
+ +GDDC+A+ SG +E G +VG+P Q+++IR C D + +GS++SG +++V
Sbjct: 279 CFFSTGDDCIALNSGRNEDGRRVGVPCQNVVIRG--CRMADGHGGLTIGSQISGHVRNVF 336
Query: 318 AED--ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDP 375
AE+ + + + +R K RG V+ + R + + ++ +T D+ + G +
Sbjct: 337 AENCRLDSPDLDHAIRFKNNALRGGIVERVRYRNLEVGQVRRAV-VTVDFNY--EEGANG 393
Query: 376 KALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKP 424
+ P + + ++ + ++ L G+ P I I + + +P
Sbjct: 394 RFKPVLRDVLIENVRSGRSRRAVDLQGLPGAPARDIRIVDCDFRGVAEP 442
>gi|329960859|ref|ZP_08299138.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328532145|gb|EGF58949.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 488
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 212/449 (47%), Gaps = 61/449 (13%)
Query: 15 HVIKILSTLLTLGLLSPQVAEC-RPTKNSYTIEFQALNCR--KHSAVLTDFGGVGDGKTS 71
V+ LS LL++ + + + + K S IE Q K + ++TDFG D S
Sbjct: 24 RVLGFLSLLLSVAMATANPIDFDKAFKESARIEKQIKKTSFPKRTYLITDFGAKPDTPDS 83
Query: 72 NT-KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESE 130
+ N AI S +GG +IVP G + TG L S+ ++ + A L S D+S
Sbjct: 84 PCHEEINRAIVTCS---LNGGGTVIVPKGTFYTGPITLKSNVNFHVEEGATLKFSTDQSL 140
Query: 131 WPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG--EPWWI-----KY 183
+ P + + G D R LI+ T++ +TG TI+GQG E WW +Y
Sbjct: 141 Y--FPGVITRWEGLDCYNAR--PLIYAYGETNIAITG-KGTIDGQGSKETWWPMCGAPRY 195
Query: 184 RKKQFNVT------------------------------RPYLIEVMFSDNVQISNLTLID 213
K+ V RP L+ + + V I ++TL++
Sbjct: 196 GWKEGMVAQRNGGRERLLMYGETSTPIYKRVMKPEDGLRPQLVNLYSCNTVLIEDITLLN 255
Query: 214 SPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSG 273
SP W +HP++ ++ ++G+ + PN DG +P+SC N IE+ +GDDC+A+KSG
Sbjct: 256 SPFWVIHPLFCESLTVRGVKVFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSG 313
Query: 274 WDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAED--ITAINTQSGVR 331
+ G K +P++++I+R + + +GSE+SGG +++ E+ + + N +R
Sbjct: 314 RNADGRKWNIPSENIIVRNCF-MKNGHGGVVIGSEISGGYRNLYVENCQMDSPNLDRVIR 372
Query: 332 IKTAVGRGAYVKEIYVRRMTM-KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMV 390
IKT+ RG ++ ++VR +T+ + + V + Y + D P V ++ +++
Sbjct: 373 IKTSTCRGGIIENVFVRNVTVGQCREAVLRINLQYENREK--CDRSFPPVVRNVHLKNVT 430
Query: 391 ADNVTQSAKLDGIRNDPFTGICISNVTIK 419
+ + G+ +D +SNV+++
Sbjct: 431 CEKSKLGILIIGLDDDKH----VSNVSVE 455
>gi|332533447|ref|ZP_08409312.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332037156|gb|EGI73613.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 474
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 187/407 (45%), Gaps = 69/407 (16%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG +G+ T+A N+AI A GG Q+ +P G + TG+ +L S+ L++
Sbjct: 49 IKDFGAKENGQYDCTQAINSAIEACH---AQGGGQVYIPDGTYFTGAIHLLSNVNLHLSD 105
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG-GNATINGQGE 177
+A++ S D + + LP + + G + G +S LI+ ++ +TG G NG +
Sbjct: 106 NAIVSFSTDPTHY--LPEVFTRWEGLEMMG--YSPLIYAFEQENIAITGKGTLQGNGDNQ 161
Query: 178 PWW-----------------------IKYRKKQFNV------------------TRPYLI 196
WW + + Q V RP I
Sbjct: 162 TWWPWKGPHKEGHWDLIKDSQGKVLHQREARDQLMVDAEAGVPVSERIYSTGAYLRPPFI 221
Query: 197 EVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRI 256
+ N+ I +T+ +SP W ++PV +V + + + PN+DG +P+SC + I
Sbjct: 222 QPYKCKNILIQGVTIKNSPFWLMNPVLCKSVTVDKVNFSS--HGPNSDGCDPESCDHVHI 279
Query: 257 EDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDV 316
++ +GDDC+A+KSG + G +VG+P+Q+++I + + +GSE+SGG+ +V
Sbjct: 280 KNCVFDTGDDCIAIKSGRNADGRRVGVPSQNIVIENC-HMKEGHGGVVIGSEISGGVNNV 338
Query: 317 RAEDIT--AINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYV-----FWMTGDYGSHP 369
++ T + + + +RIKT RG ++ I +R + + T+K ++ GD G
Sbjct: 339 FVQNCTMDSPHLERAIRIKTNSVRGGLIEHIRIRNVDVGTVKNAVVINFYYEEGDAGQ-- 396
Query: 370 DPGFDPKALPTVTGINYRDMVADNVTQSA-KLDGIRNDPFTGICISN 415
FD PTV I ++ NV A L+G P I N
Sbjct: 397 ---FD----PTVRDIQIENLHCKNVLSKAFYLNGFERAPINDIHFKN 436
>gi|312130362|ref|YP_003997702.1| glycoside hydrolase [Leadbetterella byssophila DSM 17132]
gi|311906908|gb|ADQ17349.1| glycoside hydrolase family 28 [Leadbetterella byssophila DSM 17132]
Length = 775
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 191/432 (44%), Gaps = 71/432 (16%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
RK + + +G DG T NT A AI +L+ A GG +++P G W+TG L S+
Sbjct: 264 RKDTFNIVRYGAKADGFTVNTTAIAQAI-DLAHEA--GGGTVLIPAGVWVTGPLKLKSNV 320
Query: 113 TLYIHKDALLLASQDESEWPLLPP---------------------LPSYGRGRDEPGGRF 151
L++ K ALL S + ++P++ + G+G + G
Sbjct: 321 NLHLQKGALLQFSNNRDDYPIVETTWEGQKALRCHAPIWAVGQVNIAITGQGIMDGSGEV 380
Query: 152 SSLIFGTNLTD-----VVVTGGNATINGQGEPW-------------------WIKYRKKQ 187
+ LT +V +GG + +G+ W W++ + +
Sbjct: 381 WKQVKKNKLTSTQWRKLVESGG--VVGKKGDAWYPSEQSRYGNEDVRDWANLWVEGKTLE 438
Query: 188 FNVT-----RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPN 242
+T RP +I + +NV I +T +SP+W +HP+ S ++ ++ + +R P N
Sbjct: 439 DYMTVKDFLRPNMISITECENVLIEGVTFQNSPAWTLHPLLSKHITLRNVNVRNPWFGQN 498
Query: 243 TDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAA 302
D ++ +SC+ ++ +GDD + +KSG DE G K G+PT+++II+ +
Sbjct: 499 NDALDLESCSYAIVDGCTFDTGDDAITLKSGRDEQGRKRGVPTENVIIKN-TTVFHGHGG 557
Query: 303 IALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMT 362
+GSEMSGG+K+V ++ + + T G+R KT RG V+ IY+ + M + +
Sbjct: 558 FVIGSEMSGGVKNVFVDNCSFLGTDIGLRFKTKRDRGGVVENIYISNIAMNNIPGEAILF 617
Query: 363 GDYGSHPDP---GFDPKALPTVT------------GINYRDMVADNVTQSAKLDGIRNDP 407
Y DP D ALP + +++V+ + L G+ P
Sbjct: 618 DMYYEAKDPVPLDGDSHALPVIAPQPVNEGTPQFKNFYIKNVVSHGAVSAIVLRGLPEMP 677
Query: 408 FTGICISNVTIK 419
GI I + K
Sbjct: 678 IRGIKIEDSHFK 689
>gi|390436865|ref|ZP_10225403.1| polygalacturonase [Pantoea agglomerans IG1]
Length = 430
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 180/383 (46%), Gaps = 41/383 (10%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DF V D + +T+A AI + ++ G +++P G++LTG+ L S TL + K
Sbjct: 6 IIDFDAVPDATSLSTQAIQRAIDSAAE-----GDTVLIPAGRFLTGALFLKSKMTLELAK 60
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
DA+LL SQ ++P + + G D + + + N V G+ T++GQG
Sbjct: 61 DAVLLGSQQLEDYP---EIATRVAGIDMV---WPTAMLNINQCRNVTVCGSGTLDGQGAV 114
Query: 179 WWIK-------------YRKK------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNV 219
WW K Y ++ ++ RP + V S+ V + + T DS WN+
Sbjct: 115 WWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNLVVYQSECVTLQDFTSKDSGFWNL 174
Query: 220 HPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGI 279
H YS V +Q L + P+TDGI+ DS R+E + DD + VKSG
Sbjct: 175 HVCYSKQVNLQRLNVMNAT-GPSTDGIDIDSSQLVRVEGCTVSCNDDNICVKSGRGAEAQ 233
Query: 280 KVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG 339
++ + +IIR C + I LGSE SGGI++V E T G RIK+A RG
Sbjct: 234 QLARTARDIIIRD--CTLLKGSGITLGSETSGGIENVIIEHNRFSGTGVGFRIKSARNRG 291
Query: 340 AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAK 399
++K I VR + M+ + Y F + ++ P + + T +R + A VT A
Sbjct: 292 GWIKNIIVRHLIMEDVGYPFMLQLNW--FPQYSYSEQPADTEQPSYWRKLAA-GVTGDAG 348
Query: 400 LDGIRNDPFTGICISNVTIKLTE 422
L + N I IS+++ LT+
Sbjct: 349 LTRVEN-----IRISHISSSLTQ 366
>gi|408672530|ref|YP_006872278.1| glycoside hydrolase family 28 [Emticicia oligotrophica DSM 17448]
gi|387854154|gb|AFK02251.1| glycoside hydrolase family 28 [Emticicia oligotrophica DSM 17448]
Length = 789
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 162/342 (47%), Gaps = 64/342 (18%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
RK + ++ +G DG T NTKA N AI + A GG ++VP G W+TG L S+
Sbjct: 275 RKDTFNISRYGAKADGITVNTKAINQAIEICN---AAGGGTVLVPKGLWVTGPIVLKSNV 331
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
L++ K ALL S++ ++P++ L ++ + R + I+G +L ++ +T G +
Sbjct: 332 NLHLEKGALLQFSKNYDDYPIV--LTTW---EGQESYRCQAPIWGVDLENIAIT-GEGVL 385
Query: 173 NGQGEPWWIKYRKKQ----------------------------------------FNVTR 192
+G G+ W R+KQ N +
Sbjct: 386 DGGGDAWRAIKREKQTAGQWANLIKSGGVVDEKQNNWYPSEKSLKGNMIPNAGRILNGVK 445
Query: 193 P----------YLIEVMFS----DNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
P +L M S N+ I +T +SP+W +HP+ ++ ++ + + P
Sbjct: 446 PTPEELASYKDFLRPNMLSLTRCKNIIIEGVTFQNSPAWTMHPLLCEHITVKNVNVSNPW 505
Query: 239 DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISP 298
+ N+D I+ +SC N +E +GDD + +KSG DE G K G+PT++ +I+ I
Sbjct: 506 YAQNSDAIDLESCRNGVLEGCTFSTGDDGITIKSGRDEQGRKRGVPTENFVIKDCIVYHA 565
Query: 299 DSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGA 340
+GSEMSGG++++ D T + + G+R KTA GRG
Sbjct: 566 -HGGFVIGSEMSGGVRNMFISDCTFMGSDVGLRFKTARGRGG 606
>gi|313221288|emb|CBY32045.1| unnamed protein product [Oikopleura dioica]
Length = 278
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/222 (37%), Positives = 126/222 (56%), Gaps = 9/222 (4%)
Query: 97 PPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRD----EPGGRFS 152
P K S L S+ TL K ++AS +E ++ ++P LPSY RD +
Sbjct: 58 PAEKIEIASLELRSNLTLNFPKGCEIIASANEDDYQIMPTLPSYCIARDGLAASKDALYR 117
Query: 153 SLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLI 212
S+ +G N+ +VV TG ING+G WW + + RP L + +F N +I LT
Sbjct: 118 SVFYGENVENVVFTG-EGLINGEGVNWWTR-NSQNLKFERPRLFQCLFCKNFKIEKLTWK 175
Query: 213 DSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKS 272
+SP W +H VYS N+ I + I A +S NTDGI+ DS +N I D ++ GDD +A+KS
Sbjct: 176 NSPFWTIHFVYSENIEIADVAILAEHESRNTDGIDIDSSSNVHIHDVFVDVGDDVIALKS 235
Query: 273 GWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIK 314
G+D G + GMPT+++++ + I+ + A+GSEMSGG++
Sbjct: 236 GFDFCGREFGMPTKNVLVENSVFINEN---FAIGSEMSGGVQ 274
>gi|298385027|ref|ZP_06994586.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298262171|gb|EFI05036.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 528
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 188/425 (44%), Gaps = 72/425 (16%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG + DG T NT+A N AI +S + GG ++I+P G WLTG L S+ LY K
Sbjct: 61 IRDFGALSDGVTLNTEAINNAIKAVS---SKGGGKVIIPEGLWLTGPVVLLSNVNLYAEK 117
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATING---- 174
+AL++ S D S +P+ + + G D R S I N ++ +TG N +G
Sbjct: 118 NALIVFSSDTSLYPI---IDTSFEGLDTK--RCQSPISAMNAENIAITG-NGVFDGAGDR 171
Query: 175 --------------------------QGEPWW------------IKYRKKQFNVT----- 191
G+ W+ Q +T
Sbjct: 172 WRPVKKDKMTERQWKNLVSSGGKVDENGKVWYPDAGALKASVLMTGQNNGQKEITDEEWT 231
Query: 192 ------RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
RP ++ ++ S + + +T +SP W +HP+ ++ + + + P S N D
Sbjct: 232 YMKSWLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWYSQNGDA 291
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
++ +SC N + + + +GDD + +KSG DE G + G +++II+ + +
Sbjct: 292 LDVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGESCENVIIKNNTVLH-GHGGFVI 350
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM-------KTMKYV 358
GSEMSGG+++V + + T G+R K+ GRG V+ I++ + M TM +
Sbjct: 351 GSEMSGGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINMIDIPNDALTMD-L 409
Query: 359 FWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
++ D+ P P + + P I +++ ++ +G+ P I I N+T+
Sbjct: 410 YYAVNDFPETPIPDVNEET-PVFRNIYISNVLCRGAGRAVYFNGLPEMPLKNIFIKNMTV 468
Query: 419 KLTEK 423
+K
Sbjct: 469 TNAKK 473
>gi|300728229|ref|ZP_07061597.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299774464|gb|EFI71088.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 856
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 203/432 (46%), Gaps = 80/432 (18%)
Query: 58 VLTDFGGVGDGKTS-NTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYI 116
V+T +G + N KA N I+ SK GG +I+P G + TG+ + SH L +
Sbjct: 46 VVTKYGASEKASAAANQKAINRVIAMASK---KGGGNVIIPKGTYSTGAITMLSHVNLVV 102
Query: 117 HKDALLLASQDESEWPLLPPLPSYGRGRDEPGG----RFSSLIFGTNLTDVVVTGGNATI 172
+ A L + + +PL+ R G +S I+ TD+ +TG TI
Sbjct: 103 EEGATLHFAFEPKLYPLV---------RTSWEGLACWNYSPCIYAYKATDIAITG-KGTI 152
Query: 173 NGQG--EPWW----------------------------------IKYRKKQFNV---TRP 193
+G G + WW + + +++F + RP
Sbjct: 153 DGGGSNDTWWPMNGNPKFGYKPGITKESQKLGSRAKLMKMAENDVPFDERKFGMGQGLRP 212
Query: 194 YLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTN 253
LI + S+N+ I ++TL+ SP W +HP+ N+ + G+ I + PN DG +P++C N
Sbjct: 213 QLINFVRSENILIKDVTLLRSPFWVIHPLLCKNITVDGVQIWN--EGPNGDGCDPEACEN 270
Query: 254 TRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGG 312
I++ +GDDC+A+KSG + G G P++++IIR C D + +GSE+SGG
Sbjct: 271 VIIQNTLFHTGDDCIAIKSGRNNDGRFWGKPSKNIIIRN--CKMEDGHGGVVIGSEISGG 328
Query: 313 IKDVRAED--ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-YVFWMTGDYGSHP 369
++V AE+ + + N + +RIKT RG ++ I +R + + K V + DY ++
Sbjct: 329 CENVYAENCYMDSPNLERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAVLKINLDYENNE 388
Query: 370 D--PGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRN-DPFTGICISNVT--------I 418
D GF+ PTV +N ++ + + G+ N D I + N T +
Sbjct: 389 DCYRGFE----PTVRNVNMENVTCEKSEYGVLMIGLDNVDNIYDINLKNCTFNGVIKQPV 444
Query: 419 KLTEKPKELQWN 430
K+T + K++ ++
Sbjct: 445 KVTGRTKDVHYD 456
>gi|423288978|ref|ZP_17267829.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|423294865|ref|ZP_17272992.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
gi|392668742|gb|EIY62236.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|392676056|gb|EIY69497.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
Length = 524
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 191/416 (45%), Gaps = 64/416 (15%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAAD-GGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
+ DFG DG T NT+A N AI K D GG ++I+P G WLTG L S+ L+
Sbjct: 60 ICDFGAKSDGVTLNTEAINKAI----KVVHDKGGGKVIIPEGLWLTGPIVLQSNVNLHAE 115
Query: 118 KDALLLASQDESEWPLL-------------PPLPSY--------GRGRDEPGGRFSSLIF 156
K+AL++ S D S +P++ P+ + G G + G +
Sbjct: 116 KNALIVFSGDTSLYPIITTSFEGLDTRRCQSPISAMNAENIAITGYGVFDGAGDRWRPVK 175
Query: 157 GTNLTD-----VVVTGGNATINGQGEPWW-----IKYR-------KKQFNVT-------- 191
+TD +V +GGN NG+ W+ +K +Q +T
Sbjct: 176 KDKMTDRQWKNLVNSGGNVDENGK--VWYPNEGALKASVLMSGQGNQQAEITSEEWEEMK 233
Query: 192 ---RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINP 248
RP L+ ++ S V + +T +SPSW +HP+ ++++ + + P S N D ++
Sbjct: 234 SWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGDALDV 293
Query: 249 DSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSE 308
+SC N I + + +GDD + +KSG DE G + G P +++I+R + +GSE
Sbjct: 294 ESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLH-GHGGFVIGSE 352
Query: 309 MSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKT------MKYVFWMT 362
MSGG+K+V + + I T G+R K+A GRG V+ IY+ + M + +++
Sbjct: 353 MSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADLYYAA 412
Query: 363 GDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
P P + P I D+ ++A L+G+ P I I N+ +
Sbjct: 413 KSAPGEPIPSVSEET-PAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNMVV 467
>gi|383114359|ref|ZP_09935123.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
gi|313693935|gb|EFS30770.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
Length = 524
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 191/416 (45%), Gaps = 64/416 (15%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAAD-GGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
+ DFG DG T NT+A N AI K D GG ++I+P G WLTG L S+ L+
Sbjct: 60 ICDFGAKSDGVTLNTEAINKAI----KVVHDKGGGKVIIPEGLWLTGPIVLQSNVNLHAE 115
Query: 118 KDALLLASQDESEWPLL-------------PPLPSY--------GRGRDEPGGRFSSLIF 156
K+AL++ S D S +P++ P+ + G G + G +
Sbjct: 116 KNALIVFSGDTSLYPIITTSFEGLDTRRCQSPISAMNVENIAITGYGVFDGAGDRWRPVK 175
Query: 157 GTNLTD-----VVVTGGNATINGQGEPWW-----IKYR-------KKQFNVT-------- 191
+TD +V +GGN NG+ W+ +K +Q +T
Sbjct: 176 KDKMTDRQWKNLVNSGGNVDENGK--VWYPNEGALKASVLMSGQGNQQAEITSEEWEEMK 233
Query: 192 ---RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINP 248
RP L+ ++ S V + +T +SPSW +HP+ ++++ + + P S N D ++
Sbjct: 234 SWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGDALDV 293
Query: 249 DSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSE 308
+SC N I + + +GDD + +KSG DE G + G P +++I+R + +GSE
Sbjct: 294 ESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLH-GHGGFVIGSE 352
Query: 309 MSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKT------MKYVFWMT 362
MSGG+K+V + + I T G+R K+A GRG V+ IY+ + M + +++
Sbjct: 353 MSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADLYYAA 412
Query: 363 GDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
P P + P I D+ ++A L+G+ P I I N+ +
Sbjct: 413 KSAPGEPIPSVSEET-PAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNMVV 467
>gi|237717974|ref|ZP_04548455.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229452776|gb|EEO58567.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 524
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 191/416 (45%), Gaps = 64/416 (15%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAAD-GGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
+ DFG DG T NT+A N AI K D GG ++I+P G WLTG L S+ L+
Sbjct: 60 ICDFGAKSDGVTLNTEAINKAI----KVVHDKGGGKVIIPEGLWLTGPIVLQSNVNLHAE 115
Query: 118 KDALLLASQDESEWPLL-------------PPLPSY--------GRGRDEPGGRFSSLIF 156
K+AL++ S D S +P++ P+ + G G + G +
Sbjct: 116 KNALIVFSGDTSLYPIITTSFEGLDTRRCQSPISAMNAENIAITGYGVFDGAGDRWRPVK 175
Query: 157 GTNLTD-----VVVTGGNATINGQGEPWW-----IKYR-------KKQFNVT-------- 191
+TD +V +GGN NG+ W+ +K +Q +T
Sbjct: 176 KDKMTDRQWKNLVNSGGNVDENGK--VWYPNEGALKASVLMSGQGNQQAEITSEEWEEMK 233
Query: 192 ---RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINP 248
RP L+ ++ S V + +T +SPSW +HP+ ++++ + + P S N D ++
Sbjct: 234 SWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGDALDV 293
Query: 249 DSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSE 308
+SC N I + + +GDD + +KSG DE G + G P +++I+R + +GSE
Sbjct: 294 ESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLH-GHGGFVIGSE 352
Query: 309 MSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKT------MKYVFWMT 362
MSGG+K+V + + I T G+R K+A GRG V+ IY+ + M + +++
Sbjct: 353 MSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADLYYAA 412
Query: 363 GDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
P P + P I D+ ++A L+G+ P I I N+ +
Sbjct: 413 KSAPGEPIPSVSEET-PAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNMVV 467
>gi|189466414|ref|ZP_03015199.1| hypothetical protein BACINT_02789 [Bacteroides intestinalis DSM
17393]
gi|189434678|gb|EDV03663.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 467
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 187/380 (49%), Gaps = 54/380 (14%)
Query: 16 VIKILSTLLTLGLLSPQVAEC-RPTKNSYTIEFQALNCR--KHSAVLTDFGGVGDGKTSN 72
V+ I+S LL+ L + + + K S IE Q K + ++TDFG D +
Sbjct: 4 VLGIISLLLSTTLATANSIDFDKAFKESAKIEKQIKKTSFPKQTYLITDFGAKPDTPDAP 63
Query: 73 T-KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEW 131
+A N AI +GG ++VP G + TG L S+ ++ + A+L S D+S +
Sbjct: 64 CHEAINQAIVTC---CLNGGGTVVVPKGTFYTGPITLKSNVNFHVEEGAVLRFSTDQSLY 120
Query: 132 PLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG--EPWWI-----KYR 184
P + + G D LI+ T++ +TG TI+GQG E WW +Y
Sbjct: 121 --FPGVITRWEGIDCYNAH--PLIYAYGETNIAITG-KGTIDGQGSNETWWPMCGAPRYG 175
Query: 185 KKQFNVT------------------------------RPYLIEVMFSDNVQISNLTLIDS 214
K+ V RP LI + + V I ++TL++S
Sbjct: 176 WKEGMVAQRNGGRERLLMYGETSTPIYKRVMTPEDGLRPQLINLYSCNTVLIEDVTLLNS 235
Query: 215 PSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGW 274
P W +HP++ ++ ++G+ + PN DG +P+SC N IE+ +GDDC+A+KSG
Sbjct: 236 PFWVIHPLFCESLTVRGVYVYN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGR 293
Query: 275 DEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAED--ITAINTQSGVRI 332
++ G K G+P++++I+R + + +GSE+SGG +++ E+ + + + +RI
Sbjct: 294 NQDGRKWGIPSENIIVRGCY-MKKGHGGVVIGSEISGGYRNLYVENCKMDSPDLDRVIRI 352
Query: 333 KTAVGRGAYVKEIYVRRMTM 352
KT+ RG ++ ++VR +T+
Sbjct: 353 KTSTCRGGLIENVFVRNVTV 372
>gi|383120469|ref|ZP_09941197.1| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
gi|382985005|gb|EES68560.2| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
Length = 528
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 187/424 (44%), Gaps = 70/424 (16%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG + DG T NT+A N AI ++ + GG ++I+P G WLTG L S+ LY K
Sbjct: 61 IRDFGALSDGVTLNTEAINNAIKAVN---SKGGGKVIIPEGLWLTGPVVLLSNVNLYAEK 117
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGN--------- 169
+AL++ S D S +P+ + + G D R S I N ++ +TG
Sbjct: 118 NALIVFSSDTSLYPI---IDTSFEGLDTK--RCQSPISAMNAENIAITGSGVFDGAGDRW 172
Query: 170 --------------------ATINGQGEPWW------------IKYRKKQFNVT------ 191
++ G+ W+ Q +T
Sbjct: 173 RPVKKDKMTERQWKNLVSSGGKVDENGKVWYPDAGALKASVLMTGQNNGQKEITDEEWTY 232
Query: 192 -----RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGI 246
RP ++ ++ S + + +T +SP W +HP+ ++ + + + P S N D +
Sbjct: 233 MKSWLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWYSQNGDAL 292
Query: 247 NPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALG 306
+ +SC N + + + +GDD + +KSG DE G + G P +++II+ + +G
Sbjct: 293 DVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKNNTVLH-GHGGFVIG 351
Query: 307 SEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM-------KTMKYVF 359
SEMSGG+++V + + T G+R K+ GRG V+ I++ + M TM ++
Sbjct: 352 SEMSGGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINMIDIPNDALTMD-LY 410
Query: 360 WMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
+ D P P + + P I +++ ++ +G+ P I I N+T+
Sbjct: 411 YAVNDSPETPIPDVNEET-PVFRNIYISNVLCRGAGRAVYFNGLPEMPLKNIFIKNMTVT 469
Query: 420 LTEK 423
+K
Sbjct: 470 NAKK 473
>gi|159040816|ref|YP_001540068.1| glycoside hydrolase [Caldivirga maquilingensis IC-167]
gi|157919651|gb|ABW01078.1| glycoside hydrolase family 28 [Caldivirga maquilingensis IC-167]
Length = 462
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 184/414 (44%), Gaps = 66/414 (15%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ ++G G +T A N AI+ A++ + +PPG +L+ + L S+ L I K
Sbjct: 13 VVEYGADPKGLDDSTGAINEAITQ----ASETRGIVYIPPGNYLSRNIILRSNVMLLIDK 68
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG-- 176
A++ S D +P++ + G G LIFG ++ +V + G +GQG
Sbjct: 69 GAVVKFSTDYKSYPIIE---TRREGVHHCG--VMPLIFGKDVRNVRIIG-EGVFDGQGYA 122
Query: 177 ----------------------------EPWW---------IKYRK-------------- 185
+ WW +RK
Sbjct: 123 WWPIRRFRVTEDYWRRLVESGGVVGDDGKTWWPTRNAMEGAEAFRKITSEGGKPSTEDCE 182
Query: 186 KQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
+ RP L+++ ++NV I +T DSP W +H +YS +V + + AP SPNTDG
Sbjct: 183 RYREFFRPQLLQLYNAENVTIEGVTFKDSPMWTIHILYSRHVTLINTSSIAPDYSPNTDG 242
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
+ DS ++ + I GDDC+ +KSG DE G ++G+P++++ + + +
Sbjct: 243 VVVDSSSDVEVRGCMIDVGDDCLVIKSGRDEEGRRIGIPSENIHASGCL-MKRGHGGFVI 301
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGD 364
GSEMSGG+++V +D T+ GVRIKT GRG ++ +YV + M+ + + +
Sbjct: 302 GSEMSGGVRNVSIQDSVFDGTERGVRIKTTRGRGGLIENVYVNNIYMRNIIHEAVVVDMF 361
Query: 365 YGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
Y P + P + G+ R+ D Q+ ++G+ P I I N I
Sbjct: 362 YEKRPVEPVSERT-PKIRGVVIRNTSCDGADQAVLINGLPEMPIEDIIIENTRI 414
>gi|407700954|ref|YP_006825741.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Black Sea 11']
gi|407250101|gb|AFT79286.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Black Sea 11']
Length = 476
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 173/366 (47%), Gaps = 38/366 (10%)
Query: 83 LSKYAADGGAQLIVPPGKW-LTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYG 141
+ + +A GG ++VP G W + G L S L++ + A LL S D S + LP + +
Sbjct: 88 IDEASASGGGIVVVPKGTWQVDGPIRLKSKVNLHLEEGATLLFSGDPSHY--LPVVKTRW 145
Query: 142 RGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKY------------------ 183
G + +S LI+ N+ DV +TG TI+G + +I +
Sbjct: 146 EGTEVF--TYSPLIYALNVEDVAITG-KGTIDGNAQSAFIGWYEKQNTDMHALRKMGFDG 202
Query: 184 ---RKKQF---NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAP 237
K+QF + RP LI+ + V + + T ++SP W H VY+S+ ++ + + +
Sbjct: 203 VPVEKRQFGEGHYLRPPLIQFFHAKRVLLEDYTALNSPFWVNHLVYTSHATVRRVKVESH 262
Query: 238 IDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
+ N DG++ +S EDN+ +GDD + +KSG D G +G+P+ ++ R
Sbjct: 263 L--YNNDGLDIESSQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVARNNDLGG 320
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
D I LGSEMSGGIK V E+ S R K+ + RG V+ I +R + + K+
Sbjct: 321 ED--GIGLGSEMSGGIKRVFFENNVLQEGDSAYRFKSNLDRGGRVEMIRIRGSKVASFKH 378
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
+FW +Y S+ F T T I D+ +NV ++ P + ++T
Sbjct: 379 LFWFQLNYPSNLHGNFP----ATYTDIIIEDLTVENVGTVLEIHAPDAAPVHNVKFKDIT 434
Query: 418 IKLTEK 423
IK E+
Sbjct: 435 IKKAEE 440
>gi|393783422|ref|ZP_10371595.1| hypothetical protein HMPREF1071_02463 [Bacteroides salyersiae
CL02T12C01]
gi|392668855|gb|EIY62348.1| hypothetical protein HMPREF1071_02463 [Bacteroides salyersiae
CL02T12C01]
Length = 468
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 183/381 (48%), Gaps = 54/381 (14%)
Query: 15 HVIKILSTLLTLGLLSPQVAEC-RPTKNSYTIEFQALNCR--KHSAVLTDFGGVGDGKTS 71
+ LS LLT + S + + K S IE Q K + +TDFG D ++
Sbjct: 3 RIFGFLSLLLTAAITSANPIDFDKAFKESKKIEKQIKQTSFPKQTYHITDFGAKADNESV 62
Query: 72 NT-KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESE 130
+A N AI S GG +IVP G + TG L S+ ++ + A+L D+S
Sbjct: 63 PCHEAINQAILQCS---LTGGGTVIVPKGTFYTGPITLKSNVNFHLEEGAVLKFLTDQSL 119
Query: 131 WPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG--EPWW-----IKY 183
+ P + + G D R LI+ T++ +TG TI+GQG + WW KY
Sbjct: 120 Y--FPGVITRWEGLDCYNAR--PLIYAYGETNIAITG-KGTIDGQGSNDTWWPMCGAAKY 174
Query: 184 RKKQFNVT------------------------------RPYLIEVMFSDNVQISNLTLID 213
K+ V RP LI + + I ++TL++
Sbjct: 175 GWKEGMVAQRNGGRERLLMYGETSTPIYKRVMTPEDGLRPQLINLYSCHTILIEDVTLLN 234
Query: 214 SPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSG 273
SP W +HP++ +++++G+ I PN DG +P+SC N IE+ +GDDC+A+KSG
Sbjct: 235 SPFWVIHPLFCESLIVRGVNIFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSG 292
Query: 274 WDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAED--ITAINTQSGVR 331
+ G K +P++++I+R + + +GSE+SGG +++ E+ + + N +R
Sbjct: 293 RNADGRKWNIPSENIIVRNCK-MKNGHGGVVIGSEISGGYRNLFVENCQMDSPNLDRVIR 351
Query: 332 IKTAVGRGAYVKEIYVRRMTM 352
IKT+ RG ++ ++VR +T+
Sbjct: 352 IKTSTCRGGIIENVFVRDITV 372
>gi|160886912|ref|ZP_02067915.1| hypothetical protein BACOVA_04926 [Bacteroides ovatus ATCC 8483]
gi|156107323|gb|EDO09068.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 518
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 191/416 (45%), Gaps = 64/416 (15%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAAD-GGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
+ DFG DG T NT+A N AI K D GG ++I+P G WLTG L S+ L+
Sbjct: 54 ICDFGAKSDGVTLNTEAINKAI----KVVHDKGGGKVIIPEGLWLTGPIVLQSNVNLHAE 109
Query: 118 KDALLLASQDESEWPLL-------------PPLPSY--------GRGRDEPGGRFSSLIF 156
K+AL++ S D S +P++ P+ + G G + G +
Sbjct: 110 KNALIVFSGDTSLYPIITTSFEGLDTRRCQSPISAMNAENIAITGYGVFDGAGDRWRPVK 169
Query: 157 GTNLTD-----VVVTGGNATINGQGEPWW-----IKYR-------KKQFNVT-------- 191
+TD +V +GGN NG+ W+ +K +Q +T
Sbjct: 170 KDKMTDRQWKNLVNSGGNVDENGK--VWYPNEGALKASVLMSGQGNQQAEITSEEWEEMK 227
Query: 192 ---RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINP 248
RP L+ ++ S V + +T +SPSW +HP+ ++++ + + P S N D ++
Sbjct: 228 SWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGDALDV 287
Query: 249 DSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSE 308
+SC N I + + +GDD + +KSG DE G + G P +++I+R + +GSE
Sbjct: 288 ESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLH-GHGGFVIGSE 346
Query: 309 MSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKT------MKYVFWMT 362
MSGG+K+V + + I T G+R K+A GRG V+ IY+ + M + +++
Sbjct: 347 MSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADLYYAA 406
Query: 363 GDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
P P + P I D+ ++A L+G+ P I I N+ +
Sbjct: 407 KSAPGEPIPSVSEET-PAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNMVV 461
>gi|410636673|ref|ZP_11347265.1| polygalacturonase, putative, pga28A [Glaciecola lipolytica E3]
gi|410143760|dbj|GAC14470.1| polygalacturonase, putative, pga28A [Glaciecola lipolytica E3]
Length = 476
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 202/421 (47%), Gaps = 65/421 (15%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG + ++ A AI+++ A+ GG ++VP G++ TG +L S+ L+I +
Sbjct: 64 IKDFGAKPGKQNDSSMAIRAAIADV---ASAGGGTVLVPAGEFYTGPVHLESNINLHIAQ 120
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE- 177
A+L + + P + + G + G S LI+ T+V VT G + G G
Sbjct: 121 GAVLHFYPEPERYK--PYVFTRWEGTELMG--LSPLIYAFEKTNVAVT-GKGILEGGGSH 175
Query: 178 ----PWWIKYRKKQF--------------------------------NVTRPYLIEVMFS 201
PW K+++ ++ N RP I+ +
Sbjct: 176 THWWPWKGKWKEAEWGDHPVENQKFTRDPLREMAENEVPVAQRVFDDNYLRPPFIQPIRC 235
Query: 202 DNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYI 261
NV I +T+ +SP W V+PV NV +QG+ + PN+DG +P++C + I++
Sbjct: 236 KNVLIEGVTIKNSPFWLVNPVLCENVTVQGIHCESY--GPNSDGCDPEACKDVLIQNCIF 293
Query: 262 VSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAE-- 319
+GDDC+A+KSG + G +VG+ +++++I + + +GSE+SGG++++ +
Sbjct: 294 DTGDDCIAIKSGRNADGRRVGVASENILIENC-QMKAGHGGVVIGSEISGGVRNLYVDNC 352
Query: 320 DITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-----YVFWMTGDYGSHPDPGFD 374
++++ + G+RIKT RG ++K + R + + +K ++ GD G
Sbjct: 353 EMSSPDLDRGIRIKTNSIRGGHLKNLNYRNINIGQVKDAIVINFYYEEGDVG-------- 404
Query: 375 PKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNI 434
K P + I ++ ++ T++ L G + P TG+ + N+T +K ++ N NI
Sbjct: 405 -KFTPVLEDIRIENLWVEHATRAFSLRGYPHTPITGVTLKNLTFVKVDKDPIIE-NVANI 462
Query: 435 Q 435
+
Sbjct: 463 K 463
>gi|323451042|gb|EGB06920.1| hypothetical protein AURANDRAFT_65104 [Aureococcus anophagefferens]
Length = 915
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 166/335 (49%), Gaps = 68/335 (20%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGK-WLTGSFNLTSHFTLYIH 117
+ D G VGDG+T +++A +A++ A D ++++P + ++G NLTS+ L +
Sbjct: 381 VADHGAVGDGQTDDSRALRSALA-----ACD---EVVIPRHRSCVSGPLNLTSNQVLRV- 431
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRD--------------EPGGRFSSLIFGTNLTDV 163
D LLAS +++PL+ P+ YG RD E R + ++ N ++V
Sbjct: 432 -DGALLASTIPAQYPLMEPVVGYGWSRDTNCFPANSTRRGFREGARRHAPVVGAYNASNV 490
Query: 164 VVTGGNATINGQGEP--WW---IKYRKKQ-------------FNVTRPYLIEVMFSDNVQ 205
V GG GEP WW + R + +RP L+E + +
Sbjct: 491 SVVGGGVIDGRAGEPLGWWDNCTRCRGARPPDPAFPPDEAFCLAASRPKLLEFQYVTGLT 550
Query: 206 ISN------LTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSP---NTDGINPDSCTNTRI 256
++ L L DSP W + P YS NV ++ L I API +P NTDG+
Sbjct: 551 VAGNAVGDPLHLKDSPFWTLTPSYSRNVRVRDLRITAPIRTPGIGNTDGV---------- 600
Query: 257 EDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLIC----ISPDSAAIALGSEMSGG 312
E+ Y+ + DD V +KSG D +GI + +PT+ +++R + C A+GSEMSGG
Sbjct: 601 ENVYVNNSDDGVCMKSGLDGFGINLAIPTEDVLVRNITCGDRRDDAGRGGFAVGSEMSGG 660
Query: 313 IKDVRAED-ITAINTQS-GVRIKTAVGRGAYVKEI 345
+++V D + QS G+ +KT+VGRG Y+ ++
Sbjct: 661 VRNVTFRDSVLGAGPQSRGIDVKTSVGRGGYIIDV 695
>gi|407700483|ref|YP_006825270.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'Black Sea 11']
gi|407249630|gb|AFT78815.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'Black Sea 11']
Length = 488
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 197/415 (47%), Gaps = 67/415 (16%)
Query: 54 KHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLT-GSFNLTSHF 112
K A + DF + + +A + AIS + A+ GG +++VP G WL G +L S+
Sbjct: 69 KRQANVVDFLAIHNNDFK--QALHDAISQI---ASQGGGKVVVPKGNWLCKGPIHLQSNI 123
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
L++ A + S + ++ P + + G + G +S LI+ T++ +TG T+
Sbjct: 124 NLHVELGATIQFSTNPDDYK--PYVFTRWEGMELMG--YSPLIYAYEQTNIAITG-KGTL 178
Query: 173 NG--QGEPWW-----------------------------------IKYRKKQFNVTRPYL 195
+G + WW + R + N RP
Sbjct: 179 DGCAAKDNWWPWKGKWKASTWGDDPVENQKYTRDTLQEMVERGTPVSERVFEKNYLRPPF 238
Query: 196 IEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTR 255
I+ +NV I +T++ SP W V+PV NV + + ++ PN+DG +P+SCTN
Sbjct: 239 IQPYRCENVLIEGVTILRSPFWLVNPVLCKNVTVNDVYCKS--FGPNSDGCDPESCTNVI 296
Query: 256 IEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKD 315
I + +GDDC+A+KSG + G +V +P ++II + + +GSE+SGG+++
Sbjct: 297 ISNCTFDTGDDCIAIKSGRNADGRRVNVPCSNIIIEHCE-MKAGHGGVVIGSEISGGVEN 355
Query: 316 VRAE--DITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-----YVFWMTGDYGSH 368
+ A+ +++ + G+RIKT RG ++K + R + + T+K F+ GD G+
Sbjct: 356 LYAQYCTMSSPDLDRGIRIKTNSIRGGHLKNLNYRNIDIGTVKDAVVVNFFYEEGDAGNF 415
Query: 369 PDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEK 423
P P + I ++ + ++ L G + P +G+ ++NVTIK +K
Sbjct: 416 P---------PLLEDITIENLNVVSANRAFVLRGYDHTPISGLTLNNVTIKHAQK 461
>gi|266623864|ref|ZP_06116799.1| exo-poly-alpha-D-galacturonosidase [Clostridium hathewayi DSM
13479]
gi|288864322|gb|EFC96620.1| exo-poly-alpha-D-galacturonosidase [Clostridium hathewayi DSM
13479]
Length = 438
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 183/392 (46%), Gaps = 57/392 (14%)
Query: 79 AISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLP 138
A+ L + G L++ G +LT L + + + A+L + DE++ P++P
Sbjct: 23 ALQALIDETSQAGGILVLEKGTYLTAPLFLKNGMEFHFEEGAVLKGTTDETKIPVIPTRA 82
Query: 139 SYGRGRD-EPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKY-------------R 184
+ G G D PG + N V+ GN TI+GQGE WW KY
Sbjct: 83 A-GIGMDWYPG------VLNCNGQKDVIISGNGTIDGQGEYWWRKYWGDDGKSGMRGEYD 135
Query: 185 KK------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRA-P 237
KK ++ R + +M S + + ++T + S WN+H YS ++ + G+ I +
Sbjct: 136 KKGLRWACDYDCMRVRNVVIMESSRITLKDITSMRSGFWNIHICYSDHIHVDGIKIASCG 195
Query: 238 IDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
+SP+TDGI+ DSC + +E+ DD + +KSG D GI+V P + ++ C
Sbjct: 196 GESPSTDGIDIDSCHDVLVENCVTDCNDDSICIKSGRDADGIRVNRPCHDITVQN--CEI 253
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
+ +GSE+SGG+ + +++ T G RIK++V R Y++++ V ++M +KY
Sbjct: 254 RAGFGVTIGSEVSGGVYQITLKNLRYHGTDCGFRIKSSVARHGYIRDVRVEGLSMVNVKY 313
Query: 358 VF-----W--------MTGDY-GSHPDPGFD-----PKALP--TVTGINYRDMVADN--- 393
F W + GDY G P+ P ++P V+ I ++ A N
Sbjct: 314 PFHFFLNWNPAYSYCELPGDYEGEIPEHWKKLLEAIPDSVPKTKVSNITIENVTARNEAD 373
Query: 394 ---VTQSAKLDGIRNDPFTGICISNVTIKLTE 422
++++ ++G + P + NV++ E
Sbjct: 374 YNGISRAFHIEGFEDQPVEHVIFKNVSLACRE 405
>gi|393781473|ref|ZP_10369668.1| hypothetical protein HMPREF1071_00536 [Bacteroides salyersiae
CL02T12C01]
gi|392676536|gb|EIY69968.1| hypothetical protein HMPREF1071_00536 [Bacteroides salyersiae
CL02T12C01]
Length = 537
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 154/338 (45%), Gaps = 63/338 (18%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ +G DGK NT+A N AI ++ A GG ++I+P G WLTG L S+ LY +
Sbjct: 59 IVAYGAKNDGKFLNTEAINNAIKAVN---AKGGGKVIIPEGLWLTGPIVLLSNVNLYTER 115
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+AL+L + D +P++ R R S I N ++ +TG T +G G+
Sbjct: 116 NALILFTDDFEAYPIINTSFEGLETR-----RCQSPISARNAENIAITG-YGTFDGAGDS 169
Query: 179 W------------WIKYRK-------------------------KQFNV----------- 190
W W K K K FNV
Sbjct: 170 WRPVKKDKLTASQWGKLVKSGGVTDSAGKIWYPTAGALKGALACKDFNVPEGINTDEEWN 229
Query: 191 -----TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
RP L+ ++ S V + +T +SPSW +HP+ ++ + + + P S N D
Sbjct: 230 EIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITVNNVKVFNPWYSQNGDA 289
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
++ +SC N I ++ +GDD + +KSG D G + G P Q+++++ I + +
Sbjct: 290 LDLESCKNALIINSLFDAGDDAICIKSGKDADGRRRGEPCQNVLVKNNIVLH-GHGGFVV 348
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVK 343
GSEMSGG+K++ D T + T G+R K+ GRG V+
Sbjct: 349 GSEMSGGVKNIYVTDCTFMGTDVGLRFKSTRGRGGVVE 386
>gi|254444100|ref|ZP_05057576.1| Polygalacturonase superfamily [Verrucomicrobiae bacterium DG1235]
gi|198258408|gb|EDY82716.1| Polygalacturonase superfamily [Verrucomicrobiae bacterium DG1235]
Length = 476
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 200/426 (46%), Gaps = 73/426 (17%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R++ A GG GD +A N A GG ++VP G + TG +L S+
Sbjct: 63 REYGAEEGVVGGAGDAIAKAIEACN----------AGGGGTVLVPAGTYHTGPVHLLSNV 112
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
L++ + A L S + ++ LP + + R +S LI+ T++ VTG T+
Sbjct: 113 NLHVAEGATLKFSTEAKDY--LPAV--FTRWEGVECYNYSPLIYAFEQTNIAVTG-KGTL 167
Query: 173 NGQG--EPW--W------------------IKYRKK----------QFNVTRPYLIEVMF 200
+GQ + W W I+Y K + + RP ++
Sbjct: 168 DGQASLDNWLDWNVKSAPGGSKQIPARNRLIEYGAKGTPVDERVFGEGDFLRPNFLQPYR 227
Query: 201 SDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNY 260
DNV I ++T+I+SP W +HPV S NV ++G+T+ + N DG NP+S + IE+
Sbjct: 228 CDNVLIEDVTIINSPMWEIHPVLSRNVTVRGVTVVS--HGSNNDGCNPESSKDVLIENCV 285
Query: 261 IVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRAE 319
+GDDC+A+KSG + G +V +P++++I+R C D + +GSE+SGG+++V E
Sbjct: 286 FDTGDDCIAIKSGRNNDGRRVNVPSENIIVRN--CKMKDGHGGVVIGSEISGGVRNVFVE 343
Query: 320 --DITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK------YVFWMTGDYGSHPDP 371
++++ N +RIKT RG ++ ++VR + + +K + GD G
Sbjct: 344 NCEMSSPNLDRALRIKTNSIRGGLIENVFVRDVEVGVVKDSVIKVNFLYEEGDAGDFA-- 401
Query: 372 GFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNC 431
P V + R + + + L G + P TGI + + + ++P L
Sbjct: 402 -------PVVRNVVVRRLTSRESKYALFLKGYEHTPITGIRLIDCQFEGVQRPSVL---- 450
Query: 432 TNIQGI 437
N++G+
Sbjct: 451 LNVRGL 456
>gi|397170830|ref|ZP_10494240.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella aestuarii B11]
gi|396087304|gb|EJI84904.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella aestuarii B11]
Length = 481
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 196/427 (45%), Gaps = 68/427 (15%)
Query: 55 HSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTL 114
S +TDFG NT + ++ AA GG ++++P G++ TG+ +L S+ L
Sbjct: 65 RSFSITDFGAAAKAGFDNTA---AIAAAIAACAAAGGGRVLIPGGRFETGAIHLKSNVNL 121
Query: 115 YIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATING 174
++ D +L D + LP + + G + G +S LI+ ++ +T GN + G
Sbjct: 122 HLADDTVLSFYTDRKHY--LPYVMTRWEGVELMG--YSPLIYAYQQENIALT-GNGILEG 176
Query: 175 QG--EPWW-------------------IKYRKKQF----------------NVTRPYLIE 197
G + WW +K R F N RP I+
Sbjct: 177 NGAVDAWWPWKGDWERRNWDYDASVDQVKTRSPLFEMAERGVPVSERVFNENFLRPPFIQ 236
Query: 198 VMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIE 257
V I +T+ +SP W ++PV S +V+++ + + PN+DG NP+SC IE
Sbjct: 237 PYGCKRVLIEGVTIRNSPFWLINPVLSEDVIVRNVNCISY--GPNSDGCNPESCNRVLIE 294
Query: 258 DNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVR 317
+ +GDDC+A+KSG + G ++ P Q+++I+ I + + +GSE+SGG +++
Sbjct: 295 NCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCI-MRAGHGGVVMGSEISGGARNIF 353
Query: 318 AE--DITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-----YVFWMTGDYGSHPD 370
A +++ N G+RIKT RG ++ +Y+R + + ++ F+ GD G+
Sbjct: 354 ARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVINFFYEEGDAGNF-- 411
Query: 371 PGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWN 430
+P V ++ ++ ++ +L G P +G+ + +V T L+
Sbjct: 412 -------MPQVNNLHISNLTVQKAQRAFELRGFERAPISGVTLHHVQFNNTAALGVLE-- 462
Query: 431 CTNIQGI 437
NI GI
Sbjct: 463 --NIAGI 467
>gi|393764308|ref|ZP_10352920.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella agri BL06]
gi|392604938|gb|EIW87837.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella agri BL06]
Length = 481
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 196/427 (45%), Gaps = 68/427 (15%)
Query: 55 HSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTL 114
S +TDFG NT + ++ AA GG ++++P G++ TG+ +L S+ L
Sbjct: 65 RSFSITDFGAAAKAGFDNTA---AIAAAIAACAAAGGGRVLIPGGRFETGAIHLKSNVNL 121
Query: 115 YIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATING 174
++ D +L D + LP + + G + G +S LI+ ++ +T GN + G
Sbjct: 122 HLADDTVLSFYTDREHY--LPYVMTRWEGVELMG--YSPLIYAYQQENIALT-GNGILEG 176
Query: 175 QG--EPWW-------------------IKYRKKQF----------------NVTRPYLIE 197
G + WW +K R F N RP I+
Sbjct: 177 NGAVDAWWPWKGQWERRNWDYDASVDQVKTRSPLFEMAERGVPVSERVFNENFLRPPFIQ 236
Query: 198 VMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIE 257
V I +T+ +SP W ++PV S +V+++ + + PN+DG NP+SC IE
Sbjct: 237 PYGCKRVLIEGVTIRNSPFWLINPVLSEDVIVRNVNCISY--GPNSDGCNPESCNRVLIE 294
Query: 258 DNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVR 317
+ +GDDC+A+KSG + G ++ P Q+++I+ I + + +GSE+SGG +++
Sbjct: 295 NCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCI-MRAGHGGVVMGSEISGGARNIF 353
Query: 318 AE--DITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-----YVFWMTGDYGSHPD 370
A +++ N G+RIKT RG ++ +Y+R + + ++ F+ GD G+
Sbjct: 354 ARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVINFFYEEGDAGNF-- 411
Query: 371 PGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWN 430
+P V ++ ++ ++ +L G P +G+ + +V T L+
Sbjct: 412 -------MPQVNNLHISNLTVQKAQRAFELRGFERAPISGVTLHHVQFNNTAALGVLE-- 462
Query: 431 CTNIQGI 437
NI GI
Sbjct: 463 --NIAGI 467
>gi|407684232|ref|YP_006799406.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'English Channel 673']
gi|407245843|gb|AFT75029.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'English Channel 673']
Length = 488
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 197/415 (47%), Gaps = 67/415 (16%)
Query: 54 KHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWL-TGSFNLTSHF 112
K A +TDF + + + +A + AI +++ GG +++VP G WL +G +L S+
Sbjct: 69 KREANVTDF--LNENGSDFKQALHAAIDQVAR---QGGGKVVVPKGDWLCSGPIHLQSNI 123
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
L+I A + S + ++ P + + G + G +S LI+ +++ +T G T+
Sbjct: 124 NLHIEAGATIRFSTNPDDYK--PYVFTRWEGMELMG--YSPLIYAFEQSNIAIT-GKGTL 178
Query: 173 NGQG--EPWW-----------------------------------IKYRKKQFNVTRPYL 195
+G + WW + R + N RP
Sbjct: 179 DGSAAKDNWWPWKGKWKASTWGDDPVENQKYTRDTLQEMVENGTPVSDRVFENNYLRPPF 238
Query: 196 IEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTR 255
I+ +NV I +T++ SP W V+PV NV + + ++ PN+DG +P+SCTN
Sbjct: 239 IQPYRCENVLIEGVTILRSPFWLVNPVLCKNVTVNDVYCKS--FGPNSDGCDPESCTNVL 296
Query: 256 IEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKD 315
I + +GDDC+A+KSG + G +V +P +++I + + +GSE+SGG+++
Sbjct: 297 ISNCTFDTGDDCIAIKSGRNADGRRVNVPCSNIVIEHCE-MKAGHGGVVIGSEISGGVEN 355
Query: 316 VRAEDIT--AINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-----YVFWMTGDYGSH 368
+ A+ T + + G+RIKT RG ++K + R + + T+K F+ GD G+
Sbjct: 356 LYAQHCTMSSPDLDRGIRIKTNSIRGGHLKNLNYRNIDIGTVKDAVVVNFFYEEGDAGNF 415
Query: 369 PDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEK 423
P P + I ++ + ++ L G + P +G+ ++N+TIK K
Sbjct: 416 P---------PLLEDITIENLNVASANRAFVLRGYDHTPISGLTLNNITIKRALK 461
>gi|392950252|ref|ZP_10315809.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
gi|392434534|gb|EIW12501.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
Length = 438
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 152/323 (47%), Gaps = 33/323 (10%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L+ F GDGK +TK A++ +K L + PG +LTG+ + S+ L
Sbjct: 11 LSQFTPHGDGKNLDTKIIQQALNEANKQQTG----LTIGPGDYLTGALFVPSNSHLQFEA 66
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A L+ S D +++P + + G + R+ + I + VV G I+G G
Sbjct: 67 GARLIGSTDLADYP---EIDTRVAGVEM---RWPAAILNVIDGEDVVIEGPGVIDGNGPV 120
Query: 179 WWIKY--------RKK-----------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNV 219
WW +Y ++K + V RP + N IS+LTL+ S WN
Sbjct: 121 WWERYWGTDQKGGQRKIYDAKNLRWIVDYEVKRPREVLFYRCKNCAISDLTLMRSGFWNC 180
Query: 220 HPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGI 279
Y + + LT++ + P+TDGI+ DS + R+ + + GDDC+ VKSG D G+
Sbjct: 181 QLTYCQQMEVSHLTVKEN-NGPSTDGIDIDSSSYVRVHNCELSCGDDCIVVKSGRDGDGL 239
Query: 280 KVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG 339
+V P H+ I CI + LGSE+S GI DV D+ NT G R+K++ RG
Sbjct: 240 RVNQPAAHIEIDH--CIIHSGYGVTLGSEVSAGISDVHIHDMIFENTDCGFRMKSSADRG 297
Query: 340 AYVKEIYVRRMTMKTMKYVF-WM 361
+K + + M +++ F W+
Sbjct: 298 GVIKNVVAEHLEMHNVQFPFSWL 320
>gi|375109255|ref|ZP_09755504.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella jeotgali KCTC 22429]
gi|374570559|gb|EHR41693.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella jeotgali KCTC 22429]
Length = 481
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 196/427 (45%), Gaps = 68/427 (15%)
Query: 55 HSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTL 114
S +TDFG NT + ++ AA GG ++++P G++ TG+ +L S+ L
Sbjct: 65 RSFSITDFGAAAKAGFDNTA---AIAAAIAACAAAGGGRVLIPGGRFETGAIHLKSNVNL 121
Query: 115 YIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATING 174
++ D +L D + LP + + G + G +S LI+ ++ +T GN + G
Sbjct: 122 HLADDTVLSFYTDREHY--LPYVMTRWEGVELMG--YSPLIYAYQQENIALT-GNGILEG 176
Query: 175 QG--EPWW-------------------IKYRKKQF----------------NVTRPYLIE 197
G + WW +K R F N RP I+
Sbjct: 177 NGAVDAWWPWKGHWERRNWDYDASVDQVKTRSPLFEMAERGVPVSERVFNENFLRPPFIQ 236
Query: 198 VMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIE 257
V I +T+ +SP W ++PV S +V+++ + + PN+DG NP+SC IE
Sbjct: 237 PYGCKRVLIEGVTIRNSPFWLINPVLSEDVIVRNVNCISY--GPNSDGCNPESCNRVLIE 294
Query: 258 DNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVR 317
+ +GDDC+A+KSG + G ++ P Q+++I+ I + + +GSE+SGG +++
Sbjct: 295 NCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCI-MRAGHGGVVMGSEISGGARNIF 353
Query: 318 AE--DITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-----YVFWMTGDYGSHPD 370
A +++ N G+RIKT RG ++ +Y+R + + ++ F+ GD G+
Sbjct: 354 ARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVINFFYEEGDAGNF-- 411
Query: 371 PGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWN 430
+P V ++ ++ ++ +L G P +G+ + +V T L+
Sbjct: 412 -------MPQVKNLHISNLTVQKAQRAFELRGFERAPISGVTLHHVQFNNTAALGVLE-- 462
Query: 431 CTNIQGI 437
NI GI
Sbjct: 463 --NIAGI 467
>gi|336314135|ref|ZP_08569056.1| endopolygalacturonase [Rheinheimera sp. A13L]
gi|335881648|gb|EGM79526.1| endopolygalacturonase [Rheinheimera sp. A13L]
Length = 479
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 187/405 (46%), Gaps = 64/405 (15%)
Query: 58 VLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
V+T FG + + KA AI+ K GG +++VP G W TG +L S+ L++
Sbjct: 62 VITAFGAKQNQRCD--KAITEAIAACHKA---GGGRVVVPEGVWSTGPVHLKSNVNLHLQ 116
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG-GNATINGQG 176
K+A+L D + LP + + G + G FS LI+ ++ VTG G N G
Sbjct: 117 KNAVLSFVTDPQAY--LPEVFTRWEGVELMG--FSPLIYAYQQQNIAVTGEGILEGNASG 172
Query: 177 EPWW-----------------------------------IKYRKKQFNVTRPYLIEVMFS 201
E WW ++ R N RP I+
Sbjct: 173 ENWWPWKGVWKHTPWKLDPATDQKPGRDQLFAMAEAGVPVEKRYLDNNRLRPPFIQPYGC 232
Query: 202 DNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYI 261
+ V I +T+ +SP W ++PV +V+I+G+ + PN+DG +P+SC IE+
Sbjct: 233 ERVLIEGVTIRNSPFWLINPVLCKDVVIRGVNCVS--FGPNSDGCDPESCQRVLIENCLF 290
Query: 262 VSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAE-- 319
+GDDC+A+KSG + G ++ P Q ++I+ + + + +GSE+SGG K + A
Sbjct: 291 DTGDDCIALKSGRNAEGRRLATPIQQVVIQDCL-MKSGHGGVVIGSEISGGAKQIFARRC 349
Query: 320 DITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-----YVFWMTGDYGSHPDPGFD 374
+++ N + G+RIKT RG +++I V + + +K ++ GD G+
Sbjct: 350 RMSSPNLERGLRIKTNSVRGGLIEQIAVDDIEIGEVKDAIVINFYYEEGDAGNF------ 403
Query: 375 PKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
LP V + + ++ ++ G+ +GI +S+V+ +
Sbjct: 404 ---LPEVKDLKISNFRVKKAQRAFEIRGLPRAGISGIQMSDVSFE 445
>gi|299148436|ref|ZP_07041498.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513197|gb|EFI37084.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 518
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 185/419 (44%), Gaps = 70/419 (16%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAAD-GGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
+ DFG DG T NT+A N AI K D GG ++++P G WLTG L S+ L+
Sbjct: 54 ICDFGAKSDGVTLNTEAINNAI----KVVHDKGGGKVVIPEGLWLTGPIVLQSNVNLHAE 109
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG---------- 167
K+AL++ S D S +P++ + G D R S I N ++ +TG
Sbjct: 110 KNALIVFSSDTSLYPIIT---TSFEGLDAK--RCQSPISAMNAENIAITGYGVFDGAGDR 164
Query: 168 -------------------GNATINGQGEPWW------------IKYRKKQFNVT----- 191
++ G+ W+ K+ +T
Sbjct: 165 WRPVKKDKMTDRQWKNLVNSGGKVDENGKVWYPNEGALKASVLMAGSGDKRTEITSEEWE 224
Query: 192 ------RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
RP L+ ++ S + + +T +SPSW +HP+ ++ + + + P S N D
Sbjct: 225 DMKSWLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCESLTLNDVKVFNPWYSQNGDA 284
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
++ +SC N I + + +GDD + +KSG DE G + G P +++I+R + +
Sbjct: 285 LDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENIIVRNNTVLH-GHGGFVI 343
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKT------MKYVF 359
GSEMSGG+K+V + + I T G+R K+A GRG V+ IY+ + M + ++
Sbjct: 344 GSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADLY 403
Query: 360 WMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
+ S P P + P I D+ ++A L+G+ P I I N+ +
Sbjct: 404 YAAKSAPSEPVPSVSEET-PAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNMVV 461
>gi|359487180|ref|XP_002268806.2| PREDICTED: putative disease resistance RPP13-like protein 1-like
[Vitis vinifera]
Length = 1629
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/112 (60%), Positives = 88/112 (78%), Gaps = 4/112 (3%)
Query: 16 VIKILSTLLTLGLLS-PQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTK 74
V++++S +L LGLL +VAEC + ++E+ A+NC KHSAVLT+FGG GDGK K
Sbjct: 1498 VLEVVSGILVLGLLMIVRVAEC---GRASSVEYLAINCWKHSAVLTNFGGNGDGKKMKIK 1554
Query: 75 AFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQ 126
AF +AI +LS+ A+DGGA+ IVPPGKWLTGSFNLTSHFTLY+HKDA++L Q
Sbjct: 1555 AFKSAIDHLSECASDGGAEPIVPPGKWLTGSFNLTSHFTLYVHKDAVILGGQ 1606
>gi|336415491|ref|ZP_08595830.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
gi|335940370|gb|EGN02237.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
Length = 524
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 185/419 (44%), Gaps = 70/419 (16%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAAD-GGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
+ DFG DG T NT+A N AI K D GG ++++P G WLTG L S+ L+
Sbjct: 60 ICDFGAKSDGVTLNTEAINNAI----KVVHDKGGGKVVIPEGLWLTGPIVLQSNVNLHAE 115
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG---------- 167
K+AL++ S D S +P++ + G D R S I N ++ +TG
Sbjct: 116 KNALIVFSSDTSLYPIIT---TSFEGLDAK--RCQSPISAMNAENIAITGYGVFDGAGDR 170
Query: 168 -------------------GNATINGQGEPWW------------IKYRKKQFNVT----- 191
++ G+ W+ K+ +T
Sbjct: 171 WRPVKKDKMTDRQWKNLVNSGGKVDENGKVWYPNEGALKASVLMAGSGDKRTEITSEEWE 230
Query: 192 ------RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
RP L+ ++ S + + +T +SPSW +HP+ ++ + + + P S N D
Sbjct: 231 DMKSWLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCESLTLNDVKVFNPWYSQNGDA 290
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
++ +SC N I + + +GDD + +KSG DE G + G P +++I+R + +
Sbjct: 291 LDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENIIVRNNTVLH-GHGGFVI 349
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKT------MKYVF 359
GSEMSGG+K+V + + I T G+R K+A GRG V+ IY+ + M + ++
Sbjct: 350 GSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADLY 409
Query: 360 WMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
+ S P P + P I D+ ++A L+G+ P I I N+ +
Sbjct: 410 YAAKSAPSEPVPSVSEET-PAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNMVV 467
>gi|393787524|ref|ZP_10375656.1| hypothetical protein HMPREF1068_01936 [Bacteroides nordii
CL02T12C05]
gi|392658759|gb|EIY52389.1| hypothetical protein HMPREF1068_01936 [Bacteroides nordii
CL02T12C05]
Length = 467
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 169/339 (49%), Gaps = 51/339 (15%)
Query: 54 KHSAVLTDFGGVGDGKTSNT-KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
K + +TDFG D +T +A N AI K + GG ++VP G + TG L S+
Sbjct: 45 KQTYNITDFGAKPDNETEPCHEAINQAIL---KCSLAGGGTVVVPQGTFYTGPITLKSNV 101
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
++ + A+L ++S + P + + G D R LI+ T++ +TG TI
Sbjct: 102 NFHLQEGAILKFLTNQSLY--FPGVITRWEGLDCYNAR--PLIYAYGETNIAITG-KGTI 156
Query: 173 NGQG--EPWWI-----KYRKKQFNVT------------------------------RPYL 195
+GQG E WW KY K+ V RP L
Sbjct: 157 DGQGSNETWWPMCGAPKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRIMTPEDGLRPQL 216
Query: 196 IEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTR 255
I + V I ++TL++SP W +HP++ +++++G+ I PN DG +P+SC N
Sbjct: 217 INLYACSTVLIEDVTLLNSPFWVIHPLFCESLIVRGVNIFN--RGPNGDGCDPESCKNVL 274
Query: 256 IEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKD 315
IE+ +GDDC+A+KSG + G K +P++++I+R + + +GSE+SGG ++
Sbjct: 275 IENCTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCK-MKNGHGGVVIGSEISGGYRN 333
Query: 316 VRAED--ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ E+ + + N +RIKT+ RG ++ ++VR +T+
Sbjct: 334 LFVENCQMDSPNLDRVIRIKTSTCRGGIIENVFVRNITV 372
>gi|421725056|ref|ZP_16164257.1| glycoside hydrolase [Klebsiella oxytoca M5al]
gi|410374138|gb|EKP28818.1| glycoside hydrolase [Klebsiella oxytoca M5al]
Length = 460
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 183/409 (44%), Gaps = 63/409 (15%)
Query: 72 NTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEW 131
NT A AI + AA GG + VP G +LT L ++ L + KDA L+AS +E+ +
Sbjct: 53 NTDAIQKAIDDC---AAAGGGTVRVPKGNFLTNPLFLKNNIQLKLEKDATLVASTEEAAY 109
Query: 132 PLLPPLPSYGRGRDEPGGRFSSLIFG----TNLTDV--VVTGGNATINGQGEPWWIKYRK 185
RG D+ R++ G ++ D V G TI+GQG WW ++R+
Sbjct: 110 ----------RGDDKT--RYAEAENGWLPFISIADAQNVAIVGEGTIDGQGAVWWERWRE 157
Query: 186 ------KQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPID 239
K+ RP LI + + NV I +TL SPS++V Y+ +V I G I +P
Sbjct: 158 NIRATGKKGGTDRPRLIYITRASNVLIDGVTLTHSPSFHVVTRYAHDVDINGTRILSPWH 217
Query: 240 SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPD 299
+PNTD I+P N RI +NYI DD +A+K+ + G+ I +
Sbjct: 218 APNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPRFPDGVVDNIYIANNTL---KQ 274
Query: 300 SAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVF 359
I++GSE +GG+ +VR E+ T + G+RIK+ G+G VK I R M ++
Sbjct: 275 GRGISIGSESAGGVNNVRVENNTFEGSMYGIRIKSPRGKGGEVKNIVYRNTRMHNVEVPL 334
Query: 360 WMTGDYGSHP--------------------------DPG--FDPKALPTVTGINYRDMVA 391
+ Y + P DP FD P + I ++ +
Sbjct: 335 VFSAYYKAAPIVQAEVDKLLQAGGFTLGEQIYPPDSDPKQPFDKYKTPHFSNITVENLTS 394
Query: 392 DNVTQSAK-LDGIRNDPFTGICISNVTIK----LTEKPKELQWNCTNIQ 435
+++A + G P +G SNV I+ L + EL+ N+Q
Sbjct: 395 TGDSKAAAYIIGTPEAPLSGFHFSNVNIEADRGLRIRNAELESKGLNLQ 443
>gi|406597664|ref|YP_006748794.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii ATCC
27126]
gi|406374985|gb|AFS38240.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii ATCC
27126]
Length = 476
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 172/366 (46%), Gaps = 38/366 (10%)
Query: 83 LSKYAADGGAQLIVPPGKW-LTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYG 141
+ K +A GG ++VP G W + G L S L++ + A LL S D S + LP + +
Sbjct: 88 IDKASASGGGIVVVPKGTWQVDGPIRLKSKVNLHLEEGATLLFSGDPSHY--LPVVKTRW 145
Query: 142 RGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKY------------------ 183
G + +S LI+ N+ DV +TG TI+G + +I +
Sbjct: 146 EGTEV--FTYSPLIYALNVEDVAITG-KGTIDGNAQSAFIGWYEKQNTDMHALRKMGFDG 202
Query: 184 ---RKKQF---NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAP 237
K+QF + RP LI+ + V + + T ++SP W H VY+S+ ++ + + +
Sbjct: 203 VPVEKRQFGEGHYLRPPLIQFFHAKRVLLEDYTALNSPFWVNHLVYTSHATVRRVKVESH 262
Query: 238 IDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
+ N DG++ +S EDN+ +GDD + +KSG D G +G+P+ ++ R
Sbjct: 263 L--YNNDGLDIESSQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVARNNDLGG 320
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
D I LGSEMSGGIK V E+ S R K+ + RG V+ + +R + + K+
Sbjct: 321 ED--GIGLGSEMSGGIKRVFFENNVLHEGDSAYRFKSNLDRGGRVEMVRIRGSKVASFKH 378
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
+FW +Y S+ F T T I D+ +NV ++ P + ++
Sbjct: 379 LFWFQLNYPSNLHGNFP----ATYTDIIIEDLTVENVGTVLEIHAPDAAPVNNVKFKDIK 434
Query: 418 IKLTEK 423
IK E+
Sbjct: 435 IKEAEE 440
>gi|192362237|ref|YP_001980696.1| polygalacturonase pga28A [Cellvibrio japonicus Ueda107]
gi|190688402|gb|ACE86080.1| polygalacturonase, putative, pga28A [Cellvibrio japonicus Ueda107]
Length = 489
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 189/409 (46%), Gaps = 67/409 (16%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
+G G TKAF A ++ A GG +++V G +L+G +L S+ L++ K A
Sbjct: 77 YGARAGGAIDATKAFANA---IAACHAAGGGKVLVSGGTYLSGPIHLLSNVNLHVEKGAR 133
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE--PW 179
+ D + LP + + G + G +S LI+ ++ +TG T++GQ W
Sbjct: 134 IAFITDPKAY--LPAVFTRWEGMELMG--YSPLIYAYRQENIAITG-EGTLDGQANRTTW 188
Query: 180 W-----------------------------------IKYRKKQFNV---TRPYLIEVMFS 201
W + ++ F RP ++
Sbjct: 189 WPWKGGAWKGGKNWSVPGFPTQDEGREQLQRAMEAGVAPEQRLFAEGANLRPPFVQPYEC 248
Query: 202 DNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYI 261
+ V I +T+++SP W ++PV ++V+++G+T + PN+DG +P+SC IED Y
Sbjct: 249 ERVLIEGVTIVNSPFWLLNPVLCNDVIVRGVTCDSM--GPNSDGCDPESCDRVLIEDCYF 306
Query: 262 VSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAE-- 319
+GDDC+A+KSG + G ++ P+Q+++IR + + +GSEMSGG+++V E
Sbjct: 307 DTGDDCIAIKSGRNHDGRRINRPSQNIVIRNC-HMRRGHGGVVIGSEMSGGVRNVFVEHC 365
Query: 320 DITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVF-----WMTGDYGSHPDPGFD 374
++ + + + G+RIKT RG V+ + R +T+ +K + GD G H
Sbjct: 366 EMNSPDLERGLRIKTNSVRGGVVENFFARDITIVEVKNAIVIDFQYEEGDAGEH------ 419
Query: 375 PKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEK 423
P V I++R + + ++ G P + + + N K ++
Sbjct: 420 ---TPIVRNIDFRGITCAKAERVFQVRGYERSPISNLALRNCDFKQVKE 465
>gi|218129054|ref|ZP_03457858.1| hypothetical protein BACEGG_00628 [Bacteroides eggerthii DSM 20697]
gi|217988689|gb|EEC55008.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 492
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 173/378 (45%), Gaps = 39/378 (10%)
Query: 83 LSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGR 142
+ + ++ GG +I+P GKW++G L S L+I +DA ++ ++ LP + +
Sbjct: 49 IEQLSSQGGGTVIIPAGKWISGRIELKSFVELHIARDAEIVFGGCAEDY--LPAVFTRHE 106
Query: 143 GRDEPGGRFSSLIFGTNLTDVVVTG-----------------GNATINGQGEPWWIKYRK 185
G + G + I+ N ++ +TG A++ + PW + +
Sbjct: 107 GVEIMGP--GAFIYANNQENIAITGEGRILGPDMDAEIRKRPNGASVVEKDIPWDMPVEQ 164
Query: 186 KQFN------VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPID 239
+ ++ RP I + NV I +T+ S WNV P+Y NV+I+G+T+ + +
Sbjct: 165 RIYDGMDGRTFYRPKTISPINCRNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS-TE 223
Query: 240 SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPD 299
P+ DGI+ +SC N IE + GDDC +K+G + G++VG T++++IR +
Sbjct: 224 VPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRADDGLRVGKATENVVIRHSLA-QHG 282
Query: 300 SAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVF 359
I +GSE +G IK++ D T++G+R KT RG R+ M + F
Sbjct: 283 HGGITIGSETAGMIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSNHTIYERLRMINVGKAF 342
Query: 360 ---------WMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTG 410
+M +P+ D P ++ +D + ++ Q +GI PF+
Sbjct: 343 TWDLLGNAYYMGELAARYPERAVD-HLTPNISNTVIKDFIVESSKQFFTANGIPEIPFSN 401
Query: 411 ICISNVTIKLTEKPKELQ 428
I N TI + LQ
Sbjct: 402 TLIENGTIHCQQLISALQ 419
>gi|288924892|ref|ZP_06418828.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288338082|gb|EFC76432.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 470
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 164/338 (48%), Gaps = 55/338 (16%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L DFGG GDG T NT+AF A+S LSK GG L VP G +LTG + + L++ K
Sbjct: 51 LPDFGGKGDGVTMNTEAFGKAMSELSK---KGGGHLDVPAGVYLTGMISFKDNIDLHLDK 107
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+A+++ S D++++ + + PG I + ++ +TG I+G GE
Sbjct: 108 NAIIVLSPDKNDFIKIEN--GMKDDKATPG------INASKRKNISITG-EGIIDGNGE- 157
Query: 179 WWIKYRKKQ-------------------------FNVT---------------RPYLIEV 198
WW ++ + FN+T RP+L+
Sbjct: 158 WWRPVKRGKVSDTEWNRLKAMGGTVTPKGDLWYPFNLTHFSNVADTYETQERYRPHLVRF 217
Query: 199 MFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIED 258
+NV + +TL++SP +++ P +NV+I G+T++ P ++ N D I+ SC I +
Sbjct: 218 TDCENVLVKGVTLLNSPKFHIIPTRCTNVVIDGITVKCPWNAQNGDAIDISSCRQVLIVN 277
Query: 259 NYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRA 318
N I +GDD + +K+G G++ G P +++I + +GSE SGG+K++
Sbjct: 278 NVIDAGDDGICMKAGAGAKGVEYG-PVANVLIENNTVYNA-HGGFVIGSEFSGGMKNIVV 335
Query: 319 EDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK 356
T +G+R K+AV RG + I++ + M +K
Sbjct: 336 RRNKFCGTDTGLRFKSAVKRGGKTENIFISDIYMTDIK 373
>gi|407688605|ref|YP_006803778.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291985|gb|AFT96297.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 476
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 172/366 (46%), Gaps = 38/366 (10%)
Query: 83 LSKYAADGGAQLIVPPGKW-LTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYG 141
+ K +A GG ++VP G W + G L S L++ + A LL S D S + LP + +
Sbjct: 88 IDKASASGGGIVVVPKGTWQVDGPIRLKSKVNLHLEEGATLLFSGDPSHY--LPVVKTRW 145
Query: 142 RGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKY------------------ 183
G + +S LI+ N+ DV +TG TI+G + +I +
Sbjct: 146 EGTEV--FTYSPLIYALNVEDVAITG-KGTIDGNAQSAFIGWYEKQNTDMHALRKMGFDG 202
Query: 184 ---RKKQF---NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAP 237
K+QF + RP LI+ + V + + T ++SP W H VY+S+ ++ + + +
Sbjct: 203 VPVEKRQFGEGHYLRPPLIQFFHAKRVLLEDYTALNSPFWVNHLVYTSHATVRRVKVESH 262
Query: 238 IDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
+ N DG++ +S EDN+ +GDD + +KSG D G +G+P+ ++ R
Sbjct: 263 L--YNNDGLDIESSQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVARNNDLGG 320
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357
D I LGSEMSGGIK V E+ S R K+ + RG V+ + +R + + K+
Sbjct: 321 ED--GIGLGSEMSGGIKRVFFENNVLHEGDSAYRFKSNLDRGGRVEMVRIRGSKVASFKH 378
Query: 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
+FW +Y S+ F T T I D+ +NV ++ P + ++
Sbjct: 379 LFWFQLNYPSNLHGNFP----ATYTDIIIEDLTVENVGTVLEIHAPDAAPVHNVKFKDIK 434
Query: 418 IKLTEK 423
IK E+
Sbjct: 435 IKEAEE 440
>gi|300715765|ref|YP_003740568.1| Pectin lyase fold domain protein, virulence factor [Erwinia
billingiae Eb661]
gi|299061601|emb|CAX58716.1| Pectin lyase fold domain protein, virulence factor [Erwinia
billingiae Eb661]
Length = 791
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 173/390 (44%), Gaps = 48/390 (12%)
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDA 120
DFGG DGKT NT A AI S+ GG + + PG+WL+G L S+ TL I + A
Sbjct: 379 DFGGKADGKTLNTTAIQQAIDQCSQR---GGGTVQLSPGRWLSGPLQLQSNITLQIDQGA 435
Query: 121 LLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW 180
L AS E ++ P + I+ +N+ +V +TGG + WW
Sbjct: 436 TLQASNQEGKF--------VNAFIGHPARVNEAFIYASNVNNVAITGGGTLDGDGEKSWW 487
Query: 181 IKYRKKQFNVT---------------------RPYLIEVMFSDNVQISNLTLIDSPSWNV 219
+ K + V RP+ IE + +I L L +SP WN+
Sbjct: 488 PQALKIRAEVRGGNPKAFTDRFPGIPLANGAPRPWFIEFNNVSHSKIEQLHLTNSPMWNI 547
Query: 220 HPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGI 279
S+++ +Q + I P+ SPNTDG++ S N + + I +GDD +A+KS G+
Sbjct: 548 VIRNSADITVQNVRITNPVSSPNTDGMDIVSSRNITVSNMDIHTGDDNIAIKS-----GL 602
Query: 280 KVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG 339
G I + D I++GSE + GI V +T +NT++GVRIK+A RG
Sbjct: 603 VNGTAAASKDITIEDSVMRDGHGISVGSETANGIGKVTINHVTFLNTENGVRIKSARDRG 662
Query: 340 AYVKEIYVRRMTMKTMKYVFWMTGDY----GSHPDPGFDP-------KALPTVTGINYRD 388
+ + +TM + +T Y G+ P + P + GI+ D
Sbjct: 663 ENIGPLIASHLTMTNVVTPVLVTNSYSGQAGAQGHTLTQPIETAAVTASTPKMKGIHISD 722
Query: 389 MVADNVTQSAKLDGIRNDPFTGICISNVTI 418
++A + + G+ P + ++N+ I
Sbjct: 723 LMATKASYAMIFSGLPESPVEDVTLNNIRI 752
>gi|315607918|ref|ZP_07882911.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae ATCC 33574]
gi|315250387|gb|EFU30383.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae ATCC 33574]
Length = 470
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 164/338 (48%), Gaps = 55/338 (16%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L DFGG GDG T NT+AF A+S LSK GG L VP G +LTG + + L++ K
Sbjct: 51 LPDFGGKGDGVTMNTEAFGKAMSELSK---KGGGHLDVPAGVYLTGMISFKDNIDLHLDK 107
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+A+++ S D++++ + + PG I + ++ +TG I+G GE
Sbjct: 108 NAIIVLSPDKNDFIKIEN--GMKDDKATPG------INASKRKNISITG-EGIIDGNGE- 157
Query: 179 WWIKYRKKQ-------------------------FNVT---------------RPYLIEV 198
WW ++ + FN+T RP+L+
Sbjct: 158 WWRPVKRGKVSDTEWNRLKAMGGTVTPKGDLWYPFNLTHFSNVADTYETQERYRPHLVRF 217
Query: 199 MFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIED 258
+NV + +TL++SP +++ P +NV+I G+T++ P ++ N D I+ SC I +
Sbjct: 218 TDCENVLVKGVTLLNSPKFHIIPTRCTNVVIDGITVKCPWNAQNGDAIDISSCRQVLIIN 277
Query: 259 NYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRA 318
N I +GDD + +K+G G++ G P +++I + +GSE SGG+K++
Sbjct: 278 NVIDAGDDGICMKAGAGAKGVEYG-PVANVLIENNTVYNA-HGGFVIGSEFSGGMKNIVV 335
Query: 319 EDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK 356
T +G+R K+AV RG + I++ + M +K
Sbjct: 336 RRNKFCGTDTGLRFKSAVKRGGKTENIFISDIYMTDIK 373
>gi|402308351|ref|ZP_10827360.1| pectate lyase family protein [Prevotella sp. MSX73]
gi|400375795|gb|EJP28690.1| pectate lyase family protein [Prevotella sp. MSX73]
Length = 470
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 164/338 (48%), Gaps = 55/338 (16%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L DFGG GDG T NT+AF A+S LSK GG L VP G +LTG + + L++ K
Sbjct: 51 LPDFGGKGDGVTMNTEAFGKAMSELSK---KGGGHLDVPAGVYLTGMISFKDNIDLHLDK 107
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+A+++ S D++++ + + PG I + ++ +TG I+G GE
Sbjct: 108 NAIIVLSPDKNDFIKIEN--GMKDDKATPG------INASKRKNISITG-EGIIDGNGE- 157
Query: 179 WWIKYRKKQ-------------------------FNVT---------------RPYLIEV 198
WW ++ + FN+T RP+L+
Sbjct: 158 WWRPVKRGKVSDTEWNRLKAMGGTVTPKGDLWYPFNLTHFSNVADTYETQERYRPHLVRF 217
Query: 199 MFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIED 258
+NV + +TL++SP +++ P +NV+I G+T++ P ++ N D I+ SC I +
Sbjct: 218 TDCENVLVKGVTLLNSPKFHIIPTRCTNVVIDGITVKCPWNAQNGDAIDISSCRQVLIVN 277
Query: 259 NYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRA 318
N I +GDD + +K+G G++ G P +++I + +GSE SGG+K++
Sbjct: 278 NVIDAGDDGICMKAGAGAKGVEYG-PVANVLIENNTVYNA-HGGFVIGSEFSGGMKNIVV 335
Query: 319 EDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK 356
T +G+R K+AV RG + I++ + M +K
Sbjct: 336 RRNKFCGTDTGLRFKSAVKRGGKTENIFISDIYMTDIK 373
>gi|238794982|ref|ZP_04638578.1| Endopolygalacturonase [Yersinia intermedia ATCC 29909]
gi|238725685|gb|EEQ17243.1| Endopolygalacturonase [Yersinia intermedia ATCC 29909]
Length = 442
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 150/317 (47%), Gaps = 33/317 (10%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
FG G+ T A AI A G ++VPPG++LTG+ L +H + A+
Sbjct: 21 FGADASGQQLATAAIQHAID-----IAAPGDTVVVPPGRYLTGALFLKNHLIFELQTGAV 75
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWI 181
LL S++ ++PL + G P G + L DV V G + TI+GQG WW
Sbjct: 76 LLGSRELEDYPLRQTRVA-GIDMVWPTGIINIL----QCHDVCVCG-SGTIDGQGAVWWH 129
Query: 182 K-------------YRKK------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPV 222
K Y ++ ++ RP + V S+ V++S T +S WN+H
Sbjct: 130 KFWGTDENGGMLADYSQRGLRWVVDYDCQRPRNLVVYRSEQVEMSGFTSRESGFWNIHLC 189
Query: 223 YSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVG 282
YS ++ + L + P+TDGI+ DS R+E + DD + VK+G ++G
Sbjct: 190 YSQHLYLHHLQVENS-GGPSTDGIDIDSSQQVRVEHCRVSCNDDNICVKAGRGAEAERIG 248
Query: 283 MPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYV 342
+ ++IR C + I LGSE SGGI+ V E+IT T G RIK+A RG ++
Sbjct: 249 ATARDIVIRE--CELLHGSGITLGSETSGGIEQVLIENITFSGTGVGFRIKSARNRGGFI 306
Query: 343 KEIYVRRMTMKTMKYVF 359
+ + V + M + Y F
Sbjct: 307 RHVRVSGLQMTDVHYPF 323
>gi|407688164|ref|YP_006803337.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291544|gb|AFT95856.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 488
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 195/415 (46%), Gaps = 67/415 (16%)
Query: 54 KHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWL-TGSFNLTSHF 112
K A +TDF + + + +A + AI +++ GG +++VP G WL +G +L S+
Sbjct: 69 KREANVTDF--LNENGSDFKQALHAAIDQVAR---QGGGKVVVPKGDWLCSGPIHLQSNI 123
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
L I A + S + ++ P + + G + G +S LI+ +++ +T G T+
Sbjct: 124 NLRIEAGATIRFSTNPEDYK--PYVFTRWEGMELMG--YSPLIYAFEQSNIAIT-GKGTL 178
Query: 173 NGQG--EPWW-----------------------------------IKYRKKQFNVTRPYL 195
+G + WW + R + N RP
Sbjct: 179 DGSAAKDNWWPWKGKWKASTWGDDPVENQKYTRDTLQEMVENGTPVSDRVFENNYLRPPF 238
Query: 196 IEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTR 255
I+ +NV I +T++ SP W V+PV NV + + ++ PN+DG +P+SCTN
Sbjct: 239 IQPYRCENVLIEGVTILRSPFWLVNPVLCKNVTVNDVYCKS--FGPNSDGCDPESCTNVL 296
Query: 256 IEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKD 315
I + +GDDC+A+KSG + G +V +P +++I + + +GSE+SGG+++
Sbjct: 297 ISNCTFDTGDDCIAIKSGRNADGRRVNVPCSNIVIEHCE-MKAGHGGVVIGSEISGGVEN 355
Query: 316 VRAEDIT--AINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-----YVFWMTGDYGSH 368
+ A+ T + + G+RIKT RG ++K + R + + T+K F+ GD G
Sbjct: 356 LYAQHCTMSSPDLDRGIRIKTNSIRGGHLKNLNYRNIDIGTVKDAVVVNFFYEEGDAGKF 415
Query: 369 PDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEK 423
P P + I ++ + ++ L G + P +G+ ++N+TIK K
Sbjct: 416 P---------PLLEDITIENLNVASANRAFVLRGYDHTPISGLTLNNITIKRALK 461
>gi|332666314|ref|YP_004449102.1| polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
gi|332335128|gb|AEE52229.1| Polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
Length = 778
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 206/479 (43%), Gaps = 85/479 (17%)
Query: 15 HVIKILSTLLTLGLL---SPQVAECRPTKNSYTIEFQ-----ALNCRKHSAVLTDFGGVG 66
H I+++L+ G+ +P + +P++ + +EF+ A RK + + +G
Sbjct: 220 HGASIMASLVAEGIRDIGNPLLGLLKPSRFTDKLEFELPKIAAPFFRKDTFSIVRYGAKS 279
Query: 67 DGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQ 126
DG T +T A N A+ NL+ A ++VP G WLTG L S+ L+I + ALL S
Sbjct: 280 DGITLSTPAINQAV-NLAHEAGG--GVVVVPSGFWLTGPIVLKSNVNLHISQGALLQFSN 336
Query: 127 DESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPW------- 179
++PL+ + G D R + I +++ +TG I+G G+ W
Sbjct: 337 KREDFPLVK---TTWEGEDAI--RCQAPISAVEASNIAITG-TGIIDGAGQVWRQVKKDK 390
Query: 180 ----------------------W------IKYRKKQ--------FNVT---------RPY 194
W +K K Q FN+ RP
Sbjct: 391 LTEAQWKKLIASGGVLDEEKRTWYPSENALKGSKIQKPGSIAAGFNLNNCSEFKDFLRPN 450
Query: 195 LIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNT 254
++ + V + +T +SP+W +HP+ ++ ++ + +R P N D ++ +SC N
Sbjct: 451 MVSLSRCTQVLLEGITFQNSPAWTIHPLLCEHITLRDVIVRNPWYGQNNDALDLESCRNG 510
Query: 255 RIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIK 314
+E +GDD + +KSG D G K G+PT+++I+R +GSEMSGG++
Sbjct: 511 LVEGCSFDTGDDGICIKSGRDAEGRKRGVPTENIIVRNCTVFH-GHGGFVIGSEMSGGVR 569
Query: 315 DVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKT---------MKYV----FWM 361
++ D + T G+R KTA GRG V+ IYV + M M Y+ +
Sbjct: 570 NLFVSDCNFLGTDVGLRFKTARGRGGIVENIYVTDINMTNIPGEAILFDMYYMAKDPVSL 629
Query: 362 TGDYGSHPDPGFDP--KALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
G+ P+ +P + P + +++V + G+ P I I N I
Sbjct: 630 NGEKNVLPEMKAEPLGEGTPQFRNFHIKNIVCQGAETGILIRGLPEMPIKNISIENANI 688
>gi|372276037|ref|ZP_09512073.1| polygalacturonase [Pantoea sp. SL1_M5]
Length = 430
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 180/383 (46%), Gaps = 41/383 (10%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DF V D + +T+A AI + ++ G +++P G++LTG+ L S TL + K
Sbjct: 6 IIDFDAVPDATSLSTQAIQRAIDSAAE-----GDTVLIPAGRFLTGALFLKSKMTLELAK 60
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
DA+LL SQ ++P + + G D + + + N V G+ T++GQG
Sbjct: 61 DAVLLGSQQLEDYP---EIATRVAGIDMV---WPTAMLNINQCRNVTVCGSGTLDGQGAV 114
Query: 179 WWIK-------------YRKK------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNV 219
WW K Y ++ ++ RP + V S+ V + + T DS WN+
Sbjct: 115 WWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNLVVYQSECVTLQDFTSKDSGFWNL 174
Query: 220 HPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGI 279
H YS V +Q L + + +TDGI+ DS R+E + DD + VKSG
Sbjct: 175 HVCYSKQVNLQRLNVMNATGT-STDGIDIDSSQLVRVEGCTVSCNDDNICVKSGRGAEAQ 233
Query: 280 KVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG 339
++ + +IIR C + I LGSE SGGI++V E T G RIK+A RG
Sbjct: 234 QLARTARDIIIRD--CTLLKGSGITLGSETSGGIENVIIEHNRFSGTGVGFRIKSARNRG 291
Query: 340 AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAK 399
++K I VR + M+ + Y F + ++ P + + T +R + A VT A
Sbjct: 292 GWIKNIIVRHLIMEDVGYPFMLQLNW--FPQYSYSEQPADTEQPSYWRKLAA-GVTGDAG 348
Query: 400 LDGIRNDPFTGICISNVTIKLTE 422
L + N I IS+++ LT+
Sbjct: 349 LTRVEN-----IRISHISSSLTQ 366
>gi|239628551|ref|ZP_04671582.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518697|gb|EEQ58563.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 710
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 190/406 (46%), Gaps = 62/406 (15%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIH- 117
+TD+G V D +TKA AI ++S A GG +++P G++ TG+ L + L++
Sbjct: 39 VTDYGAVPDDGILDTKAIQAAIDHVS---AQGGGMVVIPRGRFDTGAIVLKENVNLHLES 95
Query: 118 KDALLLASQD--ESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQ 175
+D +L ++D +PL+ L Y P +S LI+ ++ VT G ++GQ
Sbjct: 96 EDTVLCFTRDIIPENYPLV--LAYY---EGAPCYNWSPLIYANGQDNIAVT-GKGRLDGQ 149
Query: 176 GEP--WWIKY------------------------------RKKQF---NVTRPYLIEVMF 200
+ WW Y RK+ F + RP I+V+
Sbjct: 150 ADQDTWWSWYGDTYIGQDYTRPSSSDVGILRRMVDDGVDVRKRVFGEGHFLRPNFIQVIG 209
Query: 201 SDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNY 260
+NV + +++ + P W V+PV +NV ++G+ + + N DG NP++C IED
Sbjct: 210 CENVLVEGISIKNPPMWGVNPVLCTNVTVRGIEVDGNFN--NNDGCNPENCNYVLIEDCR 267
Query: 261 IVSGDDCVAVKSGWDEYGIKV---GMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVR 317
G D VAVKSG + G ++ G ++++IR + ++ IA GSEMSG I+D+
Sbjct: 268 FQVGGDGVAVKSGRNRDGWELKEAGWSARNMVIRGNE-FAGGTSGIAFGSEMSGDIRDIY 326
Query: 318 AEDITAINTQS---GVRIKTAVGRGAYVKEIYVRRMTMKTMKYV-FWMTGDYGSHPDPGF 373
A+D TQS +R K+ RG V+ IY+R ++YV T Y D G+
Sbjct: 327 ADD-NRFGTQSLDYAIRFKSNAARGGVVERIYIRGSRASNIRYVSIHATMLY----DEGW 381
Query: 374 DPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
LP I D A+ T ++ P TG+ + +V I+
Sbjct: 382 MGSYLPEYRDIRIEDFTANGGTYGIFMEAFDQVPITGLELVDVDIR 427
>gi|388256014|ref|ZP_10133195.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
gi|387939714|gb|EIK46264.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
Length = 505
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 184/403 (45%), Gaps = 57/403 (14%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG DGK +NT+AF AI +L+G +L S+ L++ +
Sbjct: 90 VRDFGAKADGKHNNTQAFAAAIKACHDAGGGKVVVAGG---DYLSGPIHLLSNINLHVAE 146
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE- 177
A +L D S + LP + + G + G +S LI+ T++ +TG ++GQ
Sbjct: 147 GARILFITDPSAY--LPAVFTRWEGMELMG--YSPLIYAYGQTNIAITG-KGVLDGQANR 201
Query: 178 -PWW-----------------------------------IKYRKKQFN---VTRPYLIEV 198
WW + ++ + RP I+
Sbjct: 202 TTWWPWKGGAWKGGTDWSMPGVPTQDAARDKLMQDMENGVPVAERMYADGAYLRPPFIQP 261
Query: 199 MFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIED 258
NV I +T+ ++P W ++PV NV + G+ + PN+DG +P+SC N I++
Sbjct: 262 YACKNVLIEGVTITNAPFWLLNPVLCENVTVDGVNCIS--HGPNSDGCDPESCKNVVIKN 319
Query: 259 NYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRA 318
+GDDC+A+KSG + G ++ PT++++I + + +GSE+SGG+++V
Sbjct: 320 CLFDTGDDCIAIKSGRNADGRRLNTPTENIVISHCK-MREGHGGVVIGSEISGGVRNVFV 378
Query: 319 E--DITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPK 376
E ++++ N G+RIKT RG ++ ++R +T+ + + DY + G K
Sbjct: 379 EHCEMSSPNLDRGIRIKTNSVRGGVIENFFIRDITIGEVTTAIVIDFDY----EEGDAGK 434
Query: 377 ALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
PTV I+ R++ +N ++ G + P + ++N K
Sbjct: 435 FTPTVRNIDIRNLHCENAKHVFQVRGYKRSPIQNLHLTNCHFK 477
>gi|265755004|ref|ZP_06089918.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263234615|gb|EEZ20194.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 497
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 196/439 (44%), Gaps = 54/439 (12%)
Query: 73 TKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWP 132
T N I+ +SK GG +++P GKW + L S+ L++ K A + S ++
Sbjct: 42 TDLVNRTIAEVSK---QGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAEDY- 97
Query: 133 LLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG-----------------GNATINGQ 175
LP + + G + G ++ I+ ++ +TG A++ +
Sbjct: 98 -LPAVFTRHEGVEIMGP--AAFIYANGENNIAITGEGTIYGPSMDAEIRKRPNGASVVEK 154
Query: 176 GEPWWIKYRKKQFN------VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
PW + ++ ++ RP I + NV I +T+ S WNV P+Y NV+I
Sbjct: 155 DVPWDMPIEQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVII 214
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
+G+T+ + P+ DGI+ +SC N IE + GDDC +K+G E G++VG PT+++I
Sbjct: 215 RGITVNS-TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVI 273
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRR 349
IR + I GSE +G IK++ D T++G+R KT RG Y R
Sbjct: 274 IRYSLA-QHGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYER 332
Query: 350 MTMKTMKYVF--------WMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLD 401
+ M + F + G+ + + P V I +D + ++ Q +
Sbjct: 333 LRMINVGKAFTWDLLGSAYYMGELAARYPARKVNRLTPNVKNILIKDFIVESADQFFTAN 392
Query: 402 GIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSR-VTPQAC----ELLPKKEPTD 456
GI PF + I N IK K+L + G T R +T ++ +L K D
Sbjct: 393 GIPEIPFNQVVIENGEIKC----KKLIGALNDAAGFTMRKLTIESLHNDIHILDGK---D 445
Query: 457 CFFPDD--KLPIDDVRLNT 473
F D KLP +++R+N
Sbjct: 446 ILFEDIHFKLPSEEIRVNV 464
>gi|452958539|gb|EME63892.1| endopolygalacturonase [Amycolatopsis decaplanina DSM 44594]
Length = 453
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 187/405 (46%), Gaps = 40/405 (9%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG GDGKT NT A AI + A GG ++VP G ++TG+ L S L++
Sbjct: 59 ILDFGARGDGKTDNTAAIRKAIETAN---ARGGGHVVVPRGTFVTGAVYLKSDVDLHLAA 115
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A+L D S++P + R S +I+ +++ VTG T++ G
Sbjct: 116 GAVLAFDSDASKFPNV-----LTRYEGIECVNRSPMIYAYKESNIAVTG-QGTLDAAGTA 169
Query: 179 WWIKYRKKQF--------------------NVTRPYLIEVMFSDNVQISNLTLIDSPSWN 218
W K + +++ + R +E D V I +TL + W
Sbjct: 170 SWNKGKDREYLESLVAKGIPPERRIVPGSGHTMRSTFVEPYSCDTVLIQGITLKNPMFWQ 229
Query: 219 VHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYG 278
+HP NV I G+ A NTD +P+SC + I ++++ + DD +A+KSG D G
Sbjct: 230 LHPTLCRNVTIDGVRTDASTAHSNTDACDPESCDHVVIVNSHLGAHDDNIALKSGRDADG 289
Query: 279 IKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAI-NTQSGVRIKTAVG 337
+VG+P +++++ + + + AI GSE +GGI+DV A +T T+ G+ +K+
Sbjct: 290 RRVGVPCRNIVVANCV-MDGNWGAITCGSEQTGGIRDVYAYKLTVTGETKYGLYVKSNTL 348
Query: 338 RGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPD---PGFDPKALPTVTGINYRDMVAD-N 393
RG + + + + ++ + V ++ DY P F P L TG D
Sbjct: 349 RGGFTENVNLDSVSGTFGRSVVYVLPDYNGQTGEYVPRFGPFTLGNSTGTRCGQAAFDVR 408
Query: 394 VTQSAKLDG--IRNDPFTGICISNVTIKLTEKPKELQWNCTNIQG 436
++ + G +R+ F G+ + T+K + +L++ T I G
Sbjct: 409 GLPNSHVRGLRVRDCRFDGVASTENTLKHID---DLRFENTTING 450
>gi|237709329|ref|ZP_04539810.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229456714|gb|EEO62435.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 529
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 196/439 (44%), Gaps = 54/439 (12%)
Query: 73 TKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWP 132
T N I+ +SK GG +++P GKW + L S+ L++ K A + S ++
Sbjct: 74 TDLVNRTIAEVSK---QGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAEDY- 129
Query: 133 LLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG-----------------GNATINGQ 175
LP + + G + G ++ I+ ++ +TG A++ +
Sbjct: 130 -LPAVFTRHEGVEIMGP--AAFIYANGENNIAITGEGTIYGPSMDAEIRKRPNGASVVEK 186
Query: 176 GEPWWIKYRKKQFN------VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
PW + ++ ++ RP I + NV I +T+ S WNV P+Y NV+I
Sbjct: 187 DVPWDMPIEQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVII 246
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
+G+T+ + P+ DGI+ +SC N IE + GDDC +K+G E G++VG PT+++I
Sbjct: 247 RGITVNS-TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVI 305
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRR 349
IR + I GSE +G IK++ D T++G+R KT RG Y R
Sbjct: 306 IRYSLA-QHGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYER 364
Query: 350 MTMKTMKYVF--------WMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLD 401
+ M + F + G+ + + P V I +D + ++ Q +
Sbjct: 365 LRMINVGKAFTWDLLGSAYYMGELAARYPARKVNRLTPNVKNILIKDFIVESADQFFTAN 424
Query: 402 GIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSR-VTPQAC----ELLPKKEPTD 456
GI PF + I N IK K+L + G T R +T ++ +L K D
Sbjct: 425 GIPEIPFNQVVIENGEIKC----KKLIGALNDAAGFTMRKLTIESLHNDIHILDGK---D 477
Query: 457 CFFPDD--KLPIDDVRLNT 473
F D KLP +++R+N
Sbjct: 478 ILFEDIHFKLPSEEIRVNV 496
>gi|116619804|ref|YP_821960.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222966|gb|ABJ81675.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 535
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 182/411 (44%), Gaps = 67/411 (16%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ D+G DG T AF AI A GG + VPPG++ +G L S+ TL I
Sbjct: 33 IADYGAKKDGSAPATDAFRQAIQAAK---AAGGGTIYVPPGRYTSGPIELFSNMTLDIDA 89
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSS--LIFGTNLTDVVVTGGNATINGQG 176
A + E+P+ LP + RGR + LI GT + +V VTG G
Sbjct: 90 GARV-------EFPV-AELP-FTRGRYLGVETLTPMPLIGGTGVENVTVTGRGILTTGDY 140
Query: 177 EPWWIKY-------------------------------------------RKKQFNVT-- 191
E W Y ++++ +
Sbjct: 141 EAWRKAYPAAYQEYLKLHNGVISTGGSEAFSANGPRWDHLLKVLETGHRASEEEYRLAAA 200
Query: 192 --RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPD 249
RP I M + NV + ++ +I +P + VH +Y+ N ++ + I+ P+ + I D
Sbjct: 201 ELRPSFICFMNAKNVLVEDVRIIGAPMFVVHLLYTENATVRNVMIQT-YPGPHANAIVAD 259
Query: 250 SCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEM 309
S I D+YI +GDD + +KSG D GI+V PT+H+ I + A+ +GSE
Sbjct: 260 SSRFVHISDSYIDTGDDGIVLKSGKDADGIRVNRPTEHVTITNC-TVHHAHGAVVIGSET 318
Query: 310 SGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDY--GS 367
+G I+DV A +ITAI+T++G+RIK+ GRG V ++ TM+ + +T Y G
Sbjct: 319 AGSIRDVVASNITAIDTENGIRIKSRRGRGGTVDDLRFDNWTMENVGTGIVVTSYYVMGG 378
Query: 368 HPDPGFDP--KALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNV 416
D +P + P I ++ + +DG+ P TG+ +++V
Sbjct: 379 ESDTKEEPVSERTPKFRNIGISNVTIHGAKKVVDIDGLPEMPITGLRLTDV 429
>gi|196228364|ref|ZP_03127231.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
gi|196227767|gb|EDY22270.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
Length = 456
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 184/390 (47%), Gaps = 51/390 (13%)
Query: 20 LSTL-LTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVL--TDFGGVGDGKTSNTKAF 76
LST+ L LG ++ CR + T E QA+ + S DF G + N +
Sbjct: 5 LSTIPLLLGAIAIAACSCRAAEIE-TSESQAILAQIRSPEFPARDFSITDFGASPNADST 63
Query: 77 NTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPP 136
++ A GG ++ +P G WLTG+ +L + L++ K+A L + +++ LP
Sbjct: 64 EAIAKAITACHAAGGGRVTIPAGVWLTGAVHLLGNVDLHLAKEATLRFVPEPAKY--LPV 121
Query: 137 LPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG--EPWWI------------K 182
+ + G + +S L++ +V +TG T++G + WW
Sbjct: 122 VLTRYEGIE--CMNYSPLVYAFEQENVAITGA-GTLDGSASSQNWWAWNERAPDKPALQA 178
Query: 183 YRKKQFN------------------VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYS 224
+KQ + RP IE NV I +T+++SP W +HP
Sbjct: 179 ADRKQLDQQGADGTPVAQRIFGAGHFLRPSFIEPYRCKNVLIEGVTIVNSPMWEIHPTLC 238
Query: 225 SNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMP 284
+NV ++G+T+ + N DG +P+SC + IED +GDDC+A+KSG + G +VG+
Sbjct: 239 TNVTVRGVTVHSL--GTNNDGCDPESCHDVLIEDCTFQTGDDCIAIKSGRNNDGRRVGVA 296
Query: 285 TQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRAED--ITAINTQSGVRIKTAVGRGAY 341
+++IIRR C D + +GSE+SGG+++V D + + R K+ RG
Sbjct: 297 AENIIIRR--CTMKDGHGGVTIGSEVSGGVRNVFVSDCQMDSPRLDRAFRFKSNAVRGGE 354
Query: 342 VKEIYVRRMTM-KTMKYVFWMTGDY--GSH 368
++ I V ++ + + + V + DY G+H
Sbjct: 355 IENIQVSQVKIGRVARAVLSVEFDYEEGAH 384
>gi|293370401|ref|ZP_06616955.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292634549|gb|EFF53084.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 525
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 184/418 (44%), Gaps = 68/418 (16%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG +G T NT+A N AI + GG ++++P G WLTG L S+ L+ K
Sbjct: 61 ICDFGAKSNGVTLNTEAINNAIKAVHD---KGGGKVVIPEGLWLTGPIVLQSNVNLHAEK 117
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG----------- 167
+AL++ S D S +P++ + G D R S I N ++ +TG
Sbjct: 118 NALIVFSSDTSLYPIIT---TSFEGLDVK--RCQSPISAMNAENIAITGYGVFDGAGDRW 172
Query: 168 ------------------GNATINGQGEPWW------------IKYRKKQFNVT------ 191
++ G+ W+ K+ +T
Sbjct: 173 RPVKKDKMTDRQWKNLVNSGGKVDENGKVWYPNEGALKASVLMAGSEDKRTEITSEEWED 232
Query: 192 -----RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGI 246
RP L+ ++ S + + +T +SPSW +HP+ ++++ + + P S N D +
Sbjct: 233 MKSWLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGDAL 292
Query: 247 NPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALG 306
+ +SC N I + + +GDD + +KSG DE G + G P +++I+R + +G
Sbjct: 293 DVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLH-GHGGFVIG 351
Query: 307 SEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKT------MKYVFW 360
SEMSGG+K+V + + I T G+R K+A GRG V+ IY+ + M + +++
Sbjct: 352 SEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADLYY 411
Query: 361 MTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
P P + P I D+ ++A L+G+ P I I N+ +
Sbjct: 412 AVKSAPGEPVPSVSEET-PAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNMVV 468
>gi|399029277|ref|ZP_10730250.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398072887|gb|EJL64081.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 563
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/439 (24%), Positives = 186/439 (42%), Gaps = 77/439 (17%)
Query: 46 EFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGS 105
E Q +K + + DFG V + TKA N AI K + GG + +P G W TG
Sbjct: 48 EVQIPKFKKDTLNIVDFGAVPNTGELCTKAINDAIM---KCSESGGGVVAIPSGLWTTGP 104
Query: 106 FNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVV 165
L S+ L+ A +L + D +++ L+ SY G R S I G L ++ +
Sbjct: 105 IYLKSNVNLHTQNGAYILFTSDLNQYKLIN---SYFEGNKVI--RCESPIMGVGLENIAI 159
Query: 166 TGGNATINGQGEPW-----------------------------W---------------- 180
TG +G G W W
Sbjct: 160 TG-KGIFDGNGSKWRPVKIGKMSDEQWKNMVNSGGILSKDRKTWYPSEEALIGNEQKDKL 218
Query: 181 -----IKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIR 235
I+ K RP ++ ++ + + +T +SP+WNV+P+ NV + L IR
Sbjct: 219 PKVPSIENMKPYKQALRPVMVSLVNCKKLLLDGVTFQNSPAWNVNPLMCENVTLSNLNIR 278
Query: 236 APIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLIC 295
P S N DG++ +SC + + GDD + +KSG D+ G + G PT+ +I+ +
Sbjct: 279 NPWYSQNGDGLDLESCRIGTVTNCRFDVGDDAICIKSGKDQEGRERGKPTELFVIKDCV- 337
Query: 296 ISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM--- 352
+ +GSEMSGG++++ +++T I T G+R K+ GRG V+ I++ + M
Sbjct: 338 VYHGHGGFVIGSEMSGGVRNLFIKNLTFIGTDCGLRFKSTRGRGGLVENIWMEDIRMSDI 397
Query: 353 --KTMKYVFW----------MTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKL 400
+ +++ + +TG+ P + P + ++++ D Q+ K+
Sbjct: 398 PTEAIRFEMYYFNKSGVEDPLTGEMIVEKVP--VSETTPVFKNMYFKNIYVDGAKQALKI 455
Query: 401 DGIRNDPFTGICISNVTIK 419
GI P I N+ ++
Sbjct: 456 MGIPEMPVENIQFKNMIVR 474
>gi|393786392|ref|ZP_10374528.1| hypothetical protein HMPREF1068_00808 [Bacteroides nordii
CL02T12C05]
gi|392660021|gb|EIY53638.1| hypothetical protein HMPREF1068_00808 [Bacteroides nordii
CL02T12C05]
Length = 477
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 183/408 (44%), Gaps = 48/408 (11%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+TD+G GD NT A AI + GG + PG +LTG+ + ++ I K
Sbjct: 52 VTDYGAKGDALEMNTTAIQKAIDAAEQA---GGGIVTFSPGIYLTGALFVGNNVNFNIPK 108
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
L+ SQD ++ + + G + P S+L+ + ++G + ING+G+
Sbjct: 109 GTTLIGSQDIDDYKKIDTRVA-GVEMNWP----SALVNIIGKKNAAISG-DGVINGRGKV 162
Query: 179 WWIKYRKKQ-------------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSS 225
+W KYR + ++ RP I + +NV + N+ L W++H +YS
Sbjct: 163 FWDKYRSMRKEYDPKGLRWIVDYDCERPRGILIAECENVTVENIVLYQPGFWSLHILYSK 222
Query: 226 NVLIQGLTIRAPIDS--PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGM 283
V + G+ I I+ P+TDGI+ DS ++++ I DD +K+G D G++V
Sbjct: 223 YVTVDGIIISNNIEGRGPSTDGIDIDSSEYILVQNSNINCNDDNFCLKAGRDSDGLRVNR 282
Query: 284 PTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVK 343
P ++++IR I D GSE SGGI ++ A ++T + T+ G+R K+ RG ++
Sbjct: 283 PCRYVVIRDCIAGHGD-GLFTCGSETSGGINNIVAYNMTGMGTKYGLRFKSTCQRGGVIE 341
Query: 344 EIYVRRMTMKTMKYVF-----WMTGDYGSHPDPGFDPKALPT-----------------V 381
+IY+ + M ++ F W S G+D K +PT
Sbjct: 342 DIYLCNIEMIGVRDPFVVDLNWHPAYSTSKLPEGYDEKNVPTHWIKMLTPVDPKQGTPKF 401
Query: 382 TGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQW 429
+++ ++ A N K+ GI N G NV E + W
Sbjct: 402 RNVHFMNVTATNAQTCIKVSGIENSTIDGFDFDNVHFS-GENAGTISW 448
>gi|315500573|ref|YP_004089375.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315418585|gb|ADU15224.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 476
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 196/451 (43%), Gaps = 73/451 (16%)
Query: 20 LSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLT-DFGGVGDGKTSNTKAFNT 78
L LL GL++ + A + I A + V DFG GDG T NT A
Sbjct: 8 LHLLLATGLMTGKAARAEEDRE---ISIAAPGTLSTATVRAEDFGARGDGVTRNTAALQR 64
Query: 79 AISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLP--- 135
AI + A L++ PG +LTGS L S L + K L+ Q +P++
Sbjct: 65 AIEAAAAQNA----TLVLAPGTYLTGSLFLKSGMALRLDKGVTLVGEQTIESYPVMQTRI 120
Query: 136 -----PLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRK----- 185
P PS +L+ + TDV + G I+G G+ +W +++
Sbjct: 121 AGIELPWPS-------------ALLNVYDQTDVRIYG-EGKIDGNGKVFWDRFQSIRADY 166
Query: 186 --------KQFNVTRPYLIEVMFSDNVQISN------LTLIDSPSWNVHPVYSSNVLIQG 231
++ RP LI++ S +++ N L L S W V VYS +V + G
Sbjct: 167 EARGLRWAADYDAQRPRLIQIYNSSRIELGNGPMAEPLQLARSGFWTVQIVYSHDVKVSG 226
Query: 232 LTIRAPIDS--PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
+T+R ID P+TDG++ DS +E I + DD + +K+G D G++V PT++++
Sbjct: 227 ITVRNNIDGKGPSTDGVDIDSSHTILVEHADIDANDDALCLKAGRDADGLRVNRPTENVV 286
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN-TQSGVRIKTAVGRGAYVKEIYVR 348
IR I A + GSE SGGI++VR D+ I + G+ K+A RG +I +
Sbjct: 287 IRN-STIRAAYAGVTFGSETSGGIRNVRVHDLRVIGPVRYGILFKSAATRGGGASDIDIS 345
Query: 349 RMTMKTMKY-----VFWMTG-DYGSHPD-----PGF---------DPKALPTVTGINYRD 388
+ + + + W Y P+ P + K LP V I R
Sbjct: 346 DIDVAQAETGIRINLNWFPAYSYAKIPEGLTAYPAYWATLTAPVPRSKGLPQVHNIRIRR 405
Query: 389 MVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
+ A + + L+ + P + I I +VT++
Sbjct: 406 VTAKGLKTAVDLEAYADVPLSNIQIEDVTLE 436
>gi|345299336|ref|YP_004828694.1| glycoside hydrolase family protein [Enterobacter asburiae LF7a]
gi|345093273|gb|AEN64909.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 430
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 181/410 (44%), Gaps = 57/410 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG G+ +T A AI+ L++P G++LTGS L S TL++
Sbjct: 6 VCDFGADPSGRQVSTAAIQRAIAKTGH-----NDTLVIPAGRFLTGSLFLKSGMTLHLEA 60
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A LL SQ ++PL+ + G P +++I N DV +TGG TI+GQG
Sbjct: 61 GAQLLGSQSLDDYPLIDTRVA-GIDMRWP----AAIINIINCHDVSITGG-GTIDGQGLV 114
Query: 179 WWIKYRKKQ-------------------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNV 219
WW ++ ++ RP I V S+ + + + T +S WNV
Sbjct: 115 WWQRFWGDDEQGGMLGDYSARGLRWVVDYDCQRPRNILVYESERITLRDFTSRESGFWNV 174
Query: 220 HPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGI 279
H YS ++ + + I P+TDGI+ DSC R+E + DD + +K+G +
Sbjct: 175 HLCYSRHITLDSVQISNSA-GPSTDGIDIDSCEQVRVERCVVSCNDDNICIKAGRGQEAA 233
Query: 280 KVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG 339
+ ++IR C + I LGSE SGGI+ V E T G RIK+A RG
Sbjct: 234 SKARSARDIVIRD--CTPNSGSGITLGSETSGGIERVLIEHNRFNGTGVGFRIKSARNRG 291
Query: 340 AYVKEIYVRRMTMKTMK------------YVFWMTGDYGSHPD------------PGFDP 375
++++I VR + + ++ Y + GD PD G
Sbjct: 292 GFIRDIKVRHLQLVDVRFPVMIQLNWFAQYSYGERGDLTDKPDHWRKLADDVQGEAGLTH 351
Query: 376 KALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPK 425
+ T+ I+ R + +++ ++G + P + + +++V I +E K
Sbjct: 352 VSNLTLENISARRSESSVFSRAFFIEGYPDRPVSALTLASVVIDASEFGK 401
>gi|317474838|ref|ZP_07934108.1| glycoside hydrolase [Bacteroides eggerthii 1_2_48FAA]
gi|316908976|gb|EFV30660.1| glycoside hydrolase [Bacteroides eggerthii 1_2_48FAA]
Length = 492
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 172/378 (45%), Gaps = 39/378 (10%)
Query: 83 LSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGR 142
+ + ++ GG +I+P GKWL+G L S L+I + A ++ ++ LP + +
Sbjct: 49 IEQLSSQGGGTVIIPAGKWLSGRIELKSFVELHIARGAEIVFGGCAEDY--LPAVFTRHE 106
Query: 143 GRDEPGGRFSSLIFGTNLTDVVVTG-----------------GNATINGQGEPWWIKYRK 185
G + G + I+ N ++ +TG A++ + PW + +
Sbjct: 107 GVEIMGP--GAFIYANNQENIAITGEGRILGPDMDAEIRKRPNGASVVEKDIPWDMPVEQ 164
Query: 186 KQFN------VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPID 239
+ ++ RP I + NV I +T+ S WNV P+Y NV+I+G+T+ + +
Sbjct: 165 RIYDGMDGRTFYRPKTISPINCRNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS-TE 223
Query: 240 SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPD 299
P+ DGI+ +SC N IE + GDDC +K+G + G++VG T++++IR +
Sbjct: 224 VPSGDGIDIESCKNILIEYCTLNCGDDCFTLKAGRADDGLRVGKATENVVIRHSLA-QHG 282
Query: 300 SAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVF 359
I +GSE +G IK++ D T++G+R KT RG R+ M + F
Sbjct: 283 HGGITIGSETAGMIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSNHTIYERLRMINVGKAF 342
Query: 360 ---------WMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTG 410
+M +P+ D P ++ +D + ++ Q +GI PF+
Sbjct: 343 TWDLLGNAYYMGELAARYPERAVD-HLTPNISNTVIKDFIVESSKQFFTANGIPEIPFSN 401
Query: 411 ICISNVTIKLTEKPKELQ 428
I N TI + LQ
Sbjct: 402 TLIENGTIHCQQLISALQ 419
>gi|407684685|ref|YP_006799859.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'English Channel 673']
gi|407246296|gb|AFT75482.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'English Channel 673']
Length = 476
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 170/362 (46%), Gaps = 38/362 (10%)
Query: 87 AADGGAQLIVPPGKW-LTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRD 145
+A GG ++VP G W + G L S L++ + A LL S D S + LP + + G +
Sbjct: 92 SASGGGIVVVPKGTWQVDGPIRLKSKVNLHLEEGATLLFSGDPSHY--LPVVKTRWEGTE 149
Query: 146 EPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKY---------------------R 184
+S LI+ N+ DV +TG TI+G + +I +
Sbjct: 150 V--FTYSPLIYALNVEDVAITG-KGTIDGNAQSAFIGWYEKQNTDMHALRKMGFDGVPVE 206
Query: 185 KKQF---NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSP 241
K+QF + RP LI+ + V + + T ++SP W H VY+S+ ++ + + + +
Sbjct: 207 KRQFGEGHYLRPPLIQFFHAKRVLLEDYTALNSPFWVNHLVYTSHATVRRVKVESHL--Y 264
Query: 242 NTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSA 301
N DG++ +S EDN+ +GDD + +KSG D G +G+P+ ++ R D
Sbjct: 265 NNDGLDIESSQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVARNNDLGGED-- 322
Query: 302 AIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWM 361
I LGSEMSGGIK V E+ S R K+ + RG V+ + +R + + K++FW
Sbjct: 323 GIGLGSEMSGGIKRVFFENNILHEGDSAYRFKSNLDRGGRVEMVRIRGSEVASFKHLFWF 382
Query: 362 TGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLT 421
+Y S+ F T T I D+ +NV ++ P + ++ IK
Sbjct: 383 QLNYPSNLHGNFP----ATYTDIIIEDLTVENVGTVLEIHAPDAAPVHNVKFKDIKIKEA 438
Query: 422 EK 423
E+
Sbjct: 439 EE 440
>gi|189464040|ref|ZP_03012825.1| hypothetical protein BACINT_00375 [Bacteroides intestinalis DSM
17393]
gi|189438613|gb|EDV07598.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 532
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 162/352 (46%), Gaps = 55/352 (15%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
FG V D +T A AI + A GG + + PG +LTG+ + S L I K
Sbjct: 89 FGAVADSTVLSTDAIQKAIDSC---ALSGGGTVTLQPGYYLTGALFVKSGVNLQISKGVT 145
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLT-----------DVVVTGGNA 170
L+A D +P F S I G + + G
Sbjct: 146 LIACSDIHCYP-----------------EFRSRIAGIEMVWPAAVINIIGEEKASVSGEG 188
Query: 171 TINGQGEPWWIKY---RKK----------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSW 217
T++ +G+ +W KY RK+ ++ R I V S +V +SN TL+ + W
Sbjct: 189 TLDCRGKIFWDKYWAMRKEYEAKGLRWIVDYDCKRVRGILVENSSDVTLSNFTLMRTGFW 248
Query: 218 NVHPVYSSNVLIQGLTIRAPIDS--PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWD 275
+YS + + GL I I P+TDGI+ DS TN IE+ I DD + +K+G D
Sbjct: 249 GCQILYSDHCTVDGLIINNNIGGRGPSTDGIDIDSSTNILIENCEIDCNDDNICLKAGRD 308
Query: 276 EYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTA 335
G++V PT++++IR + I GSE SGGI++V A D+ A T + +++K+A
Sbjct: 309 ADGLRVNRPTENIVIRNCT-VHKGGGLITCGSETSGGIRNVLAHDLKAFGTSNVLQLKSA 367
Query: 336 VGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYR 387
+ RG ++ IY+ R+ K ++ +F DP ++PK + NY+
Sbjct: 368 MTRGGVIENIYITRVEAKNVRRIF--------GADPNWNPKYSYSTLPENYK 411
>gi|399032800|ref|ZP_10732032.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398068822|gb|EJL60216.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 456
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 192/421 (45%), Gaps = 56/421 (13%)
Query: 52 CRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSH 111
C++ S V DFG V K ++A N AIS +K GG +++P G+WLT + S+
Sbjct: 50 CKEFSIV--DFGAVQGNKNKTSEAINKAISKANKA---GGGVVVIPEGEWLTKKIHFKSN 104
Query: 112 FTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNAT 171
L+++K A+LL S+ ++ LP + S G + +S LI+ ++ +T G
Sbjct: 105 VNLHLNKGAVLLFSETPDDY--LPAVNSTWEGYE--CYNYSPLIYAYKCKNIAIT-GEGE 159
Query: 172 INGQGEPW--WIKYRKKQFNVT-------------------------RPYLIEVMFSDNV 204
+ + + W W K RP I+ +N+
Sbjct: 160 LKAKMDIWKEWFARPKAHMESLKRLYFLASYNKPMKERQMVNDSAHFRPQFIQFNRCENI 219
Query: 205 QISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSG 264
+ +T+ +SP W +HP S +V+++ L + A N DG++P+ N IE+ G
Sbjct: 220 LMDGVTITNSPFWTIHPFLSKDVVLRNLKVYA--HGHNNDGVDPEMSQNVLIENCIFDQG 277
Query: 265 DDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAI 324
DD +A+KSG ++ ++ ++++++R + +A+GSE+SGGI++V ++ T +
Sbjct: 278 DDAIAIKSGSNQDAWRLNTSSKNIVMRNC-TVKNGHQLVAIGSELSGGIENVFIDNCTVV 336
Query: 325 N---TQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKAL-PT 380
+ + IKT RG YV IY+ + + G G D + + L PT
Sbjct: 337 DGAKLNHLLFIKTNERRGGYVSNIYMSNIVSGKID-----AGILGIDTDVLYQWRDLVPT 391
Query: 381 -------VTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTN 433
+ I ++ A NV +K+ G + P I + NVT+ + + + + N N
Sbjct: 392 IERRLTPIKNIYLDNIKATNVKFISKISGQKELPVENIFLKNVTVDVVQGDQNIHENVLN 451
Query: 434 I 434
Sbjct: 452 F 452
>gi|420246079|ref|ZP_14749578.1| endopolygalacturonase, partial [Rhizobium sp. CF080]
gi|398043755|gb|EJL36633.1| endopolygalacturonase, partial [Rhizobium sp. CF080]
Length = 441
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 152/321 (47%), Gaps = 21/321 (6%)
Query: 42 SYTIEFQALNCRKHSAVL--TDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPG 99
S +EF R+ +A+L DFG + ++N A I+ L G L +P G
Sbjct: 72 SARLEF---TTRQETALLDIRDFGASPEA-SNNAPAIQRTIAALPP-----GGTLRIPAG 122
Query: 100 KWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGR------GRDEPGGRFSS 153
+WL+G L SH L + L A +P+LP + GR G E ++S
Sbjct: 123 RWLSGPIFLKSHMALLVEDGGELAAIASRENFPILPARHADGRILGTWEGVAE--ACYAS 180
Query: 154 LIFGTNLTDV-VVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLI 212
LI + V + G G WW ++ + R + + ++V +S LT+
Sbjct: 181 LINAIDCRGVHLAGAGIIDGGGDRGDWWSWPKETRQGARRARTVFLSACEDVTLSGLTIR 240
Query: 213 DSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKS 272
+SPSW VHPV ++ LTI DSPNTDG NP+S ++ R+ +I GDDC+A+K+
Sbjct: 241 NSPSWTVHPVLCKGLIAADLTIENDPDSPNTDGFNPESSSDIRLVGLHISVGDDCIALKA 300
Query: 273 GWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRI 332
G PT+H+ I + + A+ +GSEMS GI D+ + T G+RI
Sbjct: 301 GKRSPLGGPDRPTEHVRIENCL-MERGHGAVVIGSEMSAGISDIAIRNCHFKGTDRGLRI 359
Query: 333 KTAVGRGAYVKEIYVRRMTMK 353
KT GRG V +I + M+
Sbjct: 360 KTRRGRGGLVADIRLSDSLME 380
>gi|408501393|ref|YP_006865312.1| galacturan 1,4-alpha-galacturonidase [Bifidobacterium asteroides
PRL2011]
gi|408466217|gb|AFU71746.1| galacturan 1,4-alpha-galacturonidase [Bifidobacterium asteroides
PRL2011]
Length = 437
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 174/413 (42%), Gaps = 63/413 (15%)
Query: 75 AFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLL 134
+ AI +L+K DG L +P G TG L S T+ + K A+L D +
Sbjct: 15 SIQEAIDHLAK--CDGARVLTIPKGTTETGPLELISDLTIILEKGAVLKFKDDPHLYK-- 70
Query: 135 PPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQ------- 187
P + R L++ + ++ + G I+G G WW + + +
Sbjct: 71 ---PIWTRWEGIECHAMHPLLYAADCHNITIDG-EGIIDGNGAWWWRTFAQIERTDRTQP 126
Query: 188 --------------------------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHP 221
RP LI+ V++ +T+ +SP W +H
Sbjct: 127 QEDYELELARLNPDYKERAGGGARPSTQFLRPPLIQFWKCTAVKLKGITVQNSPFWTIHF 186
Query: 222 VYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKV 281
VY + V I G+T+R P ++ NTD ++ DS TN + ++ GDD + +KSG G++V
Sbjct: 187 VYCTQVTIDGVTVRNPANAINTDALDIDSSTNVAVSNSLFDVGDDAITLKSGSGPDGLRV 246
Query: 282 GMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAY 341
PT H+ ++ ++ IA+GSE +GGI DV E T TQ G+R+K+ GRG
Sbjct: 247 NKPTAHVNVKDCTILA-SHGGIAIGSETAGGINDVNVEKCTFSGTQRGIRLKSRRGRGGT 305
Query: 342 VKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPK---------------ALPTVTGINY 386
+K I +R + M W G + PG P+ P + I
Sbjct: 306 IKGITLRHLEMDHC----WCPIVLGMYFAPGVLPQEEDYVLSKSAQPVEATTPHIRNIRI 361
Query: 387 RDMVADNVTQSAK-LDGIRNDPFTGICISNVTIKLTEKPKELQ-WNCTNIQGI 437
D+ ADNV +A + G+ P + I L + + ++ W+ +G+
Sbjct: 362 EDVRADNVRSTAAFIVGLPESPIENVSIDQFEWHLAPEEELMETWHTEPTKGL 414
>gi|237710960|ref|ZP_04541441.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
gi|265750548|ref|ZP_06086611.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
gi|229454804|gb|EEO60525.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
gi|263237444|gb|EEZ22894.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
Length = 443
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 177/392 (45%), Gaps = 42/392 (10%)
Query: 54 KHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKW-LTGSFNLTSHF 112
K L FG GDGK AF+ A + + A GGA ++VP G++ L G + S+
Sbjct: 26 KKQISLISFGAKGDGKKDCKPAFDKA---MKRAAHMGGAHIVVPAGEYLLNGPIHFVSNV 82
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
L + + A L S + + + LP + + G +S I+G L +V + G I
Sbjct: 83 CLELQEGATLKFSSEPAFY--LPLVKTSWEGTFLQ--NYSPFIYGYQLENVSII-GKGVI 137
Query: 173 NGQGEPWWIKYRKKQ---------------------FNV---TRPYLIEVMFSDNVQISN 208
+G + ++ KQ F RP+L++ N+ I +
Sbjct: 138 DGNAGTTFATWKSKQKIGQQLSREMNHKEVPVAERNFGEGYWLRPHLVQFFDCKNITIED 197
Query: 209 LTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCV 268
+ + ++P W +H + S N++ +G+ A + N DGI+P+ N IE+ +GDD V
Sbjct: 198 VFITNAPFWCIHLLKSENIICRGIRYDAKL--VNNDGIDPEYTRNLLIENIEFNNGDDNV 255
Query: 269 AVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDIT-AINTQ 327
A+K G D G K P++++IIR C + LGSEMS GI+ V E+ T +
Sbjct: 256 AIKCGRDNDGWKTSCPSENIIIRN--CKFKGLHGVVLGSEMSSGIQHVFVENCTYGGYCK 313
Query: 328 SGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYR 387
G+ IKT RG ++++IYV ++ +F++T Y G D V I +
Sbjct: 314 RGIFIKTNPDRGGFIRDIYVNNCEFGEVEDLFYVTSMYAGE---GMDNHHFTEVHDIYVK 370
Query: 388 DMVADNVTQSA-KLDGIRNDPFTGICISNVTI 418
D+ V +A L G P + NV +
Sbjct: 371 DLKCKKVNVAALVLQGTEAKPIYNVTFDNVDV 402
>gi|345513259|ref|ZP_08792781.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|229437122|gb|EEO47199.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 919
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 196/438 (44%), Gaps = 54/438 (12%)
Query: 73 TKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWP 132
T N I+ +SK GG +++P GKW + L S+ L++ K A + S ++
Sbjct: 464 TDLVNRTIAEVSK---QGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAKDY- 519
Query: 133 LLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG-----------------GNATINGQ 175
LP + + G + G ++ I+ ++ +TG A++ +
Sbjct: 520 -LPAVFTRHEGVEIMGP--AAFIYANGENNIAITGEGTIYGPSMDAEIRKRPNGASVVEK 576
Query: 176 GEPWWIKYRKKQFN------VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
PW + ++ ++ RP I + NV I +T+ S WNV P+Y NV+I
Sbjct: 577 DVPWDMPIEQRIYDGMKGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVII 636
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
+G+T+ + P+ DGI+ +SC N IE + GDDC +K+G E G++VG PT+++I
Sbjct: 637 RGITVNS-TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVI 695
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRR 349
IR + I GSE +G IK++ D T++G+R KT RG Y R
Sbjct: 696 IRYSLA-QHGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYER 754
Query: 350 MTMKTMKYVF--------WMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLD 401
+ M + F + G+ + + P V I +D + ++ Q +
Sbjct: 755 LRMINVGKAFTWDLLGSAYYMGELAARYPARKVNRLTPNVKNILIKDFIVESADQFFTAN 814
Query: 402 GIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSR-VTPQAC----ELLPKKEPTD 456
GI PF + I N IK K+L + G T R +T ++ +L K D
Sbjct: 815 GIPEIPFNQVVIENGEIKC----KKLIGALNDAAGFTMRKLTIESLHNDIHILDGK---D 867
Query: 457 CFFPD--DKLPIDDVRLN 472
F D KLP +++R+N
Sbjct: 868 ILFEDIHFKLPSEEIRVN 885
>gi|167765390|ref|ZP_02437503.1| hypothetical protein BACSTE_03778 [Bacteroides stercoris ATCC
43183]
gi|167697018|gb|EDS13597.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 452
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 192/397 (48%), Gaps = 46/397 (11%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKW-LTGSFNLTSHFTLYIH 117
+TD+G D + A AIS+ + +GG +++P G + + G+ L S+ L+I
Sbjct: 53 VTDYGAKSDTTFDSCPAILQAISHCN---TNGGGTVLIPAGNYFIKGAITLKSNINLHIA 109
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
+ A L S + +++ LP + + G + +S I+ T+V VTG TI+G G
Sbjct: 110 EGARLEFSTEAADY--LPMVLTKWEGTE--CFNYSPFIYAYQCTNVAVTG-KGTIDGNGS 164
Query: 178 PWWIKY---------RKKQFNV---------------TRPYLIEVMFSDNVQISNLTLID 213
+ + R +Q + RP +I+ NV + +L + D
Sbjct: 165 VTFNGWHAIQGPAVDRLRQMGIDSVPVYQRVFGEGHYLRPCMIQFYGCKNVLVEDLKIYD 224
Query: 214 SPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSG 273
SP W +HPV+ NV ++ + I + ++ N DG +P+SCTN IE GDD +A+KSG
Sbjct: 225 SPFWIIHPVFCDNVTVRNVYIDS--NNYNNDGCDPESCTNVLIEGMDFNVGDDGIAIKSG 282
Query: 274 WDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIK 333
D+ G ++G T+++IIR AI +GSEMSGG++++ ED + ++G+ K
Sbjct: 283 RDQDGWRIGQATENVIIRNC---HFARWAITVGSEMSGGVRNIYIEDCKIDSCRNGIYFK 339
Query: 334 TAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTV-TGINYRDMVAD 392
+ RG Y + + +RR+ W ++ ++ G+ PT+ I D+ +
Sbjct: 340 SNPDRGGYFENLNMRRIEADV---CLWGVINFRTNYH-GYRGGNHPTLFRNICIEDVTCN 395
Query: 393 NVTQSAKL-DGIRNDPFTGICISNVTIKLTEKPKELQ 428
V A + +G+ I + N+ +K + PK +Q
Sbjct: 396 RVDSVALMANGLPEAKLHNITLRNINVK--KAPKAIQ 430
>gi|212694769|ref|ZP_03302897.1| hypothetical protein BACDOR_04302 [Bacteroides dorei DSM 17855]
gi|345516118|ref|ZP_08795611.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|423227933|ref|ZP_17214339.1| hypothetical protein HMPREF1063_00159 [Bacteroides dorei
CL02T00C15]
gi|423239066|ref|ZP_17220182.1| hypothetical protein HMPREF1065_00805 [Bacteroides dorei
CL03T12C01]
gi|423243193|ref|ZP_17224269.1| hypothetical protein HMPREF1064_00475 [Bacteroides dorei
CL02T12C06]
gi|212662623|gb|EEB23197.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|345455530|gb|EEO44191.2| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|392637680|gb|EIY31546.1| hypothetical protein HMPREF1063_00159 [Bacteroides dorei
CL02T00C15]
gi|392646068|gb|EIY39787.1| hypothetical protein HMPREF1064_00475 [Bacteroides dorei
CL02T12C06]
gi|392647477|gb|EIY41178.1| hypothetical protein HMPREF1065_00805 [Bacteroides dorei
CL03T12C01]
Length = 465
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 177/392 (45%), Gaps = 42/392 (10%)
Query: 54 KHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKW-LTGSFNLTSHF 112
K L FG GDGK AF+ A + + A GGA ++VP G++ L G + S+
Sbjct: 48 KKQISLISFGAKGDGKKDCKPAFDKA---MKRAAHMGGAHIVVPAGEYLLNGPIHFVSNV 104
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
L + + A L S + + + LP + + G +S I+G L +V + G I
Sbjct: 105 CLELQEGATLKFSSEPAFY--LPLVKTSWEGTFLQ--NYSPFIYGYQLENVSII-GKGVI 159
Query: 173 NGQGEPWWIKYRKKQ---------------------FNV---TRPYLIEVMFSDNVQISN 208
+G + ++ KQ F RP+L++ N+ I +
Sbjct: 160 DGNAGTTFATWKSKQKIGQQLSREMNHKEVPVAERNFGEGYWLRPHLVQFFDCKNITIED 219
Query: 209 LTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCV 268
+ + ++P W +H + S N++ +G+ A + N DGI+P+ N IE+ +GDD V
Sbjct: 220 VFITNAPFWCIHLLKSENIICRGIRYDAKL--VNNDGIDPEYTRNLLIENIEFNNGDDNV 277
Query: 269 AVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDIT-AINTQ 327
A+K G D G K P++++IIR C + LGSEMS GI+ V E+ T +
Sbjct: 278 AIKCGRDNDGWKTSCPSENIIIRN--CKFKGLHGVVLGSEMSSGIQHVFVENCTYGGYCK 335
Query: 328 SGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYR 387
G+ IKT RG ++++IYV ++ +F++T Y G D V I +
Sbjct: 336 RGIFIKTNPDRGGFIRDIYVNNCEFGEVEDLFYVTSMYAGE---GMDNHHFTEVHDIYVK 392
Query: 388 DMVADNVTQSA-KLDGIRNDPFTGICISNVTI 418
D+ V +A L G P + NV +
Sbjct: 393 DLKCKKVNVAALVLQGTEAKPIYNVTFDNVDV 424
>gi|224536297|ref|ZP_03676836.1| hypothetical protein BACCELL_01169 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522091|gb|EEF91196.1| hypothetical protein BACCELL_01169 [Bacteroides cellulosilyticus
DSM 14838]
Length = 473
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 197/418 (47%), Gaps = 52/418 (12%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+TD+G GD + NT A AI + GG ++ PG +LTGS + ++ L+I K
Sbjct: 49 VTDYGAKGDALSMNTMAIQKAIDAAEQ---AGGGIVVFHPGIYLTGSLFVGNNVNLHISK 105
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
L+ SQD ++ + + G + P S+LI + ++G + ING+G+
Sbjct: 106 GVTLIGSQDIGDYKKIDTRVA-GIEMEWP----SALINIIGKKNAAISG-DGVINGRGKV 159
Query: 179 WWIKYRKKQ-------------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSS 225
+W KY + ++ RP I + +NV + ++ L W++H +YS
Sbjct: 160 FWDKYWNMREDYEAKGLRWIVDYDCERPRGILIAECENVTVRDIVLYQPGFWSLHILYSK 219
Query: 226 NVLIQGLTIRAPIDS--PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGM 283
++ I G+ I I+ P+TDGI+ DS +++ I DD +K+G D G++V
Sbjct: 220 HITIDGIIISNNIEGHGPSTDGIDIDSSEYILVQNANINCNDDNFCLKAGRDSDGLRVNR 279
Query: 284 PTQHLIIRRLICISPDSAAI-ALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYV 342
P Q+++IR C++ + GSE SGGI+++ A + + T+ G+R K+ RG +
Sbjct: 280 PCQYVVIRD--CVAGSGGGMFTCGSETSGGIRNIVAYRMKGVGTKCGLRFKSTCQRGGVI 337
Query: 343 KEIYVRRMTMKTMKYVF-----WMTGDYGSHPDPGFDPKALPT-----VTGIN------- 385
++IY+ + M ++ F W S G+D + +P + ++
Sbjct: 338 EDIYLYDIEMIGVERPFVVDLNWNPAYSISKLPKGYDMEKIPVYWSKMLESVSLEQGTPV 397
Query: 386 YRDMVADNVTQS-----AKLDGIRNDPFTGICISNVTIKLTEKPKEL---QWNCTNIQ 435
+R++ DNVT S + GI N + NV I+ + K + +W ++Q
Sbjct: 398 FRNVTLDNVTASNARTCMNVVGIANSKIENFILRNVCIEGNKAGKIIWAKEWKLDDVQ 455
>gi|423242175|ref|ZP_17223285.1| hypothetical protein HMPREF1065_03908 [Bacteroides dorei
CL03T12C01]
gi|392639919|gb|EIY33727.1| hypothetical protein HMPREF1065_03908 [Bacteroides dorei
CL03T12C01]
Length = 919
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 196/438 (44%), Gaps = 54/438 (12%)
Query: 73 TKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWP 132
T N I+ +SK GG +++P GKW + L S+ L++ K A + S ++
Sbjct: 464 TDLVNRTIAEVSK---QGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAEDY- 519
Query: 133 LLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG-----------------GNATINGQ 175
LP + + G + G ++ I+ ++ +TG A++ +
Sbjct: 520 -LPAVFTRHEGVEIMGP--AAFIYANGENNIAITGEGTIYGPSMDAEIRKRPNGASVVEK 576
Query: 176 GEPWWIKYRKKQFN------VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
PW + ++ ++ RP I + NV I +T+ S WNV P+Y NV+I
Sbjct: 577 DVPWDMPIEQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVII 636
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
+G+T+ + P+ DGI+ +SC N IE + GDDC +K+G E G++VG PT+++I
Sbjct: 637 RGITVNS-TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVI 695
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRR 349
IR + I GSE +G IK++ D T++G+R KT RG Y R
Sbjct: 696 IRYSLA-QHGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYER 754
Query: 350 MTMKTMKYVF--------WMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLD 401
+ M + F + G+ + + P V I +D + ++ Q +
Sbjct: 755 LRMINVGKAFTWDLLGSAYYMGELAARYPARKVNRLTPDVKNILIKDFIVESADQFFTAN 814
Query: 402 GIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSR-VTPQAC----ELLPKKEPTD 456
GI PF + I N IK K+L + G T R +T ++ +L K D
Sbjct: 815 GIPEIPFNQVVIENGEIKC----KKLIGALNDAAGFTMRKLTIESLHNDIHILDGK---D 867
Query: 457 CFFPD--DKLPIDDVRLN 472
F D KLP +++R+N
Sbjct: 868 ILFEDIHFKLPSEEIRVN 885
>gi|212693801|ref|ZP_03301929.1| hypothetical protein BACDOR_03322 [Bacteroides dorei DSM 17855]
gi|212663690|gb|EEB24264.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 919
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 196/438 (44%), Gaps = 54/438 (12%)
Query: 73 TKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWP 132
T N I+ +SK GG +++P GKW + L S+ L++ K A + S ++
Sbjct: 464 TDLVNRTIAEVSK---QGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAEDY- 519
Query: 133 LLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG-----------------GNATINGQ 175
LP + + G + G ++ I+ ++ +TG A++ +
Sbjct: 520 -LPAVFTRHEGVEIMGP--AAFIYANGENNIAITGEGTIYGPSMDAEIRKRPNGASVVEK 576
Query: 176 GEPWWIKYRKKQFN------VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
PW + ++ ++ RP I + NV I +T+ S WNV P+Y NV+I
Sbjct: 577 DVPWDMPIEQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVII 636
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
+G+T+ + P+ DGI+ +SC N IE + GDDC +K+G E G++VG PT+++I
Sbjct: 637 RGITVNS-TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVI 695
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRR 349
IR + I GSE +G IK++ D T++G+R KT RG Y R
Sbjct: 696 IRYSLA-QHGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYER 754
Query: 350 MTMKTMKYVF--------WMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLD 401
+ M + F + G+ + + P V I +D + ++ Q +
Sbjct: 755 LRMINVGKAFTWDLLGSAYYMGELAARYPARKVNRLTPDVKNILIKDFIVESADQFFTAN 814
Query: 402 GIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSR-VTPQAC----ELLPKKEPTD 456
GI PF + I N IK K+L + G T R +T ++ +L K D
Sbjct: 815 GIPEIPFNQVVIENGEIKC----KKLIGALNDAAGFTMRKLTIESLHNDIHILDGK---D 867
Query: 457 CFFPD--DKLPIDDVRLN 472
F D KLP +++R+N
Sbjct: 868 ILFEDIHFKLPSEEIRVN 885
>gi|116619801|ref|YP_821957.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222963|gb|ABJ81672.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 528
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 124/461 (26%), Positives = 203/461 (44%), Gaps = 54/461 (11%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ D+G DG T+AF +AI A GG + VP G++++G L S+ L+I
Sbjct: 26 IADYGARKDGSALATEAFRSAIQ---AAKAAGGGTVYVPAGQYISGPIELVSNLVLHIDA 82
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE- 177
A L +P S GR + LI G NL +V +TG Q E
Sbjct: 83 GATL-------RFPATRLPFSRGRWQGIEALTPVPLIGGRNLENVSITGRGVLTTSQPEW 135
Query: 178 ----------PWWI---------------KYRKKQFNVTRPYLIEVMFSDNVQISNLTLI 212
P W+ +Y+K + P I +M S NV I + ++
Sbjct: 136 TRIMGDPGSGPDWLHLLEILELKKPIPDQEYQKAAPQLL-PMFISLMESKNVLIQGIHIV 194
Query: 213 DSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKS 272
S W + VY N ++ G+ + +T GI DS N RI D YI +GDD + +KS
Sbjct: 195 GSAMWPIQLVYDDNAVVSGVMVET-FGGHDTGGIYVDSSRNVRISDCYIDTGDDGIVIKS 253
Query: 273 GWDEYGIKVGMPTQHLIIRRLIC-ISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVR 331
G D G +V P +++ I C + A+ LGSE+SG I+++ A +IT TQ GVR
Sbjct: 254 GKDADGRRVNRPAENISITN--CNVHRAHGAVVLGSEISGWIRNLVASNITCDGTQMGVR 311
Query: 332 IKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGIN-YRD-- 388
IKT GRG ++++ TM+ + ++ Y P+ P P + YR+
Sbjct: 312 IKTRRGRGGGIEDVRFDNWTMQNVARGINISSFYVMAPENKSTPPEEPVSERTSIYRNIA 371
Query: 389 ---MVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQA 445
M +N ++GI P G+ IS++ T + +N ++ +++ +
Sbjct: 372 ISHMTINNSRLVIDIEGIPEMPIDGLRISDIV--ATAQIGMKAYNTKAMELHNVQLSAKT 429
Query: 446 CELLPKKEPTDCFFPD--DKLPIDD---VRLNTCSASISKA 481
+ ++ TD + + P+++ VRL+ C +I +
Sbjct: 430 GPVFLIRDSTDLELDNVGSRRPLEEAPVVRLDHCPGAILRG 470
>gi|403057563|ref|YP_006645780.1| polygalacturonase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
gi|402804889|gb|AFR02527.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 460
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 193/440 (43%), Gaps = 60/440 (13%)
Query: 16 VIKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGD--GKTSNT 73
+ ++++ +TLG+ + + + +++F C +T +G G NT
Sbjct: 6 ALSLMASCITLGI------QAGTAQAASSVKFPDKTCD-----VTQYGAEGHRLQIALNT 54
Query: 74 KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPL 133
+AF AI + AA GG + VP G +L L S+ L + KDA ++AS +E+ +
Sbjct: 55 QAFQKAIDDC---AAAGGGTVHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTEEAAYRA 111
Query: 134 LPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRK------KQ 187
Y E + I + +V +TG TI+GQG WW ++R+ K+
Sbjct: 112 TEKT-KYA----EAENGWLPFISIADAQNVAITG-QGTIDGQGAVWWERWRENIRATGKK 165
Query: 188 FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGIN 247
RP LI + S NV + +TL SPS++V YS +V + G I +P +PNTD I+
Sbjct: 166 GGTDRPRLIYIKSSSNVLVDGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDAID 225
Query: 248 PDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGS 307
P N RI +NYI DD +A+K+ + G+ I ++ I++GS
Sbjct: 226 PIDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANNIL---KQGRGISIGS 282
Query: 308 EMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGS 367
E SGG+ +V E+ + G+RIKT G+G VK I R M ++ Y +
Sbjct: 283 ETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKA 342
Query: 368 HP--------------------------DPG--FDPKALPTVTGINYRDMVADNVTQSAK 399
P DP FD P + + ++ + T++A
Sbjct: 343 APIVQAEVDKMLAEGGFTMGEQIYPPDTDPAQPFDQYKTPHFSNVTIENLESTGKTKAAA 402
Query: 400 -LDGIRNDPFTGICISNVTI 418
+ G+ P +G NV I
Sbjct: 403 YIIGVPEAPLSGFHFDNVRI 422
>gi|397656221|ref|YP_006496923.1| Polygalacturonase [Klebsiella oxytoca E718]
gi|394344836|gb|AFN30957.1| Polygalacturonase [Klebsiella oxytoca E718]
Length = 460
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 182/409 (44%), Gaps = 63/409 (15%)
Query: 72 NTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEW 131
NT A AI + AA GG ++VP G +LT L ++ L + KDA L+AS + + +
Sbjct: 53 NTDAIQKAIDDC---AAAGGGTVLVPKGNFLTNPLFLKNNIQLKLEKDATLVASTEVAAY 109
Query: 132 PLLPPLPSYGRGRDEPGGRFSSLIFG----TNLTDV--VVTGGNATINGQGEPWWIKYRK 185
RG D+ R++ G ++ D V G TI+GQG WW ++R+
Sbjct: 110 ----------RGDDKT--RYAEAENGWLPFISIADAQNVAIVGEGTIDGQGAVWWERWRE 157
Query: 186 ------KQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPID 239
K+ RP LI + + NV I +TL SPS++V Y+ +V I G I +P
Sbjct: 158 NIRATGKKGGTDRPRLIYITRASNVLIDGVTLTHSPSFHVVTRYAHDVDINGTRILSPWH 217
Query: 240 SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPD 299
+PNTD I+P N RI +NYI DD +A+K+ + G+ I +
Sbjct: 218 APNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPRFPEGVVDNIYIANNTL---KQ 274
Query: 300 SAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVF 359
I++GSE +GG+ +V E+ T + G+RIK+ G+G VK I R M ++
Sbjct: 275 GRGISIGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVKNIVYRNTRMHNVEVPL 334
Query: 360 WMTGDYGSHP--------------------------DPG--FDPKALPTVTGINYRDMVA 391
+ Y + P DP FD P + I ++ +
Sbjct: 335 VFSAYYKAAPIVQAEVDKLLQAGGFTLGEQIYPPDSDPKQPFDKYKTPHFSNITVENLTS 394
Query: 392 DNVTQSAK-LDGIRNDPFTGICISNVTIK----LTEKPKELQWNCTNIQ 435
+++A + G P +G SNV I+ L + EL+ N+Q
Sbjct: 395 TGDSKAAAYIIGTPEAPLSGFHFSNVNIEADRGLRIRNAELESKGLNLQ 443
>gi|227329691|ref|ZP_03833715.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 460
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 148/304 (48%), Gaps = 18/304 (5%)
Query: 72 NTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEW 131
NT+AF AI + AA GG + VP G +L L S+ L + KDA ++AS +E+ +
Sbjct: 53 NTQAFQKAIDDC---AAAGGGTVHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTEEAAY 109
Query: 132 PLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRK------ 185
Y E + I + +V +TG TI+GQG WW ++R+
Sbjct: 110 RATEKT-KYA----EAENGWLPFISIADAQNVAITG-QGTIDGQGAVWWERWRENIRATG 163
Query: 186 KQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
K+ RP LI + S+NV + +TL SPS++V YS +V + G I +P +PNTD
Sbjct: 164 KKGGTDRPRLIYIKSSNNVLVDGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDA 223
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
I+P N RI +NYI DD +A+K+ + G+ I ++ I++
Sbjct: 224 IDPIDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANNIL---KQGRGISI 280
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDY 365
GSE SGG+ +V E+ + G+RIKT G+G VK I R M ++ Y
Sbjct: 281 GSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYY 340
Query: 366 GSHP 369
+ P
Sbjct: 341 KAAP 344
>gi|423232692|ref|ZP_17219092.1| hypothetical protein HMPREF1063_04912 [Bacteroides dorei
CL02T00C15]
gi|423247384|ref|ZP_17228434.1| hypothetical protein HMPREF1064_04640 [Bacteroides dorei
CL02T12C06]
gi|392623131|gb|EIY17236.1| hypothetical protein HMPREF1063_04912 [Bacteroides dorei
CL02T00C15]
gi|392632524|gb|EIY26483.1| hypothetical protein HMPREF1064_04640 [Bacteroides dorei
CL02T12C06]
Length = 919
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 196/438 (44%), Gaps = 54/438 (12%)
Query: 73 TKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWP 132
T N I+ +SK GG +++P GKW + L S+ L++ K A + S ++
Sbjct: 464 TDLVNRTIAEVSK---QGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAEDY- 519
Query: 133 LLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG-----------------GNATINGQ 175
LP + + G + G ++ I+ ++ +TG A++ +
Sbjct: 520 -LPAVFTRHEGVEIMGP--AAFIYANGENNIAITGEGTIYGPSMDAEIRKRPNGASVVEK 576
Query: 176 GEPWWIKYRKKQFN------VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
PW + ++ ++ RP I + NV I +T+ S WNV P+Y NV+I
Sbjct: 577 DVPWDMPIEQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVII 636
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
+G+T+ + P+ DGI+ +SC N IE + GDDC +K+G E G++VG PT++++
Sbjct: 637 RGITVNS-TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVV 695
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRR 349
IR + I GSE +G IK++ D T++G+R KT RG Y R
Sbjct: 696 IRYSLA-QHGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYER 754
Query: 350 MTMKTMKYVF--------WMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLD 401
+ M + F + G+ + + P V I +D + ++ Q +
Sbjct: 755 LRMINVGKAFTWDLLGSAYYMGELAARYPARKVNRLTPDVKNILIKDFIVESADQFFTAN 814
Query: 402 GIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSR-VTPQAC----ELLPKKEPTD 456
GI PF + I N IK K+L + G T R +T ++ +L K D
Sbjct: 815 GIPEIPFNQVVIENGEIKC----KKLIGALNDAAGFTMRKLTIESLHNDIHILDGK---D 867
Query: 457 CFFPD--DKLPIDDVRLN 472
F D KLP +++R+N
Sbjct: 868 ILFEDIHFKLPSEEIRVN 885
>gi|410664607|ref|YP_006916978.1| polygalacturonase pga28A [Simiduia agarivorans SA1 = DSM 21679]
gi|409026964|gb|AFU99248.1| polygalacturonase pga28A [Simiduia agarivorans SA1 = DSM 21679]
Length = 466
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 187/406 (46%), Gaps = 55/406 (13%)
Query: 58 VLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
V+ DFG V D S+ A ++ A GG +++ G + T + +L S+ L++
Sbjct: 59 VVEDFGAVAD---SDEDATRAIADAIAAAHAAGGGRVVCAKGVYQTAAIHLKSNVELHVA 115
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI-NGQG 176
+ A L D S + LP + + G + G +S LI+ ++ VTGG N
Sbjct: 116 EGATLSFVTDPSRY--LPAVFTRWEGMEMMG--YSPLIYAYGQQNIAVTGGGVLDGNAND 171
Query: 177 EPWW---------------------------------IKYRKKQF---NVTRPYLIEVMF 200
+ WW + R++ + + RP ++
Sbjct: 172 QTWWPWKGAHKERHWDLIEGEDQRPARDALQADVLAGVDPRERHYAEGSFLRPAFVQFYA 231
Query: 201 SDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNY 260
+ V+I +TL++SP W +HPV +V+++G+T R+ PN DG +P+SC N IE
Sbjct: 232 CNQVKIEGVTLVNSPFWLLHPVLCESVVVRGVTCRS--HGPNNDGCDPESCKNVLIEQCV 289
Query: 261 IVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRAE 319
+GDDC+A+KSG +E G +VG+ +++++R C D + LGSE+SGG +++ E
Sbjct: 290 FDTGDDCIALKSGRNEDGRRVGVAVENVVVRH--CEMRDGHGGLVLGSEISGGARNIFME 347
Query: 320 --DITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKA 377
+ + + + +R KT RG ++++ VR + ++ + + Y + G +
Sbjct: 348 HCSMNSPHLERALRFKTNARRGGVIEKVRVRHVHIQQAQEALVVNFHY----EEGEAGEH 403
Query: 378 LPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEK 423
+PTV I D+ D V + L G ++P I + K
Sbjct: 404 MPTVRDILVEDLRCDQVERVFHLRGFAHNPVGAITLRRAQFGRVAK 449
>gi|315570520|gb|ADU33264.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 407
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 157/304 (51%), Gaps = 20/304 (6%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+TDFG GK ++T A AI K + D G + G++L+G F L S+ TL
Sbjct: 25 VTDFGADSTGKNASTTAITKAID---KASEDYGGVVRFTKGQYLSGPFELKSNITLQFDD 81
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
D +L D E+P L L G P ++ LI + +VV+ G A ++G G P
Sbjct: 82 DVVLKFLDDPKEYPPLTKLLPNGLTFSLP---YTPLIRAFIVRNVVIRG-KAILDGNGAP 137
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAP- 237
WW + RP + S N+ + ++ + +SP +N+ +Y+ +VL++G++I+ P
Sbjct: 138 WWKRLPPPN---ARPQFLFFYQSYNITVEDVAIRNSPMYNIQLIYTDHVLLKGISIKNPP 194
Query: 238 --ID-SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKV--GMPTQHLIIRR 292
+D PNTDGIN + C + + + +GDDCVA+ + + G K+ PT+H++I
Sbjct: 195 SYVDPGPNTDGINCNPCRYLHVTNVTVDTGDDCVALDA---DLGDKLMGRWPTEHILIEN 251
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
+ A+++GS + G++++ + T G+ IKT GRG V++I+ +TM
Sbjct: 252 SHMFA-GHGAVSIGSATTAGLRNITVRNCIFNGTDRGLYIKTRRGRGGLVEDIHYHNITM 310
Query: 353 KTMK 356
++
Sbjct: 311 LNIR 314
>gi|281419687|ref|ZP_06250686.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
gi|281406216|gb|EFB36896.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
Length = 467
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 196/425 (46%), Gaps = 64/425 (15%)
Query: 55 HSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTL 114
H ++L ++GG GDG T NT+AF AIS L+K GG L VP G +LTG +L + L
Sbjct: 45 HVSIL-EYGGNGDGLTMNTQAFAKAISKLNKM---GGGHLNVPAGIYLTGLISLKDNIDL 100
Query: 115 YIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATING 174
++ K+A+++ S+D+++ + R P I + ++ +TG TI+G
Sbjct: 101 HLEKNAIIVLSEDKNDHFKIDKTTGKKESRATPA------INASKRKNISITG-EGTIDG 153
Query: 175 QGEPWW----------IKYRKKQ---------------FNV---------------TRPY 194
GE WW +++++ Q FN+ R +
Sbjct: 154 NGE-WWRPVKRSKVSDVEWKEFQTMGGTLNEKGDIWYPFNLKHKPNVAENMDEQEKNRTH 212
Query: 195 LIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNT 254
+I +NV + +TL++SP +++ P NV+I G+T++ P ++ N D I+ SC +
Sbjct: 213 MIRFTSCENVLVQGVTLLNSPKFHIIPTRCKNVIIDGITVKCPWNAQNGDAIDISSCKDV 272
Query: 255 RIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIK 314
I +N I +GDD + +K G P +++ I+ + +GSE SGG+K
Sbjct: 273 LIVNNVIDAGDDGICMKGG-AGAAGVAAGPCENINIQDN-TVYHAHGGFVIGSEFSGGMK 330
Query: 315 DVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK--YVFWMTGDYGSHPDPG 372
++ + T T +G+R K+AV RG + IY+ + M +K + + T + +H G
Sbjct: 331 NIVVRNNTFQGTDTGLRFKSAVKRGGTSENIYIDHIYMTDIKDAAITFETTYFDNH--VG 388
Query: 373 FDPKALPTVTGI--NYRDMVADNVTQSAKLDGIRNDPFTG----ICISNVTIKLTEKPKE 426
+ P N++D+ N+ GI G I I N I T++ K
Sbjct: 389 AQKQTTPVKQEFLPNFQDIHMSNIYVRGCETGIEAHGAEGMVHDITIKNSNIFYTKEAKN 448
Query: 427 LQWNC 431
+ C
Sbjct: 449 IDAVC 453
>gi|388495020|gb|AFK35576.1| unknown [Lotus japonicus]
Length = 172
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 100/161 (62%), Gaps = 11/161 (6%)
Query: 309 MSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSH 368
MSGG+ +V AEDI +++S +RIKT+ GRG YV+ +Y+ MT+ + TG YG H
Sbjct: 1 MSGGVSEVHAEDIYIFDSRSAIRIKTSPGRGGYVRNVYISNMTLANIDIAIRFTGLYGEH 60
Query: 369 PDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQ 428
PD +DP ALP + I +D++ +NV ++ + GI+ F IC+SN+++ ++ K +
Sbjct: 61 PDEAYDPDALPLIERITIKDVIGENVKRAGLIQGIKGYDFVNICLSNISLNVSSK---VP 117
Query: 429 WNCTNIQGITSRVTPQACELLPKK----EPTDCFFPDDKLP 465
WNC++++G + V+P+ CE L ++ +DC+ KLP
Sbjct: 118 WNCSDVKGYSDLVSPEVCEPLKERIFPEHWSDCY----KLP 154
>gi|423112756|ref|ZP_17100447.1| hypothetical protein HMPREF9689_00504 [Klebsiella oxytoca 10-5245]
gi|376390250|gb|EHT02936.1| hypothetical protein HMPREF9689_00504 [Klebsiella oxytoca 10-5245]
Length = 460
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 182/409 (44%), Gaps = 63/409 (15%)
Query: 72 NTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEW 131
NT A AI + AA GG ++VP G +LT L ++ L + KDA L+AS + + +
Sbjct: 53 NTDAIQKAIDDC---AAAGGGTVLVPKGNFLTNPLFLKNNIQLKLEKDATLVASTEVAAY 109
Query: 132 PLLPPLPSYGRGRDEPGGRFSSLIFG----TNLTDV--VVTGGNATINGQGEPWWIKYRK 185
RG D+ R++ G ++ D V G TI+GQG WW ++R+
Sbjct: 110 ----------RGDDKT--RYAEAENGWLPFISIADAQNVAIVGEGTIDGQGAVWWERWRE 157
Query: 186 ------KQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPID 239
K+ RP LI + + NV I +TL SPS++V Y+ +V I G I +P
Sbjct: 158 NIRATGKKGGTDRPRLIYITRASNVLIDGVTLTHSPSFHVVTRYAHDVDINGTRILSPWH 217
Query: 240 SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPD 299
+PNTD I+P N RI +NYI DD +A+K+ + G+ I +
Sbjct: 218 APNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPRFPDGVVDNIYIANNTL---KQ 274
Query: 300 SAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVF 359
I++GSE +GG+ +V E+ T + G+RIK+ G+G VK I R M ++
Sbjct: 275 GRGISIGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVKNIVYRNTRMHNVEVPL 334
Query: 360 WMTGDYGSHP--------------------------DPG--FDPKALPTVTGINYRDMVA 391
+ Y + P DP FD P + I ++ +
Sbjct: 335 VFSAYYKAAPIVQAEVDKLLQAGGFTLGEQIYPPDSDPKQPFDKYKTPHFSNITVENLTS 394
Query: 392 DNVTQSAK-LDGIRNDPFTGICISNVTIK----LTEKPKELQWNCTNIQ 435
+++A + G P +G SNV I+ L + EL+ N+Q
Sbjct: 395 TGDSKAAAYIIGTPEAPLSGFHFSNVNIEADRGLRIRNAELESKGLNLQ 443
>gi|372221526|ref|ZP_09499947.1| glycoside hydrolase family protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 487
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 163/312 (52%), Gaps = 28/312 (8%)
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDA 120
DFG +NTKA TAI + AA GG + PG +L+GS L + L++ K+
Sbjct: 58 DFGAQSKVGFTNTKAIQTAIDSC---AASGGGIVKFRPGTYLSGSIFLKDNVQLHLDKEV 114
Query: 121 LLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW 180
LL SQ+ ++ + + G + P ++L+ + +V+++G TI+GQG+ +W
Sbjct: 115 TLLGSQNILDYKEIATRVA-GIEMEWP----AALVNAIDTQNVLISG-EGTIDGQGKVFW 168
Query: 181 IKY---RKKQF-----------NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSN 226
Y RK + + RP + + S NV + +LTL + W V +YS +
Sbjct: 169 DMYWDMRKNDYEPKGLRWIVDYDAKRPRTVLIQNSKNVIVRDLTLQRAGFWTVQILYSKH 228
Query: 227 VLIQGLTIRAPI--DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMP 284
V GLTIR I P+TDGI+ DS + +++ I DD +K+G D G++V P
Sbjct: 229 VTTDGLTIRNNIGGHGPSTDGIDIDSSSYILVQNCDIDCNDDNFCLKAGRDWDGLRVNRP 288
Query: 285 TQHLIIRRLICISPDSAAI-ALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVK 343
T++++I+ C + A + +GSE SGGI+ + A +I T +G+++K+A RG ++
Sbjct: 289 TEYVVIKD--CKTGKGAGLLTVGSETSGGIRHIYANNIQGKGTDAGLKLKSATTRGGVIE 346
Query: 344 EIYVRRMTMKTM 355
+I M M ++
Sbjct: 347 DIIFDNMKMDSV 358
>gi|375259243|ref|YP_005018413.1| glycoside hydrolase [Klebsiella oxytoca KCTC 1686]
gi|365908721|gb|AEX04174.1| glycoside hydrolase family protein [Klebsiella oxytoca KCTC 1686]
Length = 460
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 182/409 (44%), Gaps = 63/409 (15%)
Query: 72 NTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEW 131
NT A AI + AA GG ++VP G +LT L ++ L + KDA L+AS + + +
Sbjct: 53 NTDAIQKAIDDC---AAAGGGTVLVPKGNFLTNPLFLKNNIQLKLEKDATLVASTEVAAY 109
Query: 132 PLLPPLPSYGRGRDEPGGRFSSLIFG----TNLTDV--VVTGGNATINGQGEPWWIKYRK 185
RG D+ R++ G ++ D V G TI+GQG WW ++R+
Sbjct: 110 ----------RGDDKT--RYAEAENGWLPFISIADAQNVAIVGEGTIDGQGAVWWERWRE 157
Query: 186 ------KQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPID 239
K+ RP LI + + NV I +TL SPS++V Y+ +V I G I +P
Sbjct: 158 NIRATGKKGGTDRPRLIYITRASNVLIYGVTLTHSPSFHVVTRYAHDVDINGTRILSPWH 217
Query: 240 SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPD 299
+PNTD I+P N RI +NYI DD +A+K+ + G+ I +
Sbjct: 218 APNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPRFPEGVVDNIYIANNTL---KQ 274
Query: 300 SAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVF 359
I++GSE +GG+ +V E+ T + G+RIK+ G+G VK I R M ++
Sbjct: 275 GRGISIGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVKNIVYRNTRMHNVEVPL 334
Query: 360 WMTGDYGSHP--------------------------DPG--FDPKALPTVTGINYRDMVA 391
+ Y + P DP FD P + I ++ +
Sbjct: 335 VFSAYYKAAPIVQAEVDKLLQAGGFTLGEQIYPPDSDPKQPFDKYKTPHFSNITVENLTS 394
Query: 392 DNVTQSAK-LDGIRNDPFTGICISNVTIK----LTEKPKELQWNCTNIQ 435
+++A + G P +G SNV I+ L + EL+ N+Q
Sbjct: 395 TGDSKAAAYIIGTPEAPLSGFHFSNVNIEADRGLRIRNAELESKGLNLQ 443
>gi|255034418|ref|YP_003085039.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254947174|gb|ACT91874.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 528
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 175/403 (43%), Gaps = 45/403 (11%)
Query: 73 TKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWP 132
TKA +AI +SK G +IVP G W TG +L S+ L+I + A L S + ++
Sbjct: 86 TKAIQSAIDEVSKKK---GGTVIVPAGTWRTGRISLKSNVNLHISEGAELRFSPEIEDY- 141
Query: 133 LLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTR 192
LP + + G + +LI+ ++ VTG + P ++ R NV
Sbjct: 142 -LPAVFTRNEGVELMS--LGALIYANGQENIAVTGKGKLVGPPDGP--VRQRYMNVNVIE 196
Query: 193 ------------------------PYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
P I + V I +TL ++P WNV PVY NV+
Sbjct: 197 KVVPADKPVSERVYEGKDGGFIFPPMFISPINCKKVYIEGITLHNTPFWNVVPVYCDNVI 256
Query: 229 IQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHL 288
I+G+T+++ + P DGI+ +S N IE + SGDDC +K+G E GI+V PT+++
Sbjct: 257 IRGITVQS-VGIPRGDGIDIESSRNVLIEYCTLSSGDDCFTIKAGRGEDGIRVNKPTENV 315
Query: 289 IIRRLICISPDS-AAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYV 347
+IR C++ + I GSE +G I++V D +T +G+R KT R + I
Sbjct: 316 VIRH--CLAREGHGGITCGSETAGMIRNVYVRDCVFDDTDTGLRFKTRRSRAGGGENIVY 373
Query: 348 R--RMTMKTMKYVFWMTG--DYGSHPDPGFDPKAL----PTVTGINYRDMVADNVTQSAK 399
RM ++ F M G Y P+ + P I R++V D
Sbjct: 374 ENIRMNLRGDAVKFDMLGSRQYVGELADRLPPRPVNDLTPAYRNITARNIVVDKARTFID 433
Query: 400 LDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVT 442
+ GI P + I N + K ++G T VT
Sbjct: 434 ITGIPESPAANLLIENAIVNARTAFKASDAERVTVRGATLTVT 476
>gi|251790610|ref|YP_003005331.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
gi|247539231|gb|ACT07852.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
Length = 467
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 167/352 (47%), Gaps = 19/352 (5%)
Query: 72 NTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEW 131
NT +F AI AA GG ++VP G +L L S+ L++ K A L+AS ES +
Sbjct: 60 NTSSFQKAIDEC---AAAGGGTVLVPAGNYLVEPLFLKSNVRLHLEKHATLVASTGESAY 116
Query: 132 PLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRK------ 185
S + E G + I + +V +TG TI+GQG WW ++R+
Sbjct: 117 R---ATDSTRYAQAENG--WLPFISIADAQNVAITG-EGTIDGQGAVWWERWREAIRATG 170
Query: 186 KQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
K+ RP LI + S V + +TL +SPS++V Y+ +V + G +I AP +PNTD
Sbjct: 171 KKGGTDRPRLIYITRSSQVLVDGVTLTNSPSFHVVMRYARDVTVNGTSIIAPWHAPNTDA 230
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
I+P N RI +N I DD +A+K+ + G+ I ++ I++
Sbjct: 231 IDPIDSQNIRITNNVIDCNDDHIAIKAEKPDSRFPDGVVDNVYIANNVL---KQGRGISI 287
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDY 365
GSE SGG+ +V E+ + G+RIK+ G+G VK + R M ++ +G Y
Sbjct: 288 GSETSGGVNNVLVENNRFEGSMYGIRIKSLRGKGGEVKNVTYRHTRMVNVEVPLVFSGYY 347
Query: 366 GSHPDPGFDPKALPTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNV 416
+ P + L G + + T+ A+ D ++ F+ I I ++
Sbjct: 348 QAAPIVQAEVDKLLQAGGFTLGEQIYPPDTEPAQPFDKVKTPHFSNITIVDL 399
>gi|402307601|ref|ZP_10826623.1| pectate lyase family protein [Prevotella sp. MSX73]
gi|400378313|gb|EJP31171.1| pectate lyase family protein [Prevotella sp. MSX73]
Length = 471
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 175/388 (45%), Gaps = 44/388 (11%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLT-GSFNLTSHFTLYIH 117
L G DGKT A A+ K+ GGA++++ G +L G +L L I
Sbjct: 59 LARLGAKTDGKTDARPAMIKALRQARKW---GGARIVLSGGVFLMCGPIHLVDGVCLDIR 115
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
+ A L S + + LP + + G +S +I+G NL DV + G I+G
Sbjct: 116 EGATLRFSPEPRFY--LPTVATSWEG--TFLNNYSPMIYGRNLHDVSIVG-KGLIDGNCA 170
Query: 178 PWWIKYRKKQ------------------------FNVTRPYLIEVMFSDNVQISNLTLID 213
+ +R +Q + RP LI++ NV I + +I+
Sbjct: 171 ATFATWRARQKEGQTLSRRMNHEERPLAERNFGEGHWLRPQLIQLFGCRNVTIEGVKIIN 230
Query: 214 SPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSG 273
SP W +H + S NV+ +GL A + N DGI+P+S N IED +GDD VA+KSG
Sbjct: 231 SPFWCIHLLQSENVICRGLRYDAKL--VNNDGIDPESSRNVLIEDVSFDNGDDNVAIKSG 288
Query: 274 WDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDIT-AINTQSGVRI 332
D G P++++IIRR C A+ +GSEMSGG+++V ED A + G+ I
Sbjct: 289 RDNDGWTHAHPSENIIIRR--CRFKGLHAVVIGSEMSGGVRNVFVEDCDFAGYCKRGLYI 346
Query: 333 KTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSH--PDPGFDPKALPTVTGINYRDMV 390
KT RG YVK IY++ ++ + ++T Y F V G++ R
Sbjct: 347 KTNPDRGGYVKNIYMKDCRFDEVEDLIYVTSMYAGEGLGSRHFSEVEHLLVDGVSCRKAR 406
Query: 391 ADNVTQSAKLDGIRNDPFTGICISNVTI 418
A + L G + P + I V I
Sbjct: 407 AAGIV----LQGTKAKPIRDVTIRRVEI 430
>gi|227114428|ref|ZP_03828084.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 460
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 147/304 (48%), Gaps = 18/304 (5%)
Query: 72 NTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEW 131
NT+AF AI + AA GG + VP G +L L S+ L + KDA ++AS +E+ +
Sbjct: 53 NTQAFQKAIDDC---AAAGGGTVHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTEEAAY 109
Query: 132 PLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRK------ 185
Y E + I + +V +TG TI+GQG WW ++R+
Sbjct: 110 RATEKT-KYA----EAENGWLPFISIADAQNVAITG-QGTIDGQGAVWWERWRENIRATG 163
Query: 186 KQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
K+ RP LI + S NV + +TL SPS++V YS +V + G I +P +PNTD
Sbjct: 164 KKGGTDRPRLIYIKSSSNVLVDGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDA 223
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
I+P N RI +NYI DD +A+K+ + G+ I ++ I++
Sbjct: 224 IDPIDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANNIL---KQGRGISI 280
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDY 365
GSE SGG+ +V E+ + G+RIKT G+G VK I R M ++ Y
Sbjct: 281 GSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYY 340
Query: 366 GSHP 369
+ P
Sbjct: 341 KAAP 344
>gi|374311248|ref|YP_005057678.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753258|gb|AEU36648.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 461
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 153/306 (50%), Gaps = 17/306 (5%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
++DFG GDG T ++ A AI A+ G +IVP G +L GS + S TL I K
Sbjct: 37 VSDFGAKGDGTTLDSPAIQRAIDA----ASHSGGTVIVPAGTYLCGSIFVKSGVTLQIEK 92
Query: 119 DALLLASQDESEWPLLP--------PLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNA 170
DA + SQ +++PL+P P+ E + + +
Sbjct: 93 DATIRGSQKITDYPLMPTRVAGIEMTWPAALVNVYEQKNAAITGGGTIDGDGKIFWDSYR 152
Query: 171 TINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQ 230
T+ +P +++ ++ RP L+++ SD++++S L L S W VH YS ++ +
Sbjct: 153 TLRSDYDPKGLRW-AADYDAKRPRLVQIFNSDHIKLSGLMLKRSGFWTVHICYSHDIEVD 211
Query: 231 GLTIRAPID--SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHL 288
G+TIR D P+TDGI+ DS ++ I DD + +K+G D G++V PT+ +
Sbjct: 212 GVTIRNNEDGKGPSTDGIDIDSSKKILVQHADISVNDDALCLKAGRDSDGLRVNRPTEDV 271
Query: 289 IIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN-TQSGVRIKTAVGRGAYVKEIYV 347
+++ + + +A + GSE SGG ++V A IT + G+ K+A RG + ++I +
Sbjct: 272 VLKDSV-VRAGAAGVTFGSETSGGFRNVEAYGITVLKPVPVGILFKSAHTRGGWAEDIRI 330
Query: 348 RRMTMK 353
M +K
Sbjct: 331 HDMDLK 336
>gi|334124103|ref|ZP_08498112.1| exo-poly-alpha-D-galacturonosidase [Enterobacter hormaechei ATCC
49162]
gi|333389102|gb|EGK60268.1| exo-poly-alpha-D-galacturonosidase [Enterobacter hormaechei ATCC
49162]
Length = 430
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 180/397 (45%), Gaps = 57/397 (14%)
Query: 72 NTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEW 131
+T A AI N + +++PPG++LTG+ L S +L++ A L+ SQD +++
Sbjct: 19 STSAIQQAIDNAQQNDV-----IVIPPGRFLTGALFLKSGVSLHLDAGAQLVGSQDLADY 73
Query: 132 PLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQ---- 187
PL+ + G P G +I +V +TG TI+GQG WW ++
Sbjct: 74 PLINTRVA-GIDMRWPAG----IINIIECENVSITG-TGTIDGQGAIWWQRFWGDDERSG 127
Query: 188 ---------------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
++ RP I + S + + + T +S WN+H YS ++ ++G+
Sbjct: 128 MVEDYSARGLRWVVDYDCQRPRNILIFESQTILLRDFTSRESGFWNMHLCYSRHIEVEGV 187
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
I P+TDGI+ DSC R+E + DD + +KSG + + ++IR
Sbjct: 188 QISNSA-GPSTDGIDIDSCEQVRVERCIVSCNDDNICIKSGRGYEAAQKARTARDIVIRG 246
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
C + I LGSE SGGI+ V ED T G RIK+A RG ++++I V+ + +
Sbjct: 247 --CTLNKGSGITLGSETSGGIERVLIEDNAFNGTGVGFRIKSARNRGGFIRDIIVQNLRL 304
Query: 353 KTMK------------YVFWMTGDYGSHPD------PGFDPKA-LPTVTGINYRDMVA-- 391
++ Y + GD P+ G + A L V+G+ ++ A
Sbjct: 305 TDVRFPVLIQLNWFPQYSYGDRGDLADKPEHWRKLAAGVEGDAGLTVVSGLTINNITARR 364
Query: 392 -DN--VTQSAKLDGIRNDPFTGICISNVTIKLTEKPK 425
DN +++ ++G P G+ + + I TE K
Sbjct: 365 SDNKCFSRAFFIEGYPERPVAGLTLEGIVIDATEFGK 401
>gi|150004323|ref|YP_001299067.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149932747|gb|ABR39445.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 594
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 170/378 (44%), Gaps = 40/378 (10%)
Query: 73 TKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWP 132
T N I+ +SK GG +++P GKW + L S+ L++ K A L S ++
Sbjct: 139 TDLVNRTIAEVSK---QGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAELEFSGCAEDY- 194
Query: 133 LLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG-----------------GNATINGQ 175
LP + + G + G ++ I+ ++ +TG A++ +
Sbjct: 195 -LPAVFTRHEGVEIMGP--AAFIYANGENNIAITGEGTIYGPPMDAEIRKRPNGASVVEK 251
Query: 176 GEPWWIKYRKKQFN------VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
PW + ++ ++ RP I + NV I +T+ S WNV P+Y NV+I
Sbjct: 252 DVPWDMPIEQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVII 311
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
+G+T+ + P+ DGI+ +SC N IE + GDDC +K+G E G++VG PT++++
Sbjct: 312 RGITVNS-TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVV 370
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRR 349
IR + I GSE +G IK++ D T++G+R KT RG Y R
Sbjct: 371 IRYSLA-QHGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYER 429
Query: 350 MTMKTMKYVF--------WMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLD 401
+ M + F + G+ + + P V I +D + ++ Q +
Sbjct: 430 LRMINVGKAFTWDLLGSAYYMGELAARYPARKVNRLTPDVKNILIKDFIVESADQFFTAN 489
Query: 402 GIRNDPFTGICISNVTIK 419
GI PF + + N IK
Sbjct: 490 GIPEIPFNQVVVENGEIK 507
>gi|395803704|ref|ZP_10482948.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434258|gb|EJG00208.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 451
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 188/389 (48%), Gaps = 45/389 (11%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKW-LTGSFNLTSHFTLYIH 117
+ G GD + N KAF+ A++ K + G +IVP G + + G + S+ L +
Sbjct: 46 ILKLGAKGDSVSDNKKAFDKAMALCKK---NNGGTIIVPKGIYKINGPIHFVSNVNLKLE 102
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
K A + S + ++ LP + + G +S LI+ N T++ ++G TI+G+G
Sbjct: 103 KGAKIKFSDNPEDY--LPMVLTSWEGTMLY--NYSPLIYANNCTNIAISG-EGTIDGEGG 157
Query: 178 PWWIKYRKKQ-----------FNVT-------------RPYLIEVMFSDNVQISNLTLID 213
W ++ K+ N T RP +I+ + N+ + N+ + +
Sbjct: 158 KTWKTFKAKENEGKNRSRDMNHNNTPLSERKFGEGYFLRPQMIQFLNCKNILVENIRIEN 217
Query: 214 SPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSG 273
SP W +H + S ++ I+G++ ++ + N DGI+P+ + IE+ +GDD VA+K+G
Sbjct: 218 SPFWCLHLLKSESITIRGISYKSL--NHNNDGIDPEYAKDVLIENVTFDNGDDNVAIKAG 275
Query: 274 WDEYG-IKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDI-TAINTQSGVR 331
D G P+Q++IIR C + +GSEMS G+++V E+ TA + G+
Sbjct: 276 RDHEGRANTATPSQNIIIRN--CNFKGLHGVVIGSEMSAGVQNVFVENCKTAGYLKRGIY 333
Query: 332 IKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVA 391
+KT RG Y+K I+VR + + ++ ++T +Y G V+ + + ++
Sbjct: 334 LKTNADRGGYIKNIFVRNIQLDQVEDCLYITANY-----HGEGKGYQSDVSNVYFSNITC 388
Query: 392 DNVTQSA-KLDGIRNDPFTGICISNVTIK 419
+ ++S + G + I + N+ IK
Sbjct: 389 NKASESGIVIQGFADKKIKNISLKNIEIK 417
>gi|325299708|ref|YP_004259625.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319261|gb|ADY37152.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 468
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 192/404 (47%), Gaps = 62/404 (15%)
Query: 59 LTDFGGVGDGKTSNT-KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
+ DFG D + +A N AI ++ +GG ++VP G + TG L S+ L++
Sbjct: 50 IMDFGAKPDTPDAPCHEAINQAIMACNQ---EGGGTVLVPEGTFYTGPITLKSNVNLHVS 106
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG- 176
+ A+L S D+ + P + + G D LI+ T++ +TG I+GQG
Sbjct: 107 EGAVLKFSTDQDLY--FPAVITRWEGLDCYNAH--PLIYAYGETNIALTG-KGVIDGQGS 161
Query: 177 -EPWW------------------IKYRKKQFNVT-----------------RPYLIEVMF 200
E WW + R++ RP LI
Sbjct: 162 NENWWYMCGAPRYGWKEGMRSQKLGSRERLMGYAELKRPIYERVMTPEDGLRPQLINFYS 221
Query: 201 SDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNY 260
+ V I ++TL++SP W +HP++ +++++G+ I PN DG +P+SC N IE+
Sbjct: 222 CNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVKIFNR--GPNGDGCDPESCKNVLIENCR 279
Query: 261 IVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAED 320
+GDDC+A+KSG +E G K +P++++++R + + +GSE+SGG +++ ED
Sbjct: 280 FDTGDDCIAIKSGRNEDGRKWNIPSENIVVRNCE-MKNGHGGVVIGSEISGGYRNLYVED 338
Query: 321 ITAINTQ--SGVRIKTAVGRGAYVKEIYVRRMTM-KTMKYVFWMTGDYGSHP--DPGFDP 375
+ Q +RIKT+ RG ++ ++VR + + + + V + Y + GFD
Sbjct: 339 CVMDSPQLDRVIRIKTSTCRGGVIENVFVRNIKVGQCNEAVLRINLKYEEREQCNRGFD- 397
Query: 376 KALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
PTV ++ +++ + G+ +D +SNV+++
Sbjct: 398 ---PTVRNVHLKNVTCEKSRYGIVAIGLDDDKH----VSNVSLE 434
>gi|288925897|ref|ZP_06419827.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288337321|gb|EFC75677.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 459
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 175/388 (45%), Gaps = 44/388 (11%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLT-GSFNLTSHFTLYIH 117
L G DGKT A A+ K+ GGA++++ G +L G +L L I
Sbjct: 47 LARLGAKTDGKTDARPAMIKALRQARKW---GGARIVLSGGVFLMCGPIHLVDGVCLDIR 103
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
+ A L S + + LP + + G +S +I+G NL DV + G I+G
Sbjct: 104 EGATLRFSPEPRFY--LPTVATSWEG--TFLNNYSPMIYGRNLHDVSIVG-KGLIDGNCA 158
Query: 178 PWWIKYRKKQ------------------------FNVTRPYLIEVMFSDNVQISNLTLID 213
+ +R +Q + RP LI++ NV I + +I+
Sbjct: 159 ATFATWRARQKEGQTLSRRMNHEERPLAERNFGEGHWLRPQLIQLFGCRNVTIEGVKIIN 218
Query: 214 SPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSG 273
SP W +H + S NV+ +GL A + N DGI+P+S N IED +GDD VA+KSG
Sbjct: 219 SPFWCIHLLQSENVICRGLRYDAKL--VNNDGIDPESSRNVLIEDVSFDNGDDNVAIKSG 276
Query: 274 WDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDIT-AINTQSGVRI 332
D G P++++IIRR C A+ +GSEMSGG+++V ED A + G+ I
Sbjct: 277 RDNDGWTHAHPSENIIIRR--CRFKGLHAVVIGSEMSGGVRNVFVEDCDFAGYCKRGLYI 334
Query: 333 KTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSH--PDPGFDPKALPTVTGINYRDMV 390
KT RG YVK IY++ ++ + ++T Y F V G++ R
Sbjct: 335 KTNPDRGGYVKNIYMKDCRFDEVEDLIYVTSMYAGEGLGSRHFSEVEHLLVDGVSCRRAR 394
Query: 391 ADNVTQSAKLDGIRNDPFTGICISNVTI 418
A + L G + P + I V I
Sbjct: 395 AAGIV----LQGTKAKPIRDVTIRRVEI 418
>gi|315570526|gb|ADU33267.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 404
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 183/399 (45%), Gaps = 40/399 (10%)
Query: 42 SYTIEFQALNCRKHSAVLTD---FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPP 98
++ I F A+ ++ + D FG G+ +T A AI+ K A++ G + P
Sbjct: 3 AFIIYFAAILSAISASHIYDVNKFGADSTGRKPSTHAIQKAIN---KAASNNGGTVHFPH 59
Query: 99 GKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGR-----FSS 153
G++L+G+ L S+ L D +L D E+P L + P G+ F+
Sbjct: 60 GQYLSGAIELKSNIILDFADDVVLKFLDDPKEYPPL--------HKKLPNGKIVNLQFTP 111
Query: 154 LIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLID 213
LI + ++ + G NA ++G GE WW + TRP +++ + + + N+T+
Sbjct: 112 LIRAFDHINITIRG-NAVLDGHGETWWKRMPPPS---TRPVFLQIFWVRYLTLENITVKS 167
Query: 214 SPSWNVHPVYSSNVLIQGLTIRAPID----SPNTDGINPDSCTNTRIEDNYIVSGDDCVA 269
SP +NV+ +V I+G+ IR P + PNTDGIN +SC I I +GDDC+A
Sbjct: 168 SPMFNVNLKNCDDVTIRGIKIRNPANYVDPGPNTDGINVNSCRRVHITGVNISTGDDCIA 227
Query: 270 VKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSG 329
+ + K PT+ ++I + +++GS SGG+++V + T G
Sbjct: 228 LDANGKG---KTKTPTEDVLIEDS-HMYAGHGGVSIGSVTSGGLRNVTVRNCIFNGTNRG 283
Query: 330 VRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKAL---------PT 380
+ IK+ GRG V++I+ + M ++ + DPG + P
Sbjct: 284 LFIKSRRGRGGLVEDIHYHNIQMVDLRKEGIAIAAIYNGSDPGLRSRDFYWEPVNETTPF 343
Query: 381 VTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIK 419
+ + ++++ D+V + G+ P + +NV I+
Sbjct: 344 IRNVEFKNIHGDSVLNPIFIVGLPESPIENVTFTNVKIE 382
>gi|325298060|ref|YP_004257977.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324317613|gb|ADY35504.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 462
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 176/395 (44%), Gaps = 56/395 (14%)
Query: 58 VLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKW-LTGSFNLTSHFTLYI 116
++T FG GDGK AF+ A + + A GGA ++VP G++ L G + S+ L +
Sbjct: 49 LITSFGAKGDGKKDCKPAFDKA---MKRAAKSGGAHIVVPAGEYKLNGPIHFVSNVCLEL 105
Query: 117 HKDALL-LASQDESEWPLLPP------LPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGN 169
+ A+L A + E PL+ L +Y S I+G L ++ + G
Sbjct: 106 QEGAVLKFAPEPEYYLPLVKTSWEGTFLQNY-----------SPFIYGYQLENISIIG-K 153
Query: 170 ATINGQGEPWWIKYRKKQ-----------FNVT-------------RPYLIEVMFSDNVQ 205
TI+G + ++ +Q N T RP LI+ N+
Sbjct: 154 GTIDGNAGSTFATWKSQQKKGQQLSRDMNHNETPVEERNFGEGYYLRPQLIQFFACKNIT 213
Query: 206 ISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGD 265
+ + + +SP W +H + S N++ +GL A + N DGI+P+ N IE+ +GD
Sbjct: 214 LEGVFITNSPFWCIHLLKSENIICRGLRYDAKL--VNNDGIDPEFTRNLLIENIEFNNGD 271
Query: 266 DCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDIT-AI 324
D VA+K G D G P++++IIR C + LGSEMS G+++V E+ T
Sbjct: 272 DNVAIKCGRDNDGWTTARPSENIIIRN--CKFKGLHGVVLGSEMSAGVQNVFIENCTYGG 329
Query: 325 NTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGI 384
+ G+ IKT RG +++ IYV ++ +F+ T Y G D V I
Sbjct: 330 YCKRGIYIKTNPDRGGFIRNIYVNNCRFGEVEDLFYATSMYAGE---GMDNTHFTEVHDI 386
Query: 385 NYRDMVADNVTQSA-KLDGIRNDPFTGICISNVTI 418
+D+ + +A L G P + NV +
Sbjct: 387 YVKDVTCQKASAAALVLQGTTVKPIYNVRFENVNV 421
>gi|383115308|ref|ZP_09936066.1| hypothetical protein BSGG_2810 [Bacteroides sp. D2]
gi|313695275|gb|EFS32110.1| hypothetical protein BSGG_2810 [Bacteroides sp. D2]
Length = 496
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 157/319 (49%), Gaps = 37/319 (11%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
FG V D +T+A AI S A GG +I+ PG +L G+ + S L + K
Sbjct: 62 FGAVADSTRLSTEAIQKAIDECS---AAGGGTVILAPGYYLVGALFIKSGVNLQLDKGVT 118
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDV-----VVTGGNATINGQG 176
LLAS D + +P R G +I+ + + +V V G I+ +G
Sbjct: 119 LLASTDINNYPEF---------RSRIAG--IEMIWPSAVLNVIKQKNVAISGEGMIDCRG 167
Query: 177 EPWW-------IKYRKK------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVY 223
+ +W +Y KK ++ R I V S +V + + TL+ + W +Y
Sbjct: 168 KKFWDQYWSMRREYEKKGLRWAVDYDCKRVRGILVERSTDVTLKDFTLMRTGFWACQILY 227
Query: 224 SSNVLIQGLTIRAPIDS--PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKV 281
S I GLTI I P+TDG++ DS TN IE+ I DD + +KSG D G++V
Sbjct: 228 SDYCSINGLTINNNIGGRGPSTDGVDIDSSTNILIENCMIDCNDDNICLKSGRDTDGLRV 287
Query: 282 GMPTQHLIIRRLICISPDSAA-IALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGA 340
PT++++IR C + A I GSE SGGI+++ D+TA T S +R+K+A+ RG
Sbjct: 288 NRPTENVVIRN--CTTRKGAGLITCGSETSGGIRNILGHDLTAQGTWSVLRLKSAMNRGG 345
Query: 341 YVKEIYVRRMTMKTMKYVF 359
++ IY+ R+ +++ V
Sbjct: 346 IIENIYITRVKADSVRNVL 364
>gi|423315483|ref|ZP_17293411.1| hypothetical protein HMPREF1058_04023 [Bacteroides vulgatus
CL09T03C04]
gi|392679286|gb|EIY72672.1| hypothetical protein HMPREF1058_04023 [Bacteroides vulgatus
CL09T03C04]
Length = 1095
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 196/397 (49%), Gaps = 33/397 (8%)
Query: 25 TLGLLSPQVAECRPTKNSYTIEFQAL---------NCRKHSAVLTDFGGVGDGKTSNTKA 75
T G L P A + TI+ +A N R+++ + ++G G+G +
Sbjct: 669 TDGTLQPINATIVNNRTRLTIKLEAWESKFISIGKNNREYN--IKEYGVKGNGYSETA-- 724
Query: 76 FNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLP 135
T +++ A +GG +++P G++L+G+ L I K+A L+++ D +E+P++P
Sbjct: 725 --TLQRIINEAAHNGGGTIVIPAGEYLSGALFFPRGVDLRIEKNAKLISTVDPNEFPVIP 782
Query: 136 PLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQF-NVTRPY 194
+ G ++ R+ + +D V G I+G+G W +K F N RP
Sbjct: 783 ---TRFEGIEK---RWRCAFLNFDHSDGVKVYGEGVIDGKGVEW----KKIPFGNSGRPR 832
Query: 195 LIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNT 254
L+ +IS L +I+ SW +H +Y++ I G+ IRA P++DGI+ DS +
Sbjct: 833 LLCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRALEYIPSSDGIDIDSSNDI 892
Query: 255 RIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIK 314
I I + DDC+++KSG DE G +VG P+++++I + +A+GSE+SGGI+
Sbjct: 893 LITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENC-HFAYGHGGVAMGSEISGGIR 951
Query: 315 DVRAEDITAINTQ-SGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHP--DP 371
+V N S +R K+ RG V+ I +T+K + +F + ++ P P
Sbjct: 952 NVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDITIKGARSIFDINMEWRMVPPLSP 1011
Query: 372 GFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPF 408
P L ++ I+++++ + + + G + PF
Sbjct: 1012 AHYP--LTSLRNIHFKNINGE-AQSAGTMYGFKEAPF 1045
>gi|256424869|ref|YP_003125522.1| glycoside hydrolase [Chitinophaga pinensis DSM 2588]
gi|256039777|gb|ACU63321.1| glycoside hydrolase family 28 [Chitinophaga pinensis DSM 2588]
Length = 521
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 184/413 (44%), Gaps = 46/413 (11%)
Query: 70 TSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDES 129
++ TK AI +SK GG +I+P G W +G L S+ L++ ++A+L +
Sbjct: 68 SAQTKEIQQAIDAVSK---KGGGTVIIPAGNWHSGRIALKSNVNLHLEENAVLEFGGEIR 124
Query: 130 EWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFN 189
++ LP + + G + + I+ ++ VTG + G P RK+
Sbjct: 125 DY--LPVVFTRTEGVEVMS--LGACIYANGQHNIAVTGKGKLV---GPPANCPVRKQVMR 177
Query: 190 --------------------------VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVY 223
V P + + NV + L L ++P WN+ P+Y
Sbjct: 178 QDVIENVVAANKPVSQRIYDGHDGGPVYLPMFVSAVNCKNVYLEGLQLENTPFWNIVPIY 237
Query: 224 SSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGM 283
NV+I+G+T+ + + P+ DGI+ +S N IE + GDDC +K+G E G+++G
Sbjct: 238 CDNVIIRGITVNS-VGIPSGDGIDIESSKNVLIEYCTLNCGDDCFTLKAGRGEDGLRIGK 296
Query: 284 PTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVK 343
PT++++IR + I +GSE + I+++ D+ +T+ G+R KT RG +
Sbjct: 297 PTENVVIRYSLA-RQGHGGITVGSETAAMIRNLYVHDVVFDDTEVGLRFKTRRPRGGGGE 355
Query: 344 EIYVRRMTMKTMKYVF-W-MTGD---YGSHPD--PGFDPKAL-PTVTGINYRDMVADNVT 395
++ R+ M+ F W M G G+ D P L P I +D+V D+
Sbjct: 356 NLHYERIRMRLRLDAFRWDMLGARMYVGALADRLPALPVNKLTPVYRNIYAKDIVVDSAR 415
Query: 396 QSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACEL 448
++DGI P TG + NV T+ + + N +I T A L
Sbjct: 416 ALVRVDGIPESPMTGFHLQNVEAHCTKFLQSIDANVISISNANIYTTDSAVTL 468
>gi|323452523|gb|EGB08397.1| hypothetical protein AURANDRAFT_26417 [Aureococcus anophagefferens]
Length = 460
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/459 (24%), Positives = 200/459 (43%), Gaps = 57/459 (12%)
Query: 28 LLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYA 87
LL P A R + + + +G V DG T + F AI+ A
Sbjct: 7 LLIPAFARSRDSLETILARIDPPTFPPRDFYVHHYGAVPDGSTDALEGFRLAIAA----A 62
Query: 88 ADGGAQLIVPPGK--WLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRD 145
D G +V G L G +L + LY+ K L + D + + LP + + G +
Sbjct: 63 RDAGGGRVVAKGGTFLLRGGLDLYDNVQLYVAKRTTLRWAADRTGF--LPAVLTKFEGTE 120
Query: 146 EPGGRFSSLIFGTNLTDVVVTGG---NATINGQGEPWWIKYRK----------------- 185
+ LI +V V G N+ ++G G+ W +K K
Sbjct: 121 L--FNYHPLIRAFEAENVSVVGADPANSVLDGGGDGWPLKAPKDAKKLRELGASNAPVEA 178
Query: 186 KQFNVTR--PYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNT 243
+QF P ++ V ++N +L+++P W VHPVYS NV ++ L + D PNT
Sbjct: 179 RQFGGKGLPPSFVQPFRCRRVSLANFSLVNAPFWAVHPVYSENVWVRNLRVNTSWDRPNT 238
Query: 244 DGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAI 303
DG++P++C + +E+ I +GDD VA+K+G D G +VG+ ++++++RR + S + I
Sbjct: 239 DGVDPEACKDVLVENCVISAGDDAVALKTGRDADGWRVGVASENIVVRRNVLASRFN-GI 297
Query: 304 ALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMT 362
+GSE+SGG+ +V + + +K+ RG++V+ ++V + + T
Sbjct: 298 CVGSEVSGGVDNVFFLENRIERAFHAIFVKSNSERGSFVRYVHVAHVKAYDLAGDCIHFT 357
Query: 363 GDY----GSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
DY G+ P T ++D++ + + + + P + I +V +
Sbjct: 358 NDYKGVRGARPT---------TFEKFAFKDVICRSAVFAIRATSLAASPIADVTIRDVIV 408
Query: 419 KLTEK---------PKELQWNCTNIQGITSRVTPQACEL 448
K T + P + N N + RV QA +L
Sbjct: 409 KSTMRTTPDHPVSHPVAVA-NVANWEVANLRVNGQAVDL 446
>gi|397691596|ref|YP_006528850.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
gi|395813088|gb|AFN75837.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
Length = 463
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 185/410 (45%), Gaps = 64/410 (15%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKW-LTGSFNLTSHFTLYIH 117
+TD+ + A + AI K GG ++I+P G + G + S+ L++
Sbjct: 50 ITDYADKASLAENIKPALDKAIEECGK---SGGGKIIIPEGVYKCNGPIHFKSNINLHLE 106
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG- 176
K+A++L S + ++ LP + + R +S LI+G + +V +TG +G
Sbjct: 107 KNAVVLFSTNPKDY--LPVV--FTRWEGVECYNYSPLIYGFEVDNVAITG-EGVFDGMAS 161
Query: 177 -EPWW------------------------------IKYRKKQF---NVTRPYLIEVMFSD 202
E WW + K+ F + RP ++ S
Sbjct: 162 DENWWKWKGRKNPKDDETQNNPNSRPRLFEMNNQDVPVDKRVFGEGHYLRPNFVQFYKSK 221
Query: 203 NVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIV 262
N+ I +T +SP W +HPV S N++I+ ++ PN DG +P+SC N IE Y
Sbjct: 222 NILIEGVTFKNSPMWFLHPVLSENIIIR--NVKTIGHGPNNDGCDPESCKNVLIEGCYFD 279
Query: 263 SGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRAED- 320
+GDDC+A+KSG + G ++ P++++IIR C D + +GSE+SGG + V AE+
Sbjct: 280 NGDDCIAIKSGRNNDGRRINAPSENIIIRN--CTMKDGHGGVVIGSEISGGCRFVFAEEC 337
Query: 321 -ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKAL- 378
+ + N +RIK+ RG V+ +YVR + + + + +DPK +
Sbjct: 338 KMDSPNLDRMLRIKSNTVRGGVVEHVYVRNIEVGEVSNAIVRMNMF-------YDPKEIG 390
Query: 379 PTVTGINYRDMVADNVTQ-----SAKLDGIRNDPFTGICISNVTIKLTEK 423
P +R++ +NVT + + G+ P + I N +K
Sbjct: 391 PRDFPPKFRNIRVENVTSRKSDYALEFLGLEESPIENVEIINCDFNGVKK 440
>gi|146311767|ref|YP_001176841.1| glycoside hydrolase family protein [Enterobacter sp. 638]
gi|145318643|gb|ABP60790.1| glycoside hydrolase, family 28 [Enterobacter sp. 638]
Length = 460
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 174/392 (44%), Gaps = 59/392 (15%)
Query: 72 NTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEW 131
NT+A AI + AA GG ++VP G +LT L S+ L + KDA L+AS + + +
Sbjct: 53 NTEAIQKAIDDC---AAAGGGTVLVPKGNFLTNPLFLKSNIQLKLEKDATLVASTEVAAY 109
Query: 132 PLLPPLPSYGRGRDEPGGRFSSLIFG----TNLTDV--VVTGGNATINGQGEPWWIKYRK 185
R + +++ G ++ D V G TI+GQG WW ++R+
Sbjct: 110 ------------RADDKSKYAEAENGWLPFISIADAQNVAIVGEGTIDGQGAVWWERWRE 157
Query: 186 ------KQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPID 239
K+ RP LI + S NV I +TL SPS++V Y+ +V I G I +P
Sbjct: 158 NIRATGKKGGTDRPRLIYITRSHNVLIDGVTLTHSPSFHVVTRYAHDVDINGTRILSPWH 217
Query: 240 SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPD 299
+PNTD I+P N RI +NYI DD +A+K+ + G+ I +
Sbjct: 218 APNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPRFPDGVVDNIYIANNTL---KQ 274
Query: 300 SAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVF 359
I++GSE +GG+ +V E+ T + G+RIK+ G+G VK I R M ++
Sbjct: 275 GRGISIGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVKNIVYRNTKMHNVEVPL 334
Query: 360 WMTGDYGSHP--------------------------DPG--FDPKALPTVTGINYRDMVA 391
+ Y + P DP FD P + I ++ +
Sbjct: 335 VFSAYYKAAPIVEAEVEKLLKEGGFTLGEQIYPPDSDPKQPFDKYKTPHFSNITVENLTS 394
Query: 392 DNVTQSAK-LDGIRNDPFTGICISNVTIKLTE 422
+++A + G P +G +NV I+ +
Sbjct: 395 TGDSKAAAYIIGTPEAPLSGFHFTNVNIEAAQ 426
>gi|116623151|ref|YP_825307.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116226313|gb|ABJ85022.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 436
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 153/307 (49%), Gaps = 27/307 (8%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+TD+G DGKT NT A AI +K G ++ PG +L+G+ L S+ L + +
Sbjct: 20 VTDYGAKADGKTVNTVALQKAIDAAAKA---GKGVVVFAPGVYLSGALFLKSNMELRLDE 76
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+ QD + +PL+ + G + ++ + + V G T++G G+
Sbjct: 77 GVEIRGVQDLAAYPLMQTRVA---GIEM---KWPAALLNVYEQSNVRLSGKGTVDGDGKI 130
Query: 179 WWIKYRKKQ--------------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYS 224
WW Y K + ++ RP LI++ S V + +LTL W VH YS
Sbjct: 131 WWDLYWKMRREEYEPKGLRWAVDYDCRRPRLIQIYKSQGVDLVSLTLKRPGFWTVHICYS 190
Query: 225 SNVLIQGLTIRAPID--SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVG 282
V + GLTIR D P+TDGI+ DS ++ + I DD + +K+G D G++V
Sbjct: 191 ERVTVDGLTIRNNTDGKGPSTDGIDIDSSSDVLVAHCDIDCNDDAICLKAGRDADGLRVN 250
Query: 283 MPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINT-QSGVRIKTAVGRGAY 341
+PT+ + I + + +A + +GSE SGGI+ + + +T ++ +G+ K+A RG
Sbjct: 251 LPTERVRITDNV-VRGGAAGVTIGSETSGGIRHIEVDHLTVMSAVPAGILFKSASTRGGT 309
Query: 342 VKEIYVR 348
+++I +R
Sbjct: 310 IEDIAIR 316
>gi|255523559|ref|ZP_05390527.1| glycoside hydrolase family 28 [Clostridium carboxidivorans P7]
gi|296186479|ref|ZP_06854882.1| polygalacturonase (pectinase) [Clostridium carboxidivorans P7]
gi|255512816|gb|EET89088.1| glycoside hydrolase family 28 [Clostridium carboxidivorans P7]
gi|296048926|gb|EFG88357.1| polygalacturonase (pectinase) [Clostridium carboxidivorans P7]
Length = 532
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 189/429 (44%), Gaps = 42/429 (9%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+TD+G T NT AF AI+ +K GG +++VP G WLTG L S+ LY+
Sbjct: 66 ITDYGAESGSITKNTDAFKKAITECNKV---GGGRVVVPAGTWLTGPIELKSNVNLYLDS 122
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
AL++ S + ++ ++ + +LI G+NL+++ +TG + +NG G
Sbjct: 123 GALVIFSSNPEDYKKTDE-------KNSSSNSYKNLISGSNLSNIAITG-DGVLNGNGAF 174
Query: 179 W------------WIKY----------------RKKQFNVTRPYLIEVMFSDNVQISNLT 210
W W + K+ NV RP L+ + +V + +
Sbjct: 175 WRPVKKEKVTDSIWKSFVSAGGVLDSAGTTVWPNKQVVNVKRPNLLNLSNCKSVLLDGPS 234
Query: 211 LIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAV 270
+SP +N+ S N++++ I + NTDGI+ +C N I ++ + +GDD + +
Sbjct: 235 FENSPQFNIDINSSENLIVRNTKIFNEYWAQNTDGIDISACKNVLIYNDTVNTGDDGICM 294
Query: 271 KSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGV 330
KSG ++++I I ++ +GS GG+K++ + I T SG+
Sbjct: 295 KSGSSSKSNNDEPTLENVVIENCI-VNHAHGGFVVGSNTDGGMKNIYVHNCNYIGTDSGL 353
Query: 331 RIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMV 390
R K+ +G G V++IY+ + MK + + + +P I+ ++
Sbjct: 354 RFKSDIGNGGKVEDIYIDGINMKNIVNDAIVFDTNYEAKNTNNTSNKVPNFQNIHISNVF 413
Query: 391 ADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLP 450
D ++A + G+ P + + N+TIK T N +N+ ++TP +
Sbjct: 414 CDGAQEAANIKGLDAVPVKNLDLKNITIKSTNGFS--AENTSNVNLDNVKITPSQGSIFT 471
Query: 451 KKEPTDCFF 459
K + F
Sbjct: 472 LKNSSGYNF 480
>gi|340347489|ref|ZP_08670597.1| exo-poly-alpha-D-galacturonosidase [Prevotella dentalis DSM 3688]
gi|433653517|ref|YP_007297371.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
gi|339609185|gb|EGQ14060.1| exo-poly-alpha-D-galacturonosidase [Prevotella dentalis DSM 3688]
gi|433304050|gb|AGB29865.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
Length = 472
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 187/421 (44%), Gaps = 61/421 (14%)
Query: 56 SAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLY 115
S L D+G VGDG T NT+AF A+++L+K GG L VP G WLTG L + L+
Sbjct: 50 SVSLKDYGAVGDGLTMNTRAFAKAMADLAKR---GGGHLNVPAGIWLTGPIVLKDNIDLH 106
Query: 116 IHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQ 175
+ ++AL+L S D+ ++ D + + + +++ VTG I+G
Sbjct: 107 LDRNALILFSPDKRDFLT---------ATDGKAAKVVPCLSASKRSNIAVTG-EGIIDGN 156
Query: 176 GEPW------------WIKYRKKQFNVT---------------------------RPYLI 196
GE W W +YR VT R +L+
Sbjct: 157 GEYWRPVKRSKVSDTEWNQYRAMGGTVTAKGDLWYPFGLKHEPDVAEDHEAQERMRQHLV 216
Query: 197 EVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRI 256
V + +TL ++P +++ P ++V++ G+T+ P ++ N D I+ +C N I
Sbjct: 217 RFTDCRRVLVQGVTLRNAPRFHLVPQRCTDVIVDGITVACPWNAQNGDAIDIGNCRNVLI 276
Query: 257 EDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDV 316
+N I +GDD + +K G G G P +++ I+ + +GSE SGG+ ++
Sbjct: 277 VNNTINAGDDGICMKGGAGAKGAADG-PCENINIQDNR-VYHAHGGFVIGSEFSGGMNNI 334
Query: 317 RAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK---YVF---WMTGDYGSHPD 370
T T +G+R K+A GRG ++I++ ++ M +K VF + G+
Sbjct: 335 YVHRNTFAGTDTGLRFKSATGRGGTTRDIHISQIYMTDIKDEAIVFECDYTDNHVGAGAQ 394
Query: 371 PGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWN 430
+ LP T I+ D+V + K G R GI IS T+ T+ ++
Sbjct: 395 KNAETDFLPEFTDIHISDVVCHGARTAIKARG-RQGMIHGIGISRSTLLYTQTAADIGPE 453
Query: 431 C 431
C
Sbjct: 454 C 454
>gi|294776865|ref|ZP_06742328.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294449341|gb|EFG17878.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 594
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 170/378 (44%), Gaps = 40/378 (10%)
Query: 73 TKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWP 132
T N I+ +SK GG +++P GKW + L S+ L++ K A + + ++
Sbjct: 139 TDLVNRTIAEVSK---QGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFAGRAEDY- 194
Query: 133 LLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG-----------------GNATINGQ 175
LP + + G + G ++ I+ ++ +TG A++ +
Sbjct: 195 -LPAVFTRHEGVEIMGP--AAFIYANGENNIAITGEGTIYGPPMDAEIRKRPNGASVVEK 251
Query: 176 GEPWWIKYRKKQFN------VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
PW + ++ ++ RP I + NV I +T+ S WNV P+Y NV+I
Sbjct: 252 DVPWDMPIEQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVII 311
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
+G+T+ + P+ DGI+ +SC N IE + GDDC +K+G E G++VG PT++++
Sbjct: 312 RGITVNS-TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVV 370
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRR 349
IR + I GSE +G IK++ D T++G+R KT RG Y R
Sbjct: 371 IRYSLA-QHGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYER 429
Query: 350 MTMKTMKYVF--------WMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLD 401
+ M + F + G+ + + P V I +D + ++ Q +
Sbjct: 430 LRMINVGKAFTWDLLGSAYYMGELAARYPARKVNRLTPDVKNILIKDFIVESADQFFTAN 489
Query: 402 GIRNDPFTGICISNVTIK 419
GI PF + + N IK
Sbjct: 490 GIPEIPFNQVVVENGEIK 507
>gi|139438280|ref|ZP_01771833.1| Hypothetical protein COLAER_00822 [Collinsella aerofaciens ATCC
25986]
gi|133776477|gb|EBA40297.1| polygalacturonase (pectinase) [Collinsella aerofaciens ATCC 25986]
Length = 531
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/306 (31%), Positives = 142/306 (46%), Gaps = 33/306 (10%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ D G GD + +T AI K DG ++++P G + S L S+ + +
Sbjct: 83 VRDCGAKGDAEHDDTTNIQAAIMACPK---DG--RVLIPAGSYRIKSLFLKSNINIELVD 137
Query: 119 DALLLASQDESEWPLLP--------------PLPSYGRGRDEPGGRFSSLIFGTNLTDVV 164
A+LLA D + +P + GR E + S G + DV
Sbjct: 138 GAVLLARHDRAALAYIPGTVTGNEGAGYAGTDMLPLGRWEGESFSTYCSTFTGLGVHDVC 197
Query: 165 VTGGNATINGQ----GEPWWIKYRKKQF------NVTRPYLIEVMFSDNVQISNLTLIDS 214
+ G A I+GQ + WW K K F V RP +I + NV ++ T+ +S
Sbjct: 198 IYGRGA-IDGQTDFAEDNWWNKDFKNIFRPEEGREVARPRMIFLSECQNVSLAGFTVRNS 256
Query: 215 PSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGW 274
P+WN+HPV +V L+I P +S NTDG +P+SC RI GDDC+A+KSG
Sbjct: 257 PAWNIHPVLCEHVDALCLSIEGPKNSHNTDGFDPESCGFVRILGCQFSVGDDCIAIKSG- 315
Query: 275 DEYGIKVGM-PTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIK 333
+ GI+ + P H ++ + A+ LGSE +GGIKD+ T G+R+K
Sbjct: 316 -KLGIEPELRPATHDVLISHCYMHDGHGAVVLGSEAAGGIKDLTVSKCLFERTDRGLRVK 374
Query: 334 TAVGRG 339
T GRG
Sbjct: 375 TRRGRG 380
>gi|293370067|ref|ZP_06616633.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292634859|gb|EFF53382.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 461
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 175/380 (46%), Gaps = 56/380 (14%)
Query: 58 VLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
++TDFG V G+ NTKA +AI ++ GG +++VP G WLTG + S+ LY+
Sbjct: 54 IITDFGAVNGGRVDNTKAITSAIEACNQ---SGGGRVVVPAGTWLTGPIHFKSNVNLYLE 110
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
++A+L + + S++ LP + + G + +S L++ +V +T G T+ + +
Sbjct: 111 ENAVLNFTDNPSDY--LPAVMTSWEGLE--CYNYSPLLYAFECENVAIT-GKGTLQPKMD 165
Query: 178 PW--WIK------------YRKKQFNV-------------TRPYLIEVMFSDNVQISNLT 210
W W K Y K N+ RP+LI NV +
Sbjct: 166 TWKVWFKRPQSHLEALKELYTKASTNIPVIERQMAIGENHLRPHLIHFNRCKNVLLDGFK 225
Query: 211 LIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAV 270
+ +SP W +H L++ L ++A N DGI+ + N +ED GDD V +
Sbjct: 226 ICESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVI 283
Query: 271 KSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGV 330
K+G ++ ++ P ++++IR I + +GSE+SGGI+++ D TA N+ +
Sbjct: 284 KAGRNQDAWRLNTPCENIVIRNCQ-ILKGHTLLGIGSEISGGIRNIYMHDCTAPNSVMRL 342
Query: 331 -RIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDM 389
+KT RG +++ +Y++ + T + V + T ++D+
Sbjct: 343 FFVKTNHRRGGFIENVYMKNVKAGTAQRVL-----------------EIDTEVLYQWKDL 385
Query: 390 VADNVTQSAKLDGIRNDPFT 409
V + ++DGI D T
Sbjct: 386 VPTYEERITRIDGIYMDKVT 405
>gi|329957312|ref|ZP_08297832.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523025|gb|EGF50128.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 452
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 192/397 (48%), Gaps = 46/397 (11%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKW-LTGSFNLTSHFTLYIH 117
+T++G D + A AI+ + DGG +++P G + + G+ L S+ L+I
Sbjct: 53 VTEYGAKDDTAFDSRPAILKAINQCN---TDGGGTVLIPAGNYFIKGAITLKSNINLHIA 109
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
+ A L S + +++ LP + + G + +S I+ T+V VTG TI+G G
Sbjct: 110 EGARLEFSTEAADY--LPMVLTKWEGTE--CFNYSPFIYAYQCTNVAVTG-KGTIDGNGS 164
Query: 178 PWWIKY---------RKKQFNV---------------TRPYLIEVMFSDNVQISNLTLID 213
+ + R +Q + RP +I+ NV + +L + D
Sbjct: 165 VTFNDWHAIQGPAVDRLRQMGIDSVPVYERVFGEGHYLRPCMIQFYGCKNVLVEDLKIYD 224
Query: 214 SPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSG 273
SP W +HPV+ NV ++ + I + ++ N DG +P+S TN IE GDD +A+KSG
Sbjct: 225 SPFWIIHPVFCDNVTVRNVYIDS--NNYNNDGCDPESSTNVLIEGMDFNVGDDGIAIKSG 282
Query: 274 WDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIK 333
D+ G ++G T+++IIR AI +GSEMSGG++++ ED + ++G+ K
Sbjct: 283 RDQDGWRIGQATENVIIRNC---HFARWAITIGSEMSGGVRNIYIEDCKIDSCRNGIYFK 339
Query: 334 TAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTV-TGINYRDMVAD 392
+ + RG Y + + +RR+ W ++ ++ G+ PT+ I D+ +
Sbjct: 340 SNLDRGGYFENLNMRRIEADV---CLWGVINFRTNYH-GYRGGNHPTLFRNICIEDVTCN 395
Query: 393 NVTQSAKL-DGIRNDPFTGICISNVTIKLTEKPKELQ 428
V A + +G+ I + N+T+K + PK +Q
Sbjct: 396 RVDSVALMANGLPEAKLYDITLRNITVK--KAPKAIQ 430
>gi|423312679|ref|ZP_17290616.1| hypothetical protein HMPREF1058_01228 [Bacteroides vulgatus
CL09T03C04]
gi|392687413|gb|EIY80706.1| hypothetical protein HMPREF1058_01228 [Bacteroides vulgatus
CL09T03C04]
Length = 594
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 170/378 (44%), Gaps = 40/378 (10%)
Query: 73 TKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWP 132
T N I+ +SK GG +++P GKW + L S+ L++ K A + S ++
Sbjct: 139 TDLVNRTIAEVSK---QGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGCAEDY- 194
Query: 133 LLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG-----------------GNATINGQ 175
LP + + G + G ++ I+ ++ +TG A++ +
Sbjct: 195 -LPAVFTRHEGVEIMGP--AAFIYANGENNIAITGEGTIYGPPMDAEIRKRPNGASVVEK 251
Query: 176 GEPWWIKYRKKQFN------VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
PW + ++ ++ RP I + N+ I +T+ S WNV P+Y NV+I
Sbjct: 252 DVPWDMPIEQRIYDGMEGRTFYRPKTISPINCTNILIEGITMERSTLWNVVPIYCENVII 311
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
+G+T+ + P+ DGI+ +SC N IE + GDDC +K+G E G++VG PT++++
Sbjct: 312 RGITVNS-TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVV 370
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRR 349
IR + I GSE +G IK++ D T++G+R KT RG Y R
Sbjct: 371 IRYSLA-QHGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYER 429
Query: 350 MTMKTMKYVF--------WMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLD 401
+ M + F + G+ + + P V I +D + ++ Q +
Sbjct: 430 LRMINVGKAFTWDLLGSAYYMGELAARYPARKVNRLTPDVKNILIKDFIVESADQFFTAN 489
Query: 402 GIRNDPFTGICISNVTIK 419
GI PF + + N IK
Sbjct: 490 GIPEIPFNQVVVENGEIK 507
>gi|413925949|gb|AFW65881.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 213
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 75/109 (68%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFGGVGDG+T NT AF A+ + GG L VP G WL GSFNLTSH TL++ +
Sbjct: 52 IADFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWLAGSFNLTSHMTLFLAR 111
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG 167
A+L A+QD WPL+ PLPSYGRGR+ PG R++S I G L DVV+TG
Sbjct: 112 GAVLKATQDTRGWPLVEPLPSYGRGRELPGPRYASFIHGDGLRDVVITG 160
>gi|150002783|ref|YP_001297527.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|294777287|ref|ZP_06742742.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|149931207|gb|ABR37905.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
gi|294448907|gb|EFG17452.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 1095
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 194/400 (48%), Gaps = 39/400 (9%)
Query: 25 TLGLLSPQVAECRPTKNSYTIEFQAL---------NCRKHSAVLTDFGGVGDGKTSNT-- 73
T G L P A + TI+ +A N R+++ + ++G G+G +
Sbjct: 669 TDGTLQPINATIVNNRTRLTIKLEAWESKLISIGKNNREYN--IKEYGVKGNGYSETATL 726
Query: 74 -KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWP 132
+ N A+ N GG +++P G++L+G+ L I K+A L+++ D +E+P
Sbjct: 727 QRIINEAVHN-------GGGTIVIPAGEYLSGALFFPRGVDLRIEKNAKLISTVDPNEFP 779
Query: 133 LLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQF-NVT 191
++P + G ++ R+ + +D V G I+G+G W +K F N
Sbjct: 780 VIP---TRFEGIEK---RWRCAFLNFDHSDGVKVYGEGVIDGKGVEW----KKIPFGNSG 829
Query: 192 RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSC 251
RP L+ +IS L +I+ SW +H +Y++ I G+ IRA P++DGI+ DS
Sbjct: 830 RPRLLCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRALEYIPSSDGIDIDSS 889
Query: 252 TNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSG 311
+ I I + DDC+++KSG DE G +VG P+++++I + +A+GSE+SG
Sbjct: 890 NDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENC-HFAYGHGGVAMGSEISG 948
Query: 312 GIKDVRAEDITAINTQ-SGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHP- 369
GI++V N S +R K+ RG V+ I +T+K + +F + ++ P
Sbjct: 949 GIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDITIKGARSIFDINMEWRMVPP 1008
Query: 370 -DPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPF 408
P P L + I+++++ + + + G + PF
Sbjct: 1009 LSPAHYP--LTCLRNIHFKNINGE-AQSAGTMYGFKEAPF 1045
>gi|307129970|ref|YP_003881986.1| Exo-poly-alpha-D-galacturonosidase [Dickeya dadantii 3937]
gi|306527499|gb|ADM97429.1| Exo-poly-alpha-D-galacturonosidase [Dickeya dadantii 3937]
Length = 467
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 167/352 (47%), Gaps = 19/352 (5%)
Query: 72 NTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEW 131
NT++F AI AA GG ++VP G +L L S+ L++ K+A L+AS E+ +
Sbjct: 60 NTESFQKAIDEC---AAAGGGTVLVPAGNYLVEPLFLKSNVRLHLEKNATLVASTGENAY 116
Query: 132 PLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRK------ 185
S E G + I + +V +TG TI+GQG WW ++R
Sbjct: 117 R---ATDSTRYAEAENG--WLPFISIADAQNVAITG-EGTIDGQGAVWWERWRAAIRATG 170
Query: 186 KQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
K+ RP LI V S+ V I +TL +SPS++V Y+ +V + G I AP +PNTD
Sbjct: 171 KKGGTDRPRLIYVTRSNRVLIDGVTLTNSPSFHVVMRYAHDVTVNGTHIIAPWHAPNTDA 230
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
I+P N RI +N I DD +A+K+ + G+ I ++ I++
Sbjct: 231 IDPIDSQNIRITNNVIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANNVL---KQGRGISI 287
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDY 365
GSE SGG+ +V E+ + G+RIK+ G+G VK + R M ++ +G Y
Sbjct: 288 GSETSGGVNNVLVENNRFEGSMYGIRIKSLRGKGGEVKNVTYRHTRMLDVEVPLVFSGYY 347
Query: 366 GSHPDPGFDPKALPTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNV 416
+ P + L G + + T+ A+ D ++ F+ + I ++
Sbjct: 348 QAAPIVQAEVDKLLQAGGFTLGEQIYPPDTEPAQPFDKVKTPHFSQVTIVDL 399
>gi|295095844|emb|CBK84934.1| Endopolygalacturonase [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 430
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 177/375 (47%), Gaps = 52/375 (13%)
Query: 94 LIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSS 153
+++P G++LTG+ L S +L + A L+ SQD +++PL+ + G P G
Sbjct: 36 IVIPQGRFLTGALFLKSGVSLRLDAGAQLVGSQDLADYPLINTRVA-GIDMRWPAG---- 90
Query: 154 LIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQ-------------------FNVTRPY 194
+I + +V +TG TI+GQG WW ++ ++ RP
Sbjct: 91 IINIIDCENVSITG-TGTIDGQGVIWWQRFWGDDERSGMVGDYSARGLRWVVDYDCQRPR 149
Query: 195 LIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNT 254
I V S ++ + + T +S WN+H YS + ++G+ I P+TDGI+ DSC
Sbjct: 150 NILVFESQSILLRDFTSRESGFWNMHLCYSRRITVEGVQISNSA-GPSTDGIDIDSCEQV 208
Query: 255 RIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIK 314
R+E + DD + +KSG + + ++IR C + I LGSE SGGI+
Sbjct: 209 RVERCIVSCNDDNICIKSGRGREAAQKARTARDIVIRG--CTLNKGSGITLGSETSGGIE 266
Query: 315 DVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-----VFWM----TGDY 365
V ED T G RIK+A RG ++++I V+ + + +++ + W GD
Sbjct: 267 RVLIEDNAFNGTGVGFRIKSARNRGGFIRDITVQNLHLTDVRFPVLIQLNWFPQYSYGDR 326
Query: 366 GSHPD---------PGFDPKA-LPTVTGINYRDMVA---DN--VTQSAKLDGIRNDPFTG 410
G+ D G + +A L V+G+ ++M A DN +++ ++G P TG
Sbjct: 327 GNLSDKPEHWRKLAEGVEGEAGLTAVSGLTIKNMSAHRSDNKYFSRAFFIEGYPERPVTG 386
Query: 411 ICISNVTIKLTEKPK 425
+ + + I +E K
Sbjct: 387 LTLDGILIDASEFGK 401
>gi|20451636|emb|CAC83614.1| putative polygalacturonase [Erwinia chrysanthemi]
Length = 457
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 168/352 (47%), Gaps = 19/352 (5%)
Query: 72 NTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEW 131
NT++F AI + AA GG ++VP G +L L S+ L++ K+A L+AS E+ +
Sbjct: 50 NTESFQKAID---ECAAAGGGTVLVPAGNYLVEPLFLKSNVRLHLEKNATLVASTGENAY 106
Query: 132 PLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRK------ 185
S E G + I + +V +TG TI+GQG WW ++R
Sbjct: 107 R---ATDSTRYAEAENG--WLPFISIADAQNVAITG-EGTIDGQGAVWWERWRAAIRATG 160
Query: 186 KQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
K+ RP LI V S+ V I +TL +SPS++V Y+ +V + G I AP +PNTD
Sbjct: 161 KKGGTDRPRLIYVTRSNRVLIDGVTLTNSPSFHVVMRYAHDVTVNGTHIIAPWHAPNTDA 220
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
I+P N RI +N I DD +A+K+ + G+ I ++ I++
Sbjct: 221 IDPIDSQNIRITNNVIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANNVL---KQGRGISI 277
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDY 365
GSE SGG+ +V E+ + G+RIK+ G+G VK + R M ++ +G Y
Sbjct: 278 GSETSGGVNNVLVENNRFEGSMYGIRIKSLRGKGGEVKNVTYRHTRMLDVEVPLVFSGYY 337
Query: 366 GSHPDPGFDPKALPTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGICISNV 416
+ P + L G + + T+ A+ D ++ F+ + I ++
Sbjct: 338 QAAPIVQAEVDKLLQAGGFTLGEQIYPPDTEPAQPFDKVKTPHFSQVTIVDL 389
>gi|431797010|ref|YP_007223914.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787775|gb|AGA77904.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 455
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 163/326 (50%), Gaps = 47/326 (14%)
Query: 58 VLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
V+TDFG D + + ++A TAIS GG ++++P G+W TG +L S+ +++
Sbjct: 53 VITDFGAEEDDQQATSQAIVTAIS---AAVEAGGGRIVIPAGEWPTGKIHLKSNINIHLE 109
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
+ A LL S+D ++ LP + + G + +S LI+ + ++ +TG + +
Sbjct: 110 EGATLLFSEDPKDY--LPAVKTTWEGME--CFNYSPLIYAFDCENIAITG-KGELKAKMN 164
Query: 178 PWWIKYR---------KKQFNVT------------------RPYLIEVMFSDNVQISNLT 210
W + + K+ +N+ RP I+ + V + +
Sbjct: 165 TWKVWFSRPKAHMESLKRLYNLAATDVPVEERNFVNDSSNFRPQFIQFNRCEKVLLEGVK 224
Query: 211 LIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAV 270
+ +SP W +HP S +V+I+ + + A N DG++P+ N IE+ GDD +AV
Sbjct: 225 ITNSPFWVIHPFMSKDVVIRDVQVFA--HGHNNDGVDPEMSQNMLIENCIFDQGDDAIAV 282
Query: 271 KSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGV 330
KSG ++ ++ MPT++++IR + + +A+GSE+SGG+++V E+ Q G
Sbjct: 283 KSGRNQDAWRLNMPTKNIVIRNSL-VKNGHQLLAIGSELSGGVENVYMEN---CEVQEGA 338
Query: 331 R------IKTAVGRGAYVKEIYVRRM 350
+ +KT RG YV+ ++++ +
Sbjct: 339 KLNHLLYVKTNERRGGYVRNVHMKNI 364
>gi|265755035|ref|ZP_06089949.1| beta-xylosidase [Bacteroides sp. 3_1_33FAA]
gi|263234646|gb|EEZ20225.1| beta-xylosidase [Bacteroides sp. 3_1_33FAA]
Length = 955
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 151/292 (51%), Gaps = 33/292 (11%)
Query: 90 GGAQLIVPPG-KWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPG 148
GG +I+ G +L G+ L S L++ KDA LL S + LP + + G + G
Sbjct: 569 GGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKADD--FLPEVWTRWEGTELYG 626
Query: 149 GRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFN------------------- 189
S +I+ + T++ +TG TI+ QG + + + + +
Sbjct: 627 --HSPMIYAKHATNIAITG-QGTIDAQGGREFASWSQIEVSDRNRLRKMGEKLIPVTERI 683
Query: 190 -----VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTD 244
+ RP I+ M + + +T+ +SP W +HPVY NV+++ +TI + PN D
Sbjct: 684 FGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDS--HYPNND 741
Query: 245 GINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIA 304
G +P+S +N IE+ +GDD +A+K+G D G ++G P+++++IR + S + +
Sbjct: 742 GCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQS-ECNGLC 800
Query: 305 LGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK 356
+GSEMSGG++++ ++I ++ + K+ RG Y++ I V +T++ K
Sbjct: 801 IGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSK 852
>gi|345513230|ref|ZP_08792752.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|345456240|gb|EEO47229.2| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 955
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 151/292 (51%), Gaps = 33/292 (11%)
Query: 90 GGAQLIVPPG-KWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPG 148
GG +I+ G +L G+ L S L++ KDA LL S + LP + + G + G
Sbjct: 569 GGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKADD--FLPEVWTRWEGTELYG 626
Query: 149 GRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFN------------------- 189
S +I+ + T++ +TG TI+ QG + + + + +
Sbjct: 627 --HSPMIYAKHATNIAITG-QGTIDAQGGREFASWSQIEVSDRNRLRKMGEKLIPVTERI 683
Query: 190 -----VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTD 244
+ RP I+ M + + +T+ +SP W +HPVY NV+++ +TI + PN D
Sbjct: 684 FGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDS--HYPNND 741
Query: 245 GINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIA 304
G +P+S +N IE+ +GDD +A+K+G D G ++G P+++++IR + S + +
Sbjct: 742 GCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQS-ECNGLC 800
Query: 305 LGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK 356
+GSEMSGG++++ ++I ++ + K+ RG Y++ I V +T++ K
Sbjct: 801 IGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSK 852
>gi|423232721|ref|ZP_17219121.1| hypothetical protein HMPREF1063_04941 [Bacteroides dorei
CL02T00C15]
gi|423247413|ref|ZP_17228463.1| hypothetical protein HMPREF1064_04669 [Bacteroides dorei
CL02T12C06]
gi|392623160|gb|EIY17265.1| hypothetical protein HMPREF1063_04941 [Bacteroides dorei
CL02T00C15]
gi|392632553|gb|EIY26512.1| hypothetical protein HMPREF1064_04669 [Bacteroides dorei
CL02T12C06]
Length = 955
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 151/292 (51%), Gaps = 33/292 (11%)
Query: 90 GGAQLIVPPG-KWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPG 148
GG +I+ G +L G+ L S L++ KDA LL S + LP + + G + G
Sbjct: 569 GGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKADD--FLPEVWTRWEGTELYG 626
Query: 149 GRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFN------------------- 189
S +I+ + T++ +TG TI+ QG + + + + +
Sbjct: 627 --HSPMIYAKHATNIAITG-QGTIDAQGGREFASWSQIEVSDRNRLRKMGEKLIPVTERI 683
Query: 190 -----VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTD 244
+ RP I+ M + + +T+ +SP W +HPVY NV+++ +TI + PN D
Sbjct: 684 FGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDS--HYPNND 741
Query: 245 GINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIA 304
G +P+S +N IE+ +GDD +A+K+G D G ++G P+++++IR + S + +
Sbjct: 742 GCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQS-ECNGLC 800
Query: 305 LGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK 356
+GSEMSGG++++ ++I ++ + K+ RG Y++ I V +T++ K
Sbjct: 801 IGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSK 852
>gi|423106873|ref|ZP_17094568.1| hypothetical protein HMPREF9687_00119 [Klebsiella oxytoca 10-5243]
gi|376388999|gb|EHT01691.1| hypothetical protein HMPREF9687_00119 [Klebsiella oxytoca 10-5243]
Length = 460
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 181/409 (44%), Gaps = 63/409 (15%)
Query: 72 NTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEW 131
NT A AI + AA GG ++VP G +LT L ++ L + KDA L+AS + + +
Sbjct: 53 NTDAIQKAIDDC---AAAGGGTVLVPKGNFLTNPLFLKNNIQLKLEKDATLVASTEVAAY 109
Query: 132 PLLPPLPSYGRGRDEPGGRFSSLIFG----TNLTDV--VVTGGNATINGQGEPWWIKYRK 185
RG D+ R++ G ++ D V G TI+GQG WW ++R+
Sbjct: 110 ----------RGDDKT--RYAEAENGWLPFISIADAQNVAIVGEGTIDGQGAVWWERWRE 157
Query: 186 ------KQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPID 239
K+ RP LI + + NV I +TL SPS++V Y+ +V I G I +P
Sbjct: 158 NIRATGKKGGTDRPRLIYITRASNVLIDGVTLTHSPSFHVVTRYAHDVDINGTRILSPWH 217
Query: 240 SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPD 299
+PNTD I+P N RI +NYI DD +A+K+ + G+ I +
Sbjct: 218 APNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPRFPDGVVDNIYIANNTL---KQ 274
Query: 300 SAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVF 359
I++GSE +GG+ +V E+ T + G+RIK+ G+G VK I M ++
Sbjct: 275 GRGISIGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVKNIVYSNTRMHNVEVPL 334
Query: 360 WMTGDYGSHP--------------------------DPG--FDPKALPTVTGINYRDMVA 391
+ Y + P DP FD P + I ++ +
Sbjct: 335 VFSAYYKAAPIVQAEVDKLLQAGGFTLGEQIYPPDSDPKQPFDKYKTPHFSNITVENLTS 394
Query: 392 DNVTQSAK-LDGIRNDPFTGICISNVTIK----LTEKPKELQWNCTNIQ 435
+++A + G P +G SNV I+ L + EL+ N+Q
Sbjct: 395 TGDSKAAAYIIGTPEAPLSGFHFSNVNIEADRGLRIRNAELESKGLNLQ 443
>gi|237709360|ref|ZP_04539841.1| beta-xylosidase [Bacteroides sp. 9_1_42FAA]
gi|229456745|gb|EEO62466.1| beta-xylosidase [Bacteroides sp. 9_1_42FAA]
Length = 938
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 151/292 (51%), Gaps = 33/292 (11%)
Query: 90 GGAQLIVPPG-KWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPG 148
GG +I+ G +L G+ L S L++ KDA LL S + LP + + G + G
Sbjct: 552 GGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKADD--FLPEVWTRWEGTELYG 609
Query: 149 GRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFN------------------- 189
S +I+ + T++ +TG TI+ QG + + + + +
Sbjct: 610 --HSPMIYAKHATNIAITG-QGTIDAQGGREFASWSQIEVSDRNRLRKMGEKLIPVTERI 666
Query: 190 -----VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTD 244
+ RP I+ M + + +T+ +SP W +HPVY NV+++ +TI + PN D
Sbjct: 667 FGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDS--HYPNND 724
Query: 245 GINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIA 304
G +P+S +N IE+ +GDD +A+K+G D G ++G P+++++IR + S + +
Sbjct: 725 GCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQS-ECNGLC 783
Query: 305 LGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK 356
+GSEMSGG++++ ++I ++ + K+ RG Y++ I V +T++ K
Sbjct: 784 IGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSK 835
>gi|423242205|ref|ZP_17223315.1| hypothetical protein HMPREF1065_03938 [Bacteroides dorei
CL03T12C01]
gi|392639949|gb|EIY33757.1| hypothetical protein HMPREF1065_03938 [Bacteroides dorei
CL03T12C01]
Length = 955
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 151/292 (51%), Gaps = 33/292 (11%)
Query: 90 GGAQLIVPPG-KWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPG 148
GG +I+ G +L G+ L S L++ KDA LL S + LP + + G + G
Sbjct: 569 GGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKADD--FLPEVWTRWEGTELYG 626
Query: 149 GRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFN------------------- 189
S +I+ + T++ +TG TI+ QG + + + + +
Sbjct: 627 --HSPMIYAKHATNIAITG-QGTIDAQGGREFASWSQIEVSDRNRLRKMGEKLIPVTERI 683
Query: 190 -----VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTD 244
+ RP I+ M + + +T+ +SP W +HPVY NV+++ +TI + PN D
Sbjct: 684 FGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDS--HYPNND 741
Query: 245 GINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIA 304
G +P+S +N IE+ +GDD +A+K+G D G ++G P+++++IR + S + +
Sbjct: 742 GCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQS-ECNGLC 800
Query: 305 LGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK 356
+GSEMSGG++++ ++I ++ + K+ RG Y++ I V +T++ K
Sbjct: 801 IGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSK 852
>gi|299148459|ref|ZP_07041521.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|298513220|gb|EFI37107.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
Length = 461
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 175/381 (45%), Gaps = 58/381 (15%)
Query: 58 VLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
++TDFG V G+ NTKA +AI ++ GG +++VP G WLTG + S+ LY+
Sbjct: 54 IITDFGAVNGGRVDNTKAITSAIEACNQ---SGGGRVVVPAGTWLTGPIHFKSNVNLYLE 110
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
++A+L + + S++ LP + + G + +S L++ +V +T G T+ + +
Sbjct: 111 ENAVLNFTDNPSDY--LPAVMTSWEGLE--CYNYSPLLYAFECENVAIT-GKGTLQPKMD 165
Query: 178 PW--WIK------------YRKKQFNV-------------TRPYLIEVMFSDNVQISNLT 210
W W K Y K N+ RP+LI NV +
Sbjct: 166 TWKVWFKRPQSHLEALKELYTKASTNIPVIERQMAIGENHLRPHLIHFNRCKNVLLDGFK 225
Query: 211 LIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAV 270
+ +SP W +H L++ L ++A N DGI+ + N +ED GDD V +
Sbjct: 226 IRESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVI 283
Query: 271 KSGWDEYGIKVGMPTQHLIIRRLIC-ISPDSAAIALGSEMSGGIKDVRAEDITAINT-QS 328
K+G ++ ++ P ++++IR C I + +GSE+SGGI+++ D TA N+
Sbjct: 284 KAGRNQDAWRLNTPCENIVIRN--CQILKGHTLLGIGSEISGGIRNIYMHDCTAPNSVMR 341
Query: 329 GVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRD 388
+KT RG +++ +Y++ + T + V + T ++D
Sbjct: 342 LFFVKTNHRRGGFIENVYMKNVKAGTAQRVL-----------------EIDTEVLYQWKD 384
Query: 389 MVADNVTQSAKLDGIRNDPFT 409
+V + ++DGI D T
Sbjct: 385 LVPTYEERITRIDGIYMDKVT 405
>gi|160886940|ref|ZP_02067943.1| hypothetical protein BACOVA_04954 [Bacteroides ovatus ATCC 8483]
gi|237721224|ref|ZP_04551705.1| pectate lyase [Bacteroides sp. 2_2_4]
gi|423288954|ref|ZP_17267805.1| hypothetical protein HMPREF1069_02848 [Bacteroides ovatus
CL02T12C04]
gi|423294898|ref|ZP_17273025.1| hypothetical protein HMPREF1070_01690 [Bacteroides ovatus
CL03T12C18]
gi|156107351|gb|EDO09096.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|229449020|gb|EEO54811.1| pectate lyase [Bacteroides sp. 2_2_4]
gi|392668718|gb|EIY62212.1| hypothetical protein HMPREF1069_02848 [Bacteroides ovatus
CL02T12C04]
gi|392676089|gb|EIY69530.1| hypothetical protein HMPREF1070_01690 [Bacteroides ovatus
CL03T12C18]
Length = 461
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 176/381 (46%), Gaps = 58/381 (15%)
Query: 58 VLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
++TDFG V G+ NTKA +AI ++ GG +++VP G WLTG + S+ LY+
Sbjct: 54 IITDFGAVNGGRVDNTKAITSAIEACNQ---SGGGRVVVPAGTWLTGPIHFKSNVNLYLE 110
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
++A+L + + S++ LP + + G + +S L++ +V +T G T+ + +
Sbjct: 111 ENAVLNFTDNPSDY--LPAVMTSWEGLE--CYNYSPLLYAFECENVAIT-GKGTLQPKMD 165
Query: 178 PW--WIK------------YRKKQFNV-------------TRPYLIEVMFSDNVQISNLT 210
W W K Y K N+ RP+LI NV +
Sbjct: 166 TWKVWFKRPQPHLEALKELYTKASTNIPVIERQMAIGENHLRPHLIHFNRCKNVLLDGFK 225
Query: 211 LIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAV 270
+ +SP W +H L++ L ++A N DGI+ + N +ED GDD V +
Sbjct: 226 IRESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVI 283
Query: 271 KSGWDEYGIKVGMPTQHLIIRRLIC-ISPDSAAIALGSEMSGGIKDVRAEDITAINTQSG 329
K+G ++ ++ P ++++IR C I + +GSE+SGGI+++ D TA N+
Sbjct: 284 KAGRNQDAWRLNTPCENIVIRN--CQILKGHTLLGIGSEISGGIRNIYMHDCTAPNSVMR 341
Query: 330 V-RIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRD 388
+ +KT RG +++ +Y++ + T + V + T ++D
Sbjct: 342 LFFVKTNHRRGGFIENVYMKNVKAGTAQRVL-----------------EIDTEVLYQWKD 384
Query: 389 MVADNVTQSAKLDGIRNDPFT 409
+V + ++DGI D T
Sbjct: 385 LVPTYEERITRIDGIYMDKVT 405
>gi|146301983|ref|YP_001196574.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156401|gb|ABQ07255.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 448
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 190/386 (49%), Gaps = 46/386 (11%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKW-LTGSFNLTSHFTLYIHKDA 120
G GD T+N F+ A++ K GG +IVP G + + G + S+ L I K A
Sbjct: 47 LGAKGDSITNNKAVFDKAMALCKK---KGGGTIIVPKGIYKINGPIHFVSNVNLKIEKGA 103
Query: 121 LLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW 180
+ S + ++PL+ L S+ +S LI+ + T++ +TG I+G+G W
Sbjct: 104 KIKFSDNPQDYPLV--LTSW---EGTMLYNYSPLIYAVDCTNIAITGV-GIIDGEGGKIW 157
Query: 181 IKYRKKQ------------FNV------------TRPYLIEVMFSDNVQISNLTLIDSPS 216
++ K+ NV RP +I+ + N+ + N+ + +SP
Sbjct: 158 KSFKAKEGAGKNLSREMNHNNVPVSDRKFGEGYFLRPQMIQFLNCKNILVENVRIENSPF 217
Query: 217 WNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDE 276
W +H + S N+ ++G++ ++ + N DGI+P+ + IE+ +GDD VA+K+G D
Sbjct: 218 WCLHLLKSQNITVRGISYKSL--NYNNDGIDPEYAKDVLIENVTFDNGDDNVAIKAGRDH 275
Query: 277 YG-IKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDI-TAINTQSGVRIKT 334
G P+++++IR C + +GSEMS G+++V E+ TA + G+ +KT
Sbjct: 276 EGRANTASPSENIVIRN--CNFKGLHGVVIGSEMSAGVQNVFVENCKTAGYLKRGIYLKT 333
Query: 335 AVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNV 394
RG Y+K ++V+ + + ++ ++T +Y + G+ ++ I++ ++ +
Sbjct: 334 NADRGGYIKNVFVQNLQLDEVEDCLYITANYHGEGE-GYQ----SDISNIHFSNITCNRA 388
Query: 395 TQSA-KLDGIRNDPFTGICISNVTIK 419
++S + G + I ++N+ IK
Sbjct: 389 SESGIVIQGFSDKKIRSISLNNIDIK 414
>gi|189462203|ref|ZP_03010988.1| hypothetical protein BACCOP_02885 [Bacteroides coprocola DSM 17136]
gi|189431106|gb|EDV00091.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 460
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 182/406 (44%), Gaps = 53/406 (13%)
Query: 88 ADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEP 147
A GG I +L G +L S L + + A L S S++ LP + + G +
Sbjct: 73 AGGGTVKISEGHYFLNGPLHLKSDVNLNLAEGAYLQFSGKSSDF--LPVVLTRWEGTELY 130
Query: 148 GGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFN------------------ 189
G S +I+ + ++ +TG TI+ QG + + K + N
Sbjct: 131 G--HSPMIYAYHANNIAITG-KGTIDAQGGLEFAAWSKIEANDRDRLREMGDKLVPVHER 187
Query: 190 ------VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNT 243
V RP I+ V I +T+ DSP W +HPVY NV+++G+TI + PN
Sbjct: 188 IFGEGTVLRPSCIQPYGCSRVLIEGITVKDSPFWTIHPVYCDNVIVRGVTIDSHF--PNN 245
Query: 244 DGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAI 303
DG +P+S TN IE+ +GDD +A+KSG D G +G P+++++IR I + +
Sbjct: 246 DGCDPESTTNVLIENCTFRTGDDAIAIKSGRDTDGRYIGRPSRNIVIRNCI-FHSECNGL 304
Query: 304 ALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK--YVFWM 361
+GSEMSGG DV +I ++ + K+ RG Y++ + V +T++ K + +
Sbjct: 305 CIGSEMSGGASDVYMNNIEIGTVKNAIYFKSNRDRGGYIRNVVVDSITVERAKGAILRFE 364
Query: 362 TGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAK------LDGIRNDPFTGICISN 415
T +G G + +AL Y D NV+ +DG I I N
Sbjct: 365 TNYFGFR---GGNHQAL-------YEDFQISNVSAGTADNYAIFMDGNEEYKIRNINIDN 414
Query: 416 VTIKLTEKPKEL-QWNCTNI--QGITSRVTPQACELLPKKEPTDCF 458
+K + P L C N+ + + P++ + P+K D +
Sbjct: 415 FHVKEAQYPYYLMNTECINLTQSSVNGKNIPESPKESPQKISLDVY 460
>gi|212693830|ref|ZP_03301958.1| hypothetical protein BACDOR_03351 [Bacteroides dorei DSM 17855]
gi|212663719|gb|EEB24293.1| glycosyl hydrolase, family 43 [Bacteroides dorei DSM 17855]
Length = 957
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 151/292 (51%), Gaps = 33/292 (11%)
Query: 90 GGAQLIVPPG-KWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPG 148
GG +I+ G +L G+ L S L++ KDA LL S + LP + + G + G
Sbjct: 571 GGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKADD--FLPEVWTRWEGTELYG 628
Query: 149 GRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFN------------------- 189
S +I+ + T++ +TG TI+ QG + + + + +
Sbjct: 629 --HSPMIYAKHATNIAITG-QGTIDAQGGREFASWSQIEVSDRNRLRKMGEKLIPVTERI 685
Query: 190 -----VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTD 244
+ RP I+ M + + +T+ +SP W +HPVY NV+++ +TI + PN D
Sbjct: 686 FGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDS--HYPNND 743
Query: 245 GINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIA 304
G +P+S +N IE+ +GDD +A+K+G D G ++G P+++++IR + S + +
Sbjct: 744 GCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQS-ECNGLC 802
Query: 305 LGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK 356
+GSEMSGG++++ ++I ++ + K+ RG Y++ I V +T++ K
Sbjct: 803 IGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSK 854
>gi|421083085|ref|ZP_15543964.1| Glycoside hydrolase family 28 [Pectobacterium wasabiae CFBP 3304]
gi|401702311|gb|EJS92555.1| Glycoside hydrolase family 28 [Pectobacterium wasabiae CFBP 3304]
Length = 460
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 192/440 (43%), Gaps = 60/440 (13%)
Query: 16 VIKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGD--GKTSNT 73
+ ++++ +TLG+ + + + +++F C +T +G G NT
Sbjct: 6 ALSLMASCITLGI------QAGTAQAASSVKFPDKTCD-----VTQYGAEGHRLQIALNT 54
Query: 74 KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPL 133
+AF AI + AA GG + VP G +L L S+ L + KDA ++AS + + +
Sbjct: 55 EAFQKAIDDC---AAAGGGTVHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTEVAAYRA 111
Query: 134 LPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRK------KQ 187
Y E + I + +V +TG TI+GQG WW ++R+ K+
Sbjct: 112 TEKT-KYA----EAENGWLPFISIADAQNVAITG-QGTIDGQGAVWWERWRENIRATGKK 165
Query: 188 FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGIN 247
RP LI + S NV + +TL SPS++V YS +V + G I +P +PNTD I+
Sbjct: 166 GGTDRPRLIYIKSSSNVLVDGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDAID 225
Query: 248 PDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGS 307
P N RI +NYI DD +A+K+ + G+ I ++ I++GS
Sbjct: 226 PIDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANNIL---KQGRGISIGS 282
Query: 308 EMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGS 367
E SGG+ +V E+ + G+RIKT G+G VK I R M ++ Y +
Sbjct: 283 ETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKA 342
Query: 368 HP--------------------------DPG--FDPKALPTVTGINYRDMVADNVTQSAK 399
P DP FD P + + ++ + T++A
Sbjct: 343 APIVQAEVDKMLAEGGFTMGEQIYPSDTDPEQPFDQHKTPHFSNVTIENLESTGKTKAAA 402
Query: 400 -LDGIRNDPFTGICISNVTI 418
+ G+ P +G NV I
Sbjct: 403 YIIGVPEAPLSGFHFDNVRI 422
>gi|390959335|ref|YP_006423092.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
gi|390414253|gb|AFL89757.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
Length = 468
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 170/349 (48%), Gaps = 36/349 (10%)
Query: 55 HSAVLT--DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
H+A LT +FG GDG +TKA A+ AA + + PG + GS + S
Sbjct: 16 HAATLTANNFGAKGDGVADDTKAIQKALD----AAAGKHDTVTLKPGTYRIGSIFVKSGS 71
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
L + K L Q +PL+P + G P ++L+ TDV +TG TI
Sbjct: 72 RLDLPKGVTLRGIQSLDAYPLMPTRIA-GIEMTWP----AALVNVYKQTDVQITG-EGTI 125
Query: 173 NGQGEPWWIKY---RKK----------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNV 219
+G G WW Y R K ++ RP LI+V S NV++ L S W V
Sbjct: 126 DGDGSYWWKSYWDLRAKYEPKGLRWASDYDAKRPRLIQVFDSSNVKLDGPMLTRSGFWTV 185
Query: 220 HPVYSSNVLIQGLTIR--APIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEY 277
H YS +V I +TIR P+TDGI+ DS + ++ I DD + +K+G D
Sbjct: 186 HICYSHDVTIDHVTIRNNEGGKGPSTDGIDIDSSHDVLVQHADIDVNDDALCLKAGRDSD 245
Query: 278 GIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAI-NTQSGVRIKTAV 336
G++V PT ++++R + I +AA+ GSE SGG +++ A ++TA+ +GV IK+A
Sbjct: 246 GLRVNRPTYNVVLRDSL-IRTGAAAVTFGSETSGGFRNIEAYNLTALRGVTNGVLIKSAK 304
Query: 337 GRGAYVKEIYVRRMTMKTMKYVFWMTGD------YGSHPDPGFDPKALP 379
RG + + + V + + +K +T + Y S P G DPK +P
Sbjct: 305 VRGGFGENLRVHDLHLDGVKTPIKVTLNWNPAYSYTSLP-AGTDPKTVP 352
>gi|319643150|ref|ZP_07997780.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520559|ref|ZP_08799946.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254835079|gb|EET15388.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317385228|gb|EFV66177.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 1095
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 170/330 (51%), Gaps = 18/330 (5%)
Query: 83 LSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGR 142
+++ A +GG +++P G++L+G+ L I K+A L+++ D +E+P++P +
Sbjct: 730 INEAAHNGGGTIVIPAGEYLSGALFFPRGVDLRIEKNAKLISTVDPNEFPVIP---TRFE 786
Query: 143 GRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQF-NVTRPYLIEVMFS 201
G ++ R+ + +D V G I+G+G W +K F N RP L+
Sbjct: 787 GIEK---RWRCAFLNFDHSDGVKVYGEGVIDGKGVEW----KKIPFGNSGRPRLLCFTDC 839
Query: 202 DNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYI 261
+IS L +I+ SW +H +Y++ I G+ IRA P++DGI+ DS + I I
Sbjct: 840 PGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRI 899
Query: 262 VSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDI 321
+ DDC+++KSG DE G +VG P+++++I + +A+GSE+SGGI++V
Sbjct: 900 EAHDDCISIKSGRDEDGRRVGRPSENILIENC-HFAYGHGGVAMGSEISGGIRNVTIRSC 958
Query: 322 TAINTQ-SGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHP--DPGFDPKAL 378
N S +R K+ RG V+ I +T+K + +F + ++ P P P L
Sbjct: 959 LMDNENWSPLRFKSQPSRGGTVENITFEDITIKGARSIFDINMEWRMVPPLSPAHYP--L 1016
Query: 379 PTVTGINYRDMVADNVTQSAKLDGIRNDPF 408
+ I+++++ + + + G + PF
Sbjct: 1017 TCLRNIHFKNINGE-AQSAGTMYGFKETPF 1045
>gi|182416708|ref|ZP_02948108.1| glycoside Hydrolase Family 28 [Clostridium butyricum 5521]
gi|237667049|ref|ZP_04527033.1| glycoside Hydrolase Family 28 [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182379433|gb|EDT76927.1| glycoside Hydrolase Family 28 [Clostridium butyricum 5521]
gi|237655397|gb|EEP52953.1| glycoside Hydrolase Family 28 [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 511
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 184/398 (46%), Gaps = 66/398 (16%)
Query: 89 DGGAQLIVP------PGKWLTGSFNLTSHFTLYIHKDALL--LASQDESEWPLLPPLPSY 140
+GG ++I+P P + +GS L S+ LYI ++A++ L ++ +PL+ Y
Sbjct: 100 NGGGKVIIPGGTKEEPKIYYSGSITLKSNVELYIEENAIIKFLRNKSNRFYPLV-----Y 154
Query: 141 GRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE-----PWWIKY---------RKK 186
R FS I+ ++ ++G ++G + PW Y R++
Sbjct: 155 TRWEGVEMMNFSPFIYSYEAENISISG-KGVLDGCADEFNWMPWKFGYFNEEDQQIQRER 213
Query: 187 QFNV-------------------TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNV 227
FN+ RP I+ S N+ I ++T+++SP W V+PV N+
Sbjct: 214 LFNLGQENADVRTRRIFNDEISTIRPPFIQPYKSKNILIKDITILNSPFWEVNPVLCENI 273
Query: 228 LIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQH 287
I +T+ + + N DG++P+SC + IED + +GDDC+A+KSG + G +G+P+Q+
Sbjct: 274 KIDSITVDSHL--YNNDGVDPESCKDMIIEDCHFTTGDDCIAIKSGRNNEGRNIGVPSQN 331
Query: 288 LIIRRLICISPDSAAIALGSEMSGGIKDVRAED--ITAINTQSGVRIKTAVGRGAYVKEI 345
+IIR I +GSE+SGG+ D+ A D + +R KT RG ++ I
Sbjct: 332 IIIRNN-KFEDGHGGITIGSEISGGVNDIFAHDNYFDSSELDYPIRFKTNAERGGKLENI 390
Query: 346 YVRRMTMKTMKYV------FWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAK 399
YV+ + K F+ G G++ P L + + + A+N +
Sbjct: 391 YVKNSVVNKSKIAVIHADFFYEEGTNGNYM-PILRNITLSNIKTVEGGSIDANN---ALF 446
Query: 400 LDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGI 437
L G ++ P I I +V + + LQ NI+GI
Sbjct: 447 LKGFKDAPIENILIEDVYLNGVKGDAVLQ----NIKGI 480
>gi|160884725|ref|ZP_02065728.1| hypothetical protein BACOVA_02714 [Bacteroides ovatus ATCC 8483]
gi|156109760|gb|EDO11505.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 527
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 177/405 (43%), Gaps = 56/405 (13%)
Query: 73 TKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWP 132
T N I +S+ GG +I+P GKW +G L S+ L+ LA E E+P
Sbjct: 66 TSIVNQTIEEISQ---KGGGTVIIPKGKWKSGRIVLKSNVNLH-------LAEGSEIEFP 115
Query: 133 -----LLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYR--- 184
LP + + G + G S I+ ++ +TG I G I+ R
Sbjct: 116 GNAEDYLPAVFTRHEGIEIMGS--GSFIYANGEDNIAITG-KGVIYGPSLDAEIRQRPNG 172
Query: 185 ---------------KKQFN------VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVY 223
K+ F+ +P I + NV I +T+ S WNV P+Y
Sbjct: 173 NTVVEKDILNNAPVEKRVFDGMDGRGFYKPKTISPINCTNVLIEGITMERSTFWNVCPIY 232
Query: 224 SSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGM 283
NV+I+G+T+ + I P+ DGI+ +SC N IE + GDDC +K+G E G++VG
Sbjct: 233 CENVIIRGITVNS-IGIPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGK 291
Query: 284 PTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVK 343
PT++++IR + + GSE +GG+K+V D TQ G+R KT R V
Sbjct: 292 PTENVVIRYSLA-QQGHGGVTCGSETAGGVKNVYVHDCVFDGTQIGIRFKTRRNRAGGVN 350
Query: 344 EIYVRRMTMKTMKYVF-W-------MTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVT 395
+ ++ M + F W G+ P K PT+ I+ ++ + ++
Sbjct: 351 DALYEKIRMINVGEAFKWDLLGSKRYVGELAERYPPRAVNKLTPTIKDIHIKNFIVESAE 410
Query: 396 QSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSR 440
+ ++GI P + + I N I K+L ++ G T R
Sbjct: 411 KILSVNGIPEIPCSNVLIENGKI----ISKKLIGALNDVDGFTFR 451
>gi|281419728|ref|ZP_06250727.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM
18205]
gi|281406257|gb|EFB36937.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM
18205]
Length = 873
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 209/461 (45%), Gaps = 88/461 (19%)
Query: 18 KILSTLLTLGLLSPQVA------ECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTS 71
K TLL LL P A + + +I+ + V++ +G + +
Sbjct: 3 KFFKTLLVALLLIPACAWADGWNDAEYQRIEQSIQLPNIKQATKKYVISAYGAKQNASAA 62
Query: 72 -NTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESE 130
N KA N I+ +SK GG +++P G W TG+ + S L + + A+L + +
Sbjct: 63 QNQKAINKLIALVSK---KGGGTIVIPKGTWRTGAIEMKSFVELNLEEGAVLQFAFEPKL 119
Query: 131 WPLLPPLPSYGRGRDEPGG----RFSSLIFGTNLTDVVVTGGNATINGQG--EPWW---- 180
+PL+ R G +S I+ ++D+ +TG TI+G G + WW
Sbjct: 120 YPLV---------RTAWEGLACWNYSPCIYAYKVSDIAITG-KGTIDGGGNNDTWWQWNG 169
Query: 181 ------------------------------IKYRKKQFNV---TRPYLIEVMFSDNVQIS 207
+ + +++F + RP L+ + S+ + I
Sbjct: 170 NPYFGYKEGVTKEHQKMGSRARLQKMAENGVPFDERKFGMGQGLRPQLVNFVRSERILIK 229
Query: 208 NLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDC 267
++ +I+SP W +HP+ ++ + G+T+ + PN DG +P++C N I++ +GDDC
Sbjct: 230 DVKMINSPFWVMHPLLCKDITVDGVTVWN--EGPNGDGCDPEACENVLIQNCIFHTGDDC 287
Query: 268 VAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRAE--DITAI 324
+A+KSG + G P++++IIR C D + +GSE+SGG ++V AE ++ +
Sbjct: 288 IAIKSGRNNDGRLWNKPSKNIIIRN--CRMEDGHGGVVIGSEISGGCENVYAENCEMDSP 345
Query: 325 NTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-YVFWMTGDYGSHPD--PGFDPK----A 377
+ + +RIKT RG ++ I++R++T+ K V + DY GF+P +
Sbjct: 346 HLERILRIKTNNCRGGLIQNIHMRKVTVGQCKEAVLKINLDYEPREACYRGFEPTVRNVS 405
Query: 378 LPTVT-----------GINYRDMVADNVTQSAKLDGIRNDP 407
+ VT G N + V D ++ K DG+ P
Sbjct: 406 MEDVTCQKSNYGVLIIGGNKVENVYDIHVKNCKFDGVIKQP 446
>gi|423301906|ref|ZP_17279929.1| hypothetical protein HMPREF1057_03070 [Bacteroides finegoldii
CL09T03C10]
gi|408470997|gb|EKJ89529.1| hypothetical protein HMPREF1057_03070 [Bacteroides finegoldii
CL09T03C10]
Length = 489
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 167/336 (49%), Gaps = 31/336 (9%)
Query: 60 TDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKD 119
TDFG D +T+ +AI + GG +I+P G + G+ + S L++ K
Sbjct: 58 TDFGLKSDTSVLSTRFVQSAIDACHE---KGGGTVIIPSGVYRIGALFIKSGVNLHLSKG 114
Query: 120 ALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPW 179
L+AS+D ++P PS G + + S + + G I+ +G+ +
Sbjct: 115 TTLIASEDIRDYP---EFPSRIAGIEMT---WPSAVLNIMDAENAALTGEGFIDCRGKVF 168
Query: 180 WIKY--------RKK-----QFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSN 226
W KY +KK ++ R I V S ++ + + TL+ + W +YS +
Sbjct: 169 WDKYWEMRKEYEKKKLRWIVDYDCKRVRGILVSNSKHITLKDFTLVRTGFWACQILYSDH 228
Query: 227 VLIQGLTIRAPI--DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMP 284
+ G+TI + P+TDGI+ DS TN +E+ + DD + +K+G D G++V P
Sbjct: 229 CSVDGVTINNNVGGHGPSTDGIDIDSSTNILVENCEVDCNDDNICIKAGRDADGLRVNRP 288
Query: 285 TQHLIIRRLICISPDSAA-IALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVK 343
T++++IR C + A + GSE SG I++V A D+ A T + +R+K+++ RG V+
Sbjct: 289 TENVVIRN--CTARKGAGLVTCGSETSGSIRNVLAYDLKAYGTGAALRLKSSMNRGGTVE 346
Query: 344 EIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALP 379
IY+ R+ ++KYV + G + +P + ALP
Sbjct: 347 NIYMTRVKADSVKYVLAV----GLNWNPKYSYSALP 378
>gi|82524094|emb|CAJ19131.1| putative endopolygalacturonase [unidentified microorganism]
Length = 448
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 174/387 (44%), Gaps = 41/387 (10%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPG-KWLTGSFNLTSHFTLYIH 117
+ G G+G T AF A K GGA+++VP G ++ G +L S+ L I
Sbjct: 37 IQKMGAKGNGTTDCLPAFKKA---FKKAVRKGGARIVVPAGVYYIKGPLHLVSNVCLEIQ 93
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
+ A L + + + LP + + G +S I+G L DV + G TI+G
Sbjct: 94 EGATLKFAPEPEYY--LPAVKTSWEGTFLQ--NYSPFIYGYQLHDVSIIG-KGTIDGNAM 148
Query: 178 PWWIKYRKKQF------------------------NVTRPYLIEVMFSDNVQISNLTLID 213
+ +R Q + RP+LI++ + + I ++ + +
Sbjct: 149 TTFATWRSLQKPAQQRSRDMNHAGTPVSERNFGEGDYLRPHLIQLYGCERITIEDVFITN 208
Query: 214 SPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSG 273
SP W +H + S N +++ + A + N DGI+P+ N IED + +GDD VA+KSG
Sbjct: 209 SPFWCIHLLQSENAILRSIRFDAKL--VNNDGIDPEMSRNVLIEDVHFNNGDDNVAIKSG 266
Query: 274 WDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDIT-AINTQSGVRI 332
D G P++++IIR C A+ LGSEMS GI++V E+ A + G+ I
Sbjct: 267 RDHDGRGTACPSENIIIRN--CHFKGLHAVVLGSEMSAGIQNVYVENCDYAGYCKRGLYI 324
Query: 333 KTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYG--SHPDPGFDPKALPTVTGINYRDMV 390
KT RG +++ I + ++ +F++T YG + F TV I R
Sbjct: 325 KTNPDRGGFIRNISFKNCEFDEVEDLFYITSMYGGEGQDNTFFTDIENITVENIQCRKAR 384
Query: 391 ADN-VTQSAKLDGIRNDPFTGICISNV 416
A V Q K +RN F I I V
Sbjct: 385 AGGLVLQGTKAKPLRNIQFRNITIGEV 411
>gi|329962597|ref|ZP_08300545.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529628|gb|EGF56526.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 454
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 193/397 (48%), Gaps = 46/397 (11%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKW-LTGSFNLTSHFTLYIH 117
+TD+G D + A AI+ ++ +GG +++P G + + G+ L S+ L+I
Sbjct: 51 VTDYGAKNDTAFDSRPAILEAINKCNQ---NGGGTVLIPAGNYFIKGAITLKSNVNLHIV 107
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG- 176
+ A L S S++ LP + + G + ++ I+ T+V +TG T++G G
Sbjct: 108 EGARLEFSTAASDY--LPMVLTKWEGTE--CFNYTPFIYAYQCTNVALTG-KGTLDGNGA 162
Query: 177 ---EPWWIKY-----RKKQFNV---------------TRPYLIEVMFSDNVQISNLTLID 213
W K R +Q + RP +I+ NV + ++ + D
Sbjct: 163 VTFNGWHAKQGPAVDRLRQMGIDSIPVYERVFGEGYYLRPCMIQFYGCKNVLVEDVRIFD 222
Query: 214 SPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSG 273
SP W +HPV+ +NV ++ + I + ++ N DG +P+SCTN IE+ GDD +A+KSG
Sbjct: 223 SPFWIIHPVFCNNVTVRNIYIDS--NNYNNDGCDPESCTNVLIENMDFNVGDDGIAIKSG 280
Query: 274 WDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIK 333
D+ G ++G T+++IIR AI +GSE SGG+++V ED + ++G+ K
Sbjct: 281 RDQDGWRIGQATENVIIRNC---HFARWAITIGSETSGGVRNVYIEDCKIDSCRNGIYFK 337
Query: 334 TAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTV-TGINYRDMVAD 392
+ + RG Y + + +RR+ W ++ ++ G+ PT+ I D+ +
Sbjct: 338 SNLDRGGYFENLNMRRIEADV---CLWGVVNFRTNYH-GYRGGNHPTLFRNICIEDINCN 393
Query: 393 NVTQSAKL-DGIRNDPFTGICISNVTIKLTEKPKELQ 428
V A + +G+ I + N+ +K + PK +Q
Sbjct: 394 RVDSVALMANGLPEAKLYNITLRNIKVK--KAPKAIQ 428
>gi|50120129|ref|YP_049296.1| polygalacturonase [Pectobacterium atrosepticum SCRI1043]
gi|49610655|emb|CAG74100.1| putative polygalacturonase [Pectobacterium atrosepticum SCRI1043]
Length = 460
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 169/361 (46%), Gaps = 31/361 (8%)
Query: 17 IKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGD--GKTSNTK 74
+ ++++ +TLG+ + + + +++F C +T +G G NT+
Sbjct: 7 LSLMASCITLGI------QAGTAQAASSVKFPDKTCD-----VTQYGAEGHRLQIALNTE 55
Query: 75 AFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLL 134
AF AI + AA GG + VP G +L L S+ L + KDA ++AS + + +
Sbjct: 56 AFQKAIDDC---AAAGGGTVHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTEVAAYRAT 112
Query: 135 PPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRK------KQF 188
Y E + I + +V +TG TI+GQG WW ++R+ K+
Sbjct: 113 EKT-KYA----EAENGWLPFISIADAQNVAITG-QGTIDGQGAVWWERWRENIRATGKKG 166
Query: 189 NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINP 248
RP LI + S NV + +TL SPS++V YS +V + G I +P +PNTD I+P
Sbjct: 167 GTDRPRLIYIKSSSNVLVDGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDP 226
Query: 249 DSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSE 308
N RI +NYI DD +A+K+ + G+ I ++ I++GSE
Sbjct: 227 IDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANNIL---KQGRGISIGSE 283
Query: 309 MSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSH 368
SGG+ +V E+ + G+RIKT G+G VK I R M ++ Y +
Sbjct: 284 TSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAA 343
Query: 369 P 369
P
Sbjct: 344 P 344
>gi|302672206|ref|YP_003832166.1| polygalacturonase Pgl28B [Butyrivibrio proteoclasticus B316]
gi|302396679|gb|ADL35584.1| polygalacturonase Pgl28B [Butyrivibrio proteoclasticus B316]
Length = 519
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 161/335 (48%), Gaps = 43/335 (12%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
RK + + +GDGKT NT A A+ + D + + P G +LTG+ N+ S+
Sbjct: 94 RKIDVTTSPYNALGDGKTLNTAALQKALDD-----CDENSIVFFPKGTYLTGALNVHSNS 148
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLI--------FGTNLTDVV 164
+Y+ + ALL ++D +++ LP + S G + + SL+ G N +V+
Sbjct: 149 EIYLEEGALLQGTEDPADY--LPKIHSRFEGYEMEC--YRSLLNLGELDHSSGFNCENVI 204
Query: 165 VTGGNATING-----------QGEPWW---------IKYRKKQFNVT---RPYLIEVMFS 201
+ G + + G +GE IK +K + R LI +
Sbjct: 205 IRGEGSIMGGGAALAKSIARIEGERLRDYIASLGDKIKEYEKPETIASRFRGRLINMSNC 264
Query: 202 DNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYI 261
N+ I LTL +PSWN+H +YS ++ T+++ N DG +PDS TN+ +
Sbjct: 265 QNIWIHGLTLGFAPSWNIHFIYSDQIVTDHCTLKSE-GVWNGDGWDPDSSTNSTLYACDF 323
Query: 262 VSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDI 321
+ DD VA+KSG + G + PT+H IR ++ + +GSEMSGG++DVR D
Sbjct: 324 YTEDDSVAIKSGKNPEGNVINRPTKH--IRVFDSVTHFGHGLCIGSEMSGGVEDVRLWDC 381
Query: 322 TAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK 356
T SG+ IK RG YV+ I VR +T ++
Sbjct: 382 QMGPTWSGIEIKATKKRGGYVRNILVRDITASHIQ 416
>gi|322434842|ref|YP_004217054.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321162569|gb|ADW68274.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 478
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 168/345 (48%), Gaps = 33/345 (9%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG GDG T +T A AI AA ++ PG +L+GS + S TL + K
Sbjct: 29 VNDFGAKGDGSTMDTAAIQKAIDA----AAKSHGTVVFAPGTYLSGSIFVKSGVTLQLDK 84
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+L SQ ++P++P + G P ++L+ D V+TG TI+G G+
Sbjct: 85 GVTILGSQRIEDYPVMPTRVA-GIEMSWP----AALVNVYEQKDAVITG-EGTIDGDGKI 138
Query: 179 WWIKY---RK----------KQFNVTRPYLIEVMFSDNVQISN-LTLIDSPSWNVHPVYS 224
+W Y RK ++ RP L++V S +++I L L S W +H YS
Sbjct: 139 YWDSYWTLRKGYEPRGLRWASDYDARRPRLVQVFNSSHIKIGGGLLLRRSGFWTLHICYS 198
Query: 225 SNVLIQGLTIR--APIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVG 282
++V GLTIR P+TDGI+ DS + + I DD + +K+G D G++V
Sbjct: 199 TDVTADGLTIRNNEGGRGPSTDGIDIDSSKHIVVAHADIAVNDDALCLKAGRDSDGLRVN 258
Query: 283 MPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAI-NTQSGVRIKTAVGRGAY 341
PT+ +++R I +A + GSE SGG +++ A ++ + G+ K+A RG +
Sbjct: 259 RPTEDVVLRDS-TIRDGAAGVTFGSETSGGFRNIEAYNLKVFGHVPVGILFKSAHTRGGF 317
Query: 342 VKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINY 386
+ + + +T+ + V +T ++ +P + +P T NY
Sbjct: 318 AENVRIHDLTLTDIPVVLKVTMNW----NPSYSYATIP-ATETNY 357
>gi|423241479|ref|ZP_17222592.1| hypothetical protein HMPREF1065_03215 [Bacteroides dorei
CL03T12C01]
gi|392641372|gb|EIY35149.1| hypothetical protein HMPREF1065_03215 [Bacteroides dorei
CL03T12C01]
Length = 463
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 195/427 (45%), Gaps = 62/427 (14%)
Query: 23 LLTLGLLSPQVAECRPTKNSYTIEFQALNCR-------KHSAVLTDFGGVGDGKTSNTKA 75
L++L L+ ++ C + S + +N + + S V+TD+ V D T T A
Sbjct: 9 LVSLLFLTTAISSCDKKEVSPWNQMTEVNNQIVPPVFPERSFVITDYHDVKD--TLYTNA 66
Query: 76 FNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLP 135
N AI+ S+ GG ++I+P G++LT L S+ L++ +L + D + L+
Sbjct: 67 INRAITICSE---QGGGKVIIPDGEFLTAPIRLKSNVNLHLSDSTVLKFTTDPFFFDLVQ 123
Query: 136 PLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP--WW------------- 180
R S LI+ T++ +T GN ++GQ + W+
Sbjct: 124 T-----RIEGIDCYNISPLIYAYGETNIAIT-GNGVMDGQADSSNWFSENRIRGIVQEDG 177
Query: 181 ----------------IKYRKKQF---NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHP 221
I ++++ F N RP I + N+ + TL SP W +HP
Sbjct: 178 KKINEKTLLYEMKEDSIPFKERVFMRENGIRPQFINLYKCKNILLEGFTLNRSPFWLIHP 237
Query: 222 VYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKV 281
+ S N+ ++ + +++ N DG +P+SC N IED +GDDC+A+KSG DE G
Sbjct: 238 LLSENITVRKVKMQS--HGYNNDGCDPESCRNVLIEDCDFDTGDDCIAIKSGRDEDGRYW 295
Query: 282 GMPTQHLIIRRLICISPD-SAAIALGSEMSGGIKDVRAEDITAINTQSG--VRIKTAVGR 338
+P++++I+R C D A +A+GSE++GG ++V E+ T + + +RIK+ R
Sbjct: 296 NIPSENIIVRH--CRMKDGHAGVAIGSEVTGGCRNVWVENCTMDSPELDRIIRIKSNAMR 353
Query: 339 GAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSA 398
G V+ I++R + + K H D G LP I+ ++ +
Sbjct: 354 GGEVENIFIRNIRVGECKESILGFELKYWHVDDG---PYLPYFHNIHLENITSKKSQYVL 410
Query: 399 KLDGIRN 405
LDG +
Sbjct: 411 HLDGFED 417
>gi|345513952|ref|ZP_08793467.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|423230893|ref|ZP_17217297.1| hypothetical protein HMPREF1063_03117 [Bacteroides dorei
CL02T00C15]
gi|423244604|ref|ZP_17225679.1| hypothetical protein HMPREF1064_01885 [Bacteroides dorei
CL02T12C06]
gi|229435766|gb|EEO45843.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|392630013|gb|EIY24015.1| hypothetical protein HMPREF1063_03117 [Bacteroides dorei
CL02T00C15]
gi|392641453|gb|EIY35229.1| hypothetical protein HMPREF1064_01885 [Bacteroides dorei
CL02T12C06]
Length = 463
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 195/427 (45%), Gaps = 62/427 (14%)
Query: 23 LLTLGLLSPQVAECRPTKNSYTIEFQALNCR-------KHSAVLTDFGGVGDGKTSNTKA 75
L++L L+ ++ C + S + +N + + S V+TD+ V D T T A
Sbjct: 9 LVSLLFLTTAISSCDKKEVSPWNQMTEVNNQIVPPVFPERSFVITDYHDVKD--TLYTNA 66
Query: 76 FNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLP 135
N AI+ S+ GG ++I+P G++LT L S+ L++ +L + D + L+
Sbjct: 67 INRAITICSE---QGGGKVIIPDGEFLTAPIRLKSNVNLHLSDSTVLKFTTDPFFFDLVQ 123
Query: 136 PLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP--WW------------- 180
R S LI+ T++ +T GN ++GQ + W+
Sbjct: 124 T-----RIEGIDCYNISPLIYAYGETNIAIT-GNGVMDGQADSSNWFSENRIRGIVQEDG 177
Query: 181 ----------------IKYRKKQF---NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHP 221
I ++++ F N RP I + N+ + TL SP W +HP
Sbjct: 178 KKINEKTLLYEMKEDSIPFKERVFMRENGIRPQFINLYKCKNILLEGFTLNRSPFWLIHP 237
Query: 222 VYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKV 281
+ S N+ ++ + +++ N DG +P+SC N IED +GDDC+A+KSG DE G
Sbjct: 238 LLSENITVRKVKMQS--HGYNNDGCDPESCRNVLIEDCDFDTGDDCIAIKSGRDEDGRYW 295
Query: 282 GMPTQHLIIRRLICISPD-SAAIALGSEMSGGIKDVRAEDITAINTQSG--VRIKTAVGR 338
+P++++I+R C D A +A+GSE++GG ++V E+ T + + +RIK+ R
Sbjct: 296 NIPSENIIVRH--CRMKDGHAGVAIGSEVTGGCRNVWVENCTMDSPELDRIIRIKSNAMR 353
Query: 339 GAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSA 398
G V+ I++R + + K H D G LP I+ ++ +
Sbjct: 354 GGEVENIFIRNIRVGECKESILGFELKYWHVDDG---PYLPYFHNIHLENITSKKSQYVL 410
Query: 399 KLDGIRN 405
LDG +
Sbjct: 411 HLDGFED 417
>gi|261822466|ref|YP_003260572.1| glycoside hydrolase family protein [Pectobacterium wasabiae WPP163]
gi|261606479|gb|ACX88965.1| glycoside hydrolase family 28 [Pectobacterium wasabiae WPP163]
gi|385872775|gb|AFI91295.1| Glycoside hydrolase family 28 [Pectobacterium sp. SCC3193]
Length = 460
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 170/362 (46%), Gaps = 31/362 (8%)
Query: 16 VIKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGD--GKTSNT 73
+ ++++ +TLG+ + + + +++F C +T +G G NT
Sbjct: 6 ALSLMASCITLGI------QAGTAQAASSVKFPDKTCD-----VTQYGAEGHRLQIALNT 54
Query: 74 KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPL 133
+AF AI + AA GG + VP G +L L S+ L + KDA ++AS + + +
Sbjct: 55 EAFQKAIDDC---AAAGGGTVHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTEVAAYRA 111
Query: 134 LPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRK------KQ 187
Y E + I + +V +TG TI+GQG WW ++R+ K+
Sbjct: 112 TEKT-KYA----EAENGWLPFISIADAQNVAITG-EGTIDGQGAVWWERWRENIRATGKK 165
Query: 188 FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGIN 247
RP LI + S NV + ++TL SPS+++ YS +V + G I +P +PNTD I+
Sbjct: 166 GGTDRPRLIYIKSSSNVLVDSVTLTHSPSFHIVMRYSHDVDVNGTRILSPWHAPNTDAID 225
Query: 248 PDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGS 307
P N RI +NYI DD +A+K+ + G+ I ++ I++GS
Sbjct: 226 PIDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANNIL---KQGRGISIGS 282
Query: 308 EMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGS 367
E SGG+ +V E+ + G+RIKT G+G VK I R M ++ Y +
Sbjct: 283 ETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKA 342
Query: 368 HP 369
P
Sbjct: 343 AP 344
>gi|374313032|ref|YP_005059462.1| Polygalacturonase [Granulicella mallensis MP5ACTX8]
gi|358755042|gb|AEU38432.1| Polygalacturonase [Granulicella mallensis MP5ACTX8]
Length = 420
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 177/370 (47%), Gaps = 29/370 (7%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
FG GDG T +T A AI + Y G +L G +L+G +L S+ TL I + A
Sbjct: 30 FGAKGDGTTKDTVAIQKAIDTCAGYKKGGVVKL--SGGIFLSGPISLKSNITLDIAEGAT 87
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW- 180
LL S D ++P + ++ R +P L+ N ++ +TGG TI+G G WW
Sbjct: 88 LLGSPDREDYPKV----TFAR---QP--TVQPLVGSVNAENITITGG-GTIDGNGHIWWE 137
Query: 181 IKYRKKQFNVT-----RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIR 235
+ K+ V RP + S ++++ +T+ ++ W + P Y+ +++ + L I
Sbjct: 138 YVHAVKEAGVLGNDHPRPMGLVFDHSKHIRVEGITVQNAGFWQIVPYYADDLVFRNLKIL 197
Query: 236 APIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGW-DEYGIKVGMPTQHLIIRRLI 294
AP SPNTD I+P S +N I+ + GDD VA+KSG + G P++++ I
Sbjct: 198 AP-HSPNTDAIDPFSSSNIVIDHVFSSVGDDNVAIKSGAINSPGPDA--PSKNITITD-- 252
Query: 295 CISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKT 354
C + +++GSE++GG+++V AE I T G+RIK RG V I + + M
Sbjct: 253 CTFENGHGLSIGSEIAGGVQNVHAERIHFKGTDQGIRIKANRDRGNDVSNISFKDIDMVD 312
Query: 355 MKYVFWMTGDYGSHPDPGFDP-----KALPTVTGINYRDMVADNVTQSAKLDGIRNDPFT 409
+K +T Y G P + P I ++ A + + G+ P
Sbjct: 313 VKTAILITEYYPKAAPDGEVPSMPMGRLTPRFHDIAIENVHATGSGSAGTIVGLPESPVE 372
Query: 410 GICISNVTIK 419
G+ + NV ++
Sbjct: 373 GLSLKNVDLQ 382
>gi|357450135|ref|XP_003595344.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355484392|gb|AES65595.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 297
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 99/175 (56%), Gaps = 34/175 (19%)
Query: 80 ISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPS 139
+ NL+ + GGAQL VPPG WLT FNLTSH + + + + DE WPL+P LPS
Sbjct: 139 VFNLTDFDG-GGAQLNVPPGLWLTAPFNLTSHMSKCMKTYSKI---NDEKYWPLMPALPS 194
Query: 140 YGRGRDEPGGRFSSLIFGTNLTDVVVTG-----GNATINGQGEPWWIKYRKKQFNVTRPY 194
YG GR+ PG R+SSLI G NLT+V + N TI+GQG WW KYR+ N TR
Sbjct: 195 YGYGREHPGPRYSSLIHGQNLTEVSLESCPILRHNGTIDGQGRTWWTKYRQNLLNHTRGP 254
Query: 195 LIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI-DSPNTDGINP 248
L+++M+S YS NV TI AP+ D+PNTDGI+P
Sbjct: 255 LVQIMWSKR-------------------YSKNV-----TILAPLDDAPNTDGIDP 285
>gi|315606960|ref|ZP_07881966.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
gi|315251341|gb|EFU31324.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
Length = 459
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 174/388 (44%), Gaps = 44/388 (11%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLT-GSFNLTSHFTLYIH 117
L G DGKT A A+ K+ G A++++ G +L G +L L I
Sbjct: 47 LARLGAKTDGKTDARPAMIKALRQARKW---GRARIVLSGGVFLMCGPIHLVDGVCLDIR 103
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
+ A L S + + LP + + G +S +I+G NL DV + G I+G
Sbjct: 104 EGATLRFSPEPRFY--LPTVATSWEG--TFLNNYSPMIYGRNLHDVSIVG-KGLIDGNCA 158
Query: 178 PWWIKYRKKQ------------------------FNVTRPYLIEVMFSDNVQISNLTLID 213
+ +R +Q + RP LI++ NV I + +I+
Sbjct: 159 ATFATWRARQKEGQTLSRRMNHEERPLAERNFGEGHWLRPQLIQLFGCRNVTIEGVKIIN 218
Query: 214 SPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSG 273
SP W +H + S NV+ +GL A + N DGI+P+S N IED +GDD VA+KSG
Sbjct: 219 SPFWCIHLLQSENVICRGLRYDAKL--VNNDGIDPESSRNVLIEDVSFDNGDDNVAIKSG 276
Query: 274 WDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDIT-AINTQSGVRI 332
D G P++++IIRR C A+ +GSEMSGG+++V ED A + G+ I
Sbjct: 277 RDNDGWTHAHPSENIIIRR--CRFKGLHAVVIGSEMSGGVRNVFVEDCDFAGYCKRGLYI 334
Query: 333 KTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSH--PDPGFDPKALPTVTGINYRDMV 390
KT RG YVK IY++ ++ + ++T Y F V G++ R
Sbjct: 335 KTNPDRGGYVKNIYMKDCRFDEVEDLIYVTSMYAGEGLGSRHFSEVEHLLVDGVSCRRAR 394
Query: 391 ADNVTQSAKLDGIRNDPFTGICISNVTI 418
A + L G + P + I V I
Sbjct: 395 AAGIV----LQGTKAKPIRDVTIRRVEI 418
>gi|413925950|gb|AFW65882.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 163
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 74/108 (68%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFGGVGDG+T NT AF A+ + GG L VP G WL GSFNLTSH TL++ +
Sbjct: 52 IADFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWLAGSFNLTSHMTLFLAR 111
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVT 166
A+L A+QD WPL+ PLPSYGRGR+ PG R++S I G L DVV+T
Sbjct: 112 GAVLKATQDTRGWPLVEPLPSYGRGRELPGPRYASFIHGDGLRDVVIT 159
>gi|253687486|ref|YP_003016676.1| glycoside hydrolase family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251754064|gb|ACT12140.1| glycoside hydrolase family 28 [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 460
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 169/382 (44%), Gaps = 47/382 (12%)
Query: 72 NTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEW 131
NT+AF AI + AA GG + VP G +L L S+ L + KDA ++AS + + +
Sbjct: 53 NTEAFQKAIDDC---AAAGGGTVHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTEIAAY 109
Query: 132 PLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRK------ 185
Y E + I + +V +TG TI+GQG WW ++R+
Sbjct: 110 RATEKT-KYA----EAENGWLPFISIADAQNVAITG-QGTIDGQGAVWWERWRENIRATG 163
Query: 186 KQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDG 245
K+ RP LI + S NV + +TL SPS+++ YS +V + G I +P +PNTD
Sbjct: 164 KKGGTDRPRLIYIKSSSNVLVDGVTLTHSPSFHIVMRYSHDVDVNGTRILSPWHAPNTDA 223
Query: 246 INPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305
I+P N RI +NYI DD +A+K+ + G+ I ++ I++
Sbjct: 224 IDPIDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANNIL---KQGRGISI 280
Query: 306 GSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDY 365
GSE SGG+ +V E+ + G+RIKT G+G VK I R M ++ Y
Sbjct: 281 GSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYY 340
Query: 366 GSHP--------------------------DPG--FDPKALPTVTGINYRDMVADNVTQS 397
+ P DP FD P + + ++ + T++
Sbjct: 341 KAAPIVQAEVDKMLAEGGFTMGEQIYPPDTDPAQPFDQYKTPHFSNVTIENLESTGKTKA 400
Query: 398 AK-LDGIRNDPFTGICISNVTI 418
A + G+ P +G NV I
Sbjct: 401 AAYIIGVPEAPLSGFHFDNVRI 422
>gi|320106925|ref|YP_004182515.1| glycoside hydrolase family protein [Terriglobus saanensis SP1PR4]
gi|319925446|gb|ADV82521.1| glycoside hydrolase family 28 [Terriglobus saanensis SP1PR4]
Length = 460
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 157/317 (49%), Gaps = 27/317 (8%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+T+FG GDG T ++ A I AA G ++ G +L+GS + S TL + K
Sbjct: 34 VTNFGAKGDGITLDSPAIQRTIDA----AAKSGGTVVFRAGTYLSGSIFVKSGVTLRVDK 89
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+L SQ S++PL+P + G P ++L+ + +TG TI+G G+
Sbjct: 90 GVTILGSQKISDYPLMPTRVA-GIEMTWP----AALVNIYEQKNAEITG-EGTIDGDGKV 143
Query: 179 WWIKY---RK----------KQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSS 225
+W Y RK ++ RP LI+V S V++S L L S W VH YS
Sbjct: 144 FWDGYWSLRKDYDTRGIRWAADYDSKRPRLIQVFNSSQVKLSGLMLRRSGFWTVHICYSH 203
Query: 226 NVLIQGLTIR--APIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGM 283
+V + GLTIR P+TDGI+ DS ++ I DD + +K+G D G++V
Sbjct: 204 DVTLDGLTIRNNEGGRGPSTDGIDIDSSKKVLVQHADIAVNDDALCLKAGRDSDGLRVNR 263
Query: 284 PTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAI-NTQSGVRIKTAVGRGAYV 342
PT+ +++R + I +A + +GSE SGG +++ A +T + G+ K+A RG +
Sbjct: 264 PTEDIVLRDSV-IRDGAAGVTIGSETSGGFRNIEAYGLTVLKQVPVGILFKSARTRGGWG 322
Query: 343 KEIYVRRMTMKTMKYVF 359
+ + +TM + V
Sbjct: 323 ENLRFHDITMTDVPVVL 339
>gi|419957067|ref|ZP_14473133.1| glycoside hydrolase family protein [Enterobacter cloacae subsp.
cloacae GS1]
gi|388607225|gb|EIM36429.1| glycoside hydrolase family protein [Enterobacter cloacae subsp.
cloacae GS1]
Length = 430
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 172/375 (45%), Gaps = 52/375 (13%)
Query: 94 LIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSS 153
+++P G++LTG+ L S +L + A L+ SQD +++PL+ + G P G
Sbjct: 36 IVIPQGRFLTGALFLKSGVSLRLDAGAQLVGSQDLADYPLINTRVA-GIDMRWPAG---- 90
Query: 154 LIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQ-------------------FNVTRPY 194
+I + +V +TG TI+GQG WW ++ ++ RP
Sbjct: 91 IINIIDCENVSITG-TGTIDGQGVIWWQRFWGDDERSGMVGDYSARGLRWVVDYDCQRPR 149
Query: 195 LIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNT 254
I V S N+ + + T +S WN+H YS + ++ + I P+TDGI+ DSC
Sbjct: 150 NILVFESQNILLRDFTSRESGFWNIHLCYSRRIAVEAVQISNSA-GPSTDGIDVDSCEQV 208
Query: 255 RIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIK 314
RIE + DD + +KSG + + ++IR C + I LGSE SGGI+
Sbjct: 209 RIERCIVSCNDDNICIKSGRGREAAQKARTARDIVIRG--CTLNKGSGITLGSETSGGIE 266
Query: 315 DVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-----VFWM----TGDY 365
V ED T G RIK+A RG ++++I V+ + + +++ + W GD
Sbjct: 267 RVLIEDNAFNGTGVGFRIKSARNRGGFIRDITVQNLRLTDVRFPVLIQLNWFPQYSYGDQ 326
Query: 366 GSHPD---------PGFDPKA-LPTVTGINYRDMVADN-----VTQSAKLDGIRNDPFTG 410
+ D G + +A L V+G+ ++M A +++ ++G P G
Sbjct: 327 SNLSDKPEHWRKLAEGVEGEAGLTEVSGLTIKNMTARRSDKKYFSRAFFIEGYPERPVAG 386
Query: 411 ICISNVTIKLTEKPK 425
+ + + I TE K
Sbjct: 387 LTLEGIFIDATEFGK 401
>gi|298383805|ref|ZP_06993366.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298263409|gb|EFI06272.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 506
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 156/325 (48%), Gaps = 49/325 (15%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
FG V D +T+A AI + A GG +++ PG + TG+ + S L I K
Sbjct: 63 FGAVADSTVLSTEAIQKAIDSC---AVSGGGTVVLQPGYYQTGALFVKSGVNLQIGKGVT 119
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLT------DVV-----VTGGNA 170
LLAS D +P F S I G +T ++V G
Sbjct: 120 LLASPDIHHYP-----------------EFRSRIAGIEMTWPAAVINIVDEKNAAISGEG 162
Query: 171 TINGQGEPWWIKY---RKK----------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSW 217
T++ +G+ +W KY RK+ ++ R I V S ++ +S TL+ + W
Sbjct: 163 TLDCRGKVFWDKYWEMRKEYEARGLRWIVDYDCKRVRGILVERSSDITLSGFTLMRTGFW 222
Query: 218 NVHPVYSSNVLIQGLTIRAPI--DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWD 275
+YS I GLTI I P+TDGI+ DS N IE+ + DD + +KSG D
Sbjct: 223 GCQILYSDYCTIDGLTINNNIGGHGPSTDGIDIDSSCNILIENCDVDCNDDNICIKSGRD 282
Query: 276 EYGIKVGMPTQHLIIRRLICISPDSAA-IALGSEMSGGIKDVRAEDITAINTQSGVRIKT 334
G++V PT+++++R C + A I GSE SG I++V D+ A+ T + +R+K+
Sbjct: 283 ADGLRVNRPTENVVVRN--CTARKGAGLITCGSETSGSIRNVLGYDLKAVGTYTVLRLKS 340
Query: 335 AVGRGAYVKEIYVRRMTMKTMKYVF 359
A+ RG ++ IY+ R++ + ++ V
Sbjct: 341 AMNRGGTIENIYMTRVSAENVRQVL 365
>gi|380693875|ref|ZP_09858734.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 506
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 155/325 (47%), Gaps = 49/325 (15%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
FG V D +T+A AI + A GG +I+ PG + TG+ + S L I K
Sbjct: 63 FGAVADSTVLSTEAIQKAIDSC---AVSGGGTVILQPGYYQTGALFVKSGVNLQIGKGVT 119
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLT------DVV-----VTGGNA 170
LLAS D +P F S I G +T ++V G
Sbjct: 120 LLASPDIHHYP-----------------EFRSRIAGIEMTWPAAVINIVDEKNAAVSGEG 162
Query: 171 TINGQGEPWWIKY---RKK----------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSW 217
T++ +G+ +W KY RK+ ++ R I V S ++ +S TL+ + W
Sbjct: 163 TLDCRGKVFWDKYWEMRKEYVAKGLRWIVDYDCKRVRGILVERSSDITLSGFTLMRTGFW 222
Query: 218 NVHPVYSSNVLIQGLTIRAPI--DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWD 275
+YS I GLTI I P+TDGI+ DS N IE+ + DD + +KSG D
Sbjct: 223 GCQILYSDYCTIDGLTINNNIGGHGPSTDGIDIDSSCNILIENCDVDCNDDNICIKSGRD 282
Query: 276 EYGIKVGMPTQHLIIRRLICISPDSAA-IALGSEMSGGIKDVRAEDITAINTQSGVRIKT 334
G++V PT+++++R C + A I GSE SG I+++ D+ A+ T + +R+K+
Sbjct: 283 ADGLRVNRPTENVVVRN--CTARKGAGLITCGSETSGSIRNILGYDLKAVGTSTVLRLKS 340
Query: 335 AVGRGAYVKEIYVRRMTMKTMKYVF 359
A+ RG ++ IY+ R++ + + V
Sbjct: 341 AMNRGGTIENIYMTRVSAENISQVL 365
>gi|238916395|ref|YP_002929912.1| glycoside hydrolase family 28-like polygalacturonase [Eubacterium
eligens ATCC 27750]
gi|238871755|gb|ACR71465.1| Glycoside Hydrolase Family 28-like polygalacturonase [Eubacterium
eligens ATCC 27750]
Length = 458
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 181/413 (43%), Gaps = 76/413 (18%)
Query: 70 TSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDES 129
+ N A N AI+ +S+ GG +++P G W T + S L I K+A+L S+D
Sbjct: 36 SRNADAINRAINYISE---KGGGTVVIPDGIWFTAPIEIKSDVELRIEKNAILKFSKDID 92
Query: 130 EWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPW---------- 179
++PL+ + +Y + R S I N ++ +TGG I+G G+ W
Sbjct: 93 QYPLI--ITNY---EGQECIRAKSPITAENAINIGITGG-GVIDGSGDMWRPIKQFKITD 146
Query: 180 --WIKYRKKQ----------------------------------------FNVTRPYLIE 197
W KK ++ RP ++
Sbjct: 147 RQWEALMKKSQYIIDTKGGGIWMPTESSFKGNEHNIQLDAENALEKASEYYDFYRPVMVS 206
Query: 198 VMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIE 257
+ + + +T +SP+WN+HP + N+ ++ +T+ P + N DGI+ +SC I
Sbjct: 207 LRHCKRILLDGVTFKNSPAWNIHPFFCKNLTVRNVTVSNPYYAQNGDGIDVESCKKVHIH 266
Query: 258 DNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVR 317
+ +GDD + +KSG + ++ P + + I + ++ +GSEMS GIK+V
Sbjct: 267 NCTFETGDDAICLKSGKNAVARQIEGPCEDVYIHDCL-VNEGHGGFVIGSEMSRGIKNVL 325
Query: 318 AEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMK---------TMKYVFWMTGDYGSH 368
E+ T + T GVRIK+A+GRG ++ I ++ + M TM YV +
Sbjct: 326 VENCTFLGTDVGVRIKSALGRGGVIENINIKNINMVDIKEQAIILTMSYV--LNSLNRDE 383
Query: 369 PDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLT 421
G D +P IN+ + ++ ++ I++ P T I+++ IK +
Sbjct: 384 EINGIDKDDIPYFKNINFEGINCLGAKEAVVIEPIKDMPET---ITDIHIKAS 433
>gi|383120489|ref|ZP_09941217.1| parallel beta-helix [Bacteroides sp. 1_1_6]
gi|251840459|gb|EES68541.1| parallel beta-helix [Bacteroides sp. 1_1_6]
Length = 506
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 156/325 (48%), Gaps = 49/325 (15%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
FG V D +T+A AI + A GG +++ PG + TG+ + S L I K
Sbjct: 63 FGAVADSTVLSTEAIQKAIDSC---AISGGGTVVLQPGYYQTGALFVKSGVNLQIGKGVT 119
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLT------DVV-----VTGGNA 170
LLAS D +P F S I G +T ++V G
Sbjct: 120 LLASPDIHHYP-----------------EFRSRIAGIEMTWPAAVINIVDEKNAAISGEG 162
Query: 171 TINGQGEPWWIKY---RKK----------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSW 217
T++ +G+ +W KY RK+ ++ R I V S ++ +S TL+ + W
Sbjct: 163 TLDCRGKVFWDKYWEMRKEYEARGLRWIVDYDCKRVRGILVERSSDITLSGFTLMRTGFW 222
Query: 218 NVHPVYSSNVLIQGLTIRAPI--DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWD 275
+YS I GLTI I P+TDGI+ DS N IE+ + DD + +KSG D
Sbjct: 223 GCQILYSDYCTIDGLTINNNIGGHGPSTDGIDIDSSCNILIENCDVDCNDDNICIKSGRD 282
Query: 276 EYGIKVGMPTQHLIIRRLICISPDSAA-IALGSEMSGGIKDVRAEDITAINTQSGVRIKT 334
G++V PT+++++R C + A I GSE SG I++V D+ A+ T + +R+K+
Sbjct: 283 ADGLRVNRPTENVVVRN--CTARKGAGLITCGSETSGSIRNVLGYDLKAVGTYTVLRLKS 340
Query: 335 AVGRGAYVKEIYVRRMTMKTMKYVF 359
A+ RG ++ IY+ R++ + ++ V
Sbjct: 341 AMNRGGTIENIYMTRVSAENVRQVL 365
>gi|325105247|ref|YP_004274901.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974095|gb|ADY53079.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 456
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 178/368 (48%), Gaps = 48/368 (13%)
Query: 54 KHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWL-TGSFNLTSHF 112
K+ ++TDFG VGD + + AF+ I + GA++IVPPG +L G ++ +
Sbjct: 49 KNKLIITDFGAVGDSLSDSKPAFDKVIQICKE---QNGARIIVPPGVYLLRGPIHMVDNM 105
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
++ I K A L+ S + ++ LP + + G +S I+ + +V + G TI
Sbjct: 106 SIDIQKGAKLIFSNEAKDY--LPTVLTSWEGTFLY--NYSPFIYAYQVKNVAIIG-EGTI 160
Query: 173 NGQGEP----WWIKYR-----------------KKQF---NVTRPYLIEVMFSDNVQISN 208
+G + W K + K+QF + RP I+ N+ I
Sbjct: 161 DGNAKDSFNLWHGKQKQSQELSRKMNHENVPIEKRQFGEGHFLRPQFIQFFECKNILIEG 220
Query: 209 LTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCV 268
+T+ +SP W VH + S N+ + + A + N DG +P+ N IED + DD +
Sbjct: 221 VTITNSPFWCVHFLKSENITARKVKFDAF--NKNNDGFDPEYSKNVLIEDIDFNNADDNI 278
Query: 269 AVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDIT-AINTQ 327
A+K+G D G ++G+ ++++IIR C + +GSEMS G+++V E+ T +
Sbjct: 279 AIKAGRDYEGRRIGLTSENIIIRN--CRFKGLHGVVIGSEMSAGVQNVFVENCTYGGYCK 336
Query: 328 SGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYR 387
G+ +K+ RG ++++IY+ + ++ F++T Y + GF+ + R
Sbjct: 337 RGIYLKSNPDRGGFIRDIYINNVVFGEVEDCFFVTSYYHGEGN-GFET---------DIR 386
Query: 388 DMVADNVT 395
++ DN+T
Sbjct: 387 NVFVDNLT 394
>gi|212693826|ref|ZP_03301954.1| hypothetical protein BACDOR_03347 [Bacteroides dorei DSM 17855]
gi|237709356|ref|ZP_04539837.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265755031|ref|ZP_06089945.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|423242200|ref|ZP_17223310.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
gi|212663715|gb|EEB24289.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229456741|gb|EEO62462.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234642|gb|EEZ20221.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|392639944|gb|EIY33752.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
Length = 468
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 166/336 (49%), Gaps = 54/336 (16%)
Query: 59 LTDFGGV--GDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYI 116
+ DFG +G+ +A N AI S+ GG ++VPPG++LTG L S+ L++
Sbjct: 49 IKDFGAKEGNNGEIFCHEAINLAILTCSQ---AGGGTVLVPPGEFLTGPITLKSNVNLHL 105
Query: 117 HKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG 176
+ A L S ++ + P + + G D LI+ +++ +TG I+GQ
Sbjct: 106 EEGAYLKFSSEK--YLYTPTVLTRWEGVD--CYNLHPLIYAYGESNIAITG-KGIIDGQA 160
Query: 177 --EPWW----------------------------------IKYRKKQF-NVTRPYLIEVM 199
+ WW I R+ F + RP LI +
Sbjct: 161 SNDNWWSMCGAPHYGWKEGMTAQKNGGRNKLLMYAETFAPIDKRQMTFEDGLRPQLINLY 220
Query: 200 FSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDN 259
+ + I N+TL +SP W +HP++ ++ ++G+ + + PN+DG +P+S N IE+
Sbjct: 221 RCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKVSS--HGPNSDGCDPESSKNVLIENC 278
Query: 260 YIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRA 318
+GDDC+A+KSG + G K +P++++I+R C D + +GSE+SGG K++
Sbjct: 279 IFDTGDDCIAIKSGRNADGRKWNVPSENIIVRN--CEMKDGHGGVVVGSEISGGYKNLFV 336
Query: 319 ED--ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
E+ + + N + +RIKT RG ++ IYVR + +
Sbjct: 337 ENCKMDSPNLERVIRIKTNNCRGGVIENIYVRNIEV 372
>gi|423232717|ref|ZP_17219117.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|423247409|ref|ZP_17228459.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
gi|392623156|gb|EIY17261.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|392632549|gb|EIY26508.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
Length = 468
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 166/336 (49%), Gaps = 54/336 (16%)
Query: 59 LTDFGGV--GDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYI 116
+ DFG +G+ +A N AI S+ GG ++VPPG++LTG L S+ L++
Sbjct: 49 IKDFGAKEGNNGEIFCHEAINLAILTCSQ---AGGGTVLVPPGEFLTGPITLKSNVNLHL 105
Query: 117 HKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG 176
+ A L S ++ + P + + G D LI+ +++ +TG I+GQ
Sbjct: 106 EEGAYLKFSSEK--YLYTPTVLTRWEGVD--CYNLHPLIYAYGESNIAITG-KGIIDGQA 160
Query: 177 --EPWW----------------------------------IKYRKKQF-NVTRPYLIEVM 199
+ WW I R+ F + RP LI +
Sbjct: 161 SNDNWWSMCGAPHYGWKEGMTAQKNGGRNKLLMYAKTFAPIDKRQMTFEDGLRPQLINLY 220
Query: 200 FSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDN 259
+ + I N+TL +SP W +HP++ ++ ++G+ + + PN+DG +P+S N IE+
Sbjct: 221 RCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKVSS--HGPNSDGCDPESSKNVLIENC 278
Query: 260 YIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRA 318
+GDDC+A+KSG + G K +P++++I+R C D + +GSE+SGG K++
Sbjct: 279 IFDTGDDCIAIKSGRNADGRKWNVPSENIIVRN--CEMKDGHGGVVVGSEISGGYKNLFV 336
Query: 319 ED--ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
E+ + + N + +RIKT RG ++ IYVR + +
Sbjct: 337 ENCKMDSPNLERVIRIKTNNCRGGVIENIYVRNIEV 372
>gi|345519938|ref|ZP_08799345.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254836194|gb|EET16503.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
Length = 594
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 194/443 (43%), Gaps = 51/443 (11%)
Query: 68 GKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQD 127
G T + + +++ + GG +++P GKW + L S+ L++ K A + +
Sbjct: 131 GMTEDAPITDVVNRTIAEVSNQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFAGR 190
Query: 128 ESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG-----------------GNA 170
++ LP + + G + G ++ I+ ++ +TG A
Sbjct: 191 AEDY--LPAVFTRHEGVEIMGP--AAFIYANGENNIAITGEGTIYGPPMDAEIRKRPNGA 246
Query: 171 TINGQGEPWWIKYRKKQFN------VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYS 224
++ + PW + ++ ++ RP I + NV I + + S WNV P+Y
Sbjct: 247 SVVEKDVPWDMPIEQRIYDGMEGRTFYRPKTISPINCTNVLIEGIAMERSTLWNVVPIYC 306
Query: 225 SNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMP 284
NV+I+G+T+ + P+ DGI+ +SC N IE + GDDC +K+G E G++VG P
Sbjct: 307 ENVIIRGITVNS-TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKP 365
Query: 285 TQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKE 344
T++++IR + I GSE +G IK++ D T++G+R KT RG
Sbjct: 366 TENVVIRYSLA-QHGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDN 424
Query: 345 IYVRRMTMKTMKYVF--------WMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQ 396
Y R+ M + F + G+ + + P V I +D + ++ Q
Sbjct: 425 TYYERLRMINVGKAFTWDLLGSAYYMGELAARYPARKVNRLTPDVKNILIKDFIVESADQ 484
Query: 397 SAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSR-VTPQA----CELLPK 451
+GI PF + + N IK K+L + G T R +T +A +L
Sbjct: 485 FFTANGIPEIPFNQVVVENGEIKC----KKLIGALNDATGFTMRKLTIEAQHNDIHILDG 540
Query: 452 KEPTDCFFPDD--KLPIDDVRLN 472
K D F D KLP ++ +N
Sbjct: 541 K---DILFEDIHFKLPAGEIMVN 560
>gi|402307012|ref|ZP_10826044.1| glycosyl hydrolase, family 88 [Prevotella sp. MSX73]
gi|400379233|gb|EJP32078.1| glycosyl hydrolase, family 88 [Prevotella sp. MSX73]
Length = 853
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 167/367 (45%), Gaps = 66/367 (17%)
Query: 70 TSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDES 129
N KA N AI+ S GG ++VP G W TG+ L SH L + + A L +
Sbjct: 58 AQNQKAINRAIAVAS---MKGGGSVVVPNGTWNTGAITLKSHVNLVVEEGATLHFVFEPD 114
Query: 130 EWPLL----PPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG--EPWWI-- 181
+PL+ L Y +S I+ TD+ V+G TI+G G + WW
Sbjct: 115 LYPLVRTAWEGLECY---------NYSPCIYAYGATDIAVSG-KGTIDGGGSNDTWWAWN 164
Query: 182 -------------------------KY-------RKKQFNV---TRPYLIEVMFSDNVQI 206
KY K++F RP LI M + + I
Sbjct: 165 GNPRFGYKEGVTTESQRLGSRAQLQKYAEDGVPVEKRKFGKGCGLRPQLINFMHCERILI 224
Query: 207 SNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDD 266
++ +++SP W +HP+ S N+ + + I + PN DG +P++C N I++ +GDD
Sbjct: 225 RDVKMVNSPFWVIHPLLSKNITVDNVYIWN--EGPNGDGCDPEACENVLIQNCTFHTGDD 282
Query: 267 CVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRAED--ITA 323
C+A+KSG + G G P++++IIR C D + +GSE+SGG ++V AED + +
Sbjct: 283 CIAIKSGRNNDGRLWGKPSKNIIIRN--CKMEDGHGGVVIGSEISGGCENVYAEDCYMDS 340
Query: 324 INTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-YVFWMTGDYGSHPDPGFDPKALPTVT 382
+ +RIKT RG ++ I +R + + K V + DY P PTV
Sbjct: 341 PELERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAVLKINLDY--EPREACYRGFQPTVR 398
Query: 383 GINYRDM 389
+N ++
Sbjct: 399 NVNMENV 405
>gi|189462646|ref|ZP_03011431.1| hypothetical protein BACCOP_03343 [Bacteroides coprocola DSM 17136]
gi|189430807|gb|EDU99791.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 482
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 161/334 (48%), Gaps = 51/334 (15%)
Query: 59 LTDFGGVGDGKTSNT-KAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
+ DFG D + N AI+ ++ +GG +++P G + TG + S+ L++
Sbjct: 65 IKDFGATTDTPDQPCHEQINLAITTCNQ---EGGGTVVIPKGTFYTGPITMKSNVNLHLE 121
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG- 176
+ A L S D+ + P + + G D R LI+ +++ +TG TI+GQG
Sbjct: 122 EGATLKFSTDQKLY--FPGVITRWEGLDCYNAR--PLIYAYGESNIAITG-KGTIDGQGS 176
Query: 177 -EPWW------------------IKYRKKQF-----------------NVTRPYLIEVMF 200
E WW + R++ + RP LI
Sbjct: 177 NETWWPMCGAAHYGWKEGMHSQKLGSRERLMGYAELKRPIYERAMTPEDALRPQLINFYL 236
Query: 201 SDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNY 260
+ + I ++TL++SP W +HP+ +++++G+ I PN DG +P+SC N IE+
Sbjct: 237 CNTILIEDVTLLNSPFWVIHPLLCESLIVRGVKIYN--RGPNGDGCDPESCKNVLIENCR 294
Query: 261 IVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAED 320
+GDDC+A+KSG +E G K P++++I+R + + +GSE+SGG +++ E+
Sbjct: 295 FDTGDDCIAIKSGRNEDGRKWNRPSENIIVRNCE-MKNGHGGVVIGSEISGGYRNLYVEN 353
Query: 321 ITAINTQ--SGVRIKTAVGRGAYVKEIYVRRMTM 352
+ Q +RIKT RG V+ ++VR + +
Sbjct: 354 CVMDSPQLDRVIRIKTNDCRGGIVENVFVRNIKV 387
>gi|345513234|ref|ZP_08792756.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|229437148|gb|EEO47225.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
Length = 468
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 166/336 (49%), Gaps = 54/336 (16%)
Query: 59 LTDFGGV--GDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYI 116
+ DFG +G+ +A N AI S+ GG ++VPPG++LTG L S+ L++
Sbjct: 49 IKDFGAKEGNNGEIFCHEAINLAILTCSQ---AGGGTVLVPPGEFLTGPITLKSNVNLHL 105
Query: 117 HKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG 176
+ A L S ++ + P + + G D LI+ +++ +TG I+GQ
Sbjct: 106 EEGAYLKFSSEK--YLYTPTVLTRWEGVD--CYNLHPLIYAYGESNIAITG-KGIIDGQA 160
Query: 177 --EPWW----------------------------------IKYRKKQF-NVTRPYLIEVM 199
+ WW I R+ F + RP LI +
Sbjct: 161 SNDNWWSMCGAPHYGWKEGMTAQKNGGRNKLLMYAETFAPIDKRQMTFEDGLRPQLINLY 220
Query: 200 FSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDN 259
+ + I N+TL +SP W +HP++ ++ ++G+ + + PN+DG +P+S N IE+
Sbjct: 221 RCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKVSS--HGPNSDGCDPESSKNVLIENC 278
Query: 260 YIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRA 318
+GDDC+A+KSG + G K +P++++I+R C D + +GSE+SGG K++
Sbjct: 279 IFDTGDDCIAIKSGRNADGRKWNVPSENIIVRN--CEMKDGHGGVVVGSEISGGYKNLFV 336
Query: 319 ED--ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
E+ + + N + +RIKT RG ++ IYVR + +
Sbjct: 337 ENCKMDSPNLERIIRIKTNNCRGGVIENIYVRNIEV 372
>gi|319644257|ref|ZP_07998770.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|317384248|gb|EFV65220.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 580
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 194/443 (43%), Gaps = 51/443 (11%)
Query: 68 GKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQD 127
G T + + +++ + GG +++P GKW + L S+ L++ K A + +
Sbjct: 117 GMTEDAPITDVVNRTIAEVSNQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFAGR 176
Query: 128 ESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG-----------------GNA 170
++ LP + + G + G ++ I+ ++ +TG A
Sbjct: 177 AEDY--LPAVFTRHEGVEIMGP--AAFIYANGENNIAITGEGTIYGPPMDAEIRKRPNGA 232
Query: 171 TINGQGEPWWIKYRKKQFN------VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYS 224
++ + PW + ++ ++ RP I + NV I + + S WNV P+Y
Sbjct: 233 SVVEKDVPWDMPIEQRIYDGMEGRTFYRPKTISPINCTNVLIEGIAMERSTLWNVVPIYC 292
Query: 225 SNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMP 284
NV+I+G+T+ + P+ DGI+ +SC N IE + GDDC +K+G E G++VG P
Sbjct: 293 ENVIIRGITVNS-TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKP 351
Query: 285 TQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKE 344
T++++IR + I GSE +G IK++ D T++G+R KT RG
Sbjct: 352 TENVVIRYSLA-QHGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDN 410
Query: 345 IYVRRMTMKTMKYVF--------WMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQ 396
Y R+ M + F + G+ + + P V I +D + ++ Q
Sbjct: 411 TYYERLRMINVGKAFTWDLLGSAYYMGELAARYPARKVNRLTPDVKNILIKDFIVESADQ 470
Query: 397 SAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSR-VTPQA----CELLPK 451
+GI PF + + N IK K+L + G T R +T +A +L
Sbjct: 471 FFTANGIPEIPFNQVVVENGEIKC----KKLIGALNDATGFTMRKLTIEAQHNDIHILDG 526
Query: 452 KEPTDCFFPDD--KLPIDDVRLN 472
K D F D KLP ++ +N
Sbjct: 527 K---DILFEDIHFKLPAGEIMVN 546
>gi|288926468|ref|ZP_06420388.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288336759|gb|EFC75125.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 843
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 167/367 (45%), Gaps = 66/367 (17%)
Query: 70 TSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDES 129
N KA N AI+ S GG ++VP G W TG+ L SH L + + A L +
Sbjct: 48 AQNQKAINRAIAVAS---MKGGGSVVVPNGTWNTGAITLKSHVNLVVEEGATLHFVFEPD 104
Query: 130 EWPLL----PPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG--EPWWI-- 181
+PL+ L Y +S I+ TD+ V+G TI+G G + WW
Sbjct: 105 LYPLVRTAWEGLECY---------NYSPCIYAYGATDIAVSG-KGTIDGGGSNDTWWAWN 154
Query: 182 -------------------------KY-------RKKQFNV---TRPYLIEVMFSDNVQI 206
KY K++F RP LI M + + I
Sbjct: 155 GNPRFGYKEGVTTESQRLGSRAQLQKYAEDGVPVEKRKFGKGRGLRPQLINFMHCERILI 214
Query: 207 SNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDD 266
++ +++SP W +HP+ S N+ + + I + PN DG +P++C N I++ +GDD
Sbjct: 215 RDVKMVNSPFWVIHPLLSKNITVDNVYIWN--EGPNGDGCDPEACENVLIQNCTFHTGDD 272
Query: 267 CVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRAED--ITA 323
C+A+KSG + G G P++++IIR C D + +GSE+SGG ++V AED + +
Sbjct: 273 CIAIKSGRNNDGRLWGKPSKNIIIRN--CKMEDGHGGVVIGSEISGGCENVYAEDCYMDS 330
Query: 324 INTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-YVFWMTGDYGSHPDPGFDPKALPTVT 382
+ +RIKT RG ++ I +R + + K V + DY P PTV
Sbjct: 331 PELERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAVLKINLDY--EPREACYRGFQPTVR 388
Query: 383 GINYRDM 389
+N ++
Sbjct: 389 NVNMENV 395
>gi|319644236|ref|ZP_07998749.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345519913|ref|ZP_08799321.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|254836217|gb|EET16526.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|317384227|gb|EFV65199.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 468
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 181/381 (47%), Gaps = 57/381 (14%)
Query: 16 VIKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAV--LTDFGGV--GDGKTS 71
++ +L GL Q+ + K S IE Q V + DFG +G+
Sbjct: 5 LVSVLCICAYFGLAHAQIPQ-EIWKESEQIEKQIKKTSFPDRVYNIKDFGAKEGNNGEIL 63
Query: 72 NTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEW 131
+A N AI S+ GG ++VPPG++LTG L S+ L++ + A L S ++ +
Sbjct: 64 CHEAINLAILTCSQ---TGGGTVLVPPGEFLTGPITLKSNVNLHLEEGAYLKFSSEK--Y 118
Query: 132 PLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG--EPWW--------- 180
P + + G D LI+ +++ +TG I+GQ + WW
Sbjct: 119 LYTPTVLTRWEGVD--CYNLHPLIYAYGESNIGITG-KGIIDGQASNDNWWSMCGAPHYG 175
Query: 181 -------------------------IKYRKKQF-NVTRPYLIEVMFSDNVQISNLTLIDS 214
I R+ F + RP LI + + + I N+TL +S
Sbjct: 176 WKEGMTAQKNGGRDKLLMYAETFAPIDKRQMTFEDGLRPQLINLYRCNTILIENVTLKNS 235
Query: 215 PSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGW 274
P W +HP++ ++ ++G+ + + PN+DG +P+S N IE+ +GDDC+A+KSG
Sbjct: 236 PFWVIHPLFCESLTVRGVKVSS--HGPNSDGCDPESSKNVLIENCIFDTGDDCIAIKSGR 293
Query: 275 DEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRAED--ITAINTQSGVR 331
+ G K +P++++I+R C D + +GSE+SGG K++ E+ + + N + +R
Sbjct: 294 NADGRKWNVPSENIIVRN--CEMKDGHGGVVVGSEISGGYKNLFVENCKMDSPNLERVIR 351
Query: 332 IKTAVGRGAYVKEIYVRRMTM 352
IKT RG ++ IYVR + +
Sbjct: 352 IKTNNCRGGVIENIYVRNVEV 372
>gi|315608643|ref|ZP_07883624.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
gi|315249682|gb|EFU29690.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
Length = 873
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 167/367 (45%), Gaps = 66/367 (17%)
Query: 70 TSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDES 129
N KA N AI+ S GG ++VP G W TG+ L SH L + + A L +
Sbjct: 78 AQNQKAINRAIAVAS---MKGGGSVVVPNGTWNTGAITLKSHVNLVVEEGATLHFVFEPD 134
Query: 130 EWPLL----PPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG--EPWWI-- 181
+PL+ L Y +S I+ TD+ V+G TI+G G + WW
Sbjct: 135 LYPLVRTAWEGLECYN---------YSPCIYAYGATDIAVSG-KGTIDGGGSNDTWWAWN 184
Query: 182 -------------------------KY-------RKKQFNV---TRPYLIEVMFSDNVQI 206
KY K++F RP LI M + + I
Sbjct: 185 GNPRFGYKEGVTTESQRLGSRAQLQKYAEDGVPVEKRKFGKGRGLRPQLINFMHCERILI 244
Query: 207 SNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDD 266
++ +++SP W +HP+ S N+ + + I + PN DG +P++C N I++ +GDD
Sbjct: 245 RDVKMVNSPFWVIHPLLSKNITVDNVYIWN--EGPNGDGCDPEACENVLIQNCTFHTGDD 302
Query: 267 CVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRAED--ITA 323
C+A+KSG + G G P++++IIR C D + +GSE+SGG ++V AED + +
Sbjct: 303 CIAIKSGRNNDGRLWGKPSKNIIIRN--CKMEDGHGGVVIGSEISGGCENVYAEDCYMDS 360
Query: 324 INTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-YVFWMTGDYGSHPDPGFDPKALPTVT 382
+ +RIKT RG ++ I +R + + K V + DY P PTV
Sbjct: 361 PELERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAVLKINLDY--EPREACYRGFQPTVR 418
Query: 383 GINYRDM 389
+N ++
Sbjct: 419 NVNMENV 425
>gi|423312702|ref|ZP_17290639.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
gi|392687436|gb|EIY80729.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
Length = 468
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 181/381 (47%), Gaps = 57/381 (14%)
Query: 16 VIKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAV--LTDFGGV--GDGKTS 71
++ +L GL Q+ + K S IE Q V + DFG +G+
Sbjct: 5 LVSVLCICAYFGLAHAQIPQ-EIWKESEQIEKQIKKTSFPDRVYNIKDFGAKEGNNGEIL 63
Query: 72 NTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEW 131
+A N AI S+ GG ++VPPG++LTG L S+ L++ + A L S ++ +
Sbjct: 64 CHEAINLAILTCSQ---TGGGTVLVPPGEFLTGPITLKSNVNLHLEEGAYLKFSSEK--Y 118
Query: 132 PLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG--EPWW--------- 180
P + + G D LI+ +++ +TG I+GQ + WW
Sbjct: 119 LYTPTVLTRWEGVD--CYNLHPLIYAYGESNIGITG-KGIIDGQASNDNWWSMCGAPHYG 175
Query: 181 -------------------------IKYRKKQF-NVTRPYLIEVMFSDNVQISNLTLIDS 214
I R+ F + RP LI + + + I N+TL +S
Sbjct: 176 WKEGMTAQKNGGRDKLLMYAETFAPIDKRQMTFEDGLRPQLINLYRCNTILIENVTLKNS 235
Query: 215 PSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGW 274
P W +HP++ ++ ++G+ + + PN+DG +P+S N IE+ +GDDC+A+KSG
Sbjct: 236 PFWVIHPLFCESLTVRGVKVSS--HGPNSDGCDPESSKNVLIENCIFDTGDDCIAIKSGR 293
Query: 275 DEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRAED--ITAINTQSGVR 331
+ G K +P++++I+R C D + +GSE+SGG K++ E+ + + N + +R
Sbjct: 294 NADGRKWNVPSENIIVRN--CEMKDGHGGVVVGSEISGGYKNLFVENCKMDSPNLERVIR 351
Query: 332 IKTAVGRGAYVKEIYVRRMTM 352
IKT RG ++ IYVR + +
Sbjct: 352 IKTNNCRGGVIENIYVRNVEV 372
>gi|451820152|ref|YP_007456353.1| endopolygalacturonase [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451786131|gb|AGF57099.1| endopolygalacturonase [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 506
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 194/423 (45%), Gaps = 68/423 (16%)
Query: 69 KTSNTKAFNTAISN-LSKYAADGGAQLIVP-------PGKWLTGSFNLTSHFTLYIHKDA 120
K+ K + AI +++ + +GG ++++ P + TG+ + S+ L+I ++A
Sbjct: 78 KSRKIKFYGDAIQKAINEASFNGGGKVVIKGSDDSQNPNVYYTGAIYIKSNIELHIEENA 137
Query: 121 LLLASQDESE--WPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE- 177
+L ++++ +PL+ Y R FS I+ ++ +TG ++G +
Sbjct: 138 ILKFVRNKTNEFYPLV-----YTRWEGIEMMNFSPFIYSYEENNIAITG-KGILDGCADE 191
Query: 178 ----PWWIKY---------RKKQFNV-------------------TRPYLIEVMFSDNVQ 205
PW Y R++ FN+ RP I+ ++N+
Sbjct: 192 FNWMPWKFGYFNEEDQQIQRERLFNMGQEGVDVRNERIFSDDISTIRPPFIQPYKTNNIL 251
Query: 206 ISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGD 265
I ++T+++SP W V+PV N+ + G IR + N DG++P+SC + IE+ Y ++GD
Sbjct: 252 IRDITILNSPFWEVNPVLCENIKVSG--IRIDTNLYNNDGVDPESCKDMIIENCYFLTGD 309
Query: 266 DCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAED--ITA 323
DC+A+KSG + G +G+PT ++IIR I +GSE+SGG+ ++ D +
Sbjct: 310 DCIAIKSGRNNEGRNIGIPTSNIIIRNN-EFKDGHGGITIGSEISGGVNNIFGHDNYFDS 368
Query: 324 INTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYV------FWMTGDYGSHPDPGFDPKA 377
+R KT RG ++ IY++ T+ K F+ G G+H P A
Sbjct: 369 EELDYPIRFKTNAERGGLLENIYIKNSTVNKSKVAVIHADFFYEEGTNGNHK-PILRNIA 427
Query: 378 LPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGI 437
L + ++ + A N + L G + P I I + + + LQ NI+ +
Sbjct: 428 LSNIKTVDGGSIDAKN---ALYLKGFEDAPIENILIEDALLNGVKGEAVLQ----NIKNL 480
Query: 438 TSR 440
T R
Sbjct: 481 TFR 483
>gi|336415457|ref|ZP_08595796.1| hypothetical protein HMPREF1017_02904 [Bacteroides ovatus
3_8_47FAA]
gi|335940336|gb|EGN02203.1| hypothetical protein HMPREF1017_02904 [Bacteroides ovatus
3_8_47FAA]
Length = 461
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 175/381 (45%), Gaps = 58/381 (15%)
Query: 58 VLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
++TDFG V G+ NTKA +AI ++ GG +++VP G WLTG + S+ LY+
Sbjct: 54 IITDFGAVNGGRVDNTKAITSAIEACNQ---SGGGRVVVPAGTWLTGPIHFKSNVNLYLE 110
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
++A+L + + S++ LP + + G + +S L++ +V +T G T+ + +
Sbjct: 111 ENAVLNFTDNPSDY--LPAVMTSWEGLE--CYNYSPLLYAFECENVAIT-GKGTLQPKMD 165
Query: 178 PW--WIK------------YRKKQFNV-------------TRPYLIEVMFSDNVQISNLT 210
W W K Y K N+ RP+LI NV +
Sbjct: 166 TWKVWFKRPQPHLEALKELYAKASTNIPVIERQMAIGENHLRPHLIHFNRCKNVLLDGFK 225
Query: 211 LIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAV 270
+ +SP W +H L++ L ++A N D I+ + N +ED GDD V +
Sbjct: 226 IRESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDDIDFEMSRNFLVEDCSFDQGDDAVVI 283
Query: 271 KSGWDEYGIKVGMPTQHLIIRRLIC-ISPDSAAIALGSEMSGGIKDVRAEDITAINTQSG 329
K+G ++ ++ P ++++IR C I + +GSE+SGGI+++ D TA N+
Sbjct: 284 KAGRNQDAWRLNTPCENIVIRN--CQILKGHTLLGIGSEISGGIRNIYMHDCTAPNSVMR 341
Query: 330 V-RIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRD 388
+ +KT RG +++ +Y++ + T + V + T ++D
Sbjct: 342 LFFVKTNHRRGGFIENVYMKNVKAGTAQRVL-----------------EIDTEVLYQWKD 384
Query: 389 MVADNVTQSAKLDGIRNDPFT 409
+V + ++DGI D T
Sbjct: 385 LVPTYEERITRIDGIYMDKVT 405
>gi|150004301|ref|YP_001299045.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|294776888|ref|ZP_06742351.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|149932725|gb|ABR39423.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
gi|294449364|gb|EFG17901.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 468
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 181/381 (47%), Gaps = 57/381 (14%)
Query: 16 VIKILSTLLTLGLLSPQVAECRPTKNSYTIEFQALNCRKHSAV--LTDFGGV--GDGKTS 71
++ +L GL Q+ + K S IE Q V + DFG +G+
Sbjct: 5 LVSVLCICAYFGLAHAQIPQ-EIWKESEQIEKQIKKTSFPDRVYNIKDFGAKEGNNGEIL 63
Query: 72 NTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEW 131
+A N AI S+ GG ++VPPG++LTG L S+ L++ + A L S ++ +
Sbjct: 64 CHEAINLAILTCSQ---TGGGTVLVPPGEFLTGPITLKSNVNLHLEEGAYLKFSSEK--Y 118
Query: 132 PLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG--EPWW--------- 180
P + + G D LI+ +++ +TG I+GQ + WW
Sbjct: 119 LYTPTVLTRWEGVD--CYNLHPLIYAYGESNIGITG-KGIIDGQASNDNWWSMCGAPHYG 175
Query: 181 -------------------------IKYRKKQF-NVTRPYLIEVMFSDNVQISNLTLIDS 214
I R+ F + RP LI + + + I N+TL +S
Sbjct: 176 WKEGMTAQKNGGRDKLLMYAETFAPIDKRQMTFEDGLRPQLINLYRCNTILIENVTLKNS 235
Query: 215 PSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGW 274
P W +HP++ ++ ++G+ + + PN+DG +P+S N IE+ +GDDC+A+KSG
Sbjct: 236 PFWVIHPLFCESLTVRGVKVSS--HGPNSDGCDPESSKNVLIENCIFDTGDDCIAIKSGR 293
Query: 275 DEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRAED--ITAINTQSGVR 331
+ G K +P++++I+R C D + +GSE+SGG K++ E+ + + N + +R
Sbjct: 294 NADGRKWNVPSENIIVRN--CEMKDGHGGVVVGSEISGGYKNLFVENCKMDSPNLERVIR 351
Query: 332 IKTAVGRGAYVKEIYVRRMTM 352
IKT RG ++ IYVR + +
Sbjct: 352 IKTNNCRGGVIENIYVRNVEV 372
>gi|189463211|ref|ZP_03011996.1| hypothetical protein BACCOP_03924 [Bacteroides coprocola DSM 17136]
gi|189430190|gb|EDU99174.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 431
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 183/407 (44%), Gaps = 58/407 (14%)
Query: 58 VLTDFGGVGDGKTS-NTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYI 116
V+TD+ +GK S T A N AI S + GG ++VP G++LT L S+ L++
Sbjct: 19 VITDYY---NGKDSLYTDAINRAIEACS---SQGGGTVLVPDGEFLTAPIRLKSNVNLHL 72
Query: 117 HKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG 176
+L + D + L + + G D S LI+ ++ +TG ++GQ
Sbjct: 73 SDSTILKFTTD---YNLFETVLTRIEGID--CHNISPLIYAYGENNIAITG-KGKLDGQA 126
Query: 177 --EPWWIKYRKK--------------------------------QFNVTRPYLIEVMFSD 202
+ W+ + R + + N RP I +
Sbjct: 127 STDNWFAEQRIRGIKAENGETVNEKTLLYQMKADSIPVKERVFEKANGIRPQFINLYKCK 186
Query: 203 NVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIV 262
N+ + T+ SP W +HP+ S NV I+G+ +++ PN DG +P+SC N IED
Sbjct: 187 NILLEGFTINRSPFWLIHPLLSENVTIKGVKMQS--HGPNNDGCDPESCENVLIEDCDFD 244
Query: 263 SGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRAED- 320
+GDDC+A+KSG DE G +P +++I+R C D A +A+GSE++GG +V E+
Sbjct: 245 TGDDCIAIKSGRDEDGRYWNIPCKNIIVRE--CRMKDGHAGVAIGSEITGGCHNVWVENC 302
Query: 321 -ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALP 379
+ + +RIK+ RG V ++VR +T+ K H D G LP
Sbjct: 303 RMDSPELDRIIRIKSNPMRGGNVANVFVRNITVGECKQSILGIEQKYWHVDEG---PYLP 359
Query: 380 TVTGINYRDMVADNVTQSAKLDGIRN-DPFTGICISNVTIKLTEKPK 425
I+ ++ + LDG + I + + + + EKP+
Sbjct: 360 LFENIHLENITSKKSQYVLHLDGFDDKSQIRNIYLKDCSFEGVEKPE 406
>gi|315570530|gb|ADU33269.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 395
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 179/397 (45%), Gaps = 21/397 (5%)
Query: 44 TIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLT 103
TI+ ++ +T +G G+ +T A AI++ + GG + PPG++LT
Sbjct: 7 TIQLLVISAVSAIHDVTKYGADRTGRVPSTDAIARAINDAETH---GGGLVHFPPGRYLT 63
Query: 104 GSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDV 163
G L S+ + + ++ D + +P L G+ R P F+ LI +V
Sbjct: 64 GPIELKSNMIMDVGDGTIITFLDDPALYPPLHGKLPDGQRRILP---FTPLIRAWGQKNV 120
Query: 164 VVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVY 223
+ GN +G+GE WW + TRP I NV + T+ SP +NV+ +Y
Sbjct: 121 GIR-GNVIFDGRGEVWWDRLPPP---ATRPIFINFFDCHNVVLKGFTIKSSPMFNVNILY 176
Query: 224 SSNVLIQGLTIRAPID----SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGI 279
S+ ++I G+ IR P PNTDGIN S I + +GDDC+A+ + W
Sbjct: 177 SNGIVIDGIRIRNPESYHGKGPNTDGINVVSVRRLHITGVDVATGDDCIAINA-WGHG-- 233
Query: 280 KVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG 339
K +PT+ ++I +S +++GS +GG++++ + T G+ IKT RG
Sbjct: 234 KERIPTEDVLIEDS-HMSIGHGGVSIGSVTAGGLRNITVRNCVFDGTTRGLLIKTNRERG 292
Query: 340 AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDP--KALPTVTGINYRDMVADNVTQS 397
+++I+ + M M++ D + D G P P V I Y ++ +
Sbjct: 293 GTIEDIHYENIVMNNMRWEGIAITDLYNDKDSGRKPIGDQTPFVRNIKYNNVRGSSKKSP 352
Query: 398 AKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNI 434
L G+ P I I N I+ +++P N N+
Sbjct: 353 IMLIGLPEAPVENIEIENCDIR-SKRPNFQLQNTRNV 388
>gi|383315603|ref|YP_005376445.1| endopolygalacturonase [Frateuria aurantia DSM 6220]
gi|379042707|gb|AFC84763.1| endopolygalacturonase [Frateuria aurantia DSM 6220]
Length = 441
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 173/361 (47%), Gaps = 41/361 (11%)
Query: 83 LSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGR 142
+ + +A GG QL + G ++T L S L++ A+L + + P+Y
Sbjct: 58 IDRCSAKGGGQLRLAAGVFMTAPLALRSGVDLHLDAGAVLRGVAGQQHY-----RPAY-- 110
Query: 143 GRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQF-------------- 188
+ P RF + G + V G +I+G G+ WW + ++ +
Sbjct: 111 -MNWPY-RFGEALLGMDGVRHVRISGEGSIDGFGQQWWPQAQQARLTGEKQTLALGIPAS 168
Query: 189 -NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGIN 247
+ RP+LIE+ S +V+I + +I++P WN+ YS ++ I+G++I P DSPNTDGI+
Sbjct: 169 NGLPRPWLIEIHRSADVRIEGVHIINAPMWNLVTRYSHDIDIRGVSILNPADSPNTDGID 228
Query: 248 PDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGI----KVGMPTQHLIIRRLICISPDSAAI 303
+ + RI D+ I +GDDC+A+KSG + V + HL + R +
Sbjct: 229 VVASRHVRIRDSRISTGDDCIAIKSGLPGSRLPAEATVDVRIDHLWLGR-------GHGL 281
Query: 304 ALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTG 363
++GSE GI+ V D+ T +GVRIK+ RG + +I+ R + MK + +
Sbjct: 282 SVGSETLFGIRGVDVRDVVFQGTDAGVRIKSGRDRGNRISDIHFRHLRMKGVGTAISVLA 341
Query: 364 DYGSHPDPGFDPKAL-----PTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
Y P P DP P ++ ++ D+ A+ + L G+ P GI + ++++
Sbjct: 342 YY-PKPAPEQDPAQAVTATTPWISDVSVTDVQAEGSRVAGLLIGLPESPLRGIRLGHLSL 400
Query: 419 K 419
+
Sbjct: 401 Q 401
>gi|282601137|ref|ZP_05980861.2| glycoside hydrolase, family 77 [Subdoligranulum variabile DSM
15176]
gi|282569962|gb|EFB75497.1| polygalacturonase (pectinase) [Subdoligranulum variabile DSM 15176]
Length = 531
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/330 (31%), Positives = 154/330 (46%), Gaps = 47/330 (14%)
Query: 53 RKHSAVLTD--FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTS 110
KH +T+ + GDG T NT A AI A G + +P G +LTG+ L S
Sbjct: 111 EKHRINVTEAPYWAKGDGITKNTAALQRAID-----ACGPGDAVYLPAGTYLTGALQLHS 165
Query: 111 HFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIF--------GTNLTD 162
LY+ + A+L + ++ P +PS G + +SSL+ G N +
Sbjct: 166 DMELYLEEGAVLQGTAQLVDYQ--PRIPSRFEGIERRC--YSSLLNLGKMDHDDGYNCVN 221
Query: 163 VVVTGGNATINGQG----------EPWWIK-YRKKQFNVT-------------RPYLIEV 198
VV+ G TI G G E +K Y + ++ RP L+ +
Sbjct: 222 VVIRG-KGTIAGGGKALADAIIADEREHLKDYLAEHLDLVESCDEEDTIPGRVRPRLVNL 280
Query: 199 MFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIED 258
NV IS LTL DSPSW + +YS N++ + N DG +PDS TN +
Sbjct: 281 SNCQNVWISGLTLKDSPSWILQMIYSDNIVTDHCAFHSE-GIWNGDGWDPDSSTNCTLFA 339
Query: 259 NYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRA 318
+ + +GDD VA+KSG + G +G P+ H+ I C + +GSEMSGG++DV+
Sbjct: 340 SELYTGDDSVAIKSGKNPEGNAIGRPSAHIYI--FDCRVGSGQGLCIGSEMSGGVEDVQI 397
Query: 319 EDITAINTQSGVRIKTAVGRGAYVKEIYVR 348
D N+ SG+ IK RG YV+ + VR
Sbjct: 398 WDCDLENSFSGLEIKATAKRGGYVRGVTVR 427
>gi|451341085|ref|ZP_21911561.1| Polygalacturonase [Amycolatopsis azurea DSM 43854]
gi|449416100|gb|EMD21877.1| Polygalacturonase [Amycolatopsis azurea DSM 43854]
Length = 451
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 154/326 (47%), Gaps = 31/326 (9%)
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDA 120
DFG GDGKT N+ A I + A GG ++VP G ++TG+ L S+ L++ A
Sbjct: 59 DFGAKGDGKTDNSAAIKKTIETAN---ARGGGHVVVPKGTFVTGAVYLKSNVDLHLDAGA 115
Query: 121 LLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW 180
+L D S++P + R S +I+ +D+ VTG T++ W
Sbjct: 116 VLKFGSDASKFPNV-----LTRYEGIECVNRSPMIYAYKESDIAVTG-RGTLDAADTASW 169
Query: 181 IKYRKKQF--------------------NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVH 220
K + +++ + R +E D V I +TL + W +H
Sbjct: 170 NKGKDREYLESLVAKGVPPEKRIVPGSGHAMRSTFVEPYACDTVLIQGVTLKNPVFWQLH 229
Query: 221 PVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIK 280
P NV I G+ A NTD +P+SC + I ++++ + DD +A+K+G D G +
Sbjct: 230 PTLCRNVTIDGVRTDASTAHSNTDACDPESCDHVVIVNSHLGAHDDNIALKAGRDADGRR 289
Query: 281 VGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAI-NTQSGVRIKTAVGRG 339
VG+P +++++ + + + AI GSE +GGI DV A +T T+ + +K+ RG
Sbjct: 290 VGVPCRNIVVANCV-MDGNWGAITCGSEQTGGISDVYAYKLTVTGETKYALYVKSNTLRG 348
Query: 340 AYVKEIYVRRMTMKTMKYVFWMTGDY 365
+ + + + R++ + ++ DY
Sbjct: 349 GFTENVNLDRVSGTFARSFAYVLPDY 374
>gi|237712628|ref|ZP_04543109.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229453949|gb|EEO59670.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 478
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 193/397 (48%), Gaps = 33/397 (8%)
Query: 25 TLGLLSPQVAECRPTKNSYTIEFQAL---------NCRKHSAVLTDFGGVGDGKTSNTKA 75
T G L P A + TI+ +A N R+++ + ++G G+G +
Sbjct: 52 TDGTLQPINATIVNNRTRLTIKLEAWESKLISIGKNNREYN--IKEYGVKGNGYSETA-- 107
Query: 76 FNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLP 135
T +++ A +GG +++P G++L+G+ L I K+A L+++ D +E+P++P
Sbjct: 108 --TLQRIINEAAHNGGGTIVIPAGEYLSGALFFPRGVDLRIEKNAKLISTVDPNEFPVIP 165
Query: 136 PLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQF-NVTRPY 194
+ G ++ R+ + +D V G I+G+G W +K F N RP
Sbjct: 166 ---TRFEGIEK---RWRCAFLNFDHSDGVKVYGEGVIDGKGVEW----KKIPFGNSGRPR 215
Query: 195 LIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNT 254
L+ +IS L +I+ SW +H +Y++ I G+ IRA P++DGI+ DS +
Sbjct: 216 LLCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRALEYIPSSDGIDIDSSNDI 275
Query: 255 RIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIK 314
I I + DDC+++KSG DE G +VG P+++++I + +A+GSE+SG I+
Sbjct: 276 LITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENC-HFAYGHGGVAMGSEISGDIR 334
Query: 315 DVRAEDITAINTQ-SGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPD--P 371
+V N S +R K+ RG V+ I + +K + +F + ++ P P
Sbjct: 335 NVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDIIIKGARSIFDINMEWRMVPPLLP 394
Query: 372 GFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPF 408
P L + I+++++ + + + G + PF
Sbjct: 395 AHYP--LTCLRNIHFKNINGE-AQSAGTMYGFKEAPF 428
>gi|339022449|ref|ZP_08646391.1| glycoside hydrolase family 28 [Acetobacter tropicalis NBRC 101654]
gi|338750533|dbj|GAA09695.1| glycoside hydrolase family 28 [Acetobacter tropicalis NBRC 101654]
Length = 438
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 189/426 (44%), Gaps = 65/426 (15%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
+G DG+T++ A AI+ S+ GG + + G WL+G +L +H TL + + +
Sbjct: 17 YGARHDGRTNDGPAIQRAITACSEA---GGGMVSLTSGTWLSGPLSLKNHVTLNLGQGST 73
Query: 122 LLASQDES--EWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP- 178
LL S D W L G+ +PG +L+ ++ DV +TG I+G G
Sbjct: 74 LLGSSDTRLFHWAFL------GKAA-QPG---EALVSAIDVQDVAITG-QGHIDGNGAAV 122
Query: 179 WW---IKYRKKQFN-----------------VTRPYLIEVMFSDNVQISNLTLIDSPSWN 218
WW ++ K Q + + RP+LIE + +IS +T +SP W
Sbjct: 123 WWPQAVRAHKTQTSGPLPYGPDYPGVPAANGLPRPWLIEFSHVQHGRISGVTATNSPMWT 182
Query: 219 VHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYG 278
V SS + I LTIR P S NTDGI+ S + + I +GDD +A+KSG + G
Sbjct: 183 VVVRESSQIKIDHLTIRNPASSRNTDGIDLVSSDHVTMSTLDIATGDDNIAIKSGLRQPG 242
Query: 279 IKVGMPTQHLIIRRLICISP----DSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKT 334
V I I+ + +++GSE++ G +R D++ NT SG+RIK+
Sbjct: 243 RAVSD----------ISITQSRFGEGHGLSIGSELANGAHHIRISDVSFQNTLSGLRIKS 292
Query: 335 AVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPD------PGFDPKA-----LPTVTG 383
RG + I + M ++ ++ Y P DP A P +
Sbjct: 293 GRDRGGDIGWISAEHVMMNHVRAPLSISDYYAGQPGGTQKTVSMTDPAAPVTSTTPHIHD 352
Query: 384 INYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTP 443
+ D+ A N + + G+ P G+ + N I+L+ + K LQ++ + + S
Sbjct: 353 VTITDLTAKNAETAGVVLGLPEAPIEGLTLRN--IRLSAR-KGLQFSHVSGRASESTFAV 409
Query: 444 QACELL 449
Q +L
Sbjct: 410 QTAPVL 415
>gi|414344702|ref|YP_006986194.1| glycoside hydrolase family protein [Gluconobacter oxydans H24]
gi|411030009|gb|AFW03263.1| glycoside hydrolase family 28 [Gluconobacter oxydans H24]
Length = 477
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 186/417 (44%), Gaps = 67/417 (16%)
Query: 67 DGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQ 126
DG+T++ A AI+ S+ GG + + G WL+G +L +H TL + K + LL S
Sbjct: 61 DGRTNDGPAIQRAITACSEA---GGGVVSLASGIWLSGPLSLKNHVTLNLEKGSTLLGSS 117
Query: 127 DES--EWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP-WW--- 180
D W L G+ +PG +L+ ++ DV +TG I+G G WW
Sbjct: 118 DTRLFHWAFL------GKAA-QPG---EALVSAIDVQDVAITG-QGHIDGNGAAVWWPQA 166
Query: 181 IKYRKKQFN-----------------VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVY 223
++ K Q + + RP+LIE + +IS +T +SP W V
Sbjct: 167 VRAHKTQTSGPLPYGPDYPGVPAANGLPRPWLIEFSHVQHGRISGVTATNSPMWTVVVRE 226
Query: 224 SSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGM 283
SS + I LTIR P S NTDGI+ S + + + I +GDD +A+KSG + G
Sbjct: 227 SSQIRIDHLTIRNPASSRNTDGIDLVSSDHVTMSNLEIATGDDNIAIKSGLTQPGQAASD 286
Query: 284 PTQHLIIRRLICISP----DSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG 339
I I+ + +++GSE++ G +R D++ NT SG+RIK+ RG
Sbjct: 287 ----------ISITQSRFGEGHGLSIGSELANGAHHIRISDVSFQNTLSGLRIKSGRDRG 336
Query: 340 AYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKAL------------PTVTGINYR 387
+ I +TM ++ ++ Y P G AL P + +
Sbjct: 337 GDIGWISAEHLTMDHVRVPLSISDYYAGQPG-GTQQTALMTEPAAPVTSTTPHIHDVTIT 395
Query: 388 DMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQ 444
DM A N + G+ P G+ + +V +L+ + K LQ + + + S +T Q
Sbjct: 396 DMTATNAGTVGVVLGLPEAPIEGLTLRHV--RLSAR-KGLQLSHVSGRSFESTLTVQ 449
>gi|423239843|ref|ZP_17220958.1| hypothetical protein HMPREF1065_01581 [Bacteroides dorei CL03T12C01]
gi|392645468|gb|EIY39195.1| hypothetical protein HMPREF1065_01581 [Bacteroides dorei CL03T12C01]
Length = 1095
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 198/400 (49%), Gaps = 39/400 (9%)
Query: 25 TLGLLSPQVAECRPTKNSYTIEFQAL---------NCRKHSAVLTDFGGVGDGKTSNTKA 75
T G L P A + TI+ +A N R+++ + ++G G+G +
Sbjct: 669 TDGTLQPINATIVNNRTRLTIQLEAWESKLISIGKNNREYN--IKEYGVKGNGYSETA-- 724
Query: 76 FNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLP 135
T +++ A +GG +++P G++L+G+ L I K+A L+++ D +E+P++P
Sbjct: 725 --TLQRIINEAAHNGGGTIVIPAGEYLSGALFFPRGVDLRIEKNAKLISTVDPNEFPVIP 782
Query: 136 PLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQF-NVTRPY 194
+ G ++ R+ + +D V G I+G+G W +K F N RP
Sbjct: 783 ---TRFEGIEK---RWRCAFLNFDHSDGVKVYGEGVIDGKGVEW----KKIPFGNSGRPR 832
Query: 195 LIEVMFSD--NVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCT 252
L V F+D +IS L +I+ SW +H +Y++ I G+ IRA P++DGI+ DS
Sbjct: 833 L--VCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRALEYIPSSDGIDIDSSN 890
Query: 253 NTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGG 312
+ I I + DDC+++KSG DE G +VG P+++++I + +A+GSE+SG
Sbjct: 891 DILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENC-HFAYGHGGVAMGSEISGD 949
Query: 313 IKDVRAEDITAINTQ-SGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPD- 370
I++V N S +R K+ RG V+ I + +K + +F + ++ P
Sbjct: 950 IRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDIIIKGARSIFDINMEWRMVPPL 1009
Query: 371 -PGFDPKALPTVTGINYRDMVADNVTQSA-KLDGIRNDPF 408
P P L + I+++++ + QSA + G + PF
Sbjct: 1010 LPAHYP--LTCLRNIHFKNINGE--AQSAGTMYGFKEAPF 1045
>gi|295086705|emb|CBK68228.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 460
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 175/381 (45%), Gaps = 58/381 (15%)
Query: 58 VLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
++TD+G G+ +NTKA AI K GG +++VP G WLTG + S+ LY+
Sbjct: 53 LITDYGAKNGGEVNNTKAIAAAIEACHK---SGGGRVVVPAGIWLTGPIHFKSNVNLYLE 109
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
++A+L + + S++ LP + + G + +S L++ +V +T G T+ + +
Sbjct: 110 ENAILNFTDNPSDY--LPAVMTSWEGLE--CYNYSPLLYAFECENVAIT-GKGTLQPKMD 164
Query: 178 PWWIKYRKKQ---------------------------FNVTRPYLIEVMFSDNVQISNLT 210
W + +++ Q N RP+LI NV +
Sbjct: 165 TWKVWFKRPQPHLEALKELYTKASTDVPVIERQMAVGENHLRPHLIHFNRCKNVLLDGFK 224
Query: 211 LIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAV 270
+ +SP W +H L++ L ++A D N DGI+ + N +ED GDD V +
Sbjct: 225 IRESPFWTIHLYMCDGGLVRNLDVKAHGD--NNDGIDFEMSRNFLVEDCSFDQGDDAVVI 282
Query: 271 KSGWDEYGIKVGMPTQHLIIRRLIC-ISPDSAAIALGSEMSGGIKDVRAEDITAINTQSG 329
K+G ++ ++ P ++++IR C I + +GSE+SGGI+++ D TA N+
Sbjct: 283 KAGRNQDAWRLNTPCENIVIRN--CQILKGHTLLGIGSEISGGIRNIYMHDCTAPNSVMR 340
Query: 330 V-RIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRD 388
+ +KT RG +++ +Y++ + T + V + T ++D
Sbjct: 341 LFFVKTNHRRGGFIENVYMKNVQAGTAQRVL-----------------EIDTEVLYQWKD 383
Query: 389 MVADNVTQSAKLDGIRNDPFT 409
+V + ++DGI D T
Sbjct: 384 LVPTYEERITRIDGIYMDKVT 404
>gi|265752310|ref|ZP_06088103.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263237102|gb|EEZ22572.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 1095
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 198/400 (49%), Gaps = 39/400 (9%)
Query: 25 TLGLLSPQVAECRPTKNSYTIEFQAL---------NCRKHSAVLTDFGGVGDGKTSNTKA 75
T G L P A + TI+ +A N R+++ + ++G G+G +
Sbjct: 669 TDGTLQPINATIVNNRTRLTIKLEAWESKLISIGKNNREYN--IKEYGVKGNGYSETA-- 724
Query: 76 FNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLP 135
T +++ A +GG +++P G++L+G+ L I K+A L+++ D +E+P++P
Sbjct: 725 --TLQRIINEAAHNGGGTIVIPAGEYLSGALFFPRGVDLRIEKNAKLISTVDPNEFPVIP 782
Query: 136 PLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQF-NVTRPY 194
+ G ++ R+ + +D V G I+G+G W +K F N RP
Sbjct: 783 ---TRFEGIEK---RWRCAFLNFDHSDGVKVYGEGVIDGKGVEW----KKIPFGNSGRPR 832
Query: 195 LIEVMFSD--NVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCT 252
L V F+D +IS L +I+ SW +H +Y++ I G+ IRA P++DGI+ DS
Sbjct: 833 L--VCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRALEYIPSSDGIDIDSSN 890
Query: 253 NTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGG 312
+ I I + DDC+++KSG DE G +VG P+++++I + +A+GSE+SG
Sbjct: 891 DILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENC-HFAYGHGGVAMGSEISGD 949
Query: 313 IKDVRAEDITAINTQ-SGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPD- 370
I++V N S +R K+ RG V+ I + +K + +F + ++ P
Sbjct: 950 IRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDIIIKGARSIFDINMEWRMVPPL 1009
Query: 371 -PGFDPKALPTVTGINYRDMVADNVTQSA-KLDGIRNDPF 408
P P L + I+++++ + QSA + G + PF
Sbjct: 1010 LPAHYP--LTCLRNIHFKNINGE--AQSAGTMYGFKETPF 1045
>gi|116619802|ref|YP_821958.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222964|gb|ABJ81673.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 535
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 174/410 (42%), Gaps = 69/410 (16%)
Query: 54 KHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFT 113
+H +L D+G DG T AF AI + VP GK+ TG L S+
Sbjct: 26 EHFNIL-DYGAKNDGSAPATGAFRAAIQAAKAAGG---GTVFVPAGKYTTGPIELVSNLV 81
Query: 114 LYIHKDALL--------LASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVV 165
LY A++ + L P+P LI G+NL +V V
Sbjct: 82 LYFDAGAVVEFPAQRLPFVKSRQQSIEALTPVP---------------LIGGSNLENVTV 126
Query: 166 TGGNATINGQGEPWWIKYRKKQFNVT---------------------------------- 191
G + E W +K +Q T
Sbjct: 127 -AGRGVLKSNNEDW-MKLMPRQKATTADPGSANGPNWEKLLTMLEVKTPAPEAAYLAAAP 184
Query: 192 --RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPD 249
RP + M S NV I L + SP W +H +YS NV+++ + I +TDGI D
Sbjct: 185 ELRPSFVRTMESRNVLIEGLQFVGSPMWTIHLLYSDNVVVRDVIIET-YPGVHTDGIAVD 243
Query: 250 SCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEM 309
S N RI + YI +GDD + +K+G D G++V PT+++ I + A+ +GSE
Sbjct: 244 SSRNVRISNCYIDTGDDGIVIKAGKDSDGLRVNRPTENVSITNC-SVHHAHGAVTIGSET 302
Query: 310 SGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHP 369
SG ++++ A +IT TQ GVRIK+ GRG V+++ TM+ + +T Y
Sbjct: 303 SGWVRNLVASNITCDGTQMGVRIKSRRGRGGGVEDVRFDNWTMENVGTAVNITNYYLMEG 362
Query: 370 D-PGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
+ P DP+ + T + +R++ N+T + I + + +SN+ I
Sbjct: 363 EKPANDPEPVSNRTPV-FRNIAISNMTVNHARVAIDIEGLPEMNVSNLRI 411
>gi|423229002|ref|ZP_17215407.1| hypothetical protein HMPREF1063_01227 [Bacteroides dorei CL02T00C15]
gi|423244841|ref|ZP_17225915.1| hypothetical protein HMPREF1064_02121 [Bacteroides dorei CL02T12C06]
gi|392634755|gb|EIY28667.1| hypothetical protein HMPREF1063_01227 [Bacteroides dorei CL02T00C15]
gi|392641228|gb|EIY35012.1| hypothetical protein HMPREF1064_02121 [Bacteroides dorei CL02T12C06]
Length = 1095
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 198/400 (49%), Gaps = 39/400 (9%)
Query: 25 TLGLLSPQVAECRPTKNSYTIEFQAL---------NCRKHSAVLTDFGGVGDGKTSNTKA 75
T G L P A + TI+ +A N R+++ + ++G G+G +
Sbjct: 669 TDGTLQPINATIVNNRTRLTIQLEAWESKLISIGKNNREYN--IKEYGVKGNGYSETA-- 724
Query: 76 FNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLP 135
T +++ A +GG +++P G++L+G+ L I K+A L+++ D +E+P++P
Sbjct: 725 --TLQRIINEAAHNGGGTIVIPAGEYLSGALFFPRGVDLRIEKNAKLISTVDPNEFPVIP 782
Query: 136 PLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQF-NVTRPY 194
+ G ++ R+ + +D V G I+G+G W +K F N RP
Sbjct: 783 ---TRFEGIEK---RWRCAFLNFDHSDGVKVYGEGVIDGKGVEW----KKIPFGNSGRPR 832
Query: 195 LIEVMFSD--NVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCT 252
L V F+D +IS L +I+ SW +H +Y++ I G+ IRA P++DGI+ DS
Sbjct: 833 L--VCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRALEYIPSSDGIDIDSSN 890
Query: 253 NTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGG 312
+ I I + DDC+++KSG DE G +VG P+++++I + +A+GSE+SG
Sbjct: 891 DILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENC-HFAYGHGGVAMGSEISGD 949
Query: 313 IKDVRAEDITAINTQ-SGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPD- 370
I++V N S +R K+ RG V+ I + +K + +F + ++ P
Sbjct: 950 IRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDIIIKGARSIFDINMEWRMVPPL 1009
Query: 371 -PGFDPKALPTVTGINYRDMVADNVTQSA-KLDGIRNDPF 408
P P L + I+++++ + QSA + G + PF
Sbjct: 1010 LPAHYP--LTCLRNIHFKNINGE--AQSAGTMYGFKEAPF 1045
>gi|408369670|ref|ZP_11167450.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407744724|gb|EKF56291.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 454
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 185/400 (46%), Gaps = 60/400 (15%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+TD+G + + + + ++A AI + A GG ++++P G+WLTG +L S+ L++ +
Sbjct: 54 ITDYGALPNDQKATSRAIMDAIK---EAHAQGGGRVVIPKGEWLTGKIHLKSNINLHLEQ 110
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A+LL S + ++ LP + S G + +S LI+ ++ +T G + + +
Sbjct: 111 GAVLLFSDNPQDY--LPAVHSSWEGLE--CFNYSPLIYAYKCKNIAIT-GQGELKAKMDT 165
Query: 179 W--WIK------------YRKKQFNV-------------TRPYLIEVMFSDNVQISNLTL 211
W W Y NV RP I+ S+N+ + +T+
Sbjct: 166 WRSWFDRPPGHMNSLKELYHMAANNVPVEQRQMVNDSANLRPQFIQFNRSENILLQGVTI 225
Query: 212 IDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVK 271
+SP W +HP S NV I+ +T+ A N DG++P+ N IE+ GDD +AVK
Sbjct: 226 TNSPFWVIHPYLSKNVSIKEVTVFA--HGHNNDGVDPEMSQNIIIENCTFDQGDDAIAVK 283
Query: 272 SGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVR 331
SG ++ ++ P ++++I+ I+ +A+GSE+SGGI+++ ++ + G +
Sbjct: 284 SGRNQDAWRLATPAKNIVIKNCKIIN-GHQLMAIGSELSGGIENIY---MSNCQVEQGAK 339
Query: 332 ------IKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFD--------PKA 377
IKT RG V IY M +++ G G D + +
Sbjct: 340 LNHLLFIKTNERRGGIVSNIY-----MDSIQAGEIAEGILGIDTDVLYQWRNLVPTYQRE 394
Query: 378 LPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVT 417
L + + D+ A+NV +K+ G P + ++ VT
Sbjct: 395 LTVIKDVYLSDIHAENVAFISKISGQEQVPVKNVVLNRVT 434
>gi|212690884|ref|ZP_03299012.1| hypothetical protein BACDOR_00372 [Bacteroides dorei DSM 17855]
gi|345512466|ref|ZP_08791992.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|212666566|gb|EEB27138.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229438023|gb|EEO48100.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
Length = 1095
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 198/400 (49%), Gaps = 39/400 (9%)
Query: 25 TLGLLSPQVAECRPTKNSYTIEFQAL---------NCRKHSAVLTDFGGVGDGKTSNTKA 75
T G L P A + TI+ +A N R+++ + ++G G+G +
Sbjct: 669 TDGTLQPINATIVNNRTRLTIKLEAWESKLISIGKNNREYN--IKEYGVKGNGYSETA-- 724
Query: 76 FNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLP 135
T +++ A +GG +++P G++L+G+ L I K+A L+++ D +E+P++P
Sbjct: 725 --TLQRIINEAAHNGGGTIVIPAGEYLSGALFFPRGVDLRIEKNAKLISTVDPNEFPVIP 782
Query: 136 PLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQF-NVTRPY 194
+ G ++ R+ + +D V G I+G+G W +K F N RP
Sbjct: 783 ---TRFEGIEK---RWRCAFLNFDHSDGVKVYGEGVIDGKGVEW----KKIPFGNSGRPR 832
Query: 195 LIEVMFSD--NVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCT 252
L V F+D +IS L +I+ SW +H +Y++ I G+ IRA P++DGI+ DS
Sbjct: 833 L--VCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRALEYIPSSDGIDIDSSN 890
Query: 253 NTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGG 312
+ I I + DDC+++KSG DE G +VG P+++++I + +A+GSE+SG
Sbjct: 891 DILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENC-HFAYGHGGVAMGSEISGD 949
Query: 313 IKDVRAEDITAINTQ-SGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPD- 370
I++V N S +R K+ RG V+ I + +K + +F + ++ P
Sbjct: 950 IRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDIIIKGARSIFDINMEWRMVPPL 1009
Query: 371 -PGFDPKALPTVTGINYRDMVADNVTQSA-KLDGIRNDPF 408
P P L + I+++++ + QSA + G + PF
Sbjct: 1010 LPAHYP--LTCLRNIHFKNINGE--AQSAGTMYGFKEAPF 1045
>gi|291615877|ref|YP_003518619.1| Pgl [Pantoea ananatis LMG 20103]
gi|378769045|ref|YP_005197520.1| polygalacturonase [Pantoea ananatis LMG 5342]
gi|386018057|ref|YP_005936358.1| polygalacturonase Pgl [Pantoea ananatis AJ13355]
gi|386081132|ref|YP_005994657.1| polygalacturonase Pgl [Pantoea ananatis PA13]
gi|291150907|gb|ADD75491.1| Pgl [Pantoea ananatis LMG 20103]
gi|327396140|dbj|BAK13562.1| polygalacturonase Pgl [Pantoea ananatis AJ13355]
gi|354990313|gb|AER34437.1| polygalacturonase Pgl [Pantoea ananatis PA13]
gi|365188533|emb|CCF11483.1| polygalacturonase [Pantoea ananatis LMG 5342]
Length = 443
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 159/335 (47%), Gaps = 32/335 (9%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L DF V DG+T +T+ AI + AA GG +L +PPG++ +G NL S F L++
Sbjct: 5 LGDFHPVADGETPDTRILQQAIDQI---AAAGGGRLTLPPGRYRSGCLNLPSDFELHLEA 61
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A+L+AS+ +++ L + + L++ ++ +TG I G E
Sbjct: 62 GAVLVASRHLADYQQWKALSCAEKSHN-------VLLYALGQRNLTITG-QGHIEGDAEA 113
Query: 179 WWIKYRKKQF----NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTI 234
W+ +Q RP +I + V++ +++LI +P W VH V +V I+ LTI
Sbjct: 114 WFAAEPDEQGYRVPKADRPRMIVFEDCEQVRLQDISLIRAPMWTVHLVSCRHVHIERLTI 173
Query: 235 RAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLI 294
+ PNTD ++ DSC I ++Y + DD + +K+ + G++ P + + + +
Sbjct: 174 DNAMTLPNTDALDIDSCEAVFISNSYFSAADDAICIKTTFKPAGLR--RPARRIAVSNCL 231
Query: 295 CISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKT 354
+ DS A+ +G+E I+D+ T ++ G+ I + G GA +RR+ T
Sbjct: 232 -LRSDSCALKIGTETWDDIEDITVSGCTLFDSNRGIGIVSRDG-GA------IRRVLFST 283
Query: 355 MKY-VFWMTGDYGSHPDPGF------DPKALPTVT 382
+ + + + DP F DP LP +
Sbjct: 284 IAFSCHHVAACHWGKADPIFISVRTRDPAVLPGIV 318
>gi|427385675|ref|ZP_18881982.1| hypothetical protein HMPREF9447_03015 [Bacteroides oleiciplenus YIT
12058]
gi|425726714|gb|EKU89577.1| hypothetical protein HMPREF9447_03015 [Bacteroides oleiciplenus YIT
12058]
Length = 532
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 163/348 (46%), Gaps = 45/348 (12%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
FG V D +T A AI + A GG + + PG +LTG+ + S L I K
Sbjct: 89 FGAVADSTVLSTNAIQKAIDSC---ALSGGGTVTLQPGYYLTGALFVKSGVNLQISKGVT 145
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVV-----VTGGNATINGQG 176
L+A P + Y R G +I+ + +++ G T++ +G
Sbjct: 146 LIA---------CPDIYCYPEFRSRIAG--IEMIWPAAVINIIGEKKASVSGEGTLDCRG 194
Query: 177 EPWWIKY---RKK----------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVY 223
+ +W KY RK+ ++ R I V S ++ +SN TL+ + W +Y
Sbjct: 195 KIFWDKYWAMRKEYEAKGLRWIVDYDCKRVRGILVERSSDITLSNFTLMRTGFWGCQILY 254
Query: 224 SSNVLIQGLTIRAPI--DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKV 281
S + + GL I I P+TDGI+ DS TN IE+ I DD + +K+G D G++V
Sbjct: 255 SDHCTVDGLNIDNNIGGHGPSTDGIDIDSSTNILIENCTIDCNDDIICLKAGRDADGLRV 314
Query: 282 GMPTQHLIIRRLICISPDSAA-IALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGA 340
T++++IR C + A I GSE SG I+++ A D+ AI T +K+A+ RG
Sbjct: 315 NRSTENVLIRN--CTAHRGAGLITCGSETSGSIRNILAYDLKAIGTSVVFLLKSAMTRGG 372
Query: 341 YVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRD 388
V+ +YV R+ + ++ VF DP ++PK + Y+D
Sbjct: 373 TVENVYVTRVEAENVRQVF--------GADPNWNPKYSYSTLPEAYKD 412
>gi|86141409|ref|ZP_01059955.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
gi|85831968|gb|EAQ50423.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
Length = 453
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 186/410 (45%), Gaps = 56/410 (13%)
Query: 58 VLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
++TDFG + K NT+A AI S +A GG +++P G+WLTG + S+ L++
Sbjct: 51 LITDFGADPNNKKKNTEAIAAAID--SAHAIAGGT-VVIPKGEWLTGKIHFKSNVNLHLE 107
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
+ A LL S+D ++ LP + S G + +S LI+ ++ +T G + + +
Sbjct: 108 EGATLLFSEDPQDY--LPAVLSTWEGME--CYNYSPLIYAYECENIAIT-GKGKLKAKMD 162
Query: 178 PWWIKYR---------KKQFNVT------------------RPYLIEVMFSDNVQISNLT 210
W + + K+ + + RP I+ S ++ + +
Sbjct: 163 TWEVWFARPSGHMQNLKRLYEMASKDIPVEERQMVNDSANFRPQFIQFNRSKHILLEGIA 222
Query: 211 LIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAV 270
+ +SP W +HP SS+V+I+ + + A N DG++P+ N IE+ GDD +AV
Sbjct: 223 IENSPFWVIHPYLSSDVIIREVNVFA--HGHNNDGVDPEMSQNVLIENCVFDQGDDAIAV 280
Query: 271 KSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDV---RAEDITAINTQ 327
K+G ++ ++ P ++++IR + +A+GSE+SGG+++V E
Sbjct: 281 KAGRNQDAWRLNTPVKNIVIRDC-SVKNGHQLLAIGSELSGGVENVYMGNCEVAPNAKLN 339
Query: 328 SGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPD---------PGFDPKAL 378
+ IKT RG YVK IY M+ +K G G D P ++ + L
Sbjct: 340 HLLFIKTNERRGGYVKNIY-----MEDIKAGRIDKGILGIETDVLYQWRDLVPTYE-RRL 393
Query: 379 PTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQ 428
+ +N ++ A NV +++ G P I + VT E+
Sbjct: 394 TQIEQVNMTNIKAANVDFVSRILGEEEAPVQNISLRKVTADTIRTESEIH 443
>gi|336415463|ref|ZP_08595802.1| hypothetical protein HMPREF1017_02910 [Bacteroides ovatus
3_8_47FAA]
gi|335940342|gb|EGN02209.1| hypothetical protein HMPREF1017_02910 [Bacteroides ovatus
3_8_47FAA]
Length = 511
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 156/325 (48%), Gaps = 49/325 (15%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
FG V D +T+A AI + A GG +++ PG + TG+ + S L + K
Sbjct: 68 FGAVADSTVLSTEAIQKAIDSC---AVSGGGTVVLQPGYYQTGALFIKSGVNLQLDKGVT 124
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLT-----DVVVTGGNATINGQG 176
LLAS +P F S I G +T +V NA+I+G+G
Sbjct: 125 LLASPSIHHYP-----------------EFRSRIAGIEMTWPAAVINIVNEKNASISGEG 167
Query: 177 ------EPWWIKY---RKK----------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSW 217
+ +W KY RK+ ++ R I + S ++ + TL+ + W
Sbjct: 168 TLDCRGKVFWDKYWEMRKEYEAKGLRWIVDYDCKRVRGILIERSSDITLKGFTLMRTGFW 227
Query: 218 NVHPVYSSNVLIQGLTIRAPI--DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWD 275
+YS I GLTI I P+TDGI+ DS N +E+ + DD + +KSG D
Sbjct: 228 GCQILYSDYCTIDGLTINNNIGGHGPSTDGIDIDSSCNILVENCDVDCNDDNICIKSGRD 287
Query: 276 EYGIKVGMPTQHLIIRRLICISPDSAA-IALGSEMSGGIKDVRAEDITAINTQSGVRIKT 334
G++V +PT++++IR CI+ A I GSE SG I++V ++ AI T + +R+K+
Sbjct: 288 ADGLRVNLPTENVVIRN--CIARKGAGLITCGSETSGSIRNVLGYNLEAIGTSAVLRLKS 345
Query: 335 AVGRGAYVKEIYVRRMTMKTMKYVF 359
A+ RG ++ IY+ + + +++V
Sbjct: 346 AMNRGGTIENIYMTEVKAENVRHVL 370
>gi|399025028|ref|ZP_10727046.1| endopolygalacturonase [Chryseobacterium sp. CF314]
gi|398079129|gb|EJL70001.1| endopolygalacturonase [Chryseobacterium sp. CF314]
Length = 337
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 140/302 (46%), Gaps = 75/302 (24%)
Query: 31 PQVAECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADG 90
PQVAE N+ +I +GGV G NT+AF AI +LSK G
Sbjct: 36 PQVAETSFAANTVSI--------------IQYGGVAGGSVKNTEAFRKAIDDLSK---KG 78
Query: 91 GAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGR 150
G +L+VP G WLTG L S+ L++ + A ++ S+D++++PL+ S+ G + R
Sbjct: 79 GGKLVVPRGMWLTGPIELKSNINLHVEEGAFIIFSKDKNDYPLVDV--SF-EGLNTI--R 133
Query: 151 FSSLIFGTNLTDVVVTGGNATINGQGEPW-----------------------------WI 181
S + N T++ +TG I+G G+ W W
Sbjct: 134 CQSPVSARNATNIAITG-KGVIDGSGDAWRAIKKGKVSESEWKEITASGGILSSDGKTWY 192
Query: 182 ---KYRK-----KQFNV---------------TRPYLIEVMFSDNVQISNLTLIDSPSWN 218
Y+K FNV RP ++ ++ D V + T +SP+WN
Sbjct: 193 PSESYKKGFESSSSFNVPDRISKEELKSVKDFLRPVMVSLVGCDKVLLDGPTFQNSPAWN 252
Query: 219 VHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYG 278
+HP+ SNV+++ LT+R P S N DG++ +SC N I +N GDD + +KSG +E G
Sbjct: 253 LHPLMCSNVILKNLTVRNPWFSQNGDGVDLESCKNVLIYNNTFDVGDDAICIKSGKNEDG 312
Query: 279 IK 280
K
Sbjct: 313 RK 314
>gi|374374281|ref|ZP_09631940.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373233723|gb|EHP53517.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 465
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 202/434 (46%), Gaps = 65/434 (14%)
Query: 38 PTKNSYTIEFQALNCRKHS--------AVLTDFGGVGDGKTSNTKAFNTAISNLSKYAAD 89
P +SY+++ NC+ ++ V+T FG V + NT A AI+ +K
Sbjct: 36 PGLSSYSVKTPYGNCKINTPDFSKSKKLVITGFGAVPGDQQKNTAAIARAIATANKL--- 92
Query: 90 GGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGG 149
GG +++P G+WLTG +L S+ L++ K A LL S + ++ LP + S G +
Sbjct: 93 GGGIVVIPKGEWLTGKIHLKSNVNLHLEKGATLLFSGNPQDY--LPAVVSSWEGME--CY 148
Query: 150 RFSSLIFGTNLTDVVVTGGNATINGQ---GEPWWIKYR------KKQFNVT--------- 191
+S LI+ +V +TG T+ Q E W+ + R K+ +N+
Sbjct: 149 NYSPLIYVYECKNVAITG-EGTLKAQMATWEKWFARPRAHMESIKRLYNLAWNRAPLEQR 207
Query: 192 ---------RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPN 242
RP I+ S+N+ + +++++SP W +H S N+ ++ L + A N
Sbjct: 208 QMVNDTAHLRPQFIQFNRSENILLEGVSVVNSPFWTIHLYLSKNIRLRNLNVYA--HGHN 265
Query: 243 TDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAA 302
DG++P+ N IE+ GDD +A+KSG + G ++ P+++++IR +
Sbjct: 266 NDGVDPEMSQNVLIENCVFDQGDDAIAIKSGRNPEGWRLKTPSKNIVIRN-CTVKNGHQL 324
Query: 303 IALGSEMSGGIKDVRAEDITAIN---TQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVF 359
+A+GSE+SGGI++V + T ++ + IKT G YVK IY + +
Sbjct: 325 VAIGSELSGGIENVFIDHCTVLDGAKLNHLLFIKTNERMGGYVKNIYASNIRSGKID--- 381
Query: 360 WMTGDYGSHPD---------PGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTG 410
G G D P ++ + P + I ++ A V A++ G + P
Sbjct: 382 --LGILGIETDVLYQWRDLVPTYEKRLTP-IKDIFLTNIHASEVKFIARVLGQKALPVET 438
Query: 411 ICISNVTI-KLTEK 423
+ + NVT K+ EK
Sbjct: 439 VSLKNVTAGKVLEK 452
>gi|262408407|ref|ZP_06084954.1| pectate lyase [Bacteroides sp. 2_1_22]
gi|294646414|ref|ZP_06724057.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294807852|ref|ZP_06766636.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345508621|ref|ZP_08788247.1| pectate lyase [Bacteroides sp. D1]
gi|229445709|gb|EEO51500.1| pectate lyase [Bacteroides sp. D1]
gi|262353959|gb|EEZ03052.1| pectate lyase [Bacteroides sp. 2_1_22]
gi|292638241|gb|EFF56616.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444947|gb|EFG13630.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 460
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 174/383 (45%), Gaps = 62/383 (16%)
Query: 58 VLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
++TD+G GK +NTKA AI K GG +++VP G WLTG + S+ LY+
Sbjct: 53 LITDYGAKNGGKVNNTKAIAAAIEACHK---SGGGRVVVPAGIWLTGPIHFKSNVNLYLE 109
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
++A+L + + S++ LP + + G + +S L++ +V +T G T+ + +
Sbjct: 110 ENAILNFTDNPSDY--LPAVMTSWEGLE--CYNYSPLLYAFECENVAIT-GKGTLQPKMD 164
Query: 178 PWWIKYRKKQ---------------------------FNVTRPYLIEVMFSDNVQISNLT 210
W + +++ Q N RP+LI NV +
Sbjct: 165 TWKVWFKRPQPHLEALKELYTKASTDVPVIERQMAVGENHLRPHLIHFNRCKNVLLDGFK 224
Query: 211 LIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAV 270
+ +SP W +H L++ L ++A N DGI+ + N +ED GDD V +
Sbjct: 225 IRESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVI 282
Query: 271 KSGWDEYGIKVGMPTQHLIIRRLIC-ISPDSAAIALGSEMSGGIKDVRAEDITAINTQSG 329
K+G ++ ++ P ++++IR C I + +GSE+SGGI+++ D TA N+
Sbjct: 283 KAGRNQDAWRLNTPCENIVIRN--CQILKGHTLLGIGSEISGGIRNIYMHDCTAPNSVMR 340
Query: 330 V-RIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINY-- 386
+ +KT RG +++ +Y++ + G + L T + Y
Sbjct: 341 LFFVKTNHRRGGFIENVYMKNV-------------------QAGMAQRVLEIDTEVLYQW 381
Query: 387 RDMVADNVTQSAKLDGIRNDPFT 409
+D+V + ++DGI D T
Sbjct: 382 KDLVPTYEERITRIDGIYMDKVT 404
>gi|212695103|ref|ZP_03303231.1| hypothetical protein BACDOR_04641 [Bacteroides dorei DSM 17855]
gi|212662419|gb|EEB22993.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 532
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 148/306 (48%), Gaps = 29/306 (9%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG VGDGK+ +TKA AI +K ++VP G +LTG+ S+ TLYI +
Sbjct: 120 IKDFGAVGDGKSLDTKAIQQAIDACNKQGI-----VVVPKGVYLTGALFFKSYMTLYIEE 174
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDE--PGGRFSSLIFGTNLTDVVVTG----GNATI 172
A+L S D + +P++ R R E G +++SLI G L + G I
Sbjct: 175 GAILKGSSDLAHYPIV-------RSRFEGIEGSQYASLINGGTLLSGGIQEFSIRGKGII 227
Query: 173 NGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
+ GE I +KK+ R ++ +M +N+ + +T + SP+W VH +Y V I+ +
Sbjct: 228 DANGEN-LINQQKKEGLGYRGRILSLMNGENICLEGVTFLQSPAWGVHFIYCMGVTIKDV 286
Query: 233 TIRAPIDSP--------NTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMP 284
I D N DG+ DS + + + I S DD V++KSG D G +V
Sbjct: 287 YINTRFDPETGRKYKIHNGDGLTIDSSKDIVVYNTTISSQDDNVSIKSGRDNDGRRVAKS 346
Query: 285 TQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKE 344
T + ++ C + +GSEM+G +++V + NT ++K GRG ++
Sbjct: 347 TDN--VKLFDCKFLGGFGVVVGSEMAGNVRNVLVNNCFYENTACVSQLKAPWGRGGVIEN 404
Query: 345 IYVRRM 350
I + +
Sbjct: 405 ITFKNI 410
>gi|383641178|ref|ZP_09953584.1| glycoside hydrolase [Sphingomonas elodea ATCC 31461]
Length = 465
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 185/408 (45%), Gaps = 57/408 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+T FG GDG+T N+ A AI+ + +++VP G++LTG+ +L S+ L++
Sbjct: 48 VTRFGARGDGQTLNSTAIARAIAACAAAGG---GRVVVPAGRFLTGAVHLRSNVNLHLQA 104
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A LL S D ++PL+ + R +S L++ ++ +TG T++GQG
Sbjct: 105 GATLLFSTDPKDYPLV-----FTRWEGIELMNYSPLVYARQQRNIAITG-EGTLDGQGSA 158
Query: 179 --WW-----------------------------------IKYRKKQF---NVTRPYLIEV 198
WW + K+ F + RP ++
Sbjct: 159 RHWWSWKGPWGGTVDHGWREGMPDQRKARAILFEMAERRVPVEKRVFGEGSFLRPAFVQP 218
Query: 199 MFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIED 258
+NV I + L +P W +HPV N++++G+ + PN DG +P+S IE
Sbjct: 219 YDCENVLIEGVKLRGAPFWQIHPVLCRNLIVRGVDVLG--HGPNNDGCDPESVDGALIER 276
Query: 259 NYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRA 318
+GDDC+A+ SG +E G ++ MP Q+++IR + + +GS++SGG + + A
Sbjct: 277 CTFDTGDDCIAINSGRNEDGRRLAMPAQNILIRDCR-MKEGHGGVVVGSQISGGARWIFA 335
Query: 319 ED--ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPK 376
E + + + +R K RG ++ + R + + T+ +T D+ + + G + +
Sbjct: 336 ERCVMDSPDLWYAIRFKNNALRGGLLENFFYRDIDVGTVSRAA-VTCDF--NYEEGANGR 392
Query: 377 ALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKP 424
+P + + + N + G+ P TG+ + + + +P
Sbjct: 393 FVPRLRNVVIERLRTKNAARVLDSQGLPGAPVTGVTLRDCSFDGVTQP 440
>gi|299144965|ref|ZP_07038033.1| conserved hypothetical protein [Bacteroides sp. 3_1_23]
gi|336412843|ref|ZP_08593196.1| hypothetical protein HMPREF1017_00304 [Bacteroides ovatus
3_8_47FAA]
gi|298515456|gb|EFI39337.1| conserved hypothetical protein [Bacteroides sp. 3_1_23]
gi|335942889|gb|EGN04731.1| hypothetical protein HMPREF1017_00304 [Bacteroides ovatus
3_8_47FAA]
Length = 527
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 162/371 (43%), Gaps = 51/371 (13%)
Query: 90 GGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWP-----LLPPLPSYGRGR 144
GG +++P GKW +G L S+ L++ +A E E+P LP + + G
Sbjct: 87 GGGTVVIPKGKWKSGRIVLKSNVNLHLEDEA-------EIEFPGTVESYLPAVFTRHEGI 139
Query: 145 DEPGGRFSSLIFGTNLTDVVVTG------------------GNATINGQ-------GEPW 179
+ G + I+ ++ VTG GN + +
Sbjct: 140 EIMGA--GAFIYANGENNIAVTGKGIIYGPAMNAEIRQLPNGNTVVENDISSTTPVAQRI 197
Query: 180 WIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPID 239
+ + F RP I + NV + +T+ S WN+ P+Y NV+I+G+T+ + I
Sbjct: 198 FDGMNGRGF--YRPKTISPINCTNVLVEGITMERSAFWNICPIYCENVIIRGITVNS-IG 254
Query: 240 SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPD 299
P+ DGI+ +SC N IE + + GDDC +K+G E G++VG T++++IR +
Sbjct: 255 VPSGDGIDIESCKNVLIEYSTLNCGDDCFTLKAGRAEDGLRVGKATENVVIRYSLA-KDG 313
Query: 300 SAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVF 359
I GSE +GGI+++ D TQ G+R KT R V +I + M + F
Sbjct: 314 HGGITCGSETAGGIENIYLHDCVFDGTQVGIRFKTRRNRAGGVSDILYENIRMTNVGEAF 373
Query: 360 -W-------MTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGI 411
W G+ S P + P + I R+ + ++ + ++GI P + I
Sbjct: 374 KWDLLGSKRYMGELASRIPPRAVNRLTPVIKDIKIRNFIVESAHKVLSINGIPEVPCSNI 433
Query: 412 CISNVTIKLTE 422
I N I E
Sbjct: 434 LIENGKINSQE 444
>gi|431753628|ref|ZP_19542297.1| glycosyl hydrolase [Enterococcus faecium E2620]
gi|430611661|gb|ELB48738.1| glycosyl hydrolase [Enterococcus faecium E2620]
Length = 436
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 175/385 (45%), Gaps = 45/385 (11%)
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQ---LIVPPGKWLTGSFNLTSHFTLYIH 117
+F D KT++ + +T + L K G + + +P G +L G+ L L
Sbjct: 6 EFINALDFKTNDIQQDDTVM--LQKAINQGAKEHSPVFIPEGIYLVGALFLKDKSHLIFE 63
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
+ A+L + ++E P + + G + ++ + I ++ G I+GQGE
Sbjct: 64 EGAVL---KGKTEIEAFPEIDTRVAGVEM---KWPAAILNVLSAKHILIEGKGIIDGQGE 117
Query: 178 PWWIKYRKKQ-------------------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWN 218
WW Y K + + RP + +++V I +L S WN
Sbjct: 118 HWWELYWGKDQKSGTRAEYDRKGLCWIADYAIKRPRACLLYHAEHVVIRDLIFQKSGFWN 177
Query: 219 VHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYG 278
+ YS++VL++ + IR D P+TDGI+ DS T+ RI + + GDDC+A+KSG D G
Sbjct: 178 LQITYSNDVLVEKIIIRHN-DGPSTDGIDIDSSTDVRIYECDLACGDDCIAIKSGRDGNG 236
Query: 279 IKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGR 338
+V + + I R C + +GSE+S G+ DV DI + G+R+K++ R
Sbjct: 237 ARVNRKSSRIEIAR--CNIRSGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSRER 294
Query: 339 GAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDP--GFDPKALPTVTGINYRDMVADNVTQ 396
G ++ I V + M +++ F D+ + + D + +P VA+ + +
Sbjct: 295 GGVIENIRVENLNMMDVQFPFSWIMDWHNEYNRKNSNDLERMPESW-----QAVAEEIPE 349
Query: 397 SAKLDGIRNDPFTGICISNVTIKLT 421
S ++ +RN I + NV L+
Sbjct: 350 SKQMTKVRN-----IHVKNVQASLS 369
>gi|322436856|ref|YP_004219068.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321164583|gb|ADW70288.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 414
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 187/400 (46%), Gaps = 56/400 (14%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
G GDG T +T+A AI + GG K+L+G + S TL + A+
Sbjct: 28 MGAKGDGVTKDTEAIQKAIDTCTVVTLSGG--------KFLSGPLEIKSGVTLDVETGAM 79
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWI 181
LL S D +++ + R F ++ N +V +TGG TI+GQG+ WW
Sbjct: 80 LLGSTDRADYKAATLM------RQPTVLPFLHIV---NADNVKITGG-GTIDGQGKVWW- 128
Query: 182 KYRKKQFNVT-------RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTI 234
Y K + RP + + S +V + N+T+ ++ W V P YS ++ L +
Sbjct: 129 DYVKGAKDAGVLGNDHPRPMGLLIDHSKHVTVENITIQNAGFWQVVPYYSDYLVFSHLRV 188
Query: 235 RAPI-DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGW-DEYGIKVGMPTQHLIIRR 292
AP +PNTDGI+P S ++ +I+ + GDD +A+KSG + G P++ ++I
Sbjct: 189 LAPQRGAPNTDGIDPFSSSHIKIDHYFSSVGDDNIAIKSGAINSPGPDA--PSEDIVITD 246
Query: 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
CI +++GSE++GG+ V AE I+ T G+R+K RG ++ + +TM
Sbjct: 247 --CIFESGHGLSIGSEIAGGVHHVHAERISFKGTDQGIRVKANRDRGNDTSDLTFKDITM 304
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALP---------TVTGINYRDMVADNVTQ-----SA 398
++ ++ Y PKA+P T ++ D+ +NV +
Sbjct: 305 DDVRTSILISEYY---------PKAMPEGEVASAPITRLTPHFHDIHIENVKSVNSDWAG 355
Query: 399 KLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGIT 438
+ G+ P T I + NV+I+ +K ++ + + G+T
Sbjct: 356 VIVGLPESPVTDISLKNVSIQ-AKKGMQIGYANVTLDGVT 394
>gi|293379024|ref|ZP_06625177.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|292642303|gb|EFF60460.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
Length = 436
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 175/385 (45%), Gaps = 45/385 (11%)
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQ---LIVPPGKWLTGSFNLTSHFTLYIH 117
+F D KT++ + +T + L K G + + +P G +L G+ L L
Sbjct: 6 EFINALDFKTNDIQQDDTVM--LQKAINQGAKEHSPVFIPKGIYLVGALFLKDKSHLIFE 63
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
+ A+L + ++E P + + G + ++ + I ++ G I+GQGE
Sbjct: 64 EGAVL---KGKTEIEAFPEIDTRVAGVEM---KWPAAILNVLSAKDILIEGKGIIDGQGE 117
Query: 178 PWWIKYRKKQ-------------------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWN 218
WW Y K + + RP + +++V I +L S WN
Sbjct: 118 HWWELYWGKDQKSGTRAEYDRKGLRWIADYAIKRPRACLLYHAEHVVIRDLIFQKSGFWN 177
Query: 219 VHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYG 278
+ YS++VL++ + IR D P+TDGI+ DS T+ RI + + GDDC+A+KSG D G
Sbjct: 178 LQITYSNDVLVEKIIIRHN-DGPSTDGIDIDSSTDVRIYECDLACGDDCIAIKSGRDGNG 236
Query: 279 IKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGR 338
+V + + I R C + +GSE+S G+ DV DI + G+R+K++ R
Sbjct: 237 ARVNRKSSRIEIAR--CNIRSGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSRKR 294
Query: 339 GAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDP--GFDPKALPTVTGINYRDMVADNVTQ 396
G ++ I V + M +++ F D+ + + D + +P VA+ + +
Sbjct: 295 GGVIENIRVENLNMMDVQFPFSWIMDWHNEYNRKNSNDLERMPESW-----QAVAEEIPE 349
Query: 397 SAKLDGIRNDPFTGICISNVTIKLT 421
S ++ +RN I + NV L+
Sbjct: 350 SKQMTKVRN-----IHVKNVQASLS 369
>gi|293571115|ref|ZP_06682155.1| glycoside hydrolase, family 28 [Enterococcus faecium E980]
gi|430842918|ref|ZP_19460825.1| glycosyl hydrolase [Enterococcus faecium E1007]
gi|431064175|ref|ZP_19493522.1| glycosyl hydrolase [Enterococcus faecium E1604]
gi|431130293|ref|ZP_19498935.1| glycosyl hydrolase [Enterococcus faecium E1613]
gi|431739352|ref|ZP_19528287.1| glycosyl hydrolase [Enterococcus faecium E1972]
gi|431742389|ref|ZP_19531282.1| glycosyl hydrolase [Enterococcus faecium E2039]
gi|291608845|gb|EFF38127.1| glycoside hydrolase, family 28 [Enterococcus faecium E980]
gi|430492629|gb|ELA68993.1| glycosyl hydrolase [Enterococcus faecium E1007]
gi|430566194|gb|ELB05313.1| glycosyl hydrolase [Enterococcus faecium E1613]
gi|430568816|gb|ELB07846.1| glycosyl hydrolase [Enterococcus faecium E1604]
gi|430596080|gb|ELB33937.1| glycosyl hydrolase [Enterococcus faecium E1972]
gi|430600147|gb|ELB37805.1| glycosyl hydrolase [Enterococcus faecium E2039]
Length = 443
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 175/385 (45%), Gaps = 45/385 (11%)
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQ---LIVPPGKWLTGSFNLTSHFTLYIH 117
+F D KT++ + +T + L K G + + +P G +L G+ L L
Sbjct: 13 EFINALDFKTNDIQQDDTVM--LQKAINQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFE 70
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
+ A+L + ++E P + + G + ++ + I ++ G I+GQGE
Sbjct: 71 EGAVL---KGKTEIEAFPEIDTRVAGIEM---KWPAAILNVLSAKDILIEGKGIIDGQGE 124
Query: 178 PWWIKYRKKQ-------------------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWN 218
WW Y K + + RP + +++V I +L S WN
Sbjct: 125 HWWELYWGKDQKSGTRAEYDRKGLRWIADYAIKRPRACLLYHAEHVVIRDLIFQKSGFWN 184
Query: 219 VHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYG 278
+ YS++VL++ + IR D P+TDGI+ DS T+ RI + + GDDC+A+KSG D G
Sbjct: 185 LQITYSNDVLVEKVIIRHN-DGPSTDGIDIDSSTDVRIYECDLACGDDCIAIKSGRDGNG 243
Query: 279 IKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGR 338
+V + + I R C + +GSE+S GI DV DI + G+R+K++ R
Sbjct: 244 ARVNRKSSRIEIAR--CNIRSGYGVTIGSEVSAGISDVYIHDIDFFQSDCGIRMKSSRER 301
Query: 339 GAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDP--GFDPKALPTVTGINYRDMVADNVTQ 396
G ++ I V + M +++ F D+ + + D + +P VA+ + +
Sbjct: 302 GGVIENIRVENLNMMDVQFPFSWIMDWHNEYNRKNSNDLERMPESW-----QAVAEEIPE 356
Query: 397 SAKLDGIRNDPFTGICISNVTIKLT 421
S ++ +RN I + NV L+
Sbjct: 357 SKQMTKVRN-----IHVKNVQASLS 376
>gi|336404054|ref|ZP_08584754.1| hypothetical protein HMPREF0127_02067 [Bacteroides sp. 1_1_30]
gi|335943751|gb|EGN05584.1| hypothetical protein HMPREF0127_02067 [Bacteroides sp. 1_1_30]
Length = 460
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 174/381 (45%), Gaps = 58/381 (15%)
Query: 58 VLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
++TD+G G+ +NTKA AI K GG +++VP G WLTG + S+ LY+
Sbjct: 53 LITDYGAKNGGEVNNTKAIAAAIEACHK---SGGGRVVVPAGIWLTGPIHFKSNVNLYLE 109
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
++A+L + + S++ LP + + G + +S L++ +V + G T+ + +
Sbjct: 110 ENAILNFTDNPSDY--LPAVMTSWEGLE--CYNYSPLLYAFECENVAII-GKGTLQPKMD 164
Query: 178 PWWIKYRKKQ---------------------------FNVTRPYLIEVMFSDNVQISNLT 210
W + +++ Q N RP+LI NV +
Sbjct: 165 TWKVWFKRPQPHLEALKELYTKASTDVPVIERQMAVGENHLRPHLIHFNRCKNVLLDGFK 224
Query: 211 LIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAV 270
+ +SP W +H L++ L ++A D N DGI+ + N +ED GDD V +
Sbjct: 225 IRESPFWTIHLYMCDGGLVRNLDVKAHGD--NNDGIDFEMSRNFLVEDCSFDQGDDAVVI 282
Query: 271 KSGWDEYGIKVGMPTQHLIIRRLIC-ISPDSAAIALGSEMSGGIKDVRAEDITAINTQSG 329
K+G ++ ++ P ++++IR C I + +GSE+SGGI+++ D TA N+
Sbjct: 283 KAGRNQDAWRLNTPCENIVIRN--CQILKGHTLLGIGSEISGGIRNIYMHDCTAPNSVMR 340
Query: 330 V-RIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRD 388
+ +KT RG +++ +Y++ + T + V + T ++D
Sbjct: 341 LFFVKTNHRRGGFIENVYMKNVQAGTAQRVL-----------------EIDTEVLYQWKD 383
Query: 389 MVADNVTQSAKLDGIRNDPFT 409
+V + ++DGI D T
Sbjct: 384 LVPTYEERITRIDGIYMDKVT 404
>gi|325298611|ref|YP_004258528.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324318164|gb|ADY36055.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 484
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 185/387 (47%), Gaps = 36/387 (9%)
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDA 120
DFG D +T+A A+ S+ GG + + G + TG+ + L + K A
Sbjct: 55 DFGLEQDTTKLSTEAIQRAVDACSRA---GGGIVAIKKGYYRTGALFIKGGVNLRLEKGA 111
Query: 121 LLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW 180
+L+AS+D ++P + G P G +I + + +TG TI+ +G+ W
Sbjct: 112 VLIASEDFGDYPERMTRIA-GIEMQWPAG----VINFEGVQNAALTG-EGTIDCRGKFCW 165
Query: 181 IKY---RKK----------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNV 227
KY RK ++ R I V S +V + TL+ + W VYS +
Sbjct: 166 DKYWTMRKDYVKRGLRWIVDYDAKRIRGIVVSQSKDVTLKGFTLLRTGFWGCQLVYSGHC 225
Query: 228 LIQGLTIRAPI--DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPT 285
+ G+ I + P+TDGI+ DS ++ IE+ YI DD + +K+G D G++V PT
Sbjct: 226 TVDGIRINNNLGGHGPSTDGIDVDSSSDILIENAYIDCNDDNICLKAGRDADGLRVNRPT 285
Query: 286 QHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEI 345
+ ++IR I + + +GSE SGGI++V A D+ + T + +R+K+A+ RG V+ I
Sbjct: 286 ERVVIRNCIA-AKGGGLVTIGSETSGGIRNVLAYDLESKGTSTMLRLKSAMNRGGTVEHI 344
Query: 346 YVRRMTMKTMKYVF-----WM-TGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAK 399
YV R + +K V W + Y P+ ++ K +P +++ M+A V +
Sbjct: 345 YVTRCKGEDVKNVLVADLNWNPSYSYSKLPEE-YEGKEIPE----HWKVMLAPVVPKEKG 399
Query: 400 LDGIRNDPFTGICISNVTIKLTEKPKE 426
R+ + I + N T+ + K ++
Sbjct: 400 YPHFRSVYMSHISVKNATVYIDAKGRD 426
>gi|424764550|ref|ZP_18191970.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|431050708|ref|ZP_19493377.1| glycosyl hydrolase [Enterococcus faecium E1590]
gi|431764023|ref|ZP_19552569.1| glycosyl hydrolase [Enterococcus faecium E3548]
gi|402419033|gb|EJV51317.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|430560246|gb|ELA99550.1| glycosyl hydrolase [Enterococcus faecium E1590]
gi|430621327|gb|ELB58094.1| glycosyl hydrolase [Enterococcus faecium E3548]
Length = 436
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 175/385 (45%), Gaps = 45/385 (11%)
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQ---LIVPPGKWLTGSFNLTSHFTLYIH 117
+F D KT++ + +T + L K G + + +P G +L G+ L L
Sbjct: 6 EFINALDFKTNDIQQDDTVM--LQKAINQGAKEHSPVFIPKGIYLVGALFLKDKSHLIFE 63
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
+ A+L + ++E P + + G + ++ + I ++ G I+GQGE
Sbjct: 64 EGAVL---KGKTEIEAFPEIDTRVAGVEM---KWPAAILNVLSAKDILIEGKGIIDGQGE 117
Query: 178 PWWIKYRKKQ-------------------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWN 218
WW Y K + + RP + +++V I +L S WN
Sbjct: 118 HWWELYWGKDQKSGTRAEYDRKGLRWIADYAIKRPRACLLYHAEHVVIRDLIFQKSGFWN 177
Query: 219 VHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYG 278
+ YS++VL++ + IR D P+TDGI+ DS T+ RI + + GDDC+A+KSG D G
Sbjct: 178 LQITYSNDVLVEKIIIRHN-DGPSTDGIDIDSSTDVRIYECDLACGDDCIAIKSGRDGNG 236
Query: 279 IKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGR 338
+V + + I R C + +GSE+S G+ DV DI + G+R+K++ R
Sbjct: 237 ARVNRKSSRIEIAR--CNIRSGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSRER 294
Query: 339 GAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDP--GFDPKALPTVTGINYRDMVADNVTQ 396
G ++ I V + M +++ F D+ + + D + +P VA+ + +
Sbjct: 295 GGVIENIRVENLNMMDVQFPFSWIMDWHNEYNRKNSNDLERMPESW-----QAVAEEIPE 349
Query: 397 SAKLDGIRNDPFTGICISNVTIKLT 421
S ++ +RN I + NV L+
Sbjct: 350 SKQMTKVRN-----IHVKNVQASLS 369
>gi|227550317|ref|ZP_03980366.1| pectin lyase [Enterococcus faecium TX1330]
gi|227180577|gb|EEI61549.1| pectin lyase [Enterococcus faecium TX1330]
Length = 436
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 177/385 (45%), Gaps = 45/385 (11%)
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQ---LIVPPGKWLTGSFNLTSHFTLYIH 117
+F D KT++ + +T + L K G + + +P G +L G+ L L
Sbjct: 6 EFINALDFKTNDIQQDDTVM--LQKAINQGAKEHSPVFIPKGIYLVGALFLKDKSHLIFE 63
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
+ A+L + ++E P + + G + ++ + I ++ G I+GQGE
Sbjct: 64 EGAVL---KGKTEIEAFPEIDTRVAGVEM---KWPAAILNVLSAKDILIEGKGIIDGQGE 117
Query: 178 PWW-------------IKYRKK------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSWN 218
WW +Y +K + + RP + +++V I +L S WN
Sbjct: 118 HWWELYWGEDQKSGTRAEYDRKGLRWIADYAIKRPRACLLYHAEHVVIRDLIFQKSGFWN 177
Query: 219 VHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYG 278
+ YS++VL++ + IR D P+TDGI+ DS T+ RI + + GDDC+A+KSG D G
Sbjct: 178 LQITYSNDVLVEKIIIRHN-DGPSTDGIDIDSSTDVRIYECDLACGDDCIAIKSGRDGNG 236
Query: 279 IKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGR 338
+V + + I R C + +GSE+S G+ DV DI + G+R+K++ R
Sbjct: 237 ARVNRKSSRIEIAR--CNIRSGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSRER 294
Query: 339 GAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDP--GFDPKALPTVTGINYRDMVADNVTQ 396
G ++ I V + M +++ F D+ + + D + +P VA+ + +
Sbjct: 295 GGVIENIRVENLNMMDVQFPFSWIMDWHNEYNRKNSNDLERMPESW-----QAVAEEIPE 349
Query: 397 SAKLDGIRNDPFTGICISNVTIKLT 421
S ++ +RN I + NV L+
Sbjct: 350 SKQMTKVRN-----IHVKNVQASLS 369
>gi|325103067|ref|YP_004272721.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324971915|gb|ADY50899.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 528
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 168/382 (43%), Gaps = 48/382 (12%)
Query: 73 TKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWP 132
T AI ++++ GG +I+P GKWLTG +L S L++ + A L S + +
Sbjct: 90 TAIIQKAIDDINQ---QGGGTVIIPRGKWLTGRISLKSFVNLHLEEGAELHFSGEIKNY- 145
Query: 133 LLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVT- 191
LP + + G + + I+ ++ VTG I G P RK+ NV
Sbjct: 146 -LPAVFTRNEGIELMS--LGACIYANGQENIAVTGKGKLI---GPPLDSPLRKRFMNVGV 199
Query: 192 -------------------------RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSN 226
P I + N+ I ++L +P WNV P+Y N
Sbjct: 200 IEDVVPLDKPVSERVYEGHNDEFIFLPMFISPINCKNILIEGISLERTPFWNVVPIYCEN 259
Query: 227 VLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQ 286
V+I+G+T+ + + P DGI+ +S N IE + GDDC +K+G E G++V PT+
Sbjct: 260 VIIRGITVNS-VGIPRGDGIDIESSKNVLIEYCTLSCGDDCFTMKAGRGEDGLRVNKPTE 318
Query: 287 HLIIRRLICISPDS-AAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEI 345
++++R C++ + I +GSE + I ++ D +T G+R KT RG
Sbjct: 319 NVVVR--FCLAKEGHGGITVGSETAAKINNLYVHDTVFDDTGVGIRFKTRRPRGGGGANY 376
Query: 346 YVRRMTMKTMKYVF-W-MTGD---YGSHPD--PGFDPKAL-PTVTGINYRDMVADNVTQS 397
Y R+ M F W M G G + P +L P+ + +D++ +N
Sbjct: 377 YYERIRMNLRDEAFRWDMLGSPMHVGKLAERLPALPINSLTPSFKNTSAKDIIVENAKAF 436
Query: 398 AKLDGIRNDPFTGICISNVTIK 419
+++GI P + N IK
Sbjct: 437 VRIEGIPETPMQNFRLENAVIK 458
>gi|431758794|ref|ZP_19547417.1| glycosyl hydrolase [Enterococcus faecium E3083]
gi|430616609|gb|ELB53505.1| glycosyl hydrolase [Enterococcus faecium E3083]
Length = 436
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 175/385 (45%), Gaps = 45/385 (11%)
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQ---LIVPPGKWLTGSFNLTSHFTLYIH 117
+F D KT++ + +T + L K G + + +P G +L G+ L L
Sbjct: 6 EFINALDFKTNDIQQDDTVM--LQKAINQGAKEHSPVFIPKGIYLVGALFLKDKSHLIFE 63
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
+ A+L + ++E P + + G + ++ + I ++ G I+GQGE
Sbjct: 64 EGAVL---KGKTEIEAFPEIDTRVAGVEM---KWPAAILNVLSAKDILIEGKGIIDGQGE 117
Query: 178 PWWIKYRKKQ-------------------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWN 218
WW Y K + + RP + +++V I +L S WN
Sbjct: 118 HWWELYWGKDQKSGTRAEYDRKVLRWIADYAIKRPRACLLYHAEHVVIRDLIFQKSGFWN 177
Query: 219 VHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYG 278
+ YS++VL++ + IR D P+TDGI+ DS T+ RI + + GDDC+A+KSG D G
Sbjct: 178 LQITYSNDVLVEKIIIRHN-DGPSTDGIDIDSSTDVRIYECDLACGDDCIAIKSGRDGNG 236
Query: 279 IKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGR 338
+V + + I R C + +GSE+S G+ DV DI + G+R+K++ R
Sbjct: 237 ARVNRKSSRIEIAR--CNIRSGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSRER 294
Query: 339 GAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDP--GFDPKALPTVTGINYRDMVADNVTQ 396
G ++ I V + M +++ F D+ + + D + +P VA+ + +
Sbjct: 295 GGVIENIRVENLNMMDVQFPFSWIMDWHNEYNRKNSNDLERMPESW-----QAVAEEIPE 349
Query: 397 SAKLDGIRNDPFTGICISNVTIKLT 421
S ++ +RN I + NV L+
Sbjct: 350 SKQMTKVRN-----IHVKNVQASLS 369
>gi|388258052|ref|ZP_10135230.1| glycoside hydrolase family 28 [Cellvibrio sp. BR]
gi|387938173|gb|EIK44726.1| glycoside hydrolase family 28 [Cellvibrio sp. BR]
Length = 513
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 176/368 (47%), Gaps = 52/368 (14%)
Query: 14 PHVIKILSTLLTLGLLSPQVAECRPT---KNSYTIEF-QALNCRKHSAVLTDFGGVGDGK 69
P I +L++L+TL P A PT + T+ + +N + +A +DFG GDG
Sbjct: 37 PAYIVLLASLITL----PAQAGPNPTVLERTELTVAAPKNINALEINA--SDFGAKGDGT 90
Query: 70 TSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDES 129
T +T A AI A A L++ PG +LTGS L S+ L + K L Q+
Sbjct: 91 TDDTNALQKAID----ATAAKKATLVLQPGTYLTGSLFLKSNMALRLDKGVTLTGKQN-- 144
Query: 130 EWPLLPPLPSYGRGRDEPGGRF----SSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRK 185
+ SY R + G S+L+ DV + G TI+G G +W +
Sbjct: 145 -------IESYPRQKTRIAGIEIVWPSALLNVYEQADVHIYG-EGTIDGNGMVFWQTFWD 196
Query: 186 KQ-------------FNVTRPYLIEVMFSDNVQISN-LTLIDSPSWNVHPVYSSNVLIQG 231
K+ ++ RP LI+V S +++ L + + W + VYS++V +
Sbjct: 197 KRNVYEGKGLRWAADYDAERPRLIQVYNSKRIELGGGLHMKRAGFWTLQIVYSNDVKVSN 256
Query: 232 LTIRAPIDS--PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
+ IR D P+TDGI+ DS + +E I DD + +K+G D G++V PT+H++
Sbjct: 257 VVIRNNSDGKGPSTDGIDIDSSHHVLVEKADIDVNDDALCLKAGRDADGLRVNRPTEHVV 316
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQ----SGVRIKTAVGRGAYVKEI 345
IR I I A + GSE SG I+++ D+ ++ Q SG+ K+A RG V +I
Sbjct: 317 IRDSI-IRHAEAGVTFGSETSGSIRNI---DVYNLDVQGPVYSGIFFKSAHVRGGTVSDI 372
Query: 346 YVRRMTMK 353
+R M ++
Sbjct: 373 RIRDMKVQ 380
>gi|69249564|ref|ZP_00605017.1| Glycoside hydrolase, family 28 [Enterococcus faecium DO]
gi|389869657|ref|YP_006377080.1| glycosyl hydrolase [Enterococcus faecium DO]
gi|68194111|gb|EAN08650.1| Glycoside hydrolase, family 28 [Enterococcus faecium DO]
gi|388534906|gb|AFK60098.1| glycosyl hydrolase [Enterococcus faecium DO]
Length = 317
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 150/314 (47%), Gaps = 35/314 (11%)
Query: 69 KTSNTKAFNTAISNLSKYAADGGAQ----LIVPPGKWLTGSFNLTSHFTLYIHKDALLLA 124
KT++T+ +T I L K A D GA+ + +P G +L G+ L L + A+L
Sbjct: 14 KTNDTQQDDTII--LQK-AIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKG 70
Query: 125 SQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYR 184
D +P + + G P + L + D+++ G I+GQG+ WW Y
Sbjct: 71 RTDIEAFPEIDTRVA-GVEMKWPAAILNVL----SAKDILIEG-KGIIDGQGDHWWELYW 124
Query: 185 KKQ-------------------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSS 225
K + + RP + +++V + +L S WN+ YS+
Sbjct: 125 GKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSN 184
Query: 226 NVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPT 285
+VL++ + IR D P+TDGI+ DS TN R+ + + GDDC+A+KSG D G +V +
Sbjct: 185 DVLVEKVIIRNN-DGPSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKS 243
Query: 286 QHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEI 345
+ + R C + +GSE+S G+ DV DI + G+R+K++ RG ++ I
Sbjct: 244 SRIEVAR--CKIRSGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENI 301
Query: 346 YVRRMTMKTMKYVF 359
V + M + ++F
Sbjct: 302 RVENLNMIDVHFLF 315
>gi|160886934|ref|ZP_02067937.1| hypothetical protein BACOVA_04948 [Bacteroides ovatus ATCC 8483]
gi|423294892|ref|ZP_17273019.1| parallel beta-helix [Bacteroides ovatus CL03T12C18]
gi|156107345|gb|EDO09090.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|392676083|gb|EIY69524.1| parallel beta-helix [Bacteroides ovatus CL03T12C18]
Length = 511
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 157/318 (49%), Gaps = 35/318 (11%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
FG V D +T+A AI + A GG +++ PG + TG+ + S L + K
Sbjct: 68 FGAVADSTVLSTEAIQKAIDSC---AVIGGGTVVLQPGYYQTGALFIKSGVNLQLDKGVT 124
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRF----SSLIFGTNLTDVVVTGGNATINGQGE 177
LLAS P + Y R G +++I N + V+G T++ +G+
Sbjct: 125 LLAS---------PSIHHYPEFRSRIAGIEMTWPAAVINIVNEKNASVSG-EGTLDCRGK 174
Query: 178 PWWIKY---RKK----------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYS 224
+W KY RK+ ++ R I + S ++ + TL+ + W +YS
Sbjct: 175 VFWDKYWEMRKEYEAKGLRWIVDYDCKRVRGILIERSSDITLKGFTLMRTGFWGCQILYS 234
Query: 225 SNVLIQGLTIRAPI--DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVG 282
I GLTI I P+TDGI+ DS N +E+ + DD + +KSG D G++V
Sbjct: 235 DYCTIDGLTINNNIGGHGPSTDGIDIDSSCNILVENCDVDCNDDNICIKSGRDADGLRVN 294
Query: 283 MPTQHLIIRRLICISPDSAA-IALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAY 341
+PT++++IR CI+ A I GSE SG I++V ++ AI T + +R+K+A+ RG
Sbjct: 295 LPTENVVIRN--CIARKGAGLITCGSETSGSIRNVLGYNLEAIGTSAVLRLKSAMNRGGT 352
Query: 342 VKEIYVRRMTMKTMKYVF 359
++ IY+ + + +++V
Sbjct: 353 IENIYMTEVKAENVRHVL 370
>gi|423301865|ref|ZP_17279888.1| hypothetical protein HMPREF1057_03029 [Bacteroides finegoldii
CL09T03C10]
gi|408470956|gb|EKJ89488.1| hypothetical protein HMPREF1057_03029 [Bacteroides finegoldii
CL09T03C10]
Length = 505
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 150/317 (47%), Gaps = 33/317 (10%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
G V D +T A AI + A GG + + PG + TG+ + S L++ K
Sbjct: 63 LGAVADSTVLSTTAIQKAIDSC---AVSGGGTVTLQPGYYQTGALFIKSGVNLHLDKGVT 119
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGG---RFSSLIFGTNLTDVVVTGGNATINGQGEP 178
LLAS P + Y R G + S + G T++ +G+
Sbjct: 120 LLAS---------PQIHHYPEFRSRVAGIEMTWPSAVINIIDEKNASISGEGTLDCRGKV 170
Query: 179 WWIKY---RKK----------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSS 225
+W KY RK+ ++ R I V S ++ +S TL+ + W +YS
Sbjct: 171 FWDKYWEMRKEYEAKGLRWIVDYDCKRVRGILVERSSDITLSGFTLMRTGFWGCQILYSD 230
Query: 226 NVLIQGLTIRAPI--DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGM 283
+ I GLTI I P+TDGI+ DS T+ +E+ I DD + +KSG D G++V
Sbjct: 231 HCTINGLTINNNIGGHGPSTDGIDIDSSTHVLVENCDIDCNDDNICIKSGRDADGLRVNR 290
Query: 284 PTQHLIIRRLICISPDSAA-IALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYV 342
PT+ ++IR CI+ A I GSE SG I+++ ++ A T + +R+K+A+ RG V
Sbjct: 291 PTEKIVIRN--CIARKGAGLITCGSETSGSIRNILGYNLDAEGTSTVLRLKSAMNRGGTV 348
Query: 343 KEIYVRRMTMKTMKYVF 359
+ IY+ R+ K ++ V
Sbjct: 349 ENIYMTRINAKNVQQVL 365
>gi|315497213|ref|YP_004086017.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315415225|gb|ADU11866.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 466
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 165/337 (48%), Gaps = 51/337 (15%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+TDFG D + + T A AI + G +IVP G W TG NL SH L++ K
Sbjct: 57 ITDFGASTDDQAATTAAIAKAIDAAHRA---GSGNVIVPQGIWPTGKINLKSHVNLHLSK 113
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A LL S+ ++ LPP+ + G + +S L++ + +V ++G + + +
Sbjct: 114 GATLLFSEKPEDY--LPPVQTSWEGIE--CFNYSPLVYAFDCENVGLSG-EGKLKAKLDV 168
Query: 179 WWIKYRK-----------------------KQF----NVTRPYLIEVMFSDNVQISNLTL 211
W + Y++ +Q N RP+ ++ +V I ++++
Sbjct: 169 WQVWYKRPKPHMDALVRLYDLAYKGVPVEARQMVEGENHLRPHFVQFNRCRHVLIEDISI 228
Query: 212 IDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVK 271
DSP W +HP+ +V+I+ + +RA N DG++P+ N IED GDD V+VK
Sbjct: 229 EDSPFWTIHPLLCRDVVIRRVKVRA--HGHNNDGVDPEMSQNVLIEDCVFDQGDDAVSVK 286
Query: 272 SGWDEYGIKVGMPTQHLIIRRLIC-ISPDSAAIALGSEMSGGIKDV-----------RAE 319
SG D ++ PT+++++R C I +A+GSE+SGGI+++ + +
Sbjct: 287 SGRDMDAWRLNTPTKNVVMRN--CRIKNGHQLMAVGSELSGGIENIFVDNCHFVGDGKGD 344
Query: 320 DITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK 356
D A+ + + +KT RG YVK I++R ++ ++
Sbjct: 345 DGWAVPINNLLYVKTNERRGGYVKNIHMRNVSATKIQ 381
>gi|261207238|ref|ZP_05921927.1| glycoside hydrolase, family 28 [Enterococcus faecium TC 6]
gi|289567178|ref|ZP_06447568.1| glycoside hydrolase, family 28 [Enterococcus faecium D344SRF]
gi|294614358|ref|ZP_06694275.1| glycoside hydrolase, family 28 [Enterococcus faecium E1636]
gi|430850287|ref|ZP_19468050.1| glycosyl hydrolase [Enterococcus faecium E1185]
gi|260078866|gb|EEW66568.1| glycoside hydrolase, family 28 [Enterococcus faecium TC 6]
gi|289161037|gb|EFD08947.1| glycoside hydrolase, family 28 [Enterococcus faecium D344SRF]
gi|291592830|gb|EFF24422.1| glycoside hydrolase, family 28 [Enterococcus faecium E1636]
gi|430535912|gb|ELA76303.1| glycosyl hydrolase [Enterococcus faecium E1185]
Length = 436
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 152/320 (47%), Gaps = 35/320 (10%)
Query: 69 KTSNTKAFNTAISNLSKYAADGGAQ----LIVPPGKWLTGSFNLTSHFTLYIHKDALLLA 124
KT++T+ +T I L K A D GA+ + +P G +L G+ L L + A+L
Sbjct: 14 KTNDTQQDDTII--LQK-AIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKG 70
Query: 125 SQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYR 184
D +P + + G P + L + D+++ G I+GQG+ WW Y
Sbjct: 71 RTDIEAFPEIDTRVA-GVEMKWPAAILNVL----SAKDILIEG-KGIIDGQGDHWWELYW 124
Query: 185 KKQ-------------------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSS 225
K + + RP + +++V + +L S WN+ YS+
Sbjct: 125 GKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSN 184
Query: 226 NVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPT 285
+VL++ + IR D P+TDGI+ DS TN RI + + GDDC+A+KSG D G +V +
Sbjct: 185 DVLVEKVIIRNN-DGPSTDGIDIDSSTNVRIYECDLACGDDCIAIKSGRDGNGARVNRKS 243
Query: 286 QHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEI 345
+ + R C + +GSE+S G+ DV DI + G+R+K++ RG ++ I
Sbjct: 244 SRIEVAR--CKIRSGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENI 301
Query: 346 YVRRMTMKTMKYVFWMTGDY 365
V + M +++ F D+
Sbjct: 302 RVENLNMIDVQFPFSWIMDW 321
>gi|430824494|ref|ZP_19443051.1| glycosyl hydrolase [Enterococcus faecium E0120]
gi|430868568|ref|ZP_19482862.1| glycosyl hydrolase [Enterococcus faecium E1574]
gi|431744399|ref|ZP_19533267.1| glycosyl hydrolase [Enterococcus faecium E2071]
gi|430441022|gb|ELA51165.1| glycosyl hydrolase [Enterococcus faecium E0120]
gi|430548832|gb|ELA88680.1| glycosyl hydrolase [Enterococcus faecium E1574]
gi|430605142|gb|ELB42547.1| glycosyl hydrolase [Enterococcus faecium E2071]
Length = 436
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 152/320 (47%), Gaps = 35/320 (10%)
Query: 69 KTSNTKAFNTAISNLSKYAADGGAQ----LIVPPGKWLTGSFNLTSHFTLYIHKDALLLA 124
KT++T+ +T I L K A D GA+ + +P G +L G+ L L + A+L
Sbjct: 14 KTNDTQQDDTII--LQK-AIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKG 70
Query: 125 SQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYR 184
D +P + + G P + L + D+++ G I+GQG+ WW Y
Sbjct: 71 RTDIEAFPEIDTRVA-GAEMKWPAAILNVL----SAKDILIEG-KGIIDGQGDHWWELYW 124
Query: 185 KKQ-------------------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSS 225
K + + RP + +++V + +L S WN+ YS+
Sbjct: 125 GKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSN 184
Query: 226 NVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPT 285
+VL++ + IR D P+TDGI+ DS TN R+ + + GDDC+A+KSG D G +V +
Sbjct: 185 DVLVEKVIIRNN-DGPSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKS 243
Query: 286 QHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEI 345
+ + R C + +GSE+S G+ DV DI + G+R+K++ RG ++ I
Sbjct: 244 SRIEVAR--CKIRSGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENI 301
Query: 346 YVRRMTMKTMKYVFWMTGDY 365
V + M +++ F D+
Sbjct: 302 RVENLNMIDVQFPFSWIMDW 321
>gi|150004702|ref|YP_001299446.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149933126|gb|ABR39824.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 471
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 182/393 (46%), Gaps = 45/393 (11%)
Query: 58 VLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
++T +G GK NTKA AI+ GG ++++P G+WLTG +L S+ LY+
Sbjct: 53 LITKYGAKAGGKKLNTKAIAKAITACHLV---GGGRVVIPKGEWLTGPIHLKSNINLYME 109
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
+ A+L + S++ LP + + G + +S LI+ ++ ++ +T G + + +
Sbjct: 110 EGAVLRFTDTPSDY--LPAVMTSWEGME--CYNYSPLIYASDCENIAIT-GKGVLAPKMD 164
Query: 178 PWWIKYRKKQFNVT---------------------------RPYLIEVMFSDNVQISNLT 210
W I + + Q ++ RP+LI + NV +
Sbjct: 165 TWRIWFARPQAHMEALRKLYTMASTDVPVEERQMAVGENNLRPHLIHLNRCRNVLLDGFK 224
Query: 211 LIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAV 270
+ +SP W +H +++GL ++A + N DGI+ + N IE+ GDD V +
Sbjct: 225 IRESPFWTIHLYMCKGGIVRGLDVKA--NGHNNDGIDLEMSRNFLIENCKFDQGDDAVVI 282
Query: 271 KSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAE--DITAINTQS 328
KSG + ++G P +++++R + + +GSE+SGG+++V D+ A +
Sbjct: 283 KSGRNRDAWRLGTPCENIVVRNCQ-VMEGHTLLGIGSELSGGVRNVYMHHCDVPA-SVHC 340
Query: 329 GVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDY---GSHPDPGFDPKALPTVTGIN 385
IKT RG V+ IY+ +T K +Y+ + D P ++ + L + GI+
Sbjct: 341 LFFIKTNRRRGGIVENIYLEDVTCKDTEYLVGLDMDILYQWRELVPTYEER-LTRIEGIH 399
Query: 386 YRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
+D+ + +L G P I I N+ +
Sbjct: 400 VKDIRCGSADFVYELCGDERLPPKDITIRNIVV 432
>gi|160892048|ref|ZP_02073051.1| hypothetical protein BACUNI_04508 [Bacteroides uniformis ATCC 8492]
gi|156858526|gb|EDO51957.1| polygalacturonase (pectinase) [Bacteroides uniformis ATCC 8492]
Length = 471
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 182/393 (46%), Gaps = 45/393 (11%)
Query: 58 VLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
++T +G GK NTKA AI+ GG ++++P G+WLTG +L S+ LY+
Sbjct: 53 LITKYGAKAGGKKLNTKAIAKAITACHLV---GGGRVVIPKGEWLTGPIHLKSNINLYME 109
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
+ A+L + S++ LP + + G + +S LI+ ++ ++ +T G + + +
Sbjct: 110 EGAVLRFTDTPSDY--LPAVMTSWEGME--CYNYSPLIYASDCENIAIT-GKGVLAPKMD 164
Query: 178 PWWIKYRKKQFNVT---------------------------RPYLIEVMFSDNVQISNLT 210
W I + + Q ++ RP+LI + NV +
Sbjct: 165 TWRIWFARPQAHMEALRKLYTMASTDVPVEERQMAVGENNLRPHLIHLNRCRNVLLDGFK 224
Query: 211 LIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAV 270
+ +SP W +H +++GL ++A + N DGI+ + N IE+ GDD V +
Sbjct: 225 IRESPFWTIHLYMCKGGIVRGLDVKA--NGHNNDGIDLEMSRNFLIENCKFDQGDDAVVI 282
Query: 271 KSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAE--DITAINTQS 328
KSG + ++G P +++++R + + +GSE+SGG+++V D+ A +
Sbjct: 283 KSGRNRDAWRLGTPCENIVVRNCQ-VMEGHTLLGIGSELSGGVRNVYMHHCDVPA-SVHC 340
Query: 329 GVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDY---GSHPDPGFDPKALPTVTGIN 385
IKT RG V+ IY+ +T K +Y+ + D P ++ + L + GI+
Sbjct: 341 LFFIKTNRRRGGIVENIYLEDVTCKDTEYLVGLDMDILYQWRELVPTYEER-LTRIEGIH 399
Query: 386 YRDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
+D+ + +L G P I I N+ +
Sbjct: 400 VKDIRCGSADFVYELCGDERLPPKDITIRNIVV 432
>gi|298383818|ref|ZP_06993379.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
gi|298263422|gb|EFI06285.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
Length = 516
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 169/378 (44%), Gaps = 41/378 (10%)
Query: 73 TKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWP 132
TKA AI +S+ DGG ++++P G W TG L S+ L++ + A L S + +++
Sbjct: 78 TKAIQKAIDKVSR---DGGGKVVIPAGIWKTGRIELKSNVNLHLEEGAELHFSGNINDY- 133
Query: 133 LLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI--NGQGEPWW---------- 180
LP + + G + +L++ N ++ +TG + E W
Sbjct: 134 -LPVVLTRFEGVEVYS--LGALVYANNQENIALTGHGKLVAPTTDCEIWKRQCYESIEKY 190
Query: 181 ------IKYR----KKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQ 230
+K R KK +V P + NV I +TL S WN+ PVY V+I+
Sbjct: 191 VEQYPDVKERIADGKKGRSVFLPLFVSPTNCKNVLIEGVTLERSLFWNIVPVYCDGVIIR 250
Query: 231 GLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLII 290
G T+ + TDGI+ +S N IE + GDDC +KSG E GI+V P+++++I
Sbjct: 251 GATVDSH-GHGRTDGIDIESTRNVLIEYCSLDCGDDCFTMKSGRGEDGIRVNKPSENIVI 309
Query: 291 RRLICISPDS-AAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRR 349
R C++ I GSE + I+++ D T+SG+R KT RG + + R
Sbjct: 310 R--YCLAKRGWGGIVCGSETAAMIRNLYVHDCVFTGTKSGLRFKTRRSRGGGGENLTFER 367
Query: 350 MTMKTMKYVFW--MTGDYGSHPDPGFDPKA------LPTVTGINYRDMVADNVTQSAKLD 401
+ M FW M G+ D A P+ I RD++ ++ + L+
Sbjct: 368 IRMNLTGAAFWWDMLGEEKHVGDLAKRLPARPITPLTPSFKNITIRDIIVESASYFIDLN 427
Query: 402 GIRNDPFTGICISNVTIK 419
GI P I N+ K
Sbjct: 428 GIPETPAENNLIENLVGK 445
>gi|257883313|ref|ZP_05662966.1| glycoside hydrolase [Enterococcus faecium 1,231,502]
gi|294622163|ref|ZP_06701235.1| glycoside hydrolase, family 28 [Enterococcus faecium U0317]
gi|424791207|ref|ZP_18217685.1| polygalacturonase [Enterococcus faecium V689]
gi|424796702|ref|ZP_18222393.1| polygalacturonase [Enterococcus faecium S447]
gi|424949498|ref|ZP_18365166.1| polygalacturonase [Enterococcus faecium R496]
gi|424953671|ref|ZP_18368620.1| polygalacturonase [Enterococcus faecium R494]
gi|424956677|ref|ZP_18371442.1| polygalacturonase [Enterococcus faecium R446]
gi|424968089|ref|ZP_18381747.1| polygalacturonase [Enterococcus faecium P1140]
gi|424994453|ref|ZP_18406390.1| polygalacturonase [Enterococcus faecium ERV168]
gi|424998615|ref|ZP_18410289.1| polygalacturonase [Enterococcus faecium ERV165]
gi|425001111|ref|ZP_18412641.1| polygalacturonase [Enterococcus faecium ERV161]
gi|425005192|ref|ZP_18416457.1| polygalacturonase [Enterococcus faecium ERV102]
gi|425011657|ref|ZP_18422540.1| polygalacturonase [Enterococcus faecium E422]
gi|425017825|ref|ZP_18428310.1| polygalacturonase [Enterococcus faecium C621]
gi|425032265|ref|ZP_18437333.1| polygalacturonase [Enterococcus faecium 515]
gi|425039363|ref|ZP_18443906.1| polygalacturonase [Enterococcus faecium 513]
gi|427397514|ref|ZP_18889996.1| hypothetical protein HMPREF9307_02172 [Enterococcus durans
FB129-CNAB-4]
gi|430860949|ref|ZP_19478544.1| glycosyl hydrolase [Enterococcus faecium E1573]
gi|430968697|ref|ZP_19487858.1| glycosyl hydrolase [Enterococcus faecium E1576]
gi|431017550|ref|ZP_19490427.1| glycosyl hydrolase [Enterococcus faecium E1578]
gi|431261224|ref|ZP_19505721.1| glycosyl hydrolase [Enterococcus faecium E1623]
gi|431777891|ref|ZP_19566132.1| glycosyl hydrolase [Enterococcus faecium E2560]
gi|431783620|ref|ZP_19571718.1| glycosyl hydrolase [Enterococcus faecium E6012]
gi|431786792|ref|ZP_19574790.1| glycosyl hydrolase [Enterococcus faecium E6045]
gi|447913735|ref|YP_007395147.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
gi|257818971|gb|EEV46299.1| glycoside hydrolase [Enterococcus faecium 1,231,502]
gi|291598332|gb|EFF29421.1| glycoside hydrolase, family 28 [Enterococcus faecium U0317]
gi|402919873|gb|EJX40434.1| polygalacturonase [Enterococcus faecium V689]
gi|402922629|gb|EJX42990.1| polygalacturonase [Enterococcus faecium S447]
gi|402934203|gb|EJX53573.1| polygalacturonase [Enterococcus faecium R496]
gi|402938575|gb|EJX57571.1| polygalacturonase [Enterococcus faecium R494]
gi|402945373|gb|EJX63728.1| polygalacturonase [Enterococcus faecium R446]
gi|402952951|gb|EJX70715.1| polygalacturonase [Enterococcus faecium P1140]
gi|402980028|gb|EJX95661.1| polygalacturonase [Enterococcus faecium ERV168]
gi|402982462|gb|EJX97925.1| polygalacturonase [Enterococcus faecium ERV165]
gi|402987164|gb|EJY02253.1| polygalacturonase [Enterococcus faecium ERV102]
gi|402987438|gb|EJY02501.1| polygalacturonase [Enterococcus faecium ERV161]
gi|402995993|gb|EJY10403.1| polygalacturonase [Enterococcus faecium E422]
gi|403003651|gb|EJY17535.1| polygalacturonase [Enterococcus faecium C621]
gi|403013574|gb|EJY26660.1| polygalacturonase [Enterococcus faecium 515]
gi|403016109|gb|EJY28944.1| polygalacturonase [Enterococcus faecium 513]
gi|425722190|gb|EKU85087.1| hypothetical protein HMPREF9307_02172 [Enterococcus durans
FB129-CNAB-4]
gi|430551267|gb|ELA91036.1| glycosyl hydrolase [Enterococcus faecium E1573]
gi|430554867|gb|ELA94435.1| glycosyl hydrolase [Enterococcus faecium E1576]
gi|430559249|gb|ELA98609.1| glycosyl hydrolase [Enterococcus faecium E1578]
gi|430576629|gb|ELB15266.1| glycosyl hydrolase [Enterococcus faecium E1623]
gi|430638495|gb|ELB74426.1| glycosyl hydrolase [Enterococcus faecium E2560]
gi|430644804|gb|ELB80385.1| glycosyl hydrolase [Enterococcus faecium E6012]
gi|430644943|gb|ELB80507.1| glycosyl hydrolase [Enterococcus faecium E6045]
gi|445189444|gb|AGE31086.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
Length = 436
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 152/320 (47%), Gaps = 35/320 (10%)
Query: 69 KTSNTKAFNTAISNLSKYAADGGAQ----LIVPPGKWLTGSFNLTSHFTLYIHKDALLLA 124
KT++T+ +T I L K A D GA+ + +P G +L G+ L L + A+L
Sbjct: 14 KTNDTQQDDTII--LQK-AIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKG 70
Query: 125 SQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYR 184
D +P + + G P + L + D+++ G I+GQG+ WW Y
Sbjct: 71 RTDIEAFPEIDTRVA-GVEMKWPAAILNVL----SAKDILIEG-KGIIDGQGDHWWELYW 124
Query: 185 KKQ-------------------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSS 225
K + + RP + +++V + +L S WN+ YS+
Sbjct: 125 GKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSN 184
Query: 226 NVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPT 285
+VL++ + IR D P+TDGI+ DS TN R+ + + GDDC+A+KSG D G +V +
Sbjct: 185 DVLVEKVIIRNN-DGPSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKS 243
Query: 286 QHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEI 345
+ + R C + +GSE+S G+ DV DI + G+R+K++ RG ++ I
Sbjct: 244 SRIEVAR--CKIRSGYGVTIGSEVSAGVSDVYIHDINFFQSDCGIRMKSSKERGGVIENI 301
Query: 346 YVRRMTMKTMKYVFWMTGDY 365
V + M +++ F D+
Sbjct: 302 RVENLNMIDVQFPFSWIMDW 321
>gi|420263796|ref|ZP_14766432.1| exo-poly-alpha-D-galacturonosidase [Enterococcus sp. C1]
gi|394769238|gb|EJF49101.1| exo-poly-alpha-D-galacturonosidase [Enterococcus sp. C1]
Length = 417
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 151/299 (50%), Gaps = 30/299 (10%)
Query: 94 LIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSS 153
+I PPG + G+ L S+ L + +D +L SQ+ +++P + + G P ++
Sbjct: 22 VITPPGAYQIGALFLKSNVHLIVSEDTILYGSQELADYPEVDNRVA-GINMKWP----AA 76
Query: 154 LIFGTNLTDVVVTGGNATINGQGEPWW-------------IKYRKK------QFNVTRPY 194
+I + +V+++G ++G+GE WW Y KK ++ RP
Sbjct: 77 MINVFHAENVMISG-KGKLDGRGETWWQTFWGTDEASGMMADYAKKGLRWAADYDCKRPR 135
Query: 195 LIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNT 254
I V S V I +++ + S WN YS ++LI G+TI P+TDGI+ DSC
Sbjct: 136 NILVYESQQVTIKDISSVQSGFWNTQITYSHHILIDGITIDNG-KGPSTDGIDIDSCEEV 194
Query: 255 RIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIK 314
I++ YI DD +++K+G + + + I+ C + IA+GSE SGGI+
Sbjct: 195 TIQNAYISCNDDNISIKAGRGAEALAQQRSCRKITIKD--CQLGYGSGIAIGSETSGGIE 252
Query: 315 DVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGF 373
+++ + + T +G RIK+A RG +++++ +TMK + + F + ++ +PD +
Sbjct: 253 EIKIQKVVFEQTGAGFRIKSANNRGGFIRKVTASDLTMKDVGFPFLLQTNW--YPDYSY 309
>gi|325568852|ref|ZP_08145145.1| exo-poly-alpha-D-galacturonosidase [Enterococcus casseliflavus ATCC
12755]
gi|325157890|gb|EGC70046.1| exo-poly-alpha-D-galacturonosidase [Enterococcus casseliflavus ATCC
12755]
Length = 417
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 151/299 (50%), Gaps = 30/299 (10%)
Query: 94 LIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSS 153
+I PPG + G+ L S+ L + +D +L SQ+ +++P + + G P ++
Sbjct: 22 VITPPGAYQIGALFLKSNVHLIVSEDTILYGSQELADYPEVDNRVA-GINMKWP----AA 76
Query: 154 LIFGTNLTDVVVTGGNATINGQGEPWW-------------IKYRKK------QFNVTRPY 194
+I + +V+++G ++G+GE WW Y KK ++ RP
Sbjct: 77 MINVFHAENVMISG-KGKLDGRGETWWQTFWGTDEASGMMADYTKKGLRWAADYDCKRPR 135
Query: 195 LIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNT 254
I V S V I +++ + S WN YS ++LI G+TI P+TDGI+ DSC
Sbjct: 136 NILVYESQQVTIKDISSVQSGFWNTQITYSHHILIDGITIDNG-KGPSTDGIDIDSCEEV 194
Query: 255 RIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIK 314
I++ YI DD +++K+G + + + I+ C + IA+GSE SGGI+
Sbjct: 195 TIQNAYISCNDDNISIKAGRGAEALAQQRSCRKITIKD--CQLGYGSGIAIGSETSGGIE 252
Query: 315 DVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGF 373
+++ + + T +G RIK+A RG +++++ +TMK + + F + ++ +PD +
Sbjct: 253 EIKIQKVVFEQTGAGFRIKSANNRGGFIRKVTASDLTMKDVGFPFLLQTNW--YPDYSY 309
>gi|383114418|ref|ZP_09935182.1| hypothetical protein BSGG_1410 [Bacteroides sp. D2]
gi|313693875|gb|EFS30710.1| hypothetical protein BSGG_1410 [Bacteroides sp. D2]
Length = 487
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 159/314 (50%), Gaps = 27/314 (8%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
FG D +T A AI + GG ++V PG + G+ + S L++ K
Sbjct: 58 FGLRNDTSVFSTHAIQAAIDACHQ---QGGGTVVVAPGYYKIGALFVKSGVNLHLSKGTT 114
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWI 181
LLAS++ ++P P + G P S++I + + +TG I+ +G+ +W
Sbjct: 115 LLASENIQDYPEFPSRIA-GIEMTWP----SAVINIMDAENAALTG-EGFIDCRGKVFWD 168
Query: 182 KY-------RKKQ------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
KY KK ++ R + V S ++ + + TL+ + W +YS +
Sbjct: 169 KYWAMREDYEKKNLRWIVDYDCKRVRGVLVSNSKHITLKDFTLVRTGFWACQILYSDHCS 228
Query: 229 IQGLTIRAPI--DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQ 286
+ GLTI + P+TDGI+ DS TN IE+ + DD + +K+G D G++V PT+
Sbjct: 229 VSGLTINNNVGGHGPSTDGIDIDSSTNILIENCDVDCNDDNICIKAGRDADGLRVNRPTE 288
Query: 287 HLIIRRLICISPDSAA-IALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEI 345
++++R CI+ A + GSE SG I++V A D+TA T + +R+K+++ RG V+ I
Sbjct: 289 NVVVRN--CIARKGAGLLTCGSETSGSIRNVLAHDLTAYGTGTTLRLKSSMNRGGTVENI 346
Query: 346 YVRRMTMKTMKYVF 359
Y+ R+ ++ ++
Sbjct: 347 YMTRVVADSITHIL 360
>gi|383114377|ref|ZP_09935141.1| parallel beta-helix [Bacteroides sp. D2]
gi|313693916|gb|EFS30751.1| parallel beta-helix [Bacteroides sp. D2]
Length = 511
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 157/325 (48%), Gaps = 49/325 (15%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
FG V D +T+A AI + A GG +++ PG + TG+ + S L + K
Sbjct: 68 FGAVADSTVLSTEAIQKAIDSC---AVIGGGTVVLQPGYYQTGALFIKSGVNLQLDKGVT 124
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLT-----DVVVTGGNATINGQG 176
LLAS P + P F S I G +T +V NA+++G+G
Sbjct: 125 LLAS------PYIHHYP-----------EFRSRIAGIEMTWPAAVINIVNEKNASVSGEG 167
Query: 177 ------EPWWIKY---RKK----------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSW 217
+ +W KY RK+ ++ R I + S ++ + TL+ + W
Sbjct: 168 TLDCRGKVFWDKYWEMRKEYEAKGLRWIVDYDCKRVRGILIERSSDITLKGFTLMRTGFW 227
Query: 218 NVHPVYSSNVLIQGLTIRAPI--DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWD 275
+YS I GLTI I P+TDGI+ DS N +E+ + DD + +KSG D
Sbjct: 228 GCQILYSDYCTIDGLTINNNIGGHGPSTDGIDIDSSCNILVENCDVDCNDDNICIKSGRD 287
Query: 276 EYGIKVGMPTQHLIIRRLICISPDSAA-IALGSEMSGGIKDVRAEDITAINTQSGVRIKT 334
G++V +PT++++IR CI+ A I GSE SG I++V ++ AI T + +R+K+
Sbjct: 288 ADGLRVNLPTENVVIRN--CIARKGAGLITCGSETSGSIRNVLGYNLEAIGTSAVLRLKS 345
Query: 335 AVGRGAYVKEIYVRRMTMKTMKYVF 359
A+ RG ++ IY+ + + +++V
Sbjct: 346 AMNRGGTIENIYMTEVKAENVRHVL 370
>gi|257880502|ref|ZP_05660155.1| glycoside hydrolase [Enterococcus faecium 1,230,933]
gi|257891467|ref|ZP_05671120.1| glycoside hydrolase [Enterococcus faecium 1,231,410]
gi|257894590|ref|ZP_05674243.1| glycoside hydrolase [Enterococcus faecium 1,231,408]
gi|260562501|ref|ZP_05833011.1| glycoside hydrolase, family 28 [Enterococcus faecium C68]
gi|293559900|ref|ZP_06676412.1| glycoside hydrolase, family 28 [Enterococcus faecium E1162]
gi|293568218|ref|ZP_06679552.1| glycoside hydrolase, family 28 [Enterococcus faecium E1071]
gi|314938533|ref|ZP_07845818.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|314942449|ref|ZP_07849289.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|314952938|ref|ZP_07855905.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|314992207|ref|ZP_07857650.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|314995236|ref|ZP_07860348.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|383329848|ref|YP_005355732.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|406581503|ref|ZP_11056645.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|406583794|ref|ZP_11058839.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|406586138|ref|ZP_11061075.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|406591702|ref|ZP_11065948.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410936303|ref|ZP_11368170.1| polygalacturonase [Enterococcus sp. GMD5E]
gi|415891700|ref|ZP_11549789.1| glycoside hydrolase, family 28 [Enterococcus faecium E4453]
gi|416141648|ref|ZP_11599441.1| glycoside hydrolase, family 28 [Enterococcus faecium E4452]
gi|424845982|ref|ZP_18270582.1| polygalacturonase [Enterococcus faecium R501]
gi|424854970|ref|ZP_18279301.1| polygalacturonase [Enterococcus faecium R499]
gi|424907683|ref|ZP_18331153.1| polygalacturonase [Enterococcus faecium R497]
gi|424960554|ref|ZP_18375059.1| polygalacturonase [Enterococcus faecium P1986]
gi|424964733|ref|ZP_18378800.1| polygalacturonase [Enterococcus faecium P1190]
gi|424971125|ref|ZP_18384586.1| polygalacturonase [Enterococcus faecium P1139]
gi|424974628|ref|ZP_18387853.1| polygalacturonase [Enterococcus faecium P1137]
gi|424981126|ref|ZP_18393878.1| polygalacturonase [Enterococcus faecium ERV99]
gi|424983701|ref|ZP_18396276.1| polygalacturonase [Enterococcus faecium ERV69]
gi|424987499|ref|ZP_18399873.1| polygalacturonase [Enterococcus faecium ERV38]
gi|424992279|ref|ZP_18404358.1| polygalacturonase [Enterococcus faecium ERV26]
gi|425007167|ref|ZP_18418312.1| polygalacturonase [Enterococcus faecium ERV1]
gi|425014690|ref|ZP_18425355.1| polygalacturonase [Enterococcus faecium E417]
gi|425021599|ref|ZP_18431838.1| polygalacturonase [Enterococcus faecium C497]
gi|425023083|ref|ZP_18433222.1| polygalacturonase [Enterococcus faecium C1904]
gi|425034686|ref|ZP_18439563.1| polygalacturonase [Enterococcus faecium 514]
gi|425042059|ref|ZP_18446425.1| polygalacturonase [Enterococcus faecium 511]
gi|425046653|ref|ZP_18450650.1| polygalacturonase [Enterococcus faecium 510]
gi|425047905|ref|ZP_18451836.1| polygalacturonase [Enterococcus faecium 509]
gi|425051840|ref|ZP_18455481.1| polygalacturonase [Enterococcus faecium 506]
gi|425060678|ref|ZP_18463962.1| polygalacturonase [Enterococcus faecium 503]
gi|430821821|ref|ZP_19440408.1| glycosyl hydrolase [Enterococcus faecium E0045]
gi|430827440|ref|ZP_19445583.1| glycosyl hydrolase [Enterococcus faecium E0164]
gi|430830082|ref|ZP_19448148.1| glycosyl hydrolase [Enterococcus faecium E0269]
gi|430832646|ref|ZP_19450686.1| glycosyl hydrolase [Enterococcus faecium E0333]
gi|430845573|ref|ZP_19463457.1| glycosyl hydrolase [Enterococcus faecium E1050]
gi|430848406|ref|ZP_19466225.1| glycosyl hydrolase [Enterococcus faecium E1133]
gi|430856188|ref|ZP_19473891.1| glycosyl hydrolase [Enterococcus faecium E1392]
gi|430921156|ref|ZP_19485323.1| glycosyl hydrolase [Enterococcus faecium E1575]
gi|431220446|ref|ZP_19501380.1| glycosyl hydrolase [Enterococcus faecium E1620]
gi|431243678|ref|ZP_19503851.1| glycosyl hydrolase [Enterococcus faecium E1622]
gi|431323331|ref|ZP_19509135.1| glycosyl hydrolase [Enterococcus faecium E1626]
gi|431388094|ref|ZP_19511700.1| glycosyl hydrolase [Enterococcus faecium E1627]
gi|431472779|ref|ZP_19514507.1| glycosyl hydrolase [Enterococcus faecium E1630]
gi|431520920|ref|ZP_19516634.1| glycosyl hydrolase [Enterococcus faecium E1634]
gi|431565479|ref|ZP_19519841.1| glycosyl hydrolase [Enterococcus faecium E1731]
gi|431747812|ref|ZP_19536581.1| glycosyl hydrolase [Enterococcus faecium E2134]
gi|431750357|ref|ZP_19539076.1| glycosyl hydrolase [Enterococcus faecium E2297]
gi|431755435|ref|ZP_19544084.1| glycosyl hydrolase [Enterococcus faecium E2883]
gi|431761409|ref|ZP_19549983.1| glycosyl hydrolase [Enterococcus faecium E3346]
gi|431766527|ref|ZP_19555004.1| glycosyl hydrolase [Enterococcus faecium E4215]
gi|431769102|ref|ZP_19557530.1| glycosyl hydrolase [Enterococcus faecium E1321]
gi|431771653|ref|ZP_19560033.1| glycosyl hydrolase [Enterococcus faecium E1644]
gi|431774523|ref|ZP_19562830.1| glycosyl hydrolase [Enterococcus faecium E2369]
gi|431780630|ref|ZP_19568803.1| glycosyl hydrolase [Enterococcus faecium E4389]
gi|257814730|gb|EEV43488.1| glycoside hydrolase [Enterococcus faecium 1,230,933]
gi|257827827|gb|EEV54453.1| glycoside hydrolase [Enterococcus faecium 1,231,410]
gi|257830969|gb|EEV57576.1| glycoside hydrolase [Enterococcus faecium 1,231,408]
gi|260073186|gb|EEW61531.1| glycoside hydrolase, family 28 [Enterococcus faecium C68]
gi|291589118|gb|EFF20932.1| glycoside hydrolase, family 28 [Enterococcus faecium E1071]
gi|291606172|gb|EFF35594.1| glycoside hydrolase, family 28 [Enterococcus faecium E1162]
gi|313590492|gb|EFR69337.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|313593265|gb|EFR72110.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|313595010|gb|EFR73855.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|313598757|gb|EFR77602.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|313642161|gb|EFS06741.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|364090042|gb|EHM32674.1| glycoside hydrolase, family 28 [Enterococcus faecium E4452]
gi|364093760|gb|EHM35997.1| glycoside hydrolase, family 28 [Enterococcus faecium E4453]
gi|378939542|gb|AFC64614.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|402919810|gb|EJX40376.1| polygalacturonase [Enterococcus faecium R501]
gi|402930037|gb|EJX49740.1| polygalacturonase [Enterococcus faecium R497]
gi|402931903|gb|EJX51454.1| polygalacturonase [Enterococcus faecium R499]
gi|402945951|gb|EJX64271.1| polygalacturonase [Enterococcus faecium P1190]
gi|402947336|gb|EJX65555.1| polygalacturonase [Enterococcus faecium P1986]
gi|402955971|gb|EJX73460.1| polygalacturonase [Enterococcus faecium P1137]
gi|402959993|gb|EJX77186.1| polygalacturonase [Enterococcus faecium P1139]
gi|402964601|gb|EJX81373.1| polygalacturonase [Enterococcus faecium ERV99]
gi|402970834|gb|EJX87147.1| polygalacturonase [Enterococcus faecium ERV69]
gi|402973957|gb|EJX90038.1| polygalacturonase [Enterococcus faecium ERV26]
gi|402974321|gb|EJX90380.1| polygalacturonase [Enterococcus faecium ERV38]
gi|402995601|gb|EJY10044.1| polygalacturonase [Enterococcus faecium ERV1]
gi|402998000|gb|EJY12285.1| polygalacturonase [Enterococcus faecium E417]
gi|403006140|gb|EJY19807.1| polygalacturonase [Enterococcus faecium C497]
gi|403010837|gb|EJY24182.1| polygalacturonase [Enterococcus faecium C1904]
gi|403019832|gb|EJY32411.1| polygalacturonase [Enterococcus faecium 514]
gi|403023546|gb|EJY35791.1| polygalacturonase [Enterococcus faecium 510]
gi|403024469|gb|EJY36625.1| polygalacturonase [Enterococcus faecium 511]
gi|403032233|gb|EJY43801.1| polygalacturonase [Enterococcus faecium 509]
gi|403036566|gb|EJY47912.1| polygalacturonase [Enterococcus faecium 506]
gi|403042389|gb|EJY53347.1| polygalacturonase [Enterococcus faecium 503]
gi|404452562|gb|EJZ99746.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|404456117|gb|EKA02874.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|404461646|gb|EKA07540.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|404467225|gb|EKA12407.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410735249|gb|EKQ77163.1| polygalacturonase [Enterococcus sp. GMD5E]
gi|430438093|gb|ELA48581.1| glycosyl hydrolase [Enterococcus faecium E0045]
gi|430444048|gb|ELA53960.1| glycosyl hydrolase [Enterococcus faecium E0164]
gi|430479137|gb|ELA56411.1| glycosyl hydrolase [Enterococcus faecium E0269]
gi|430479701|gb|ELA56917.1| glycosyl hydrolase [Enterococcus faecium E0333]
gi|430495380|gb|ELA71555.1| glycosyl hydrolase [Enterococcus faecium E1050]
gi|430534977|gb|ELA75402.1| glycosyl hydrolase [Enterococcus faecium E1133]
gi|430545274|gb|ELA85257.1| glycosyl hydrolase [Enterococcus faecium E1392]
gi|430554049|gb|ELA93721.1| glycosyl hydrolase [Enterococcus faecium E1575]
gi|430569541|gb|ELB08542.1| glycosyl hydrolase [Enterococcus faecium E1620]
gi|430571647|gb|ELB10533.1| glycosyl hydrolase [Enterococcus faecium E1622]
gi|430577979|gb|ELB16555.1| glycosyl hydrolase [Enterococcus faecium E1626]
gi|430580359|gb|ELB18832.1| glycosyl hydrolase [Enterococcus faecium E1627]
gi|430583564|gb|ELB21926.1| glycosyl hydrolase [Enterococcus faecium E1630]
gi|430585063|gb|ELB23364.1| glycosyl hydrolase [Enterococcus faecium E1634]
gi|430589388|gb|ELB27517.1| glycosyl hydrolase [Enterococcus faecium E1731]
gi|430604699|gb|ELB42134.1| glycosyl hydrolase [Enterococcus faecium E2134]
gi|430609784|gb|ELB46961.1| glycosyl hydrolase [Enterococcus faecium E2297]
gi|430616657|gb|ELB53552.1| glycosyl hydrolase [Enterococcus faecium E2883]
gi|430621550|gb|ELB58311.1| glycosyl hydrolase [Enterococcus faecium E3346]
gi|430626087|gb|ELB62675.1| glycosyl hydrolase [Enterococcus faecium E4215]
gi|430628018|gb|ELB64476.1| glycosyl hydrolase [Enterococcus faecium E1321]
gi|430632927|gb|ELB69117.1| glycosyl hydrolase [Enterococcus faecium E1644]
gi|430633928|gb|ELB70073.1| glycosyl hydrolase [Enterococcus faecium E2369]
gi|430639085|gb|ELB74967.1| glycosyl hydrolase [Enterococcus faecium E4389]
Length = 436
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 152/320 (47%), Gaps = 35/320 (10%)
Query: 69 KTSNTKAFNTAISNLSKYAADGGAQ----LIVPPGKWLTGSFNLTSHFTLYIHKDALLLA 124
KT++T+ +T I L K A D GA+ + +P G +L G+ L L + A+L
Sbjct: 14 KTNDTQQDDTII--LQK-AIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKG 70
Query: 125 SQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYR 184
D +P + + G P + L + D+++ G I+GQG+ WW Y
Sbjct: 71 RTDIEAFPEIDTRVA-GVEMKWPAAILNVL----SAKDILIEG-KGIIDGQGDHWWELYW 124
Query: 185 KKQ-------------------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSS 225
K + + RP + +++V + +L S WN+ YS+
Sbjct: 125 GKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSN 184
Query: 226 NVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPT 285
+VL++ + IR D P+TDGI+ DS TN R+ + + GDDC+A+KSG D G +V +
Sbjct: 185 DVLVEKVIIRNN-DGPSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKS 243
Query: 286 QHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEI 345
+ + R C + +GSE+S G+ DV DI + G+R+K++ RG ++ I
Sbjct: 244 SRIEVAR--CKIRSGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENI 301
Query: 346 YVRRMTMKTMKYVFWMTGDY 365
V + M +++ F D+
Sbjct: 302 RVENLNMIDVQFPFSWIMDW 321
>gi|257886390|ref|ZP_05666043.1| glycoside hydrolase [Enterococcus faecium 1,231,501]
gi|257822246|gb|EEV49376.1| glycoside hydrolase [Enterococcus faecium 1,231,501]
Length = 436
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 152/320 (47%), Gaps = 35/320 (10%)
Query: 69 KTSNTKAFNTAISNLSKYAADGGAQ----LIVPPGKWLTGSFNLTSHFTLYIHKDALLLA 124
KT++T+ +T I L K A D GA+ + +P G +L G+ L L + A+L
Sbjct: 14 KTNDTQQDDTII--LQK-AIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKG 70
Query: 125 SQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYR 184
D +P + + G P + L + D+++ G I+GQG+ WW Y
Sbjct: 71 RTDIEAFPEIDTRVA-GVEMKWPAAILNVL----SAKDILIEG-KGIIDGQGDHWWELYW 124
Query: 185 KKQ-------------------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSS 225
K + + RP + +++V + +L S WN+ YS+
Sbjct: 125 GKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSN 184
Query: 226 NVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPT 285
+VL++ + IR D P+TDGI+ DS TN R+ + + GDDC+A+KSG D G +V +
Sbjct: 185 DVLVEKVIIRNN-DGPSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKS 243
Query: 286 QHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEI 345
+ + R C + +GSE+S G+ DV DI + G+R+K++ RG ++ I
Sbjct: 244 SRIEVAR--CKIRSGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENI 301
Query: 346 YVRRMTMKTMKYVFWMTGDY 365
V + M +++ F D+
Sbjct: 302 RVENLNMIDVQFPFSWIMDW 321
>gi|257889043|ref|ZP_05668696.1| glycoside hydrolase [Enterococcus faecium 1,141,733]
gi|257825106|gb|EEV52029.1| glycoside hydrolase [Enterococcus faecium 1,141,733]
Length = 412
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 160/349 (45%), Gaps = 40/349 (11%)
Query: 94 LIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSS 153
+ +P G +L G+ L L + A+L + ++E P + + G + ++ +
Sbjct: 16 VFIPKGIYLVGALFLKDKSHLIFEEGAVL---KGKTEIEAFPEIDTRVAGVEM---KWPA 69
Query: 154 LIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQ-------------------FNVTRPY 194
I ++ G I+GQGE WW Y K + + RP
Sbjct: 70 AILNVLSAKDILIEGKGIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYAIKRPR 129
Query: 195 LIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNT 254
+ +++V I +L S WN+ YS++VL++ + IR D P+TDGI+ DS T+
Sbjct: 130 ACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKIIIRHN-DGPSTDGIDIDSSTDV 188
Query: 255 RIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIK 314
RI + + GDDC+A+KSG D G +V + + I R C + +GSE+S G+
Sbjct: 189 RIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIAR--CNIRSGYGVTIGSEVSAGVS 246
Query: 315 DVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDP--G 372
DV DI + G+R+K++ RG ++ I V + M +++ F D+ + +
Sbjct: 247 DVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPFSWIMDWHNEYNRKNS 306
Query: 373 FDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLT 421
D + +P VA+ + +S ++ +RN I + NV L+
Sbjct: 307 NDLERMPESW-----QAVAEEIPESKQMTKVRN-----IHVKNVQASLS 345
>gi|257900361|ref|ZP_05680014.1| glycoside hydrolase [Enterococcus faecium Com15]
gi|257838273|gb|EEV63347.1| glycoside hydrolase [Enterococcus faecium Com15]
Length = 412
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 160/349 (45%), Gaps = 40/349 (11%)
Query: 94 LIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSS 153
+ +P G +L G+ L L + A+L + ++E P + + G + ++ +
Sbjct: 16 VFIPKGIYLVGALFLKDKSHLIFEEGAVL---KGKTEIEAFPEIDTRVAGIEM---KWPA 69
Query: 154 LIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQ-------------------FNVTRPY 194
I ++ G I+GQGE WW Y K + + RP
Sbjct: 70 AILNVLSAKDILIEGKGIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYAIKRPR 129
Query: 195 LIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNT 254
+ +++V I +L S WN+ YS++VL++ + IR D P+TDGI+ DS T+
Sbjct: 130 ACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKVIIRHN-DGPSTDGIDIDSSTDV 188
Query: 255 RIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIK 314
RI + + GDDC+A+KSG D G +V + + I R C + +GSE+S GI
Sbjct: 189 RIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIAR--CNIRSGYGVTIGSEVSAGIS 246
Query: 315 DVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDP--G 372
DV DI + G+R+K++ RG ++ I V + M +++ F D+ + +
Sbjct: 247 DVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPFSWIMDWHNEYNRKNS 306
Query: 373 FDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLT 421
D + +P VA+ + +S ++ +RN I + NV L+
Sbjct: 307 NDLERMPESW-----QAVAEEIPESKQMTKLRN-----IHVKNVQASLS 345
>gi|29349563|ref|NP_813066.1| hypothetical protein BT_4155 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341473|gb|AAO79260.1| pectate lyase [Bacteroides thetaiotaomicron VPI-5482]
Length = 448
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 170/379 (44%), Gaps = 56/379 (14%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+TDFG V G+ NTKA AI +K GG +++VP G WLTG + S+ L + +
Sbjct: 43 ITDFGAVPGGEVDNTKAIAAAIDACNK---AGGGRVVVPAGIWLTGPVHFKSNINLCLEE 99
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
DA+L + + ++ LP + + G + +S L++ +V ++G T+ +
Sbjct: 100 DAVLSFTDNPEDY--LPAVMTSWEGLE--CYNYSPLLYAFECENVAISG-KGTLQPKMGT 154
Query: 179 W--WIK------------YRKKQFNV-------------TRPYLIEVMFSDNVQISNLTL 211
W W K Y K NV RP+LI NV + +
Sbjct: 155 WKVWFKRPAPHLQALKELYTKASTNVPVIERQMAIGENHLRPHLIHFNRCKNVMLDGFKI 214
Query: 212 IDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVK 271
+SP W +H +++ L +RA N DGI+ + N +ED GDD V +K
Sbjct: 215 RESPFWTIHLYMCDGGIVRNLDVRA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVIK 272
Query: 272 SGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGV- 330
+G ++ ++ P ++++IR I + +GSE+SGGI+++ D TA N+ +
Sbjct: 273 AGRNQDAWRLNTPCENIVIRNCR-ILKGHTLLGIGSEISGGIRNIYMHDCTAPNSVMRLF 331
Query: 331 RIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMV 390
+KT RG +++ IY++ + T + V + T ++D+V
Sbjct: 332 FVKTNHRRGGFIENIYMKNVASGTAQRVL-----------------EIDTEVLYQWKDLV 374
Query: 391 ADNVTQSAKLDGIRNDPFT 409
+ ++DGI D T
Sbjct: 375 PTYEKRITRIDGIYMDKVT 393
>gi|224536236|ref|ZP_03676775.1| hypothetical protein BACCELL_01103 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522122|gb|EEF91227.1| hypothetical protein BACCELL_01103 [Bacteroides cellulosilyticus
DSM 14838]
Length = 456
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 189/397 (47%), Gaps = 46/397 (11%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLT-GSFNLTSHFTLYIH 117
+T +G D + A AI+ + +GG +++P G + + G+ L S+ L+I
Sbjct: 53 VTAYGAKSDTSFDSRPAILEAINQCN---TNGGGTVLIPAGNYFSKGAILLKSNVNLHIA 109
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
A L S S++ LP + + G + +S I+ T+V +TG TI+G G
Sbjct: 110 DGARLEFSTVASDY--LPMVLTKWEGTE--CFNYSPFIYAYQCTNVALTG-KGTIDGNGA 164
Query: 178 PWWIKY---------RKKQFNV---------------TRPYLIEVMFSDNVQISNLTLID 213
+ + R +Q + RP +I+ NV + ++ + D
Sbjct: 165 VTFNGWHALQGPALDRLRQMGIDSIPVYERVFGEGYYLRPCMIQFYGCKNVLVEDVQIYD 224
Query: 214 SPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSG 273
SP W +HPV+ NV ++ + I + ++ N DG +P+S TN IE+ GDD +A+KSG
Sbjct: 225 SPFWIIHPVFCDNVTVRNVYIDS--NNYNNDGCDPESSTNVLIENMDFNVGDDGIAIKSG 282
Query: 274 WDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIK 333
D+ G ++G T+++IIR AI +GSEMSGG++++ ED + ++G+ K
Sbjct: 283 RDQDGWRIGQATENVIIRNC---HFARWAITIGSEMSGGVRNIFIEDCKIDSCRNGIYFK 339
Query: 334 TAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTV-TGINYRDMVAD 392
+ + RG Y + + +RR+ W ++ ++ G+ PT+ I D+ +
Sbjct: 340 SNLDRGGYFENLNMRRIEADV---CLWGVINFRTNYH-GYRGGNHPTLFRNICIEDVTCN 395
Query: 393 NVTQSAKL-DGIRNDPFTGICISNVTIKLTEKPKELQ 428
V A + +G+ I + N+ +K + PK +Q
Sbjct: 396 RVDSVALMANGLPEAKLYNITLRNIKVK--QAPKAIQ 430
>gi|431703877|ref|ZP_19525103.1| glycosyl hydrolase [Enterococcus faecium E1904]
gi|430596723|gb|ELB34539.1| glycosyl hydrolase [Enterococcus faecium E1904]
Length = 436
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 152/320 (47%), Gaps = 35/320 (10%)
Query: 69 KTSNTKAFNTAISNLSKYAADGGAQ----LIVPPGKWLTGSFNLTSHFTLYIHKDALLLA 124
KT++T+ +T I L K A D GA+ + +P G +L G+ L L + A+L
Sbjct: 14 KTNDTQQDDTII--LQK-AIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKG 70
Query: 125 SQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYR 184
D +P + + G P + L + D+++ G I+GQG+ WW Y
Sbjct: 71 RTDIEAFPEIDTRVA-GVEMKWPAAILNVL----SAKDILIEG-KGIIDGQGDHWWELYW 124
Query: 185 KKQ-------------------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSS 225
K + + RP + +++V + +L S WN+ YS+
Sbjct: 125 GKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSN 184
Query: 226 NVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPT 285
+VL++ + IR D P+TDGI+ DS TN R+ + + GDDC+A+KSG D G +V +
Sbjct: 185 DVLVEKVIIRNN-DGPSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKS 243
Query: 286 QHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEI 345
+ + R C + +GSE+S G+ DV DI + G+R+K++ RG ++ I
Sbjct: 244 SRIEVAR--CKIRSGYGVTIGSEVSAGVSDVYIRDIDFFQSDCGIRMKSSKERGGVIENI 301
Query: 346 YVRRMTMKTMKYVFWMTGDY 365
V + M +++ F D+
Sbjct: 302 RVENLNMIDVQFPFSWIMDW 321
>gi|256424483|ref|YP_003125136.1| G-D-S-L family lipolytic protein [Chitinophaga pinensis DSM 2588]
gi|256039391|gb|ACU62935.1| lipolytic protein G-D-S-L family [Chitinophaga pinensis DSM 2588]
Length = 727
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 183/433 (42%), Gaps = 75/433 (17%)
Query: 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF 112
R+ + + G DG T N+K N AI+ S+ +GG +++P G WLTG + S+
Sbjct: 265 RRDTLSIVALGAKADGVTLNSKIINAAITKASE---NGGGVVMIPAGLWLTGPIVMKSNV 321
Query: 113 TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTG----- 167
LY+ +ALL + D ++ P + + G R + I N ++ +TG
Sbjct: 322 NLYLAPNALLQFTTDFDQY---PLVETTYEGLK--AMRCQAPISAVNAENIAITGKGIID 376
Query: 168 -----------------------GNATINGQGEPWWIKYRKKQF---------------- 188
+ I G+ + W K Q
Sbjct: 377 GGGDAWRIVKKDKLTESQWKKLLASGGIEGEDKKTWYPSAKSQKGSHTKLAGVIESGKTA 436
Query: 189 -------NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSP 241
+ RP ++ + V + +T +SP+W +HP+ + ++ ++ + + P +
Sbjct: 437 ADYNDIKDFLRPNMLSITSCKYVLLEGVTFQNSPAWCLHPLLTEHITLRDVYAKNPWYAQ 496
Query: 242 NTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSA 301
N DGI+ +SC RIE GDD + +KSG DE G K G+ T+ +I+ +
Sbjct: 497 NGDGIDLESCRYARIEGCTFDVGDDGICIKSGRDEQGRKRGVATEDVIVNNC-TVYHAHG 555
Query: 302 AIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWM 361
+GSEMSGG +++ + + + T G+R KT GRG V++IYV + MK + +
Sbjct: 556 GFVVGSEMSGGARNLFVSNCSFLGTDIGLRFKTTRGRGGIVEKIYVNNINMKDIPAEAIL 615
Query: 362 TGDYGSHPDP----GFDPKAL-----------PTVTGINYRDMVADNVTQSAKLDGIRND 406
Y DP G +A+ P + ++V ++ + G+
Sbjct: 616 LDMYYMAKDPVPLSGEKREAVKVELFPVTDATPQFKDFHISNVVCHGAEKAIFIRGLPEM 675
Query: 407 PFTGICISNVTIK 419
P + I + ++TIK
Sbjct: 676 PISDIHLKDITIK 688
>gi|255691107|ref|ZP_05414782.1| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623460|gb|EEX46331.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 505
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 154/325 (47%), Gaps = 49/325 (15%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
G V D +T A AI + A GG + + PG + TG+ + S L++ K
Sbjct: 63 LGAVADSTVLSTTAIQKAIDSC---AVSGGGTVTLQPGYYQTGALFIKSGVNLHLDKGVT 119
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLT-----DVVVTGGNATINGQG 176
LLAS +P F S + G +T ++ NA+I+G+G
Sbjct: 120 LLASPQIHHYP-----------------EFRSRVAGIEMTWPAAVINIIDEKNASISGEG 162
Query: 177 ------EPWWIKY---RKK----------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSW 217
+ +W KY RK+ ++ R I V S ++ +S TL+ + W
Sbjct: 163 TLDCRGKVFWDKYWEMRKEYEAKGLRWIVDYDCKRVRGILVERSSDITLSGFTLMRTGFW 222
Query: 218 NVHPVYSSNVLIQGLTIRAPI--DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWD 275
+YS + I GLTI I P+TDGI+ DS T+ +E+ I DD + +KSG D
Sbjct: 223 GCQILYSDHCTINGLTINNNIGGHGPSTDGIDIDSSTHVLVENCDIDCNDDNICIKSGRD 282
Query: 276 EYGIKVGMPTQHLIIRRLICISPDSAA-IALGSEMSGGIKDVRAEDITAINTQSGVRIKT 334
G++V PT+ ++IR CI+ A I GSE SG I+++ ++ A T + +R+K+
Sbjct: 283 ADGLRVNRPTEKIVIRN--CIARKGAGLITCGSETSGSIRNILGYNLDAEGTSTVLRLKS 340
Query: 335 AVGRGAYVKEIYVRRMTMKTMKYVF 359
A+ RG V+ IY+ R+ K ++ V
Sbjct: 341 AMNRGGTVENIYMTRINAKNVQQVL 365
>gi|425057510|ref|ZP_18460923.1| polygalacturonase [Enterococcus faecium 504]
gi|403040305|gb|EJY51392.1| polygalacturonase [Enterococcus faecium 504]
Length = 436
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 152/320 (47%), Gaps = 35/320 (10%)
Query: 69 KTSNTKAFNTAISNLSKYAADGGAQ----LIVPPGKWLTGSFNLTSHFTLYIHKDALLLA 124
KT++T+ +T I L K A D GA+ + +P G +L G+ L L + A+L
Sbjct: 14 KTNDTQQDDTII--LQK-AIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKG 70
Query: 125 SQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYR 184
D +P + + G P + L + D+++ G I+GQG+ WW Y
Sbjct: 71 RTDIEAFPEIDTRVA-GVEMKWPAAILNVL----SAKDILIEG-KGIIDGQGDHWWELYW 124
Query: 185 KKQ-------------------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSS 225
K + + RP + +++V + +L S WN+ YS+
Sbjct: 125 GKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSN 184
Query: 226 NVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPT 285
+VL++ + IR D P+TDGI+ DS TN R+ + + GDDC+A+KSG D G +V +
Sbjct: 185 DVLVEKVIIRNN-DGPSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKS 243
Query: 286 QHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEI 345
+ + R C + +GSE+S G+ DV DI + G+R+K++ RG ++ I
Sbjct: 244 SRIEVAR--CKIRSGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGEVIENI 301
Query: 346 YVRRMTMKTMKYVFWMTGDY 365
V + M +++ F D+
Sbjct: 302 RVENLNMIDVQFPFSWIMDW 321
>gi|298482095|ref|ZP_07000283.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271652|gb|EFI13225.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 511
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 157/318 (49%), Gaps = 35/318 (11%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
FG V D +T+A AI + S GG + + PG + TG+ + S L + K
Sbjct: 68 FGAVADSTVLSTEAIQKAIDSCS---VSGGGTVTLQPGYYQTGALFVKSGVNLQLDKGVT 124
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRF----SSLIFGTNLTDVVVTGGNATINGQGE 177
LLAS P + Y R G +++I N + V+G T++ +G+
Sbjct: 125 LLAS---------PHIHHYPEFRSRIAGIEMTWPAAVINIVNEKNAAVSG-EGTLDCRGK 174
Query: 178 PWWIKY---RKK----------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYS 224
+W KY RK+ ++ R I V S +V + TL+ + W +YS
Sbjct: 175 VFWDKYWEMRKEYEAKGLRWIVDYDCKRVRGILVERSSDVTLKGFTLMRTGFWGCQVLYS 234
Query: 225 SNVLIQGLTIRAPI--DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVG 282
+ I GL I + P+TDGI+ DS TN IE+ + DD + +KSG D G++V
Sbjct: 235 NYCTIDGLVINNNLGGHGPSTDGIDIDSSTNILIENCDVDCNDDNICIKSGRDADGLRVN 294
Query: 283 MPTQHLIIRRLICISPDSAA-IALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAY 341
+PT++++IR CI+ A I GSE SG I+++ ++ A+ T + +R+K+A+ RG
Sbjct: 295 LPTENVVIRN--CIARKGAGLITCGSETSGSIRNILGYNLQAVGTSAVLRLKSAMNRGGT 352
Query: 342 VKEIYVRRMTMKTMKYVF 359
++ IY+ + + +++V
Sbjct: 353 IENIYMTDVKAENVRHVL 370
>gi|114841683|dbj|BAF32143.1| pollen allergen [Chamaecyparis obtusa]
Length = 419
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 186/414 (44%), Gaps = 52/414 (12%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGS---FNLTSHFTLY 115
+ +G VGDGK +T+AF TA + K A+ A L+VP K + F L
Sbjct: 31 VEQYGAVGDGKHDSTEAFETAWNAACKKAS---AVLVVPANKKFFVNNLVFRGPCQPHLS 87
Query: 116 IHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQ 175
D ++A D + W + + LTD + G I+GQ
Sbjct: 88 FKVDGTIVAQPDPARWKNSKIWLQFAQ-----------------LTDFNLM-GTGVIDGQ 129
Query: 176 GEPWW------IKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
G+ WW + R + RP I++ +S +V + LTL++SP +++ V I
Sbjct: 130 GQQWWAGQCKVVNGRTVCNDRNRPTAIKIDYSKSVTVKELTLMNSPEFHLVFGECEGVKI 189
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
QGL I+AP DSPNTDGI+ + IE I +GDDC+A+ +G + ++
Sbjct: 190 QGLKIKAPRDSPNTDGIDIFASKRFHIEKCVIGTGDDCIAIGTG-----------SSNIT 238
Query: 290 IRRLICISPDSAAI-ALGSEMS-GGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYV 347
I+ LIC +I +LG + S + V I+TQ+G+RIKT G I
Sbjct: 239 IKDLICGPGHGISIGSLGRDNSRAEVSHVHVNRAKFIDTQNGLRIKTWQGGSGLASYITY 298
Query: 348 RRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSA-KLDGIRND 406
+ M + + Y + + ++ + G+ Y+++ + T +A +L +
Sbjct: 299 ENVEMINSENPILINQFYCTSASACQNQRSAVQIQGVTYKNIHGTSATAAAIQLMCSDSV 358
Query: 407 PFTGICISNVTIKLTE-KPKELQWNCT--NIQGITS-RVTPQACELLPKKEPTD 456
P TGI +SNV++KLT KP +C N +G S R+ P L P P +
Sbjct: 359 PCTGIQLSNVSLKLTSGKPA----SCVDKNARGFYSGRLIPTCKNLRPGPSPKE 408
>gi|293557205|ref|ZP_06675755.1| glycoside hydrolase, family 28 [Enterococcus faecium E1039]
gi|291600657|gb|EFF30959.1| glycoside hydrolase, family 28 [Enterococcus faecium E1039]
Length = 443
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 152/320 (47%), Gaps = 35/320 (10%)
Query: 69 KTSNTKAFNTAISNLSKYAADGGAQ----LIVPPGKWLTGSFNLTSHFTLYIHKDALLLA 124
KT++T+ +T I L K A D GA+ + +P G +L G+ L L + A+L
Sbjct: 21 KTNDTQQDDTII--LQK-AIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKG 77
Query: 125 SQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYR 184
D +P + + G P + L + D+++ G I+GQG+ WW Y
Sbjct: 78 RTDIEAFPEIDTRVA-GVEMKWPAAILNVL----SAKDILIEG-KGIIDGQGDHWWELYW 131
Query: 185 KKQ-------------------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSS 225
K + + RP + +++V + +L S WN+ YS+
Sbjct: 132 GKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSN 191
Query: 226 NVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPT 285
+VL++ + IR D P+TDGI+ DS TN R+ + + GDDC+A+KSG D G +V +
Sbjct: 192 DVLVEKVIIRNN-DGPSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKS 250
Query: 286 QHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEI 345
+ + R C + +GSE+S G+ DV DI + G+R+K++ RG ++ I
Sbjct: 251 SRIEVAR--CKIRSGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENI 308
Query: 346 YVRRMTMKTMKYVFWMTGDY 365
V + M +++ F D+
Sbjct: 309 RVENLNMIDVQFPFSWIMDW 328
>gi|336404047|ref|ZP_08584748.1| hypothetical protein HMPREF0127_02061 [Bacteroides sp. 1_1_30]
gi|295086699|emb|CBK68222.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|335943763|gb|EGN05595.1| hypothetical protein HMPREF0127_02061 [Bacteroides sp. 1_1_30]
Length = 511
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 157/318 (49%), Gaps = 35/318 (11%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
FG V D +T+A AI + S GG + + PG + TG+ + S L + K
Sbjct: 68 FGAVADSTVLSTEAIQKAIDSCS---VSGGGTVTLQPGYYQTGALFVKSGVNLQLDKGVT 124
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRF----SSLIFGTNLTDVVVTGGNATINGQGE 177
LLAS P + Y R G +++I N + V+G T++ +G+
Sbjct: 125 LLAS---------PHIHHYPEFRSRIAGIEMTWPAAVINIVNEKNAAVSG-EGTLDCRGK 174
Query: 178 PWWIKY---RKK----------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYS 224
+W KY RK+ ++ R I V S ++ + TL+ + W +YS
Sbjct: 175 VFWDKYWEMRKEYEAKGLRWIVDYDCKRVRGILVERSSDITLKGFTLMRTGFWGCQVLYS 234
Query: 225 SNVLIQGLTIRAPI--DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVG 282
+ I GL I + P+TDGI+ DS TN IE+ + DD + +KSG D G++V
Sbjct: 235 NYCTIDGLVINNNLGGHGPSTDGIDIDSSTNILIENCDVDCNDDNICIKSGRDADGLRVN 294
Query: 283 MPTQHLIIRRLICISPDSAA-IALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAY 341
+PT++++IR CI+ A I GSE SG I+++ ++ A+ T + +R+K+A+ RG
Sbjct: 295 LPTENIVIRN--CIARKGAGLITCGSETSGSIRNILGYNLQAVGTSAVLRLKSAMNRGGT 352
Query: 342 VKEIYVRRMTMKTMKYVF 359
++ IY+ + + +++V
Sbjct: 353 IENIYMTDVKAENVRHVL 370
>gi|424978123|ref|ZP_18391071.1| polygalacturonase [Enterococcus faecium P1123]
gi|402963044|gb|EJX79942.1| polygalacturonase [Enterococcus faecium P1123]
Length = 426
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 152/320 (47%), Gaps = 35/320 (10%)
Query: 69 KTSNTKAFNTAISNLSKYAADGGAQ----LIVPPGKWLTGSFNLTSHFTLYIHKDALLLA 124
KT++T+ +T I L K A D GA+ + +P G +L G+ L L + A+L
Sbjct: 4 KTNDTQQDDTII--LQK-AIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKG 60
Query: 125 SQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYR 184
D +P + + G P + L + D+++ G I+GQG+ WW Y
Sbjct: 61 RTDIEAFPEIDTRVA-GVEMKWPAAILNVL----SAKDILIEG-KGIIDGQGDHWWELYW 114
Query: 185 KKQ-------------------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSS 225
K + + RP + +++V + +L S WN+ YS+
Sbjct: 115 GKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSN 174
Query: 226 NVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPT 285
+VL++ + IR D P+TDGI+ DS TN R+ + + GDDC+A+KSG D G +V +
Sbjct: 175 DVLVEKVIIRNN-DGPSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKS 233
Query: 286 QHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEI 345
+ + R C + +GSE+S G+ DV DI + G+R+K++ RG ++ I
Sbjct: 234 SRIEVAR--CKIRSGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENI 291
Query: 346 YVRRMTMKTMKYVFWMTGDY 365
V + M +++ F D+
Sbjct: 292 RVENLNMIDVQFPFSWIMDW 311
>gi|431796697|ref|YP_007223601.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787462|gb|AGA77591.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 539
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 169/390 (43%), Gaps = 48/390 (12%)
Query: 64 GVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDA-LL 122
G +G+ + T+ AI S A GG +++VP GKW TG +L S+ ++ + A L
Sbjct: 81 GAKEGELA-TRVIQEAIDEAS---AQGGGKVVVPAGKWKTGRISLKSNVNFHLEEGAELY 136
Query: 123 LASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIK 182
+ Q E P + + R + I+ ++ +TG + P +K
Sbjct: 137 FSGQLEDFRPAV-----FTRHEGVEVMSLGACIYAYQQENIAITGKGTLYGPEEGP--VK 189
Query: 183 YRKKQFNVTR------------------------PYLIEVMFSDNVQISNLTLIDSPSWN 218
+ +VT P I +V I +TL + WN
Sbjct: 190 EQMMTEDVTEKFVPIEKPVAERVYEGYDGASIFLPMFISPTDCKDVYIEGVTLERTAFWN 249
Query: 219 VHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYG 278
+ PVY V+I+G+T+ + + P DGI+ +S N IE + + +GDDC +K+G + G
Sbjct: 250 IVPVYCDGVIIRGVTVNS-VGIPRGDGIDIESSRNVLIEYSTLNNGDDCFTMKAGRGKDG 308
Query: 279 IKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVG 337
I+V PT+++++R C++ + I +GSE +G I ++ D NT G+R KT
Sbjct: 309 IRVNKPTENVVVR--YCLAKEGHGGITIGSETAGKINNLYIHDCVFDNTGVGIRFKTRRP 366
Query: 338 RGAYVKEIYVRRMTMKTMKYVF-W-------MTGDYGSHPDPGFDPKALPTVTGINYRDM 389
RG + +Y R+ M + F W GD P P I +D+
Sbjct: 367 RGGGGQNLYYERLRMNLRQTAFRWDMLGQELYVGDLAKRKPPRAVNDLTPKFKDITIKDI 426
Query: 390 VADNVTQSAKLDGIRNDPFTGICISNVTIK 419
+ + + ++GI P + + NV +K
Sbjct: 427 LVETASTFVNINGIPESPLENLHMENVVVK 456
>gi|262408402|ref|ZP_06084949.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294647547|ref|ZP_06725126.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294807593|ref|ZP_06766388.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345508616|ref|ZP_08788242.1| glycoside hydrolase family 28 [Bacteroides sp. D1]
gi|262353954|gb|EEZ03047.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292637115|gb|EFF55554.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294445208|gb|EFG13880.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345455044|gb|EEO51505.2| glycoside hydrolase family 28 [Bacteroides sp. D1]
Length = 511
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 157/318 (49%), Gaps = 35/318 (11%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
FG V D +T+A AI + S GG + + PG + TG+ + S L + K
Sbjct: 68 FGAVADSTVLSTEAIQKAIDSCS---VSGGGTVTLQPGYYQTGALFVKSGVNLQLDKGVT 124
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRF----SSLIFGTNLTDVVVTGGNATINGQGE 177
LLAS P + Y R G +++I N + V+G T++ +G+
Sbjct: 125 LLAS---------PHIHHYPEFRSRIAGIEMTWPAAVINIVNEKNAAVSG-EGTLDCRGK 174
Query: 178 PWWIKY---RKK----------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYS 224
+W KY RK+ ++ R I V S ++ + TL+ + W +YS
Sbjct: 175 VFWDKYWEMRKEYEKKGLRWIVDYDCKRVRGILVERSSDITLKGFTLMRTGFWGCQVLYS 234
Query: 225 SNVLIQGLTIRAPI--DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVG 282
+ I GL I + P+TDGI+ DS TN IE+ + DD + +KSG D G++V
Sbjct: 235 NYCTIDGLVINNNLGGHGPSTDGIDIDSSTNILIENCDVDCNDDNICIKSGRDADGLRVN 294
Query: 283 MPTQHLIIRRLICISPDSAA-IALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAY 341
+PT++++IR CI+ A I GSE SG I+++ ++ A+ T + +R+K+A+ RG
Sbjct: 295 LPTENIVIRN--CIARKGAGLITCGSETSGSIRNILGYNLQAVGTSAVLRLKSAMNRGGT 352
Query: 342 VKEIYVRRMTMKTMKYVF 359
++ IY+ + + +++V
Sbjct: 353 IENIYMTDVKAENVRHVL 370
>gi|212695092|ref|ZP_03303220.1| hypothetical protein BACDOR_04630 [Bacteroides dorei DSM 17855]
gi|212662408|gb|EEB22982.1| hypothetical protein BACDOR_04630 [Bacteroides dorei DSM 17855]
Length = 475
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 160/330 (48%), Gaps = 43/330 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ D+G V GK NT+A AI +K GG ++++P G+WLTGS + S+ L++ +
Sbjct: 56 IVDYGAVEGGKQKNTEAIAKAIDACNK---AGGGRVVIPAGEWLTGSIHFKSNVNLHLAE 112
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+A++ + D +++ LP + + G + +S L++ ++ +TG G
Sbjct: 113 NAIVRFTDDPADY--LPAVMTSWEGME--CYNYSPLLYAFECENIAITGKGLLKPHMG-L 167
Query: 179 WWIKYRK---------------------------KQFNVTRPYLIEVMFSDNVQISNLTL 211
W + +++ K N RP+LI+ NV + +
Sbjct: 168 WKVWFKRPPAHMEALKELYTMASTDVPVEQRQMAKGENNLRPHLIQFNRCKNVLLDGFHI 227
Query: 212 IDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVK 271
+SP W +H + + L ++A N DGI+ + N IED GDD V +K
Sbjct: 228 EESPFWTIHMYLVDGGIARNLNVKAM--GHNNDGIDLEMTRNFLIEDCVFEQGDDAVVIK 285
Query: 272 SGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITA-INTQSGV 330
SG ++ ++ PT+++++R + ++ + + +GSE+SGG++++ D A N
Sbjct: 286 SGRNQDAWRLNTPTENIVVRNCLVLAGQT-LLGVGSEISGGVRNIYMHDCEAPNNVHRLF 344
Query: 331 RIKTAVGRGAYVKEIYVRRM----TMKTMK 356
IKT RGA+V+ +Y+ ++ T++ M+
Sbjct: 345 FIKTNHRRGAFVENVYMEKIKTGATLRVME 374
>gi|354594579|ref|ZP_09012618.1| hypothetical protein CIN_13140 [Commensalibacter intestini A911]
gi|353672255|gb|EHD13955.1| hypothetical protein CIN_13140 [Commensalibacter intestini A911]
Length = 430
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 152/316 (48%), Gaps = 39/316 (12%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
+GG DG T NT A A+ ++Y GG +++ G WL+G L S+ T + + +
Sbjct: 19 YGGRADGNTINTDAIQKAVDMCAQY---GGGVVLLSKGVWLSGPITLKSNITFSLGQGTV 75
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP-WW 180
L A+ + ++ D P + + I ++ DV + G TI+G G+ WW
Sbjct: 76 LKANNTDDQFK--------NAFIDYPVQKGEAFILADHVHDVSIVG-QGTIDGDGQQTWW 126
Query: 181 IKYR--------------KKQFN-------VTRPYLIEVMFSDNVQISNLTLIDSPSWNV 219
K + K++++ V RP+LIE NV + + L ++P WNV
Sbjct: 127 AKAKQINALLHQGNDQLFKQEYSGVPIANGVPRPWLIEFNDVQNVHLKGVLLTNAPMWNV 186
Query: 220 HPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGI 279
S +V I + I+ P DSPNTDGI+ S +I D I +GDD +++KSG +
Sbjct: 187 VIRSSQDVNIDTIKIQNPKDSPNTDGIDIVSSQYIQISDVDISTGDDNISIKSGLQQGN- 245
Query: 280 KVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRG 339
+P + + I+ + D I++GSE + GI V ++I + +G+RIK+ RG
Sbjct: 246 --ALPARDITIKN--SLMHDGHGISIGSETANGIGKVTIQNIHFSGSTNGIRIKSQRDRG 301
Query: 340 AYVKEIYVRRMTMKTM 355
+ I V + M+ +
Sbjct: 302 NSIGPITVDHIQMENV 317
>gi|237721218|ref|ZP_04551699.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
gi|229449014|gb|EEO54805.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
Length = 495
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 156/325 (48%), Gaps = 49/325 (15%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
FG V D +T+A AI + A GG ++ PG + TG+ + S L + K
Sbjct: 52 FGAVADSTVLSTEAIQKAIDSC---AVIGGGTVVFQPGYYQTGALFIKSGVNLQLDKGVT 108
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLT-----DVVVTGGNATINGQG 176
LLAS P + P F S I G +T +V NA+++G+G
Sbjct: 109 LLAS------PYIHHYP-----------EFRSRIAGIEMTWPAAVINIVNEKNASVSGEG 151
Query: 177 ------EPWWIKY---RKK----------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSW 217
+ +W KY RK+ ++ R I + S ++ + TL+ + W
Sbjct: 152 TLDCRGKVFWDKYWEMRKEYEAKGLRWIVDYDCKRVRGILIERSSDITLKGFTLMRTGFW 211
Query: 218 NVHPVYSSNVLIQGLTIRAPI--DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWD 275
+YS I GLTI I P+TDGI+ DS N +E+ + DD + +KSG D
Sbjct: 212 GCQILYSDYCTIDGLTINNNIGGHGPSTDGIDIDSSCNILVENCDVDCNDDNICIKSGRD 271
Query: 276 EYGIKVGMPTQHLIIRRLICISPDSAA-IALGSEMSGGIKDVRAEDITAINTQSGVRIKT 334
G++V +PT++++IR CI+ A I GSE SG I++V ++ AI T + +R+K+
Sbjct: 272 ADGLRVNLPTENVVIRN--CIARKGAGLITCGSETSGSIRNVLGYNLEAIGTSAVLRLKS 329
Query: 335 AVGRGAYVKEIYVRRMTMKTMKYVF 359
A+ RG ++ IY+ + + +++V
Sbjct: 330 AMNRGGTIENIYMTEVKAENVRHVL 354
>gi|257897638|ref|ZP_05677291.1| glycoside hydrolase [Enterococcus faecium Com12]
gi|257834203|gb|EEV60624.1| glycoside hydrolase [Enterococcus faecium Com12]
Length = 412
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 162/349 (46%), Gaps = 40/349 (11%)
Query: 94 LIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSS 153
+ +P G +L G+ L L + A+L + ++E P + + G + ++ +
Sbjct: 16 VFIPKGIYLVGALFLKDKSHLIFEEGAVL---KGKTEIEAFPEIDTRVAGVEM---KWPA 69
Query: 154 LIFGTNLTDVVVTGGNATINGQGEPWW-------------IKYRKK------QFNVTRPY 194
I ++ G I+GQGE WW +Y +K + + RP
Sbjct: 70 AILNVLSAKDILIEGKGIIDGQGEHWWELYWGEDQKSGTRAEYDRKGLRWIADYAIKRPR 129
Query: 195 LIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNT 254
+ +++V I +L S WN+ YS++VL++ + IR D P+TDGI+ DS T+
Sbjct: 130 ACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKIIIRHN-DGPSTDGIDIDSSTDV 188
Query: 255 RIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIK 314
RI + + GDDC+A+KSG D G +V + + I R C + +GSE+S G+
Sbjct: 189 RIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIAR--CNIRSGYGVTIGSEVSAGVS 246
Query: 315 DVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDP--G 372
DV DI + G+R+K++ RG ++ I V + M +++ F D+ + +
Sbjct: 247 DVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPFSWIMDWHNEYNRKNS 306
Query: 373 FDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLT 421
D + +P VA+ + +S ++ +RN I + NV L+
Sbjct: 307 NDLERMPESW-----QAVAEEIPESKQMTKVRN-----IHVKNVQASLS 345
>gi|293370061|ref|ZP_06616627.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|299148453|ref|ZP_07041515.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|423288960|ref|ZP_17267811.1| parallel beta-helix [Bacteroides ovatus CL02T12C04]
gi|292634853|gb|EFF53376.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|298513214|gb|EFI37101.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|392668724|gb|EIY62218.1| parallel beta-helix [Bacteroides ovatus CL02T12C04]
Length = 511
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 156/325 (48%), Gaps = 49/325 (15%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
FG V D +T+A AI + A GG ++ PG + TG+ + S L + K
Sbjct: 68 FGAVADSTVLSTEAIQKAIDSC---AVIGGGTVVFQPGYYQTGALFIKSGVNLQLDKGVT 124
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLT-----DVVVTGGNATINGQG 176
LLAS P + P F S I G +T +V NA+++G+G
Sbjct: 125 LLAS------PYIHHYP-----------EFRSRIAGIEMTWPAAVINIVNEKNASVSGEG 167
Query: 177 ------EPWWIKY---RKK----------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSW 217
+ +W KY RK+ ++ R I + S ++ + TL+ + W
Sbjct: 168 TLDCRGKVFWDKYWEMRKEYEAKGLRWIVDYDCKRVRGILIERSSDITLKGFTLMRTGFW 227
Query: 218 NVHPVYSSNVLIQGLTIRAPI--DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWD 275
+YS I GLTI I P+TDGI+ DS N +E+ + DD + +KSG D
Sbjct: 228 GCQILYSDYCTIDGLTINNNIGGHGPSTDGIDIDSSCNILVENCDVDCNDDNICIKSGRD 287
Query: 276 EYGIKVGMPTQHLIIRRLICISPDSAA-IALGSEMSGGIKDVRAEDITAINTQSGVRIKT 334
G++V +PT++++IR CI+ A I GSE SG I++V ++ AI T + +R+K+
Sbjct: 288 ADGLRVNLPTENVVIRN--CIARKGAGLITCGSETSGSIRNVLGYNLEAIGTSAVLRLKS 345
Query: 335 AVGRGAYVKEIYVRRMTMKTMKYVF 359
A+ RG ++ IY+ + + +++V
Sbjct: 346 AMNRGGTIENIYMTEVKAENVRHVL 370
>gi|325300073|ref|YP_004259990.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319626|gb|ADY37517.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 458
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 175/392 (44%), Gaps = 43/392 (10%)
Query: 58 VLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
V+T +G K NT+A AI ++ GG +++VP G+W TG +L S+ LY+
Sbjct: 51 VITKYGASHADKKKNTRALAKAIEACNR---AGGGRVVVPAGEWFTGPVHLKSNVNLYLE 107
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
+ A+L S D +++ LP + + G + +S L++ +V +T G + +
Sbjct: 108 EGAVLRFSDDPADY--LPAVMTSWEGLE--CYNYSPLVYAFECENVAIT-GKGVLAPDMD 162
Query: 178 PWWIKYRKKQF---------------------------NVTRPYLIEVMFSDNVQISNLT 210
W I +++ Q N RP+LI +V +
Sbjct: 163 TWKIWFKRPQAHLHALAQLYSMASTDVPVELRQMARGENHLRPHLIHFNRCKHVLLDGFK 222
Query: 211 LIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAV 270
+ SP W +H ++ +++ L ++A N DGI+ + N +E GDD V +
Sbjct: 223 IRQSPFWTIHLYMCNSGVVRNLDVQA--HGHNNDGIDFEMSRNFLVEHCTFDQGDDAVVI 280
Query: 271 KSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINT-QSG 329
KSG ++ ++ P +++++R I + +GSEMSGG++++ D T + Q
Sbjct: 281 KSGRNQDAWRLNTPCENIVVRH-CAIRKGHVLLGIGSEMSGGVRNIYMHDCTVPESVQRL 339
Query: 330 VRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPD---PGFDPKALPTVTGINY 386
+KT RG +++ IY+ + M F + D P ++ K L + GI
Sbjct: 340 FFLKTNHRRGGFIENIYLENIEAGDMLRAFEIDTDVLYQWKDLVPTYERK-LTRIKGIYM 398
Query: 387 RDMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
+++ + +L G + +P + I NV +
Sbjct: 399 KNVHCKSADAIYELKGEKEEPIRDVFIENVKV 430
>gi|423226065|ref|ZP_17212531.1| hypothetical protein HMPREF1062_04717 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392630583|gb|EIY24571.1| hypothetical protein HMPREF1062_04717 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 466
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 189/397 (47%), Gaps = 46/397 (11%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLT-GSFNLTSHFTLYIH 117
+T +G D + A AI+ + +GG +++P G + + G+ L S+ L++
Sbjct: 63 VTAYGAKSDTSFDSRPAILEAINQCN---TNGGGTVLIPAGNYFSKGTILLKSNVNLHVA 119
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
A L S S++ LP + + G + +S I+ T+V +TG TI+G G
Sbjct: 120 DGARLEFSTVASDY--LPMVLTKWEGTE--CFNYSPFIYAYQCTNVALTG-KGTIDGNGA 174
Query: 178 PWWIKY---------RKKQFNV---------------TRPYLIEVMFSDNVQISNLTLID 213
+ + R +Q + RP +I+ NV + ++ + D
Sbjct: 175 VTFNGWHALQGPALDRLRQMGIDSIPVYERVFGEGYYLRPCMIQFYGCKNVLVEDVQIYD 234
Query: 214 SPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSG 273
SP W +HPV+ NV ++ + I + ++ N DG +P+S TN IE+ GDD +A+KSG
Sbjct: 235 SPFWIIHPVFCDNVTVRNVYIDS--NNYNNDGCDPESSTNVLIENMDFNVGDDGIAIKSG 292
Query: 274 WDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIK 333
D+ G ++G T+++IIR AI +GSEMSGG++++ ED + ++G+ K
Sbjct: 293 RDQDGWRIGQATENVIIRNC---HFARWAITIGSEMSGGVRNIFIEDCKIDSCRNGIYFK 349
Query: 334 TAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTV-TGINYRDMVAD 392
+ + RG Y + + +RR+ W ++ ++ G+ PT+ I D+ +
Sbjct: 350 SNLDRGGYFENLNMRRIEADV---CLWGVINFRTNYH-GYRGGNHPTLFRNICIEDVTCN 405
Query: 393 NVTQSAKL-DGIRNDPFTGICISNVTIKLTEKPKELQ 428
V A + +G+ I + N+ +K + PK +Q
Sbjct: 406 RVDSVALMANGLPEAKLYNITLRNIKVK--QAPKAIQ 440
>gi|300728050|ref|ZP_07061423.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299774652|gb|EFI71271.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 463
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 149/316 (47%), Gaps = 49/316 (15%)
Query: 73 TKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWP 132
T A N AI+ S+ GG +I+P G W TG L S+ L++ A LL S D
Sbjct: 64 TAAINEAINTCSQ---QGGGHVIIPDGTWKTGPIRLKSNVDLHLSDKAHLLFSTDPR--- 117
Query: 133 LLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP--WWIKYRKK---- 186
+ P + + G D S LI+ ++ +T G ++GQ + W K R+
Sbjct: 118 IFPTVLTREEGID--CYNISPLIYAYGEKNIAIT-GKGIMDGQSDETNWQKKERRNIQKD 174
Query: 187 ------------QFNVT---------------RPYLIEVMFSDNVQISNLTLIDSPSWNV 219
++ V RP + +NV I T SP W +
Sbjct: 175 SKGKIGERNLLLEYKVNRTPIEQRRFEGMMGMRPQFVNTYKCENVLIEGPTFNRSPFWIL 234
Query: 220 HPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGI 279
HP+ S NV+++ + + + N DG +P+SC N IE +GDDC+A+KSG DE G
Sbjct: 235 HPLLSKNVIVRDVNLDS--HGRNNDGCDPESCENVLIERCRFNTGDDCIAIKSGKDEDGR 292
Query: 280 KVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRAED--ITAINTQSGVRIKTAV 336
+P++++IIR C D A + +GSE++GG ++V E+ + + N +RIK+
Sbjct: 293 VWNIPSKNIIIRN--CEMKDGHAGVGIGSEITGGCENVWVENCKMDSPNLTRVIRIKSNP 350
Query: 337 GRGAYVKEIYVRRMTM 352
RG VK +YVR + +
Sbjct: 351 ERGGEVKNLYVRNVEV 366
>gi|425055006|ref|ZP_18458501.1| polygalacturonase [Enterococcus faecium 505]
gi|403034856|gb|EJY46278.1| polygalacturonase [Enterococcus faecium 505]
Length = 436
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 152/327 (46%), Gaps = 33/327 (10%)
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQ---LIVPPGKWLTGSFNLTSHFTLYIH 117
+F D KT++ + +T + L K G + + +P G +L G+ L L
Sbjct: 6 EFINALDFKTNDIQQDDTVM--LQKAINQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFE 63
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
+ A+L + ++E P + + G + ++ + + ++ G I+GQGE
Sbjct: 64 EGAVL---KGKTEIEAFPEIDTRVAGIEM---KWPAAVLNVLSAKDILIEGKGIIDGQGE 117
Query: 178 PWWIKYRKKQ-------------------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWN 218
WW Y K + + RP + +++V I +L S WN
Sbjct: 118 HWWELYWGKDQKSGTRAEYDRKGLRWIADYAIKRPRACLLYHAEHVVIRDLIFQKSGFWN 177
Query: 219 VHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYG 278
+ YS++VL++ + IR D P+TDGI+ DS T+ RI + + GDDC+A+KSG D G
Sbjct: 178 LQITYSNDVLVEKVIIRHN-DGPSTDGIDIDSSTDVRIYECDLACGDDCIAIKSGRDGNG 236
Query: 279 IKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGR 338
+V + + I R C + +GSE+S G+ DV DI + G+R+K++ R
Sbjct: 237 ARVNRKSSRIEIAR--CNIRSGYGVTIGSEVSAGVSDVYIHDINFFQSDCGIRMKSSRER 294
Query: 339 GAYVKEIYVRRMTMKTMKYVFWMTGDY 365
G ++ I V + M +++ F D+
Sbjct: 295 GGVIENIRVENLNMMDVQFPFSWIMDW 321
>gi|423301868|ref|ZP_17279891.1| hypothetical protein HMPREF1057_03032 [Bacteroides finegoldii
CL09T03C10]
gi|408470959|gb|EKJ89491.1| hypothetical protein HMPREF1057_03032 [Bacteroides finegoldii
CL09T03C10]
Length = 752
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 179/397 (45%), Gaps = 43/397 (10%)
Query: 58 VLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
V+TD+G G+T NTKA AI K GG +++VP G WLTG + S+ LY+
Sbjct: 343 VITDYGAKSGGETDNTKAIAAAIEACYK---AGGGRVVVPDGIWLTGPIHFKSNVNLYLE 399
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
++A+L S + ++ LP + + G + +S L++ +V ++ G T+ +
Sbjct: 400 ENAVLSFSDNPKDY--LPAVMTSWEGLE--CYNYSPLLYAFECENVAIS-GKGTLQPKMG 454
Query: 178 PWWIKYRKKQ---------------------------FNVTRPYLIEVMFSDNVQISNLT 210
W + +++ Q N RP+LI N+Q+
Sbjct: 455 TWRVWFKRPQPHLEALKELYTKASTGVPVEERQMAVGENNLRPHLIHFNRCKNIQLEGFR 514
Query: 211 LIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAV 270
+ +SP W +H +++ L +RA N DGI+ + N +E+ GDD V +
Sbjct: 515 IRESPFWTIHIYMCDGGVVRNLDVRA--HGHNNDGIDFEMSKNFLVENCSFDQGDDAVVI 572
Query: 271 KSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINT-QSG 329
K+G ++ ++ P ++++IR I + +GSE+SGGI+++ D T N+
Sbjct: 573 KAGRNQDAWRLNTPCENIVIRNC-QILKGHTLLGIGSEISGGIRNIYMHDCTVPNSVMRL 631
Query: 330 VRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPD---PGFDPKALPTVTGINY 386
+KT RG +++ IY++ + ++ V + + P ++ K L + G+
Sbjct: 632 FFVKTNHRRGGFIENIYMKDVNAGNVQRVLEIDTEVLYQWKDLVPTYE-KRLTRIDGVYM 690
Query: 387 RDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEK 423
+ ++ +L G P + I +V + L K
Sbjct: 691 EGVTCESADAIYELKGNAQLPVENVAIKDVKVGLLRK 727
>gi|374312327|ref|YP_005058757.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358754337|gb|AEU37727.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 543
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 175/392 (44%), Gaps = 54/392 (13%)
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDA 120
D G GDG T NT A A+ + +++PPG +L+G L SH TL++ A
Sbjct: 34 DTGARGDGHTLNTNALQKAVDQAAAAGG---GVVVIPPGDFLSGGLVLRSHVTLHLEAGA 90
Query: 121 LLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW 180
+L S ++ P P G D G L+F + D+ +TG + TI+G G +W
Sbjct: 91 ILRGSPRVEDYEYRPGPPVEG---DSNG---HHLLFALDAEDIAITG-HGTIDGGGSAFW 143
Query: 181 IKYRKKQFNVTRPY---------------------LIEVMFSDNVQISNLTLIDSPSWNV 219
+K + RP +IE+ NV+I +TL ++P W +
Sbjct: 144 ---HRKGRSTPRPEDLWGDVIAWDYEPATPRRPSPMIELARCRNVRIEGVTLTNAPGWTL 200
Query: 220 HPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGI 279
PV VLI+G+ +R PI +PNTDG++ +C N + D I +GDD + +KS + YG
Sbjct: 201 RPVACETVLIRGIRVRNPIYAPNTDGMDITACRNVFVSDCDIATGDDAICIKS-ENPYGE 259
Query: 280 KVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKD-------VRAEDITAINTQSGVRI 332
+PT+++ + + +S +G+ G +++ + E T +N ++ I
Sbjct: 260 L--LPTKNITVTNCV-LSTCCNGFKVGTSTHGRVENIVFSNSVIYNESTTPLNERATSGI 316
Query: 333 KTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVA 391
V G + + + + M+ + +F G P + GI + + A
Sbjct: 317 ALEVVDGGSMSGVLISNIQMENARTPLFVRLGRR--------KPAQGSFLRGIRFEQIHA 368
Query: 392 DNVTQSAKLDGIRNDPFTGICISNVTIKLTEK 423
++ + G+ + P + I+N + +++E
Sbjct: 369 TGALLTSSITGLPDMPVEDVVIANSSFRMSEH 400
>gi|383120496|ref|ZP_09941224.1| hypothetical protein BSIG_2496 [Bacteroides sp. 1_1_6]
gi|382985014|gb|EES68535.2| hypothetical protein BSIG_2496 [Bacteroides sp. 1_1_6]
Length = 462
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 168/379 (44%), Gaps = 56/379 (14%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+TDFG V G+ NTKA AI +K GG +++VP G WLTG + S+ L + +
Sbjct: 54 ITDFGAVPGGEVDNTKAIAAAIDACNK---AGGGRVVVPAGIWLTGPVHFKSNVNLCLEE 110
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
DA+L + + ++ LP + + G + +S L++ +V ++G T+ +
Sbjct: 111 DAVLSFTDNPEDY--LPAVMTSWEGLE--CYNYSPLLYAFECENVAISG-KGTLQPKMGT 165
Query: 179 W--WIK------------YRKKQFNV-------------TRPYLIEVMFSDNVQISNLTL 211
W W K Y K NV RP+LI NV + +
Sbjct: 166 WKVWFKRPAPHLQALKELYTKASTNVPVIERQMATGENHLRPHLIHFNRCKNVMLDGFKI 225
Query: 212 IDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVK 271
+SP W +H +++ L +RA N DGI+ + N +ED GDD V +K
Sbjct: 226 RESPFWTIHLYMCDGGIVRNLDVRA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVIK 283
Query: 272 SGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITA-INTQSGV 330
+G ++ ++ P ++++IR I + +GSE+SGGI+++ D TA +
Sbjct: 284 AGRNQDAWRLNTPCENIVIRNCR-ILKGHTLLGIGSEISGGIRNIYMHDCTAPYSVMRLF 342
Query: 331 RIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMV 390
+KT RG +++ IY++ + T + V + T ++D+V
Sbjct: 343 FVKTNHRRGGFIENIYMKNVASGTAQRVL-----------------EIDTEVLYQWKDLV 385
Query: 391 ADNVTQSAKLDGIRNDPFT 409
+ ++DGI D T
Sbjct: 386 PTYEKRITRIDGIYMDKVT 404
>gi|298482100|ref|ZP_07000288.1| glycoside Hydrolase Family 28 [Bacteroides sp. D22]
gi|298271657|gb|EFI13230.1| glycoside Hydrolase Family 28 [Bacteroides sp. D22]
Length = 460
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 172/382 (45%), Gaps = 60/382 (15%)
Query: 58 VLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIH 117
++TD+G G+ +NTKA AI K GG +++VP G WLTG + S+ LY+
Sbjct: 53 LITDYGAKNGGEVNNTKAIAAAIEACHK---SGGGRVVVPAGIWLTGPIHFKSNVNLYLE 109
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
++A+L + + ++ LP + + G + +S L++ +V +T G T+ + +
Sbjct: 110 ENAILNFTDNPFDY--LPAVMTSWEGLE--CYNYSPLLYAFECENVAIT-GKGTLQPKMD 164
Query: 178 PWWIKYRKKQ---------------------------FNVTRPYLIEVMFSDNVQISNLT 210
W + +++ Q N RP+LI NV +
Sbjct: 165 TWKVWFKRPQPHLEALKELYTKASTDVPVIERQMAVGENHLRPHLIHFNRCKNVLLDGFK 224
Query: 211 LIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAV 270
+ +SP W +H L++ L ++A N DGI+ + N +ED GDD V +
Sbjct: 225 IRESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVI 282
Query: 271 KSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGV 330
K+G ++ ++ P ++++IR I + +GSE+SGGI+++ D TA N+ +
Sbjct: 283 KAGRNQDAWRLNTPCENIVIRNCQ-ILKGHTLLGIGSEISGGIRNIYMHDCTAPNSVMRL 341
Query: 331 -RIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINY--R 387
+KT RG +++ +Y++ + G + L T + Y +
Sbjct: 342 FFVKTNHRRGGFIENVYMKNV-------------------QAGMAQRVLEIDTEVLYQWK 382
Query: 388 DMVADNVTQSAKLDGIRNDPFT 409
D+V + ++DGI D T
Sbjct: 383 DLVPTYEERITRIDGIYMDKVT 404
>gi|225872229|ref|YP_002753684.1| glycosyl hydrolase, family 28 [Acidobacterium capsulatum ATCC
51196]
gi|225792218|gb|ACO32308.1| glycosyl hydrolase, family 28 [Acidobacterium capsulatum ATCC
51196]
Length = 468
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 153/307 (49%), Gaps = 26/307 (8%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
+G GDG T +T+A A+ +K G A + PG + TG+ + S TL I
Sbjct: 35 YGAKGDGITLDTRAIQAALDAAAK---KGPATVTFAPGTYRTGALFVKSGTTLRIGAGVT 91
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWI 181
L A + +PL+ + G P +++I DV +TG + T++G G+ WW
Sbjct: 92 LRAVHGLANYPLIKTRVA-GIDMHWP----AAVINVYRQHDVHITG-SGTVDGNGKYWWD 145
Query: 182 KY--RKKQFNVT-----------RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
Y +KQ+++ RP LIE S +V ++ L L+ SP W VH YS+ V
Sbjct: 146 GYWALRKQYDLRGLRWAADYDDRRPRLIEFYQSQHVSLAGLHLLRSPFWTVHICYSAYVH 205
Query: 229 IQGLTIRAPID--SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQ 286
+ G+TIR I P+TDG++ DS + +E I DD + +K+G D G++V P
Sbjct: 206 VDGITIRNNIGGRGPSTDGVDIDSSRHVLVEHADISVNDDALCLKAGRDSDGLRVNKPDV 265
Query: 287 HLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAI-NTQSGVRIKTAVGRGAYVKEI 345
++IR + +AA +GSE SGG ++V +I A+ + SGV K+A RG + I
Sbjct: 266 DIVIRNC-TVRYGAAAFTIGSETSGGFRNVDVYNIHALEHVPSGVLFKSAHTRGGWADNI 324
Query: 346 YVRRMTM 352
+ +
Sbjct: 325 RIHDFQL 331
>gi|297743439|emb|CBI36306.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 146/322 (45%), Gaps = 50/322 (15%)
Query: 49 ALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNL 108
ALN R + + DFG +GDG T +++AF A W
Sbjct: 116 ALNGRTTTFNVLDFGAIGDGVTDDSQAFLKA---------------------WNAVCTAR 154
Query: 109 TSHFTLYIHKDALLLASQDESEWPLLPPLP--------SYGRGRDEPGGRFSSLIFGTNL 160
T+ L I + L S P PP + + R G LIF
Sbjct: 155 TTSAMLIIQRKKTFLLSPTVFSGPCKPPQIHVLVLGDITAPKTRSAWGRSSYWLIF--QY 212
Query: 161 TDVVVTGGNATINGQGEPWW--IKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWN 218
D + G T++GQG WW + Y+++ N T Y + F +N+QI L +I+SPS +
Sbjct: 213 IDGFIINGKGTLDGQGSSWWPSLYYKQELLNDTNSYALGFSFCNNLQIYGLNVINSPSKH 272
Query: 219 VHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYG 278
V + ++ L I+AP +SPNTDGI C+ ++ DN I +GDDCVA+ G
Sbjct: 273 VKLFRCNGAILSNLNIKAPKESPNTDGIVIGECSQIQVHDNNIGTGDDCVAILKG----- 327
Query: 279 IKVGMPTQHLIIRRLICISPDSAAIALGS-EMSGG---IKDVRAEDITAINTQSGVRIKT 334
+ ++ I R+ C I++GS M+G ++++ +D + TQ+G+RIKT
Sbjct: 328 ------SSNINISRVAC--GPGHGISIGSLGMNGAYDTVEEIHVQDCSFTGTQNGIRIKT 379
Query: 335 AVGRGAYVKEIYVRRMTMKTMK 356
G Y ++I + +T+ +
Sbjct: 380 WQGGSGYARKISFQGITLNAAE 401
>gi|109509140|gb|ABG34279.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 201
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 100/177 (56%), Gaps = 2/177 (1%)
Query: 274 WDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIK 333
WDEYGI P+ +++IR L+ S SA I++GSEMSGG+ +V E++ +++ VRIK
Sbjct: 1 WDEYGISYKRPSTNILIRNLVVRSMVSAGISIGSEMSGGVSNVTVENLPVWDSRRAVRIK 60
Query: 334 TAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADN 393
TA GRG YV++I R +T + ++ + DY HPD G+D KA P + I++ +
Sbjct: 61 TAPGRGGYVQDITYRNITFENVRVGIVIKTDYNEHPDEGYDRKAFPILQRISFIGVHGQG 120
Query: 394 VTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQG-ITSRVTPQACELL 449
V ++ G P + ++++ LT K K + + C +QG + + P CE L
Sbjct: 121 VRVPVRIHGSEEIPVRNVTFQDMSVGLTYKKKHI-FQCAFVQGRVIGSIFPAPCENL 176
>gi|298383811|ref|ZP_06993372.1| glycoside Hydrolase Family 28 [Bacteroides sp. 1_1_14]
gi|298263415|gb|EFI06278.1| glycoside Hydrolase Family 28 [Bacteroides sp. 1_1_14]
Length = 464
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 170/379 (44%), Gaps = 56/379 (14%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+TDFG V G+ NTKA AI +K GG +++VP G WLTG + S+ L + +
Sbjct: 56 ITDFGAVPGGEVDNTKAIAAAIDACNK---AGGGRVVVPAGIWLTGPVHFKSNINLCLEE 112
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+A+L + + ++ LP + + G + +S L++ +V ++G T+ +
Sbjct: 113 NAVLSFTDNPEDY--LPAVMTSWEGLE--CYNYSPLLYAFECENVAISG-KGTLQPKMGT 167
Query: 179 W--WIK------------YRKKQFNV-------------TRPYLIEVMFSDNVQISNLTL 211
W W K Y K NV RP+LI NV + +
Sbjct: 168 WKVWFKRPAPHLQALKELYTKASTNVPVIERQMATGENHLRPHLIHFNRCKNVMLDGFKI 227
Query: 212 IDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVK 271
+SP W +H +++ L +RA N DGI+ + N +ED GDD V +K
Sbjct: 228 RESPFWTIHLYMCDGGIVRNLDVRA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVIK 285
Query: 272 SGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGV- 330
+G ++ ++ P ++++IR I + +GSE+SGGI+++ D TA N+ +
Sbjct: 286 AGRNQDAWRLNTPCENIVIRNCR-ILKGHTLLGIGSEISGGIRNIYMHDCTAPNSVMRLF 344
Query: 331 RIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMV 390
+KT RG +++ IY++ + T + V + T ++D+V
Sbjct: 345 FVKTNHRRGGFIENIYMKNVASGTAQRVL-----------------EIDTEVLYQWKDLV 387
Query: 391 ADNVTQSAKLDGIRNDPFT 409
+ ++DGI D T
Sbjct: 388 PTYEKRITRIDGIYMDKVT 406
>gi|315570522|gb|ADU33265.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 409
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 168/365 (46%), Gaps = 24/365 (6%)
Query: 68 GKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQD 127
G +TK AI SK + G + P G + TG L SH TL I ALLL +
Sbjct: 36 GHIVSTKGITAAIREASK---NNGGVVHFPKGIYRTGPIQLRSHVTLQIDNGALLLFEDN 92
Query: 128 ESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQ 187
++ L PP+ + ++ LI ++ +TG ++G G +WIK
Sbjct: 93 QN---LYPPVNVTLPSGEVIALSYTPLISAFGQRNISITG-RGMLDGSGA-FWIKLLPPP 147
Query: 188 FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDS----PNT 243
TRP+ + + S V + + + +SP +NVH +S++ I+G+TI P ++ PNT
Sbjct: 148 --STRPFFLYFVESQEVLLEGVHIKNSPMYNVHFKDTSHITIKGITITNPENTVDPGPNT 205
Query: 244 DGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAI 303
DGIN D C + + I +GDD + +K+ K PT+H++I I A I
Sbjct: 206 DGINCDPCRYLHVSNVTISTGDDAIVMKADMRGRTSKQLKPTEHVLIENSF-IFVGHAGI 264
Query: 304 ALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTG 363
++GS +GG++++ + T G+ IKTA RG V++I+ +TM ++
Sbjct: 265 SMGSATAGGLRNITVRNCLFNGTNRGIYIKTARDRGGKVEDIHYHNITMLNIRKEGVAIA 324
Query: 364 DYGSHPDPGFDPKAL---------PTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICIS 414
D + D G + + P + I ++ + ++ +S + G+ P I
Sbjct: 325 DVYNGTDEGLHERNVYPQPVTENTPFIGNIEFQGIRGNSKLESIFIVGLPESPVVNITFK 384
Query: 415 NVTIK 419
+ + K
Sbjct: 385 DFSAK 389
>gi|302875124|ref|YP_003843757.1| glycoside hydrolase family protein [Clostridium cellulovorans 743B]
gi|307690250|ref|ZP_07632696.1| glycoside hydrolase family 28 [Clostridium cellulovorans 743B]
gi|302577981|gb|ADL51993.1| glycoside hydrolase family 28 [Clostridium cellulovorans 743B]
Length = 510
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 150/328 (45%), Gaps = 59/328 (17%)
Query: 91 GAQLIVP-------PGKWLTGSFNLTSHFTLYIHKDALLLASQDESE--WPLLPPLPSYG 141
G ++I+P P + TG+ L S+ L I K+A+L ++++ +PL+ Y
Sbjct: 104 GGKVIIPGSENPEAPNVYYTGAITLKSNVILEIQKNAILRFVRNKTNEFYPLV-----YT 158
Query: 142 RGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE-----PWWIKYRKKQ--------- 187
R FS I+ ++ + G ++G + PW Y K++
Sbjct: 159 RWEGVEMMNFSPFIYSYEAENIAIVG-EGVLDGNADEFNWMPWKFGYFKEEDQQIQRERL 217
Query: 188 -------------------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
+ RP I+ S N+ I ++ +I+SP W ++PV N+
Sbjct: 218 FELGQKNADVRTERIFGDDVSTIRPPFIQPYKSKNILIKDVKIINSPFWEINPVLCENIK 277
Query: 229 IQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHL 288
+ I+ + N DG++P+SC + IE+ Y ++GDDC+A+KSG + G +G+PT+++
Sbjct: 278 VD--NIKVGTNLYNNDGVDPESCKDMIIENCYFLTGDDCIAIKSGRNNEGRNIGVPTENV 335
Query: 289 IIRRLICISPDSAAIALGSEMSGGIKDVRAED--ITAINTQSGVRIKTAVGRGAYVKEIY 346
II R I +GSE+SGG+ D+ A D + +R KT RG ++ IY
Sbjct: 336 II-RYNEFKDGHGGITIGSEISGGVNDIFAHDNYFDSKELDYPIRFKTNAERGGKLENIY 394
Query: 347 VRRMTMKTMKYV------FWMTGDYGSH 368
V+ T+ K F+ G G H
Sbjct: 395 VKNSTVNKSKIAVIHADFFYEEGTNGDH 422
>gi|380693882|ref|ZP_09858741.1| hypothetical protein BfaeM_07848 [Bacteroides faecis MAJ27]
Length = 454
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 190/418 (45%), Gaps = 47/418 (11%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+TDFG V G+ +NT+A AI +K GG +++VP G WLTG + S+ L + +
Sbjct: 46 ITDFGAVPGGEVNNTQAIAAAIDACNK---AGGGRVVVPAGTWLTGPVHFKSNVNLCLEE 102
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+A+L + + ++ LP + + G + +S L++ +V ++G T+ +
Sbjct: 103 NAVLSFTDNPEDY--LPAVMTSWEGLE--CYNYSPLLYAFECENVAISG-KGTLQPKMGT 157
Query: 179 W--WIK------------YRKKQFNV-------------TRPYLIEVMFSDNVQISNLTL 211
W W K Y K NV RP+LI NV + +
Sbjct: 158 WKVWFKRPAPHLEALKDLYTKASTNVPVIERQMAVGENHLRPHLIHFNRCKNVMLDGFKI 217
Query: 212 IDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVK 271
+SP W +H +++ L +RA N DGI+ + N +ED GDD V +K
Sbjct: 218 RESPFWTIHLYMCDGGMVRNLDVRA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVIK 275
Query: 272 SGWDEYGIKVGMPTQHLIIRRLIC-ISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGV 330
+G ++ ++ P ++++IR C I + +GSE+SGGI+++ D TA N+ +
Sbjct: 276 AGRNQDAWRLNTPCENIVIRN--CRILKGHTLLGIGSEISGGIRNIYMHDCTAPNSVMRL 333
Query: 331 -RIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPD---PGFDPKALPTVTGINY 386
+KT RG +++ IY++ + T + V + + P ++ K + + GI
Sbjct: 334 FFVKTNHRRGGFIENIYMKNVEAGTAQRVLEIDTEVLYQWKDLVPTYE-KRITRIDGIYM 392
Query: 387 RDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQ 444
+ ++ +L G P + I NV + +K + N N+ + ++T Q
Sbjct: 393 DKVNCESADAVYELKGNAELPVKNVQIKNVKVGSVKKFVKKVSNVENV--VEKKITYQ 448
>gi|359482692|ref|XP_002266797.2| PREDICTED: probable polygalacturonase At3g15720-like [Vitis
vinifera]
Length = 389
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 146/322 (45%), Gaps = 50/322 (15%)
Query: 49 ALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNL 108
ALN R + + DFG +GDG T +++AF A W
Sbjct: 10 ALNGRTTTFNVLDFGAIGDGVTDDSQAFLKA---------------------WNAVCTAR 48
Query: 109 TSHFTLYIHKDALLLASQDESEWPLLPPLP--------SYGRGRDEPGGRFSSLIFGTNL 160
T+ L I + L S P PP + + R G LIF
Sbjct: 49 TTSAMLIIQRKKTFLLSPTVFSGPCKPPQIHVLVLGDITAPKTRSAWGRSSYWLIF--QY 106
Query: 161 TDVVVTGGNATINGQGEPWW--IKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWN 218
D + G T++GQG WW + Y+++ N T Y + F +N+QI L +I+SPS +
Sbjct: 107 IDGFIINGKGTLDGQGSSWWPSLYYKQELLNDTNSYALGFSFCNNLQIYGLNVINSPSKH 166
Query: 219 VHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYG 278
V + ++ L I+AP +SPNTDGI C+ ++ DN I +GDDCVA+ G
Sbjct: 167 VKLFRCNGAILSNLNIKAPKESPNTDGIVIGECSQIQVHDNNIGTGDDCVAILKG----- 221
Query: 279 IKVGMPTQHLIIRRLICISPDSAAIALGS-EMSGG---IKDVRAEDITAINTQSGVRIKT 334
+ ++ I R+ C I++GS M+G ++++ +D + TQ+G+RIKT
Sbjct: 222 ------SSNINISRVAC--GPGHGISIGSLGMNGAYDTVEEIHVQDCSFTGTQNGIRIKT 273
Query: 335 AVGRGAYVKEIYVRRMTMKTMK 356
G Y ++I + +T+ +
Sbjct: 274 WQGGSGYARKISFQGITLNAAE 295
>gi|212690918|ref|ZP_03299046.1| hypothetical protein BACDOR_00406 [Bacteroides dorei DSM 17855]
gi|212666150|gb|EEB26722.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 462
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 184/392 (46%), Gaps = 45/392 (11%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ D+G V G+T NT+A AI+ +K GG ++++P G+WLTG + S+ L++ +
Sbjct: 54 IVDYGAVKGGETVNTEAIAKAIAACNKA---GGGRVVIPEGEWLTGPIHFQSNVNLHLEE 110
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+A+L + + S++ LP + + G + +S L++ + ++ +T G T+ +
Sbjct: 111 NAILRFTDNPSDY--LPAVMTSWEGME--CYNYSPLLYAMDCENIAIT-GKGTLAPIMDT 165
Query: 179 WWIKYRK---------------------------KQFNVTRPYLIEVMFSDNVQISNLTL 211
W I +++ K N RP+LI NV + +
Sbjct: 166 WKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEFKI 225
Query: 212 IDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVK 271
SP W +H +++ L ++A N DGI+ + N IE+ GDD V +K
Sbjct: 226 RQSPFWTIHLYMCDGGIVRNLDVKA--HGHNNDGIDLEMSCNFLIENCVFDQGDDAVVIK 283
Query: 272 SGWDEYGIKVGMPTQHLIIRRLIC-ISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGV 330
+G ++ ++ P ++++IR C I + +GSEMSGG+++V + TA ++ +
Sbjct: 284 AGRNQDAWRLNTPCENIVIRH--CDILKGHTLLGIGSEMSGGVRNVYMHNCTAPDSVFRL 341
Query: 331 RI-KTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGIN--YR 387
KT RG +++ I+++ + M+ V + D + P ++T IN Y
Sbjct: 342 FFAKTNHRRGGFIENIWMKNVKAGKMQRVLEVDTDV-LYQWRDLVPTYQDSITFINGLYM 400
Query: 388 DMVADNVTQSA-KLDGIRNDPFTGICISNVTI 418
D V + T++ L G P + I NVT+
Sbjct: 401 DSVTCDRTEAVYDLKGDARLPIKNVEIRNVTV 432
>gi|237712598|ref|ZP_04543079.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|423229037|ref|ZP_17215442.1| hypothetical protein HMPREF1063_01262 [Bacteroides dorei
CL02T00C15]
gi|423244877|ref|ZP_17225951.1| hypothetical protein HMPREF1064_02157 [Bacteroides dorei
CL02T12C06]
gi|229453919|gb|EEO59640.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|392634790|gb|EIY28702.1| hypothetical protein HMPREF1063_01262 [Bacteroides dorei
CL02T00C15]
gi|392640918|gb|EIY34709.1| hypothetical protein HMPREF1064_02157 [Bacteroides dorei
CL02T12C06]
Length = 462
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 184/392 (46%), Gaps = 45/392 (11%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ D+G V G+T NT+A AI+ +K GG ++++P G+WLTG + S+ L++ +
Sbjct: 54 IVDYGAVKGGETVNTEAIAKAIAACNKA---GGGRVVIPEGEWLTGPIHFQSNVNLHLEE 110
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+A+L + + S++ LP + + G + +S L++ + ++ +T G T+ +
Sbjct: 111 NAILRFTDNPSDY--LPAVMTSWEGME--CYNYSPLLYAMDCENIAIT-GKGTLAPIMDT 165
Query: 179 WWIKYRK---------------------------KQFNVTRPYLIEVMFSDNVQISNLTL 211
W I +++ K N RP+LI NV + +
Sbjct: 166 WKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEFKI 225
Query: 212 IDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVK 271
SP W +H +++ L ++A N DGI+ + N IE+ GDD V +K
Sbjct: 226 RQSPFWTIHLYMCDGGIVRNLDVKA--HGHNNDGIDLEMSCNFLIENCVFDQGDDAVVIK 283
Query: 272 SGWDEYGIKVGMPTQHLIIRRLIC-ISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGV 330
+G ++ ++ P ++++IR C I + +GSEMSGG+++V + TA ++ +
Sbjct: 284 AGRNQDAWRLNTPCENIVIRH--CDILKGHTLLGIGSEMSGGVRNVYMHNCTAPDSVFRL 341
Query: 331 RI-KTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGIN--YR 387
KT RG +++ I+++ + M+ V + D + P ++T IN Y
Sbjct: 342 FFAKTNHRRGGFIENIWMKNVKAGKMQRVLEVDTDV-LYQWRDLVPTYQDSITFINGLYM 400
Query: 388 DMVADNVTQSA-KLDGIRNDPFTGICISNVTI 418
D V + T++ L G P + I NVT+
Sbjct: 401 DSVTCDRTEAVYDLKGDARLPIKNVEIRNVTV 432
>gi|265752277|ref|ZP_06088070.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|263237069|gb|EEZ22539.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
Length = 462
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 184/392 (46%), Gaps = 45/392 (11%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ D+G V G+T NT+A AI+ +K GG ++++P G+WLTG + S+ L++ +
Sbjct: 54 IVDYGAVKGGETVNTEAIAKAIAACNKA---GGGRVVIPEGEWLTGPVHFQSNVNLHLEE 110
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+A+L + + S++ LP + + G + +S L++ + ++ +T G T+ +
Sbjct: 111 NAILRFTDNPSDY--LPAVMTSWEGME--CYNYSPLLYAMDCENIAIT-GKGTLAPIMDT 165
Query: 179 WWIKYRK---------------------------KQFNVTRPYLIEVMFSDNVQISNLTL 211
W I +++ K N RP+LI NV + +
Sbjct: 166 WKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEFKI 225
Query: 212 IDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVK 271
SP W +H +++ L ++A N DGI+ + N IE+ GDD V +K
Sbjct: 226 RQSPFWTIHLYMCDGGIVRNLDVKA--HGHNNDGIDLEMSCNFLIENCVFDQGDDAVVIK 283
Query: 272 SGWDEYGIKVGMPTQHLIIRRLIC-ISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGV 330
+G ++ ++ P ++++IR C I + +GSEMSGG+++V + TA ++ +
Sbjct: 284 AGRNQDAWRLNTPCENIVIRH--CDILKGHTLLGIGSEMSGGVRNVYMHNCTAPDSVFRL 341
Query: 331 RI-KTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGIN--YR 387
KT RG +++ I+++ + M+ V + D + P ++T IN Y
Sbjct: 342 FFAKTNHRRGGFIENIWMKNVKAGKMQRVLEVDTDV-LYQWRDLVPTYQDSITFINGLYM 400
Query: 388 DMVADNVTQSA-KLDGIRNDPFTGICISNVTI 418
D V + T++ L G P + I NVT+
Sbjct: 401 DSVTCDRTEAVYDLKGDARLPIKNVEIRNVTV 432
>gi|430837659|ref|ZP_19455621.1| glycosyl hydrolase [Enterococcus faecium E0680]
gi|430840340|ref|ZP_19458267.1| glycosyl hydrolase [Enterococcus faecium E0688]
gi|430859280|ref|ZP_19476893.1| glycosyl hydrolase [Enterococcus faecium E1552]
gi|430487173|gb|ELA63943.1| glycosyl hydrolase [Enterococcus faecium E0680]
gi|430489826|gb|ELA66401.1| glycosyl hydrolase [Enterococcus faecium E0688]
gi|430544024|gb|ELA84074.1| glycosyl hydrolase [Enterococcus faecium E1552]
Length = 436
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 151/320 (47%), Gaps = 35/320 (10%)
Query: 69 KTSNTKAFNTAISNLSKYAADGGAQ----LIVPPGKWLTGSFNLTSHFTLYIHKDALLLA 124
KT++T+ +T I L K A D GA+ + +P G +L G+ L L + A+L
Sbjct: 14 KTNDTQQDDTII--LQK-AIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKG 70
Query: 125 SQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYR 184
D +P + + G P + L + D+++ G I+GQG+ WW Y
Sbjct: 71 RTDIEAFPEIDTRVA-GVEMKWPAAILNVL----SAKDILIEG-KGIIDGQGDHWWELYW 124
Query: 185 KKQ-------------------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSS 225
K + + RP + +++V + +L S WN+ YS+
Sbjct: 125 GKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSN 184
Query: 226 NVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPT 285
+VL++ + IR D P+TDGI+ D TN R+ + + GDDC+A+KSG D G +V +
Sbjct: 185 DVLVEKVIIRNN-DGPSTDGIDIDYSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKS 243
Query: 286 QHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEI 345
+ + R C + +GSE+S G+ DV DI + G+R+K++ RG ++ I
Sbjct: 244 SRIEVAR--CKIRSGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENI 301
Query: 346 YVRRMTMKTMKYVFWMTGDY 365
V + M +++ F D+
Sbjct: 302 RVENLNMIDVQFPFSWIMDW 321
>gi|300789895|ref|YP_003770186.1| endopolygalacturonase [Amycolatopsis mediterranei U32]
gi|384153411|ref|YP_005536227.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
gi|399541775|ref|YP_006554437.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
gi|299799409|gb|ADJ49784.1| endopolygalacturonase [Amycolatopsis mediterranei U32]
gi|340531565|gb|AEK46770.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
gi|398322545|gb|AFO81492.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
Length = 457
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 172/386 (44%), Gaps = 42/386 (10%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPG-KWLTGSFNLTSHFTLYIH 117
+T +G DGKT NT A AI A GG +IVP G +LTG+ L S+ L++
Sbjct: 62 ITGYGAKNDGKTDNTAAIAKAIDAC---VAAGGGHVIVPGGGSFLTGAIRLKSNVDLHLE 118
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
++L S D +++P + R S +I+ ++ +TG + T++
Sbjct: 119 AGSVLKFSGDAAKFPNV-----LTRYEGIECVNHSPMIYAYQEKNIGLTG-SGTLDAAAT 172
Query: 178 PWWIKYRKKQF--------------------NVTRPYLIEVMFSDNVQISNLTLIDSPSW 217
W K + + + R +E +NV I +TL +S W
Sbjct: 173 SSWNKGSDRAYLETLVAKGTPPEKRVVPGSGHTMRSAFVEPYACENVLIQGITLKNSMFW 232
Query: 218 NVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEY 277
+HP NV + G++ NTDG +P+SC + I + + + DD +A+KSG D
Sbjct: 233 QLHPTLCRNVTVDGVSTDPSTAHSNTDGCDPESCDHVVIANCTLGAHDDNIAIKSGRDAD 292
Query: 278 GIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAI-NTQSGVRIKTAV 336
G +V +P Q+L++ + ++ + AI GSE +GGI++V A +T +T+ + +K+
Sbjct: 293 GRRVNVPCQNLVVVNCV-MNGNWGAITCGSEQTGGIRNVYAYKLTVKGDTKFALYVKSNT 351
Query: 337 GRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPD---PGFDPKALPTVTGINYRDMVADN 393
RG + + I + ++ + ++T Y S P F P + + D
Sbjct: 352 LRGGFSENINLDSVSGTFARNFVYVTSTYNSQTGSYVPSFGPFTISNCSSTKIAGKTFD- 410
Query: 394 VTQSAKLDGIRNDPFTGICISNVTIK 419
+ G+ N G ++N T K
Sbjct: 411 ------VSGLSNAHVHGFAVANSTFK 430
>gi|334342614|ref|YP_004555218.1| glycoside hydrolase [Sphingobium chlorophenolicum L-1]
gi|334103289|gb|AEG50712.1| glycoside hydrolase family 28 [Sphingobium chlorophenolicum L-1]
Length = 482
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 138/305 (45%), Gaps = 51/305 (16%)
Query: 90 GGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGG 149
GG ++IVP G W +G+ +L S+ L++ DA +L S ++P++ + R
Sbjct: 94 GGGRVIVPAGTWESGAIHLKSNVNLHVQADATILFSTRPQDYPIV-----FTRWEGMELM 148
Query: 150 RFSSLIFGTNLTDVVVTGGNATINGQGEP--WW--------------------------- 180
+S L++ +V +TG T++GQ P WW
Sbjct: 149 NYSPLVYAHGQENVALTGA-GTLDGQAGPDNWWSWKGPWNGTVEHGWKEGMADQRPARAR 207
Query: 181 --------IKYRKKQF---NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
+ K+ F + RP ++ D V I + L SP W VHPV NV++
Sbjct: 208 LFQMAEANVSPEKRIFGEGDYLRPAFVQFYACDRVLIEGVKLRRSPFWQVHPVLCRNVVV 267
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
+G+ I PN DG +P+S IE +GDDC+AV SG + G ++ P Q+++
Sbjct: 268 RGVDIHGL--GPNNDGCDPESVDMMLIEQCTFDTGDDCIAVNSGRNADGRRLAAPAQNIV 325
Query: 290 IRRLICISPDSAAIALGSEMSGGIKDVRAEDIT--AINTQSGVRIKTAVGRGAYVKEIYV 347
IR + + +GS++SGG + + AE T + + +R K RG ++ Y
Sbjct: 326 IRDCR-MKEGHGGVVVGSQISGGARHIYAERCTMDSPDLWYAIRFKNNALRGGLLEHFYF 384
Query: 348 RRMTM 352
R +T+
Sbjct: 385 RDLTV 389
>gi|294776431|ref|ZP_06741909.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294449757|gb|EFG18279.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 424
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 184/392 (46%), Gaps = 45/392 (11%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ D+G V G+T NT+A AI+ +K GG ++++P G+WLTG + S+ L++ +
Sbjct: 16 IVDYGAVKGGETVNTEAIAKAIAACNKA---GGGRVVIPEGEWLTGPVHFKSNVNLHLEE 72
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+A+L + + S++ LP + + G + +S L++ + ++ +T G T+ +
Sbjct: 73 NAILRFTDNPSDY--LPAVMTSWEGME--CYNYSPLLYAMDCENIAIT-GKGTLAPIMDT 127
Query: 179 WWIKYRK---------------------------KQFNVTRPYLIEVMFSDNVQISNLTL 211
W I +++ K N RP+LI NV + +
Sbjct: 128 WKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEFKI 187
Query: 212 IDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVK 271
SP W +H +++ L ++A N DGI+ + N IE+ GDD V +K
Sbjct: 188 RQSPFWTIHLYMCDGGIVRNLDVKA--HGHNNDGIDLEMSRNFLIENCVFDQGDDAVVIK 245
Query: 272 SGWDEYGIKVGMPTQHLIIRRLIC-ISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGV 330
+G ++ ++ P ++++IR C I + +GSEMSGG+++V + TA ++ +
Sbjct: 246 AGRNQNAWRLNTPCENIVIRH--CNILKGHTLLGIGSEMSGGVRNVYMHNCTAPDSVFRL 303
Query: 331 RI-KTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGIN--YR 387
KT RG +++ I+++ + M+ V + D + P ++T IN Y
Sbjct: 304 FFAKTNHRRGGFIENIWMKNVKAGKMQRVLEVDTDV-LYQWRDLVPTYQDSITFINGLYM 362
Query: 388 DMVADNVTQSA-KLDGIRNDPFTGICISNVTI 418
D V + T++ L G P + I NVT+
Sbjct: 363 DSVTCDRTEAVYDLKGDARLPIKNVEIRNVTV 394
>gi|47606004|sp|Q7M1E7.1|PGLR2_CHAOB RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Major
pollen allergen Cha o 2; AltName: Full=Pectinase;
AltName: Allergen=Cha o 2; Flags: Precursor
Length = 514
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 185/414 (44%), Gaps = 52/414 (12%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGS---FNLTSHFTLY 115
+ +G VGDGK +T+AF T + K A+ A L+VP K + F L
Sbjct: 61 VEQYGAVGDGKHDSTEAFATTWNAACKKAS---AVLLVPANKKFFVNNLVFRGPCQPHLS 117
Query: 116 IHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQ 175
D ++A D + W + + LTD + G I+GQ
Sbjct: 118 FKVDGTIVAQPDPARWKNSKIWLQFAQ-----------------LTDFNLM-GTGVIDGQ 159
Query: 176 GEPWW------IKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
G+ WW + R + RP I++ +S +V + LTL++SP +++ V I
Sbjct: 160 GQQWWAGQCKVVNGRTVCNDRNRPTAIKIDYSKSVTVKELTLMNSPEFHLVFGECEGVKI 219
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
QGL I+AP DSPNTDGI+ + IE I +GDDC+A+ +G + ++
Sbjct: 220 QGLKIKAPRDSPNTDGIDIFASKRFHIEKCVIGTGDDCIAIGTG-----------SSNIT 268
Query: 290 IRRLICISPDSAAI-ALGSEMS-GGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYV 347
I+ LIC +I +LG + S + V I+TQ+G+RIKT G I
Sbjct: 269 IKDLICGPGHGISIGSLGRDNSRAEVSHVHVNRAKFIDTQNGLRIKTWQGGSGLASYITY 328
Query: 348 RRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSA-KLDGIRND 406
+ M + + Y + + ++ + G+ Y+++ + T +A +L +
Sbjct: 329 ENVEMINSENPILINQFYCTSASACQNQRSAVQIQGVTYKNIHGTSATAAAIQLMCSDSV 388
Query: 407 PFTGICISNVTIKLTE-KPKELQWNCT--NIQGITS-RVTPQACELLPKKEPTD 456
P TGI +SNV++KLT KP +C N +G S R+ P L P P +
Sbjct: 389 PCTGIQLSNVSLKLTSGKPA----SCVDKNARGFYSGRLIPTCKNLRPGPSPKE 438
>gi|255691082|ref|ZP_05414757.1| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623432|gb|EEX46303.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 487
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 166/334 (49%), Gaps = 31/334 (9%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
FG D +T A AI + GG ++V PG + G+ + S L++ K
Sbjct: 58 FGLRNDTSVFSTPAIQAAIDACHQ---QGGGTVVVAPGYYKIGALFIKSGVNLHLSKGTT 114
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWI 181
LLAS + ++P P + G P S++I + + +TG I+ +G+ +W
Sbjct: 115 LLASDNIQDYPEFPSRIA-GIEMTWP----SAVINIMDAENAALTG-EGFIDCRGKVFWD 168
Query: 182 KY-------RKKQ------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
KY KK ++ R + V S ++ + + TL+ + W +YS +
Sbjct: 169 KYWAMREEYEKKNLRWIVDYDCKRVRGVLVSNSKHITLKDFTLVRTGFWACQILYSDHCS 228
Query: 229 IQGLTIRAPI--DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQ 286
+ GLTI + P+TDGI+ DS TN +E+ + DD + +K+G D G++V PT+
Sbjct: 229 VSGLTINNNVGGHGPSTDGIDIDSSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPTE 288
Query: 287 HLIIRRLICISPDSAA-IALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEI 345
++++R CI+ A + GSE SG I++V A D+ A T + +R+K+++ RG V+ I
Sbjct: 289 NVVVRN--CIARKGAGLLTCGSETSGSIRNVLAHDLIAYGTGTTLRLKSSMNRGGTVENI 346
Query: 346 YVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALP 379
Y+ R+ ++ ++ + ++ +P + ALP
Sbjct: 347 YMTRVEADSVTHILSVDLNW----NPKYSYSALP 376
>gi|423294934|ref|ZP_17273061.1| hypothetical protein HMPREF1070_01726 [Bacteroides ovatus
CL03T12C18]
gi|392674514|gb|EIY67960.1| hypothetical protein HMPREF1070_01726 [Bacteroides ovatus
CL03T12C18]
Length = 487
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 166/334 (49%), Gaps = 31/334 (9%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
FG D +T A AI + GG ++V PG + G+ + S L++ K
Sbjct: 58 FGLRNDTSVFSTPAIQAAIDACHQ---QGGGTVVVAPGYYKIGALFIKSGVNLHLSKGTT 114
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWI 181
LLAS + ++P P + G P S++I + + +TG I+ +G+ +W
Sbjct: 115 LLASDNIQDYPEFPSRIA-GIEMTWP----SAVINIMDAENAALTG-EGFIDCRGKVFWD 168
Query: 182 KY-------RKKQ------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
KY KK ++ R + V S ++ + + TL+ + W +YS +
Sbjct: 169 KYWAMREEYEKKNLRWIVDYDCKRVRGVLVSNSKHITLKDFTLVRTGFWACQILYSDHCS 228
Query: 229 IQGLTIRAPI--DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQ 286
+ GLTI + P+TDGI+ DS TN +E+ + DD + +K+G D G++V PT+
Sbjct: 229 VSGLTINNNVGGHGPSTDGIDIDSSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPTE 288
Query: 287 HLIIRRLICISPDSAA-IALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEI 345
++++R CI+ A + GSE SG I++V A D+ A T + +R+K+++ RG V+ I
Sbjct: 289 NVVVRN--CIARKGAGLLTCGSETSGSIRNVLAHDLIAYGTGTTLRLKSSMNRGGTVENI 346
Query: 346 YVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALP 379
Y+ R+ ++ ++ + ++ +P + ALP
Sbjct: 347 YMTRVEADSVTHILSVDLNW----NPKYSYSALP 376
>gi|150002759|ref|YP_001297503.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|149931183|gb|ABR37881.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
Length = 462
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 184/392 (46%), Gaps = 45/392 (11%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ D+G V G+T NT+A AI+ +K GG ++++P G+WLTG + S+ L++ +
Sbjct: 54 IVDYGAVKGGETVNTEAIAKAIAACNKA---GGGRVVIPEGEWLTGPVHFKSNVNLHLEE 110
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+A+L + + S++ LP + + G + +S L++ + ++ +T G T+ +
Sbjct: 111 NAILRFTDNPSDY--LPAVMTSWEGME--CYNYSPLLYAMDCENIAIT-GKGTLAPIMDT 165
Query: 179 WWIKYRK---------------------------KQFNVTRPYLIEVMFSDNVQISNLTL 211
W I +++ K N RP+LI NV + +
Sbjct: 166 WKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEFKI 225
Query: 212 IDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVK 271
SP W +H +++ L ++A N DGI+ + N IE+ GDD V +K
Sbjct: 226 RQSPFWTIHLYMCDGGIVRNLDVKA--HGHNNDGIDLEMSRNFLIENCVFDQGDDAVVIK 283
Query: 272 SGWDEYGIKVGMPTQHLIIRRLIC-ISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGV 330
+G ++ ++ P ++++IR C I + +GSEMSGG+++V + TA ++ +
Sbjct: 284 AGRNQDAWRLNTPCENIVIRH--CNILKGHTLLGIGSEMSGGVRNVYMHNCTAPDSVFRL 341
Query: 331 RI-KTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGIN--YR 387
KT RG +++ I+++ + M+ V + D + P ++T IN Y
Sbjct: 342 FFAKTNHRRGGFIENIWMKNVKAGKMQRVLEVDTDV-LYQWRDLVPTYQDSITFINGLYM 400
Query: 388 DMVADNVTQSA-KLDGIRNDPFTGICISNVTI 418
D V + T++ L G P + I NVT+
Sbjct: 401 DSVTCDRTEAVYDLKGDARLPIKNVEIRNVTV 432
>gi|160886983|ref|ZP_02067986.1| hypothetical protein BACOVA_04997 [Bacteroides ovatus ATCC 8483]
gi|423288919|ref|ZP_17267770.1| hypothetical protein HMPREF1069_02813 [Bacteroides ovatus
CL02T12C04]
gi|156107394|gb|EDO09139.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|392669009|gb|EIY62501.1| hypothetical protein HMPREF1069_02813 [Bacteroides ovatus
CL02T12C04]
Length = 487
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 166/334 (49%), Gaps = 31/334 (9%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
FG D +T A AI + GG ++V PG + G+ + S L++ K
Sbjct: 58 FGLRNDTSVFSTPAIQAAIDACHQ---QGGGTVVVAPGYYKIGALFIKSGVNLHLSKGTT 114
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWI 181
LLAS + ++P P + G P S++I + + +TG I+ +G+ +W
Sbjct: 115 LLASDNIQDYPEFPSRIA-GIEMTWP----SAVINIMDAENAALTG-EGFIDCRGKVFWD 168
Query: 182 KY-------RKKQ------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
KY KK ++ R + V S ++ + + TL+ + W +YS +
Sbjct: 169 KYWAMREEYEKKNLRWIVDYDCKRVRGVLVSNSKHITLKDFTLVRTGFWACQILYSDHCS 228
Query: 229 IQGLTIRAPI--DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQ 286
+ GLTI + P+TDGI+ DS TN +E+ + DD + +K+G D G++V PT+
Sbjct: 229 VSGLTINNNVGGHGPSTDGIDIDSSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPTE 288
Query: 287 HLIIRRLICISPDSAA-IALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEI 345
++++R CI+ A + GSE SG I++V A D+ A T + +R+K+++ RG V+ I
Sbjct: 289 NVVVRN--CIARKGAGLLTCGSETSGSIRNVLAHDLIAYGTGTTLRLKSSMNRGGTVENI 346
Query: 346 YVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALP 379
Y+ R+ ++ ++ + ++ +P + ALP
Sbjct: 347 YMTRVEADSVTHILSVDLNW----NPKYSYSALP 376
>gi|300726353|ref|ZP_07059805.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299776378|gb|EFI72936.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 464
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 155/338 (45%), Gaps = 47/338 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKW-LTGSFNLTSHFTLYIH 117
+ G +G + AFN AI S A G ++IVP G + L G L S+ + +
Sbjct: 55 ILKMGARNNGTYNCLPAFNKAIRRAS---AKKGVKIIVPKGTYYLCGPIVLRSNVCIDLQ 111
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRF----SSLIFGTNLTDVVVTGGNATIN 173
+ A+L + D +P++ G F S I+G + +V +TG TI+
Sbjct: 112 EGAVLKFAPDAKYYPMV---------NTSWEGTFLYNHSPFIYGYQVENVAITG-KGTID 161
Query: 174 GQGEPWWIKYRKKQFNVT------------------------RPYLIEVMFSDNVQISNL 209
G + +R KQ RP LI++ S N+ + +
Sbjct: 162 GNAMTTFATWRPKQKPAQLLSRQQNHEEVPIVQRKFGQGQWLRPQLIQLYQSKNITLEGV 221
Query: 210 TLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVA 269
+I+SP W +H + S N++ + L A + N DGI+P+ N IED + +GDD VA
Sbjct: 222 KIINSPFWCIHLLKSENIICRRLRYDAKL--VNNDGIDPEMSRNILIEDIHFNNGDDNVA 279
Query: 270 VKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDIT-AINTQS 328
+KSG D G P ++++IR C A+ +GSEMS G+++V E+ A +
Sbjct: 280 IKSGRDNDGWHDACPAENIVIRN--CHFKGLHAVVIGSEMSAGVRNVFVENCDYAGYCKR 337
Query: 329 GVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYG 366
GV IKT RG +V ++V ++ +F++T Y
Sbjct: 338 GVFIKTNPDRGGFVSHLFVNNCKFDEVEDLFYVTSRYA 375
>gi|319643181|ref|ZP_07997809.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520529|ref|ZP_08799916.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|423315312|ref|ZP_17293242.1| hypothetical protein HMPREF1058_03854 [Bacteroides vulgatus
CL09T03C04]
gi|423315336|ref|ZP_17293266.1| hypothetical protein HMPREF1058_03878 [Bacteroides vulgatus
CL09T03C04]
gi|254835049|gb|EET15358.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|317385085|gb|EFV66036.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392679549|gb|EIY72930.1| hypothetical protein HMPREF1058_03854 [Bacteroides vulgatus
CL09T03C04]
gi|392679573|gb|EIY72954.1| hypothetical protein HMPREF1058_03878 [Bacteroides vulgatus
CL09T03C04]
Length = 462
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 184/392 (46%), Gaps = 45/392 (11%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ D+G V G+T NT+A AI+ +K GG ++++P G+WLTG + S+ L++ +
Sbjct: 54 IVDYGAVKGGETVNTEAIAKAIAACNKA---GGGRVVIPEGEWLTGPVHFKSNVNLHLEE 110
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+A+L + + S++ LP + + G + +S L++ + ++ +T G T+ +
Sbjct: 111 NAILRFTDNPSDY--LPAVMTSWEGME--CYNYSPLLYAMDCENIAIT-GKGTLAPIMDT 165
Query: 179 WWIKYRK---------------------------KQFNVTRPYLIEVMFSDNVQISNLTL 211
W I +++ K N RP+LI NV + +
Sbjct: 166 WKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEFKI 225
Query: 212 IDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVK 271
SP W +H +++ L ++A N DGI+ + N IE+ GDD V +K
Sbjct: 226 RQSPFWTIHLYMCDGGIVRNLDVKA--HGHNNDGIDLEMSRNFLIENCVFDQGDDAVVIK 283
Query: 272 SGWDEYGIKVGMPTQHLIIRRLIC-ISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGV 330
+G ++ ++ P ++++IR C I + +GSEMSGG+++V + TA ++ +
Sbjct: 284 AGRNQDAWRLNTPCENIVIRH--CDILKGHTLLGIGSEMSGGVRNVYMHNCTAPDSVFRL 341
Query: 331 RI-KTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGIN--YR 387
KT RG +++ I+++ + M+ V + D + P ++T IN Y
Sbjct: 342 FFAKTNHRRGGFIENIWMKNVKAGKMQRVLEVDTDV-LYQWRDLVPTYQDSITFINGLYM 400
Query: 388 DMVADNVTQSA-KLDGIRNDPFTGICISNVTI 418
D V + T++ L G P + I NVT+
Sbjct: 401 DSVTCDRTEAVYDLKGDARLPIKNVEIRNVTV 432
>gi|298482124|ref|ZP_07000312.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271681|gb|EFI13254.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 487
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 166/334 (49%), Gaps = 31/334 (9%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
FG D +T A AI + GG ++V PG + G+ + S L++ K
Sbjct: 58 FGLRNDTSVFSTPAIQAAIDACHQ---QGGGTVVVAPGYYKIGALFIKSGVNLHLSKGTT 114
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWI 181
LLAS + ++P P + G P S++I + + +TG I+ +G+ +W
Sbjct: 115 LLASDNIQDYPEFPSRIA-GIEMTWP----SAVINIMDAENAALTG-EGFIDCRGKVFWD 168
Query: 182 KY-------RKKQ------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
KY KK ++ R + V S ++ + + TL+ + W +YS +
Sbjct: 169 KYWAMREEYEKKNLRWIVDYDCKRVRGVLVSNSKHITLKDFTLVRTGFWACQILYSDHCS 228
Query: 229 IQGLTIRAPI--DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQ 286
+ GLTI + P+TDGI+ DS TN +E+ + DD + +K+G D G++V PT+
Sbjct: 229 VSGLTINNNVGGHGPSTDGIDIDSSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPTE 288
Query: 287 HLIIRRLICISPDSAA-IALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEI 345
++++R CI+ A + GSE SG I++V A D+ A T + +R+K+++ RG V+ I
Sbjct: 289 NVVVRN--CIARKGAGLLTCGSETSGSIRNVLAHDLIAYGTGTTLRLKSSMNRGGTVENI 346
Query: 346 YVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALP 379
Y+ R+ ++ ++ + ++ +P + ALP
Sbjct: 347 YMTRVEADSVTHILSVDLNW----NPKYSYSALP 376
>gi|345512498|ref|ZP_08792024.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|229435434|gb|EEO45511.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
Length = 462
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 184/392 (46%), Gaps = 45/392 (11%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ D+G V G+T NT+A AI+ +K GG ++++P G+WLTG + S+ L++ +
Sbjct: 54 IVDYGAVKGGETVNTEAIAKAIAACNKA---GGGRVVIPEGEWLTGPVHFQSNVNLHLEE 110
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+A+L + + S++ LP + + G + +S L++ + ++ +T G T+ +
Sbjct: 111 NAILRFTDNPSDY--LPAVMTSWEGME--CYNYSPLLYAMDCENIAIT-GKGTLAPIMDT 165
Query: 179 WWIKYRK---------------------------KQFNVTRPYLIEVMFSDNVQISNLTL 211
W I +++ K N RP+LI NV + +
Sbjct: 166 WKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEFKI 225
Query: 212 IDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVK 271
SP W VH +++ L ++A N DGI+ + N IE+ GDD V +K
Sbjct: 226 RQSPFWTVHLYMCDGGIVRNLDVKA--HGHNNDGIDLEMSRNFLIENCVFDQGDDAVVIK 283
Query: 272 SGWDEYGIKVGMPTQHLIIRRLIC-ISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGV 330
+G ++ ++ P +++++R C I + +GSEMSGG+++V + TA ++ +
Sbjct: 284 AGRNQDAWRLNTPCENIVVRH--CNILKGHTLLGIGSEMSGGVRNVYMHNCTAPDSVFRL 341
Query: 331 RI-KTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGIN--YR 387
KT RG +++ I+++ + M+ V + D + P ++T IN Y
Sbjct: 342 FFAKTNHRRGGFIENIWMKNVKAGKMQRVLEVDTDV-LYQWRDLVPTYQDSITLINGLYM 400
Query: 388 DMVADNVTQSA-KLDGIRNDPFTGICISNVTI 418
D V + T++ L G P + I NVT+
Sbjct: 401 DSVTCDRTEAVYDLKGDARLPIKNVEIRNVTV 432
>gi|366053529|ref|ZP_09451251.1| polygalacturonase [Lactobacillus suebicus KCTC 3549]
Length = 439
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 156/348 (44%), Gaps = 52/348 (14%)
Query: 69 KTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDE 128
K T TAI+ + D G +LI+ G+ LTG NL S+ T+ DA++ +
Sbjct: 12 KVGPTDDIQTAINKI----GDSGGELIIAQGEHLTGPINLVSNLTVTFETDAVIKFKNN- 66
Query: 129 SEWPLLPPL--PSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYR-- 184
P L P + R L++ ++V+ G ++G G WW K+R
Sbjct: 67 ------PELYTPVWTRWEGIECYAMHPLMYANGKENIVIRG-KGVVDGSGSSWWDKFRNI 119
Query: 185 ----------KKQFNVT---------------------RPYLIEVMFSDNVQISNLTLID 213
K + ++ RP LI+ ++++S+ TL +
Sbjct: 120 EQEDRTLPREKYELDLAKLNPDYKTRTGGGGRPSTQFLRPPLIQFWKCHDIKLSDFTLEN 179
Query: 214 SPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSG 273
SP W +H VYS+ + I +T P ++ NTD ++ DS + +++ + GDD V +KSG
Sbjct: 180 SPFWTLHMVYSNKISIDNMTFSNPAEAINTDAMDIDSSEDVTVKNCLLDVGDDGVTLKSG 239
Query: 274 WDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIK 333
E GI+V PT+++ + ++ IA+GSE + GI DV + T T+ G+R+K
Sbjct: 240 SGEDGIRVNKPTKNVKVSDCRILA-SHGGIAIGSETAAGISDVEVSNCTFDGTRRGIRLK 298
Query: 334 TAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTV 381
+ RG ++ I + + M + W + PG P+ TV
Sbjct: 299 SRRTRGGTIENINLSGLKMD----LCWCPISLEQYFAPGVLPEEEATV 342
>gi|15237927|ref|NP_197222.1| polygalacturonase [Arabidopsis thaliana]
gi|10177065|dbj|BAB10507.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332005012|gb|AED92395.1| polygalacturonase [Arabidopsis thaliana]
Length = 421
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 141/298 (47%), Gaps = 39/298 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+T FG +GDGKT +TKAF A + K + +++VP GK ++ K
Sbjct: 41 VTSFGAIGDGKTDDTKAFLKAWEAVCKGGHN--RKILVPQGK-------------TFMLK 85
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+ S L G GR+++ I ++ +VVTGG TI+G+G
Sbjct: 86 PLTFIGPCKSSTISLSIRGNLVAPGYTWYAGRYTTWISFDSINGLVVTGG-GTIDGRGSL 144
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW RP + + ++ISNL ++SP +V S N+ ++GL + AP
Sbjct: 145 WWGNVNN------RPCAMHFNNCNGLRISNLRHLNSPRNHVGLSCSQNIEVRGLRMTAPG 198
Query: 239 DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISP 298
DSPNTDGI+ +C I D+ I +GDDC+A+ SG + H+ I + C
Sbjct: 199 DSPNTDGIDISNCIGVHIHDSVIATGDDCIAINSG-----------SSHINITGIFC--G 245
Query: 299 DSAAIALGSEMSGG----IKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
I++GS G +++VR ++ T TQ+GVRIKT Y ++I + M
Sbjct: 246 PGHGISVGSLGVTGDFETVEEVRVKNCTFTKTQNGVRIKTYQNGSGYARKISFEDINM 303
>gi|315570532|gb|ADU33270.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 394
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 172/382 (45%), Gaps = 21/382 (5%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+T +G G+ T A AI + + GG + P G++LTG L S+ + +
Sbjct: 21 VTRYGADRTGRVPCTDAIARAIKDAEIH---GGGLIHFPSGRYLTGPIELKSNMVMDVGT 77
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
++ D + +P L G+ R P F+ LI +V + G +G+GE
Sbjct: 78 GTIITFLDDPALYPPLDVTLPDGQRRSVP---FTPLIRAWGQKNVGIRGNKVIFDGRGEI 134
Query: 179 WWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI 238
WW + TRP + NV + T+ SP +NV+ ++SS ++I G+ IR P
Sbjct: 135 WWDRLPPP---ATRPIFVNFFDCHNVVLKGFTIKSSPMFNVNILHSSGIVIDGVRIRNPE 191
Query: 239 D----SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLI 294
PNTDGIN S I + +GDDCV V + W +K +PT+ ++I
Sbjct: 192 SYHGRGPNTDGINLVSVRKVHITGVDVATGDDCV-VFNAWGY--LKERVPTEDVLIENS- 247
Query: 295 CISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKT 354
+S AI++GS +GG++++ + T G+ IKT RG ++ I +TM
Sbjct: 248 YMSVGHGAISIGSVTAGGLRNITVRNCVIDGTTRGLDIKTNRQRGGTIENINYYNITMNR 307
Query: 355 MKYVFWMTGDYGSHPDPGFDP--KALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGIC 412
+++ D + DP + P P + I + ++ + G+ P I
Sbjct: 308 VRWEGIALIDLFNDNDPSWKPIGDQTPFIRNIRFDNIRGSCDRNPILVQGLPEAPIENIE 367
Query: 413 ISNVTIKLTEKPKELQWNCTNI 434
ISN I+ + +P L+ N NI
Sbjct: 368 ISNTDIR-SPQPIRLE-NSRNI 387
>gi|325970193|ref|YP_004246384.1| glycoside hydrolase family protein [Sphaerochaeta globus str.
Buddy]
gi|324025431|gb|ADY12190.1| glycoside hydrolase family 28 [Sphaerochaeta globus str. Buddy]
Length = 437
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 149/314 (47%), Gaps = 29/314 (9%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
FG +GDG+T NT A AI AA A ++V G +L+G+ L L I K A
Sbjct: 29 FGAIGDGRTLNTLAIQAAIDE----AATQQAVVVVADGIYLSGALFLKQGMALEIRKGAT 84
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWI 181
LL S + +++P+ GR P G + G +L+DV V G T++G G P+W
Sbjct: 85 LLGSPNLADYPI-QQTRFEGRLCTWPVG----FLNGMHLSDVKVYG-EGTLDGNGFPFWE 138
Query: 182 KY---RKKQF---------NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
++ R+ ++ RP L D + + LTL +S WN+H S N+ I
Sbjct: 139 QFWDARQAAIASNAAFSNRDIMRPRLCYFEDCDRIHLEGLTLQNSAFWNLHLYLSHNITI 198
Query: 230 QGLTIRAP---IDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQ 286
+ LTI+AP + + ++D I+ D+C+N I D + DDCV +K G ++ +PT+
Sbjct: 199 KALTIQAPHEGVRAASSDAIDIDACSNVTISDCTFSTDDDCVCIKGGKGPQAHRINLPTE 258
Query: 287 HLIIRRLIC-ISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEI 345
++++ R C I LGSE + + +V + S VR K + I
Sbjct: 259 NIVVER--CRFGFGHGVITLGSE-AALVSNVVVRNCVVEGENSLVRCKFRSDTYQRFENI 315
Query: 346 YVRRMTMKTMKYVF 359
+TM+ ++F
Sbjct: 316 LFEGITMQGGGWLF 329
>gi|430854301|ref|ZP_19472017.1| glycosyl hydrolase [Enterococcus faecium E1258]
gi|430539030|gb|ELA79293.1| glycosyl hydrolase [Enterococcus faecium E1258]
Length = 436
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 151/320 (47%), Gaps = 35/320 (10%)
Query: 69 KTSNTKAFNTAISNLSKYAADGGAQ----LIVPPGKWLTGSFNLTSHFTLYIHKDALLLA 124
KT++T+ +T I L K A D GA+ + +P G +L G+ L L + A+L
Sbjct: 14 KTNDTQQDDTII--LQK-AIDQGAKEHLPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKG 70
Query: 125 SQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYR 184
D +P + + G P + L + D+++ G I+GQG+ WW Y
Sbjct: 71 RTDIEAFPEIDTRVA-GVEMKWPAAILNVL----SAKDILIEG-KRIIDGQGDHWWELYW 124
Query: 185 KKQ-------------------FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSS 225
K + + RP + +++V + +L S WN+ YS+
Sbjct: 125 GKDQKSGTRAEYDQKGLRWIADYAIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSN 184
Query: 226 NVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPT 285
+VL++ + I D P+TDGI+ DS TN R+ + + GDDC+A+KSG D G +V +
Sbjct: 185 DVLVEKVII-CNNDGPSTDGIDIDSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKS 243
Query: 286 QHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEI 345
+ + R C + +GSE+S G+ DV DI + G+R+K++ RG ++ I
Sbjct: 244 SRIEVAR--CKIRSGYGVTIGSEVSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENI 301
Query: 346 YVRRMTMKTMKYVFWMTGDY 365
V + M +++ F D+
Sbjct: 302 RVENLNMIDVQFPFSWIMDW 321
>gi|266624154|ref|ZP_06117089.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288864021|gb|EFC96319.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 509
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 156/346 (45%), Gaps = 52/346 (15%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDAL 121
+ VGDGKT NT AI + A + +P G +LTG+ L S LY+ + A+
Sbjct: 96 YHAVGDGKTLNTAVIQRAIDDCMDEEA-----VYLPKGVFLTGALRLHSDMELYLEEGAV 150
Query: 122 LLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLI-FGT-------NLTDVVVTGGNATIN 173
L + ++ LP + S G ++ +SS++ G+ N +VV+ G +
Sbjct: 151 LQGTDQVEDY--LPRIWSRFEGIEQEC--YSSVLNLGSLEHQGDYNCRNVVIRGKGTIAS 206
Query: 174 GQ----------------------GEPWWIKYRKKQFNV---TRPYLIEVMFSDNVQISN 208
G GE I+ +K + RP LI + N+ +S
Sbjct: 207 GGRSLAEKVIASETEHLKDYLLSLGEQ--IRECEKPETIPGRVRPRLINMSNCQNITMSG 264
Query: 209 LTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCV 268
L L D SWNVH +YS ++ T + N DG +PDS TN I +GDD +
Sbjct: 265 LKLKDGASWNVHMIYSDGIVTNNCTFYSE-GIWNGDGWDPDSSTNCTIFGCTFNTGDDSI 323
Query: 269 AVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQS 328
A+KSG + G ++ P++H IR C I +GSEMSGGI DV+ D +++
Sbjct: 324 AIKSGKNPEGNEISRPSEH--IRIFDCKCAMGRGITIGSEMSGGINDVQIWDCDISSSRH 381
Query: 329 GVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTG---DYGSHPDP 371
G+ IK RG YVK + VR +T + +F G D P P
Sbjct: 382 GIEIKGTKKRGGYVKNVKVR--DSRTARILFHSVGYNDDGAGAPKP 425
>gi|423239876|ref|ZP_17220991.1| hypothetical protein HMPREF1065_01614 [Bacteroides dorei
CL03T12C01]
gi|392644865|gb|EIY38599.1| hypothetical protein HMPREF1065_01614 [Bacteroides dorei
CL03T12C01]
Length = 462
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 183/392 (46%), Gaps = 45/392 (11%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ D+G V G+T NT+A AI +K GG ++++P G+WLTG + S+ L++ +
Sbjct: 54 IVDYGAVKGGETVNTEAIAKAIVACNKA---GGGRVVIPEGEWLTGPIHFQSNVNLHLEE 110
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+A+L + + S++ LP + + G + +S L++ + ++ +T G T+ +
Sbjct: 111 NAILRFTDNPSDY--LPAVMTSWEGME--CYNYSPLLYAMDCENIAIT-GKGTLAPIMDT 165
Query: 179 WWIKYRK---------------------------KQFNVTRPYLIEVMFSDNVQISNLTL 211
W I +++ K N RP+LI NV + +
Sbjct: 166 WKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEFKI 225
Query: 212 IDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVK 271
SP W +H +++ L ++A N DGI+ + N IE+ GDD V +K
Sbjct: 226 RQSPFWTIHLYMCDGGIVRNLDVKA--HGHNNDGIDLEMSRNFLIENCVFDQGDDAVVIK 283
Query: 272 SGWDEYGIKVGMPTQHLIIRRLIC-ISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGV 330
+G ++ ++ P ++++IR C I + +GSEMSGG+++V + TA ++ +
Sbjct: 284 AGRNQDAWRLNTPCENIVIRH--CDILKGHTLLGIGSEMSGGVRNVYMHNCTAPDSVFRL 341
Query: 331 RI-KTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGIN--YR 387
KT RG +++ I+++ + M+ V + D + P ++T IN Y
Sbjct: 342 FFAKTNHRRGGFIENIWMKNVKAGKMQRVLEVDTDV-LYQWRDLVPTYQDSITFINGLYM 400
Query: 388 DMVADNVTQSA-KLDGIRNDPFTGICISNVTI 418
D V + T++ L G P + I NVT+
Sbjct: 401 DSVTCDRTEAVYDLKGDARLPIKNVEIRNVTV 432
>gi|427387343|ref|ZP_18883399.1| hypothetical protein HMPREF9447_04432 [Bacteroides oleiciplenus YIT
12058]
gi|425725504|gb|EKU88375.1| hypothetical protein HMPREF9447_04432 [Bacteroides oleiciplenus YIT
12058]
Length = 923
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 172/399 (43%), Gaps = 48/399 (12%)
Query: 73 TKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWP 132
T N AI +++K GG ++VPPG+W +G L S+ L+I + A + S D ++
Sbjct: 69 TSIINQAIVDVNK---KGGGTVLVPPGRWKSGRIMLKSNVNLHIAEGAEIEFSGDIEDY- 124
Query: 133 LLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTR 192
LP + + G + G + I+ ++ VTG TI G ++ R V
Sbjct: 125 -LPAVFTRHEGIELFGA--GAFIYADGENNIAVTG-KGTITGPALDSEVRKRTNTAAVVE 180
Query: 193 ------------------------PYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228
P I + NV I +T+ S WNV P Y NV+
Sbjct: 181 IDVPATMPLNERLFDGMEGRDFQPPRTIAPINCTNVFIEGITMNRSALWNVVPTYCENVI 240
Query: 229 IQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHL 288
I+G+T+ + ++ P DGI+ +S N IE + + DDC +KSG E G+ +G PT ++
Sbjct: 241 IRGITVNS-LEIPRGDGIDIESSKNVLIEYCTLNTHDDCFTLKSGRGEEGVHIGRPTANV 299
Query: 289 IIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVR 348
+IR + + I GSE +G IK++ A D T +G+ KT RG + +
Sbjct: 300 VIRHSLATN-GPGGITCGSETAGNIKNIYAHDCVFKGTMTGILFKTRRPRGGGTENVLYE 358
Query: 349 RMTMKTMKYVF---------WMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAK 399
R+ M +K F W+ P + P V I+ RD + ++ +
Sbjct: 359 RIRMIDVKDAFKWELLGSKRWVGELADRMPLRAIN-SLTPVVRNIHVRDFIVESSDRMIT 417
Query: 400 LDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGIT 438
I P + I N T+ K++ +++G T
Sbjct: 418 AICIPEVPLRNVLIENGTVHC----KQIIPRLNDVEGFT 452
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 112/235 (47%), Gaps = 20/235 (8%)
Query: 50 LNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLT 109
+N +TD+G V D T+ I + K +GG +I+P G +L+GS
Sbjct: 531 INAFGKKYCITDYGVVNDSTIVQTEKIQAVIDSAEK---NGGGVVIIPKGTFLSGSLFFK 587
Query: 110 SHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGN 169
LY+ + A L S D S++ ++ R + F++L+ + D G
Sbjct: 588 PKTHLYLEEKATLKGSDDISDFAVVDT-----RMEGQSLKYFAALL-NADEVDGFTVSGK 641
Query: 170 ATINGQGEPWWIKY--RKK------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHP 221
TING G +W + R++ + RP L+ V S NVQIS + LI+SP W H
Sbjct: 642 GTINGNGMRYWKSFWLRREVNPKCTNMDELRPRLLYVSNSKNVQISGVRLINSPFWTTHF 701
Query: 222 VYSSNVLIQGLTIRAP---IDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSG 273
+ + L I +P + +P+TDG++ D CTN I++ YI DD +A+K G
Sbjct: 702 YKCEQLRLLNLHITSPTSPVHAPSTDGVDIDVCTNVLIKNCYISVDDDGIALKGG 756
>gi|423221752|ref|ZP_17208222.1| hypothetical protein HMPREF1062_00408 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392645616|gb|EIY39340.1| hypothetical protein HMPREF1062_00408 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 461
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 163/337 (48%), Gaps = 54/337 (16%)
Query: 58 VLTDFGGVGDGKTS-NTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYI 116
V+TD+ DGK S TKA N AI+ S GG ++I+P G + T L S+ L++
Sbjct: 51 VITDYY---DGKDSLYTKAINQAITECS---VQGGGKVIIPKGIYPTAPIRLKSNVNLHL 104
Query: 117 HKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG 176
A+L + D + L + + G D S LI+ ++ +T GN ++GQ
Sbjct: 105 ADSAVLKFTTD---YNLFDTVRTRLEGID--CYNISPLIYAYEEVNIAIT-GNGIMDGQA 158
Query: 177 EP--WW--------------------IKYRKKQFNV------------TRPYLIEVMFSD 202
+ W+ + Y K+ +V RP I +
Sbjct: 159 DRSNWFCDERIRGVVQKDGKHTNEKTLLYEMKEDSVPFDKRVFSGKSSIRPQFINLYKCK 218
Query: 203 NVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIV 262
N+ + T+ +P W +HP+ S NV I+ + +++ N DG +P+SC N IED
Sbjct: 219 NILLEGFTINRAPFWLIHPLLSENVTIRKVKMQS--HGYNNDGCDPESCNNVLIEDCDFD 276
Query: 263 SGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-AAIALGSEMSGGIKDVRAED- 320
+GDDC+A+KSG DE G +P++++I+R C D A +A+GSE++GG ++V E+
Sbjct: 277 TGDDCIAIKSGRDEDGRFWNIPSENIIVRN--CRMKDGHAGVAIGSEVTGGCRNVWVENC 334
Query: 321 -ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK 356
+ + +RIK+ RG V+ ++VR + + K
Sbjct: 335 RMDSPELDRIIRIKSNAIRGGEVENLFVRNIFVGECK 371
>gi|374376177|ref|ZP_09633835.1| Polygalacturonase [Niabella soli DSM 19437]
gi|373233017|gb|EHP52812.1| Polygalacturonase [Niabella soli DSM 19437]
Length = 437
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 176/402 (43%), Gaps = 67/402 (16%)
Query: 46 EFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGS 105
E ++ +K S + DFG + + T NT AI K GG +I+PPG +L G
Sbjct: 30 ELPHISGKKFS--IKDFGAIANNSTDNTGVIQQAIDAADKA---GGGTVIIPPGIYLCGP 84
Query: 106 FNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSS--LIFGTNLTDV 163
S I A+L L P+ Y PGG S I G+ L DV
Sbjct: 85 LQFKSSLNFRIDSGAVLR----------LLPMDRY------PGGTKSGTDFISGSKLHDV 128
Query: 164 VVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNV--HP 221
+TG + TI+GQG PWW Y+ K V RP +I + + + I +TL+++P +++
Sbjct: 129 AITG-SGTIDGQGAPWWPAYKDK--GVKRPRMIALQNCERLLIRGVTLMNAPMFHIAISG 185
Query: 222 VYSSNVLIQGLTIRAPI-DSPNTDGINPDSC----TNTRIEDNYIVSGDDCVAVKSGWDE 276
++NV + +T+RAP D P N D+C I+D I +GDD G
Sbjct: 186 KATNNVTVDKVTVRAPASDDPLNPSHNTDACDVSGNKILIKDCDISTGDDNFTCGGG--- 242
Query: 277 YGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAV 336
T ++ I+ C +++GS GG+ + ED + NT+ G+RIK+
Sbjct: 243 --------TSNVHIQN--CKYGYGHGLSIGSYTKGGVSNFLIEDCSFTNTECGIRIKSDR 292
Query: 337 GRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPD-------------PGFDPKALPTVTG 383
RG V+ + R + M+ + + G Y + G+ + L +T
Sbjct: 293 DRGGVVQNLTYRNIKMENVGMPILIYGAYMAKEKEFRNLQKITPEIAAGYAREPLTDLTP 352
Query: 384 INYRDMVADNVTQSAK-------LDGIRNDPFTGICISNVTI 418
+ Y+D+ +N+T + + + G+ P + I VTI
Sbjct: 353 V-YKDITFENITATTQNGKRAGLIWGLPEAPASNIVFKKVTI 393
>gi|372275542|ref|ZP_09511578.1| polygalacturonase [Pantoea sp. SL1_M5]
Length = 443
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 153/334 (45%), Gaps = 32/334 (9%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L DF V DG+T +T A+ + AA GG +L +P G++ +G NL S F L++
Sbjct: 5 LADFHPVADGETPDTAVLQRAMDQI---AAAGGGRLTLPAGRYRSGCLNLPSDFELHLEA 61
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A+L+ASQ +++ + L + + L++ ++ ++G I+G GE
Sbjct: 62 GAVLIASQRLADYQAVQALSCAEKSHN-------VLLYALGQRNITISG-TGRIDGDGEA 113
Query: 179 WWIKYRKKQF----NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTI 234
W+ R +Q RP +I + V ++ T++ +P W VH V +V I LTI
Sbjct: 114 WFAAERDEQGYRLPRADRPRIIVFEDCEQVTLTAFTIVQAPMWTVHLVSCRHVHIDHLTI 173
Query: 235 RAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLI 294
+ PNTD ++ DSC + ++Y+ + DD + +K+ ++ P + ++I +
Sbjct: 174 DNAMTMPNTDALDIDSCEAVFVSNSYLSAADDAICIKTTHKPAALR--RPARQIMITNCL 231
Query: 295 CISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKT 354
+ S A +G+E ++DV T ++ G+ I + G GA +RR+
Sbjct: 232 -LRSYSCAFKIGTETWDDVEDVTVTGCTIFDSNRGIGILSRDG-GA------MRRLLFSN 283
Query: 355 MKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRD 388
+ + H P KA P + RD
Sbjct: 284 LTFAC-------HHAPPCHWGKADPLHISVRRRD 310
>gi|390437171|ref|ZP_10225709.1| polygalacturonase [Pantoea agglomerans IG1]
Length = 443
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 153/334 (45%), Gaps = 32/334 (9%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L DF V DG+T +T A+ + AA GG +L +P G++ +G NL S F L++
Sbjct: 5 LADFHPVADGETPDTAVLQRAMDQI---AAAGGGRLTLPAGRYRSGCLNLPSDFELHLEA 61
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A+L+ASQ +++ + L + + L++ ++ ++G I+G GE
Sbjct: 62 GAVLIASQRLADYQAVQALSCAEKSHN-------VLLYALGQRNITISG-TGRIDGDGEA 113
Query: 179 WWIKYRKKQF----NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTI 234
W+ R +Q RP +I + V ++ T++ +P W VH V +V I LTI
Sbjct: 114 WFAAERDEQGYRLPRADRPRIIVFEDCEQVTLTAFTIVQAPMWTVHLVSCRHVHIDHLTI 173
Query: 235 RAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLI 294
+ PNTD ++ DSC + ++Y+ + DD + +K+ ++ P + ++I +
Sbjct: 174 DNAMTMPNTDALDIDSCEAVFVSNSYLSAADDAICIKTTHKPAALR--RPARQIMITNCL 231
Query: 295 CISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKT 354
+ S A +G+E ++DV T ++ G+ I + G GA +RR+
Sbjct: 232 -LRSYSCAFKIGTETWDDVEDVTVTGCTIFDSNRGIGILSRDG-GA------MRRLLFSN 283
Query: 355 MKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRD 388
+ + H P KA P + RD
Sbjct: 284 LTFAC-------HHAPPCHWGKADPLHISVRRRD 310
>gi|224536009|ref|ZP_03676548.1| hypothetical protein BACCELL_00873 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522376|gb|EEF91481.1| hypothetical protein BACCELL_00873 [Bacteroides cellulosilyticus
DSM 14838]
Length = 459
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 188/415 (45%), Gaps = 50/415 (12%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG V G NTK+ AI+ K GG ++++P G+WLTG +L S+ LY+ +
Sbjct: 53 VVDFGAVKGGIADNTKSITAAINACHK---AGGGRVVIPEGEWLTGPVHLKSNVNLYLSE 109
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGG---------- 168
+A+L + + S++ LP + + G + +S L++ +V +TG
Sbjct: 110 NAVLCFTDNPSDY--LPAVMTSWEGME--CYNYSPLVYAVGCENVAITGKGMLKPKMDTW 165
Query: 169 -------NATINGQGEPWW-----IKYRKKQF----NVTRPYLIEVMFSDNVQISNLTLI 212
A +N E + + K+Q N RP+LI NV + +
Sbjct: 166 KVWFARPEAHLNALKELYTMASTDVPVEKRQMAVGENNLRPHLIHFNRCRNVLLDGFKIR 225
Query: 213 DSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKS 272
+SP W +H + + L ++A N DGI+ + N +ED GDD V +K+
Sbjct: 226 ESPFWTIHIYMCDGGIARNLDVKA--HGHNNDGIDLEMTRNFLVEDCTFDQGDDAVVIKA 283
Query: 273 GWDEYGIKVGMPTQHLIIRRLIC-ISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVR 331
G + ++ +PT++++IR C I + +GSE+SGGI++V D QS R
Sbjct: 284 GRNRDAWRLNIPTENIVIRN--CNIVEGHTLLGIGSEISGGIRNVYMHDCKV--PQSVRR 339
Query: 332 ---IKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPD---PGFDPKALPTVTGIN 385
+KT RGA+V+ I++ + ++ V + D P ++ + + + GI
Sbjct: 340 LFFVKTNHRRGAFVENIHMENIRAGHVQRVLEIDTDVLYQWKDLVPTYEER-ITRIDGIY 398
Query: 386 YRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSR 440
+++V + +L G P + I +V + + ++ N + +T R
Sbjct: 399 MKNVVCTSADAIYELKGDTKLPARNVVIEDVHVN---EVRDFVKKIDNTENVTER 450
>gi|383114381|ref|ZP_09935145.1| hypothetical protein BSGG_1446 [Bacteroides sp. D2]
gi|313693911|gb|EFS30746.1| hypothetical protein BSGG_1446 [Bacteroides sp. D2]
Length = 460
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 171/379 (45%), Gaps = 56/379 (14%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+TD+G G+ NTKA AI ++ GG +++VP G WLTG + S+ L + +
Sbjct: 54 ITDYGAQPGGEADNTKAIAAAIEACNQ---AGGGRVVVPAGTWLTGPIHFKSNVNLCLEE 110
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
+A+L + + S++ LP + + G + +S L++ +V +TG T+ + +
Sbjct: 111 NAVLNFTDNPSDY--LPTVMTSWEGLE--CYNYSPLLYAFECENVAITG-KGTLQPKMDT 165
Query: 179 W--WIK------------YRKKQFNV-------------TRPYLIEVMFSDNVQISNLTL 211
W W K Y K N+ RP+LI NV + +
Sbjct: 166 WKVWFKRPQPHLEALKELYTKASTNIPVIERQMAIGENHLRPHLIHFNRCKNVLLDGFKI 225
Query: 212 IDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVK 271
+SP W +H L++ L ++A N DGI+ + N +ED GDD V +K
Sbjct: 226 RESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVIK 283
Query: 272 SGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGV- 330
+G ++ ++ P ++++IR I + +GSE+SGGI+++ D TA N+ +
Sbjct: 284 AGRNQDAWRLNTPCENIVIRNCQ-ILKGHTLLGIGSEISGGIRNIYMHDCTAPNSVMRLF 342
Query: 331 RIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMV 390
+KT RG +++ +Y++ + T + V + T ++D+V
Sbjct: 343 FVKTNHRRGGFIENVYMKNVKAGTAQRVL-----------------EIDTEVLYQWKDLV 385
Query: 391 ADNVTQSAKLDGIRNDPFT 409
+ ++DGI D T
Sbjct: 386 PTYEERITRIDGIYMDKVT 404
>gi|322437669|ref|YP_004219759.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321165562|gb|ADW71265.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 482
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 176/394 (44%), Gaps = 54/394 (13%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ D G GDG T +T A A L + + GG +++VP G++LTG+ + S+ L I +
Sbjct: 43 VRDLGATGDGSTKDTVAMQLA---LDRCSVLGGGEVLVPAGEYLTGALRIHSNTVLRIEE 99
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNA-------- 170
A L S D ++P GR G +S+ I + +V + G
Sbjct: 100 GASLNGSPDIGDYPFTQ---VRWEGRWIKG--YSAFISAQDGENVTIIGKGKIVASPAIK 154
Query: 171 --TINGQGEPWWIKYRKKQF----------NVTR------PYLIEVMFSDNVQISNLTLI 212
++ G P + Y + NV R P L+E NV + ++
Sbjct: 155 GRVVHADGSP--MVYTRPAAGTAPNPDGPTNVARRDIMRNPALMEFTHCRNVLVQDVFTQ 212
Query: 213 DSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKS 272
+ W+ HPVY NV + +T+ + DGI+ DSC I+ V+ DDC+++KS
Sbjct: 213 GNDMWSTHPVYCENVTFRNVTVHS-----GADGIDVDSCKGVVIDGCEFVTRDDCISLKS 267
Query: 273 GWDEYGIKVGMPTQHLIIRRLICISPDS--AAIALGSEMSGGIKDVRAEDITAINTQS-G 329
G G +G+ + + I C D+ A I +GSE SGGI++V E + ++
Sbjct: 268 GRGMEGNTIGVVCEDIHISN--CTFNDAVWACIGIGSETSGGIRNVHVEHCKCLGARTFA 325
Query: 330 VRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGS---HPDPGFDPKALPTVTGINY 386
+ IK+ GRGA++++IY+ + + + F S PDP +PT+ ++
Sbjct: 326 IYIKSRPGRGAFIEDIYMNDLEVSGAQQGFLRFNILNSGLQDPDPVPGDDGIPTIRNFHF 385
Query: 387 RDMVADNVTQSAKLDGIR---NDPFTGICISNVT 417
++ +V +DG P G ++NVT
Sbjct: 386 SNIRVKDV--PVLVDGASIHPRKPLEGFSLTNVT 417
>gi|308189023|ref|YP_003933154.1| polygalacturonase [Pantoea vagans C9-1]
gi|308059533|gb|ADO11705.1| Putative polygalacturonase precursor [Pantoea vagans C9-1]
Length = 444
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 154/334 (46%), Gaps = 32/334 (9%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
L DF V DG+T +T A+ + AA GG +L +P G++ +G NL S F L++
Sbjct: 6 LADFHPVADGETPDTAVLQRAMDQI---AAAGGGRLTLPAGRYRSGCLNLPSDFELHLEA 62
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEP 178
A+L+AS +++ + L + + L++ +++++G I+G+GE
Sbjct: 63 GAVLIASPRLADYQAVQALSCAEKSHN-------VLLYALGQRNIIISG-TGRIDGEGEA 114
Query: 179 WWIKYRKKQF----NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTI 234
W+ R +Q RP +I + V ++ T++ +P W VH V +V I LTI
Sbjct: 115 WFAAERDEQGYRLPRADRPRIIVFEDCEQVTLTAFTIVQAPMWTVHLVSCRHVHIDHLTI 174
Query: 235 RAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLI 294
+ PNTD ++ DSC + ++Y+ + DD + +K+ ++ P + ++I +
Sbjct: 175 DNAMTMPNTDALDIDSCEAVFVSNSYLSAADDAICIKTTHKPAALR--RPARQIMITNCL 232
Query: 295 CISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKT 354
S S A +G+E ++DV T ++ G+ I + G GA +RR+
Sbjct: 233 LRS-YSCAFKIGTETWDDVEDVTVTGCTIFDSNRGIGILSRDG-GA------MRRLLFSN 284
Query: 355 MKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRD 388
+ + H P KA P + RD
Sbjct: 285 LTFAC-------HHAPPCHWGKADPLHISVRRRD 311
>gi|150002789|ref|YP_001297533.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149931213|gb|ABR37911.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 494
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 199/433 (45%), Gaps = 46/433 (10%)
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDA 120
D+G D +T A AI + GG + V PG + G+ L S+ L++++
Sbjct: 59 DYGLKNDSTRLSTAALQKAIDECHR---SGGGTVEVAPGYYRIGAIYLKSNVNLHLNQGT 115
Query: 121 LLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW 180
L+AS++ L P + S G + + S + + G T++ +G+ +W
Sbjct: 116 TLIASENID---LYPEMRSRVAGIEMV---WPSAVINILDAENAAISGAGTLDCRGKIFW 169
Query: 181 IKY---------RKKQ----FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNV 227
KY RK + ++ R + + S ++ + + TL+ + W +YS
Sbjct: 170 DKYWTMRKDYEKRKLRWIVDYDCKRVRGMLISNSRHITLKDFTLMRTGFWGCQVLYSDQC 229
Query: 228 LIQGLTIRAPI--DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPT 285
+ GL I I P+TDGI+ DS TN IE+ + DD + +K+G D G++V PT
Sbjct: 230 TLNGLKINNNIGGHGPSTDGIDIDSSTNILIENCEVDCNDDNICLKAGRDADGLRVNRPT 289
Query: 286 QHLIIRRLICISPDSAA-IALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKE 344
+++I+R CI+ A I GSE SG I++V ++ A T S +R+K+A+ RG V+
Sbjct: 290 ENIIVRG--CIARKGAGLITCGSETSGCIRNVLGYNLQAYGTSSTLRLKSAMNRGGTVEN 347
Query: 345 IYVRRMTMKTMKYVFWMTGDYGSHPD-------PGFDPKALPTVTGINYRDMVADNVTQS 397
IY+ ++T +++V + D +P ++ K +P +++ M+ +
Sbjct: 348 IYMTQVTADHVRHV--LAADLNWNPSYSYSTLPAEYEGKEIPE----HWKVMLTPVTPKE 401
Query: 398 AKLDGIRNDPFTGICISNVTIKLTEKP--KELQWNCTNIQGITSRVTPQACELLPKKEPT 455
RN + + +NV I +T +EL +I GI ++V + +
Sbjct: 402 KGYPHFRNVWLSDVKATNVQIFITAAGWNEELPLQNFHISGIKAKVNKAGSIIFTE---- 457
Query: 456 DCFFPDDKLPIDD 468
D D +L ++D
Sbjct: 458 DFHLEDVRLQVED 470
>gi|383155085|gb|AFG59707.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 88/138 (63%), Gaps = 1/138 (0%)
Query: 257 EDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDV 316
ED Y+ +GDD +A+KSGWDEYGI P+ ++I+RR I IS + IA+GSEMSGGI+D+
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRR-ITISTPFSGIAIGSEMSGGIRDI 59
Query: 317 RAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPK 376
E+I+ ++ G+R+KT VGRG ++ I + + + +G+ G HPD ++P
Sbjct: 60 LVENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPM 119
Query: 377 ALPTVTGINYRDMVADNV 394
ALP V I ++V ++
Sbjct: 120 ALPVVGDIAVLNVVGSSI 137
>gi|423226292|ref|ZP_17212758.1| hypothetical protein HMPREF1062_04944 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392629720|gb|EIY23726.1| hypothetical protein HMPREF1062_04944 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 459
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 187/415 (45%), Gaps = 50/415 (12%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+ DFG V G NTK+ AI K GG ++++P G+WLTG +L S+ LY+ +
Sbjct: 53 VVDFGAVKGGIADNTKSIAAAIDACHK---AGGGRVVIPEGEWLTGPVHLKSNVNLYLSE 109
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGG---------- 168
+A+L + S++ LP + + G + +S L++ +V +TG
Sbjct: 110 NAVLCFTDHPSDY--LPAVMTSWEGME--CYNYSPLVYAIGCENVAITGKGMLKPKMDTW 165
Query: 169 -------NATINGQGEPWW-----IKYRKKQF----NVTRPYLIEVMFSDNVQISNLTLI 212
A +N E + + K+Q N RP+LI NV + +
Sbjct: 166 KVWFARPEAHLNALKELYTMASTDVPVEKRQMAVGENNLRPHLIHFNRCRNVLLDGFKIR 225
Query: 213 DSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKS 272
+SP W +H + + + L ++A N DGI+ + N +ED GDD V +K+
Sbjct: 226 ESPFWTIHIYMCNGGIARNLDVKA--HGHNNDGIDLEMTRNFLVEDCTFDQGDDAVVIKA 283
Query: 273 GWDEYGIKVGMPTQHLIIRRLIC-ISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVR 331
G + ++ +PT++++IR C I + +GSE+SGGI++V D QS R
Sbjct: 284 GRNRDAWRLNIPTENIVIRN--CNIVEGHTLLGIGSEISGGIRNVYMHDCKV--PQSVRR 339
Query: 332 ---IKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPD---PGFDPKALPTVTGIN 385
+KT RGA+V+ I++ + ++ V + D P ++ + + + GI
Sbjct: 340 LFFVKTNHRRGAFVENIHMENIRAGHVQRVLEIDTDVLYQWKDLVPTYEER-ITRIDGIY 398
Query: 386 YRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSR 440
+++V + +L G P + I +V + + ++ N + +T R
Sbjct: 399 MKNVVCTSADAIYELKGDAKLPVRNVVIEDVHVN---EVRDFVKKIDNTENVTER 450
>gi|345301605|ref|YP_004821553.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
gi|345095542|gb|AEN67177.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 447
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 169/375 (45%), Gaps = 51/375 (13%)
Query: 83 LSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEW-PLLPPLPSYG 141
+ + +++GG + +P G W++G L SH TL++ + L ++ + ++ P P++
Sbjct: 53 IDQCSSNGGGIVTLPAGTWVSGPLTLKSHVTLHLAAGSTLKSTGNPDDFVPAFISQPTHP 112
Query: 142 RGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE-PWWIKYRKKQFNVT--------- 191
R +LI +++ D+ +TG TI+GQG+ WW K + ++
Sbjct: 113 R---------EALIIASHVQDIAITG-PGTIDGQGQKSWWSKASDAREHLKHGDVSWFEK 162
Query: 192 ------------RPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPID 239
RP+LIE IS L +I+SP WN+ S N+ + +I P D
Sbjct: 163 NWKGIPPANGMPRPWLIEFDHVQGGNISQLHIINSPMWNLVLRNSENIDVSRSSIFNPPD 222
Query: 240 SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPD 299
SPNTDGI+ S N + + +GDD +A+KSG G P+ ++ I +
Sbjct: 223 SPNTDGIDVVSSKNISLRHLKLSTGDDDIAIKSGLASTG--KAPPSSNINIDDIDIYR-- 278
Query: 300 SAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVF 359
+++GSE + GI V +++ T +G+RIK+ RG + I +TM +
Sbjct: 279 GHGLSVGSETANGIGRVTMQNVRFNGTDNGLRIKSGRDRGNQIGPISADNITMNHVNVPL 338
Query: 360 WMTGDYGSHPDPGFDPKAL------------PTVTGINYRDMVADNVTQSAKLDGIRNDP 407
+T YG + G+ K+L P + + + + A N + + G+ P
Sbjct: 339 VITDSYGG--NGGYSSKSLTSIPTSAISSLTPFIHDVTIQHLTATNSGMAGIISGLPEAP 396
Query: 408 FTGICISNVTIKLTE 422
I + ++ I T
Sbjct: 397 LQNITLKDIHIDATH 411
>gi|212690878|ref|ZP_03299006.1| hypothetical protein BACDOR_00366 [Bacteroides dorei DSM 17855]
gi|265752316|ref|ZP_06088109.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345512460|ref|ZP_08791986.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423239837|ref|ZP_17220952.1| hypothetical protein HMPREF1065_01575 [Bacteroides dorei
CL03T12C01]
gi|212666560|gb|EEB27132.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229438029|gb|EEO48106.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|263237108|gb|EEZ22578.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|392645462|gb|EIY39189.1| hypothetical protein HMPREF1065_01575 [Bacteroides dorei
CL03T12C01]
Length = 494
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 198/433 (45%), Gaps = 46/433 (10%)
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDA 120
D+G D +T A AI + GG + V PG + G+ L S+ L++++
Sbjct: 59 DYGLKNDSTQLSTAALQKAIDECHR---SGGGTVEVAPGYYRIGAIYLKSNVNLHLNQGT 115
Query: 121 LLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW 180
L+AS+D L P + S G + + S + + G T++ +G+ +W
Sbjct: 116 TLIASEDID---LYPEMRSRVAGIEMV---WPSAVINILDAENAAISGAGTLDCRGKIFW 169
Query: 181 IKY---------RKKQ----FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNV 227
KY RK + ++ R + + S ++ + + TL+ + W +YS
Sbjct: 170 DKYWTMRKDYEKRKLRWIVDYDCKRVRGMLISNSRHITLKDFTLMRTGFWGCQVLYSDQC 229
Query: 228 LIQGLTIRAPI--DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPT 285
+ GL I + P+TDGI+ DS TN IE+ + DD + +K+G D G++V PT
Sbjct: 230 TLNGLKINNNVGGHGPSTDGIDIDSSTNILIENCEVDCNDDNICLKAGRDADGLRVNRPT 289
Query: 286 QHLIIRRLICISPDSAA-IALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKE 344
+++I+R CI+ A I GSE SG I++V ++ A T S +R+K+A+ RG V+
Sbjct: 290 ENIIVRG--CIARKGAGLITCGSETSGCIRNVLGYNLQAYGTSSTLRLKSAMNRGGTVEN 347
Query: 345 IYVRRMTMKTMKYVFWMTGDYGSHPD-------PGFDPKALPTVTGINYRDMVADNVTQS 397
IY+ ++T +++V + D +P ++ K +P +++ M+ +
Sbjct: 348 IYMTQVTADNVRHV--LAADLNWNPSYSYSTLPAEYEGKEIPE----HWKVMLTPVTPKE 401
Query: 398 AKLDGIRNDPFTGICISNVTIKLTEKP--KELQWNCTNIQGITSRVTPQACELLPKKEPT 455
RN + + +NV +T +EL +I GI ++V + +
Sbjct: 402 KGYPHFRNVWLSDVKATNVQTFITAAGWNEELPLQNFHISGIKAKVNKAGSIIFTE---- 457
Query: 456 DCFFPDDKLPIDD 468
D D +L ++D
Sbjct: 458 DFHLEDVRLQVED 470
>gi|237712634|ref|ZP_04543115.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|423228996|ref|ZP_17215401.1| hypothetical protein HMPREF1063_01221 [Bacteroides dorei
CL02T00C15]
gi|423244835|ref|ZP_17225909.1| hypothetical protein HMPREF1064_02115 [Bacteroides dorei
CL02T12C06]
gi|229453955|gb|EEO59676.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|392634749|gb|EIY28661.1| hypothetical protein HMPREF1063_01221 [Bacteroides dorei
CL02T00C15]
gi|392641222|gb|EIY35006.1| hypothetical protein HMPREF1064_02115 [Bacteroides dorei
CL02T12C06]
Length = 494
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 198/433 (45%), Gaps = 46/433 (10%)
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDA 120
D+G D +T A AI + GG + V PG + G+ L S+ L++++
Sbjct: 59 DYGLKNDSTQLSTAALQKAIDECHR---SGGGTVEVAPGYYRIGAIYLKSNVNLHLNQGT 115
Query: 121 LLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWW 180
L+AS+D L P + S G + + S + + G T++ +G+ +W
Sbjct: 116 TLIASEDID---LYPEMRSRVAGIEMV---WPSAVINILDAENAAISGAGTLDCRGKIFW 169
Query: 181 IKY---------RKKQ----FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNV 227
KY RK + ++ R + + S ++ + + TL+ + W +YS
Sbjct: 170 DKYWTMRKDYEKRKLRWIVDYDCKRVRGMLISNSRHITLKDFTLMRTGFWGCQVLYSDQC 229
Query: 228 LIQGLTIRAPI--DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPT 285
+ GL I + P+TDGI+ DS TN IE+ + DD + +K+G D G++V PT
Sbjct: 230 TLNGLKINNNVGGHGPSTDGIDIDSSTNILIENCEVDCNDDNICLKAGRDADGLRVNRPT 289
Query: 286 QHLIIRRLICISPDSAA-IALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKE 344
+++I+R CI+ A I GSE SG I++V ++ A T S +R+K+A+ RG V+
Sbjct: 290 ENIIVRG--CIARKGAGLITCGSETSGCIRNVLGYNLQAYGTSSTLRLKSAMNRGGTVEN 347
Query: 345 IYVRRMTMKTMKYVFWMTGDYGSHPD-------PGFDPKALPTVTGINYRDMVADNVTQS 397
IY+ ++T +++V + D +P ++ K +P +++ M+ +
Sbjct: 348 IYMTQVTADNVRHV--LAADLNWNPSYSYSTLPAEYEGKEIPE----HWKVMLTPVTPKE 401
Query: 398 AKLDGIRNDPFTGICISNVTIKLTEKP--KELQWNCTNIQGITSRVTPQACELLPKKEPT 455
RN + + +NV +T +EL +I GI ++V + +
Sbjct: 402 KGYPHFRNVWLSDVKATNVQTFITAAGWNEELPLQNFHISGIKAKVNKAGSIIFTE---- 457
Query: 456 DCFFPDDKLPIDD 468
D D +L ++D
Sbjct: 458 DFHLEDVRLQVED 470
>gi|317047820|ref|YP_004115468.1| glycoside hydrolase family protein [Pantoea sp. At-9b]
gi|316949437|gb|ADU68912.1| glycoside hydrolase family 28 [Pantoea sp. At-9b]
Length = 447
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 170/391 (43%), Gaps = 50/391 (12%)
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDA 120
DFGG GD T T+A AI + A GG + + PG WL+G L S+ TL I
Sbjct: 31 DFGGKGDDSTLATRAIQQAID---RCAQQGGGHVTLGPGVWLSGPIVLKSNVTLVIPDGV 87
Query: 121 LLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG-EPW 179
L A+ D +++ + ++ +P F I + V + GG TI+G G + W
Sbjct: 88 TLKATPDTAQF-----VDAFLGRPTQPNEAF---ILANGVRHVAIEGG-GTIDGNGAQAW 138
Query: 180 W-------------------IKYRKKQF--NVTRPYLIEVMFSDNVQISNLTLIDSPSWN 218
W KY+ + RP+L+E+ + +I N+ L +SP WN
Sbjct: 139 WPAAIALRNTVRSGHPEAFTAKYQGIPLANGMPRPWLVEMNNVTSSEIHNIRLTNSPMWN 198
Query: 219 VHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYG 278
+ S ++ I LT+ P +PNTDGI+ S ++ I+ I +GDD +A+KSG
Sbjct: 199 LVLRNSQHLKIDQLTVDNPSTAPNTDGIDIVSSSDILIKHADISTGDDHIAIKSGISA-- 256
Query: 279 IKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGR 338
G+ ++++ I+ + I+LGSE GI V + + ++G+R+K+ R
Sbjct: 257 -GSGVKSENIAIQD--SVMRQGHGISLGSETINGIGKVTVSHVRFVGAENGLRVKSGRDR 313
Query: 339 GAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKAL-----------PTVTGINYR 387
G + + V +TM + +T Y P ++GI
Sbjct: 314 GNKIGPLQVDHVTMTDVATPLLVTDSYSGQAGAAGHALIAPIAAAPVTPTTPVISGIEVN 373
Query: 388 DMVADNVTQSAKLDGIRNDPFTGICISNVTI 418
+ A + L G+ P T + + ++ I
Sbjct: 374 HLAATGAKYAMILSGLPEAPVTDVRLRHIAI 404
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,088,121,020
Number of Sequences: 23463169
Number of extensions: 361236005
Number of successful extensions: 805458
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2325
Number of HSP's successfully gapped in prelim test: 1539
Number of HSP's that attempted gapping in prelim test: 794936
Number of HSP's gapped (non-prelim): 5101
length of query: 481
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 335
effective length of database: 8,933,572,693
effective search space: 2992746852155
effective search space used: 2992746852155
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)