BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011615
(481 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A7PZL3|PGLR_VITVI Probable polygalacturonase OS=Vitis vinifera GN=GSVIVT00026920001
PE=1 SV=1
Length = 491
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/449 (67%), Positives = 364/449 (81%), Gaps = 3/449 (0%)
Query: 34 AECRPTKNSYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQ 93
ECR + +E+ A++CR HSA L DFGGVGDG+T NTKAF A+S LSKY ++GGAQ
Sbjct: 40 GECRKGRILEALEYSAISCRAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQ 99
Query: 94 LIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSS 153
L VP GKWLTGSF+LTSHFTL++H+DA+LLASQD S+WP++ PLPSYGRGRD GR++S
Sbjct: 100 LYVPAGKWLTGSFSLTSHFTLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTS 159
Query: 154 LIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLID 213
LIFGTNLTDV++TG N TI+GQG WW ++ + TRPYLIE+M+S ++QISNLTL++
Sbjct: 160 LIFGTNLTDVIITGDNGTIDGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLN 219
Query: 214 SPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSG 273
SPSWNVHPVYS N+LIQG+TI AP+ SPNTDGINPDSCTNTRIED YIVSGDDCVAVKSG
Sbjct: 220 SPSWNVHPVYSRNILIQGITILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 279
Query: 274 WDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIK 333
WDEYGI GMPT+ L+IRRL CISP SA IALGSEMSGGI+DVRAEDI AIN++SG+RIK
Sbjct: 280 WDEYGIAYGMPTKQLVIRRLTCISPYSAVIALGSEMSGGIQDVRAEDIVAINSESGIRIK 339
Query: 334 TAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADN 393
T +GRG YVK+IYVR MTMKTMK+ FWMTG+YGSH D +DPKA P + GINYRDMVA+N
Sbjct: 340 TGIGRGGYVKDIYVRGMTMKTMKWAFWMTGNYGSHADNHYDPKAFPVIQGINYRDMVAEN 399
Query: 394 VTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKE 453
V+ +A+L+GI +DPFTGICISNVTI L K K++ W CT+++GI+S VTP C LP +
Sbjct: 400 VSMAARLEGIPSDPFTGICISNVTIHLAAKAKKVPWTCTDVEGISSGVTPTPCSTLPDQG 459
Query: 454 PTD---CFFPDDKLPIDDVRLNTCSASIS 479
P C FP + LPID V L CS I+
Sbjct: 460 PEKTSLCNFPAESLPIDTVELQKCSYGIN 488
>sp|Q7M1E7|PGLR2_CHAOB Polygalacturonase OS=Chamaecyparis obtusa PE=1 SV=1
Length = 514
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 185/414 (44%), Gaps = 52/414 (12%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGS---FNLTSHFTLY 115
+ +G VGDGK +T+AF T + K A+ A L+VP K + F L
Sbjct: 61 VEQYGAVGDGKHDSTEAFATTWNAACKKAS---AVLLVPANKKFFVNNLVFRGPCQPHLS 117
Query: 116 IHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQ 175
D ++A D + W + + LTD + G I+GQ
Sbjct: 118 FKVDGTIVAQPDPARWKNSKIWLQFAQ-----------------LTDFNLM-GTGVIDGQ 159
Query: 176 GEPWW------IKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
G+ WW + R + RP I++ +S +V + LTL++SP +++ V I
Sbjct: 160 GQQWWAGQCKVVNGRTVCNDRNRPTAIKIDYSKSVTVKELTLMNSPEFHLVFGECEGVKI 219
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
QGL I+AP DSPNTDGI+ + IE I +GDDC+A+ +G + ++
Sbjct: 220 QGLKIKAPRDSPNTDGIDIFASKRFHIEKCVIGTGDDCIAIGTG-----------SSNIT 268
Query: 290 IRRLICISPDSAAI-ALGSEMS-GGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYV 347
I+ LIC +I +LG + S + V I+TQ+G+RIKT G I
Sbjct: 269 IKDLICGPGHGISIGSLGRDNSRAEVSHVHVNRAKFIDTQNGLRIKTWQGGSGLASYITY 328
Query: 348 RRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSA-KLDGIRND 406
+ M + + Y + + ++ + G+ Y+++ + T +A +L +
Sbjct: 329 ENVEMINSENPILINQFYCTSASACQNQRSAVQIQGVTYKNIHGTSATAAAIQLMCSDSV 388
Query: 407 PFTGICISNVTIKLTE-KPKELQWNCT--NIQGITS-RVTPQACELLPKKEPTD 456
P TGI +SNV++KLT KP +C N +G S R+ P L P P +
Sbjct: 389 PCTGIQLSNVSLKLTSGKPA----SCVDKNARGFYSGRLIPTCKNLRPGPSPKE 438
>sp|P43212|PGLR2_CRYJA Polygalacturonase OS=Cryptomeria japonica PE=1 SV=1
Length = 514
Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 175/386 (45%), Gaps = 52/386 (13%)
Query: 54 KHSAV----LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGS---F 106
+H A+ + +G VGDGK T+AF+TA K + A L+VP K + F
Sbjct: 52 RHDAINIFNVEKYGAVGDGKHDCTEAFSTAWQAACKKPS---AMLLVPGNKKFVVNNLFF 108
Query: 107 N--LTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVV 164
N HFT + D ++ A Q+ + W + +F+ L T +
Sbjct: 109 NGPCQPHFTFKV--DGIIAAYQNPASWK-----------NNRIWLQFAKLTGFTLM---- 151
Query: 165 VTGGNATINGQGEPW------WIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWN 218
G I+GQG+ W W+ R+ + RP I+ FS + I L L++SP ++
Sbjct: 152 ---GKGVIDGQGKQWWAGQCKWVNGREICNDRDRPTAIKFDFSTGLIIQGLKLMNSPEFH 208
Query: 219 VHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYG 278
+ V I G++I AP DSPNTDGI+ + N ++ N I +GDDCVA+ +G
Sbjct: 209 LVFGNCEGVKIIGISITAPRDSPNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTG----- 263
Query: 279 IKVGMPTQHLIIRRLICISPDSAAI-ALGSEMS-GGIKDVRAEDITAINTQSGVRIKTAV 336
+ +++I LIC +I +LG E S + V I+TQ+G+RIKT
Sbjct: 264 ------SSNIVIEDLICGPGHGISIGSLGRENSRAEVSYVHVNGAKFIDTQNGLRIKTWQ 317
Query: 337 GRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQ 396
G I + M + + Y + + ++ + + Y+++ + T
Sbjct: 318 GGSGMASHIIYENVEMINSENPILINQFYCTSASACQNQRSAVQIQDVTYKNIRGTSATA 377
Query: 397 SA-KLDGIRNDPFTGICISNVTIKLT 421
+A +L + P I +S++++KLT
Sbjct: 378 AAIQLKCSDSMPCKDIKLSDISLKLT 403
>sp|P27644|PGLR_RHIRD Polygalacturonase OS=Rhizobium radiobacter GN=pgl PE=2 SV=1
Length = 312
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 103/235 (43%), Gaps = 24/235 (10%)
Query: 184 RKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNT 243
R+K + ++ Q+ T+ ++ SW +HP ++ TI AP DSPNT
Sbjct: 13 RRKPVRARCARGLHLVSCHKTQLLGFTIRNAASWTIHPQGCEDLTAAASTIIAPHDSPNT 72
Query: 244 DGINPDSCTNTRIEDNYIVSGDDCVAVKSGW-------DEYGIKVGMPTQHLIIRRLICI 296
DG NP+SC N I GDDC+AVK+G D G+ +H +++
Sbjct: 73 DGFNPESCRNVMISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRGITVRHCLMQ----- 127
Query: 297 SPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKT-AVGRGAYVKEIYVRRMTMKTM 355
P + +GSEMSGG+ DV ED I T G+R+KT A G V I +RR+ + +
Sbjct: 128 -PGHGGLVIGSEMSGGVHDVTVEDCDMIGTDRGLRLKTGARSGGGMVGNITMRRVLLDGV 186
Query: 356 KYVFWMTGDYGSHPD----------PGFDPKALPTVTGINYRDMVADNVTQSAKL 400
+ Y D P P V GI D+ N+ +A +
Sbjct: 187 QTALSANAHYHCDADGHDDWVQSRNPAPVNDGTPFVDGITVEDVEIRNLAHAAGV 241
>sp|Q9LW07|PGLR3_ARATH Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana
GN=At3g15720 PE=1 SV=1
Length = 456
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 148/326 (45%), Gaps = 53/326 (16%)
Query: 42 SYTIEFQALNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKW 101
++++ F + ++ +T FG VGDG T +++AF A + DG Q +VP G
Sbjct: 9 NFSLFFLQIFTSSNALDVTQFGAVGDGVTDDSQAFLKAWEAVCSGTGDG--QFVVPAGMT 66
Query: 102 LT-------GSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSL 154
GS T F + K L+A PS G + G
Sbjct: 67 FMLQPLKFQGSCKSTPVFVQMLGK---LVA-------------PSKGNWK----GDKDQW 106
Query: 155 IFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDS 214
I T++ +V+ G + INGQG WW + +RP ++ +N+++S LT +DS
Sbjct: 107 ILFTDIEGLVIEG-DGEINGQGSSWW------EHKGSRPTALKFRSCNNLRLSGLTHLDS 159
Query: 215 PSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGW 274
P ++H + V I L I AP SPNTDGI+ + +N I+D I +GDDC+A+ SG
Sbjct: 160 PMAHIHISECNYVTISSLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSG- 218
Query: 275 DEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGG----IKDVRAEDITAINTQSGV 330
T ++ I + C I++GS G +++V ++ T +G
Sbjct: 219 ----------TSNIHISGIDC--GPGHGISIGSLGKDGETATVENVCVQNCNFRGTMNGA 266
Query: 331 RIKTAVGRGAYVKEIYVRRMTMKTMK 356
RIKT G Y + I +T+ ++
Sbjct: 267 RIKTWQGGSGYARMITFNGITLDNVE 292
>sp|Q9FY19|PGLR2_JUNAS Polygalacturonase OS=Juniperus ashei GN=JNA2 PE=1 SV=1
Length = 507
Score = 102 bits (253), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 175/416 (42%), Gaps = 62/416 (14%)
Query: 62 FGGVGDGKTSNTKAF----NTAISNLSKYAADGGAQLIVPPGKWLTGSFNLT------SH 111
+G VGDGK +T AF N A + LS A +VP K + NL H
Sbjct: 65 YGAVGDGKHDSTDAFEKTWNAACNKLS-------AVFLVPANKKFVVN-NLVFYGPCQPH 116
Query: 112 FTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNAT 171
F+ + D + A D ++W + R LTD + G
Sbjct: 117 FSFKV--DGTIAAYPDPAKWKNSKIWMHFAR-----------------LTDFNLMG-TGV 156
Query: 172 INGQGEPWW------IKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSS 225
I+GQG WW I R + RP I++ FS +V + LTL +SP +++
Sbjct: 157 IDGQGNRWWSDQCKTINGRTVCNDKGRPTAIKIDFSKSVTVKELTLTNSPEFHLVFGECD 216
Query: 226 NVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPT 285
V IQG+ I+AP DSPNTDGI+ + IE I +GDDCVAV +G +
Sbjct: 217 GVKIQGIKIKAPRDSPNTDGIDIFASKRFEIEKCTIGTGDDCVAVGTG-----------S 265
Query: 286 QHLIIRRLICISPDSAAIALGSEMSGGIKD----VRAEDITAINTQSGVRIKTAVGRGAY 341
++ I+ L C +++GS G + V + I+TQ+G+RIKT G
Sbjct: 266 SNITIKDLTC--GPGHGMSIGSLGKGNSRSEVSFVHLDGAKFIDTQNGLRIKTWQGGSGL 323
Query: 342 VKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSA-KL 400
I + M + + Y + + ++ + + ++++ + T +A +L
Sbjct: 324 ASHITYENVEMINAENPILINQFYCTSAAACKNQRSAVKIQDVTFKNIHGTSATTAAIQL 383
Query: 401 DGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLPKKEPTD 456
+ P + I +SNV +KLT N T+ + P L P + P +
Sbjct: 384 MCSDSVPCSNIKLSNVFLKLTSGKVATCVNKNANGYYTNPLNPSCKSLHPGRTPKE 439
>sp|Q02096|PGLR_PERAE Polygalacturonase OS=Persea americana PE=2 SV=1
Length = 462
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 174/387 (44%), Gaps = 43/387 (11%)
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGK-WLTG--SFNLTSHFTLYIH 117
DFG GDG T +TKAF A K A G+ LIVP K +L +F+ L +
Sbjct: 89 DFGARGDG-TDDTKAFEKAW----KDACSSGSVLIVPENKNYLLKQITFSGPCKSDLRVK 143
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
+ AS D+S+W G R I +++++ + GG T NG GE
Sbjct: 144 IRGTIEASSDQSDW--------VGHNRKR-------WIEFEDISNLTLEGG-GTSNGNGE 187
Query: 178 PWWIKYRKKQFNV---TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTI 234
WW K++ ++ + P + N+ +S+L++ DS ++ +V+ L +
Sbjct: 188 TWWDSSCKRKKSLPCKSAPTALTFRSCKNLIVSDLSIKDSQKMHLSFDKCQDVIASNLMV 247
Query: 235 RAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLI 294
AP SPNTDGI+ + ++ I +GDDC++++SG ++ +I +
Sbjct: 248 TAPEHSPNTDGIHITGTQRIHVMNSVIGTGDDCISIESG-----------SKMVIATNIT 296
Query: 295 CISPDSAAI-ALGSEMS-GGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
C +I +LG S + V + +T +G+RIKT G K I + + M
Sbjct: 297 CGPGHGISIGSLGDRNSEAHVSGVLVDGGNLFDTTNGLRIKTWQGGSGSAKNIKFQNIVM 356
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSA-KLDGIRNDPFTGI 411
+ + Y DP + ++ V+ + Y ++ + ++ A K D ++ P G
Sbjct: 357 HNVTNPIIIDQYYCDSKDPCPEQESAVKVSNVAYMNIRGTSASEVAVKFDCSKSSPCQGY 416
Query: 412 CISNVTIKLTEKPKELQWNCTNI-QGI 437
+ N+ + + KE +C+NI QG+
Sbjct: 417 IVGNINL-VGNGGKETTMSCSNIVQGL 442
>sp|Q8RY29|ADPG2_ARATH Polygalacturonase ADPG2 OS=Arabidopsis thaliana GN=ADPG2 PE=2 SV=2
Length = 433
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 165/371 (44%), Gaps = 41/371 (11%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGK-WLTGSFNLTS--HFTLY 115
++DFG GDGKT +T+AF A +++G L+VP G +L S LT + L
Sbjct: 70 VSDFGAKGDGKTDDTQAFVNAWKKAC--SSNGAVNLLVPKGNTYLLKSIQLTGPCNSILT 127
Query: 116 IHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGN-ATING 174
+ L ASQ S++ S I + ++ V GG+ ++G
Sbjct: 128 VQIFGTLSASQKRSDYK-----------------DISKWIMFDGVNNLSVDGGDTGVVDG 170
Query: 175 QGEPWW---IKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQG 231
GE WW K K + P + S ++ + NL + ++ + SNV +
Sbjct: 171 NGETWWQNSCKRNKAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQVSN 230
Query: 232 LTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIR 291
+ + AP DSPNTDGI+ + N R+ ++ I +GDDC++++SG +Q++ I
Sbjct: 231 VVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESG-----------SQNVQIN 279
Query: 292 RLICISPDSAAI-ALGSEMSGG-IKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRR 349
+ C +I +LG + S + V + T +GVRIKT G I +
Sbjct: 280 DITCGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNIIFQN 339
Query: 350 MTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSA-KLDGIRNDPF 408
+ M +K + DY + A+ V + YRD+ + +++A + +N P
Sbjct: 340 IQMDNVKNPIIIDQDYCDKSKCTTEKSAVQ-VKNVVYRDISGTSASENAITFNCSKNYPC 398
Query: 409 TGICISNVTIK 419
GI + V IK
Sbjct: 399 QGIVLDRVNIK 409
>sp|O23147|ADPG1_ARATH Polygalacturonase ADPG1 OS=Arabidopsis thaliana GN=ADPG1 PE=2 SV=1
Length = 431
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 161/368 (43%), Gaps = 35/368 (9%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+++FG GDGKT +T+AF A + +G +VP GK T +
Sbjct: 70 VSNFGAKGDGKTDDTQAFKKAWKKAC--STNGVTTFLVPKGK------------TYLLKS 115
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGN-ATINGQGE 177
+ + +L L + + R + + LI ++ ++ + GG+ ING G+
Sbjct: 116 TRFRGPCKSLRNFQILGTLSASTK-RSDYKDKNHWLIL-EDVNNLSIDGGSTGIINGNGK 173
Query: 178 PWW---IKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTI 234
WW K K + P + + N+ + NL + ++ + + V + + I
Sbjct: 174 TWWQNSCKIDKSKPCTKAPTALTLYNLKNLNVKNLRVKNAQQIQISIEKCNKVEVSNVEI 233
Query: 235 RAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLI 294
AP DSPNTDGI+ + N R+ ++ I +GDDC++++ G TQ+L I L
Sbjct: 234 TAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDG-----------TQNLQIFDLT 282
Query: 295 CISPDSAAI-ALGSEMSGG-IKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352
C +I +LG + S + + + + +GVRIKT G K I + + M
Sbjct: 283 CGPGHGISIGSLGDDNSKAYVSGINVDGAKFSESDNGVRIKTYQGGSGTAKNIKFQNIRM 342
Query: 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSA-KLDGIRNDPFTGI 411
+ +K + DY D D ++ V + Y+++ + T A L+ P GI
Sbjct: 343 ENVKNPIIIDQDY-CDKDKCEDQESAVQVKNVVYKNISGTSATDVAITLNCSEKYPCQGI 401
Query: 412 CISNVTIK 419
+ NV IK
Sbjct: 402 VLENVKIK 409
>sp|O22818|PGLR6_ARATH Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana
GN=At2g43860 PE=2 SV=1
Length = 405
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 177/391 (45%), Gaps = 44/391 (11%)
Query: 62 FGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSF----NLTSHFTLYIH 117
+G DG +TKAF A A+ +IVP G++L G+ N + I
Sbjct: 38 YGAKPDGSKDSTKAFLAAWD--VACASANPTTIIVPKGRFLVGNLVFHGNECKQAPISIR 95
Query: 118 KDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGE 177
++A +D + ++ + I+ ++TDV + GG ++ QG
Sbjct: 96 IAGSIVAPED---FRIIASSKHW--------------IWFEDVTDVSIYGG--ILDAQGT 136
Query: 178 PWWIKYRKKQFNV-TRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRA 236
W N T + S+N++IS LT I+S +++ S+NV I G+ + A
Sbjct: 137 SLWKCKNNGGHNCPTGAKSLVFSGSNNIKISGLTSINSQKFHIVIDNSNNVNIDGVKVSA 196
Query: 237 PIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICI 296
+SPNTDGI+ +S + I ++ I +GDDC+++ G + ++ I+ + C
Sbjct: 197 DENSPNTDGIHVESSHSVHITNSRIGTGDDCISIGPG-----------STNVFIQTIRCG 245
Query: 297 SPDSAAI-ALG-SEMSGGIKDVRAEDITAINTQSGVRIKT-AVGRGAYVKEIYVRRMTMK 353
+I +LG +E G+ +V ++ + T +GVRIKT ++ + I + + MK
Sbjct: 246 PGHGISIGSLGRAEEEQGVDNVTVSNVDFMGTNNGVRIKTWGKDSNSFARNIVFQHINMK 305
Query: 354 TMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAK-LDGIRNDPFTGIC 412
+K + Y H P ++ V+ + Y D+ + T+ A LD + P TGI
Sbjct: 306 MVKNPIIIDQHYCLH-KPCPKQESGVKVSNVRYEDIHGTSNTEVAVLLDCSKEKPCTGIV 364
Query: 413 ISNVTIKLTEKPKELQWNCTNIQGITSRVTP 443
+ +V + +P Q +C N G + V P
Sbjct: 365 MDDVNLVSVHRPA--QASCDNANGSANDVVP 393
>sp|P35338|PGLR2_MAIZE Exopolygalacturonase OS=Zea mays GN=PG9 PE=2 SV=1
Length = 410
Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 169/399 (42%), Gaps = 60/399 (15%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTS--HFTLYI 116
+T G G+GKT +TKA A + S G +++P G +L G N T + I
Sbjct: 43 ITKLGASGNGKTDSTKAVQEAWA--SACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTI 100
Query: 117 HKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG 176
D LLA+ D S++ E G L D +V G ++GQG
Sbjct: 101 QVDGNLLATTDLSQYK-------------EHGNWIEIL-----RVDNLVITGKGNLDGQG 142
Query: 177 EPWWIKYR--KKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTI 234
W K KK P + + F +N ++S +TL++S ++++ N+LI+ +T+
Sbjct: 143 PAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYQCKNMLIKDVTV 202
Query: 235 RAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLI 294
AP DSPNTDGI+ + I + I GDDC+++ G T + I +
Sbjct: 203 TAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPG-----------TSKVNITGVT 251
Query: 295 CISPDSAAIALGS----EMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAY--VKEIYVR 348
C P I++GS + + D+ +D T T GVRIK + V +I+
Sbjct: 252 C-GP-GHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASVLTVSKIHYE 309
Query: 349 RMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTG---INYRDMVADNVT------QSAK 399
+ M+ ++ D + P L T G + +D+ N+T ++
Sbjct: 310 NIKMEDSANPIFI--------DMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAIS 361
Query: 400 LDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGIT 438
L P TG + +V ++ + + CTN +G T
Sbjct: 362 LLCTAKVPCTGATMDDVNVEYSGTNNKTMAICTNAKGST 400
>sp|P26216|PGLR1_MAIZE Exopolygalacturonase OS=Zea mays GN=PG1 PE=1 SV=1
Length = 410
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 173/399 (43%), Gaps = 60/399 (15%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTS--HFTLYI 116
+T G G+GKT +TKA A + S G +++P G +L G N T + I
Sbjct: 43 ITKLGASGNGKTDSTKAVQEAWA--SACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTI 100
Query: 117 HKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG 176
D LLA+ D S++ +D G + ++ NL V G ++GQG
Sbjct: 101 QVDGNLLATTDLSQY------------KDH--GNWIEILRVDNL----VITGKGNLDGQG 142
Query: 177 EPWWIKYR--KKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTI 234
W K KK P + + F +N ++S +TL++S ++++ ++LI+ +T+
Sbjct: 143 PAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTV 202
Query: 235 RAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLI 294
AP DSPNTDGI+ + I + I GDDC+++ G T + I +
Sbjct: 203 TAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPG-----------TSKVNITGVT 251
Query: 295 CISPDSAAIALGS----EMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAY--VKEIYVR 348
C P I++GS + + D+ +D T T GVRIK + V +I+
Sbjct: 252 C-GP-GHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASVLTVSKIHYE 309
Query: 349 RMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTG---INYRDMVADNVT------QSAK 399
+ M+ ++ D + P L T G + +D+ N+T ++
Sbjct: 310 NIKMEDSANPIFI--------DMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVS 361
Query: 400 LDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGIT 438
L P TG+ + +V ++ + + CTN +G T
Sbjct: 362 LLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGST 400
>sp|P35339|PGLR3_MAIZE Exopolygalacturonase OS=Zea mays GN=PG2C PE=2 SV=1
Length = 410
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 172/398 (43%), Gaps = 62/398 (15%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTS--HFTLYI 116
+T G G+GKT +TKA A + S G +++P G +L G N T + I
Sbjct: 43 ITKLGASGNGKTDSTKAVQEAWA--SACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTI 100
Query: 117 HKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG 176
+ LLA+ D S++ +D G + ++ NL V G ++GQG
Sbjct: 101 QVNGNLLATTDLSQY------------KDH--GNWIEILRVDNL----VITGKGKLDGQG 142
Query: 177 EPWWIKYR--KKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTI 234
W K KK P + + F +N ++S +TL++S ++++ ++LI+ + +
Sbjct: 143 PAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNV 202
Query: 235 RAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLI 294
AP DSPNTDGI+ + I + I GDDC+++ G T + I +
Sbjct: 203 TAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGPG-----------TSKVNITGVT 251
Query: 295 CISPDSAAIALGS----EMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRM 350
C P I++GS + + D+ +D T T +GVRIK AY E +
Sbjct: 252 C-GP-GHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIK------AY--EDAASVL 301
Query: 351 TMKTMKYVFWMTGDYGSHP---DPGFDPKALPTVTG---INYRDMVADNVT------QSA 398
T + Y D G +P D + P L T G + +D+ N+T ++
Sbjct: 302 TASKIHYENIKMEDSG-YPIIIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV 360
Query: 399 KLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQG 436
L P TG+ + +V IK + + C N +G
Sbjct: 361 NLLCTAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKG 398
>sp|P49062|PGLR1_ARATH Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana GN=PGA3
PE=2 SV=1
Length = 422
Score = 85.9 bits (211), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 145/322 (45%), Gaps = 51/322 (15%)
Query: 59 LTDFGGVGDGKTSNTKAF-NTAISNLSKYAADGGAQLIVPPGKWLTGSFNLT----SHFT 113
+T FG VGDG T+ KAF NT I A L+VP G +L G S T
Sbjct: 54 ITKFGAVGDGSTNTFKAFLNTWIQVCDSPVP---ATLLVPKGTFLAGPVIFAGPCKSKVT 110
Query: 114 LYIHKDALLLASQDES-EWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATI 172
+ + + S + EW L + D +V G T
Sbjct: 111 VNVIGTIIATTSGYATPEWFLFERV------------------------DNLVLTGTGTF 146
Query: 173 NGQGEPWWIK---YRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229
+G+GE W +K Q N+ P ++ NV+I+ ++ +++ ++++ V + NV I
Sbjct: 147 HGKGEAVWKADGCGKKVQCNLP-PTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNI 205
Query: 230 QGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
Q + + AP +SPNTDGI+ + N I D+ I +GDDCV+V G + ++
Sbjct: 206 QNIKLTAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSVGRG-----------SNNVT 254
Query: 290 IRRLICISPDSAAI-ALGS-EMSGGIKDVRAEDITAINTQSGVRIKTAVGRG-AYVKEIY 346
+ R+IC ++ +LG + + + + T I T +G+RIKT G + +I
Sbjct: 255 VERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNCTMIETDNGLRIKTWGGSDPSKAVDIK 314
Query: 347 VRRMTMKTMKYVFWMTGDYGSH 368
+ M+++K + +YGS
Sbjct: 315 FENIIMQSVKNPIIIDQNYGSR 336
>sp|Q9SFB7|QRT2_ARATH Polygalacturonase QRT2 OS=Arabidopsis thaliana GN=QRT2 PE=1 SV=2
Length = 439
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 131/289 (45%), Gaps = 22/289 (7%)
Query: 155 IFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNV---TRPYLIEVMFSDNVQISNLTL 211
I N+ ++ V GG I+G G WW K K + P + + +N+++SN+ L
Sbjct: 153 IVFENVNNLRVEGG-GRIDGNGHIWWPKSCKINPQLPCLGAPTAVTFVECNNLRVSNIRL 211
Query: 212 IDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVK 271
++ ++ NV L + +P DSPNTDGI+ N I+D+ + +GDDC+++
Sbjct: 212 ENAQQMHLTFQDCKNVKALNLMVTSPADSPNTDGIHVSGTQNILIQDSIVRTGDDCISIV 271
Query: 272 SGWDEY---GIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGG-IKDVRAEDITAINTQ 327
SG + GI G P + I +LG + S + +V T I T
Sbjct: 272 SGSENVRATGITCG-PGHGISIG------------SLGEDNSEAYVSNVVVNKATLIGTT 318
Query: 328 SGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYR 387
+GVRIKT G K I + + MK + + DY + + K+ V+ + Y+
Sbjct: 319 NGVRIKTWQGGHGMAKNIIFQDIIMKNVTNPIIINQDYCDRVEACPEQKSAVQVSNVLYK 378
Query: 388 DMVADNVTQSA-KLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQ 435
++ + A K +N P GI + NV + + + +C+N++
Sbjct: 379 NIQGTSSRPIAVKFVCSKNIPCRGISMQNVKLVDQTQQDVSKASCSNVK 427
>sp|Q39786|PGLR_GOSHI Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1
Length = 407
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 178/417 (42%), Gaps = 62/417 (14%)
Query: 58 VLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTS--HFTLY 115
V+ FG DGKT +K F A A+ + +++P G +L NL +
Sbjct: 31 VVAKFGAKADGKTDLSKPFLDAWKEAC--ASVTPSTVVIPKGTYLLSKVNLEGPCKAPIE 88
Query: 116 IHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSL----IFGTNLTDVVVTGGNAT 171
I+ + A D S + +D RF S+ +FG + D
Sbjct: 89 INVQGTIQAPADPSAF------------KDPNWVRFYSVENFKMFGGGIFD--------- 127
Query: 172 INGQGEPWWIKYRK-----KQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSN 226
GQG I Y K ++F P I F N I ++T DS ++++ N
Sbjct: 128 --GQGS---IAYEKNTCENREFRSKLPVNIRFDFLTNALIQDITSKDSKLFHINVFACKN 182
Query: 227 VLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQ 286
+ ++ L I AP +SPNTDGI+ I + I +GDDC+++ G T+
Sbjct: 183 ITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDG-----------TK 231
Query: 287 HLIIRRLICISPDSAAIALGS----EMSGGIKDVRAEDITAINTQSGVRIKTAVGR-GAY 341
+++I+ + C I++GS + ++ ++ + T NT +G RIKT G G
Sbjct: 232 NMVIKEITC--GPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGA 289
Query: 342 VKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADN-VTQSAKL 400
V EI+ +TM + + Y + ++ ++ I+++++ + + ++ K
Sbjct: 290 VSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKF 349
Query: 401 DGIRNDPFTGICISNVTIKLT-EKPKELQWNCTNIQGITS-RVTPQACELLPKKEPT 455
+ P + ++++ IK +P Q C N++ ITS ++ P C K P+
Sbjct: 350 ICSGSSPCQNVELADIDIKHNGAEPATSQ--CLNVKPITSGKLNPIPCSGPVPKTPS 404
>sp|Q39766|PGLR_GOSBA Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1
Length = 407
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 136/324 (41%), Gaps = 57/324 (17%)
Query: 58 VLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTS--HFTLY 115
V+ FG DGKT +K F A A+ + +++P G +L NL +
Sbjct: 31 VVAKFGAKADGKTDLSKPFLDAWKEAC--ASVTPSTVVIPKGTYLLSKVNLEGPCKAPIE 88
Query: 116 IHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSL----IFGTNLTDVVVTGGNAT 171
I+ + A D S + +D RF S+ +FG + D
Sbjct: 89 INVQGTIQAPADPSAF------------KDPNWVRFYSVENFKMFGGGIFD--------- 127
Query: 172 INGQGEPWWIKYRK-----KQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSN 226
GQG I Y K ++F P I F N I ++T DS ++++ N
Sbjct: 128 --GQGS---IAYEKNTCENREFRSKLPVNIRFDFVTNALIQDITSKDSKLFHINVFACKN 182
Query: 227 VLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQ 286
+ ++ L I AP +SPNTDGI+ I + I +GDDC+++ G T+
Sbjct: 183 ITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDG-----------TK 231
Query: 287 HLIIRRLICISPDSAAIALGS----EMSGGIKDVRAEDITAINTQSGVRIKTAVGR-GAY 341
+++I+ + C I++GS + ++ ++ + T NT +G RIKT G G
Sbjct: 232 NMVIKEITC--GPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGA 289
Query: 342 VKEIYVRRMTMKTMKYVFWMTGDY 365
V EI+ +TM + + Y
Sbjct: 290 VSEIHFEDITMNNVSSPILIDQQY 313
>sp|P35337|PGLR_BRANA Polygalacturonase OS=Brassica napus PE=2 SV=1
Length = 397
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 139/315 (44%), Gaps = 48/315 (15%)
Query: 168 GNATINGQGEPWWIKYR-KKQFNVTR-PYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSS 225
G T +G+G W K F + P + F DN +I ++T +D+ +++ + +
Sbjct: 111 GGGTFDGEGNAAWKANNCHKTFECKKLPISVRFDFVDNAEIKDVTSLDAKNFHFNVISGK 170
Query: 226 NVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPT 285
N+ + I AP +SPNTDGI+ C +I + I +GDDC++V G
Sbjct: 171 NMTFDNIKIIAPAESPNTDGIHLGRCEGVKILNTKIATGDDCISVGDG-----------M 219
Query: 286 QHLIIRRLICISPDSAAIALGSEMSGG----IKDVRAEDITAINTQSGVRIK-------T 334
++L+I +++C P I++GS G + D+ ++ T T +G+RIK T
Sbjct: 220 KNLLIEKVVC-GP-GHGISVGSLGRYGWEQDVTDITVKNCTLEGTSNGLRIKTWPSAACT 277
Query: 335 AVGRGAYVKEIYVRRMT---MKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVA 391
G + ++I + +++ + +Y W + P + V I +R++
Sbjct: 278 TTAAGIHFEDIILNKVSNPILIDQEYCPWNQCNKNK-------PSTIKLVD-ITFRNIRG 329
Query: 392 DNVTQSA-KLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLP 450
+ + A KL + P + I ++ I+ T + CTN VTP+ L+
Sbjct: 330 TSENKDAVKLLCSKGHPCENVEIGDINIEYTGPDGPPTFECTN-------VTPK---LVG 379
Query: 451 KKEPTDCFFPDDKLP 465
+ P C P K P
Sbjct: 380 AQNPKACVGPVVKAP 394
>sp|Q94AJ5|PGLR5_ARATH Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana
GN=At1g80170 PE=1 SV=1
Length = 444
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 158/370 (42%), Gaps = 42/370 (11%)
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPG-KWLTGSFNLT----SHFTLY 115
+FG G+G T +TKAF A + ++ +++VP L +L+ + TL
Sbjct: 57 NFGAKGNGVTDDTKAFADAWK--TACSSKVKTRILVPENYTCLLRPIDLSGPCKARLTLQ 114
Query: 116 IHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQ 175
I ++A D W L R L F L+ + V GG T+NG
Sbjct: 115 I--SGTIIAPNDPDVWEGL--------------NRRKWLYF-HGLSRLTVEGG-GTVNGM 156
Query: 176 GEPWWIKYRKKQF-NVTR--PYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGL 232
G+ WW + K N R P + N+++ NL +IDS ++ V I GL
Sbjct: 157 GQEWWERSCKHNHSNPCRGAPTALTFHKCKNMRVENLNVIDSQQMHIALTSCRRVTISGL 216
Query: 233 TIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292
+ AP SPNTDGI+ I++ + +GDDC+++ V TQ + I
Sbjct: 217 KVIAPATSPNTDGIHISVSRGIVIDNTTVSTGDDCISI----------VKNSTQ-ISISN 265
Query: 293 LICISPDSAAI-ALGSEMS-GGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRM 350
+IC +I +LG S ++D+ + +T +GVRIKT G V +I R +
Sbjct: 266 IICGPGHGISIGSLGKSKSWEEVRDITVDTAIISDTANGVRIKTWQGGSGLVSKIIFRNI 325
Query: 351 TMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSA-KLDGIRNDPFT 409
M + + Y P + + ++ I++ + + ++ A K+ + P
Sbjct: 326 KMNNVSNPIIIDQYYCDSRKPCANQTSAISIENISFVHVRGTSASKEAIKISCSDSSPCR 385
Query: 410 GICISNVTIK 419
I + ++ ++
Sbjct: 386 NILLQDIDLE 395
>sp|P35336|PGLR_ACTDE Polygalacturonase OS=Actinidia deliciosa PE=2 SV=1
Length = 467
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 169/403 (41%), Gaps = 52/403 (12%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLT----SHFTL 114
+ DFG GDG+ +TKAF A + ++ A L+VP +L + + S T+
Sbjct: 92 VDDFGAKGDGR-DDTKAFEKAWK--AACSSTSSAVLLVPKKNYLVRPISFSGPCKSGLTM 148
Query: 115 YIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATING 174
I+ + AS D S++ GR L+F + + ++ V GG TING
Sbjct: 149 QIY--GTIEASDDRSDY--------------RKDGRHW-LVFDS-VQNLRVEGG-GTING 189
Query: 175 QGEPWW---IKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQG 231
G+ WW K K P + S +V + NL + ++ +V NV
Sbjct: 190 NGKIWWQNSCKTNKALPCKDAPTALTFYKSKHVIVKNLKIENAQQIHVSFDNCVNVQASN 249
Query: 232 LTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIR 291
L + AP +SPNTDGI+ N I I +GDDC+++ +G ++ + +
Sbjct: 250 LMVTAPENSPNTDGIHVTGTQNIHISSCVIGTGDDCISIVNG-----------SRKVRVN 298
Query: 292 RLICISPDSAAIALGSEMSGG----IKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYV 347
+ C P I++GS G + DV T +GVRIKT G I
Sbjct: 299 DITC-GP-GHGISIGSLGYGNSEAHVSDVVVNGAKLCGTTNGVRIKTWQGGSGSASNIKF 356
Query: 348 RRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDM---VADNVTQSAKLDGIR 404
+ + M ++ + +Y P + + V + Y+++ A NV + D +
Sbjct: 357 QNVEMHNVENPIIIDQNYCDQDKPCQEQSSAVQVKNVVYQNIKGTCASNV--AITFDCSK 414
Query: 405 NDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACE 447
P GI + +V +++ E + C N++ + V C+
Sbjct: 415 RFPCQGIVLEDVDLEI-EGGAAAKALCNNVELSETGVVSPHCQ 456
>sp|Q949Z1|PGLR4_ARATH Polygalacturonase At1g48100 OS=Arabidopsis thaliana GN=At1g48100
PE=2 SV=1
Length = 475
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 130/317 (41%), Gaps = 55/317 (17%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHF------ 112
+T FG VGDG +T AF A + A + G ++ P G G F +TS
Sbjct: 82 VTSFGAVGDGSCDDTAAFQDAWK--AACAVESGV-VLAPEG----GVFKITSTIFSGPCK 134
Query: 113 -TLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNAT 171
L D +L+ EWP E + L+F D G T
Sbjct: 135 PGLVFQLDGVLMPPDGPEEWP-------------EKDNKNQWLVF--YRLDGFTFSGKGT 179
Query: 172 INGQGEPWWIKYRKKQFN---------VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPV 222
+ G G+ WW K P +I S+N+++ L + +SP +++
Sbjct: 180 VEGNGQKWWDLPCKPHRGPDGSSSSGPCASPTMIRFFMSNNIEVKGLRIQNSPQFHMKFD 239
Query: 223 YSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVG 282
VLI + I +P SPNTDGI+ + + I ++ + +GDDC+++ +G +
Sbjct: 240 GCQGVLINEIQISSPKLSPNTDGIHLGNTRSVGIYNSVVSNGDDCISIGTGCSD------ 293
Query: 283 MPTQHLIIRRLICISPDSAAIALGS----EMSGGIKDVRAEDITAINTQSGVRIKTAVGR 338
+ I+ + C P S I++GS + ++ + ++ +G+R+KT G
Sbjct: 294 -----VDIQGVTC-GP-SHGISIGSLGVHNSQACVSNITVRNTVIRDSDNGLRVKTWQGG 346
Query: 339 GAYVKEIYVRRMTMKTM 355
V + + M+ +
Sbjct: 347 TGSVSNLLFENIQMENV 363
>sp|Q05967|PGLR_TOBAC Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1
Length = 396
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 158/382 (41%), Gaps = 30/382 (7%)
Query: 78 TAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPL 137
T + +++KY A+ A + + TS T+ I K + +Q + E P PL
Sbjct: 24 TGVFDITKYGANSNADISEALLNAFKEACQSTSPSTIVIPKGTFTM-NQVKLEGPCKSPL 82
Query: 138 PSYGRGRDEPGGRFSSLIFGTNLT----DVVVTGGNATINGQGEPWWIKYRKKQFNVTRP 193
+ + S L G LT D G ++GQ W + K+ N P
Sbjct: 83 ELQIQATLKAPSDPSQLKVGEWLTVNKLDQFTMSGGGILDGQAAAAWECKQSKKCN-KLP 141
Query: 194 YLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTN 253
+ N I ++T +DS S++V+ N+ + AP +SPNTDGI+ ++
Sbjct: 142 NNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSRSSS 201
Query: 254 TRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGI 313
I D+ +GDDC I VG T+ L I R+ C I++GS GG
Sbjct: 202 VNITDSNFSTGDDC-----------ISVGDETEQLYITRVTC--GPGHGISVGSL--GGN 246
Query: 314 KD------VRAEDITAINTQSGVRIKT-AVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYG 366
D V + T NT +GVRIKT V +++ + ++ + + Y
Sbjct: 247 PDEKPVVGVFVRNCTFTNTDNGVRIKTWPASHPGVVNDVHFEDIIVQNVSNPVVIDQVYC 306
Query: 367 SHPDPGFDPKALPTVTGINYRDMVADNVTQSA-KLDGIRNDPFTGICISNVTIKLTEKPK 425
D + ++ ++++++ + TQ A L + P GI + ++ I + K
Sbjct: 307 PFNKCNKDLPSQVKISKVSFQNIKGTSRTQDAVSLLRSKGVPCEGIEVGDIDITYSGKEG 366
Query: 426 ELQWNCTNIQ-GITSRVTPQAC 446
+ +C NI+ + + P C
Sbjct: 367 PAKSSCENIKPSLKGKQNPPVC 388
>sp|P05117|PGLR_SOLLC Polygalacturonase-2 OS=Solanum lycopersicum GN=PG2 PE=1 SV=1
Length = 457
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 112/252 (44%), Gaps = 20/252 (7%)
Query: 203 NVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIV 262
N++++NL ++ ++ +NV+ L I A SPNTDG++ + +I D I
Sbjct: 208 NLKVNNLKSKNAQQIHIKFESCTNVVASNLMINASAKSPNTDGVHVSNTQYIQISDTIIG 267
Query: 263 SGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGG----IKDVRA 318
+GDDC+++ SG +Q++ + C P I++GS SG + +V
Sbjct: 268 TGDDCISIVSG-----------SQNVQATNITC-GP-GHGISIGSLGSGNSEAYVSNVTV 314
Query: 319 EDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKAL 378
+ I ++GVRIKT G I + M+ +KY + +Y +P +
Sbjct: 315 NEAKIIGAENGVRIKTWQGGSGQASNIKFLNVEMQDVKYPIIIDQNYCDRVEPCIQQFSA 374
Query: 379 PTVTGINYRDMVADNVTQSA-KLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQ-G 436
V + Y ++ + T+ A K D N P GI + N+ + + E K + C N+
Sbjct: 375 VQVKNVVYENIKGTSATKVAIKFDCSTNFPCEGIIMENINL-VGESGKPSEATCKNVHFN 433
Query: 437 ITSRVTPQACEL 448
VTP L
Sbjct: 434 NAEHVTPHCTSL 445
>sp|P48979|PGLR_PRUPE Polygalacturonase OS=Prunus persica PE=2 SV=1
Length = 393
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 143/307 (46%), Gaps = 27/307 (8%)
Query: 149 GRFSSLIFGTNLTDVVVTGGNATINGQGEPWW-IKYRKKQFNVTRPYLIEVMFSDNVQIS 207
G ++ IF ++ V ++GG ++GQG W K + + + S+N+ +S
Sbjct: 104 GNAANWIFFHHVNGVTISGG--ILDGQGTALWACKACHGESCPSGATTLGFSDSNNIVVS 161
Query: 208 NLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDC 267
L ++S +++ NV +QG+ + +SPNTDGI+ + I ++ I +GDDC
Sbjct: 162 GLASLNSQMFHIVINDFQNVQMQGVRVSRSGNSPNTDGIHVQMSSGVTILNSKIATGDDC 221
Query: 268 VAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAI-ALGSEM-SGGIKDVRAEDITAIN 325
V++ G T +L I + C +I +LG E G+++V + +T
Sbjct: 222 VSIGPG-----------TSNLWIEGVACGPGHGISIGSLGKEQEEAGVQNVTVKTVTFSG 270
Query: 326 TQSGVRIKTAVGR--GAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTV-- 381
TQ+G+RIK+ GR + + I + TM ++ + Y PD P + V
Sbjct: 271 TQNGLRIKSW-GRPSTGFARNILFQHATMVNVENPIVIDQHY--CPDNKGCPGQVSGVQI 327
Query: 382 TGINYRDMVADNVTQSA-KLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSR 440
+ + Y D+ + T+ A K D P I + +V KLT K + + +C++ G T
Sbjct: 328 SDVTYEDIHGTSATEVAVKFDCSPKHPCREIKLEDV--KLTYKNQAAESSCSHADGTTEG 385
Query: 441 VT-PQAC 446
V P +C
Sbjct: 386 VVQPTSC 392
>sp|P48978|PGLR_MALDO Polygalacturonase OS=Malus domestica PE=2 SV=1
Length = 460
Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 158/375 (42%), Gaps = 54/375 (14%)
Query: 61 DFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLT----SHFTLYI 116
DFG G+G +T+AF A + ++ G L+VP +L + S TL I
Sbjct: 103 DFGAKGNG-ADDTQAFVKAWK--AACSSSGAMVLVVPQKNYLVRPIEFSGPCKSQLTLQI 159
Query: 117 HKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG 176
+ + AS+D S + + LIF N+ +++V G TING G
Sbjct: 160 Y--GTIEASEDRSIYKDIDHW----------------LIF-DNVQNLLVVGP-GTINGNG 199
Query: 177 EPWWIKYRKKQ----FNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQG- 231
WW K + P + +N+ + NL + D+ +H ++ + + +Q
Sbjct: 200 NIWWKNSCKIKPQPPCGTYAPTAVTFNRCNNLVVKNLNIQDAQQ--IHVIFQNCINVQAS 257
Query: 232 -LTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLII 290
LT+ AP DSPNTDGI+ + N I + I +GDDC+++ SG +Q +
Sbjct: 258 CLTVTAPEDSPNTDGIHVTNTQNITISSSVIGTGDDCISIVSG-----------SQRVQA 306
Query: 291 RRLICISPDSAAIALGSEMSGGIKD----VRAEDITAINTQSGVRIKTAVGRGAYVKEIY 346
+ C I++GS G +D V T +G+RIKT G I
Sbjct: 307 TDITC--GPGHGISIGSLGEDGSEDHVSGVFVNGAKLSGTSNGLRIKTWKGGSGSATNIV 364
Query: 347 VRRMTMKTMKYVFWMTGDYGSHPDPGF-DPKALPTVTGINYRDMVADNVTQSA-KLDGIR 404
+ + M + + +Y H K+ V + Y+++ + + A L+ +
Sbjct: 365 FQNVQMNDVTNPIIIDQNYCDHKTKDCKQQKSAVQVKNVLYQNIRGTSASGDAITLNCSQ 424
Query: 405 NDPFTGICISNVTIK 419
+ P GI + +V ++
Sbjct: 425 SVPCQGIVLQSVQLQ 439
>sp|P18192|PGLR1_PECCC Endo-polygalacturonase OS=Pectobacterium carotovorum subsp.
carotovorum GN=peh PE=3 SV=1
Length = 402
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 123/272 (45%), Gaps = 36/272 (13%)
Query: 101 WLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPP----LPSYGRGRDEPGGRFSSLIF 156
+L+G +L S +L I K L A + + P + + G+G D + I
Sbjct: 78 FLSGPLSLPSGVSLLIDKGVTLRAVNNAKSFENAPSSCGVVDTNGKGCD-------AFIT 130
Query: 157 GTNLTDVVVTGGNATINGQGE--------PWW---IKYRKKQFNVTRPYLIEVMFSDNVQ 205
T+ T+ + G TI+GQG WW + K+ P LI++ S N
Sbjct: 131 ATSTTNSGIYGP-GTIDGQGGVKLQDKKVSWWDLAADAKVKKLKQNTPRLIQINKSKNFT 189
Query: 206 ISNLTLIDSPSWNVHPVYSSNVLIQG--LTIRAPIDSPNTDGINPDSCTNTRIEDNYIVS 263
+ N++LI+SP N H V+S TI+ P + NTDGI+P S N I + I +
Sbjct: 190 LYNVSLINSP--NFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAHSNIST 247
Query: 264 GDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITA 323
GDD VA+K+ K T+++ I L +++GSE + G+ +V +D+
Sbjct: 248 GDDNVAIKA------YKGRSETRNISI--LHNEFGTGHGMSIGSE-TMGVYNVTVDDLIM 298
Query: 324 INTQSGVRIKTAVGRGAYVKEIYVRRMTMKTM 355
T +G+RIK+ V + + MK +
Sbjct: 299 TGTTNGLRIKSDKSAAGVVNGVRYSNVVMKNV 330
>sp|P26509|PGLR2_PECSS Endo-polygalacturonase OS=Pectobacterium sp. (strain SCC3193)
GN=pehA PE=1 SV=1
Length = 402
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 120/268 (44%), Gaps = 28/268 (10%)
Query: 101 WLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNL 160
+L+G +L S +L I K L A + + PS D+ G + I +
Sbjct: 78 FLSGPLSLPSGVSLLIDKGVTLRAVNNAKSFE---NAPSSCGVVDKNGKGCDAFITAVST 134
Query: 161 TDVVVTGGNATINGQGE--------PWW---IKYRKKQFNVTRPYLIEVMFSDNVQISNL 209
T+ + G TI+GQG WW + K+ P LI++ S N + N+
Sbjct: 135 TNSGIYGP-GTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYNV 193
Query: 210 TLIDSPSWNVHPVYSSN--VLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDC 267
+LI+SP N H V+S TI+ P + NTDGI+P S N I + I +GDD
Sbjct: 194 SLINSP--NFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDN 251
Query: 268 VAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQ 327
VA+K+ K T+++ I L +++GSE + G+ +V +D+ T
Sbjct: 252 VAIKA------YKGRAETRNISI--LHNDFGTGHGMSIGSE-TMGVYNVTVDDLKMNGTT 302
Query: 328 SGVRIKTAVGRGAYVKEIYVRRMTMKTM 355
+G+RIK+ V + + MK +
Sbjct: 303 NGLRIKSDKSAAGVVNGVRYSNVVMKNV 330
>sp|P49063|PGLR2_ARATH Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana
GN=At3g07850 PE=1 SV=2
Length = 444
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 132/308 (42%), Gaps = 28/308 (9%)
Query: 159 NLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSD--NVQISNLTLIDSPS 216
N+ D + G A +GQG W + I + F+ N +I+++T +S
Sbjct: 153 NIADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKL 212
Query: 217 WNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDE 276
++++ + N+ + + I AP +S NTDGI+ + I +GDDCV++ G
Sbjct: 213 FHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDG--- 269
Query: 277 YGIKVGMPTQHLIIRRLICISPDSAAIALGS----EMSGGIKDVRAEDITAINTQSGVRI 332
T++LI+ + C P I++GS +K V NT +GVRI
Sbjct: 270 --------TENLIVENVEC-GP-GHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRI 319
Query: 333 KTAVGR-GAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPT---VTGINYRD 388
KT G I +TM + + +Y + G +P+ ++ + +
Sbjct: 320 KTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPY---GHCKAGVPSQVKLSDVTIKG 376
Query: 389 MVADNVTQSA-KLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITS-RVTPQAC 446
+ + T+ A KL + P T I +S++ + K C+NI+ I S ++ P AC
Sbjct: 377 IKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAAC 436
Query: 447 ELLPKKEP 454
+ K P
Sbjct: 437 TEVAKPGP 444
>sp|O42809|PGLRE_ASPNG Endopolygalacturonase E OS=Aspergillus niger GN=pgaE PE=1 SV=1
Length = 378
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 119/296 (40%), Gaps = 39/296 (13%)
Query: 161 TDVVVTGGN-ATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNV 219
TD+ VTG + A +NG G WW T+P + IS + + +SP
Sbjct: 111 TDITVTGADGAYLNGDGSRWW-DGEGSNGGKTKPKFFYAHDLTSSTISGIYIQNSPVQVF 169
Query: 220 HPVYSSNVLIQGLTIRAPI----DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWD 275
S+ + ++ +TI ++ NTDG + T I + + DDCVAV SG
Sbjct: 170 SIDGSTYLTMEDITIDNTDGDDGEAANTDGFDIGDSTYITITGANVYNQDDCVAVNSG-- 227
Query: 276 EYGIKVGMPTQHLIIRRLICISPDSAAI-ALGSEMSGGIKDVRAEDITAINTQSGVRIKT 334
+++ +C +I ++G +K+V D ++Q+GVRIKT
Sbjct: 228 ----------ENIYFSGGVCSGGHGLSIGSVGGRSDNTVKNVTFYDSDIKSSQNGVRIKT 277
Query: 335 AVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNV 394
G V E+ + +T+ + DYG + +D + GI D V DNV
Sbjct: 278 IYGDTGSVSEVTYKEITLSDIT-------DYGIVVEQNYDDTSESPTDGITIEDFVLDNV 330
Query: 395 TQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTPQACELLP 450
S + G +N+ I + W T++ +T T CE +P
Sbjct: 331 QGSVESSG-----------TNIYI-VCGSDSCTDWTWTDVD-VTGGKTSSDCENVP 373
>sp|A2QBB6|PGLRE_ASPNC Probable endopolygalacturonase E OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=pgaE PE=3 SV=1
Length = 378
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 103/248 (41%), Gaps = 26/248 (10%)
Query: 161 TDVVVTGGN-ATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNV 219
TD+ VTG + A +NG G WW T+P + IS + + +SP
Sbjct: 111 TDITVTGADGAYLNGDGSRWW-DGEGSNGGKTKPKFFYAHDLTSSTISGIYIQNSPVQVF 169
Query: 220 HPVYSSNVLIQGLTIRAPI----DSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWD 275
S+ + ++ +TI ++ NTDG + T I + + DDCVAV SG
Sbjct: 170 SIDGSTYLTMEDITIDNTDGDDGEAANTDGFDIGDSTYITITGANVYNQDDCVAVNSG-- 227
Query: 276 EYGIKVGMPTQHLIIRRLICISPDSAAI-ALGSEMSGGIKDVRAEDITAINTQSGVRIKT 334
+++ +C +I ++G +K+V D ++Q+GVRIKT
Sbjct: 228 ----------ENIYFSGGVCSGGHGLSIGSVGGRSDNTVKNVTFYDSEIKSSQNGVRIKT 277
Query: 335 AVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNV 394
G V E+ + +T+ + DYG + +D + GI D V DNV
Sbjct: 278 IYGDTGSVSEVTYKEITLSDIT-------DYGIVVEQNYDDTSKSPTDGITIEDFVLDNV 330
Query: 395 TQSAKLDG 402
S + G
Sbjct: 331 QGSVESSG 338
>sp|Q40312|PGLR_MEDSA Polygalacturonase OS=Medicago sativa PE=2 SV=1
Length = 421
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 168/416 (40%), Gaps = 58/416 (13%)
Query: 47 FQALNCRKHSAVL--TDFGGV--GDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWL 102
F A C S VL + FGG D + T A+N A ++ + A++++P G +
Sbjct: 13 FIADFCAAQSGVLDISKFGGKPNSDIGQALTSAWNEACASTT------AAKIVIPAGTYQ 66
Query: 103 TGSFNLTS--HFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNL 160
L + + D + A D PS +G ++ F L
Sbjct: 67 LNGIELKGPCKAPIELQVDGTIQAPAD----------PSVIKGTEQ---WFKFLYM---- 109
Query: 161 TDVVVTGGNATINGQGEPWWIK------YRKKQFNVTRPYLIEVMFSDNVQISNLTLIDS 214
D + G +GQG + K + K N F +N + +T DS
Sbjct: 110 -DHLTLSGKGVFDGQGATVYKKAAPASAWSGKNSNSKVFMNFGFNFVNNSIVRGVTSKDS 168
Query: 215 PSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGW 274
+++V N+ G TI AP DSPNTDGI+ T+ +I + I +GDDCV++ G
Sbjct: 169 KNFHVMVFGCKNITFDGFTITAPGDSPNTDGIHMGKSTDVKILNTNIGTGDDCVSIGDGS 228
Query: 275 DE---YGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVR 331
+ G+ G P L + L + + ++ + ++ T T +GVR
Sbjct: 229 KQITVQGVNCG-PGHGLSVGSLGKFTTEE-----------NVEGITVKNCTLTATDNGVR 276
Query: 332 IKT---AVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRD 388
IKT A G V +I+ +TM +K + +Y + ++ I++++
Sbjct: 277 IKTWPDAPGT-ITVSDIHFEDITMTNVKNPVIIDQEYYPWNQCSKKNPSKIKLSKISFKN 335
Query: 389 MVADNVT-QSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGITSRVTP 443
+ + T + L P G+ ++NV +K P + CTN++ + + P
Sbjct: 336 VKGTSGTAEGVVLICSSAVPCDGVELNNVDLKFNGAPTTAK--CTNVKPLVTGTAP 389
>sp|O74213|PGLR1_ASPAC Endopolygalacturonase I OS=Aspergillus aculeatus GN=pgaI PE=1 SV=1
Length = 378
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 108/250 (43%), Gaps = 30/250 (12%)
Query: 161 TDVVVTGGNA-TINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNV 219
+D+ +TG + +ING G WW T+P N IS L +++SP V
Sbjct: 111 SDLTITGASGHSINGDGSRWW-DGEGGNGGKTKPKFFAAHSLTNSVISGLKIVNSPV-QV 168
Query: 220 HPVYSSNVL-IQGLTIRAPID----SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGW 274
V S+ L ++ +TI NTD + + T I + + DDCVAV SG
Sbjct: 169 FSVAGSDYLTLKDITIDNSDGDDNGGHNTDAFDIGTSTYVTISGATVYNQDDCVAVNSG- 227
Query: 275 DEYGIKVGMPTQHLIIRRLICISPDSAAI-ALGSEMSGGIKDVRAEDITAINTQSGVRIK 333
+++ C +I ++G +K+V D T IN+ +GVRIK
Sbjct: 228 -----------ENIYFSGGYCSGGHGLSIGSVGGRSDNTVKNVTFVDSTIINSDNGVRIK 276
Query: 334 TAVGRGAYVKEIYVRRMTMKTM-KYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVAD 392
T + V ++ + +T+ ++ KY + +YG D + PT TG+ D V D
Sbjct: 277 TNIDTTGSVSDVTYKDITLTSIAKYGIVVQQNYG-------DTSSTPT-TGVPITDFVLD 328
Query: 393 NVTQSAKLDG 402
NV S G
Sbjct: 329 NVHGSVVSSG 338
>sp|P20041|PGLR_RALSL Polygalacturonase OS=Ralstonia solanacearum GN=pglA PE=1 SV=1
Length = 529
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 123/303 (40%), Gaps = 60/303 (19%)
Query: 101 WLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNL 160
+L+GS L S TL+I L AS++ +++ L + G ++LI +
Sbjct: 101 FLSGSLKLKSGVTLWIDTGVTLFASRNPADYD--NGLGTCGTATTSNDKSCNALIVARDT 158
Query: 161 TDVVVTGGNATINGQGEP------------WW-IKY--RKKQFNVTRPYLIEVMFSDNVQ 205
+ G A I+G+G WW I Y + K N P LI+
Sbjct: 159 AGSGIVGAGA-IDGRGGSLVTSGPNANRLTWWDIAYLNKTKGLNQQNPRLIQTYNGSAFT 217
Query: 206 ISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPI-------------DSP----------- 241
+ +T+ +SP++++ +S V G+ I P +P
Sbjct: 218 LYGVTVQNSPNFHIVTTGTSGVTAWGIKIVTPSLAYAVAGYKCPSGSTPDKVTPATCFTP 277
Query: 242 ----NTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
NTDG +P TN + +YI +GDD VAVK+ PT++L+
Sbjct: 278 ETVKNTDGFDPGQSTNVVLAYSYINTGDDHVAVKASSG--------PTRNLLFAHNHFYY 329
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQS----GVRIKTAVGRGAYVKEIYVRRMTMK 353
+++GSE + G+ ++ D+T S G+RIK+ RG V I + M+
Sbjct: 330 --GHGLSIGSETNTGVSNMLVTDLTMDGNDSSAGNGLRIKSDASRGGKVTNIVYDGICMR 387
Query: 354 TMK 356
+K
Sbjct: 388 NVK 390
>sp|Q27UB1|PGXB_ASPNG Exopolygalacturonase B OS=Aspergillus niger GN=pgxB PE=3 SV=1
Length = 438
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 83/183 (45%), Gaps = 23/183 (12%)
Query: 168 GNATINGQGEPWWIKYRKKQFNVTRPYLIEVMF-SDN---VQISNLTLIDSPSWN----- 218
G+ +NG G+ W+ ++ KQ V + ++F +DN + + +T ++SP W
Sbjct: 149 GSGVLNGNGQKWYDEFAGKQILVYNTFYRPILFLTDNATRISVEGITQLNSPCWTNFFVR 208
Query: 219 VHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYG 278
+ V NV I + A D NTDG++ + I GDDC + K
Sbjct: 209 TNDVSFDNVYIHAFSTNASSDPANTDGMDSLDVDGVSFTNMRIDVGDDCFSPKPN----- 263
Query: 279 IKVGMPTQHLIIRRLICISPDSAAIALGSEMSGG---IKDVRAEDITAINTQSGVRIKTA 335
T ++ ++ + C + ++ + +G I++V E++T +N Q+G R+K
Sbjct: 264 ------TTNIFVQNMWCNNTHGVSMGSIGQYAGEMDIIENVYIENVTLLNGQNGARLKAW 317
Query: 336 VGR 338
G+
Sbjct: 318 AGQ 320
>sp|A2QHG0|PGXB_ASPNC Probable exopolygalacturonase B OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=pgxB PE=3 SV=1
Length = 438
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 83/183 (45%), Gaps = 23/183 (12%)
Query: 168 GNATINGQGEPWWIKYRKKQFNVTRPYLIEVMF-SDN---VQISNLTLIDSPSWN----- 218
G+ +NG G+ W+ ++ KQ V + ++F +DN + + +T ++SP W
Sbjct: 149 GSGVLNGNGQKWYDEFAGKQILVYNTFYRPILFLTDNATRISVEGITQLNSPCWTNFFVR 208
Query: 219 VHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYG 278
+ V NV I + A D NTDG++ + I GDDC + K
Sbjct: 209 TNDVSFDNVYIHAFSTNASSDPANTDGMDSLDVDGVSFTNMRIDVGDDCFSPKPN----- 263
Query: 279 IKVGMPTQHLIIRRLICISPDSAAIALGSEMSGG---IKDVRAEDITAINTQSGVRIKTA 335
T ++ ++ + C + ++ + +G I++V E++T +N Q+G R+K
Sbjct: 264 ------TTNIFVQNMWCNNTHGVSMGSIGQYAGEMDIIENVYIENVTLLNGQNGARLKAW 317
Query: 336 VGR 338
G+
Sbjct: 318 AGQ 320
>sp|P49575|PGLRA_ASPPA Probable endopolygalacturonase A OS=Aspergillus parasiticus GN=pgaA
PE=2 SV=1
Length = 363
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 99/242 (40%), Gaps = 22/242 (9%)
Query: 155 IFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDS 214
+ GTN+ +G A I+G G WW T+P D+ I+ L + ++
Sbjct: 93 VSGTNIKVQQASG--AKIDGDGSRWW-DGEGGNGGKTKPKFFYAHKLDSSSITGLQIYNT 149
Query: 215 PSWNVHPVYSSNVLIQGLTI---RAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVK 271
P + S N+ I +TI + NTD + S T I+ + + DDC+A+
Sbjct: 150 PVQG-FSIQSDNLNITDVTIDNSAGTAEGHNTDAFDIGSSTYINIDGATVYNQDDCLAIN 208
Query: 272 SGWDEYGIKVGMPTQHLIIRRLICISPDSAAI-ALGSEMSGGIKDVRAEDITAINTQSGV 330
SG H+ C +I ++G ++DV + +N+Q+GV
Sbjct: 209 SG------------SHITFTNGYCDGGHGLSIGSVGGRSDNTVEDVTISNSKVVNSQNGV 256
Query: 331 RIKTAVGRGAYVKEIYVRRMTMKTM-KYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDM 389
RIKT G V + +T+ + KY + DY + P P TV+GI + +
Sbjct: 257 RIKTVYGATGTVSNVKFEDITLSGITKYGLVVEQDY-ENGSPTGTPTNGITVSGITFEKV 315
Query: 390 VA 391
Sbjct: 316 TG 317
>sp|P15922|PEHX_ERWCH Exo-poly-alpha-D-galacturonosidase OS=Erwinia chrysanthemi GN=pehX
PE=1 SV=1
Length = 602
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 133/341 (39%), Gaps = 55/341 (16%)
Query: 59 LTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHK 118
+T +G GDG T NT A AI A G ++ VP G + TG+ L S TL + +
Sbjct: 154 ITQYGAKGDGTTLNTSAIQKAID-----ACPTGCRIDVPAGVFKTGALWLKSDMTLNLLQ 208
Query: 119 DALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSL-----IFGTNLTDVVVTGGNATIN 173
A LL S + +++P + SY + P +++ GT +V G I+
Sbjct: 209 GATLLGSDNAADYPDAYKIYSY-VSQVRPASLLNAIDKNSSAVGTFKNIRIV--GKGIID 265
Query: 174 GQG--------------EPWWIKY-------------------------RKKQFNVTRPY 194
G G P ++K K ++ R
Sbjct: 266 GNGWKRSADAKDELGNTLPQYVKSDNSKVSKDGILAKNQVAAAVATGMDTKTAYSQRRSS 325
Query: 195 LIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNT 254
L+ + N I+++T+ + + + + S NV ++ I ++ N DG+ + N
Sbjct: 326 LVTLRGVQNAYIADVTIRNPANHGIMFLESENV-VENSVIHQTFNANNGDGVEFGNSQNI 384
Query: 255 RIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIK 314
+ ++ +GDD + +G + K P+Q+ + A+ LGS GI
Sbjct: 385 MVFNSVFDTGDDSINFAAGMGQDAQK-QEPSQNAWLFNNF-FRHGHGAVVLGSHTGAGIV 442
Query: 315 DVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTM 355
DV AE+ G+R K+A G I R MK +
Sbjct: 443 DVLAENNVITQNDVGLRAKSAPAIGGGAHGIVFRNSAMKNL 483
>sp|Q1HAY5|PGLRB_ASPKA Probable endopolygalacturonase B OS=Aspergillus kawachii GN=pgaB
PE=3 SV=1
Length = 362
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 103/251 (41%), Gaps = 27/251 (10%)
Query: 157 GTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPS 216
GT++T +G A IN G WW + T+P + D I+ L + ++P
Sbjct: 92 GTDITVKQASG--AKINCDGARWW-DGKGSNGGKTKPKFFQAHKLDESSITGLKIYNTPV 148
Query: 217 WNVHPVYSSNVLIQGLTIRAPIDSP---NTDGINPDSCTNTRIEDNYIVSGDDCVAVKSG 273
+ + ++ I +TI + NTD + T I+ + + DDC+A+ SG
Sbjct: 149 QGF-SILADHLTITDVTIDDSAGTSKGHNTDAFDIGQSTYITIDGATVYNQDDCLAINSG 207
Query: 274 WDEYGIKVGMPTQHLIIRRLICISPDSAAI-ALGSEMSGGIKDVRAEDITAINTQSGVRI 332
+H+ C +I ++G + DV + +N+Q+GVRI
Sbjct: 208 ------------EHITFTNGYCDGGHGLSIGSIGGRSDNTVNDVTISNSKVVNSQNGVRI 255
Query: 333 KTAVGRGAYVKEIYVRRMTMKTM-KYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVA 391
KT G+ V+ + +T+ + KY + DY + P PT G+ D+
Sbjct: 256 KTIYGKTGTVENVKFEDITLSDISKYGIVVEQDYENGS-----PTGTPT-NGVKVEDITF 309
Query: 392 DNVTQSAKLDG 402
VT S K G
Sbjct: 310 KKVTGSVKSSG 320
>sp|Q9P4W3|PGLRB_ASPNG Endopolygalacturonase B OS=Aspergillus niger GN=pgaB PE=1 SV=1
Length = 362
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 104/256 (40%), Gaps = 37/256 (14%)
Query: 157 GTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPS 216
GT++T +G A IN G WW + T+P + D I+ L + ++P
Sbjct: 92 GTDITVKQASG--AKINCDGARWW-DGKGSNGGKTKPKFFQAHKLDQSSITGLKVYNTP- 147
Query: 217 WNVHPVYSSNVLIQGLTIR-APIDSP-------NTDGINPDSCTNTRIEDNYIVSGDDCV 268
V ++L LTI ID+ NTD + T I+ + + DDC+
Sbjct: 148 -----VQGFSILADHLTITDVTIDNSAGTSKGHNTDAFDIGQSTYITIDGATVYNQDDCL 202
Query: 269 AVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAI-ALGSEMSGGIKDVRAEDITAINTQ 327
A+ SG +H+ C +I ++G + DV + +N+Q
Sbjct: 203 AINSG------------EHITFTNGYCDGGHGLSIGSIGGRSDNTVNDVTISNSKVLNSQ 250
Query: 328 SGVRIKTAVGRGAYVKEIYVRRMTMKTM-KYVFWMTGDYGSHPDPGFDPKALPTVTGINY 386
+GVRIKT G+ V+ + +T+ + KY + DY + P PT G+
Sbjct: 251 NGVRIKTIYGKTGTVENVKFEDITLSDISKYGIVVEQDYENGS-----PTGTPT-NGVKV 304
Query: 387 RDMVADNVTQSAKLDG 402
D+ VT S K G
Sbjct: 305 EDITFKKVTGSVKSSG 320
>sp|A2QCV8|PGLRB_ASPNC Probable endopolygalacturonase B OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=pgaB PE=3 SV=1
Length = 362
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 104/256 (40%), Gaps = 37/256 (14%)
Query: 157 GTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPS 216
GT++T +G A IN G WW + T+P + D I+ L + ++P
Sbjct: 92 GTDITVKQASG--AKINCDGARWW-DGKGSNGGKTKPKFFQAHKLDQSSITGLKVYNTP- 147
Query: 217 WNVHPVYSSNVLIQGLTIR-APIDSP-------NTDGINPDSCTNTRIEDNYIVSGDDCV 268
V ++L LTI ID+ NTD + T I+ + + DDC+
Sbjct: 148 -----VQGFSILADHLTITDVTIDNSAGTSKGHNTDAFDIGQSTYITIDGATVYNQDDCL 202
Query: 269 AVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAI-ALGSEMSGGIKDVRAEDITAINTQ 327
A+ SG +H+ C +I ++G + DV + +N+Q
Sbjct: 203 AINSG------------EHITFTNGYCDGGHGLSIGSIGGRSDNTVNDVTISNSKVLNSQ 250
Query: 328 SGVRIKTAVGRGAYVKEIYVRRMTMKTM-KYVFWMTGDYGSHPDPGFDPKALPTVTGINY 386
+GVRIKT G+ V+ + +T+ + KY + DY + P PT G+
Sbjct: 251 NGVRIKTIYGKTGTVENVKFEDITLSDISKYGIVVEQDYENGS-----PTGTPT-NGVKV 304
Query: 387 RDMVADNVTQSAKLDG 402
D+ VT S K G
Sbjct: 305 EDITFKKVTGSVKSSG 320
>sp|P58598|PGLR_RALSO Polygalacturonase OS=Ralstonia solanacearum (strain GMI1000)
GN=pglA PE=3 SV=1
Length = 531
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 118/303 (38%), Gaps = 60/303 (19%)
Query: 101 WLTGSFNLTSHFTLYIHKDALLLASQDESEW------------PLLPPLPSYGRGRDEPG 148
+L+GS L S TL+I L AS++ +++ + RD G
Sbjct: 103 FLSGSLKLKSGVTLWIDTGVTLFASRNPADFDNGVGTCGTATTSNTKSCNALIVARDTVG 162
Query: 149 GRFSSLIFGTNLTDVVVTGGNATINGQGEPWW-IKY--RKKQFNVTRPYLIEVMFSDNVQ 205
+VT G N WW I Y + K N P L+++
Sbjct: 163 SGIVGDGIIDGRGGSLVTSG---PNANRLTWWDIAYLNKTKGLNQQNPRLVQLYNGSAFT 219
Query: 206 ISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDS------------------------- 240
+ +T+ +SP++++ ++ V G+ I P +
Sbjct: 220 LYRVTVQNSPNFHIVTTGTAGVTAWGIKIVTPSLAYTVPGYKCAAGTTPDKVTPATCFTP 279
Query: 241 ---PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297
NTDG +P TN + ++YI +GDD VA+K+ G T++L+
Sbjct: 280 ETVKNTDGFDPGQSTNVVLANSYISTGDDHVAIKAS--------GGATRNLLFAHNHFYY 331
Query: 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQS----GVRIKTAVGRGAYVKEIYVRRMTMK 353
+++GSE GG+ +++ D+ S G+RIK+ + RG V I + M+
Sbjct: 332 --GHGLSIGSETDGGVSNMQVTDLAMDGNDSSGGNGLRIKSDISRGGKVNNIVYNGICMR 389
Query: 354 TMK 356
+K
Sbjct: 390 NVK 392
>sp|O42824|PGLR_PENJA Polygalacturonase OS=Penicillium janthinellum PE=3 SV=1
Length = 371
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 104/258 (40%), Gaps = 32/258 (12%)
Query: 155 IFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDS 214
I G+++T V A IN G WW T+P D+ IS L + ++
Sbjct: 100 ISGSDIT--VEAADGAVINADGSRWW-DGEGTNGGKTKPKFFYAHSLDDSTISGLNIKNT 156
Query: 215 PSWNVHPVYSSNVLIQGLTIRAPIDSPN----TDGINPDSCTNTRIEDNYIVSGDDCVAV 270
P + S N++I G+TI N TDG + T I + + + DDC+A+
Sbjct: 157 PV-QAFSIQSDNLIIDGVTIDNSDGDENGGHNTDGFDISESTGVTIRNAVVKNQDDCIAI 215
Query: 271 KSGWDEYGIKVGMPTQHLIIRRLICISPDSAAI-ALGSEMSGGIKDVRAEDITAINTQSG 329
SG Q++ C +I ++G +K+V D T ++ +G
Sbjct: 216 NSG------------QNIYFTGGTCSGGHGLSIGSVGGRDDNTVKNVTITDSTVTDSANG 263
Query: 330 VRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFD---PKALPTVTGINY 386
VRIKT V ++ +T+ + DYG + ++ P PT +G+
Sbjct: 264 VRIKTVYDATGSVSDVTFSDITVSGIT-------DYGIVIEQDYENGSPTGTPT-SGVPI 315
Query: 387 RDMVADNVTQSAKLDGIR 404
D+ +T S + D +
Sbjct: 316 TDLTVKGITGSVESDAVE 333
>sp|A2QK83|XGHA_ASPNC Probable endo-xylogalacturonan hydrolase A OS=Aspergillus niger
(strain CBS 513.88 / FGSC A1513) GN=xghA PE=3 SV=1
Length = 406
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 127/326 (38%), Gaps = 45/326 (13%)
Query: 57 AVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGK--WLTGSFNLTSHFTL 114
AV T G GD T + A A+S+ G ++ P G +L +L +
Sbjct: 35 AVCTPTAG-GDSSTDDVPAITEALSSCGN-----GGTIVFPEGSTYYLNSVLDLGNCSNC 88
Query: 115 YIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATING 174
I + LL + D W + S D G + SL G+ I+G
Sbjct: 89 DIQVEGLLKFASDTDYWSGRTAMISV---SDVDGLKLRSLT------------GSGVIDG 133
Query: 175 QGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPS-WNVHPVYSSNVLIQGLT 233
G+ W + + +RP L+ + N++IS L + P+ +N ++NV+ L
Sbjct: 134 NGQDAWDLFASDS-SYSRPTLLYITGGSNLEISGLRQKNPPNVFNSVKGGATNVVFSNLK 192
Query: 234 IRA--PIDSP--NTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLI 289
+ A D+P NTDG + T I + +V+ DDCVA+K + ++
Sbjct: 193 MDANSKSDNPPKNTDGFDIGESTYVTITEVTVVNDDDCVALKP-----------SSNYVT 241
Query: 290 IRRLICISPDSAAI-ALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAY----VKE 344
+ + C ++ +LG +K++ T IN+ IKT G + V
Sbjct: 242 VDTISCTGSHGISVGSLGKSSDDSVKNIYVTGATMINSTKAAGIKTYPSGGDHGTSTVSN 301
Query: 345 IYVRRMTMKTMKYVFWMTGDYGSHPD 370
+ T+ Y F + YG D
Sbjct: 302 VTFTDFTVDNSDYAFQIQSCYGEDDD 327
>sp|A1DBR6|PGLRD_NEOFI Probable endopolygalacturonase D OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pgaD
PE=3 SV=1
Length = 472
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 98/226 (43%), Gaps = 34/226 (15%)
Query: 145 DEPGGRFSSLIFGTNLTDVVVTGGNA-TINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDN 203
D P F ++ + TDV +TG + I+G G +W + + I
Sbjct: 181 DTPDDDFDPIVI--SGTDVTITGADGHVIDGNGAAYWDGKGSNGGSSKPDHFIVAKHMYY 238
Query: 204 VQISNLTLIDSPSWNVHPV---YSSNVLIQGLTI-RAPIDSPNT-----------DGINP 248
+I NL + +W VH ++ N++I G+T+ + D+PN+ DG +
Sbjct: 239 SRIENLNI---QNWPVHCFDIEHTENLIISGITLDNSAGDAPNSASGSKPAAHNSDGFDI 295
Query: 249 DSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAI-ALGS 307
S TN ++++++ + DDCVAV SG D +++ + C +I ++G
Sbjct: 296 KSSTNLTLQNSWVHNQDDCVAVSSGTD------------IVVDNMYCYGGHGLSIGSIGG 343
Query: 308 EMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMK 353
+ + V + IN+ +G RIK+ G V I +T+
Sbjct: 344 KSDNTVDGVTFSNSQVINSSNGCRIKSNSGTTGEVSNIRYENITVS 389
>sp|Q8NK99|PGLRA_ASPKW Probable endopolygalacturonase A OS=Aspergillus kawachii (strain
NBRC 4308) GN=pgaA PE=3 SV=1
Length = 370
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 107/250 (42%), Gaps = 27/250 (10%)
Query: 162 DVVVT-GGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVH 220
D+ VT +A +NG G WW T+P D+ +IS L + ++P +
Sbjct: 101 DITVTQSSDAVLNGNGAKWW-DGEGTNGGKTKPKFFYAHDLDDSKISGLYIKNTPVQAI- 158
Query: 221 PVYSSNVLIQGLTI-RAPIDSP---NTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDE 276
V S N++I+ +TI + DS NTDG + T I + + DDCVA+ SG
Sbjct: 159 SVESDNLVIEDVTIDNSDGDSEGGHNTDGFDISESTYITITGATVKNQDDCVAINSG--- 215
Query: 277 YGIKVGMPTQHLIIRRLICISPDSAAI-ALGSEMSGGIKDVRAEDITAINTQSGVRIKTA 335
+++ C +I ++G +K+V D T ++++GVRIKT
Sbjct: 216 ---------ENIYFSGGTCSGGHGLSIGSVGGRDDNTVKNVTFIDSTVSDSENGVRIKTV 266
Query: 336 VGRGAYVKEIYVRRMTMKTMK-YVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNV 394
V++I + + + Y + DY DP P+ G+ D+ +++
Sbjct: 267 YDATGTVEDITYSNIQLSGISDYGIVIEQDY-----ENGDPTGTPS-NGVTISDVTLEDI 320
Query: 395 TQSAKLDGIR 404
T S D +
Sbjct: 321 TGSVDSDAVE 330
>sp|Q2UHL4|PGLR1_ASPOR Endopolygalacturonase I OS=Aspergillus oryzae (strain ATCC 42149 /
RIB 40) GN=pgaI PE=1 SV=1
Length = 367
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 104/249 (41%), Gaps = 29/249 (11%)
Query: 156 FGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSP 215
FG N V G A I+GQG WW + T+P I + I L + +SP
Sbjct: 96 FGGNKITVTQAAG-AVIDGQGSRWW-DGKGTNGGKTKPKFIYAHKLQSSTIKGLHVKNSP 153
Query: 216 SWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSG-----DDCVAV 270
V V ++V + +TI D N G N D+ + YI DDC+A+
Sbjct: 154 V-QVFSVQGNDVHLTDITIDNS-DGDNNGGHNTDAFDVSESNGVYITGANVKNQDDCLAI 211
Query: 271 KSGWDEYGIKVGMPTQHLIIRRLICISPDSAAI-ALGSEMSGGIKDVRAEDITAINTQSG 329
SG +++ C +I ++G+ S +K+V+ D T +++ +G
Sbjct: 212 NSG------------ENIEFTGATCSGGHGISIGSIGNRDSNTVKNVKVADSTVVDSDNG 259
Query: 330 VRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDPGFDPKALPTVTGINYRD 388
+RIKT G V + +T+K +K + DY + P PT TG+ D
Sbjct: 260 IRIKTISGATGSVSGVTYENITLKNIKKNGIVIEQDYKNGG-----PTGKPT-TGVPITD 313
Query: 389 MVADNVTQS 397
+ + VT S
Sbjct: 314 LTVNGVTGS 322
>sp|B8N8M2|PGLR1_ASPFN Probable endopolygalacturonase I OS=Aspergillus flavus (strain ATCC
200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167)
GN=pgaI PE=3 SV=1
Length = 367
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 104/249 (41%), Gaps = 29/249 (11%)
Query: 156 FGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSP 215
FG N V G A I+GQG WW + T+P I + I L + +SP
Sbjct: 96 FGGNKITVTQAAG-AVIDGQGSRWW-DGKGTNGGKTKPKFIYAHKLQSSTIKGLHVKNSP 153
Query: 216 SWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSG-----DDCVAV 270
V V ++V + +TI D N G N D+ + YI DDC+A+
Sbjct: 154 V-QVFSVQGNDVHLTDITIDNS-DGDNNGGHNTDAFDVSESNGVYITGANVKNQDDCLAI 211
Query: 271 KSGWDEYGIKVGMPTQHLIIRRLICISPDSAAI-ALGSEMSGGIKDVRAEDITAINTQSG 329
SG +++ C +I ++G+ S +K+V+ D T +++ +G
Sbjct: 212 NSG------------ENIEFTGATCSGGHGISIGSIGNRDSNTVKNVKVADSTVVDSDNG 259
Query: 330 VRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDPGFDPKALPTVTGINYRD 388
+RIKT G V + +T+K +K + DY + P PT TG+ D
Sbjct: 260 IRIKTISGATGSVSGVTYENITLKNIKKNGIVIEQDYKNGG-----PTGKPT-TGVPITD 313
Query: 389 MVADNVTQS 397
+ + VT S
Sbjct: 314 LTVNGVTGS 322
>sp|Q27UB2|PGXA_ASPNG Exopolygalacturonase A OS=Aspergillus niger GN=pgxA PE=3 SV=1
Length = 434
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 20/178 (11%)
Query: 168 GNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNV 227
G I+G G+ WW + +V RP L+ + IS LT+++SP+W S+++
Sbjct: 145 GKGVIDGAGQYWWSAMAEDS-SVMRPCLLGTDGLHHATISGLTMLNSPNWFNLIANSTDI 203
Query: 228 LIQGLT--IRAPI-DSP--NTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVG 282
LI +T + + I D+P NTDG + +N I+D+ IV+ DDCV+ K
Sbjct: 204 LISNMTMLVESEISDAPAKNTDGWDIYRSSNIVIQDSRIVNTDDCVSFKPN--------- 254
Query: 283 MPTQHLIIRRLICISPDSAAIALGSEMSGG---IKDVRAEDITAINTQSGVRIKTAVG 337
+ ++I+ L C ++ + G ++D+ +I+ + RIK G
Sbjct: 255 --STQIVIQNLDCTGSHGISVGSLGQYQGETDIVEDLYIYNISMTDASDVARIKVWPG 310
>sp|A2QW66|PGXA_ASPNC Probable exopolygalacturonase A OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=pgxA PE=3 SV=1
Length = 434
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 20/178 (11%)
Query: 168 GNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNV 227
G I+G G+ WW + +V RP L+ + IS LT+++SP+W S+++
Sbjct: 145 GKGVIDGAGQYWWSAMAEDS-SVMRPCLLGTDGLHHATISGLTMLNSPNWFNLIANSTDI 203
Query: 228 LIQGLT--IRAPI-DSP--NTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVG 282
LI +T + + I D+P NTDG + +N I+D+ IV+ DDCV+ K
Sbjct: 204 LISNMTMLVESEISDAPAKNTDGWDIYRSSNIVIQDSRIVNTDDCVSFKPN--------- 254
Query: 283 MPTQHLIIRRLICISPDSAAIALGSEMSGG---IKDVRAEDITAINTQSGVRIKTAVG 337
+ ++I+ L C ++ + G ++D+ +I+ + RIK G
Sbjct: 255 --STQIVIQNLDCTGSHGISVGSLGQYQGETDIVEDLYIYNISMTDASDVARIKVWPG 310
>sp|B8NG16|PGLRX_ASPFN Probable exopolygalacturonase X OS=Aspergillus flavus (strain ATCC
200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167)
GN=pgaX PE=3 SV=1
Length = 433
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 88/200 (44%), Gaps = 20/200 (10%)
Query: 152 SSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTL 211
++ F TDV V GG +NG G+ W+ Y + + RP L+ ++ I L L
Sbjct: 128 ATTFFNLGGTDVNVYGG-GELNGNGQVWYDLYAEDAL-ILRPILVGIIGLHGGTIGPLKL 185
Query: 212 IDSPSWNVHPVYSSNVLIQGLTIR----APIDSPNTDGINPDSCTNTRIEDNYIVSGDDC 267
SP W SS+VL G+ I + ++ NTDG + +N I+++ I +GDDC
Sbjct: 186 RYSPQWYQLVANSSDVLFDGIDISGYSSSENEAKNTDGWDTYRSSNIVIQNSVINNGDDC 245
Query: 268 VAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGG---IKDVRAEDITAI 324
V+ K E ++++ L C ++ + G +++V +I+
Sbjct: 246 VSFKPNSTE-----------ILVQNLHCNGSHGISVGSLGQYQGEVDIVQNVLVYNISMY 294
Query: 325 NTQSGVRIKTAVGRGAYVKE 344
N RIK G + + E
Sbjct: 295 NASDMARIKVWPGISSAMSE 314
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 189,774,705
Number of Sequences: 539616
Number of extensions: 8412087
Number of successful extensions: 17817
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 118
Number of HSP's that attempted gapping in prelim test: 17532
Number of HSP's gapped (non-prelim): 192
length of query: 481
length of database: 191,569,459
effective HSP length: 121
effective length of query: 360
effective length of database: 126,275,923
effective search space: 45459332280
effective search space used: 45459332280
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)