Query 011615
Match_columns 481
No_of_seqs 378 out of 2197
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 11:48:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011615.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011615hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jur_A EXO-poly-alpha-D-galact 100.0 2.6E-71 8.8E-76 573.3 34.0 353 51-421 22-413 (448)
2 1bhe_A PEHA, polygalacturonase 100.0 3.5E-64 1.2E-68 512.9 39.8 348 55-436 13-374 (376)
3 1rmg_A Rgase A, rhamnogalactur 100.0 1.5E-62 5.1E-67 506.1 38.3 334 50-436 14-355 (422)
4 2uvf_A Exopolygalacturonase; G 100.0 1.2E-62 4.3E-67 528.3 37.2 356 51-421 151-564 (608)
5 1czf_A Polygalacturonase II; b 100.0 1.4E-58 4.9E-63 467.0 31.7 319 55-436 28-358 (362)
6 1hg8_A Endopolygalacturonase; 100.0 2.8E-56 9.6E-61 448.8 34.7 317 72-436 7-345 (349)
7 2iq7_A Endopolygalacturonase; 100.0 2.4E-56 8.1E-61 448.3 31.2 316 71-436 6-333 (339)
8 1nhc_A Polygalacturonase I; be 100.0 2.1E-56 7.2E-61 448.1 30.7 316 70-436 5-332 (336)
9 1ia5_A Polygalacturonase; glyc 100.0 1.1E-55 3.8E-60 443.1 33.1 313 72-436 11-335 (339)
10 1k5c_A Endopolygalacturonase; 100.0 6E-56 2E-60 443.4 23.8 307 73-435 8-328 (335)
11 2x6w_A Tail spike protein; vir 100.0 2.5E-51 8.5E-56 426.1 18.8 300 54-421 49-384 (600)
12 1x0c_A Isopullulanase; glycosi 100.0 1.9E-44 6.5E-49 380.6 20.7 309 57-421 143-521 (549)
13 1ogo_X Dextranase; hydrolase, 100.0 1.1E-41 3.6E-46 359.2 27.3 269 89-421 229-546 (574)
14 1h80_A IOTA-carrageenase; hydr 100.0 1.1E-41 3.8E-46 351.5 22.8 270 50-390 15-301 (464)
15 3gq8_A Preneck appendage prote 100.0 7E-41 2.4E-45 349.7 28.8 274 54-394 20-309 (609)
16 3gqn_A Preneck appendage prote 100.0 1E-40 3.5E-45 353.1 26.4 275 53-394 19-309 (772)
17 2vbk_A Tailspike-protein; vira 100.0 7.3E-36 2.5E-40 294.6 10.3 228 54-327 49-286 (514)
18 2pyg_A Poly(beta-D-mannuronate 100.0 6E-31 2E-35 268.6 22.1 314 56-421 2-360 (377)
19 3eqn_A Glucan 1,3-beta-glucosi 99.9 5.4E-23 1.9E-27 218.1 21.7 246 52-361 45-303 (758)
20 3jur_A EXO-poly-alpha-D-galact 99.9 5.4E-22 1.8E-26 204.9 25.0 231 153-421 191-444 (448)
21 1czf_A Polygalacturonase II; b 99.9 1.3E-20 4.3E-25 190.0 27.6 201 195-422 89-320 (362)
22 2iq7_A Endopolygalacturonase; 99.9 4.9E-20 1.7E-24 184.5 29.0 203 194-422 61-295 (339)
23 1ia5_A Polygalacturonase; glyc 99.9 4.8E-20 1.7E-24 184.4 28.6 203 194-422 65-297 (339)
24 2uvf_A Exopolygalacturonase; G 99.9 6.8E-20 2.3E-24 196.7 26.8 249 153-445 332-608 (608)
25 1nhc_A Polygalacturonase I; be 99.9 1.8E-19 6.3E-24 180.1 27.8 193 195-422 62-294 (336)
26 1hg8_A Endopolygalacturonase; 99.8 6.2E-19 2.1E-23 177.0 27.8 206 194-422 62-307 (349)
27 1k5c_A Endopolygalacturonase; 99.8 1.3E-19 4.3E-24 180.8 19.9 197 195-419 60-286 (335)
28 1rmg_A Rgase A, rhamnogalactur 99.8 2E-18 6.8E-23 177.5 28.6 173 218-421 129-310 (422)
29 1bhe_A PEHA, polygalacturonase 99.8 3E-18 1E-22 174.2 25.8 198 193-421 100-338 (376)
30 1ogo_X Dextranase; hydrolase, 99.7 4.2E-15 1.4E-19 156.8 23.8 251 90-394 263-546 (574)
31 1x0c_A Isopullulanase; glycosi 99.6 2.5E-15 8.5E-20 158.6 18.2 199 196-421 238-482 (549)
32 1h80_A IOTA-carrageenase; hydr 99.6 2E-14 6.8E-19 148.3 16.4 159 199-401 106-278 (464)
33 2inu_A Insulin fructotransfera 99.5 2.5E-13 8.6E-18 135.2 16.8 242 53-334 11-283 (410)
34 3gq8_A Preneck appendage prote 99.4 4.4E-11 1.5E-15 125.4 22.0 182 197-421 101-309 (609)
35 3gqn_A Preneck appendage prote 99.3 5.6E-11 1.9E-15 126.6 20.8 183 196-421 100-309 (772)
36 2pyg_A Poly(beta-D-mannuronate 99.3 3.8E-11 1.3E-15 121.9 18.3 173 193-402 172-368 (377)
37 2x6w_A Tail spike protein; vir 99.3 6.1E-12 2.1E-16 131.2 8.6 181 194-421 142-343 (600)
38 3eqn_A Glucan 1,3-beta-glucosi 99.2 1.4E-10 4.7E-15 123.7 13.5 70 52-126 396-466 (758)
39 1dbg_A Chondroitinase B; beta 99.1 5.5E-09 1.9E-13 108.8 21.7 209 72-334 30-272 (506)
40 1ru4_A Pectate lyase, PEL9A; p 99.0 2.3E-08 8E-13 101.6 20.8 246 55-362 15-299 (400)
41 1pcl_A Pectate lyase E; lyase 98.6 7.5E-07 2.6E-11 88.7 17.3 85 242-327 132-228 (355)
42 1idk_A Pectin lyase A; signal, 98.6 1.8E-06 6E-11 86.2 17.2 89 223-326 131-233 (359)
43 2qy1_A Pectate lyase II; GAG l 98.5 1.2E-06 4.1E-11 86.6 13.9 103 223-326 93-204 (330)
44 3zsc_A Pectate trisaccharide-l 98.5 6.4E-06 2.2E-10 81.2 18.0 74 242-327 115-195 (340)
45 1pxz_A Major pollen allergen J 98.4 1.8E-06 6.3E-11 85.7 12.1 74 241-326 148-226 (346)
46 3uw0_A Pectinesterase; right-h 98.4 9.3E-06 3.2E-10 81.0 16.8 109 199-326 119-255 (364)
47 1xg2_A Pectinesterase 1; prote 98.4 4.7E-06 1.6E-10 81.8 14.0 139 195-355 84-239 (317)
48 1gq8_A Pectinesterase; hydrola 98.3 5.9E-06 2E-10 81.1 14.5 139 195-355 88-243 (319)
49 3zsc_A Pectate trisaccharide-l 98.3 1.4E-05 4.8E-10 78.7 15.7 168 161-357 62-251 (340)
50 3vmv_A Pectate lyase; polysacc 98.3 6.5E-06 2.2E-10 80.8 13.2 90 224-326 102-204 (326)
51 1qcx_A Pectin lyase B; beta-he 98.2 1.7E-05 5.8E-10 79.1 14.9 70 242-326 152-233 (359)
52 2x3h_A K5 lyase, K5A lyase; ba 98.2 0.00023 8E-09 67.2 21.5 175 55-273 63-247 (542)
53 1pxz_A Major pollen allergen J 98.2 1.4E-05 4.8E-10 79.4 14.1 139 195-355 107-271 (346)
54 1qcx_A Pectin lyase B; beta-he 98.2 6.5E-05 2.2E-09 74.9 17.5 149 195-360 125-284 (359)
55 1air_A Pectate lyase C, PELC; 98.1 5.4E-06 1.8E-10 82.5 9.3 109 217-326 103-215 (353)
56 1vbl_A Pectate lyase 47; PL 47 98.1 6.4E-06 2.2E-10 83.6 9.2 97 218-326 149-282 (416)
57 2o04_A Pectate lyase, PL; hexa 98.0 1.2E-05 4E-10 81.2 8.8 96 218-326 144-276 (399)
58 1idk_A Pectin lyase A; signal, 98.0 0.00014 4.9E-09 72.4 15.8 172 161-360 102-284 (359)
59 1pe9_A Pectate lyase A; parall 98.0 2.7E-05 9.1E-10 77.6 10.2 93 222-326 111-238 (361)
60 1air_A Pectate lyase C, PELC; 97.9 9.8E-05 3.4E-09 73.4 13.2 146 195-360 104-265 (353)
61 2inu_A Insulin fructotransfera 97.8 6.5E-05 2.2E-09 74.9 10.0 122 192-335 121-262 (410)
62 1ru4_A Pectate lyase, PEL9A; p 97.7 0.00072 2.5E-08 68.5 16.0 143 195-361 109-275 (400)
63 2nsp_A Pectinesterase A; micha 97.6 0.0014 4.9E-08 64.8 16.8 62 200-267 94-176 (342)
64 1pcl_A Pectate lyase E; lyase 97.5 0.0014 4.8E-08 65.1 14.5 124 195-326 97-249 (355)
65 1vbl_A Pectate lyase 47; PL 47 97.5 0.00054 1.8E-08 69.4 10.9 123 195-326 149-304 (416)
66 3vmv_A Pectate lyase; polysacc 97.4 0.0034 1.1E-07 61.5 15.3 143 160-332 78-233 (326)
67 2o04_A Pectate lyase, PL; hexa 97.4 0.00061 2.1E-08 68.7 9.8 123 195-327 144-299 (399)
68 1pe9_A Pectate lyase A; parall 97.3 0.00087 3E-08 66.7 9.9 124 195-326 104-260 (361)
69 2qy1_A Pectate lyase II; GAG l 97.3 0.0012 4.2E-08 65.0 10.4 149 195-360 87-254 (330)
70 2vbk_A Tailspike-protein; vira 96.6 0.003 1E-07 63.3 7.1 132 196-366 140-293 (514)
71 3grh_A YBHC, acyl-COA thioeste 96.5 0.34 1.2E-05 48.7 21.0 145 196-355 195-362 (422)
72 3t9g_A Pectate lyase; PL3, par 96.2 0.14 4.7E-06 45.4 14.1 110 225-360 52-162 (196)
73 3t9g_A Pectate lyase; PL3, par 95.3 0.91 3.1E-05 40.1 15.8 163 170-359 21-185 (196)
74 1ee6_A Pectate lyase; parallel 94.7 0.28 9.6E-06 43.5 10.8 42 225-272 48-90 (197)
75 1dbg_A Chondroitinase B; beta 94.3 0.21 7.3E-06 51.7 11.0 144 194-355 216-391 (506)
76 1ee6_A Pectate lyase; parallel 93.9 0.5 1.7E-05 41.9 10.9 64 201-270 47-110 (197)
77 1gq8_A Pectinesterase; hydrola 92.7 2.2 7.7E-05 41.3 14.6 110 222-354 91-208 (319)
78 1xg2_A Pectinesterase 1; prote 92.7 1.3 4.5E-05 42.9 12.8 110 222-354 87-204 (317)
79 3b4n_A Endo-pectate lyase; pec 91.9 4.8 0.00016 38.8 15.1 38 341-388 262-300 (344)
80 3riq_A Tailspike protein; righ 91.8 4.8 0.00016 39.7 15.1 157 190-352 142-344 (543)
81 2nsp_A Pectinesterase A; micha 87.9 8.8 0.0003 37.5 14.0 110 223-355 94-230 (342)
82 3uw0_A Pectinesterase; right-h 87.0 8.7 0.0003 37.9 13.5 113 222-354 119-254 (364)
83 3b4n_A Endo-pectate lyase; pec 86.2 9 0.00031 36.9 12.4 41 227-272 160-201 (344)
84 3ju4_A Endo-N-acetylneuraminid 83.3 0.31 1E-05 48.3 0.9 23 62-84 4-26 (670)
85 2vfm_A Bifunctional tail prote 76.4 11 0.00039 36.3 9.1 65 285-351 269-352 (559)
86 2v5i_A Salmonella typhimurium 72.5 10 0.00036 36.6 7.8 65 285-351 272-355 (559)
87 2v5i_A Salmonella typhimurium 67.0 38 0.0013 32.7 10.4 94 285-392 319-425 (559)
88 2vfm_A Bifunctional tail prote 66.3 39 0.0013 32.7 10.2 94 285-392 316-422 (559)
89 3grh_A YBHC, acyl-COA thioeste 66.2 77 0.0026 31.6 13.0 124 221-354 197-330 (422)
90 2xc1_A Bifunctional tail prote 65.5 22 0.00074 35.9 8.6 65 285-351 376-459 (666)
91 3riq_A Tailspike protein; righ 65.2 48 0.0016 32.7 10.8 54 286-348 308-362 (543)
92 2xc1_A Bifunctional tail prote 58.4 57 0.002 32.9 10.1 128 251-392 376-529 (666)
No 1
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=100.00 E-value=2.6e-71 Score=573.32 Aligned_cols=353 Identities=31% Similarity=0.575 Sum_probs=313.7
Q ss_pred cccceEEEEeecCccCCCccchHHHHHHHHHHhhhcccCCCcEEEeCCCcceeeeEEeccceeEEEccCcEEEecCCCCC
Q 011615 51 NCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESE 130 (481)
Q Consensus 51 ~~~~~~~nV~dyGA~gDG~tDdt~Aiq~Ai~~a~~~~~~~g~~v~iP~G~Yl~~~i~l~s~~~l~l~~ga~i~~~~~~~~ 130 (481)
..++.++||++|||+|||++|||+|||+||++|++ .++++|+||+|+|++++|.|+|+++|+++ |+|++++++++
T Consensus 22 ~~~~~~~~v~~~GA~gdg~tddt~Aiq~Ai~~c~~---~ggg~v~vP~G~yl~~~l~l~s~v~l~l~--gtL~~s~d~~~ 96 (448)
T 3jur_A 22 QIPDREVNLLDFGARGDGRTDCSESFKRAIEELSK---QGGGRLIVPEGVFLTGPIHLKSNIELHVK--GTIKFIPDPER 96 (448)
T ss_dssp CCCSCEEEGGGGTCCCEEEEECHHHHHHHHHHHHH---HTCEEEEECSSEEEESCEECCTTEEEEES--SEEEECCCGGG
T ss_pred CCCCcEEEEEecccCCCCCeecHHHHHHHHHhhhh---cCCeEEEECCCcEEEeeeEeCCCcEEEEE--EEEEecCCHHH
Confidence 35567999999999999999999999999998875 57899999999999999999999999987 99999999999
Q ss_pred C-CCCCCCCCCCCCCCCCCCCceeeEEEeceeceEEEccceeeeCCC--chhhhhcccc---------------------
Q 011615 131 W-PLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG--EPWWIKYRKK--------------------- 186 (481)
Q Consensus 131 ~-~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~ni~I~G~~G~idG~g--~~ww~~~~~~--------------------- 186 (481)
| +.. ...++|.+. ..+.+||++.+++||+|+|. |+|||+| +.||+.....
T Consensus 97 y~p~~---~~~~~G~~~--~~~~~lI~~~~~~ni~ItG~-GtIDG~G~~~~ww~~~~~~~~~~~~~~~~~~~~~~~l~~~ 170 (448)
T 3jur_A 97 YLPVV---LTRFEGIEL--YNYSPLVYALDCENVAITGS-GVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEM 170 (448)
T ss_dssp GCSCE---EEEETTEEE--EESCCSEEEESCEEEEEESS-CEEECCCBTTBBGGGGCCGGGTCCTTSCCSHHHHHHHHHH
T ss_pred hCccc---ccccccccc--cCccceEEEeCcEeeEEEEe-EEEECCCCchhhhhhcccccccccccccccccchhhhhhh
Confidence 8 321 111233221 13567999999999999996 9999999 8999753210
Q ss_pred -------------CCCCCCCeeEEEEeeccEEEEeeEEeeCCCCeEEeeccccEEEEeEEEECCCCCCCCCCcCCCCCcc
Q 011615 187 -------------QFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTN 253 (481)
Q Consensus 187 -------------~~~~~rp~~i~~~~~~nv~I~g~~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~n 253 (481)
.....||.+|.|.+|+|++|+|++++|+|+|++++..|+|++|++++|.++ ++|+||||+.+|+|
T Consensus 171 ~~~~~p~~~~~~~~~~~~RP~~i~~~~~~nv~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~--~~NtDGidi~~s~n 248 (448)
T 3jur_A 171 AERGTPVEERVFGKGHYLRPSFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISST--GPNNDGIDPESCKY 248 (448)
T ss_dssp HHHTCCGGGCBCSTTCCCCCCSEEEESCEEEEEESCEEESCSSCSEEEESCEEEEEESCEEEEC--STTCCSBCCBSCEE
T ss_pred hcccCcchhhhccccccCCceEEEEEcccceEEEeeEEEeCCCceEeeeccCCEEEEeEEEeec--cCCCccccccCCcC
Confidence 123579999999999999999999999999999999999999999999997 68999999999999
Q ss_pred EEEEecEEecCCceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCc-eEEeccCcCCCEEEEEEEeeEEEcCCceEEE
Q 011615 254 TRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSA-AIALGSEMSGGIKDVRAEDITAINTQSGVRI 332 (481)
Q Consensus 254 V~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~-gisIGs~~~~~v~nI~v~n~~~~~~~~Gi~I 332 (481)
|+|+||+|.+|||||+++++++.+|.+++.|++||+|+||+|+...+| ||+|||++.++++||+|+||+|.++.+|+||
T Consensus 249 V~I~n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~~~~v~nV~v~n~~~~~t~~GirI 328 (448)
T 3jur_A 249 MLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVVARNNVYMNVERALRL 328 (448)
T ss_dssp EEEESCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSCTTCEEEEEEESCEEESCSEEEEE
T ss_pred EEEEeeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcccCcEEEEEEEEEEEecccceEEE
Confidence 999999999999999999998888888899999999999999543355 9999999999999999999999999999999
Q ss_pred EeecCCCceeecEEEEeeEEccceeeE-EEEcccCCCCCCCCCCCCCCeEEeEEEEEEEEEccCeeEEEeccCCCCeeeE
Q 011615 333 KTAVGRGAYVKEIYVRRMTMKTMKYVF-WMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGI 411 (481)
Q Consensus 333 kt~~g~~g~v~nI~f~ni~~~~~~~~i-~i~~~y~~~~~~~~~~~~~~~i~nItf~nI~~~~~~~~~~l~g~~~~~~~~I 411 (481)
|||.+++|.|+||+|+||+|+++.+|+ .|++.|+... +...+.|+||+|+||++++...++.|.|+++.||+||
T Consensus 329 Kt~~g~gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~~-----~~~~~~i~nI~~~NI~~t~~~~~i~i~g~~~~p~~~I 403 (448)
T 3jur_A 329 KTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDNEE-----GEYLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDI 403 (448)
T ss_dssp ECCTTTCSEEEEEEEESCEEEEESSEEEEEESCGGGCC-----CSCCCEEEEEEEESCEEEECSEEEEEECBTTBCEEEE
T ss_pred EEEcCCCceEeeEEEEEEEEECCccccEEEEeeccCCC-----CCCCceEEEEEEEeEEEEecceEEEEEeCCCCCEeeE
Confidence 999998999999999999999999988 9999997541 2234799999999999998888999999999999999
Q ss_pred EEEeEEEEec
Q 011615 412 CISNVTIKLT 421 (481)
Q Consensus 412 ~~~ni~i~~~ 421 (481)
+|+||+++..
T Consensus 404 ~~~nv~i~~~ 413 (448)
T 3jur_A 404 LISDTIIEGA 413 (448)
T ss_dssp EEEEEEEESC
T ss_pred EEEEEEEEcc
Confidence 9999999864
No 2
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=100.00 E-value=3.5e-64 Score=512.91 Aligned_cols=348 Identities=25% Similarity=0.374 Sum_probs=300.9
Q ss_pred eEEEEeecCccCCCccchHHHHHHHHHHhhhcccCCCcEEEeCC---CcceeeeEEeccceeEEEccCcEEEecCCCCCC
Q 011615 55 HSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPP---GKWLTGSFNLTSHFTLYIHKDALLLASQDESEW 131 (481)
Q Consensus 55 ~~~nV~dyGA~gDG~tDdt~Aiq~Ai~~a~~~~~~~g~~v~iP~---G~Yl~~~i~l~s~~~l~l~~ga~i~~~~~~~~~ 131 (481)
.+++|++|| .+|||+|||+||++|. . |++|+||+ |+|++++|.|+|+++|+++.||+|+++.++.+|
T Consensus 13 ~~~~v~~~G-----~~~dT~aiq~Ai~ac~----~-Gg~v~~~~~~~g~yl~g~i~l~s~vtL~l~~Ga~L~~s~~~~~y 82 (376)
T 1bhe_A 13 SSCTTLKAD-----SSTATSTIQKALNNCD----Q-GKAVRLSAGSTSVFLSGPLSLPSGVSLLIDKGVTLRAVNNAKSF 82 (376)
T ss_dssp CEEEEEECC-----SSBCHHHHHHHHTTCC----T-TCEEEEECSSSSEEEESCEECCTTCEEEECTTCEEEECSCSGGG
T ss_pred CeEEECCCC-----CCccHHHHHHHHHHhc----c-CCcEEEECCCCceEEEeEEEECCCCEEEECCCeEEEeCCCHHHC
Confidence 369999986 5799999999999664 3 55666654 799999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCceeeEEEeceeceEEEccceeeeCCC--------chhhhhccc---cCCCCCCCeeEEEEe
Q 011615 132 PLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQG--------EPWWIKYRK---KQFNVTRPYLIEVMF 200 (481)
Q Consensus 132 ~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~ni~I~G~~G~idG~g--------~~ww~~~~~---~~~~~~rp~~i~~~~ 200 (481)
+.... .++ +.+..+....+||++.+++||+|+|. |+|||+| +.||+.... ......||.+|.|.+
T Consensus 83 ~~~~~--~~g-~~~~~g~~~~~~I~~~~~~ni~I~G~-G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~~i~~~~ 158 (376)
T 1bhe_A 83 ENAPS--SCG-VVDKNGKGCDAFITAVSTTNSGIYGP-GTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINK 158 (376)
T ss_dssp BSSTT--CSS-CEESCSCCBCCSEEEESCBSCEEECS-SEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEES
T ss_pred cCCCc--ccc-ccccCCCCcccEEEEECCEeEEEEeC-EEEECCCCcccCCCccccccccccccccCccCCCCeEEEEEc
Confidence 75432 111 12222223468999999999999996 9999999 579975321 112346899999999
Q ss_pred eccEEEEeeEEeeCCCCeEEeeccccEEEEeEEEECCCCCCCCCCcCCCCCccEEEEecEEecCCceeeecCCCCccCcc
Q 011615 201 SDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIK 280 (481)
Q Consensus 201 ~~nv~I~g~~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~ 280 (481)
|+|++|+|++++|+|.||+++..|++++|++++|.++..++|+||||+++|+||+|+||+|.++||||+++++.
T Consensus 159 ~~nv~I~~iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks~~------ 232 (376)
T 1bhe_A 159 SKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKAYK------ 232 (376)
T ss_dssp CEEEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECSSCSEEEEECT------
T ss_pred ceEEEEEeEEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecCCCeEEEcccC------
Confidence 99999999999999999999999999999999999998889999999999999999999999999999999742
Q ss_pred cCCceeeEEEEEEEEeCCCCceEEeccCcCCCEEEEEEEeeEEEcCCceEEEEeecCCCceeecEEEEeeEEccceeeEE
Q 011615 281 VGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFW 360 (481)
Q Consensus 281 ~~~~s~nI~I~n~~~~~~~~~gisIGs~~~~~v~nI~v~n~~~~~~~~Gi~Ikt~~g~~g~v~nI~f~ni~~~~~~~~i~ 360 (481)
...|++||+|+||+|.+ +||++|||++. +++||+|+||+|.++.+|+|||||++++|.|+||+|+||+|+++.+||.
T Consensus 233 ~~~~s~nI~I~n~~~~~--ghGisiGSe~~-~v~nV~v~n~~~~~t~~GirIKt~~g~~G~v~ni~f~ni~~~~v~~~i~ 309 (376)
T 1bhe_A 233 GRAETRNISILHNDFGT--GHGMSIGSETM-GVYNVTVDDLKMNGTTNGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPIV 309 (376)
T ss_dssp TSCCEEEEEEEEEEECS--SSCEEEEEEES-SEEEEEEEEEEEESCSEEEEEECCTTTCCEEEEEEEEEEEEESCSEEEE
T ss_pred CCCCceEEEEEeeEEEc--cccEEeccCCc-cEeeEEEEeeEEeCCCcEEEEEEecCCCceEeeEEEEeEEEeCCCceEE
Confidence 13469999999999997 78999999987 8999999999999999999999999999999999999999999999999
Q ss_pred EEcccCCCCCCCCCCCCCCeEEeEEEEEEEEEccCeeEEEeccCCCCeeeEEEEeEEEEecCCCCccceEEeeeec
Q 011615 361 MTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQG 436 (481)
Q Consensus 361 i~~~y~~~~~~~~~~~~~~~i~nItf~nI~~~~~~~~~~l~g~~~~~~~~I~~~ni~i~~~~~~~~~~~~c~nv~g 436 (481)
|++.|++.. +...+.|+||+|+||++++.. ++.|.|+++.||++|+|+||+++.. ..|.|.|+..
T Consensus 310 i~~~y~~~~-----~~~~~~i~ni~~~ni~gt~~~-~~~l~g~~~~~~~~I~l~nv~l~~~-----~~~~~~~~~~ 374 (376)
T 1bhe_A 310 IDTVYEKKE-----GSNVPDWSDITFKDVTSETKG-VVVLNGENAKKPIEVTMKNVKLTSD-----STWQIKNVNV 374 (376)
T ss_dssp EETTSSCCC-----CCCCCEEEEEEEEEEEECSCC-EEEEECTTCSSCEEEEEEEEECCTT-----CEEEEESEEE
T ss_pred EEeeccCCC-----CCcCcEEEEEEEEEEEEEecc-eEEEEeCCCCCeeeEEEEeEEEecC-----CCceEEEEEe
Confidence 999997642 234478999999999999765 6889999999999999999999864 3599999875
No 3
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=100.00 E-value=1.5e-62 Score=506.08 Aligned_cols=334 Identities=16% Similarity=0.272 Sum_probs=286.8
Q ss_pred ccccceEEEEeecCccCCCccchHHHHHHHHHHhhhcccCCCcEEEeCCCcceeee-EEec--cceeEEEccCcEEEecC
Q 011615 50 LNCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGS-FNLT--SHFTLYIHKDALLLASQ 126 (481)
Q Consensus 50 ~~~~~~~~nV~dyGA~gDG~tDdt~Aiq~Ai~~a~~~~~~~g~~v~iP~G~Yl~~~-i~l~--s~~~l~l~~ga~i~~~~ 126 (481)
...+..+++|++|||++||++|||+|||+||++|. ++++|+||+|+|++++ |.|+ ++++|+++ +++++..
T Consensus 14 ~~~~~~~~~V~~~GA~~dg~tddT~Aiq~Ai~ac~-----~g~~V~vP~G~Yli~~~l~l~g~s~v~l~l~--G~~l~~~ 86 (422)
T 1rmg_A 14 TKGATKTCNILSYGAVADNSTDVGPAITSAWAACK-----SGGLVYIPSGNYALNTWVTLTGGSATAIQLD--GIIYRTG 86 (422)
T ss_dssp HHHHHCEEEGGGGTCCCSSSSBCHHHHHHHHHHHT-----BTCEEEECSSEEEECSCEEEESCEEEEEEEC--SEEEECC
T ss_pred hccCCcEEEeeeccccCCCCcccHHHHHHHHHHCC-----CCCEEEECCCeEEeCCceeecCCCeEEEEEc--CcEEccc
Confidence 34556799999999999999999999999999763 5889999999999985 9999 56777764 5565543
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCceeeEEEeceeceEEEccceeeeCCCchhhhhccccCCCCCCCeeEEEEeeccEEE
Q 011615 127 DESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQI 206 (481)
Q Consensus 127 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~ni~I~G~~G~idG~g~~ww~~~~~~~~~~~rp~~i~~~~~~nv~I 206 (481)
+.. ..+..++...++++++|+|. |+|||+|+.||.. ...||.+|+|.+|+|++|
T Consensus 87 ~~~-------------------~~~~~~~~~~~~~~i~i~G~-G~IdG~G~~~w~~------~~~rp~~i~~~~~~nv~I 140 (422)
T 1rmg_A 87 TAS-------------------GNMIAVTDTTDFELFSSTSK-GAVQGFGYVYHAE------GTYGARILRLTDVTHFSV 140 (422)
T ss_dssp CCS-------------------SEEEEEEEEEEEEEECSSSC-CEEECCTHHHHTT------TCCCCEEEEEEEEEEEEE
T ss_pred CCC-------------------CceEEEEecCceeEEeeccC-EEEECCcchhhcC------CCCCceEEEEcccceEEE
Confidence 210 01223455677777788896 9999999999963 123999999999999999
Q ss_pred EeeEEeeCCCCeEEeeccccEEEEeEEEECCCCCCCCCCcCCCCCccEEEEecEEecCCceeeecCCCCccCcccCCcee
Q 011615 207 SNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQ 286 (481)
Q Consensus 207 ~g~~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~ 286 (481)
+|++++|++.|++++..|+||+|+|++|.+ .+++|+||||+.+ +||+|+||+|.++||||+++++ ++
T Consensus 141 ~~iti~nsp~~~i~i~~~~nv~I~n~~I~~-~d~~ntDGidi~~-~nV~I~n~~i~~gDD~Iai~s~-----------~~ 207 (422)
T 1rmg_A 141 HDIILVDAPAFHFTMDTCSDGEVYNMAIRG-GNEGGLDGIDVWG-SNIWVHDVEVTNKDECVTVKSP-----------AN 207 (422)
T ss_dssp EEEEEECCSSCSEEEEEEEEEEEEEEEEEC-CSSTTCCSEEEEE-EEEEEEEEEEESSSEEEEEEEE-----------EE
T ss_pred ECeEEECCCceEEEEeCcCCEEEEeEEEEC-CCCCCCccEeecC-CeEEEEeeEEeCCCCeEEeCCC-----------Cc
Confidence 999999999999999999999999999999 4568999999998 9999999999999999999985 89
Q ss_pred eEEEEEEEEeCCCCceEEeccCc-CCCEEEEEEEeeEEEcCCceEEEEeecCCCceeecEEEEeeEEccceeeEEEEccc
Q 011615 287 HLIIRRLICISPDSAAIALGSEM-SGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDY 365 (481)
Q Consensus 287 nI~I~n~~~~~~~~~gisIGs~~-~~~v~nI~v~n~~~~~~~~Gi~Ikt~~g~~g~v~nI~f~ni~~~~~~~~i~i~~~y 365 (481)
||+|+||+|.+ +|||+|||+. .+.++||+|+||+|.++.+|++||++.+ .|.|+||+|+||+|+++++||.|++.|
T Consensus 208 nI~I~n~~~~~--~~GisIGS~g~~~~v~nV~v~n~~~~~~~~Gi~Ikt~~g-~G~v~nI~~~NI~~~~v~~~i~i~~~y 284 (422)
T 1rmg_A 208 NILVESIYCNW--SGGCAMGSLGADTDVTDIVYRNVYTWSSNQMYMIKSNGG-SGTVSNVLLENFIGHGNAYSLDIDGYW 284 (422)
T ss_dssp EEEEEEEEEES--SSEEEEEEECTTEEEEEEEEEEEEEESSSCSEEEEEBBC-CEEEEEEEEEEEEEEEESCSEEEETBC
T ss_pred CEEEEeEEEcC--CcceeecccCCCCcEEEEEEEeEEEeccceEEEEEecCC-CcEEEEEEEEeEEEECccccEEEEeec
Confidence 99999999998 6799999986 4679999999999999999999999765 489999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCeEEeEEEEEEEEEcc----CeeEEEeccCCCCeeeEEEEeEEEEecCCCCccceEEeeeec
Q 011615 366 GSHPDPGFDPKALPTVTGINYRDMVADNV----TQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQG 436 (481)
Q Consensus 366 ~~~~~~~~~~~~~~~i~nItf~nI~~~~~----~~~~~l~g~~~~~~~~I~~~ni~i~~~~~~~~~~~~c~nv~g 436 (481)
+.... .+...+.|+||+|+||+++.. ..++.|.|+++.+|+||+|+||+++... +....+.|.|+.|
T Consensus 285 ~~~~~---~~~~~~~i~nI~~~nI~gt~~~g~~~~~i~i~~~~~~~~~ni~l~nv~i~~~~-g~~~~~~C~n~~g 355 (422)
T 1rmg_A 285 SSMTA---VAGDGVQLNNITVKNWKGTEANGATRPPIRVVCSDTAPCTDLTLEDIAIWTES-GSSELYLCRSAYG 355 (422)
T ss_dssp TTSCC---BSSSCCEEEEEEEEEEEEEESCTTTSCSEEEECBTTBCEEEEEEEEEEEEESS-SSCEEEEEESEEE
T ss_pred cCCCc---ccCCCceEEEEEEEeEEEEecccccceeEEEEeCCCCcEeeEEEEeEEEEcCC-CCccceEEECCCc
Confidence 75321 233457999999999999874 3578999999999999999999999763 3456799999986
No 4
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=100.00 E-value=1.2e-62 Score=528.29 Aligned_cols=356 Identities=24% Similarity=0.346 Sum_probs=299.6
Q ss_pred cccceEEEEeecCccCCCccchHHHHHHHHHHhhhcccCCCcEEEeCCCcceeeeEEeccceeEEEccCcEEEecCCCCC
Q 011615 51 NCRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESE 130 (481)
Q Consensus 51 ~~~~~~~nV~dyGA~gDG~tDdt~Aiq~Ai~~a~~~~~~~g~~v~iP~G~Yl~~~i~l~s~~~l~l~~ga~i~~~~~~~~ 130 (481)
...+.++||++|||+|||++|||+|||+||++|. .+++|+||+|+|++++|.|+|+++|+|+.+|+|+++.+.++
T Consensus 151 ~~~~~~~~v~~~Ga~~dg~~ddt~aiq~Ai~~c~-----~g~~v~vP~G~y~~g~i~lks~v~L~l~~gatL~~s~d~~~ 225 (608)
T 2uvf_A 151 SAKPQIVNVRDFGAIDDGKTLNTKAIQQAIDSCK-----PGCRVEIPAGTYKSGALWLKSDMTLNLQAGAILLGSENPDD 225 (608)
T ss_dssp CCCCCEEEGGGGTCCSSSSCCCHHHHHHHHHTCC-----TTEEEEECSEEEEECCEECCSSEEEEECTTEEEEECSCGGG
T ss_pred ccCCCEEecccccccCCCCccCHHHHHHHHHhcC-----CCCEEEECCCceEecceeccCceEEEecCCcEEEecCCHHH
Confidence 3456789999999999999999999999999663 38999999999999999999999999999999999999988
Q ss_pred CCCCCCCCCCCCCCCCCCCCceeeEEEec--------eeceEEEccceeeeCCCchhhhhccc----c------------
Q 011615 131 WPLLPPLPSYGRGRDEPGGRFSSLIFGTN--------LTDVVVTGGNATINGQGEPWWIKYRK----K------------ 186 (481)
Q Consensus 131 ~~~~~~~~~~~~g~~~~~~~~~~~i~~~~--------~~ni~I~G~~G~idG~g~~ww~~~~~----~------------ 186 (481)
|+....+..|.. ..++.++|++.+ ++||+|+|. |+|||+|..||+.... .
T Consensus 226 y~~~~~~~~~~~-----~~~~~~lI~~~~~~~~~~g~~~ni~I~G~-GtIDG~G~~~~~~~~~~~~~g~~~p~~~~~~~~ 299 (608)
T 2uvf_A 226 YPAGYRLYPYST-----IERPASLINAIDPNNSKPGTFRNIRITGS-GVIDGNGWLRAKTAEITDELGRSLPQYVASKNS 299 (608)
T ss_dssp SCEEECSSTTCC-----SCEECCSEEECCSSCCCTTSEEEEEEESS-CEEECCCBCEEEEEEEECTTSCEEEEECCCCTT
T ss_pred CcCcceeeeccc-----cccccceEEeeccccccccceeeEEEEee-EEEcCcccccccccccccccccccccccccccc
Confidence 863211111111 123457898887 799999996 9999999888742100 0
Q ss_pred --------------------CC-----CCCCCeeEEEEeeccEEEEeeEEeeCCCCeEEeeccccEEEEeEEEECCCCCC
Q 011615 187 --------------------QF-----NVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSP 241 (481)
Q Consensus 187 --------------------~~-----~~~rp~~i~~~~~~nv~I~g~~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~ 241 (481)
.. ...||.+|.|.+|+|++|+|++++|+++|++++..|+|++|++++|.. ..++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~rP~~i~~~~~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i~~-~~~~ 378 (608)
T 2uvf_A 300 KVHEDGILAKNQVEKAVSDGMDLKNAYGQRRSSLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQT-YDAN 378 (608)
T ss_dssp THHHHBSHHHHHHHHHHHTTCCHHHHHHHSSCCSEEEESEEEEEEESCEEECCSSCSEEEESCEEEEEESCEEEC-TTCT
T ss_pred cccccccccccccccccccccccccccccCCCeEEEEEeeeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEEcC-CCCC
Confidence 00 124899999999999999999999999999999999999999999865 4578
Q ss_pred CCCCcCCCCCccEEEEecEEecCCceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCce-EEeccCcCCCEEEEEEEe
Q 011615 242 NTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAA-IALGSEMSGGIKDVRAED 320 (481)
Q Consensus 242 n~DGI~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~g-isIGs~~~~~v~nI~v~n 320 (481)
|+||||+.+|+||+|+||+|.+|||||+++++++.+|.. .+|++||+|+||+|.+ +|| +.|||++.++++||+|+|
T Consensus 379 NtDGidi~~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~-~~~s~nI~I~n~~~~~--ghg~~~iGS~~~~~v~nI~v~n 455 (608)
T 2uvf_A 379 NGDGIEFGNSQNVMVFNNFFDTGDDCINFAAGTGEKAQE-QEPMKGAWLFNNYFRM--GHGAIVTGSHTGAWIEDILAEN 455 (608)
T ss_dssp TCCSEEEESCEEEEEESCEEECSSCSEEEECCCSGGGGG-SCCEEEEEEESCEECS--SSCSEEEESCCTTCEEEEEEES
T ss_pred CCCeEEecCCceEEEEeeEEecCCceEEecCCcCccccc-cccccCEEEEeEEEeC--CCCeEEEcccCCCCEEEEEEEe
Confidence 999999999999999999999999999999999888887 7889999999999998 455 469999999999999999
Q ss_pred eEEEcCCceEEEEeecCCCceeecEEEEeeEEccc-eeeEEEEcccCCCCC-CCCCCC-CCCeEEeEEEEEEEEEccC--
Q 011615 321 ITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTM-KYVFWMTGDYGSHPD-PGFDPK-ALPTVTGINYRDMVADNVT-- 395 (481)
Q Consensus 321 ~~~~~~~~Gi~Ikt~~g~~g~v~nI~f~ni~~~~~-~~~i~i~~~y~~~~~-~~~~~~-~~~~i~nItf~nI~~~~~~-- 395 (481)
|+|.++.+|+|||||.+++|.|+||+|+||+|+++ .+||.|++.|++... ..+++. ..+.+++|+|+||+..+..
T Consensus 456 ~~~~~t~~GirIKt~~g~gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt 535 (608)
T 2uvf_A 456 NVMYLTDIGLRAKSTSTIGGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGK 535 (608)
T ss_dssp CEEESCSEEEEEEEETTTCCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSS
T ss_pred EEEECCCceEEEeeecCCCceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeece
Confidence 99999999999999999999999999999999999 699999999986432 112222 2357888888888887753
Q ss_pred -eeEEEe--ccCCCCeeeEEEEeEEEEec
Q 011615 396 -QSAKLD--GIRNDPFTGICISNVTIKLT 421 (481)
Q Consensus 396 -~~~~l~--g~~~~~~~~I~~~ni~i~~~ 421 (481)
.++.+. |.+..||+||+|+||+++..
T Consensus 536 ~~~i~i~g~~~~~~p~~ni~~~nv~i~~~ 564 (608)
T 2uvf_A 536 NPSIEIKGDTANKAWHRLVHVNNVQLNNV 564 (608)
T ss_dssp SCSEEEECBGGGTBCEEEEEEEEEEEESC
T ss_pred EEeEEEEEEcCCCCccccEEEEeEEEEcc
Confidence 355555 45667999999999999865
No 5
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=1.4e-58 Score=467.02 Aligned_cols=319 Identities=22% Similarity=0.295 Sum_probs=271.2
Q ss_pred eEEEEeecCccCCCccchHHHHHHHHHHhhhcccCCCcEEEeCCCcceeeeE-EeccceeEEEccCcEEEecCCCCCCCC
Q 011615 55 HSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSF-NLTSHFTLYIHKDALLLASQDESEWPL 133 (481)
Q Consensus 55 ~~~nV~dyGA~gDG~tDdt~Aiq~Ai~~a~~~~~~~g~~v~iP~G~Yl~~~i-~l~s~~~l~l~~ga~i~~~~~~~~~~~ 133 (481)
.+++|++ ++|||+|+++|.+ .++++|+||+|+|+. + .|+++++|+++ +++.+. ...|.
T Consensus 28 ~~Ctv~~-----------~~aiq~ai~~c~~---~~g~~v~vP~G~~l~--l~~l~~~~~l~~~--g~~~~~--~~~w~- 86 (362)
T 1czf_A 28 DSCTFTT-----------AAAAKAGKAKCST---ITLNNIEVPAGTTLD--LTGLTSGTKVIFE--GTTTFQ--YEEWA- 86 (362)
T ss_dssp CEEEESS-----------HHHHHHHGGGCSE---EEEESCEECTTCCEE--ECSCCTTCEEEEE--SEEEEC--CCCSC-
T ss_pred CEEEECC-----------HHHHHHHHHHhhc---cCCCEEEECCCEEEE--eeccCCCeEEEEe--CcEEec--cccCC-
Confidence 5678775 7899999999875 467899999999973 4 67788888875 445442 23342
Q ss_pred CCCCCCCCCCCCCCCCCceeeEEEeceeceEEEcc-ceeeeCCCchhhhhccccCCCCCCCeeEEEEeeccEEEEeeEEe
Q 011615 134 LPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGG-NATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLI 212 (481)
Q Consensus 134 ~~~~~~~~~g~~~~~~~~~~~i~~~~~~ni~I~G~-~G~idG~g~~ww~~~~~~~~~~~rp~~i~~~~~~nv~I~g~~i~ 212 (481)
.+||.+. .+||+|+|. .|+|||+|+.||+.... ....||+++.|.+|+|++|+|++++
T Consensus 87 ------------------g~~i~~~-~~nv~I~G~~~g~IdG~G~~~w~~~~~--~~~~rP~~i~~~~~~nv~i~~iti~ 145 (362)
T 1czf_A 87 ------------------GPLISMS-GEHITVTGASGHLINCDGARWWDGKGT--SGKKKPKFFYAHGLDSSSITGLNIK 145 (362)
T ss_dssp ------------------CCSEEEE-EESCEEEECTTCEEECCGGGTCCSCTT--SSSCCCCCEEEEEEETEEEESCEEE
T ss_pred ------------------CcEEEEe-CccEEEEcCCCcEEECCCchhhcccCC--CCCCCCeEEEEeecccEEEEEEEEe
Confidence 2477764 599999993 39999999999986433 2567999999999999999999999
Q ss_pred eCCCCeEEeeccccEEEEeEEEECCCC----CCCCCCcCCCCCccEEEEecEEecCCceeeecCCCCccCcccCCceeeE
Q 011615 213 DSPSWNVHPVYSSNVLIQGLTIRAPID----SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHL 288 (481)
Q Consensus 213 ns~~~~i~~~~~~nv~i~~~~i~~~~~----~~n~DGI~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI 288 (481)
|+|+|++++. |+||+|++++|.++.+ ++|+||||+.+|+||+|+||+|.++||||++++ .+||
T Consensus 146 nsp~~~i~i~-~~nv~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiks------------g~nI 212 (362)
T 1czf_A 146 NTPLMAFSVQ-ANDITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDCLAVNS------------GENI 212 (362)
T ss_dssp CCSSCCEEEE-CSSEEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEECSSCSEEESS------------EEEE
T ss_pred cCCccEEEEe-eCCEEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEecCCCEEEEeC------------CeEE
Confidence 9999999999 9999999999999643 799999999999999999999999999999998 4999
Q ss_pred EEEEEEEeCCCCceEEeccC---cCCCEEEEEEEeeEEEcCCceEEEEeecCCCceeecEEEEeeEEccce-eeEEEEcc
Q 011615 289 IIRRLICISPDSAAIALGSE---MSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-YVFWMTGD 364 (481)
Q Consensus 289 ~I~n~~~~~~~~~gisIGs~---~~~~v~nI~v~n~~~~~~~~Gi~Ikt~~g~~g~v~nI~f~ni~~~~~~-~~i~i~~~ 364 (481)
+|+||+|.+ +|||+|||+ ..+.++||+|+||+|.++.+|+|||+|++++|.|+||+|+||+|+++. +||.|++.
T Consensus 213 ~i~n~~~~~--ghGisiGS~G~~~~~~v~nV~v~n~~~~~t~~GirIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~I~~~ 290 (362)
T 1czf_A 213 WFTGGTCIG--GHGLSIGSVGDRSNNVVKNVTIEHSTVSNSENAVRIKTISGATGSVSEITYSNIVMSGISDYGVVIQQD 290 (362)
T ss_dssp EEESCEEES--SCCEEEEEECSSSCCEEEEEEEEEEEEEEEEEEEEEEEETTCCEEEEEEEEEEEEEEEEEEEEEEEEEE
T ss_pred EEEEEEEeC--CceeEEeeccccCCCCEEEEEEEeeEEECCceEEEEEEeCCCCceEeeEEEEeEEEECcccccEEEEEe
Confidence 999999998 679999997 347899999999999999999999999998999999999999999996 79999999
Q ss_pred cCCCCCCCCCCCCCCeEEeEEEEEEEEEccC--eeEEEeccCCCCeeeEEEEeEEEEecCCCCccceEEeeeec
Q 011615 365 YGSHPDPGFDPKALPTVTGINYRDMVADNVT--QSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQG 436 (481)
Q Consensus 365 y~~~~~~~~~~~~~~~i~nItf~nI~~~~~~--~~~~l~g~~~~~~~~I~~~ni~i~~~~~~~~~~~~c~nv~g 436 (481)
|++.. ....|...+.|+||+|+||+++... .++.|.|. +.||+||+|+||+++.. ...+.|.|+..
T Consensus 291 Y~~~~-~~~~p~~~~~i~nI~~~ni~gt~~~~~~~i~i~c~-~~~c~ni~~~nv~i~~~----~~~~~C~n~~~ 358 (362)
T 1czf_A 291 YEDGK-PTGKPTNGVTIQDVKLESVTGSVDSGATEIYLLCG-SGSCSDWTWDDVKVTGG----KKSTACKNFPS 358 (362)
T ss_dssp EETTE-ECSCCCSSEEEEEEEEEEEEEEECTTSEEEEEECC-TTTEEEEEEEEEEEESS----BCCSCCBSCCT
T ss_pred cCCCC-CCCCCCCCceEEEEEEEEEEEEecCCceEEEEEeC-CCcCcCEEEEeEEEEcC----CCcccCcCCCC
Confidence 97632 1223444579999999999999874 78999998 79999999999999852 24467887763
No 6
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=100.00 E-value=2.8e-56 Score=448.84 Aligned_cols=317 Identities=21% Similarity=0.296 Sum_probs=267.2
Q ss_pred hHHHHHHHHHHhhhcccCCCcEEEeCCCcceeeeE-EeccceeEEEccCcEEEecCCCCCCCCCCCCCCCCCCCCCCCCC
Q 011615 72 NTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSF-NLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGR 150 (481)
Q Consensus 72 dt~Aiq~Ai~~a~~~~~~~g~~v~iP~G~Yl~~~i-~l~s~~~l~l~~ga~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 150 (481)
||+|||+|+++|.+ .++++|+||+|+|+. + .|+++++|.++ +++++. ...|..
T Consensus 7 ~t~aiq~ai~~c~~---~gg~~v~vP~G~~l~--l~~l~~~~~l~~~--g~~~~~--~~~w~~----------------- 60 (349)
T 1hg8_A 7 EYSGLATAVSSCKN---IVLNGFQVPTGKQLD--LSSLQNDSTVTFK--GTTTFA--TTADND----------------- 60 (349)
T ss_dssp SGGGHHHHHHHCSE---EEECCCEECTTCCEE--ETTCCTTCEEEEC--SEEEEC--CCCCTT-----------------
T ss_pred CHHHHHHHHHhccc---cCCCEEEECCCEEEE--eeccCCCeEEEEc--Cceecc--cccccC-----------------
Confidence 68999999999875 467899999999984 4 66788888875 445442 234411
Q ss_pred ceeeEEEeceeceEEEcc-ceeeeCCCchhhhhccccCCCCCCCeeEEE-E-eeccEEEEeeEEeeCCCCeEEeeccccE
Q 011615 151 FSSLIFGTNLTDVVVTGG-NATINGQGEPWWIKYRKKQFNVTRPYLIEV-M-FSDNVQISNLTLIDSPSWNVHPVYSSNV 227 (481)
Q Consensus 151 ~~~~i~~~~~~ni~I~G~-~G~idG~g~~ww~~~~~~~~~~~rp~~i~~-~-~~~nv~I~g~~i~ns~~~~i~~~~~~nv 227 (481)
.+||.+. .+||+|+|+ .|+|||+|+.||+..........||++|.| . .|+|++|+|++++|+|+|++++..|+||
T Consensus 61 -g~~i~~~-~~ni~I~G~~~G~IdG~G~~ww~~~~~~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp~~~i~i~~~~nv 138 (349)
T 1hg8_A 61 -FNPIVIS-GSNITITGASGHVIDGNGQAYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNLNIQNWPVHCFDITGSSQL 138 (349)
T ss_dssp -CCSEEEE-EESCEEEECTTCEEECCGGGTCCSCTTCTTSCCCCSEEEEEEEEESSEEEESCEEECCSSEEEEEESCEEE
T ss_pred -CceEEEE-CccEEEEecCCCEEcCCcchhhhcccccCCCCCCCeEEEEeecCcCcEEEEEEEEEcCCCceEEEeccCCE
Confidence 2577775 499999993 399999999999864332222268999999 7 7889999999999999999999999999
Q ss_pred EEEeEEEECCC-C-----------CCCCCCcCCCCCccEEEEecEEecCCceeeecCCCCccCcccCCceeeEEEEEEEE
Q 011615 228 LIQGLTIRAPI-D-----------SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLIC 295 (481)
Q Consensus 228 ~i~~~~i~~~~-~-----------~~n~DGI~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~ 295 (481)
+|++++|.++. + ++|+||||+.+|+||+|+||+|.++||||++++ .+||+|+||+|
T Consensus 139 ~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks------------g~nI~i~n~~~ 206 (349)
T 1hg8_A 139 TISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYNQDDCVAVTS------------GTNIVVSNMYC 206 (349)
T ss_dssp EEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEECSSCSEEESS------------EEEEEEEEEEE
T ss_pred EEEEEEEECCCCccccccccccccCCCCCeEEEccccEEEEEeeEEecCCCeEEeeC------------CeEEEEEeEEE
Confidence 99999999863 2 589999999999999999999999999999998 59999999999
Q ss_pred eCCCCceEEeccC---cCCCEEEEEEEeeEEEcCCceEEEEeecCCCceeecEEEEeeEEccce-eeEEEEcccCCCCCC
Q 011615 296 ISPDSAAIALGSE---MSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK-YVFWMTGDYGSHPDP 371 (481)
Q Consensus 296 ~~~~~~gisIGs~---~~~~v~nI~v~n~~~~~~~~Gi~Ikt~~g~~g~v~nI~f~ni~~~~~~-~~i~i~~~y~~~~~~ 371 (481)
.+ +|||+|||+ ..+.++||+|+||+|.++.+|+|||+|++++|.|+||+|+||+|+++. +||.|++.|++.. .
T Consensus 207 ~~--ghGisiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~Y~~~~-~ 283 (349)
T 1hg8_A 207 SG--GHGLSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSNSGATGTINNVTYQNIALTNISTYGVDVQQDYLNGG-P 283 (349)
T ss_dssp ES--SCCEEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEETTCCEEEEEEEEEEEEEEEEEEEEEEEEEEECSSS-B
T ss_pred eC--CcceEEccccccccCCEEEEEEEEEEEECCCcEEEEEecCCCCccccceEEEEEEEEccccccEEEEeeccCCC-C
Confidence 97 679999998 457899999999999999999999999998899999999999999996 7999999998632 1
Q ss_pred CCCCCCCCeEEeEEEEEEEEEccC--eeEEEeccCCCCeeeEEEEeEEEEecCCCCccceEEeeeec
Q 011615 372 GFDPKALPTVTGINYRDMVADNVT--QSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQG 436 (481)
Q Consensus 372 ~~~~~~~~~i~nItf~nI~~~~~~--~~~~l~g~~~~~~~~I~~~ni~i~~~~~~~~~~~~c~nv~g 436 (481)
...|...+.|+||+|+||+++... .++.|.|. +.||+||+|+||+++.. .....|.|+.+
T Consensus 284 ~~~p~~~~~i~~I~~~ni~gt~~~~~~~v~i~c~-~~~c~ni~~~nv~i~~~----~~~~~C~n~~~ 345 (349)
T 1hg8_A 284 TGKPTNGVKISNIKFIKVTGTVASSAQDWFILCG-DGSCSGFTFSGNAITGG----GKTSSCNYPTN 345 (349)
T ss_dssp CSCCCSSEEEEEEEEEEEEEEECTTSEEEEEECC-SSCEEEEEEESCEEECC----SSCCEECSSSS
T ss_pred CCcccCCceEEEEEEEeEEEEeCCCCEEEEEEeC-CCcCcCEEEEeEEEEcC----CCCeeeeCCCC
Confidence 223444579999999999998874 68999998 69999999999999853 23467887764
No 7
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=100.00 E-value=2.4e-56 Score=448.29 Aligned_cols=316 Identities=20% Similarity=0.291 Sum_probs=268.3
Q ss_pred chHHHHHHHHHHhhhcccCCCcEEEeCCCcceeeeE-EeccceeEEEccCcEEEecCCCCCCCCCCCCCCCCCCCCCCCC
Q 011615 71 SNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSF-NLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGG 149 (481)
Q Consensus 71 Ddt~Aiq~Ai~~a~~~~~~~g~~v~iP~G~Yl~~~i-~l~s~~~l~l~~ga~i~~~~~~~~~~~~~~~~~~~~g~~~~~~ 149 (481)
.||+|||+|+++|.+ .++++|+||+|+|+. | .|+++++|.++ +++.+. ...|.
T Consensus 6 ~dt~aiq~ai~~c~~---~~g~~v~vP~G~~~~--l~~l~~~~~l~~~--g~~~~~--~~~w~----------------- 59 (339)
T 2iq7_A 6 TDAAAAIKGKASCTS---IILNGIVVPAGTTLD--MTGLKSGTTVTFQ--GKTTFG--YKEWE----------------- 59 (339)
T ss_dssp SCHHHHHHHGGGCSE---EEEESCEECTTCCEE--ECSCCTTCEEEEE--SEEEEC--CCCSC-----------------
T ss_pred CCHHHHHHHHHHhhc---cCCCeEEECCCEEEE--eeccCCCeEEEEe--CcEEcc--ccccc-----------------
Confidence 479999999999875 467899999999973 4 56788888775 344432 23332
Q ss_pred CceeeEEEeceeceEEEcc-ceeeeCCCchhhhhccccCCCCCCCeeEEEEeeccEEEEeeEEeeCCCCeEEeeccccEE
Q 011615 150 RFSSLIFGTNLTDVVVTGG-NATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVL 228 (481)
Q Consensus 150 ~~~~~i~~~~~~ni~I~G~-~G~idG~g~~ww~~~~~~~~~~~rp~~i~~~~~~nv~I~g~~i~ns~~~~i~~~~~~nv~ 228 (481)
.+||.+.. +||+|+|. .|+|||+|+.||+..... ....||.+|.|.+|+|++|+|++++|+|+|++++..|+||+
T Consensus 60 --g~~i~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~-~~~~rp~~i~~~~~~nv~i~giti~nsp~~~i~i~~~~nv~ 135 (339)
T 2iq7_A 60 --GPLISFSG-TNININGASGHSIDCQGSRWWDSKGSN-GGKTKPKFFYAHSLKSSNIKGLNVLNTPVQAFSINSATTLG 135 (339)
T ss_dssp --CCSEEEEE-ESCEEEECTTCEEECCGGGTCCSCGGG-SSSCCCCCEEEEEEEEEEEECCEEECCSSCCEEEESCEEEE
T ss_pred --CcEEEEEc-ccEEEEcCCCCEEECCccccccccccc-CCCCCCeEEEEeeeCcEEEEEEEEEeCCcceEEEeccCCEE
Confidence 24777755 99999995 379999999999864332 25679999999999999999999999999999999999999
Q ss_pred EEeEEEECCCC----CCCCCCcCCCCCccEEEEecEEecCCceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceEE
Q 011615 229 IQGLTIRAPID----SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIA 304 (481)
Q Consensus 229 i~~~~i~~~~~----~~n~DGI~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gis 304 (481)
|++++|.++.. ++|+||||+.+|+||+|+||+|.++||||++++ .+||+|+||+|.+ +|||+
T Consensus 136 i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDciaiks------------g~nI~i~n~~~~~--ghGis 201 (339)
T 2iq7_A 136 VYDVIIDNSAGDSAGGHNTDAFDVGSSTGVYISGANVKNQDDCLAINS------------GTNITFTGGTCSG--GHGLS 201 (339)
T ss_dssp EESCEEECGGGGGTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESS------------EEEEEEESCEEES--SCCEE
T ss_pred EEEEEEECCccccccCCCCCcEEEcCcceEEEEecEEecCCCEEEEcC------------CccEEEEeEEEEC--CceEE
Confidence 99999999743 799999999999999999999999999999998 5999999999998 67999
Q ss_pred eccC---cCCCEEEEEEEeeEEEcCCceEEEEeecCCCceeecEEEEeeEEcccee-eEEEEcccCCCCCCCCCCCCCCe
Q 011615 305 LGSE---MSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDPGFDPKALPT 380 (481)
Q Consensus 305 IGs~---~~~~v~nI~v~n~~~~~~~~Gi~Ikt~~g~~g~v~nI~f~ni~~~~~~~-~i~i~~~y~~~~~~~~~~~~~~~ 380 (481)
|||+ ..+.++||+|+||+|.++.+|+|||+|++++|.|+||+|+||+|+++.+ ||.|++.|++.. ....|...+.
T Consensus 202 iGSlg~~~~~~v~nV~v~n~~~~~~~~girIkt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~-~~~~p~~~~~ 280 (339)
T 2iq7_A 202 IGSVGGRSDNTVKTVTISNSKIVNSDNGVRIKTVSGATGSVSGVTYSGITLSNIAKYGIVIEQDYENGS-PTGTPTNGVP 280 (339)
T ss_dssp EEEESSSSCCEEEEEEEEEEEEESCSEEEEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEEETTE-ECSCCCSSSC
T ss_pred ECcCCcccCCCEEEEEEEeeEEECCCcEEEEEEeCCCCeEEEEEEEEeEEccCcccccEEEEeecCCCC-CCCCCCCCce
Confidence 9994 3468999999999999999999999999988999999999999999976 999999997631 1223444579
Q ss_pred EEeEEEEEEEEEccC--eeEEEeccCCCCeeeEEEEeEEEEecCCCCccceEEeeeec
Q 011615 381 VTGINYRDMVADNVT--QSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQG 436 (481)
Q Consensus 381 i~nItf~nI~~~~~~--~~~~l~g~~~~~~~~I~~~ni~i~~~~~~~~~~~~c~nv~g 436 (481)
|+||+|+||+++... .++.|.|. +.||+||+|+||+++.. ...+.|.|+..
T Consensus 281 i~ni~~~ni~gt~~~~~~~~~i~c~-~~~c~ni~~~nv~i~~~----~~~~~C~n~~~ 333 (339)
T 2iq7_A 281 ITGLTLSKITGSVASSGTNVYILCA-SGACSNWKWSGVSVTGG----KKSTKCSNIPS 333 (339)
T ss_dssp EEEEEEEEEEEEECTTSEEEEEECC-TTCEEEEEEEEEEEESS----BCCSCCBCCCT
T ss_pred EEEEEEEeEEEEeCCCCEEEEEEeC-CCcEecEEEEeEEEEcC----CCcccccCCCC
Confidence 999999999999875 78999995 89999999999999852 23567888763
No 8
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=2.1e-56 Score=448.13 Aligned_cols=316 Identities=21% Similarity=0.279 Sum_probs=266.9
Q ss_pred cchHHHHHHHHHHhhhcccCCCcEEEeCCCcceeeeE-EeccceeEEEccCcEEEecCCCCCCCCCCCCCCCCCCCCCCC
Q 011615 70 TSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSF-NLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPG 148 (481)
Q Consensus 70 tDdt~Aiq~Ai~~a~~~~~~~g~~v~iP~G~Yl~~~i-~l~s~~~l~l~~ga~i~~~~~~~~~~~~~~~~~~~~g~~~~~ 148 (481)
..||+|||+|+++|.+ .++++|+||+|+|+. | .|+++++|.++ +++.+. ...|.
T Consensus 5 ~~~t~aiq~ai~~c~~---~gg~~v~vP~G~~~~--l~~l~~~~~l~~~--g~~~~~--~~~w~---------------- 59 (336)
T 1nhc_A 5 FTSASEASESISSCSD---VVLSSIEVPAGETLD--LSDAADGSTITFE--GTTSFG--YKEWK---------------- 59 (336)
T ss_dssp ESSHHHHHHHGGGCSE---EEEESCEECTTCCEE--CTTCCTTCEEEEE--SEEEEC--CCCSC----------------
T ss_pred ECCHHHHHHHHHHhhc---cCCCeEEECCCEEEE--eeccCCCeEEEEe--ceEEcc--ccccc----------------
Confidence 3579999999999875 467899999999972 4 55777777664 444432 23332
Q ss_pred CCceeeEEEeceeceEEEcc-ceeeeCCCchhhhhccccCCCCCCCeeEEEEeeccEEEEeeEEeeCCCCeEEeeccccE
Q 011615 149 GRFSSLIFGTNLTDVVVTGG-NATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNV 227 (481)
Q Consensus 149 ~~~~~~i~~~~~~ni~I~G~-~G~idG~g~~ww~~~~~~~~~~~rp~~i~~~~~~nv~I~g~~i~ns~~~~i~~~~~~nv 227 (481)
.+|+.+. .+||+|+|. .|+|||+|+.||+..... ....||.+|.|.+|+|++|+|++++|+|.|++++. |+|+
T Consensus 60 ---g~li~~~-~~nv~I~G~~gG~IdG~G~~~w~~~~~~-~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~-~~nv 133 (336)
T 1nhc_A 60 ---GPLIRFG-GKDLTVTMADGAVIDGDGSRWWDSKGTN-GGKTKPKFMYIHDVEDSTFKGINIKNTPVQAISVQ-ATNV 133 (336)
T ss_dssp ---CCSEECC-EESCEEEECTTCEEECCGGGTCCSCTTT-SSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEE-EEEE
T ss_pred ---CcEEEEe-cCCEEEEcCCCeEEECCccccccccCcC-CCCCCceEEEEeeeCcEEEEEEEEEeCCccEEEEE-eCCE
Confidence 2467664 599999995 379999999999854322 25678999999999999999999999999999999 9999
Q ss_pred EEEeEEEECCCC----CCCCCCcCCCCCccEEEEecEEecCCceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceE
Q 011615 228 LIQGLTIRAPID----SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAI 303 (481)
Q Consensus 228 ~i~~~~i~~~~~----~~n~DGI~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi 303 (481)
+|++++|.++.. ++|+||||+.+|+||+|+||+|.++||||++++ .+||+|+||+|++ +|||
T Consensus 134 ~i~~~~I~~~~~d~~~~~ntDGidi~~s~nV~I~n~~i~~gDDciaiks------------g~nI~i~n~~~~~--ghGi 199 (336)
T 1nhc_A 134 HLNDFTIDNSDGDDNGGHNTDGFDISESTGVYISGATVKNQDDCIAINS------------GESISFTGGTCSG--GHGL 199 (336)
T ss_dssp EEESCEEECTTHHHHTCCSCCSEEECSCEEEEEESCEEESSSEEEEESS------------EEEEEEESCEEES--SSEE
T ss_pred EEEEEEEECCCcccccCCCCCcEEecCCCeEEEEeCEEEcCCCEEEEeC------------CeEEEEEeEEEEC--CcCc
Confidence 999999999853 799999999999999999999999999999998 4999999999998 6799
Q ss_pred EeccCc---CCCEEEEEEEeeEEEcCCceEEEEeecCCCceeecEEEEeeEEcccee-eEEEEcccCCCCCCCCCCCCCC
Q 011615 304 ALGSEM---SGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDPGFDPKALP 379 (481)
Q Consensus 304 sIGs~~---~~~v~nI~v~n~~~~~~~~Gi~Ikt~~g~~g~v~nI~f~ni~~~~~~~-~i~i~~~y~~~~~~~~~~~~~~ 379 (481)
+|||+. .+.++||+|+||+|.++.+|+|||+|++++|.|+||+|+||+|+++.+ ||.|++.|++.. ....|...+
T Consensus 200 siGS~g~~~~~~v~nV~v~n~~~~~t~~girIkt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~-~~~~p~~~~ 278 (336)
T 1nhc_A 200 SIGSVGGRDDNTVKNVTISDSTVSNSANGVRIKTIYKETGDVSEITYSNIQLSGITDYGIVIEQDYENGS-PTGTPSTGI 278 (336)
T ss_dssp EEEEESSSSCCEEEEEEEEEEEEESCSEEEEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEEETTE-ECSCCCSSS
T ss_pred eEccCccccCCCEEEEEEEeeEEECCCcEEEEEEECCCCCEEeeeEEeeEEeeccccccEEEEeecCCCC-CCCCCCCCc
Confidence 999963 368999999999999999999999999989999999999999999975 999999997632 122344457
Q ss_pred eEEeEEEEEEEEEccC--eeEEEeccCCCCeeeEEEEeEEEEecCCCCccceEEeeeec
Q 011615 380 TVTGINYRDMVADNVT--QSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQG 436 (481)
Q Consensus 380 ~i~nItf~nI~~~~~~--~~~~l~g~~~~~~~~I~~~ni~i~~~~~~~~~~~~c~nv~g 436 (481)
.|+||+|+||+++... .++.|.|. ..||+||+|+||+++.. ...+.|.|+.+
T Consensus 279 ~i~~i~~~ni~gt~~~~~~~v~i~c~-~~~c~ni~~~nv~i~~~----~~~~~C~n~~~ 332 (336)
T 1nhc_A 279 PITDVTVDGVTGTLEDDATQVYILCG-DGSCSDWTWSGVDLSGG----KTSDKCENVPS 332 (336)
T ss_dssp CEEEEEEEEEEEEECTTCEEEEEECC-TTCEEEEEEEEEEEESS----BCCSCCBSCCT
T ss_pred eEEEEEEEeEEEEeCCCCEEEEEEcC-CCcEecEEEEeEEEEcC----CCCcccCCCCC
Confidence 9999999999999875 78999994 89999999999999852 23567888764
No 9
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=100.00 E-value=1.1e-55 Score=443.08 Aligned_cols=313 Identities=22% Similarity=0.323 Sum_probs=266.6
Q ss_pred hHHHHHHHHHHhhhcccCCCcEEEeCCCcceeeeE-EeccceeEEEccCcEEEecCCCCCCCCCCCCCCCCCCCCCCCCC
Q 011615 72 NTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSF-NLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGR 150 (481)
Q Consensus 72 dt~Aiq~Ai~~a~~~~~~~g~~v~iP~G~Yl~~~i-~l~s~~~l~l~~ga~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 150 (481)
-++|||+|+++|.+ .++++|+||+|+|+. | .|+++++|.++ +++.+. ...|.
T Consensus 11 g~~aiq~ai~~c~~---~gg~~v~vP~G~~l~--l~~l~~~~~l~~~--g~~~~~--~~~w~------------------ 63 (339)
T 1ia5_A 11 GASSASKSKTSCST---IVLSNVAVPSGTTLD--LTKLNDGTHVIFS--GETTFG--YKEWS------------------ 63 (339)
T ss_dssp HHHHHHHHGGGCSE---EEEESCEECTTCCEE--ECSCCTTCEEEEE--SEEEEC--CCCSC------------------
T ss_pred chHHHHHHHHHhhc---cCCCeEEECCCEEEE--eeccCCCeEEEEe--CcEEcc--ccccc------------------
Confidence 36799999999875 467899999999973 4 67888888875 345442 23332
Q ss_pred ceeeEEEeceeceEEEcc-ceeeeCCCchhhhhccccCCCCCCCeeEEEEeeccEEEEeeEEeeCCCCeEEeeccccEEE
Q 011615 151 FSSLIFGTNLTDVVVTGG-NATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLI 229 (481)
Q Consensus 151 ~~~~i~~~~~~ni~I~G~-~G~idG~g~~ww~~~~~~~~~~~rp~~i~~~~~~nv~I~g~~i~ns~~~~i~~~~~~nv~i 229 (481)
.+||.+.. +||+|+|. +|+|||+|+.||+..... ....||.+|.|.+|+|++|+|++++|+|.|++++..|+||+|
T Consensus 64 -g~li~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~-~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~~~~nv~i 140 (339)
T 1ia5_A 64 -GPLISVSG-SDLTITGASGHSINGDGSRWWDGEGGN-GGKTKPKFFAAHSLTNSVISGLKIVNSPVQVFSVAGSDYLTL 140 (339)
T ss_dssp -CCSEEEEE-ESCEEEECTTCEEECCGGGTCSSCTTT-SSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEESCEEEEE
T ss_pred -CcEEEEEc-CcEEEEcCCCeEEeCCCCccccccccC-CCCCCCeEEEEeecCcEEEEEEEEEcCCcceEEEecccCeEE
Confidence 24777755 99999995 379999999999864322 256799999999999999999999999999999999999999
Q ss_pred EeEEEECCCC----CCCCCCcCCCCCccEEEEecEEecCCceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEe
Q 011615 230 QGLTIRAPID----SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305 (481)
Q Consensus 230 ~~~~i~~~~~----~~n~DGI~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisI 305 (481)
++++|.++.+ ++|+||||+.+|+||+|+||+|.++||||++++ .+||+|+||+|.+ +|||+|
T Consensus 141 ~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDcIaiks------------g~nI~i~n~~~~~--ghGisi 206 (339)
T 1ia5_A 141 KDITIDNSDGDDNGGHNTDAFDIGTSTYVTISGATVYNQDDCVAVNS------------GENIYFSGGYCSG--GHGLSI 206 (339)
T ss_dssp ESCEEECGGGTTTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESS------------EEEEEEESCEEES--SSCEEE
T ss_pred eeEEEECCccccccCCCCCcEEecCCceEEEEeeEEEcCCCeEEEeC------------CeEEEEEeEEEEC--CceEEE
Confidence 9999999743 799999999999999999999999999999998 4999999999998 679999
Q ss_pred ccCc---CCCEEEEEEEeeEEEcCCceEEEEeecCCCceeecEEEEeeEEcccee-eEEEEcccCCCCCCCCCCCCCCeE
Q 011615 306 GSEM---SGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY-VFWMTGDYGSHPDPGFDPKALPTV 381 (481)
Q Consensus 306 Gs~~---~~~v~nI~v~n~~~~~~~~Gi~Ikt~~g~~g~v~nI~f~ni~~~~~~~-~i~i~~~y~~~~~~~~~~~~~~~i 381 (481)
||+. .+.++||+|+||+|.++.+|+|||+|++++|.|+||+|+||+|+++.+ ||.|++.|.. + ...|...+.|
T Consensus 207 GS~g~~~~~~v~nV~v~n~~~~~t~~girIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~-~--~~~p~~~~~i 283 (339)
T 1ia5_A 207 GSVGGRSDNTVKNVTFVDSTIINSDNGVRIKTNIDTTGSVSDVTYKDITLTSIAKYGIVVQQNYGD-T--SSTPTTGVPI 283 (339)
T ss_dssp EEECSSSCCEEEEEEEEEEEEESCSEEEEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEETC-T--TSCCCSSSCE
T ss_pred CcCCcccCCCEEEEEEEeeEEECCCcEEEEEEeCCCCcEEEeeEEEEEEEECcccccEEEEccCCC-C--CCCCcCCceE
Confidence 9953 367999999999999999999999999989999999999999999976 9999999932 2 1234445799
Q ss_pred EeEEEEEEEEEccC--eeEEEeccCCCCeeeEEEEeEEEEecCCCCccceEEeeeec
Q 011615 382 TGINYRDMVADNVT--QSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQG 436 (481)
Q Consensus 382 ~nItf~nI~~~~~~--~~~~l~g~~~~~~~~I~~~ni~i~~~~~~~~~~~~c~nv~g 436 (481)
+||+|+||+++... .++.|.|. ..||+||+|+||+++.. ...+.|.|+..
T Consensus 284 ~ni~~~ni~gt~~~~~~~v~i~c~-~~~c~ni~~~nv~i~~~----~~~~~C~n~~~ 335 (339)
T 1ia5_A 284 TDFVLDNVHGSVVSSGTNILISCG-SGSCSDWTWTDVSVSGG----KTSSKCTNVPS 335 (339)
T ss_dssp EEEEEEEEEEEECTTSEEEEEECC-TTCEEEEEEEEEEEESS----BCCSCCBSCCT
T ss_pred EEEEEEeEEEEeCCCCEEEEEEeC-CCCEecEEEEeEEEECC----CCCeeeECCCC
Confidence 99999999999875 78999995 89999999999999852 24567888763
No 10
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=100.00 E-value=6e-56 Score=443.36 Aligned_cols=307 Identities=16% Similarity=0.203 Sum_probs=261.2
Q ss_pred HHHHHHHHHHhhhcccCCCcEEEeCCCcceeeeEEeccceeEEEccCcEEEecCCCCCCCCCCCCCCCCCCCCCCCCCce
Q 011615 73 TKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFS 152 (481)
Q Consensus 73 t~Aiq~Ai~~a~~~~~~~g~~v~iP~G~Yl~~~i~l~s~~~l~l~~ga~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 152 (481)
++|||+ +++|.+ .++++|+||+|+|+ .|.|+++++|.++ +++.+. ...|. .
T Consensus 8 ~~aiq~-i~aC~~---~gg~~v~vP~G~~l--~l~l~~~~~l~~~--g~~~~~--~~~w~-------------------~ 58 (335)
T 1k5c_A 8 VDDAKD-IAGCSA---VTLNGFTVPAGNTL--VLNPDKGATVTMA--GDITFA--KTTLD-------------------G 58 (335)
T ss_dssp TTGGGG-CTTCSE---EEECCEEECTTCCE--EECCCTTCEEEEC--SCEEEC--CCCSC-------------------S
T ss_pred HHHhHH-HHhccc---CCCCEEEECCCEEE--EEEeCCCeEEEEe--ccEecc--ccccc-------------------C
Confidence 689999 888865 56889999999998 4677888888775 445542 23342 2
Q ss_pred eeEEEeceeceEEEc-cceeeeCCCchhhhhccccCCCCCCCeeEEEEeeccEEEEeeEEeeCCCCeEEeecccc-EEEE
Q 011615 153 SLIFGTNLTDVVVTG-GNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSN-VLIQ 230 (481)
Q Consensus 153 ~~i~~~~~~ni~I~G-~~G~idG~g~~ww~~~~~~~~~~~rp~~i~~~~~~nv~I~g~~i~ns~~~~i~~~~~~n-v~i~ 230 (481)
+||.+. .+||+|+| . |+|||+|+.||+..... ....||++|.|..|+ ++|+|++++|+|+|++++..|+| |+|+
T Consensus 59 ~~i~~~-~~ni~I~G~~-G~idG~G~~ww~~~~~~-~~~~rP~~i~~~~~~-v~i~giti~nsp~~~i~i~~~~n~v~i~ 134 (335)
T 1k5c_A 59 PLFTID-GTGINFVGAD-HIFDGNGALYWDGKGTN-NGTHKPHPFLKIKGS-GTYKKFEVLNSPAQAISVGPTDAHLTLD 134 (335)
T ss_dssp CSEEEE-EEEEEEECTT-CEEECCGGGTCCSCTTT-SSSCCCCCSEEEEEE-EEEESCEEESCSSCCEEEEEEEEEEEEE
T ss_pred cEEEEE-ccCEEEEeCc-cEEcCChhHhhhccccc-CCCCCCeEEEEeceE-EEEEEEEEECCCcceEEEEccCCeEEEE
Confidence 477776 59999999 5 99999999999864332 256799999999999 99999999999999999999999 9999
Q ss_pred eEEEECCCC-----CCCCCCcCCCCCccEEEEecEEecCCceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEe
Q 011615 231 GLTIRAPID-----SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL 305 (481)
Q Consensus 231 ~~~i~~~~~-----~~n~DGI~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisI 305 (481)
+++|.++.+ ++|+||||+ +|+||+|+||+|.++||||+||+ .+||+|+||+|.+ +|||+|
T Consensus 135 ~v~I~~~~~d~~~~~~NtDGidi-~s~nV~I~n~~i~~gDDcIaiks------------g~nI~i~n~~~~~--ghGisI 199 (335)
T 1k5c_A 135 GITVDDFAGDTKNLGHNTDGFDV-SANNVTIQNCIVKNQDDCIAIND------------GNNIRFENNQCSG--GHGISI 199 (335)
T ss_dssp SCEEECGGGGGGGCCCSCCSEEE-ECSSEEEESCEEESSSCSEEEEE------------EEEEEEESCEEES--SCCEEE
T ss_pred EEEEECCCCcccccCCCCCeEcc-cCCeEEEEeeEEEcCCCEEEeeC------------CeeEEEEEEEEEC--CccCeE
Confidence 999999853 799999999 99999999999999999999998 4899999999998 679999
Q ss_pred ccCc-CCCEEEEEEEeeEEEcCCceEEEEeecCCC-ceeecEEEEeeEEccce-eeEEEEcccCCCCCCCCCCCCCCeEE
Q 011615 306 GSEM-SGGIKDVRAEDITAINTQSGVRIKTAVGRG-AYVKEIYVRRMTMKTMK-YVFWMTGDYGSHPDPGFDPKALPTVT 382 (481)
Q Consensus 306 Gs~~-~~~v~nI~v~n~~~~~~~~Gi~Ikt~~g~~-g~v~nI~f~ni~~~~~~-~~i~i~~~y~~~~~~~~~~~~~~~i~ 382 (481)
||+. .+.++||+|+||+|.++.+|+|||+|++++ |.|+||+|+||+|+++. +||.|++.|.. + ...|...+.|+
T Consensus 200 GS~g~~~~v~nV~v~n~~~~~t~~girIKt~~g~~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~-~--~~~p~~~~~i~ 276 (335)
T 1k5c_A 200 GSIATGKHVSNVVIKGNTVTRSMYGVRIKAQRTATSASVSGVTYDANTISGIAKYGVLISQSYPD-D--VGNPGTGAPFS 276 (335)
T ss_dssp EEECTTCEEEEEEEESCEEEEEEEEEEEEEETTCCSCEEEEEEEESCEEEEEEEEEEEEEEEETS-S--SSSCCSSSCEE
T ss_pred eeccCCCCEEEEEEEeeEEECCCceEEEEEeCCCCcceEeeeEEEEEEEEccccccEEEEeeCCC-C--CCCCCCCceEE
Confidence 9997 689999999999999999999999999988 99999999999999997 79999999942 2 12344457999
Q ss_pred eEEEEEEE--EEcc--CeeEEEeccCCCCeeeEEEEeEEEEecCCCCccceEEeeee
Q 011615 383 GINYRDMV--ADNV--TQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQ 435 (481)
Q Consensus 383 nItf~nI~--~~~~--~~~~~l~g~~~~~~~~I~~~ni~i~~~~~~~~~~~~c~nv~ 435 (481)
||+|+||+ ++.. ..++.|.|++ ||+||+|+||+++..+ .....|.++.
T Consensus 277 nI~~~nI~~~Gt~~~~~~~i~i~c~~--~c~ni~~~nv~i~~~~---~~~~~~~~~~ 328 (335)
T 1k5c_A 277 DVNFTGGATTIKVNNAATRVTVECGN--CSGNWNWSQLTVTGGK---AGTIKSDKAK 328 (335)
T ss_dssp EEEECSSCEEEEECTTCEEEEEECSS--EESEEEEEEEEEESSB---CCCEECTTCE
T ss_pred EEEEEEEEEeeEEcCCceEEEEECCC--cCCCEEEEeEEEEcCC---CCceEeEEeE
Confidence 99999999 7665 4689999976 9999999999998752 3345555554
No 11
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=100.00 E-value=2.5e-51 Score=426.13 Aligned_cols=300 Identities=15% Similarity=0.178 Sum_probs=252.0
Q ss_pred ceEEEEeecCccCCCccchHHHHHHHHHHhhhcccCCCcEEEeCCC-ccee------------eeEEeccceeEEEccCc
Q 011615 54 KHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPG-KWLT------------GSFNLTSHFTLYIHKDA 120 (481)
Q Consensus 54 ~~~~nV~dyGA~gDG~tDdt~Aiq~Ai~~a~~~~~~~g~~v~iP~G-~Yl~------------~~i~l~s~~~l~l~~ga 120 (481)
+.++||+||||+|| ||+|||+||++|++ .++++|+||+| +|++ ++|.|+|+++|+|+.
T Consensus 49 ~~~~nV~dfGA~gD----dT~AIqkAIdaCs~---~GGgtV~VPaG~tYLt~sv~~gp~~~~sGpI~LkSnVtL~LdG-- 119 (600)
T 2x6w_A 49 DPSGNVIQPGPNVD----SRQYLQAAIDYVSS---NGGGTITIPAGYTWYLGSYGVGGIAGHSGIIQLRSNVNLNIEG-- 119 (600)
T ss_dssp CTTSCBCCCCTTCC----CHHHHHHHHHHHHH---TTCEEEEECTTCEEEECSCCCGGGGGGTEEEECCTTEEEEECS--
T ss_pred CcEEeeecCCCCcc----CHHHHHHHHHHhhh---cCCCEEEECCCCEEEecccccccccccccceEEcCceEEeeec--
Confidence 46899999999998 99999999999876 68899999999 9999 999999999999865
Q ss_pred EEEecCCCCCCCCCCCCCCCCCCCCCCCCCceeeEEEeceeceEEEccceeeeCCCchhhhhccccCCCCCCCeeEEEEe
Q 011615 121 LLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMF 200 (481)
Q Consensus 121 ~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~ni~I~G~~G~idG~g~~ww~~~~~~~~~~~rp~~i~~~~ 200 (481)
+|+++.++++|+...+.. .++.++|.+.+++||+|+|. |+|||+|+.||+... ....||. +.|.+
T Consensus 120 tL~as~d~~~yp~~~~v~----------~~w~slI~~~~~~NItItG~-GtIDGqG~~wW~~~~---~~~~RP~-l~f~~ 184 (600)
T 2x6w_A 120 RIHLSPFFDLKPFQVFVG----------FDNGDPASSGNLENCHIYGH-GVVDFGGYEFGASSQ---LRNGVAF-GRSYN 184 (600)
T ss_dssp EEEECGGGTTSCEEEEEC----------CSSSSGGGCCCEEEEEEESS-CEEECTTCCCSSTTC---CEEEEEC-CSEEE
T ss_pred EEEEcCChHHCccccccc----------ccccceEEEecceeEEEecc-eeeeCCccccccccc---cCCCCCE-EEEee
Confidence 999999999996421000 12345688899999999996 999999999996321 1124677 88999
Q ss_pred eccEEEEeeEEeeC-CCCeEEe---eccccEEEEeEE----EECCCCCCCCCCcCCCCCccEEEEecEEecCCceeee-c
Q 011615 201 SDNVQISNLTLIDS-PSWNVHP---VYSSNVLIQGLT----IRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAV-K 271 (481)
Q Consensus 201 ~~nv~I~g~~i~ns-~~~~i~~---~~~~nv~i~~~~----i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gDD~iai-~ 271 (481)
|+ |+|++++|+ |.|++++ ..|+||+|+|++ |.+ ++|+||| |+|+||+|.+|||||+| |
T Consensus 185 c~---I~GITi~NSDP~w~I~iG~~~~c~NVtI~nvtfi~aI~s---spNTDGI-------V~I~nc~I~tGDDCIAI~K 251 (600)
T 2x6w_A 185 CS---VTGITFQNGDVTWAITLGWNGYGSNCYVRKCRFINLVNS---SVNADHS-------TVYVNCPYSGVESCYFSMS 251 (600)
T ss_dssp EE---EESCEEESCCCSCSEEECBTTBEEEEEEESCEEECCCCC---SSCCCEE-------EEEECSSSEEEESCEEECC
T ss_pred eE---EeCeEEECCCCccEEEeCCCCCcccEEEeCeEEcceEec---CCCCCEE-------EEEEeeEEecCCcEEEEec
Confidence 98 999999999 9999999 999999999999 776 7999999 99999999999999999 9
Q ss_pred CCCCccCcccCCceeeEEEEEEEEeCCCCceEEeccCcCCCEEEEEEEeeEEEcCCceEEEEeecCCCceeecEEEEeeE
Q 011615 272 SGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMT 351 (481)
Q Consensus 272 sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~~~~v~nI~v~n~~~~~~~~Gi~Ikt~~g~~g~v~nI~f~ni~ 351 (481)
+++ ..++.++ +|.++ ++||+|||++.+.++||+|+| +||++.+++|.|+||+|+||+
T Consensus 252 SGs----------~~ni~~e--~~~~G-HgGISIGSe~~ggV~NV~V~N----------rIKt~~G~GG~V~NItfeNI~ 308 (600)
T 2x6w_A 252 SSF----------ARNIACS--VQLHQ-HDTFYRGSTVNGYCRGAYVVM----------HAAEAAGAGSYAYNMQVENNI 308 (600)
T ss_dssp CTT----------HHHHEEE--EEECS-SSEEEESCEEEEESEEEEEEE----------CGGGCTTTCSEEEEEEEESCE
T ss_pred CCC----------cCCeEEE--EEcCC-CCcEEecccccCcEEEEEEEE----------EEEeecCCCceEEEEEEEEEE
Confidence 983 2456666 56663 459999999888999999999 778888889999999999999
Q ss_pred EccceeeEEEEcccCCCCCCCCCCCCCCeEEeEEEEEEEEEccCe-------eEEEeccCC-------CCeeeEEEEeEE
Q 011615 352 MKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQ-------SAKLDGIRN-------DPFTGICISNVT 417 (481)
Q Consensus 352 ~~~~~~~i~i~~~y~~~~~~~~~~~~~~~i~nItf~nI~~~~~~~-------~~~l~g~~~-------~~~~~I~~~ni~ 417 (481)
|+++..+|.+++.+. ....+.|+||+|+||+++.... +..+.+.++ .+|++|+|+|++
T Consensus 309 m~nV~~~I~i~q~~~--------~~s~~~IsnItfkNItgTsas~aav~~~~g~~i~g~p~~~~~~~~~~Ie~V~~~~~~ 380 (600)
T 2x6w_A 309 AVIYGQFVILGSDVT--------ATVSGHLNDVIVSGNIVSIGERAAFSAPFGAFIDIGPDNSGASNVQDIQRVLVTGNS 380 (600)
T ss_dssp EEESSEEEEEEECBC--------SSCBCEEEEEEEESCEEEECSCCTTSSSCEEEEEECCCTTCCSSSCCEEEEEEESCE
T ss_pred EEccceEEEeCCCCC--------CCCCceEEEEEEEeEEEEeccccccccccceEEEecCcccccccccceeEEEEeceE
Confidence 999999998887521 2234799999999999997532 256666654 689999999999
Q ss_pred EEec
Q 011615 418 IKLT 421 (481)
Q Consensus 418 i~~~ 421 (481)
+...
T Consensus 381 ~~~~ 384 (600)
T 2x6w_A 381 FYAP 384 (600)
T ss_dssp EECC
T ss_pred EEcC
Confidence 9653
No 12
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=100.00 E-value=1.9e-44 Score=380.61 Aligned_cols=309 Identities=12% Similarity=0.142 Sum_probs=247.8
Q ss_pred EEEeecCccCCCccchHHHHHHHHHHhhhccc-----------------------CCCcEEEeCCCccee---eeEEecc
Q 011615 57 AVLTDFGGVGDGKTSNTKAFNTAISNLSKYAA-----------------------DGGAQLIVPPGKWLT---GSFNLTS 110 (481)
Q Consensus 57 ~nV~dyGA~gDG~tDdt~Aiq~Ai~~a~~~~~-----------------------~~g~~v~iP~G~Yl~---~~i~l~s 110 (481)
||...|||++||.+|.+.+|. +|..+++... .++++|+||+|+|++ ++|.|+|
T Consensus 143 ~n~~~~~~~~dg~~~~~~~l~-ifa~p~~~~~~~P~~~~~~~~~~~~g~~~~~~~~ggg~v~vP~G~yl~g~~G~i~l~s 221 (549)
T 1x0c_A 143 FDDDLISLAPSGARQPENALL-IFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTSASTVVFNPGVYYFTGHDHMVLSS 221 (549)
T ss_dssp EGGGEEEETTTTEEEESEEEE-EEEECCCCTTTSCCTTCSSEECCCSEECCCTTTCCCSEEEECSEEEECCTTCCEEECT
T ss_pred ECCccccccccCcCCCcceEE-EEcCChhhccCCCCcCCCCceeeccccccccccCCCCEEEECCeEEecCCceEEEecC
Confidence 333479999999999999888 5555443211 368999999999996 5899999
Q ss_pred cee-EEEccCcEEEecCCCCCCCCCCCCCCCCCCCCCCCCCceeeEEEeceeceEEEccceeeeCCCchhhhhcccc--C
Q 011615 111 HFT-LYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKK--Q 187 (481)
Q Consensus 111 ~~~-l~l~~ga~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~ni~I~G~~G~idG~g~~ww~~~~~~--~ 187 (481)
+++ |+++.|+.|+++ +++..+++||+|+|. |+|||+|..||...... .
T Consensus 222 ~~~~L~l~~GA~L~gs----------------------------~~~~~~~~nv~ItG~-GtIDG~G~~ww~~~~~~~~~ 272 (549)
T 1x0c_A 222 SVTWVYFAPGAYVKGA----------------------------VEFLSTASEVKASGH-GVLSGEQYVWYADPDEGYQK 272 (549)
T ss_dssp TCCEEEECTTEEEESC----------------------------EEECCCSSEEEEESS-CEEECTTSCTTEEGGGTTEE
T ss_pred CCCeEecCCCCEEEEE----------------------------EEEecCceeEEEEee-EEEECCCceecccCcccccc
Confidence 999 999999998742 233348899999996 99999999999532111 0
Q ss_pred CCCCCCeeEEE------EeeccEEEEeeEEeeCCCCeEEee-cc-cc--EEEEeEEEECCCCCCCCCCcCCCCCccEEEE
Q 011615 188 FNVTRPYLIEV------MFSDNVQISNLTLIDSPSWNVHPV-YS-SN--VLIQGLTIRAPIDSPNTDGINPDSCTNTRIE 257 (481)
Q Consensus 188 ~~~~rp~~i~~------~~~~nv~I~g~~i~ns~~~~i~~~-~~-~n--v~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~ 257 (481)
....||.+|.| .+|+|++|+|++++|+|+|++++. .| ++ ++|+++++.++. .+|+||||+. +||+|+
T Consensus 273 ~~~~rp~~i~~~~~~~~~~c~nV~I~Giti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~~-~~NTDGidi~--~nV~I~ 349 (549)
T 1x0c_A 273 ASGANNNGLRMWRGTLGNSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAF-YGQTDGLEMY--PGTILQ 349 (549)
T ss_dssp CGGGCSCCCCSEEEECCSSCEEEEEESCEEECCSSCSEEEECSCGGGEEEEEEEEEEECCC-BTTCCCCBCC--TTCEEE
T ss_pred cccCCCceEEEeeccccCCceEEEEECcEEECCCceeEEeeccCCCCCeEEEEeeEeEcCC-CCCCCccccc--CCEEEE
Confidence 12237888888 999999999999999999999966 56 69 999999999854 4789999998 999999
Q ss_pred ecEEecCCceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCce-EEeccCcCCCEEEEEEEeeEEEcCCc------eE
Q 011615 258 DNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAA-IALGSEMSGGIKDVRAEDITAINTQS------GV 330 (481)
Q Consensus 258 n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~g-isIGs~~~~~v~nI~v~n~~~~~~~~------Gi 330 (481)
||+|.++||||+|++ +||+|+||+|+.+++++ |+|||. .+.++||+|+||+|.++.. |.
T Consensus 350 n~~i~~gDDcIaIks-------------~NI~I~n~~~~~~~g~~~IsiGs~-~~~V~NV~v~n~~i~~s~~~k~~~~g~ 415 (549)
T 1x0c_A 350 DVFYHTDDDGLKMYY-------------SNVTARNIVMWKESVAPVVEFGWT-PRNTENVLFDNVDVIHQAYANAGNNPG 415 (549)
T ss_dssp EEEEEESSCCEECCS-------------SSEEEEEEEEEECSSSCSEECCBS-CCCEEEEEEEEEEEEECCCCSGGGCCC
T ss_pred eeEEeCCCCEEEECC-------------CCEEEEeeEEEcCCCCceEEECCC-CCcEEEEEEEeeEEECccccccccceE
Confidence 999999999999985 89999999999766778 999995 6789999999999999864 55
Q ss_pred EEEe---ec-C------C-CceeecEEEEeeEEccce-eeEEEEcccCCCCCCCCCCCCCCeEEeEEEEEEEEEccC---
Q 011615 331 RIKT---AV-G------R-GAYVKEIYVRRMTMKTMK-YVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVT--- 395 (481)
Q Consensus 331 ~Ikt---~~-g------~-~g~v~nI~f~ni~~~~~~-~~i~i~~~y~~~~~~~~~~~~~~~i~nItf~nI~~~~~~--- 395 (481)
+|++ |. + + +|.|+||+|+||+|+++. +++.+...+. .....|+||+|+||+++...
T Consensus 416 iI~~~~~~~~g~~~~~~d~~G~i~nI~f~NI~i~nv~~~g~~~~~~~g---------~pg~~I~nI~i~NI~i~~~~~~~ 486 (549)
T 1x0c_A 416 IFGAVNNYLYAPDGLSSNHSTGNSNMTVRNITWSNFRAEGSSSALFRI---------NPIQNLDNISIKNVSIESFEPLS 486 (549)
T ss_dssp SEEECCBTTTCTTSCCSCCCCBEEEEEEEEEEEEEEEEEEEECCSEEE---------CCSEEEEEEEEEEEEEEEECCGG
T ss_pred EEecccccccCccccCcCCCceEccEEEEeEEEEeEEEeceEEeeecC---------CCCCcCccEEEEEEEEEcccccc
Confidence 6887 21 2 2 689999999999999987 7776544421 11236999999999977654
Q ss_pred ---eeEEEeccCC------CCeeeEEEEeEEEEec
Q 011615 396 ---QSAKLDGIRN------DPFTGICISNVTIKLT 421 (481)
Q Consensus 396 ---~~~~l~g~~~------~~~~~I~~~ni~i~~~ 421 (481)
.+..+.|.+. .+|+||+|+||++...
T Consensus 487 ~~~~~~~i~G~~~~~~~~~~~v~nI~f~NV~i~G~ 521 (549)
T 1x0c_A 487 INTTESWMPVWYDLNNGKQITVTDFSIEGFTVGNT 521 (549)
T ss_dssp GTCSCEEECCCBBTTTCCBCCEEEEEEEEEEETTE
T ss_pred ccccceEEeCCCccccccceeeeeEEEEeEEEeCe
Confidence 2455666543 7899999999999653
No 13
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=100.00 E-value=1.1e-41 Score=359.22 Aligned_cols=269 Identities=15% Similarity=0.150 Sum_probs=223.1
Q ss_pred CCCcEEEeCCCccee-------------eeEEecccee-EEEccCcEEEecCCCCCCCCCCCCCCCCCCCCCCCCCceee
Q 011615 89 DGGAQLIVPPGKWLT-------------GSFNLTSHFT-LYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPGGRFSSL 154 (481)
Q Consensus 89 ~~g~~v~iP~G~Yl~-------------~~i~l~s~~~-l~l~~ga~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 154 (481)
.++++||||+|+|++ ++|.|+|+++ |+|+.||+|++ +
T Consensus 229 ~ggg~v~vP~G~yl~~~~~~~gpc~~g~G~i~lkSnvt~L~L~~GA~l~g-----------------------------~ 279 (574)
T 1ogo_X 229 GAKSILYFPPGVYWMNQDQSGNSGKLGSNHIRLNSNTYWVYLAPGAYVKG-----------------------------A 279 (574)
T ss_dssp CSSSEEEECSEEEEECBCTTCCBSCSSSCCEECCTTCCEEEECTTEEEES-----------------------------C
T ss_pred CCCCEEEECCcEEEEeccccCCcccccceEEEecCCCceEEecCCcEEEc-----------------------------c
Confidence 478999999999999 6799999999 99999999863 3
Q ss_pred EEEeceeceEEEccceeeeCCCchhhhhcccc-CCCCCCCeeEEEE------eeccEEEEeeEEeeCCCCeEEeeccccE
Q 011615 155 IFGTNLTDVVVTGGNATINGQGEPWWIKYRKK-QFNVTRPYLIEVM------FSDNVQISNLTLIDSPSWNVHPVYSSNV 227 (481)
Q Consensus 155 i~~~~~~ni~I~G~~G~idG~g~~ww~~~~~~-~~~~~rp~~i~~~------~~~nv~I~g~~i~ns~~~~i~~~~~~nv 227 (481)
|.+.+++||+|+|. |+|||+|+.||...... .....||.++.|. +|+||+|+|++++|+|+|++++..|+||
T Consensus 280 i~~~~~~nv~ItG~-GtIDG~G~~ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~Giti~NSp~w~i~~~~c~nV 358 (574)
T 1ogo_X 280 IEYFTKQNFYATGH-GILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGI 358 (574)
T ss_dssp EEECCSSCEEEESS-CEEECTTSCTTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEESCEEECCSSCSEEECSSSCE
T ss_pred EEEeCceeEEEEeC-EEEeCCCcccccccccccccccCCcceEEEEeccccCCceeEEEECeEEECCCCcEEeecCCCCh
Confidence 66788999999996 99999999999642211 1123478888888 9999999999999999999999999999
Q ss_pred --EEEeEEEECCCCCCCCCCcCCCCCccEEEEecEEecCCceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCce-EE
Q 011615 228 --LIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAA-IA 304 (481)
Q Consensus 228 --~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~g-is 304 (481)
+|+++++.++. .+++||||+. +||+|+||+|.++||||+|++ +||+|+||+|+.+++++ |+
T Consensus 359 ~~~I~nv~i~~~~-~~nTDGIDi~--~NV~I~nc~I~~gDDcIaIks-------------~NI~I~nc~i~~g~g~g~Is 422 (574)
T 1ogo_X 359 SSQISDYKQVGAF-FFQTDGPEIY--PNSVVHDVFWHVNDDAIKIYY-------------SGASVSRATIWKCHNDPIIQ 422 (574)
T ss_dssp EEEEEEEEEECCC-STTCCCCBCC--TTCEEEEEEEEESSCSEECCS-------------TTCEEEEEEEEECSSSCSEE
T ss_pred hhEEEeeEeeCCC-CCCCccCccc--CCEEEEeeEEECCCCEEEECC-------------ccEEEEeEEEECCCCCceEE
Confidence 99999998753 3569999998 999999999999999999985 89999999999876777 99
Q ss_pred eccCcCCCEEEEEEEeeEEEcCCc--------eEEE----------EeecCCCceeecEEEEeeEEccceeeEEEEcccC
Q 011615 305 LGSEMSGGIKDVRAEDITAINTQS--------GVRI----------KTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYG 366 (481)
Q Consensus 305 IGs~~~~~v~nI~v~n~~~~~~~~--------Gi~I----------kt~~g~~g~v~nI~f~ni~~~~~~~~i~i~~~y~ 366 (481)
|||. .+.++||+|+||+|.++.. +..| ++..+ .| | ||+|+||+|+++.+++ |...
T Consensus 423 IGS~-~g~V~NV~v~N~~i~~~~~~~~~~~~~g~iiGs~~~y~~~~~~~~g-~g-V-NI~f~NI~~~~v~~~i-i~i~-- 495 (574)
T 1ogo_X 423 MGWT-SRDISGVTIDTLNVIHTRYIKSETVVPSAIIGASPFYASGMSPDSR-KS-I-SMTVSNVVCEGLCPSL-FRIT-- 495 (574)
T ss_dssp CCSS-CCCEEEEEEEEEEEEECCCSSCCTTTTCEEEEECCCSSSSCCCEEE-EE-E-EEEEEEEEECSSBCEE-EEEC--
T ss_pred EcCC-CCcEEEEEEEeEEEECCcccceeccccceeeccccccccccccCCC-ce-E-EEEEEeEEEEceeEee-EEEC--
Confidence 9995 6789999999999998764 2332 22222 24 8 9999999999998886 3321
Q ss_pred CCCCCCCCCCCCCeEEeEEEEEEEEEc------c-CeeEEEeccCCCCeeeEEEEeEEEEec
Q 011615 367 SHPDPGFDPKALPTVTGINYRDMVADN------V-TQSAKLDGIRNDPFTGICISNVTIKLT 421 (481)
Q Consensus 367 ~~~~~~~~~~~~~~i~nItf~nI~~~~------~-~~~~~l~g~~~~~~~~I~~~ni~i~~~ 421 (481)
+ .+.|+||+|+||+++. . ..+..+.|.+ .+|+||+|+||++...
T Consensus 496 --------p--~~~I~nI~~~NI~i~g~~~~~~~~~~~~~i~G~~-~~v~nI~~~NV~i~g~ 546 (574)
T 1ogo_X 496 --------P--LQNYKNFVVKNVAFPDGLQTNSIGTGESIIPAAS-GLTMGLAISAWTIGGQ 546 (574)
T ss_dssp --------C--SEEEEEEEEEEEEETTCBCCSTTCTTCEEECCCT-TCCEEEEEEEEEETTE
T ss_pred --------C--CCCEEEEEEEeEEEeCccccccccccceeEecCC-CccceEEEEeEEEeCE
Confidence 1 1479999999999765 2 2345677777 9999999999999643
No 14
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=100.00 E-value=1.1e-41 Score=351.53 Aligned_cols=270 Identities=15% Similarity=0.187 Sum_probs=211.6
Q ss_pred ccccceEEE-EeecCccCCCccchHHHHHHHHHHhhhcccC-CCcEEEeCCCcceeeeEEeccceeEEEccCcEEEecCC
Q 011615 50 LNCRKHSAV-LTDFGGVGDGKTSNTKAFNTAISNLSKYAAD-GGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQD 127 (481)
Q Consensus 50 ~~~~~~~~n-V~dyGA~gDG~tDdt~Aiq~Ai~~a~~~~~~-~g~~v~iP~G~Yl~~~i~l~s~~~l~l~~ga~i~~~~~ 127 (481)
|..+..+|+ |++|||+|||++|||+|||+||++|++ . ++++|+||+|+|++++|.|+|+++|+|+.|++|+++.+
T Consensus 15 p~~~~~~~~~V~dfGA~gDG~tDdT~Aiq~Aidac~~---~~ggg~V~vP~GtYl~g~I~lks~v~L~l~~GatL~~s~~ 91 (464)
T 1h80_A 15 PTQQDVNYDLVDDFGANGNDTSDDSNALQRAINAISR---KPNGGTLLIPNGTYHFLGIQMKSNVHIRVESDVIIKPTWN 91 (464)
T ss_dssp CSCCSEEEEHHHHHCCCTTSSSBCHHHHHHHHHHHHT---STTCEEEEECSSEEEECSEECCTTEEEEECTTCEEEECCC
T ss_pred CCCCcceeeehhccCcCCCCCchhHHHHHHHHHHHhh---ccCCcEEEECCCeEEEeeEeccCceEEEEcCCcEEEeccC
Confidence 445567889 999999999999999999999998875 4 68999999999999999999999999999999999874
Q ss_pred --CCCCCCCCCCCCCCCCCCCCCCCceeeEE---EeceeceEEEccce---eeeCCCchhhhhccccCCCCCCCeeEEEE
Q 011615 128 --ESEWPLLPPLPSYGRGRDEPGGRFSSLIF---GTNLTDVVVTGGNA---TINGQGEPWWIKYRKKQFNVTRPYLIEVM 199 (481)
Q Consensus 128 --~~~~~~~~~~~~~~~g~~~~~~~~~~~i~---~~~~~ni~I~G~~G---~idG~g~~ww~~~~~~~~~~~rp~~i~~~ 199 (481)
...| +++. +.+++||+|+|. | +|||+|+. ..+|.+|.|.
T Consensus 92 td~~~y---------------------~~~~~~~~~~~~nItI~G~-Gg~~~iDG~G~~-----------~~rp~~i~~~ 138 (464)
T 1h80_A 92 GDGKNH---------------------RLFEVGVNNIVRNFSFQGL-GNGFLVDFKDSR-----------DKNLAVFKLG 138 (464)
T ss_dssp TTCSCE---------------------EEEEESSSSCEEEEEEEEC-TTCEEEECTTCS-----------CCBEEEEEEC
T ss_pred CCcccC---------------------CceEeecccCccceEEECc-CcceEEeCCCCC-----------CCCceEEEEE
Confidence 2222 1222 278999999996 8 99998852 3478999999
Q ss_pred eeccEEEEeeEEeeCCCCeEEeeccccEEEEeEEEECCCCCCCCCCcCCCCCccEEEEecEEecCCceeeecCCCCccCc
Q 011615 200 FSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGI 279 (481)
Q Consensus 200 ~~~nv~I~g~~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~ 279 (481)
+|+|++|+|++++| .|+++ .|.+|. + .|+|||++ .|+||+|+||+|.++||++...
T Consensus 139 ~~~Nv~I~gIti~n--~w~ih--~s~~V~-----i------~NtDGi~i-~s~nV~I~n~~I~~gddgiGs~-------- 194 (464)
T 1h80_A 139 DVRNYKISNFTIDD--NKTIF--ASILVD-----V------TERNGRLH-WSRNGIIERIKQNNALFGYGLI-------- 194 (464)
T ss_dssp SEEEEEEEEEEEEC--CSCBS--CSEEEC-----E------EEETTEEE-EEEEEEEEEEEEESCCTTCEEE--------
T ss_pred eeccEEEeeeEEec--cceEe--eceeee-----e------ecCCCcee-eccCEEEeceEEecCCCeEEec--------
Confidence 99999999999999 45533 443332 2 26899998 8999999999999999987521
Q ss_pred ccCCceeeEEEEEEEEeCCCCceEEeccC-------cCCCEEEEEEEeeEEEcCCceEEEEeecCCCceeecEEEEeeEE
Q 011615 280 KVGMPTQHLIIRRLICISPDSAAIALGSE-------MSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352 (481)
Q Consensus 280 ~~~~~s~nI~I~n~~~~~~~~~gisIGs~-------~~~~v~nI~v~n~~~~~~~~Gi~Ikt~~g~~g~v~nI~f~ni~~ 352 (481)
...+++||+|+||+|.+ ++|+.|.+. ..+.++||+|+||+|.+..++|+|+++ .+.++||+|+||++
T Consensus 195 -~~~~~~NV~V~n~~~~g--g~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~~nv~~~I~I~p~---~~~isnItfeNI~~ 268 (464)
T 1h80_A 195 -QTYGADNILFRNLHSEG--GIALRMETDNLLMKNYKQGGIRNIFADNIRCSKGLAAVMFGPH---FMKNGDVQVTNVSS 268 (464)
T ss_dssp -EESEEEEEEEEEEEEES--SEEEEEECCCHHHHHHTCCEEEEEEEEEEEEESSSEEEEEECT---TCBCCCEEEEEEEE
T ss_pred -ccCCEeEEEEEeeEEEC--CCEEEEEeCCceeccCCCCcEEEEEEEeEEEECCceeEEEeCC---CceEeEEEEEEEEE
Confidence 11249999999999998 788888664 356799999999999999999999953 35789999999999
Q ss_pred ccceeeEEEEcccCCCCCCCCCCCCCCeEEeEEEEEEE
Q 011615 353 KTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMV 390 (481)
Q Consensus 353 ~~~~~~i~i~~~y~~~~~~~~~~~~~~~i~nItf~nI~ 390 (481)
+++..++.|++.|++..+ +... ...+.+|+|-.
T Consensus 269 t~~~~aI~i~q~y~~~fd----~~~~-~~~~~~~~~~~ 301 (464)
T 1h80_A 269 VSCGSAVRSDSGFVELFS----PTDE-VHTRQSWKQAV 301 (464)
T ss_dssp ESSSCSEEECCCCCEECC--------------------
T ss_pred EccceeEEEecCcccccC----cccc-ccccceecccc
Confidence 999999999999985422 2221 34555565444
No 15
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=100.00 E-value=7e-41 Score=349.71 Aligned_cols=274 Identities=18% Similarity=0.227 Sum_probs=216.7
Q ss_pred ceEEEEeecCccCCCccchHHHHHHHHHHhhhcccCCCcEEEeCCCccee-eeEEeccceeEEEcc--CcEEEecCCCCC
Q 011615 54 KHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLT-GSFNLTSHFTLYIHK--DALLLASQDESE 130 (481)
Q Consensus 54 ~~~~nV~dyGA~gDG~tDdt~Aiq~Ai~~a~~~~~~~g~~v~iP~G~Yl~-~~i~l~s~~~l~l~~--ga~i~~~~~~~~ 130 (481)
+.++||+||||+|||++|||+|||+||++ + ++|+||+|+|++ ++|.|+++++|+++. .++|+++.+...
T Consensus 20 ~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~~-------G-g~V~iP~GtYlis~~l~l~snv~L~g~g~~~t~L~~~~~~p~ 91 (609)
T 3gq8_A 20 QFGVSVKTYGAKGDGVTDDIRAFEKAIES-------G-FPVYVPYGTFMVSRGIKLPSNTVLTGAGKRNAVIRFMDSVGR 91 (609)
T ss_dssp SSSEEGGGGTCCCEEEEECHHHHHHHHHT-------S-SCEEECSEEEEESSCEEECSSEEEEESCTTTEEEEECTTCCS
T ss_pred CcEEEeEecccCCCCCchhHHHHHHHHHc-------C-CEEEECCccEEEeCceEECCCcEEEEeeCCCCEEEeCCCCCC
Confidence 45799999999999999999999999984 3 899999999998 899999999999976 467887654333
Q ss_pred CCCCCCCCCCCCCCCCCCCCceeeEEEeceeceEEEccceeeeCCCchhhhhccccCCCCCCCeeEEEEeeccEEEEeeE
Q 011615 131 WPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLT 210 (481)
Q Consensus 131 ~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~ni~I~G~~G~idG~g~~ww~~~~~~~~~~~rp~~i~~~~~~nv~I~g~~ 210 (481)
|.. .+.+|+++.+.+||+|+| ++|||+|+.||... ......||.+|.|.+|+|++|++++
T Consensus 92 ~~~----------------li~~lI~a~~~~NItItG--~TIDGNG~~~g~~~--~~~g~~RP~lI~f~~c~NV~I~gVt 151 (609)
T 3gq8_A 92 GES----------------LMYNENVTTGNENIFLSS--FTLDGNNKRLGQGI--SGIGGSRESNLSIRACHNVYIRDIE 151 (609)
T ss_dssp SCC----------------SEEESCTTTCCEEEEEEE--EEEECCGGGGCSSC--CCSSTTTTCSEEEESCEEEEEEEEE
T ss_pred CCc----------------eeeeeeeecccccEEEEe--eEEECCccccCccc--ccCCCCCccEEEEEeeceEEEEeeE
Confidence 210 123456678899999999 59999999555421 1234579999999999999999999
Q ss_pred EeeCCCCeEEeeccccEEEEeEEEECCCCCCCCCCcCCCC------CccEEEEecEE-ecCCceeeecCCCCccCcccCC
Q 011615 211 LIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDS------CTNTRIEDNYI-VSGDDCVAVKSGWDEYGIKVGM 283 (481)
Q Consensus 211 i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~------s~nV~I~n~~i-~~gDD~iai~sg~~~~g~~~~~ 283 (481)
++|++.+++. |.++.. | ||+++++ |+||+|+||+| .++||||++++
T Consensus 152 i~NSp~~gI~-------------I~~~~~--N-DGid~DGi~fd~~S~NV~I~Nc~I~~tGDDcIaIks----------- 204 (609)
T 3gq8_A 152 AVDCTLHGID-------------ITCGGL--D-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH----------- 204 (609)
T ss_dssp EESCSSCSEE-------------EECSSS--S-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS-----------
T ss_pred EEeCCCCCeE-------------EeCCCC--C-ccccCCCccccccceeEEEEeeEEEecCCCEEEecC-----------
Confidence 9999986544 444432 3 6777766 99999999999 56999999987
Q ss_pred ceeeEEEEEEEEeCCC----CceEEeccCcCCCEEEEEEEeeEEEcCCceEEEEeecCCCceeecEEEEe-eEEccce-e
Q 011615 284 PTQHLIIRRLICISPD----SAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRR-MTMKTMK-Y 357 (481)
Q Consensus 284 ~s~nI~I~n~~~~~~~----~~gisIGs~~~~~v~nI~v~n~~~~~~~~Gi~Ikt~~g~~g~v~nI~f~n-i~~~~~~-~ 357 (481)
++||+|+||+|...+ ++||+||++ .+||+|+||++.++.+|+|||++. +++.++||.|+| +.+++++ +
T Consensus 205 -seNI~I~Nc~~~gp~G~S~~~GIsIGsg----s~NVtV~Nc~i~nt~~GIrIKt~~-~~~~v~NV~I~n~vs~~nvrsy 278 (609)
T 3gq8_A 205 -SQYINILNCYSHDPRLTANCNGFEIDDG----SRHVVLSNNRSKGCYGGIEIKAHG-DAPAAYNISINGHMSVEDVRSY 278 (609)
T ss_dssp -CEEEEEESCEEECCSSCSSCCSEEECTT----CEEEEEESEEEESSSEEEEEEECT-TSCCCEEEEEEEEEEESCSEEE
T ss_pred -CeeEEEEeEEEECCCCCCCcccEEccCC----cccEEEEeeEEECCCCEEEEEecC-CCCccccEEEECCEeecCceEe
Confidence 899999999996543 589999853 499999999999999999999965 467999999999 5667753 5
Q ss_pred eEEEEcccCCCCCCCCCCCCCCeEEeEEEEEEEEEcc
Q 011615 358 VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNV 394 (481)
Q Consensus 358 ~i~i~~~y~~~~~~~~~~~~~~~i~nItf~nI~~~~~ 394 (481)
.+...++|... +|.. ....||+++|+.....
T Consensus 279 n~r~iG~~~a~-----dp~s-~~a~nV~l~n~~~~~p 309 (609)
T 3gq8_A 279 NFRHIGHHAAT-----APQS-VSAKNIVASNLVSIRP 309 (609)
T ss_dssp EEEETTSCSTT-----SCCC-SSCEEEEEEEEEEESC
T ss_pred cceEEccccCC-----CCCc-ceecceEeecceEEee
Confidence 66665555310 1222 3568999999988653
No 16
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=100.00 E-value=1e-40 Score=353.11 Aligned_cols=275 Identities=17% Similarity=0.227 Sum_probs=215.7
Q ss_pred cceEEEEeecCccCCCccchHHHHHHHHHHhhhcccCCCcEEEeCCCccee-eeEEeccceeEEEcc--CcEEEecCCCC
Q 011615 53 RKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLT-GSFNLTSHFTLYIHK--DALLLASQDES 129 (481)
Q Consensus 53 ~~~~~nV~dyGA~gDG~tDdt~Aiq~Ai~~a~~~~~~~g~~v~iP~G~Yl~-~~i~l~s~~~l~l~~--ga~i~~~~~~~ 129 (481)
++.++||+||||+|||++|||+|||+||++ + ++|+||+|+|++ ++|.|+++++|+++. .++|+++.+..
T Consensus 19 ~~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~a-------G-g~V~IPaGtYlisg~I~L~snv~L~Geg~~~t~Lk~~~d~p 90 (772)
T 3gqn_A 19 KQFGVSVKTYGAKGDGVTDDIRAFEKAIES-------G-FPVYVPYGTFMVSRGIKLPSNTVLTGAGKRNAVIRFMDSVG 90 (772)
T ss_dssp CSSSEESGGGTCCCEEEEECHHHHHHHHHT-------T-SCEEECSEEEEESSCEEECSSCEEEEEEEEEEEEEECTTCC
T ss_pred CCcEEEeEecccCCCCChhHHHHHHHHHHc-------C-CEEEECCccEEEEeEEEECCCcEEEEecCCCCEEEeCCCCC
Confidence 345799999999999999999999999984 3 899999999998 899999999999875 36777765433
Q ss_pred CCCCCCCCCCCCCCCCCCCCCceeeEEEeceeceEEEccceeeeCCCchhhhhccccCCCCCCCeeEEEEeeccEEEEee
Q 011615 130 EWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNL 209 (481)
Q Consensus 130 ~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~ni~I~G~~G~idG~g~~ww~~~~~~~~~~~rp~~i~~~~~~nv~I~g~ 209 (481)
.|.. .+.+|+++.+++||+|+| ++|||+|+.||... ......||.+|.|.+|+|++|+++
T Consensus 91 ~~~~----------------li~~lI~a~gveNItItG--~TIDGNG~~~g~~~--~~~g~~RP~lI~f~~ckNV~I~gV 150 (772)
T 3gqn_A 91 RGES----------------LMYNENVTTGNENIFLSS--FTLDGNNKRLGQGI--SGIGGSRESNLSIRACHNVYIRDI 150 (772)
T ss_dssp SSCC----------------SEEESCTTTCCEEEEEEE--EEEECCGGGGCSSC--CCSSTTTTCSEEEESCEEEEEEEE
T ss_pred CCCc----------------eeeeeeeccCceeEEEEe--eEEeCCccccCccc--ccCCCCCccEEEEEeeceEEEEeE
Confidence 3210 123566778899999999 59999999544321 123457999999999999999999
Q ss_pred EEeeCCCCeEEeeccccEEEEeEEEECCCCCCCCCCcCCCC------CccEEEEecEE-ecCCceeeecCCCCccCcccC
Q 011615 210 TLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDS------CTNTRIEDNYI-VSGDDCVAVKSGWDEYGIKVG 282 (481)
Q Consensus 210 ~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~------s~nV~I~n~~i-~~gDD~iai~sg~~~~g~~~~ 282 (481)
+++|++.+++ +|.++.. | ||+++++ |+||+|+||+| .++||||++++
T Consensus 151 ti~NSp~~gI-------------~I~np~~--N-DGid~DGi~fdi~S~NV~I~Nc~I~ntGDDcIAIks---------- 204 (772)
T 3gqn_A 151 EAVDCTLHGI-------------DITCGGL--D-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH---------- 204 (772)
T ss_dssp EEESCSSCSE-------------EEECSSS--S-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS----------
T ss_pred EEEeCCCCCE-------------EEeCCCc--C-CcCCCcCcccccccceEEEEeeEEEecCcCeEEecC----------
Confidence 9999998544 4555442 3 6777776 99999999999 55999999987
Q ss_pred CceeeEEEEEEEEeCCC----CceEEeccCcCCCEEEEEEEeeEEEcCCceEEEEeecCCCceeecEEEEe-eEEccce-
Q 011615 283 MPTQHLIIRRLICISPD----SAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRR-MTMKTMK- 356 (481)
Q Consensus 283 ~~s~nI~I~n~~~~~~~----~~gisIGs~~~~~v~nI~v~n~~~~~~~~Gi~Ikt~~g~~g~v~nI~f~n-i~~~~~~- 356 (481)
++||+|+||+|.+.+ ++||+||++ .+||+|+||++.++.+|+|||++. +++.++||.|.+ +.+++++
T Consensus 205 --SeNI~I~Nc~c~gphG~S~~~GIsIGsg----s~NVtV~Nc~~~nT~nGIRIKt~~-~gg~v~NV~I~gnis~~dvrs 277 (772)
T 3gqn_A 205 --SQYINILNCYSHDPRLTANCNGFEIDDG----SRHVVLSNNRSKGCYGGIEIKAHG-DAPAAYNISINGHMSVEDVRS 277 (772)
T ss_dssp --CEEEEEESCEEECCSSSSSCCSEEECTT----CEEEEEEEEEEESSSEEEEECCCT-TSCCCEEEEEEEEEEESCSEE
T ss_pred --CceEEEEeEEEECCCCCCCcccEEecCC----cccEEEEceEEECCCcEEEEEEeC-CCCccccEEEECCEEeccCeE
Confidence 899999999996542 589999953 499999999999999999999864 467899999985 8887763
Q ss_pred eeEEEEcccCCCCCCCCCCCCCCeEEeEEEEEEEEEcc
Q 011615 357 YVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNV 394 (481)
Q Consensus 357 ~~i~i~~~y~~~~~~~~~~~~~~~i~nItf~nI~~~~~ 394 (481)
+.+...+++.. .+|.+ ....||+++|+.....
T Consensus 278 ynir~iG~h~a-----~dp~s-~~a~nV~l~n~~~~~P 309 (772)
T 3gqn_A 278 YNFRHIGHHAA-----TAPQS-VSAKNIVASNLVSIRP 309 (772)
T ss_dssp EEECCTTSCSS-----SSCCC-SSCEEEEEEEEEEESC
T ss_pred ecceEEccccC-----CCCCC-ccCccEEeecceEEcc
Confidence 45554444321 01222 3668899999887643
No 17
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=100.00 E-value=7.3e-36 Score=294.58 Aligned_cols=228 Identities=21% Similarity=0.296 Sum_probs=185.1
Q ss_pred ceEEEEeecCccCCCccchHHHHHHHHHHhhhcccCCCcEEEeCCC----cceee-eEEeccceeEEEccCcEEEecCCC
Q 011615 54 KHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPG----KWLTG-SFNLTSHFTLYIHKDALLLASQDE 128 (481)
Q Consensus 54 ~~~~nV~dyGA~gDG~tDdt~Aiq~Ai~~a~~~~~~~g~~v~iP~G----~Yl~~-~i~l~s~~~l~l~~ga~i~~~~~~ 128 (481)
+..+||+||||+|||++|||+|||+||++|++. .++++|+||+| +|+++ ++.|+++++|+++.+++|+++...
T Consensus 49 s~~~NVkDFGAkGDGvTDDTaAIQkAIdaA~a~--~GGGtVyVPaG~~~~tYlvt~tI~LkSnV~L~Ge~~AtIl~s~~~ 126 (514)
T 2vbk_A 49 KEAISILDFGVIDDGVTDNYQAIQNAIDAVASL--PSGGELFIPASNQAVGYIVGSTLLIPGGVNIRGVGKASQLRAKSG 126 (514)
T ss_dssp TTCCBGGGGCCCCSSSSCCHHHHHHHHHHHHTS--TTCEEEECCCCSSTTCEEESSCEEECTTEEEECCSTTSEEEECTT
T ss_pred CcEEEeeccCcCCCCCcccHHHHHHHHHHHhhc--CCCeEEEECCCCcceeEEECCeEEecCCeEEEEecCceEeecccc
Confidence 468999999999999999999999999999862 37899999999 89875 899999999999999988765321
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCceeeEEEeceeceEEEccceeeeCCCchhhhhccccCCCCCCCeeEEEEeeccEEEEe
Q 011615 129 SEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISN 208 (481)
Q Consensus 129 ~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~ni~I~G~~G~idG~g~~ww~~~~~~~~~~~rp~~i~~~~~~nv~I~g 208 (481)
. .|. +....|.+++.+.+++||+|+|. |+|||++..|+.... ...++..+ .+++|.|++
T Consensus 127 ----I--------~Gt-Iia~~y~s~I~~~~VeNIaITG~-GTIDG~g~n~t~e~~----~~Rq~~~~---~fdnV~Vn~ 185 (514)
T 2vbk_A 127 ----L--------TGS-VLRLSYDSDTIGRYLRNIRVTGN-NTCNGIDTNITAEDS----VIRQVYGW---VFDNVMVNE 185 (514)
T ss_dssp ----C--------CSE-EEEECCCSCCSCEEEESCEEECC-SSSEEEEESCCTTCS----SCCCEESE---EEESCEEEE
T ss_pred ----c--------ccc-EEeccCCccccccCceEEEEECC-CeEeCCCCCccccce----eeeccceE---EeeeEEEEe
Confidence 0 010 00113456788899999999996 999998765532110 11122233 367999999
Q ss_pred eEE--eeCCCCeEEeeccccEEEE-eEEEECCCCCCCCCCcCCCCCccEEEEecEEecCCceeeecCCCCccCcccCCce
Q 011615 209 LTL--IDSPSWNVHPVYSSNVLIQ-GLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPT 285 (481)
Q Consensus 209 ~~i--~ns~~~~i~~~~~~nv~i~-~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s 285 (481)
++. .+++.|++++..|++++++ ++++. ++|+||+|.+|+|..|||||++|+|.-..+.++.+|+
T Consensus 186 Vt~~v~~Sg~WTIhPi~Cqnvt~r~gL~f~-------------eSCrNV~IsnC~FsVGDdciaiksGk~~~~~~~~~~s 252 (514)
T 2vbk_A 186 VETAYLMQGLWHSKFIACQAGTCRVGLHFL-------------GQCVSVSVSSCHFSRGNYSADESFGIRIQPQTYAWSS 252 (514)
T ss_dssp EEEEEEEESEEEEEEESCEEEEEEEEEEEE-------------SCCEEEEEESCEEECTTSCCTTCEEEEEECBCCTTTS
T ss_pred EEEeEeccCcEEEeEeccCceecccCcccc-------------CCCCeEEEeccEEecCcceeeeecCceecccccCCcc
Confidence 964 5789999999999999998 66664 2899999999999999999999999877888899999
Q ss_pred eeEEEEEEEEeCCCCceEEeccC-cCCCEEE-EEEEeeEEEcCC
Q 011615 286 QHLIIRRLICISPDSAAIALGSE-MSGGIKD-VRAEDITAINTQ 327 (481)
Q Consensus 286 ~nI~I~n~~~~~~~~~gisIGs~-~~~~v~n-I~v~n~~~~~~~ 327 (481)
+||. ..++.|||| +.++++| |+|++|.|.+++
T Consensus 253 e~~~----------hgav~igSE~m~~Gvk~~v~v~~Clf~~td 286 (514)
T 2vbk_A 253 EAVR----------SEAIILDSETMCIGFKNAVYVHDCLDLHME 286 (514)
T ss_dssp SCBC----------CEEEEEESSEEEESCSEEEEESCCEEEEEE
T ss_pred hhcc----------cccEEECchhhcccccccEEEEeeeccCCc
Confidence 9998 348999999 8899999 999999999874
No 18
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.97 E-value=6e-31 Score=268.62 Aligned_cols=314 Identities=14% Similarity=0.186 Sum_probs=214.3
Q ss_pred EEEEeecCccCCCccchHHHHHHHHHHhhhcccCCCcEEEeCCCccee--------eeEEeccceeEEEc-cC-cEEEec
Q 011615 56 SAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLT--------GSFNLTSHFTLYIH-KD-ALLLAS 125 (481)
Q Consensus 56 ~~nV~dyGA~gDG~tDdt~Aiq~Ai~~a~~~~~~~g~~v~iP~G~Yl~--------~~i~l~s~~~l~l~-~g-a~i~~~ 125 (481)
++||+||||+|||++|||+|||+||++|++ .++++|+||+|+|++ ++|.|+++++|+++ .+ ++|++.
T Consensus 2 ~~~v~~~ga~~dg~~ddt~aiq~Ai~~a~~---~gg~~v~~p~G~y~~~~~~~~~~g~l~~~~~v~l~g~g~~~t~l~~~ 78 (377)
T 2pyg_A 2 DYNVKDFGALGDGVSDDRASIQAAIDAAYA---AGGGTVYLPAGEYRVSAAGEPGDGCLMLKDGVYLAGAGMGETVIKLI 78 (377)
T ss_dssp CEEGGGGTCCCEEEEECHHHHHHHHHHHHH---TTSEEEEECSEEEEECCCSSGGGCSEECCTTEEEEESSBTTEEEEEC
T ss_pred EeeeeecCCCCCCCcchHHHHHHHHHHHHh---cCCCEEEECCeEEEEcccccCCcccEEecCCeEEEEcCCCCcEEEec
Confidence 589999999999999999999999999986 578999999999987 48999999999998 45 455666
Q ss_pred CCCCCCCCCCCCC-CCCCCCCCCCCCceeeEEEeceeceEEEccc----eeeeCCCchhhhhccccCCCCCCCeeEEEEe
Q 011615 126 QDESEWPLLPPLP-SYGRGRDEPGGRFSSLIFGTNLTDVVVTGGN----ATINGQGEPWWIKYRKKQFNVTRPYLIEVMF 200 (481)
Q Consensus 126 ~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~i~~~~~~ni~I~G~~----G~idG~g~~ww~~~~~~~~~~~rp~~i~~~~ 200 (481)
.+...++.. .++ .++. .. ....+++++|.|.. |++|| ||...... .+..
T Consensus 79 ~~~~~~~~~-~~~~~~g~----------~~-~~~~~~~~~I~G~~~~~~G~idG----w~~~~~~~----------~~~~ 132 (377)
T 2pyg_A 79 DGSDQKITG-MVRSAYGE----------ET-SNFGMRDLTLDGNRDNTSGKVDG----WFNGYIPG----------GDGA 132 (377)
T ss_dssp TTCBSCEEE-EEECCTTS----------CC-EEEEEEEEEEECCGGGCBSCEEE----EEECSCTT----------SSCC
T ss_pred CCCccCccc-eEeccCCC----------cc-eEEEEEEEEEECCCccCCccccc----eecccCcc----------cccc
Confidence 544433210 000 0111 01 23568999999941 78887 88643211 1246
Q ss_pred eccEEEEeeEEeeCCCCeEEeeccc-cEEEEeEEEECCC-------------------CCCCCCCcCCCC-CccEEEEec
Q 011615 201 SDNVQISNLTLIDSPSWNVHPVYSS-NVLIQGLTIRAPI-------------------DSPNTDGINPDS-CTNTRIEDN 259 (481)
Q Consensus 201 ~~nv~I~g~~i~ns~~~~i~~~~~~-nv~i~~~~i~~~~-------------------~~~n~DGI~~~~-s~nV~I~n~ 259 (481)
|++++|++++++|++.|++++..|. +++++|+.+.... ..++.|||++.. +++++|+++
T Consensus 133 ~~nv~I~~~~i~n~~~~gi~~~~~~~~~~i~n~~~~~~~~dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN 212 (377)
T 2pyg_A 133 DRDVTIERVEVREMSGYGFDPHEQTINLTIRDSVAHDNGLDGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNN 212 (377)
T ss_dssp EEEEEEEEEEEECCSSCSEEECSSEEEEEEESCEEESCSSCSEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESC
T ss_pred ccceEEEeEEEEecccceEEeecccCCeEEEeEEeecCCCCceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECC
Confidence 9999999999999999999998876 5777776663211 124578888766 788888888
Q ss_pred EEecCCceeeecC-CCCccCcccCCceeeEEEEEEEEeCCCCceEEeccCcCCCEEEEEEEeeEEEcC-CceEEEEeecC
Q 011615 260 YIVSGDDCVAVKS-GWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINT-QSGVRIKTAVG 337 (481)
Q Consensus 260 ~i~~gDD~iai~s-g~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~~~~v~nI~v~n~~~~~~-~~Gi~Ikt~~g 337 (481)
.+...+||+++.. +.+ ....++|++|++++++...++|+.+. .+++++|+|+++.+. ..||+|+.
T Consensus 213 ~i~~~~~g~~~~~~g~~-----~~~~s~nv~i~~N~~~~n~~~Gi~~~-----~~~~v~i~~N~i~~~~~~GI~i~g--- 279 (377)
T 2pyg_A 213 VAYGNGSSGLVVQRGLE-----DLALPSNILIDGGAYYDNAREGVLLK-----MTSDITLQNADIHGNGSSGVRVYG--- 279 (377)
T ss_dssp EEESCSSCSEEEECCSS-----CCCCCEEEEEESCEEESCSSCSEEEE-----EEEEEEEESCEEESCSSCSEEEEE---
T ss_pred EEECccCceEEEecccc-----CCCCCccEEEECCEEEcCccCceEec-----cccCeEEECCEEECCCCceEEEec---
Confidence 8888777777631 111 11237888888888887556677764 478999999999988 78999973
Q ss_pred CCceeecEEEEeeEEcccee----eEEEEcccCCCCCCCCCCCCCCeEEeEEEEEEEEEcc---CeeEEEeccCCCCeee
Q 011615 338 RGAYVKEIYVRRMTMKTMKY----VFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNV---TQSAKLDGIRNDPFTG 410 (481)
Q Consensus 338 ~~g~v~nI~f~ni~~~~~~~----~i~i~~~y~~~~~~~~~~~~~~~i~nItf~nI~~~~~---~~~~~l~g~~~~~~~~ 410 (481)
+++++|+|.++.+... ++.+.+.|...+... .....-+++++++.++.+. ...+.+.+ ..+++
T Consensus 280 ----~~~~~i~~N~i~~n~~~~~~~~v~~~~~~~~~~~~---~~~~~~~~~~i~~N~i~g~~~~~~~i~~~~---~~~~~ 349 (377)
T 2pyg_A 280 ----AQDVQILDNQIHDNAQAAAVPEVLLQSFDDTAGAS---GTYYTTLNTRIEGNTISGSANSTYGIQERN---DGTDY 349 (377)
T ss_dssp ----EEEEEEESCEEESCCSSSSCCSEEEECEEETTSSS---CEEECCBCCEEESCEEECCSSCCEEEEECS---SSCBC
T ss_pred ----CCCcEEECcEEECCcccccccceEEEEecCCCccc---eeeeeccCeEEECCEEECcCCCccceEEcc---CCCcc
Confidence 7889999999886532 333333343211000 0000014555665555552 34555543 55678
Q ss_pred EEEEeEEEEec
Q 011615 411 ICISNVTIKLT 421 (481)
Q Consensus 411 I~~~ni~i~~~ 421 (481)
++++|..+...
T Consensus 350 ~~i~~n~i~~~ 360 (377)
T 2pyg_A 350 SSLIDNDIAGV 360 (377)
T ss_dssp CEEESCEEESS
T ss_pred EEEECcEEeCC
Confidence 88888888754
No 19
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.90 E-value=5.4e-23 Score=218.15 Aligned_cols=246 Identities=16% Similarity=0.163 Sum_probs=178.4
Q ss_pred ccceEEEEeecCccCCCccchHHHHHHHHHHhhhcc------cCCCcEEEeCCCccee-eeEEeccceeEEEccC--cEE
Q 011615 52 CRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYA------ADGGAQLIVPPGKWLT-GSFNLTSHFTLYIHKD--ALL 122 (481)
Q Consensus 52 ~~~~~~nV~dyGA~gDG~tDdt~Aiq~Ai~~a~~~~------~~~g~~v~iP~G~Yl~-~~i~l~s~~~l~l~~g--a~i 122 (481)
.-+..+||+||||+|||++|||+|||+||++|.++. ...+++|+||+|+|++ ++|.|++++.|..+.. .+|
T Consensus 45 ~y~v~~nV~dfGA~GDG~tDDT~Aiq~Ai~~a~~~Gggc~~st~~~~~V~~P~GtYlvs~tI~l~~~t~L~G~~~~~pvI 124 (758)
T 3eqn_A 45 GYPVFRNVKNYGAKGDGNTDDTAAIQAAINAGGRCGQGCDSTTTQPALVYFPPGTYKVSSPLVVLYQTQLIGDAKNLPTL 124 (758)
T ss_dssp TCCSEEEGGGGTCCCEEEEECHHHHHHHHHTTSCSCTTCCCCSSSCEEEEECSSEEEESSCEECCTTEEEEECSSSCCEE
T ss_pred CCeEEEEHHHcCcCCCCCchhHHHHHHHHHHhhhcccccccccccceEEEECCceEEEcccEEccCCeEEEecCCCCCeE
Confidence 345678999999999999999999999999986521 0112699999999986 4899999999988765 467
Q ss_pred EecCCCCCCCCCCCCCCCCCCCCCCCCCceeeEEEeceeceEEEccceeeeCCCchhhhhccccCCCCCCCeeEEEEeec
Q 011615 123 LASQDESEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSD 202 (481)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~ni~I~G~~G~idG~g~~ww~~~~~~~~~~~rp~~i~~~~~~ 202 (481)
++.+. |.. ..+ |.+ ...+++|..||.. ....+..++
T Consensus 125 ka~~~---F~G------------------~~l----------i~~--d~y~~~G~~w~~~-----------~~~F~r~ir 160 (758)
T 3eqn_A 125 LAAPN---FSG------------------IAL----------IDA--DPYLAGGAQYYVN-----------QNNFFRSVR 160 (758)
T ss_dssp EECTT---CCS------------------SCS----------EES--SCBCGGGCBSSCG-----------GGCCCEEEE
T ss_pred ecCCC---CCC------------------cce----------eec--cccCCCCcccccc-----------ccceeeeec
Confidence 66432 110 011 333 3455677778743 123445666
Q ss_pred cEEEEeeEEeeCCCCeEEeeccccEEEEeEEEECCCCCC-CCCCcCCCCCccEEEEecEEecCCceeeecCCCCccCccc
Q 011615 203 NVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSP-NTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKV 281 (481)
Q Consensus 203 nv~I~g~~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~-n~DGI~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~ 281 (481)
|+.|+ ++-.++...+|++..|++..|+||.|..+..+. .++||+++++..+.|+|++|..|+=++.+.
T Consensus 161 NlviD-~t~~~~~~~gIhw~vaQatsL~Nv~i~m~~~sg~~~~GI~~e~GSgg~i~Dl~f~GG~~G~~~g---------- 229 (758)
T 3eqn_A 161 NFVID-LRQVSGSATGIHWQVSQATSLINIVFQMSTAAGNQHQGIFMENGSGGFLGDLVFNGGNIGATFG---------- 229 (758)
T ss_dssp EEEEE-CTTCSSCEEEEECCCCSSEEEEEEEEECCCSTTCCEEEEEECSCCCCEEEEEEEESCSEEEEEE----------
T ss_pred ceEEe-ccccCCCceEEEEEecCceEEEEEEEEecCCCCCcceeEEecCCCceEEEeeEEeCCceEEEcC----------
Confidence 77777 555666678999999999999999999987654 489999999999999999999998776663
Q ss_pred CCceeeEEEEEEEEeCCCCceEEeccCcCCCEEEEEEEeeEEEcCCceEEEEeecC---CCceeecEEEEeeEEccceee
Q 011615 282 GMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVG---RGAYVKEIYVRRMTMKTMKYV 358 (481)
Q Consensus 282 ~~~s~nI~I~n~~~~~~~~~gisIGs~~~~~v~nI~v~n~~~~~~~~Gi~Ikt~~g---~~g~v~nI~f~ni~~~~~~~~ 358 (481)
.+..+++|.+|.+. ..+|.+-... ..++.+++|.++.-||.|..... ..-.+--|++.|.+++|+..+
T Consensus 230 ---nQQfT~rnltF~~~-~taI~~~w~w-----gwt~~~~~i~nc~vGi~~~~g~~~~~~~q~vGsv~l~Ds~~~n~~~~ 300 (758)
T 3eqn_A 230 ---NQQFTVRNLTFNNA-NTAINAIWNW-----GWTFQRITINNCQVGFDLTQGGTSNTGAQGVGAEAIIDAVVTNTQTF 300 (758)
T ss_dssp ---CSCCEEEEEEEESC-SEEEEEEEBS-----CEEEEEEEEESCSEEEEECCCCSSTTSCCCBCEEEEEEEEEESCSEE
T ss_pred ---CcceEEeccEEeCh-HHHHhhhcCc-----eEEEEEeEEECCCccEEEcCCCCCcccCcceeeEEEEEeeEEcccce
Confidence 46778888888875 3466554333 24556666666666888855211 122467899999999998866
Q ss_pred EEE
Q 011615 359 FWM 361 (481)
Q Consensus 359 i~i 361 (481)
|..
T Consensus 301 i~t 303 (758)
T 3eqn_A 301 VRW 303 (758)
T ss_dssp EEE
T ss_pred EEe
Confidence 654
No 20
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=99.90 E-value=5.4e-22 Score=204.90 Aligned_cols=231 Identities=19% Similarity=0.239 Sum_probs=183.4
Q ss_pred eeEEEeceeceEEEccceeeeCCCchhhhhccccCCCCCCCeeEEEEeeccEEEEeeEEeeC--CCCeEEeeccccEEEE
Q 011615 153 SLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDS--PSWNVHPVYSSNVLIQ 230 (481)
Q Consensus 153 ~~i~~~~~~ni~I~G~~G~idG~g~~ww~~~~~~~~~~~rp~~i~~~~~~nv~I~g~~i~ns--~~~~i~~~~~~nv~i~ 230 (481)
.+|.+.+++|++|+|- ++.-. . ...+++..|+|++|+++++.++ ...++++..|+||+|+
T Consensus 191 ~~i~~~~~~nv~i~gi--ti~ns-p---------------~~~i~~~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~I~ 252 (448)
T 3jur_A 191 SFVQFYRCRNVLVEGV--KIINS-P---------------MWCIHPVLSENVIIRNIEISSTGPNNDGIDPESCKYMLIE 252 (448)
T ss_dssp CSEEEESCEEEEEESC--EEESC-S---------------SCSEEEESCEEEEEESCEEEECSTTCCSBCCBSCEEEEEE
T ss_pred eEEEEEcccceEEEee--EEEeC-C---------------CceEeeeccCCEEEEeEEEeeccCCCccccccCCcCEEEE
Confidence 4889999999999994 43311 1 2268999999999999999985 3567999999999999
Q ss_pred eEEEECCCC------CCCCCCcCCCC-CccEEEEecEEe--cCCceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCc
Q 011615 231 GLTIRAPID------SPNTDGINPDS-CTNTRIEDNYIV--SGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSA 301 (481)
Q Consensus 231 ~~~i~~~~~------~~n~DGI~~~~-s~nV~I~n~~i~--~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~ 301 (481)
|++|.+.++ ..+.||+++.. |+||+|+||+++ .+..||+|++.. ....+||+|+||++.++ .+
T Consensus 253 n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~-------~~~v~nV~v~n~~~~~t-~~ 324 (448)
T 3jur_A 253 KCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEM-------SGGVRNVVARNNVYMNV-ER 324 (448)
T ss_dssp SCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSC-------TTCEEEEEEESCEEESC-SE
T ss_pred eeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcc-------cCcEEEEEEEEEEEecc-cc
Confidence 999998543 23344544433 899999999994 456699998862 22489999999999986 68
Q ss_pred eEEeccC--cCCCEEEEEEEeeEEEcCCceE-EEEeecC-----CCceeecEEEEeeEEccceeeEEEEcccCCCCCCCC
Q 011615 302 AIALGSE--MSGGIKDVRAEDITAINTQSGV-RIKTAVG-----RGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGF 373 (481)
Q Consensus 302 gisIGs~--~~~~v~nI~v~n~~~~~~~~Gi-~Ikt~~g-----~~g~v~nI~f~ni~~~~~~~~i~i~~~y~~~~~~~~ 373 (481)
|+.|++. ..+.++||+|+|++|.+..+++ .|+.... ..+.|+||+|+||+.++...++.|.+.
T Consensus 325 GirIKt~~g~gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~~~~~~~~i~nI~~~NI~~t~~~~~i~i~g~--------- 395 (448)
T 3jur_A 325 ALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDNEEGEYLPVVRSVFVKNLKATGGKYAVRIEGL--------- 395 (448)
T ss_dssp EEEEECCTTTCSEEEEEEEESCEEEEESSEEEEEESCGGGCCCSCCCEEEEEEEESCEEEECSEEEEEECB---------
T ss_pred eEEEEEEcCCCceEeeEEEEEEEEECCccccEEEEeeccCCCCCCCceEEEEEEEeEEEEecceEEEEEeC---------
Confidence 9999984 3567999999999999999888 8977542 246899999999999988888888654
Q ss_pred CCCCCCeEEeEEEEEEEEEccCeeEEEec----cCCCCeeeEEEEeEEEEec
Q 011615 374 DPKALPTVTGINYRDMVADNVTQSAKLDG----IRNDPFTGICISNVTIKLT 421 (481)
Q Consensus 374 ~~~~~~~i~nItf~nI~~~~~~~~~~l~g----~~~~~~~~I~~~ni~i~~~ 421 (481)
+. ..++||+|+||+++..+.+..+.. .+...++|++|+||.+...
T Consensus 396 -~~--~p~~~I~~~nv~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~ing~ 444 (448)
T 3jur_A 396 -EN--DYVKDILISDTIIEGAKISVLLEFGQLGMENVIMNGSRFEKLYIEGK 444 (448)
T ss_dssp -TT--BCEEEEEEEEEEEESCSEEEEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred -CC--CCEeeEEEEEEEEEccccceeEeccccccccceecccEEEEEEEcCE
Confidence 11 479999999999998766666643 4556799999999999753
No 21
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.88 E-value=1.3e-20 Score=189.98 Aligned_cols=201 Identities=15% Similarity=0.200 Sum_probs=158.9
Q ss_pred eEEEEeeccEEEEe---eEEeeCC--CC------------eEEeeccccEEEEeEEEECCCCCCCCCCcCCCCCccEEEE
Q 011615 195 LIEVMFSDNVQISN---LTLIDSP--SW------------NVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIE 257 (481)
Q Consensus 195 ~i~~~~~~nv~I~g---~~i~ns~--~~------------~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~ 257 (481)
++.+ +.+||+|.| -+|.... .| .+.+..|+|++|+++++.+++ ..+|++. |+||+|+
T Consensus 89 ~i~~-~~~nv~I~G~~~g~IdG~G~~~w~~~~~~~~~rP~~i~~~~~~nv~i~~iti~nsp----~~~i~i~-~~nv~i~ 162 (362)
T 1czf_A 89 LISM-SGEHITVTGASGHLINCDGARWWDGKGTSGKKKPKFFYAHGLDSSSITGLNIKNTP----LMAFSVQ-ANDITFT 162 (362)
T ss_dssp SEEE-EEESCEEEECTTCEEECCGGGTCCSCTTSSSCCCCCEEEEEEETEEEESCEEECCS----SCCEEEE-CSSEEEE
T ss_pred EEEE-eCccEEEEcCCCcEEECCCchhhcccCCCCCCCCeEEEEeecccEEEEEEEEecCC----ccEEEEe-eCCEEEE
Confidence 5666 559999999 4554322 33 388999999999999999953 3469999 9999999
Q ss_pred ecEEec-CCceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEeccCcCCCEEEEEEEeeEEEcCCceEEEEeec
Q 011615 258 DNYIVS-GDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAV 336 (481)
Q Consensus 258 n~~i~~-gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~~~~v~nI~v~n~~~~~~~~Gi~Ikt~~ 336 (481)
|++|.+ .||+ +.+.+.+|.... .++||+|+||++..+ +++|+|++. +||+|+||++.+. +||.|++..
T Consensus 163 ~~~I~~~~~d~---~~~~NtDGidi~-~s~nV~I~n~~i~~g-DDcIaiksg-----~nI~i~n~~~~~g-hGisiGS~G 231 (362)
T 1czf_A 163 DVTINNADGDT---QGGHNTDAFDVG-NSVGVNIIKPWVHNQ-DDCLAVNSG-----ENIWFTGGTCIGG-HGLSIGSVG 231 (362)
T ss_dssp SCEEECGGGGT---TTCCSCCSEEEC-SCEEEEEESCEEECS-SCSEEESSE-----EEEEEESCEEESS-CCEEEEEEC
T ss_pred EEEEECCcccc---ccCCCCCceeec-CcceEEEEeeEEecC-CCEEEEeCC-----eEEEEEEEEEeCC-ceeEEeecc
Confidence 999998 3444 123344554443 389999999999986 789999973 8999999999986 689999862
Q ss_pred -CCCceeecEEEEeeEEccceeeEEEEcccCCCCCCCCCCCCCCeEEeEEEEEEEEEccC-eeEEEec---------cC-
Q 011615 337 -GRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVT-QSAKLDG---------IR- 404 (481)
Q Consensus 337 -g~~g~v~nI~f~ni~~~~~~~~i~i~~~y~~~~~~~~~~~~~~~i~nItf~nI~~~~~~-~~~~l~g---------~~- 404 (481)
...+.|+||+|+|++|.+..+++.|+.+.+ +.+.++||+|+||++.+.. .++.|.. .+
T Consensus 232 ~~~~~~v~nV~v~n~~~~~t~~GirIKt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~I~~~Y~~~~~~~~p~ 301 (362)
T 1czf_A 232 DRSNNVVKNVTIEHSTVSNSENAVRIKTISG----------ATGSVSEITYSNIVMSGISDYGVVIQQDYEDGKPTGKPT 301 (362)
T ss_dssp SSSCCEEEEEEEEEEEEEEEEEEEEEEEETT----------CCEEEEEEEEEEEEEEEEEEEEEEEEEEEETTEECSCCC
T ss_pred ccCCCCEEEEEEEeeEEECCceEEEEEEeCC----------CCceEeeEEEEeEEEECcccccEEEEEecCCCCCCCCCC
Confidence 246899999999999999999999997632 2368999999999999875 5776632 12
Q ss_pred -CCCeeeEEEEeEEEEecC
Q 011615 405 -NDPFTGICISNVTIKLTE 422 (481)
Q Consensus 405 -~~~~~~I~~~ni~i~~~~ 422 (481)
..+++||+|+||+.+.+.
T Consensus 302 ~~~~i~nI~~~ni~gt~~~ 320 (362)
T 1czf_A 302 NGVTIQDVKLESVTGSVDS 320 (362)
T ss_dssp SSEEEEEEEEEEEEEEECT
T ss_pred CCceEEEEEEEEEEEEecC
Confidence 257999999999998753
No 22
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=99.87 E-value=4.9e-20 Score=184.49 Aligned_cols=203 Identities=17% Similarity=0.224 Sum_probs=157.8
Q ss_pred eeEEEEeeccEEEEee---EEeeC--CCC-------------eEEeeccccEEEEeEEEECCCCCCCCCCcCCCCCccEE
Q 011615 194 YLIEVMFSDNVQISNL---TLIDS--PSW-------------NVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTR 255 (481)
Q Consensus 194 ~~i~~~~~~nv~I~g~---~i~ns--~~~-------------~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~ 255 (481)
.++.+.. +||+|+|. +|... ..| .+.+..|+|++|+++++.+++ .++|++..|+||+
T Consensus 61 ~~i~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~giti~nsp----~~~i~i~~~~nv~ 135 (339)
T 2iq7_A 61 PLISFSG-TNININGASGHSIDCQGSRWWDSKGSNGGKTKPKFFYAHSLKSSNIKGLNVLNTP----VQAFSINSATTLG 135 (339)
T ss_dssp CSEEEEE-ESCEEEECTTCEEECCGGGTCCSCGGGSSSCCCCCEEEEEEEEEEEECCEEECCS----SCCEEEESCEEEE
T ss_pred cEEEEEc-ccEEEEcCCCCEEECCcccccccccccCCCCCCeEEEEeeeCcEEEEEEEEEeCC----cceEEEeccCCEE
Confidence 3566655 99999997 66433 233 378899999999999999853 4789999999999
Q ss_pred EEecEEecC-CceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEeccCcCCCEEEEEEEeeEEEcCCceEEEEe
Q 011615 256 IEDNYIVSG-DDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKT 334 (481)
Q Consensus 256 I~n~~i~~g-DD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~~~~v~nI~v~n~~~~~~~~Gi~Ikt 334 (481)
|++++|.+. +|. +.+.+.+|.... .++||+|+||++... +++|+|++. +||+|+||++.+. +||.|++
T Consensus 136 i~~~~I~~~~~d~---~~~~ntDGid~~-~s~nV~I~n~~i~~g-DDciaiksg-----~nI~i~n~~~~~g-hGisiGS 204 (339)
T 2iq7_A 136 VYDVIIDNSAGDS---AGGHNTDAFDVG-SSTGVYISGANVKNQ-DDCLAINSG-----TNITFTGGTCSGG-HGLSIGS 204 (339)
T ss_dssp EESCEEECGGGGG---TTCCSCCSEEEE-SCEEEEEESCEEECS-SCSEEESSE-----EEEEEESCEEESS-CCEEEEE
T ss_pred EEEEEEECCcccc---ccCCCCCcEEEc-CcceEEEEecEEecC-CCEEEEcCC-----ccEEEEeEEEECC-ceEEECc
Confidence 999999873 222 111222232221 189999999999975 789999873 8999999999986 5899998
Q ss_pred ec-CCCceeecEEEEeeEEccceeeEEEEcccCCCCCCCCCCCCCCeEEeEEEEEEEEEccCe-eEEEec---------c
Q 011615 335 AV-GRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQ-SAKLDG---------I 403 (481)
Q Consensus 335 ~~-g~~g~v~nI~f~ni~~~~~~~~i~i~~~y~~~~~~~~~~~~~~~i~nItf~nI~~~~~~~-~~~l~g---------~ 403 (481)
.. ...+.|+||+|+|++|.+..+++.|+.+.+ +.+.++||+|+||++.+... ++.|.. .
T Consensus 205 lg~~~~~~v~nV~v~n~~~~~~~~girIkt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~ 274 (339)
T 2iq7_A 205 VGGRSDNTVKTVTISNSKIVNSDNGVRIKTVSG----------ATGSVSGVTYSGITLSNIAKYGIVIEQDYENGSPTGT 274 (339)
T ss_dssp ESSSSCCEEEEEEEEEEEEESCSEEEEEEEETT----------CCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSC
T ss_pred CCcccCCCEEEEEEEeeEEECCCcEEEEEEeCC----------CCeEEEEEEEEeEEccCcccccEEEEeecCCCCCCCC
Confidence 53 235789999999999999999999998632 23689999999999998754 776632 1
Q ss_pred C--CCCeeeEEEEeEEEEecC
Q 011615 404 R--NDPFTGICISNVTIKLTE 422 (481)
Q Consensus 404 ~--~~~~~~I~~~ni~i~~~~ 422 (481)
+ ..+++||+|+||+.+...
T Consensus 275 p~~~~~i~ni~~~ni~gt~~~ 295 (339)
T 2iq7_A 275 PTNGVPITGLTLSKITGSVAS 295 (339)
T ss_dssp CCSSSCEEEEEEEEEEEEECT
T ss_pred CCCCceEEEEEEEeEEEEeCC
Confidence 2 258999999999999763
No 23
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=99.87 E-value=4.8e-20 Score=184.44 Aligned_cols=203 Identities=15% Similarity=0.206 Sum_probs=158.1
Q ss_pred eeEEEEeeccEEEEee---EEeeCC--CC-------------eEEeeccccEEEEeEEEECCCCCCCCCCcCCCCCccEE
Q 011615 194 YLIEVMFSDNVQISNL---TLIDSP--SW-------------NVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTR 255 (481)
Q Consensus 194 ~~i~~~~~~nv~I~g~---~i~ns~--~~-------------~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~ 255 (481)
.++.+.. +||+|+|. +|.... .| .+.+..|+|++|+++++.+++ .++|++..|+||+
T Consensus 65 ~li~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp----~~~i~i~~~~nv~ 139 (339)
T 1ia5_A 65 PLISVSG-SDLTITGASGHSINGDGSRWWDGEGGNGGKTKPKFFAAHSLTNSVISGLKIVNSP----VQVFSVAGSDYLT 139 (339)
T ss_dssp CSEEEEE-ESCEEEECTTCEEECCGGGTCSSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCS----SCCEEEESCEEEE
T ss_pred cEEEEEc-CcEEEEcCCCeEEeCCCCccccccccCCCCCCCeEEEEeecCcEEEEEEEEEcCC----cceEEEecccCeE
Confidence 3566655 99999997 664432 23 388899999999999999853 4789999999999
Q ss_pred EEecEEecC-CceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEeccCcCCCEEEEEEEeeEEEcCCceEEEEe
Q 011615 256 IEDNYIVSG-DDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKT 334 (481)
Q Consensus 256 I~n~~i~~g-DD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~~~~v~nI~v~n~~~~~~~~Gi~Ikt 334 (481)
|++++|.+. +|. +.+.+.+|.... .++||+|+||++... +++|+|++. +||+|+||++.+. +||.|.+
T Consensus 140 i~~~~I~~~~~d~---~~~~ntDGid~~-~s~nV~I~n~~i~~g-DDcIaiksg-----~nI~i~n~~~~~g-hGisiGS 208 (339)
T 1ia5_A 140 LKDITIDNSDGDD---NGGHNTDAFDIG-TSTYVTISGATVYNQ-DDCVAVNSG-----ENIYFSGGYCSGG-HGLSIGS 208 (339)
T ss_dssp EESCEEECGGGTT---TTCCSCCSEEEE-SCEEEEEESCEEECS-SCSEEESSE-----EEEEEESCEEESS-SCEEEEE
T ss_pred EeeEEEECCcccc---ccCCCCCcEEec-CCceEEEEeeEEEcC-CCeEEEeCC-----eEEEEEeEEEECC-ceEEECc
Confidence 999999873 221 111122332221 289999999999975 789999873 8999999999976 6899988
Q ss_pred ecC-CCceeecEEEEeeEEccceeeEEEEcccCCCCCCCCCCCCCCeEEeEEEEEEEEEccCe-eEEEec-------cC-
Q 011615 335 AVG-RGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQ-SAKLDG-------IR- 404 (481)
Q Consensus 335 ~~g-~~g~v~nI~f~ni~~~~~~~~i~i~~~y~~~~~~~~~~~~~~~i~nItf~nI~~~~~~~-~~~l~g-------~~- 404 (481)
... ..+.|+||+|+|++|.+..+++.|+.+.. +.+.++||+|+||++.+... ++.|.. .+
T Consensus 209 ~g~~~~~~v~nV~v~n~~~~~t~~girIKt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~p~ 278 (339)
T 1ia5_A 209 VGGRSDNTVKNVTFVDSTIINSDNGVRIKTNID----------TTGSVSDVTYKDITLTSIAKYGIVVQQNYGDTSSTPT 278 (339)
T ss_dssp ECSSSCCEEEEEEEEEEEEESCSEEEEEEEETT----------CCCEEEEEEEEEEEEEEESSEEEEEEEEETCTTSCCC
T ss_pred CCcccCCCEEEEEEEeeEEECCCcEEEEEEeCC----------CCcEEEeeEEEEEEEECcccccEEEEccCCCCCCCCc
Confidence 532 35789999999999999999999997632 23689999999999998864 777643 12
Q ss_pred -CCCeeeEEEEeEEEEecC
Q 011615 405 -NDPFTGICISNVTIKLTE 422 (481)
Q Consensus 405 -~~~~~~I~~~ni~i~~~~ 422 (481)
..+++||+|+||+.+...
T Consensus 279 ~~~~i~ni~~~ni~gt~~~ 297 (339)
T 1ia5_A 279 TGVPITDFVLDNVHGSVVS 297 (339)
T ss_dssp SSSCEEEEEEEEEEEEECT
T ss_pred CCceEEEEEEEeEEEEeCC
Confidence 368999999999998753
No 24
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=99.86 E-value=6.8e-20 Score=196.68 Aligned_cols=249 Identities=13% Similarity=0.137 Sum_probs=196.4
Q ss_pred eeEEEeceeceEEEccceeeeCCCchhhhhccccCCCCCCCeeEEEEeeccEEEEeeEEee--CC-CCeEEeeccccEEE
Q 011615 153 SLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLID--SP-SWNVHPVYSSNVLI 229 (481)
Q Consensus 153 ~~i~~~~~~ni~I~G~~G~idG~g~~ww~~~~~~~~~~~rp~~i~~~~~~nv~I~g~~i~n--s~-~~~i~~~~~~nv~i 229 (481)
.+|.+.+++|++|+|- +|... ..+.+.+.+|+|++|+++++.+ ++ ..+|++..|+||+|
T Consensus 332 ~~i~~~~~~nv~I~gi--ti~ns----------------~~~~i~~~~~~nv~i~~v~i~~~~~~NtDGidi~~s~nV~I 393 (608)
T 2uvf_A 332 SLMTLRGVENVYLAGF--TVRNP----------------AFHGIMNLENHNVVANGLIHQTYDANNGDGIEFGNSQNVMV 393 (608)
T ss_dssp CSEEEESEEEEEEESC--EEECC----------------SSCSEEEESCEEEEEESCEEECTTCTTCCSEEEESCEEEEE
T ss_pred eEEEEEeeeeEEEeCc--EEecC----------------CCCEEEEecCCCEEEeeEEEcCCCCCCCCeEEecCCceEEE
Confidence 4788999999999994 44321 1236899999999999999865 22 46899999999999
Q ss_pred EeEEEECCCC------CCCCCCcCCCCCccEEEEecEEecCCceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceE
Q 011615 230 QGLTIRAPID------SPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAI 303 (481)
Q Consensus 230 ~~~~i~~~~~------~~n~DGI~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi 303 (481)
+|++|.+.++ +.+.||++...|+||+|+||++..++++++|+++. ....+||+|+||+|.++ .+|+
T Consensus 394 ~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~~-------~~~v~nI~v~n~~~~~t-~~Gi 465 (608)
T 2uvf_A 394 FNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHT-------GAWIEDILAENNVMYLT-DIGL 465 (608)
T ss_dssp ESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESCC-------TTCEEEEEEESCEEESC-SEEE
T ss_pred EeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEcccC-------CCCEEEEEEEeEEEECC-CceE
Confidence 9999998764 45678888778999999999999999998888752 23489999999999996 6899
Q ss_pred EeccC--cCCCEEEEEEEeeEEEcC-CceEEEEeecC------------CCceeecEEEEeeEEccce---eeEEEEccc
Q 011615 304 ALGSE--MSGGIKDVRAEDITAINT-QSGVRIKTAVG------------RGAYVKEIYVRRMTMKTMK---YVFWMTGDY 365 (481)
Q Consensus 304 sIGs~--~~~~v~nI~v~n~~~~~~-~~Gi~Ikt~~g------------~~g~v~nI~f~ni~~~~~~---~~i~i~~~y 365 (481)
.|++. ..+.++||+|+|++|.+. .++|.|+.... ..+.+++|+|+||+++++. .++.|...
T Consensus 466 rIKt~~g~gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt~~~i~i~g~- 544 (608)
T 2uvf_A 466 RAKSTSTIGGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGKNPSIEIKGD- 544 (608)
T ss_dssp EEEEETTTCCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSSSCSEEEECB-
T ss_pred EEeeecCCCceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeeceEEeEEEEEE-
Confidence 99874 346799999999999998 59999987653 1356999999999999875 46777643
Q ss_pred CCCCCCCCCCCCCCeEEeEEEEEEEEEccCeeEEEeccCCCCeeeEEEEeEEEEecCCCCccceEEeeeeccC-CcccCc
Q 011615 366 GSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDGIRNDPFTGICISNVTIKLTEKPKELQWNCTNIQGIT-SRVTPQ 444 (481)
Q Consensus 366 ~~~~~~~~~~~~~~~i~nItf~nI~~~~~~~~~~l~g~~~~~~~~I~~~ni~i~~~~~~~~~~~~c~nv~g~~-~~~~p~ 444 (481)
+ +....++||+|+||+++... +..+. .|++++|+||.+...+ ....|.|+++.+.. .++.|.
T Consensus 545 ~---------~~~~p~~ni~~~nv~i~~~~-~~~i~-----~~~~~~~~nv~i~~~~--~~~~~~~~~v~~~~~~~v~~~ 607 (608)
T 2uvf_A 545 T---------ANKAWHRLVHVNNVQLNNVT-PTAIS-----DLRDSEFNKVTFTELR--GDTPWHFSEVKNVKVDGKPVA 607 (608)
T ss_dssp G---------GGTBCEEEEEEEEEEEESCC-CCEEE-----SEESCEEEEEEEESCS--SSCSCCEESCBSCCBTTCCC-
T ss_pred c---------CCCCccccEEEEeEEEEccC-ceeEE-----eccCceEEeEEEeCCC--CCccEEEEeeeceEEcceEeC
Confidence 1 12247999999999998764 44444 5789999999997542 23469999999976 577775
Q ss_pred c
Q 011615 445 A 445 (481)
Q Consensus 445 ~ 445 (481)
|
T Consensus 608 p 608 (608)
T 2uvf_A 608 P 608 (608)
T ss_dssp -
T ss_pred C
Confidence 4
No 25
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.86 E-value=1.8e-19 Score=180.12 Aligned_cols=193 Identities=17% Similarity=0.220 Sum_probs=155.9
Q ss_pred eEEEEeeccEEEEee---EEeeCC--CC-------------eEEeeccccEEEEeEEEECCCCCCCCCCcCCCCCccEEE
Q 011615 195 LIEVMFSDNVQISNL---TLIDSP--SW-------------NVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRI 256 (481)
Q Consensus 195 ~i~~~~~~nv~I~g~---~i~ns~--~~-------------~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I 256 (481)
++.+ ..+||+|.|. +|.... .| .+.+..|+|++|+++++.+++ ..+|++. |+||+|
T Consensus 62 li~~-~~~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp----~~~i~i~-~~nv~i 135 (336)
T 1nhc_A 62 LIRF-GGKDLTVTMADGAVIDGDGSRWWDSKGTNGGKTKPKFMYIHDVEDSTFKGINIKNTP----VQAISVQ-ATNVHL 135 (336)
T ss_dssp SEEC-CEESCEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCS----SCCEEEE-EEEEEE
T ss_pred EEEE-ecCCEEEEcCCCeEEECCccccccccCcCCCCCCceEEEEeeeCcEEEEEEEEEeCC----ccEEEEE-eCCEEE
Confidence 4555 4599999997 564322 23 378899999999999999853 3479999 999999
Q ss_pred EecEEecC---------CceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEeccCcCCCEEEEEEEeeEEEcCC
Q 011615 257 EDNYIVSG---------DDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQ 327 (481)
Q Consensus 257 ~n~~i~~g---------DD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~~~~v~nI~v~n~~~~~~~ 327 (481)
++++|.+. .|+|.+.+ ++||+|+||++... +++|+|++. +||+|+||++.+.
T Consensus 136 ~~~~I~~~~~d~~~~~ntDGidi~~------------s~nV~I~n~~i~~g-DDciaiksg-----~nI~i~n~~~~~g- 196 (336)
T 1nhc_A 136 NDFTIDNSDGDDNGGHNTDGFDISE------------STGVYISGATVKNQ-DDCIAINSG-----ESISFTGGTCSGG- 196 (336)
T ss_dssp ESCEEECTTHHHHTCCSCCSEEECS------------CEEEEEESCEEESS-SEEEEESSE-----EEEEEESCEEESS-
T ss_pred EEEEEECCCcccccCCCCCcEEecC------------CCeEEEEeCEEEcC-CCEEEEeCC-----eEEEEEeEEEECC-
Confidence 99999874 35555544 89999999999986 789999873 8999999999976
Q ss_pred ceEEEEeecC-CCceeecEEEEeeEEccceeeEEEEcccCCCCCCCCCCCCCCeEEeEEEEEEEEEccCe-eEEEe---c
Q 011615 328 SGVRIKTAVG-RGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQ-SAKLD---G 402 (481)
Q Consensus 328 ~Gi~Ikt~~g-~~g~v~nI~f~ni~~~~~~~~i~i~~~y~~~~~~~~~~~~~~~i~nItf~nI~~~~~~~-~~~l~---g 402 (481)
+||.|.+... ..+.|+||+|+|++|.+..+++.|+.+.+ +.+.++||+|+||++.+... ++.|. +
T Consensus 197 hGisiGS~g~~~~~~v~nV~v~n~~~~~t~~girIkt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~ 266 (336)
T 1nhc_A 197 HGLSIGSVGGRDDNTVKNVTISDSTVSNSANGVRIKTIYK----------ETGDVSEITYSNIQLSGITDYGIVIEQDYE 266 (336)
T ss_dssp SEEEEEEESSSSCCEEEEEEEEEEEEESCSEEEEEEEETT----------CCCEEEEEEEEEEEEEEESSEEEEEEEEEE
T ss_pred cCceEccCccccCCCEEEEEEEeeEEECCCcEEEEEEECC----------CCCEEeeeEEeeEEeeccccccEEEEeecC
Confidence 6899998532 35789999999999999999999997632 23689999999999999854 77663 2
Q ss_pred c------C--CCCeeeEEEEeEEEEecC
Q 011615 403 I------R--NDPFTGICISNVTIKLTE 422 (481)
Q Consensus 403 ~------~--~~~~~~I~~~ni~i~~~~ 422 (481)
. + ..+++||+|+||+.+...
T Consensus 267 ~~~~~~~p~~~~~i~~i~~~ni~gt~~~ 294 (336)
T 1nhc_A 267 NGSPTGTPSTGIPITDVTVDGVTGTLED 294 (336)
T ss_dssp TTEECSCCCSSSCEEEEEEEEEEEEECT
T ss_pred CCCCCCCCCCCceEEEEEEEeEEEEeCC
Confidence 1 2 358999999999998763
No 26
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=99.84 E-value=6.2e-19 Score=176.98 Aligned_cols=206 Identities=12% Similarity=0.164 Sum_probs=155.3
Q ss_pred eeEEEEeeccEEEEe---eEEeeCC--CC--------------eEEe-e-ccccEEEEeEEEECCCCCCCCCCcCCCCCc
Q 011615 194 YLIEVMFSDNVQISN---LTLIDSP--SW--------------NVHP-V-YSSNVLIQGLTIRAPIDSPNTDGINPDSCT 252 (481)
Q Consensus 194 ~~i~~~~~~nv~I~g---~~i~ns~--~~--------------~i~~-~-~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~ 252 (481)
.+|.+ +.+||+|.| -+|.... .| .+.+ . .|+|++|+++++.+++ ..+|++..|+
T Consensus 62 ~~i~~-~~~ni~I~G~~~G~IdG~G~~ww~~~~~~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp----~~~i~i~~~~ 136 (349)
T 1hg8_A 62 NPIVI-SGSNITITGASGHVIDGNGQAYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNLNIQNWP----VHCFDITGSS 136 (349)
T ss_dssp CSEEE-EEESCEEEECTTCEEECCGGGTCCSCTTCTTSCCCCSEEEEEEEEESSEEEESCEEECCS----SEEEEEESCE
T ss_pred ceEEE-ECccEEEEecCCCEEcCCcchhhhcccccCCCCCCCeEEEEeecCcCcEEEEEEEEEcCC----CceEEEeccC
Confidence 35666 459999999 5664332 11 4667 6 7889999999999853 4679999999
Q ss_pred cEEEEecEEecC-Cceeee-----cCCCCccCcccCCceeeEEEEEEEEeCCCCceEEeccCcCCCEEEEEEEeeEEEcC
Q 011615 253 NTRIEDNYIVSG-DDCVAV-----KSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINT 326 (481)
Q Consensus 253 nV~I~n~~i~~g-DD~iai-----~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~~~~v~nI~v~n~~~~~~ 326 (481)
||+|++++|.+. +|...+ +.+.+.+|.... .++||+|+||++..+ +++|+|++. +||+|+||++.+.
T Consensus 137 nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~-~s~nV~I~n~~i~~g-DDcIaiksg-----~nI~i~n~~~~~g 209 (349)
T 1hg8_A 137 QLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDIS-SSDHVTLDNNHVYNQ-DDCVAVTSG-----TNIVVSNMYCSGG 209 (349)
T ss_dssp EEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEE-SCEEEEEEEEEEECS-SCSEEESSE-----EEEEEEEEEEESS
T ss_pred CEEEEEEEEECCCCccccccccccccCCCCCeEEEc-cccEEEEEeeEEecC-CCeEEeeCC-----eEEEEEeEEEeCC
Confidence 999999999862 221100 011223333322 289999999999975 789999973 8999999999876
Q ss_pred CceEEEEee-cCCCceeecEEEEeeEEccceeeEEEEcccCCCCCCCCCCCCCCeEEeEEEEEEEEEccC-eeEEEec--
Q 011615 327 QSGVRIKTA-VGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVT-QSAKLDG-- 402 (481)
Q Consensus 327 ~~Gi~Ikt~-~g~~g~v~nI~f~ni~~~~~~~~i~i~~~y~~~~~~~~~~~~~~~i~nItf~nI~~~~~~-~~~~l~g-- 402 (481)
+||.|.+. ....+.|+||+|+|++|.+..+++.|+.+.. +.+.++||+|+||++.+.. .++.|..
T Consensus 210 -hGisiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~i~~~Y 278 (349)
T 1hg8_A 210 -HGLSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSNSG----------ATGTINNVTYQNIALTNISTYGVDVQQDY 278 (349)
T ss_dssp -CCEEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEETT----------CCEEEEEEEEEEEEEEEEEEEEEEEEEEE
T ss_pred -cceEEccccccccCCEEEEEEEEEEEECCCcEEEEEecCC----------CCccccceEEEEEEEEccccccEEEEeec
Confidence 68999986 2235889999999999999999999997622 2368999999999999985 5776632
Q ss_pred -c------C--CCCeeeEEEEeEEEEecC
Q 011615 403 -I------R--NDPFTGICISNVTIKLTE 422 (481)
Q Consensus 403 -~------~--~~~~~~I~~~ni~i~~~~ 422 (481)
. + ..+++||+|+||+.+...
T Consensus 279 ~~~~~~~~p~~~~~i~~I~~~ni~gt~~~ 307 (349)
T 1hg8_A 279 LNGGPTGKPTNGVKISNIKFIKVTGTVAS 307 (349)
T ss_dssp CSSSBCSCCCSSEEEEEEEEEEEEEEECT
T ss_pred cCCCCCCcccCCceEEEEEEEeEEEEeCC
Confidence 1 2 146999999999998753
No 27
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=99.83 E-value=1.3e-19 Score=180.80 Aligned_cols=197 Identities=13% Similarity=0.222 Sum_probs=156.5
Q ss_pred eEEEEeeccEEEEee--EEeeCC--CC-------------eEEeeccccEEEEeEEEECCCCCCCCCCcCCCCCcc-EEE
Q 011615 195 LIEVMFSDNVQISNL--TLIDSP--SW-------------NVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTN-TRI 256 (481)
Q Consensus 195 ~i~~~~~~nv~I~g~--~i~ns~--~~-------------~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~n-V~I 256 (481)
++.+. .+|++|.|- +|...+ .| .+.+..|+ ++|+++++.+++ .+.+++..|+| |+|
T Consensus 60 ~i~~~-~~ni~I~G~~G~idG~G~~ww~~~~~~~~~~rP~~i~~~~~~-v~i~giti~nsp----~~~i~i~~~~n~v~i 133 (335)
T 1k5c_A 60 LFTID-GTGINFVGADHIFDGNGALYWDGKGTNNGTHKPHPFLKIKGS-GTYKKFEVLNSP----AQAISVGPTDAHLTL 133 (335)
T ss_dssp SEEEE-EEEEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCSEEEEEE-EEEESCEEESCS----SCCEEEEEEEEEEEE
T ss_pred EEEEE-ccCEEEEeCccEEcCChhHhhhcccccCCCCCCeEEEEeceE-EEEEEEEEECCC----cceEEEEccCCeEEE
Confidence 56665 699999993 553221 12 26788999 999999999954 35699999999 999
Q ss_pred EecEEecC-CceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEeccCcCCCEEEEEEEeeEEEcCCceEEEEee
Q 011615 257 EDNYIVSG-DDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTA 335 (481)
Q Consensus 257 ~n~~i~~g-DD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~~~~v~nI~v~n~~~~~~~~Gi~Ikt~ 335 (481)
+|++|.+. +|+.. ...+.+|... .++||+|+||++..+ +++|+|++. +||+|+||++... +||.|++.
T Consensus 134 ~~v~I~~~~~d~~~--~~~NtDGidi--~s~nV~I~n~~i~~g-DDcIaiksg-----~nI~i~n~~~~~g-hGisIGS~ 202 (335)
T 1k5c_A 134 DGITVDDFAGDTKN--LGHNTDGFDV--SANNVTIQNCIVKNQ-DDCIAINDG-----NNIRFENNQCSGG-HGISIGSI 202 (335)
T ss_dssp ESCEEECGGGGGGG--CCCSCCSEEE--ECSSEEEESCEEESS-SCSEEEEEE-----EEEEEESCEEESS-CCEEEEEE
T ss_pred EEEEEECCCCcccc--cCCCCCeEcc--cCCeEEEEeeEEEcC-CCEEEeeCC-----eeEEEEEEEEECC-ccCeEeec
Confidence 99999985 45411 0334566655 599999999999986 789999983 8999999999986 78999986
Q ss_pred cCCCceeecEEEEeeEEccceeeEEEEcccCCCCCCCCCCCCC-CeEEeEEEEEEEEEccC-eeEEEec-------cC--
Q 011615 336 VGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKAL-PTVTGINYRDMVADNVT-QSAKLDG-------IR-- 404 (481)
Q Consensus 336 ~g~~g~v~nI~f~ni~~~~~~~~i~i~~~y~~~~~~~~~~~~~-~~i~nItf~nI~~~~~~-~~~~l~g-------~~-- 404 (481)
.. .+.|+||+|+|++|.+..+++.|+.+.+ +. +.++||+|+||+++++. .++.|.. .+
T Consensus 203 g~-~~~v~nV~v~n~~~~~t~~girIKt~~g----------~~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~~~~~p~~ 271 (335)
T 1k5c_A 203 AT-GKHVSNVVIKGNTVTRSMYGVRIKAQRT----------ATSASVSGVTYDANTISGIAKYGVLISQSYPDDVGNPGT 271 (335)
T ss_dssp CT-TCEEEEEEEESCEEEEEEEEEEEEEETT----------CCSCEEEEEEEESCEEEEEEEEEEEEEEEETSSSSSCCS
T ss_pred cC-CCCEEEEEEEeeEEECCCceEEEEEeCC----------CCcceEeeeEEEEEEEEccccccEEEEeeCCCCCCCCCC
Confidence 32 5899999999999999999999997632 22 68999999999999985 5777652 22
Q ss_pred CCCeeeEEEEeEEEE
Q 011615 405 NDPFTGICISNVTIK 419 (481)
Q Consensus 405 ~~~~~~I~~~ni~i~ 419 (481)
..+++||+|+||++.
T Consensus 272 ~~~i~nI~~~nI~~~ 286 (335)
T 1k5c_A 272 GAPFSDVNFTGGATT 286 (335)
T ss_dssp SSCEEEEEECSSCEE
T ss_pred CceEEEEEEEEEEEe
Confidence 468999999999944
No 28
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=99.83 E-value=2e-18 Score=177.50 Aligned_cols=173 Identities=13% Similarity=0.187 Sum_probs=143.7
Q ss_pred eEEeeccccEEEEeEEEECCCCCCCCCCcCCCCCccEEEEecEEecCCceeeecCCCCccCcccCCceeeEEEEEEEEeC
Q 011615 218 NVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICIS 297 (481)
Q Consensus 218 ~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~ 297 (481)
.+.+..|+|++|++++|.++. .++|++..|+||+|+|++|.++|. .+.+|..... +||+|+||++..
T Consensus 129 ~i~~~~~~nv~I~~iti~nsp----~~~i~i~~~~nv~I~n~~I~~~d~-------~ntDGidi~~--~nV~I~n~~i~~ 195 (422)
T 1rmg_A 129 ILRLTDVTHFSVHDIILVDAP----AFHFTMDTCSDGEVYNMAIRGGNE-------GGLDGIDVWG--SNIWVHDVEVTN 195 (422)
T ss_dssp EEEEEEEEEEEEEEEEEECCS----SCSEEEEEEEEEEEEEEEEECCSS-------TTCCSEEEEE--EEEEEEEEEEES
T ss_pred EEEEcccceEEEECeEEECCC----ceEEEEeCcCCEEEEeEEEECCCC-------CCCccEeecC--CeEEEEeeEEeC
Confidence 578899999999999999843 468999999999999999998431 1234444433 899999999998
Q ss_pred CCCceEEeccCcCCCEEEEEEEeeEEEcCCceEEEEeecCCCceeecEEEEeeEEccceeeEEEEcccCCCCCCCCCCCC
Q 011615 298 PDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKA 377 (481)
Q Consensus 298 ~~~~gisIGs~~~~~v~nI~v~n~~~~~~~~Gi~Ikt~~g~~g~v~nI~f~ni~~~~~~~~i~i~~~y~~~~~~~~~~~~ 377 (481)
. ++||+|++ +.+||+|+||++.+. +||+|++. +.++.|+||+|+|++|.+..++|.|+.. . .
T Consensus 196 g-DD~Iai~s----~~~nI~I~n~~~~~~-~GisIGS~-g~~~~v~nV~v~n~~~~~~~~Gi~Ikt~-~--------g-- 257 (422)
T 1rmg_A 196 K-DECVTVKS----PANNILVESIYCNWS-GGCAMGSL-GADTDVTDIVYRNVYTWSSNQMYMIKSN-G--------G-- 257 (422)
T ss_dssp S-SEEEEEEE----EEEEEEEEEEEEESS-SEEEEEEE-CTTEEEEEEEEEEEEEESSSCSEEEEEB-B--------C--
T ss_pred C-CCeEEeCC----CCcCEEEEeEEEcCC-cceeeccc-CCCCcEEEEEEEeEEEeccceEEEEEec-C--------C--
Confidence 6 78999997 689999999998876 69999985 4457899999999999999999999873 1 1
Q ss_pred CCeEEeEEEEEEEEEccCeeEEEec---------cCCCCeeeEEEEeEEEEec
Q 011615 378 LPTVTGINYRDMVADNVTQSAKLDG---------IRNDPFTGICISNVTIKLT 421 (481)
Q Consensus 378 ~~~i~nItf~nI~~~~~~~~~~l~g---------~~~~~~~~I~~~ni~i~~~ 421 (481)
.+.++||+|+||++.++..++.+.. ....+++||+|+||+.+..
T Consensus 258 ~G~v~nI~~~NI~~~~v~~~i~i~~~y~~~~~~~~~~~~i~nI~~~nI~gt~~ 310 (422)
T 1rmg_A 258 SGTVSNVLLENFIGHGNAYSLDIDGYWSSMTAVAGDGVQLNNITVKNWKGTEA 310 (422)
T ss_dssp CEEEEEEEEEEEEEEEESCSEEEETBCTTSCCBSSSCCEEEEEEEEEEEEEES
T ss_pred CcEEEEEEEEeEEEECccccEEEEeeccCCCcccCCCceEEEEEEEeEEEEec
Confidence 1589999999999999888887753 1346899999999999874
No 29
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=99.81 E-value=3e-18 Score=174.18 Aligned_cols=198 Identities=15% Similarity=0.145 Sum_probs=161.7
Q ss_pred CeeEEEEeeccEEEEee-EEeeCC----------CC-----------------eEEeeccccEEEEeEEEECCCCCCCCC
Q 011615 193 PYLIEVMFSDNVQISNL-TLIDSP----------SW-----------------NVHPVYSSNVLIQGLTIRAPIDSPNTD 244 (481)
Q Consensus 193 p~~i~~~~~~nv~I~g~-~i~ns~----------~~-----------------~i~~~~~~nv~i~~~~i~~~~~~~n~D 244 (481)
..+|.+.+.+||+|.|- +|.... .| .+.+..|+|++|+++++.+++ ..
T Consensus 100 ~~~I~~~~~~ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~iti~nsp----~~ 175 (376)
T 1bhe_A 100 DAFITAVSTTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSP----NF 175 (376)
T ss_dssp CCSEEEESCBSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEESCEEEEEEEEEEECCS----SC
T ss_pred ccEEEEECCEeEEEEeCEEEECCCCcccCCCccccccccccccccCccCCCCeEEEEEcceEEEEEeEEEECCC----cE
Confidence 35788999999999997 554332 12 367899999999999999953 35
Q ss_pred CcCCCCCccEEEEecEEec-----CCceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEeccCc-CCCEEEEEE
Q 011615 245 GINPDSCTNTRIEDNYIVS-----GDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEM-SGGIKDVRA 318 (481)
Q Consensus 245 GI~~~~s~nV~I~n~~i~~-----gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~-~~~v~nI~v 318 (481)
++++..|++|+|++++|.+ .-|+|.+.+ ++||+|+||++..+ +++|+|++.. ....+||+|
T Consensus 176 ~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~------------s~nV~I~n~~i~~g-DDcIaiks~~~~~~s~nI~I 242 (376)
T 1bhe_A 176 HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMS------------SKNITIAYSNIATG-DDNVAIKAYKGRAETRNISI 242 (376)
T ss_dssp SEEEESCEEEEEEEEEEECCTTCSSCCSEEEES------------CEEEEEESCEEECS-SCSEEEEECTTSCCEEEEEE
T ss_pred EEEEeCCCcEEEEeEEEECCCCCCCCceEeecC------------CceEEEEeCEEecC-CCeEEEcccCCCCCceEEEE
Confidence 6888899999999999987 356777765 89999999999986 7899999742 247999999
Q ss_pred EeeEEEcCCceEEEEeecCCCceeecEEEEeeEEccceeeEEEEcccCCCCCCCCCCCCCCeEEeEEEEEEEEEccCeeE
Q 011615 319 EDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSA 398 (481)
Q Consensus 319 ~n~~~~~~~~Gi~Ikt~~g~~g~v~nI~f~ni~~~~~~~~i~i~~~y~~~~~~~~~~~~~~~i~nItf~nI~~~~~~~~~ 398 (481)
+||++.. .+|+.|.+... .|+||+|+|+++.+..+++.|+.+.. +.+.++||+|+||++.+...++
T Consensus 243 ~n~~~~~-ghGisiGSe~~---~v~nV~v~n~~~~~t~~GirIKt~~g----------~~G~v~ni~f~ni~~~~v~~~i 308 (376)
T 1bhe_A 243 LHNDFGT-GHGMSIGSETM---GVYNVTVDDLKMNGTTNGLRIKSDKS----------AAGVVNGVRYSNVVMKNVAKPI 308 (376)
T ss_dssp EEEEECS-SSCEEEEEEES---SEEEEEEEEEEEESCSEEEEEECCTT----------TCCEEEEEEEEEEEEESCSEEE
T ss_pred EeeEEEc-cccEEeccCCc---cEeeEEEEeeEEeCCCcEEEEEEecC----------CCceEeeEEEEeEEEeCCCceE
Confidence 9999986 57899988652 79999999999999999999997522 3368999999999999998888
Q ss_pred EEecc-------CCCCeeeEEEEeEEEEec
Q 011615 399 KLDGI-------RNDPFTGICISNVTIKLT 421 (481)
Q Consensus 399 ~l~g~-------~~~~~~~I~~~ni~i~~~ 421 (481)
.|... ....++||+|+||+.+..
T Consensus 309 ~i~~~y~~~~~~~~~~i~ni~~~ni~gt~~ 338 (376)
T 1bhe_A 309 VIDTVYEKKEGSNVPDWSDITFKDVTSETK 338 (376)
T ss_dssp EEETTSSCCCCCCCCEEEEEEEEEEEECSC
T ss_pred EEEeeccCCCCCcCcEEEEEEEEEEEEEec
Confidence 87421 123599999999998753
No 30
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=99.68 E-value=4.2e-15 Score=156.84 Aligned_cols=251 Identities=10% Similarity=0.067 Sum_probs=169.3
Q ss_pred CCcE-EEeCCCcceeeeEEeccceeEEEccCcEEEecCCCCCCCCCCCCCCCCCCCCCCC-CCceeeEEEeceeceEEEc
Q 011615 90 GGAQ-LIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLLPPLPSYGRGRDEPG-GRFSSLIFGTNLTDVVVTG 167 (481)
Q Consensus 90 ~g~~-v~iP~G~Yl~~~i~l~s~~~l~l~~ga~i~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~i~~~~~~ni~I~G 167 (481)
.+-+ |++++|.++.+.+.+.+...|.+...|+|-+... .-|.... ..+..-..-+. -.+..++.+.+++||+|+|
T Consensus 263 Snvt~L~L~~GA~l~g~i~~~~~~nv~ItG~GtIDG~G~-~ww~~~~--~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~G 339 (574)
T 1ogo_X 263 SNTYWVYLAPGAYVKGAIEYFTKQNFYATGHGILSGENY-VYQANAG--DNYIAVKSDSTSLRMWWHNNLGGGQTWYCVG 339 (574)
T ss_dssp TTCCEEEECTTEEEESCEEECCSSCEEEESSCEEECTTS-CTTCBTT--TTTBSCCCTTTBCCSEEECSCCSSEEEEEES
T ss_pred CCCceEEecCCcEEEccEEEeCceeEEEEeCEEEeCCCc-ccccccc--cccccccCCcceEEEEeccccCCceeEEEEC
Confidence 3456 8999999998999998877888888898865532 1221100 00000000000 0011122234899999999
Q ss_pred cceeeeCCCchhhhhccccCCCCCCCeeEEEEeeccE--EEEeeEEeeCCCC---eEEeeccccEEEEeEEEECCCCCCC
Q 011615 168 GNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNV--QISNLTLIDSPSW---NVHPVYSSNVLIQGLTIRAPIDSPN 242 (481)
Q Consensus 168 ~~G~idG~g~~ww~~~~~~~~~~~rp~~i~~~~~~nv--~I~g~~i~ns~~~---~i~~~~~~nv~i~~~~i~~~~~~~n 242 (481)
- ..++. .. | .+++..|+|| +|+++++.+++.| +|++. +||+|+|++|.+ .
T Consensus 340 i-ti~NS--p~-w--------------~i~~~~c~nV~~~I~nv~i~~~~~~nTDGIDi~--~NV~I~nc~I~~-----g 394 (574)
T 1ogo_X 340 P-TINAP--PF-N--------------TMDFNGNSGISSQISDYKQVGAFFFQTDGPEIY--PNSVVHDVFWHV-----N 394 (574)
T ss_dssp C-EEECC--SS-C--------------SEEECSSSCEEEEEEEEEEECCCSTTCCCCBCC--TTCEEEEEEEEE-----S
T ss_pred e-EEECC--CC-c--------------EEeecCCCChhhEEEeeEeeCCCCCCCccCccc--CCEEEEeeEEEC-----C
Confidence 5 44442 22 2 4788999999 9999999875444 68887 999999999998 4
Q ss_pred CCCcCCCCCccEEEEecEEecCCc-e-eeecCCCCccCcccCCceeeEEEEEEEEeCCCC-------ceEEeccCc----
Q 011615 243 TDGINPDSCTNTRIEDNYIVSGDD-C-VAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS-------AAIALGSEM---- 309 (481)
Q Consensus 243 ~DGI~~~~s~nV~I~n~~i~~gDD-~-iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~-------~gisIGs~~---- 309 (481)
.|+|-+.+ +||+|+||++..+.. + |++++. ....+||+|+||++..... .+..+|++.
T Consensus 395 DDcIaIks-~NI~I~nc~i~~g~g~g~IsIGS~--------~g~V~NV~v~N~~i~~~~~~~~~~~~~g~iiGs~~~y~~ 465 (574)
T 1ogo_X 395 DDAIKIYY-SGASVSRATIWKCHNDPIIQMGWT--------SRDISGVTIDTLNVIHTRYIKSETVVPSAIIGASPFYAS 465 (574)
T ss_dssp SCSEECCS-TTCEEEEEEEEECSSSCSEECCSS--------CCCEEEEEEEEEEEEECCCSSCCTTTTCEEEEECCCSSS
T ss_pred CCEEEECC-ccEEEEeEEEECCCCCceEEEcCC--------CCcEEEEEEEeEEEECCcccceeccccceeecccccccc
Confidence 58898865 999999999998654 4 788762 2348999999999987532 134444431
Q ss_pred ------CCCEEEEEEEeeEEEcCCceEEEEeecCCCceeecEEEEeeEEcc------ce-eeEEEEcccCCCCCCCCCCC
Q 011615 310 ------SGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKT------MK-YVFWMTGDYGSHPDPGFDPK 376 (481)
Q Consensus 310 ------~~~v~nI~v~n~~~~~~~~Gi~Ikt~~g~~g~v~nI~f~ni~~~~------~~-~~i~i~~~y~~~~~~~~~~~ 376 (481)
..++ ||+|+|+++.+...++ |...+ .+.|+||+|+||++++ .. .+..+.+. +
T Consensus 466 ~~~~~~g~gV-NI~f~NI~~~~v~~~i-i~i~p--~~~I~nI~~~NI~i~g~~~~~~~~~~~~~i~G~----------~- 530 (574)
T 1ogo_X 466 GMSPDSRKSI-SMTVSNVVCEGLCPSL-FRITP--LQNYKNFVVKNVAFPDGLQTNSIGTGESIIPAA----------S- 530 (574)
T ss_dssp SCCCEEEEEE-EEEEEEEEECSSBCEE-EEECC--SEEEEEEEEEEEEETTCBCCSTTCTTCEEECCC----------T-
T ss_pred ccccCCCceE-EEEEEeEEEEceeEee-EEECC--CCCEEEEEEEeEEEeCccccccccccceeEecC----------C-
Confidence 1128 9999999999988875 54444 4679999999999886 11 11112111 1
Q ss_pred CCCeEEeEEEEEEEEEcc
Q 011615 377 ALPTVTGINYRDMVADNV 394 (481)
Q Consensus 377 ~~~~i~nItf~nI~~~~~ 394 (481)
..++||+|+||++...
T Consensus 531 --~~v~nI~~~NV~i~g~ 546 (574)
T 1ogo_X 531 --GLTMGLAISAWTIGGQ 546 (574)
T ss_dssp --TCCEEEEEEEEEETTE
T ss_pred --CccceEEEEeEEEeCE
Confidence 3689999999998643
No 31
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=99.65 E-value=2.5e-15 Score=158.60 Aligned_cols=199 Identities=13% Similarity=0.155 Sum_probs=144.0
Q ss_pred EEEE-eeccEEEEeeEEeeCCC-------------------CeEEe------eccccEEEEeEEEECCCCCCCCCCcCCC
Q 011615 196 IEVM-FSDNVQISNLTLIDSPS-------------------WNVHP------VYSSNVLIQGLTIRAPIDSPNTDGINPD 249 (481)
Q Consensus 196 i~~~-~~~nv~I~g~~i~ns~~-------------------~~i~~------~~~~nv~i~~~~i~~~~~~~n~DGI~~~ 249 (481)
+.+. +++|++|.|-.+.+..+ ..+.+ .+|+|++|+++++.+++. .-+++.
T Consensus 238 ~~~~~~~~nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~~rp~~i~~~~~~~~~~c~nV~I~Giti~Nsp~----w~i~i~ 313 (549)
T 1x0c_A 238 VEFLSTASEVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLGNSSQTFVLNGVTVSAPPF----NSMDWS 313 (549)
T ss_dssp EEECCCSSEEEEESSCEEECTTSCTTEEGGGTTEECGGGCSCCCCSEEEECCSSCEEEEEESCEEECCSS----CSEEEE
T ss_pred EEEecCceeEEEEeeEEEECCCceecccCcccccccccCCCceEEEeeccccCCceEEEEECcEEECCCc----eeEEee
Confidence 3455 89999999977766543 12566 999999999999999642 336633
Q ss_pred -CC-cc--EEEEecEEecCCceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEeccCcCCCEEEEEEEeeEEEc
Q 011615 250 -SC-TN--TRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN 325 (481)
Q Consensus 250 -~s-~n--V~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~~~~v~nI~v~n~~~~~ 325 (481)
.| ++ |+|+++.+.+.. +++.+|.... +||+|+||++..+ +++|+|++ +||+|+||+|..
T Consensus 314 ~~~~~ni~V~I~n~~i~~~~-------~~NTDGidi~---~nV~I~n~~i~~g-DDcIaIks------~NI~I~n~~~~~ 376 (549)
T 1x0c_A 314 GNSLDLITCRVDDYKQVGAF-------YGQTDGLEMY---PGTILQDVFYHTD-DDGLKMYY------SNVTARNIVMWK 376 (549)
T ss_dssp CSCGGGEEEEEEEEEEECCC-------BTTCCCCBCC---TTCEEEEEEEEES-SCCEECCS------SSEEEEEEEEEE
T ss_pred ccCCCCCeEEEEeeEeEcCC-------CCCCCccccc---CCEEEEeeEEeCC-CCEEEECC------CCEEEEeeEEEc
Confidence 56 79 999999986521 1223454443 8999999999996 78999997 799999999987
Q ss_pred CC-ce-EEEEeecCCCceeecEEEEeeEEcccee------eEEEEc--cc--CCCCCCCCCCCCCCeEEeEEEEEEEEEc
Q 011615 326 TQ-SG-VRIKTAVGRGAYVKEIYVRRMTMKTMKY------VFWMTG--DY--GSHPDPGFDPKALPTVTGINYRDMVADN 393 (481)
Q Consensus 326 ~~-~G-i~Ikt~~g~~g~v~nI~f~ni~~~~~~~------~i~i~~--~y--~~~~~~~~~~~~~~~i~nItf~nI~~~~ 393 (481)
.. .+ |.|.+ ..+.|+||+|+|++|.+..+ ...|+. .| ++ .... ....+.|+||+|+||++.+
T Consensus 377 ~~g~~~IsiGs---~~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~~~~~~~g~-~~~~--~d~~G~i~nI~f~NI~i~n 450 (549)
T 1x0c_A 377 ESVAPVVEFGW---TPRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYAP-DGLS--SNHSTGNSNMTVRNITWSN 450 (549)
T ss_dssp CSSSCSEECCB---SCCCEEEEEEEEEEEEECCCCSGGGCCCSEEECCBTTTCT-TSCC--SCCCCBEEEEEEEEEEEEE
T ss_pred CCCCceEEECC---CCCcEEEEEEEeeEEECccccccccceEEEecccccccCc-cccC--cCCCceEccEEEEeEEEEe
Confidence 54 45 77766 26889999999999988653 222543 33 32 1111 1113589999999999887
Q ss_pred cC-eeEEE---eccCCCCeeeEEEEeEEEEec
Q 011615 394 VT-QSAKL---DGIRNDPFTGICISNVTIKLT 421 (481)
Q Consensus 394 ~~-~~~~l---~g~~~~~~~~I~~~ni~i~~~ 421 (481)
.. .+..+ .+.++.+++||+|+||++...
T Consensus 451 v~~~g~~~~~~~g~pg~~I~nI~i~NI~i~~~ 482 (549)
T 1x0c_A 451 FRAEGSSSALFRINPIQNLDNISIKNVSIESF 482 (549)
T ss_dssp EEEEEEECCSEEECCSEEEEEEEEEEEEEEEE
T ss_pred EEEeceEEeeecCCCCCcCccEEEEEEEEEcc
Confidence 64 22211 467888999999999999865
No 32
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=99.58 E-value=2e-14 Score=148.34 Aligned_cols=159 Identities=11% Similarity=0.077 Sum_probs=123.1
Q ss_pred EeeccEEEEeeE---EeeCC-----CC-eEEeeccccEEEEeEEEECCCCCCCCCCcCCCCCccEEEEecEEecCCceee
Q 011615 199 MFSDNVQISNLT---LIDSP-----SW-NVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVA 269 (481)
Q Consensus 199 ~~~~nv~I~g~~---i~ns~-----~~-~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gDD~ia 269 (481)
.+.+|++|.|-- +.+.. .+ .+.+..|+|++|+++++.+.+ . + ..+.+|.+. ..|++.
T Consensus 106 ~~~~nItI~G~Gg~~~iDG~G~~~~rp~~i~~~~~~Nv~I~gIti~n~w---~---i--h~s~~V~i~------NtDGi~ 171 (464)
T 1h80_A 106 NIVRNFSFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTIDDNK---T---I--FASILVDVT------ERNGRL 171 (464)
T ss_dssp SCEEEEEEEECTTCEEEECTTCSCCBEEEEEECSEEEEEEEEEEEECCS---C---B--SCSEEECEE------EETTEE
T ss_pred cCccceEEECcCcceEEeCCCCCCCCceEEEEEeeccEEEeeeEEeccc---e---E--eeceeeeee------cCCCce
Confidence 567888888863 33322 12 367899999999999999732 1 3 345555443 356666
Q ss_pred ecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEeccCcCCCEEEEEEEeeEEEcCCceEEEEee-----cCCCceeec
Q 011615 270 VKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKTA-----VGRGAYVKE 344 (481)
Q Consensus 270 i~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~~~~v~nI~v~n~~~~~~~~Gi~Ikt~-----~g~~g~v~n 344 (481)
+ . ++||+|+|+++... .+++ |+.....++||+|+||+|.+ .+||||+++ .+.+|.++|
T Consensus 172 i-~------------s~nV~I~n~~I~~g-ddgi--Gs~~~~~~~NV~V~n~~~~g-g~GIrIktg~d~IG~~~~g~v~N 234 (464)
T 1h80_A 172 H-W------------SRNGIIERIKQNNA-LFGY--GLIQTYGADNILFRNLHSEG-GIALRMETDNLLMKNYKQGGIRN 234 (464)
T ss_dssp E-E------------EEEEEEEEEEEESC-CTTC--EEEEESEEEEEEEEEEEEES-SEEEEEECCCHHHHHHTCCEEEE
T ss_pred e-e------------ccCEEEeceEEecC-CCeE--EecccCCEeEEEEEeeEEEC-CCEEEEEeCCceeccCCCCcEEE
Confidence 6 1 89999999999986 4455 44455689999999999999 899999998 666789999
Q ss_pred EEEEeeEEccceeeEEEEcccCCCCCCCCCCCCCCeEEeEEEEEEEEEccCeeEEEe
Q 011615 345 IYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLD 401 (481)
Q Consensus 345 I~f~ni~~~~~~~~i~i~~~y~~~~~~~~~~~~~~~i~nItf~nI~~~~~~~~~~l~ 401 (481)
|+|+|++|+++.+||.|++. ...++||+|+||+++++..++.|.
T Consensus 235 I~~~Ni~~~nv~~~I~I~p~-------------~~~isnItfeNI~~t~~~~aI~i~ 278 (464)
T 1h80_A 235 IFADNIRCSKGLAAVMFGPH-------------FMKNGDVQVTNVSSVSCGSAVRSD 278 (464)
T ss_dssp EEEEEEEEESSSEEEEEECT-------------TCBCCCEEEEEEEEESSSCSEEEC
T ss_pred EEEEeEEEECCceeEEEeCC-------------CceEeEEEEEEEEEEccceeEEEe
Confidence 99999999999999999832 146899999999999987777764
No 33
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=99.51 E-value=2.5e-13 Score=135.18 Aligned_cols=242 Identities=13% Similarity=0.165 Sum_probs=164.4
Q ss_pred cceEEEEeec----CccCCCccchHHHHHHHHHHhhhc----ccCCCcEEEeCCCcce-eeeEEeccc-eeEEEccCcE-
Q 011615 53 RKHSAVLTDF----GGVGDGKTSNTKAFNTAISNLSKY----AADGGAQLIVPPGKWL-TGSFNLTSH-FTLYIHKDAL- 121 (481)
Q Consensus 53 ~~~~~nV~dy----GA~gDG~tDdt~Aiq~Ai~~a~~~----~~~~g~~v~iP~G~Yl-~~~i~l~s~-~~l~l~~ga~- 121 (481)
....+||++| +|+||+.+|++++|+++|+++.+. ...+|.+|++|+|+|. -+++.+.-. ++|..+.++.
T Consensus 11 ~~~~~~vt~~~~~~~~~~~~~~d~~~~i~~~ia~~~~~~~~~~A~pGdvI~L~~G~Y~l~g~ivIdkp~LtL~G~~~g~~ 90 (410)
T 2inu_A 11 SPNTYDVTTWRIKAHPEVTAQSDIGAVINDIIADIKQRQTSPDARPGAAIIIPPGDYDLHTQVVVDVSYLTIAGFGHGFF 90 (410)
T ss_dssp -CCEEETTTCCBTTBTTCCHHHHHHHHHHHHHHHHHHHCCCTTSCCCEEEECCSEEEEECSCEEECCTTEEEECSCCCCC
T ss_pred cCceEEEEEecccCCCcCCCchhHHHHHHHHHHHhhcccccccCCCCCEEEECCCeeccCCcEEEecCcEEEEecCCCcc
Confidence 3579999999 899999999999999999998741 1257999999999996 589999766 8887665343
Q ss_pred ---EEecCCCCCCCCCCCCCCCCCCCC--CCC-CCceeeEEEe-----ceeceEEEccceeeeCC-----Cchhhhhccc
Q 011615 122 ---LLASQDESEWPLLPPLPSYGRGRD--EPG-GRFSSLIFGT-----NLTDVVVTGGNATINGQ-----GEPWWIKYRK 185 (481)
Q Consensus 122 ---i~~~~~~~~~~~~~~~~~~~~g~~--~~~-~~~~~~i~~~-----~~~ni~I~G~~G~idG~-----g~~ww~~~~~ 185 (481)
|.+......|....+ .|.- +.. ......|... ++++|+|.| -+|+|- |..
T Consensus 91 s~~Id~~~~~~g~~~~~g-----~Gs~I~V~a~~~~g~a~~V~~~g~~r~s~V~~~~--v~I~G~~~~~~G~s------- 156 (410)
T 2inu_A 91 SRSILDNSNPTGWQNLQP-----GASHIRVLTSPSAPQAFLVKRAGDPRLSGIVFRD--FCLDGVGFTPGKNS------- 156 (410)
T ss_dssp CHHHHHTSCCTTCSCCSC-----CSEEEEECCCTTSCEEEEECCCSSSCEECCEEES--CEEECCCCSSSTTS-------
T ss_pred eeEEecccccCcccccCC-----CCcEEEEeccccccceeEEeeccCcccCCcEECC--EEEECCEeecCCCC-------
Confidence 332211123221110 0000 000 0001112221 135566665 355553 421
Q ss_pred cCCCCCCCeeEEEEe-eccEEEEeeEEeeCCCCeEEeeccccEEEEeEEEECCCCCCCCCCcCCCC-CccEEEEecEEec
Q 011615 186 KQFNVTRPYLIEVMF-SDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDS-CTNTRIEDNYIVS 263 (481)
Q Consensus 186 ~~~~~~rp~~i~~~~-~~nv~I~g~~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~-s~nV~I~n~~i~~ 263 (481)
......+|.+.. +++++|+++.+.+. .++|.+..+++.+|++..|.. ...||++.+ ++...|+++.+..
T Consensus 157 ---~~~~dAGI~v~~~~d~~~I~nn~i~~~-~fGI~l~~a~~~~I~~N~I~e-----~GNgI~L~G~~~~~~I~~N~i~~ 227 (410)
T 2inu_A 157 ---YHNGKTGIEVASDNDSFHITGMGFVYL-EHALIVRGADALRVNDNMIAE-----CGNCVELTGAGQATIVSGNHMGA 227 (410)
T ss_dssp ---CCCSCEEEEECSCEESCEEESCEEESC-SEEEEETTEESCEEESCEEES-----SSEEEEECSCEESCEEESCEEEC
T ss_pred ---cccCceeEEEeccCCeEEEECCEEecc-cEEEEEccCCCcEEECCEEEe-----cCCceeeccccccceEecceeee
Confidence 123345788876 88899999999876 679999999999999999984 346788887 8889999999999
Q ss_pred CCce--eeecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEeccCcCCCEEEEEEEeeEEEcCCceEEEEe
Q 011615 264 GDDC--VAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKT 334 (481)
Q Consensus 264 gDD~--iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~~~~v~nI~v~n~~~~~~~~Gi~Ikt 334 (481)
++|+ |.+.. +++.+|+++.+......|+-+- ...+..|+++.|.+...|+.+.-
T Consensus 228 ~~dG~gIyl~n------------s~~~~I~~N~i~~~~R~gIh~m-----~s~~~~i~~N~f~~~~~Gi~~M~ 283 (410)
T 2inu_A 228 GPDGVTLLAEN------------HEGLLVTGNNLFPRGRSLIEFT-----GCNRCSVTSNRLQGFYPGMLRLL 283 (410)
T ss_dssp CTTSEEEEEES------------EESCEEESCEECSCSSEEEEEE-----SCBSCEEESCEEEESSSCSEEEE
T ss_pred cCCCCEEEEEe------------CCCCEEECCCcccCcceEEEEE-----ccCCCEEECCEEecceeEEEEEE
Confidence 8888 55544 7888888887754325677663 33456778888888888877754
No 34
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=99.36 E-value=4.4e-11 Score=125.40 Aligned_cols=182 Identities=14% Similarity=0.077 Sum_probs=127.4
Q ss_pred EEEeeccEEEEeeEEeeCC--------------CCeEEeeccccEEEEeEEEECCCCCCCCCCcCCCCCccEEEEecEEe
Q 011615 197 EVMFSDNVQISNLTLIDSP--------------SWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIV 262 (481)
Q Consensus 197 ~~~~~~nv~I~g~~i~ns~--------------~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~ 262 (481)
.+.+.+||+|+|.+|.... -..+.+..|+|++|+++++.+++ .+|+++.++.+
T Consensus 101 ~a~~~~NItItG~TIDGNG~~~g~~~~~~g~~RP~lI~f~~c~NV~I~gVti~NSp----~~gI~I~~~~~--------- 167 (609)
T 3gq8_A 101 VTTGNENIFLSSFTLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCT----LHGIDITCGGL--------- 167 (609)
T ss_dssp TTTCCEEEEEEEEEEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCS----SCSEEEECSSS---------
T ss_pred eecccccEEEEeeEEECCccccCcccccCCCCCccEEEEEeeceEEEEeeEEEeCC----CCCeEEeCCCC---------
Confidence 4567899999999765311 12367888899999999988743 24555443332
Q ss_pred cCCceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEeccCcCCCEEEEEEEeeEEEcC-----CceEEEEeecC
Q 011615 263 SGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINT-----QSGVRIKTAVG 337 (481)
Q Consensus 263 ~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~~~~v~nI~v~n~~~~~~-----~~Gi~Ikt~~g 337 (481)
+ |++.+. +.....+++||+|+||++....++||+|.+ .+||+|+||++++. .+|+.|.+
T Consensus 168 N--DGid~D------Gi~fd~~S~NV~I~Nc~I~~tGDDcIaIks-----seNI~I~Nc~~~gp~G~S~~~GIsIGs--- 231 (609)
T 3gq8_A 168 D--YPYLGD------GTTAPNPSENIWIENCEATGFGDDGITTHH-----SQYINILNCYSHDPRLTANCNGFEIDD--- 231 (609)
T ss_dssp S--CCCCCT------TCCCSSCCEEEEEESCEEESCSSCSEEECS-----CEEEEEESCEEECCSSCSSCCSEEECT---
T ss_pred C--ccccCC------CccccccceeEEEEeeEEEecCCCEEEecC-----CeeEEEEeEEEECCCCCCCcccEEccC---
Confidence 1 444332 222334599999999999765589999964 78999999999765 47888852
Q ss_pred CCceeecEEEEeeEEccceeeEEEEcccCCCCCCCCCCCCCCeEEeEEEEE-EEEEcc-CeeEEEecc------CCCCee
Q 011615 338 RGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRD-MVADNV-TQSAKLDGI------RNDPFT 409 (481)
Q Consensus 338 ~~g~v~nI~f~ni~~~~~~~~i~i~~~y~~~~~~~~~~~~~~~i~nItf~n-I~~~~~-~~~~~l~g~------~~~~~~ 409 (481)
..+||+|+|+++.+..++++|+.+- ..+.++||+|.| +...+. ...+...|. +..+..
T Consensus 232 ---gs~NVtV~Nc~i~nt~~GIrIKt~~-----------~~~~v~NV~I~n~vs~~nvrsyn~r~iG~~~a~dp~s~~a~ 297 (609)
T 3gq8_A 232 ---GSRHVVLSNNRSKGCYGGIEIKAHG-----------DAPAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAK 297 (609)
T ss_dssp ---TCEEEEEESEEEESSSEEEEEEECT-----------TSCCCEEEEEEEEEEESCSEEEEEEETTSCSTTSCCCSSCE
T ss_pred ---CcccEEEEeeEEECCCCEEEEEecC-----------CCCccccEEEECCEeecCceEecceEEccccCCCCCcceec
Confidence 2399999999999999999999641 124678888887 555443 233444443 334788
Q ss_pred eEEEEeEEEEec
Q 011615 410 GICISNVTIKLT 421 (481)
Q Consensus 410 ~I~~~ni~i~~~ 421 (481)
||+|.|+.....
T Consensus 298 nV~l~n~~~~~p 309 (609)
T 3gq8_A 298 NIVASNLVSIRP 309 (609)
T ss_dssp EEEEEEEEEESC
T ss_pred ceEeecceEEee
Confidence 999999988754
No 35
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=99.33 E-value=5.6e-11 Score=126.62 Aligned_cols=183 Identities=14% Similarity=0.090 Sum_probs=126.4
Q ss_pred EEEEeeccEEEEeeEEeeCC--------------CCeEEeeccccEEEEeEEEECCCCCCCCCCcCCCCCccEEEEecEE
Q 011615 196 IEVMFSDNVQISNLTLIDSP--------------SWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYI 261 (481)
Q Consensus 196 i~~~~~~nv~I~g~~i~ns~--------------~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i 261 (481)
+.+.+++||+|+|.+|.... -..|.+..|+|++|+++++.+++ .+|+++.+..+
T Consensus 100 I~a~gveNItItG~TIDGNG~~~g~~~~~~g~~RP~lI~f~~ckNV~I~gVti~NSp----~~gI~I~np~~-------- 167 (772)
T 3gqn_A 100 NVTTGNENIFLSSFTLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCT----LHGIDITCGGL-------- 167 (772)
T ss_dssp CTTTCCEEEEEEEEEEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCS----SCSEEEECSSS--------
T ss_pred eeccCceeEEEEeeEEeCCccccCcccccCCCCCccEEEEEeeceEEEEeEEEEeCC----CCCEEEeCCCc--------
Confidence 35568899999999665311 12367888888888888888743 14444433222
Q ss_pred ecCCceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEeccCcCCCEEEEEEEeeEEEcC-----CceEEEEeec
Q 011615 262 VSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINT-----QSGVRIKTAV 336 (481)
Q Consensus 262 ~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~~~~v~nI~v~n~~~~~~-----~~Gi~Ikt~~ 336 (481)
+ |++.+. +..+..+++||+|+||++....++||+|.+ .+||+|+||+|.+. .+||.|.+
T Consensus 168 -N--DGid~D------Gi~fdi~S~NV~I~Nc~I~ntGDDcIAIks-----SeNI~I~Nc~c~gphG~S~~~GIsIGs-- 231 (772)
T 3gqn_A 168 -D--YPYLGD------GTTAPNPSENIWIENCEATGFGDDGITTHH-----SQYINILNCYSHDPRLTANCNGFEIDD-- 231 (772)
T ss_dssp -S--CCCCCT------TCCCSSCCEEEEEESCEEESCSSCSEEECS-----CEEEEEESCEEECCSSSSSCCSEEECT--
T ss_pred -C--CcCCCc------CcccccccceEEEEeeEEEecCcCeEEecC-----CceEEEEeEEEECCCCCCCcccEEecC--
Confidence 1 343332 222334599999999999765589999964 78999999999765 47888852
Q ss_pred CCCceeecEEEEeeEEccceeeEEEEcccCCCCCCCCCCCCCCeEEeEEEEE-EEEEcc-CeeEEEecc------CCCCe
Q 011615 337 GRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRD-MVADNV-TQSAKLDGI------RNDPF 408 (481)
Q Consensus 337 g~~g~v~nI~f~ni~~~~~~~~i~i~~~y~~~~~~~~~~~~~~~i~nItf~n-I~~~~~-~~~~~l~g~------~~~~~ 408 (481)
..+||+|+|+++.+..++|+|+.+ . ..+.++||+|.| +...+. ...+...|. ...+.
T Consensus 232 ----gs~NVtV~Nc~~~nT~nGIRIKt~-~----------~gg~v~NV~I~gnis~~dvrsynir~iG~h~a~dp~s~~a 296 (772)
T 3gqn_A 232 ----GSRHVVLSNNRSKGCYGGIEIKAH-G----------DAPAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSA 296 (772)
T ss_dssp ----TCEEEEEEEEEEESSSEEEEECCC-T----------TSCCCEEEEEEEEEEESCSEEEEECCTTSCSSSSCCCSSC
T ss_pred ----CcccEEEEceEEECCCcEEEEEEe-C----------CCCccccEEEECCEEeccCeEecceEEccccCCCCCCccC
Confidence 239999999999999999999854 1 124688888874 766544 123333332 23478
Q ss_pred eeEEEEeEEEEec
Q 011615 409 TGICISNVTIKLT 421 (481)
Q Consensus 409 ~~I~~~ni~i~~~ 421 (481)
.||.|.|+.....
T Consensus 297 ~nV~l~n~~~~~P 309 (772)
T 3gqn_A 297 KNIVASNLVSIRP 309 (772)
T ss_dssp EEEEEEEEEEESC
T ss_pred ccEEeecceEEcc
Confidence 8999999888754
No 36
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.32 E-value=3.8e-11 Score=121.88 Aligned_cols=173 Identities=12% Similarity=0.035 Sum_probs=127.6
Q ss_pred CeeEEEEeeccEEEEeeEEeeCCCCeEEeec-cccEEEEeEEEECCCCCCCCCCcCC--------CCCccEEEEecEEec
Q 011615 193 PYLIEVMFSDNVQISNLTLIDSPSWNVHPVY-SSNVLIQGLTIRAPIDSPNTDGINP--------DSCTNTRIEDNYIVS 263 (481)
Q Consensus 193 p~~i~~~~~~nv~I~g~~i~ns~~~~i~~~~-~~nv~i~~~~i~~~~~~~n~DGI~~--------~~s~nV~I~n~~i~~ 263 (481)
...|.+..+++.+|++-++.+....++++.. |++++|++..+.. +.+|+.+ ..+++++|+++.+..
T Consensus 172 ~dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i~~-----~~~g~~~~~~g~~~~~~s~nv~i~~N~~~~ 246 (377)
T 2pyg_A 172 LDGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVAYG-----NGSSGLVVQRGLEDLALPSNILIDGGAYYD 246 (377)
T ss_dssp SCSEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEES-----CSSCSEEEECCSSCCCCCEEEEEESCEEES
T ss_pred CCceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECCEEEC-----ccCceEEEeccccCCCCCccEEEECCEEEc
Confidence 3467888999999999888888888999888 9999999999986 5577776 678999999999875
Q ss_pred -CCceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEeccCcCCCEEEEEEEeeEEEcCCc-----eEEEEeecC
Q 011615 264 -GDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQS-----GVRIKTAVG 337 (481)
Q Consensus 264 -gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~~~~v~nI~v~n~~~~~~~~-----Gi~Ikt~~g 337 (481)
...++.+.. +++++|+++++......||.|. ++++++|+|++|.+... .+.+..+.+
T Consensus 247 n~~~Gi~~~~------------~~~v~i~~N~i~~~~~~GI~i~-----g~~~~~i~~N~i~~n~~~~~~~~v~~~~~~~ 309 (377)
T 2pyg_A 247 NAREGVLLKM------------TSDITLQNADIHGNGSSGVRVY-----GAQDVQILDNQIHDNAQAAAVPEVLLQSFDD 309 (377)
T ss_dssp CSSCSEEEEE------------EEEEEEESCEEESCSSCSEEEE-----EEEEEEEESCEEESCCSSSSCCSEEEECEEE
T ss_pred CccCceEecc------------ccCeEEECCEEECCCCceEEEe-----cCCCcEEECcEEECCcccccccceEEEEecC
Confidence 355666654 7999999999998756899986 48999999999997643 344443332
Q ss_pred CCce------eecEEEEeeEEccc---eeeEEEEcccCCCCCCCCCCCCCCeEEeEEEEEEEEEccCeeEEEec
Q 011615 338 RGAY------VKEIYVRRMTMKTM---KYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLDG 402 (481)
Q Consensus 338 ~~g~------v~nI~f~ni~~~~~---~~~i~i~~~y~~~~~~~~~~~~~~~i~nItf~nI~~~~~~~~~~l~g 402 (481)
.++. -++++|+++++++. ..+|.+.. ...+++++++..+.+....+.+.+
T Consensus 310 ~~~~~~~~~~~~~~~i~~N~i~g~~~~~~~i~~~~---------------~~~~~~~i~~n~i~~~~~~v~~~g 368 (377)
T 2pyg_A 310 TAGASGTYYTTLNTRIEGNTISGSANSTYGIQERN---------------DGTDYSSLIDNDIAGVQQPIQLYG 368 (377)
T ss_dssp TTSSSCEEECCBCCEEESCEEECCSSCCEEEEECS---------------SSCBCCEEESCEEESSSEEEECCC
T ss_pred CCccceeeeeccCeEEECCEEECcCCCccceEEcc---------------CCCccEEEECcEEeCCccceEEEc
Confidence 2221 37999999999984 34555522 112456667666665554555544
No 37
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=99.26 E-value=6.1e-12 Score=131.24 Aligned_cols=181 Identities=12% Similarity=0.054 Sum_probs=128.1
Q ss_pred eeEEEEeeccEEEEeeEEeeCCC---C-----e-----EEeeccccEEEEeEEEECCCCCCCCCCcCC---CCCccEEEE
Q 011615 194 YLIEVMFSDNVQISNLTLIDSPS---W-----N-----VHPVYSSNVLIQGLTIRAPIDSPNTDGINP---DSCTNTRIE 257 (481)
Q Consensus 194 ~~i~~~~~~nv~I~g~~i~ns~~---~-----~-----i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~---~~s~nV~I~ 257 (481)
.+|.+.+++|++|.|--..+..+ | . +.+..|+ |+++++.+++ ....+++ ..|+||+|+
T Consensus 142 slI~~~~~~NItItG~GtIDGqG~~wW~~~~~~~~RP~l~f~~c~---I~GITi~NSD---P~w~I~iG~~~~c~NVtI~ 215 (600)
T 2x6w_A 142 DPASSGNLENCHIYGHGVVDFGGYEFGASSQLRNGVAFGRSYNCS---VTGITFQNGD---VTWAITLGWNGYGSNCYVR 215 (600)
T ss_dssp SGGGCCCEEEEEEESSCEEECTTCCCSSTTCCEEEEECCSEEEEE---EESCEEESCC---CSCSEEECBTTBEEEEEEE
T ss_pred ceEEEecceeEEEecceeeeCCccccccccccCCCCCEEEEeeeE---EeCeEEECCC---CccEEEeCCCCCcccEEEe
Confidence 35677889999999865555432 2 1 4456676 9999999851 2345888 899999999
Q ss_pred ecEEecCCceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEe-ccCcCCCEEEEEEEeeEEEcCCceEEEEeec
Q 011615 258 DNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIAL-GSEMSGGIKDVRAEDITAINTQSGVRIKTAV 336 (481)
Q Consensus 258 n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisI-Gs~~~~~v~nI~v~n~~~~~~~~Gi~Ikt~~ 336 (481)
|++|.+- |.+..+.+|. |+|+||++..+ +++|+| ++... .++.++ ++.....||.|.+..
T Consensus 216 nvtfi~a-----I~sspNTDGI--------V~I~nc~I~tG-DDCIAI~KSGs~---~ni~~e--~~~~GHgGISIGSe~ 276 (600)
T 2x6w_A 216 KCRFINL-----VNSSVNADHS--------TVYVNCPYSGV-ESCYFSMSSSFA---RNIACS--VQLHQHDTFYRGSTV 276 (600)
T ss_dssp SCEEECC-----CCCSSCCCEE--------EEEECSSSEEE-ESCEEECCCTTH---HHHEEE--EEECSSSEEEESCEE
T ss_pred CeEEcce-----EecCCCCCEE--------EEEEeeEEecC-CcEEEEecCCCc---CCeEEE--EEcCCCCcEEecccc
Confidence 9993220 1112233332 99999999986 899999 87652 234455 555565799997753
Q ss_pred CCCceeecEEEEeeEEccceeeEEEEcccCCCCCCCCCCCCCCeEEeEEEEEEEEEccCeeEEEe----ccCCCCeeeEE
Q 011615 337 GRGAYVKEIYVRRMTMKTMKYVFWMTGDYGSHPDPGFDPKALPTVTGINYRDMVADNVTQSAKLD----GIRNDPFTGIC 412 (481)
Q Consensus 337 g~~g~v~nI~f~ni~~~~~~~~i~i~~~y~~~~~~~~~~~~~~~i~nItf~nI~~~~~~~~~~l~----g~~~~~~~~I~ 412 (481)
.|.|+||+++| ++ +... .+.+.++||+|+||++.++..++.+. +.+..+++||+
T Consensus 277 --~ggV~NV~V~N-rI---------Kt~~----------G~GG~V~NItfeNI~m~nV~~~I~i~q~~~~~s~~~IsnIt 334 (600)
T 2x6w_A 277 --NGYCRGAYVVM-HA---------AEAA----------GAGSYAYNMQVENNIAVIYGQFVILGSDVTATVSGHLNDVI 334 (600)
T ss_dssp --EEESEEEEEEE-CG---------GGCT----------TTCSEEEEEEEESCEEEESSEEEEEEECBCSSCBCEEEEEE
T ss_pred --cCcEEEEEEEE-EE---------Eeec----------CCCceEEEEEEEEEEEEccceEEEeCCCCCCCCCceEEEEE
Confidence 57899999999 32 2221 12379999999999999988666663 23456899999
Q ss_pred EEeEEEEec
Q 011615 413 ISNVTIKLT 421 (481)
Q Consensus 413 ~~ni~i~~~ 421 (481)
|+||+.+..
T Consensus 335 fkNItgTsa 343 (600)
T 2x6w_A 335 VSGNIVSIG 343 (600)
T ss_dssp EESCEEEEC
T ss_pred EEeEEEEec
Confidence 999999875
No 38
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.17 E-value=1.4e-10 Score=123.67 Aligned_cols=70 Identities=13% Similarity=0.280 Sum_probs=60.1
Q ss_pred ccceEEEEeecCccCCCccchHHHHHHHHHHhhhcccCCCcEEEeCCCcceee-eEEeccceeEEEccCcEEEecC
Q 011615 52 CRKHSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTG-SFNLTSHFTLYIHKDALLLASQ 126 (481)
Q Consensus 52 ~~~~~~nV~dyGA~gDG~tDdt~Aiq~Ai~~a~~~~~~~g~~v~iP~G~Yl~~-~i~l~s~~~l~l~~ga~i~~~~ 126 (481)
+....+||+||||+|||+||||+|||+||+++ .++.+|+||+|+|++. +|.++++++|..+.-.+|++..
T Consensus 396 ~~~~~vnVkd~GA~GDG~tDDT~Ai~~al~aa-----~~g~~v~~P~G~Y~vt~Ti~ip~~~~ivG~~~~~I~~~G 466 (758)
T 3eqn_A 396 APSDFVSVRSQGAKGDGHTDDTQAIKNVFAKY-----AGCKIIFFDAGTYIVTDTIQIPAGTQIVGEVWSVIMGTG 466 (758)
T ss_dssp CGGGEEETTTTTCCCEEEEECHHHHHHHHHHH-----TTTSEEECCSEEEEESSCEEECTTCEEECCSSEEEEECS
T ss_pred cccceEEeeeccccCCCCchhHHHHHHHHHHh-----cCCCEEEECCCEeEECCeEEcCCCCEEEecccceEecCC
Confidence 34569999999999999999999999999965 3688999999999765 8999999999877667777654
No 39
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=99.11 E-value=5.5e-09 Score=108.82 Aligned_cols=209 Identities=6% Similarity=0.053 Sum_probs=117.7
Q ss_pred hHHHHHHHHHHhhhcccCCCcEEEeCCCcceeeeEEe------ccceeEEEcc-C-cEEEecCCCCCCCCCCCCCCCCCC
Q 011615 72 NTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNL------TSHFTLYIHK-D-ALLLASQDESEWPLLPPLPSYGRG 143 (481)
Q Consensus 72 dt~Aiq~Ai~~a~~~~~~~g~~v~iP~G~Yl~~~i~l------~s~~~l~l~~-g-a~i~~~~~~~~~~~~~~~~~~~~g 143 (481)
+.+.||+|+++| .+|.+|+|++|+|.-..+.+ ..+++|.-+. + ++|...
T Consensus 30 ~~~~Lq~Ai~~A-----~pGDtI~L~~GtY~~~~i~i~~sGt~~~pItl~~~~~~~~vi~G~------------------ 86 (506)
T 1dbg_A 30 SNETLYQVVKEV-----KPGGLVQIADGTYKDVQLIVSNSGKSGLPITIKALNPGKVFFTGD------------------ 86 (506)
T ss_dssp SHHHHHHHHHHC-----CTTCEEEECSEEEETCEEEECCCCBTTBCEEEEESSTTSEEEEES------------------
T ss_pred CHHHHHHHHHhC-----CCCCEEEECCCEEecceEEEecCCcCCCCEEEECCCCCccEEeCC------------------
Confidence 356799999987 46899999999997446666 2345554431 1 222211
Q ss_pred CCCCCCCceeeEEEeceeceEEEccceeeeCCCchhhhhccccCCCCCCCeeEEEEeeccEEEEeeEEeeCCCC-eEEee
Q 011615 144 RDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSPSW-NVHPV 222 (481)
Q Consensus 144 ~~~~~~~~~~~i~~~~~~ni~I~G~~G~idG~g~~ww~~~~~~~~~~~rp~~i~~~~~~nv~I~g~~i~ns~~~-~i~~~ 222 (481)
..+.. ..++++|+| -+|.+.+..-.. . ....+..+.+. .++++|++++|.+...- .+.+.
T Consensus 87 ---------~~l~i-~g~~v~i~G--L~i~~~~~~~~~-~-----~~~~~~~iav~-G~~~~I~nn~I~~~~~gd~i~i~ 147 (506)
T 1dbg_A 87 ---------AKVEL-RGEHLILEG--IWFKDGNRAIQA-W-----KSHGPGLVAIY-GSYNRITACVFDCFDEANSAYIT 147 (506)
T ss_dssp ---------CEEEE-CSSSEEEES--CEEEEECCCTTT-C-----CTTSCCSEEEC-SSSCEEESCEEESCCSSCSCSEE
T ss_pred ---------ceEEE-EcCCEEEEC--eEEECCCcceee-e-----ecccccceEEe-cCCeEEEeeEEEcCCCCceeeEe
Confidence 01111 124455554 233332210000 0 00012234444 47889999999876431 02222
Q ss_pred --------ccccEEEEeEEEECCCCCCCCC----CcCCCC-------CccEEEEecEEecCC------ceeeecCCCCcc
Q 011615 223 --------YSSNVLIQGLTIRAPIDSPNTD----GINPDS-------CTNTRIEDNYIVSGD------DCVAVKSGWDEY 277 (481)
Q Consensus 223 --------~~~nv~i~~~~i~~~~~~~n~D----GI~~~~-------s~nV~I~n~~i~~gD------D~iai~sg~~~~ 277 (481)
..++.+|++++|.+........ ||++.. +.+.+|+|+.|...+ +.+.++.
T Consensus 148 ~~~~~~~l~g~~n~I~~N~I~Gk~~~G~~i~gnngI~l~~~~~~~~~~~~~~I~nN~f~~~~~~~N~~e~iR~G~----- 222 (506)
T 1dbg_A 148 TSLTEDGKVPQHCRIDHCSFTDKITFDQVINLNNTARAIKDGSVGGPGMYHRVDHCFFSNPQKPGNAGGGIRIGY----- 222 (506)
T ss_dssp ECCCTTCCCCCSCEEESCEEECCCSSSCSEEECSSCCCSCCCSCCCCCCCCEEESCEEEECCCSSSCCCSEEECS-----
T ss_pred ecccceeeeccccEEECcEEECCcCcceEEecCceeEeccCcccccccCCeEEeCcEEcccccCCCccccEEEEE-----
Confidence 5667789999998854333333 788775 368999999998643 2222221
Q ss_pred CcccCCceeeEEEEEEEEeCCCCceEEeccCcCCCEEEEEEEeeEEEcCCceEEEEe
Q 011615 278 GIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQSGVRIKT 334 (481)
Q Consensus 278 g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~~~~v~nI~v~n~~~~~~~~Gi~Ikt 334 (481)
..+.+++.+|+++.|... ..|..|-+. ...+.+|+++++.+...+|.+..
T Consensus 223 ---h~m~s~~~~VenN~f~~~-~gg~aim~s---kS~~n~i~~N~~~~~~ggi~l~~ 272 (506)
T 1dbg_A 223 ---YRNDIGRCLVDSNLFMRQ-DSEAEIITS---KSQENVYYGNTYLNCQGTMNFRH 272 (506)
T ss_dssp ---STTCBCCCEEESCEEEEE-CSSSEEEEE---ESBSCEEESCEEESCSSEEEEEE
T ss_pred ---EecccCCcEEECCEEEec-cCcEEEEEE---ecCCEEEECCEEEcccCcEEEee
Confidence 123467888888888864 223333211 11135788888888877777654
No 40
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=99.00 E-value=2.3e-08 Score=101.56 Aligned_cols=246 Identities=13% Similarity=0.146 Sum_probs=143.3
Q ss_pred eEEEEeecCc-cCCCccchHH-HHHHHHHHhhhcccCCCcEEEeCCCcce-------eeeEEec-cc-----eeEEEccC
Q 011615 55 HSAVLTDFGG-VGDGKTSNTK-AFNTAISNLSKYAADGGAQLIVPPGKWL-------TGSFNLT-SH-----FTLYIHKD 119 (481)
Q Consensus 55 ~~~nV~dyGA-~gDG~tDdt~-Aiq~Ai~~a~~~~~~~g~~v~iP~G~Yl-------~~~i~l~-s~-----~~l~l~~g 119 (481)
.++-|..-|- .++|.+-+++ .||+|+++| .+|.+|+|.+|+|. ...|.+. ++ ++|.-..+
T Consensus 15 ~~~yVsp~Gsd~~~G~t~~~P~tiq~Ai~~a-----~pGdtI~l~~GtY~~~~~e~~~~~i~~~~sGt~~~pIti~~~~g 89 (400)
T 1ru4_A 15 RIYYVAPNGNSSNNGSSFNAPMSFSAAMAAV-----NPGELILLKPGTYTIPYTQGKGNTITFNKSGKDGAPIYVAAANC 89 (400)
T ss_dssp CEEEECTTCCTTCCSSSTTSCBCHHHHHHHC-----CTTCEEEECSEEEECCCBTTBCCCEEECCCCBTTBCEEEEEGGG
T ss_pred cEEEEcCCCCCCCCCccccCCccHHHHHhhC-----CCCCEEEECCCeEccccccccceeEEecCCCCCCCCEEEEEecC
Confidence 4555544342 2344222222 699999987 36899999999997 2445553 22 55544432
Q ss_pred --cEEEecCCC-CCCCCCCCCCCCCCCCCCCCCCceeeEEEeceeceEEEccceeeeCCCchhhhhccccCCCCCCCeeE
Q 011615 120 --ALLLASQDE-SEWPLLPPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLI 196 (481)
Q Consensus 120 --a~i~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~ni~I~G~~G~idG~g~~ww~~~~~~~~~~~rp~~i 196 (481)
.+|. .... ..|.. . ..-|.. ..+.++|+| -+|...+. ..|
T Consensus 90 ~~~vI~-~~~~~g~~~~----~-------------~~~i~i-~~~~~~i~g--l~I~n~g~----------------~GI 132 (400)
T 1ru4_A 90 GRAVFD-FSFPDSQWVQ----A-------------SYGFYV-TGDYWYFKG--VEVTRAGY----------------QGA 132 (400)
T ss_dssp CCEEEE-CCCCTTCCCT----T-------------CCSEEE-CSSCEEEES--EEEESCSS----------------CSE
T ss_pred CCCEEe-CCccCCcccc----c-------------eeEEEE-ECCeEEEEe--EEEEeCCC----------------CcE
Confidence 2222 1100 00000 0 001221 334555555 24432221 045
Q ss_pred EEEeeccEEEEeeEEeeCCCCeEEeeccc-cEEEEeEEEECCCC----CCCCCCcCCCC--CccEEEEecEEec-CCcee
Q 011615 197 EVMFSDNVQISNLTLIDSPSWNVHPVYSS-NVLIQGLTIRAPID----SPNTDGINPDS--CTNTRIEDNYIVS-GDDCV 268 (481)
Q Consensus 197 ~~~~~~nv~I~g~~i~ns~~~~i~~~~~~-nv~i~~~~i~~~~~----~~n~DGI~~~~--s~nV~I~n~~i~~-gDD~i 268 (481)
.+.. .+.+|+++++.+....+|.+.... +.+|.++++....+ ..+.|||.+.. ..+.+|++|.+.. .||++
T Consensus 133 ~v~g-s~~~i~n~~i~~n~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~dG~~~~~~~g~Gn~~~~~~~~~N~ddGi 211 (400)
T 1ru4_A 133 YVIG-SHNTFENTAFHHNRNTGLEINNGGSYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWENSDDGF 211 (400)
T ss_dssp EECS-SSCEEESCEEESCSSCSEEECTTCCSCEEESCEEECCCCTTTTTSSCCSEEECTTCCSCCEEESCEEESCSSCSE
T ss_pred EEeC-CCcEEEeEEEECCCceeEEEEcccCCeEEEceEEEcccCccccCcccceEEEEecccCCeEEECCEEeecCCCcE
Confidence 5555 677888888888777678877644 77888888887543 23568887653 3678888888865 67787
Q ss_pred eecCCCCccCcccCCceeeEEEEEEEEeCCC------------CceEEeccCcCCCEEEEEEEeeEEEcC-CceEEEEee
Q 011615 269 AVKSGWDEYGIKVGMPTQHLIIRRLICISPD------------SAAIALGSEMSGGIKDVRAEDITAINT-QSGVRIKTA 335 (481)
Q Consensus 269 ai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~------------~~gisIGs~~~~~v~nI~v~n~~~~~~-~~Gi~Ikt~ 335 (481)
.+... ...++|+||..+... +.|+.+|++. ...+.+|+||...+. ..|+.....
T Consensus 212 dl~~~-----------~~~v~i~nn~a~~Ng~~~~~~n~~~gngnGf~lgg~~--~~~~~~v~nn~a~~N~~~G~~~n~~ 278 (400)
T 1ru4_A 212 DLFDS-----------PQKVVIENSWAFRNGINYWNDSAFAGNGNGFKLGGNQ--AVGNHRITRSVAFGNVSKGFDQNNN 278 (400)
T ss_dssp ECTTC-----------CSCCEEESCEEESTTCCCSCCTTCCCCCCSEECCCTT--CCCCCEEESCEEESCSSEEEECTTC
T ss_pred EEEec-----------CCCEEEEeEEEECCccccccccccccCCCCEEEeccC--CcCCEEEEeeEEECCcCcCEeecCC
Confidence 77532 466888888886531 4577777653 345777888888765 356655321
Q ss_pred cCCCceeecEEEEeeEEccceeeEEEE
Q 011615 336 VGRGAYVKEIYVRRMTMKTMKYVFWMT 362 (481)
Q Consensus 336 ~g~~g~v~nI~f~ni~~~~~~~~i~i~ 362 (481)
-.+++++|.++.+....+.+.
T Consensus 279 ------~~~~~i~nNt~~~N~~~~~~~ 299 (400)
T 1ru4_A 279 ------AGGVTVINNTSYKNGINYGFG 299 (400)
T ss_dssp ------SSCCEEESCEEESSSEEEEEC
T ss_pred ------CCCEEEECeEEECCccceEEe
Confidence 123677777776655555553
No 41
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=98.65 E-value=7.5e-07 Score=88.72 Aligned_cols=85 Identities=20% Similarity=0.166 Sum_probs=58.1
Q ss_pred CCCCcCCCCCccEEEEecEEecC---CceeeecCCCC---ccC-cccCCceeeEEEEEEEEeCCCCceEEeccCcCC---
Q 011615 242 NTDGINPDSCTNTRIEDNYIVSG---DDCVAVKSGWD---EYG-IKVGMPTQHLIIRRLICISPDSAAIALGSEMSG--- 311 (481)
Q Consensus 242 n~DGI~~~~s~nV~I~n~~i~~g---DD~iai~sg~~---~~g-~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~~~--- 311 (481)
..|+|.+.+++||.|++|+|..+ |++.....|.. .+| .+....+++|+|++|+|.. +..+.-+|+....
T Consensus 132 ~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~-h~k~~LiG~sd~~~~~ 210 (355)
T 1pcl_A 132 EWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALDIKKGSDYVTISYSRFEL-HDKTILIGHSDSNGSQ 210 (355)
T ss_pred cCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccceeeecCCCcEEEEeeEEcC-CCceEEeCCCCCCccc
Confidence 47899999999999999999864 33322222211 011 1123348999999999997 3567778876431
Q ss_pred --CEEEEEEEeeEEEcCC
Q 011615 312 --GIKDVRAEDITAINTQ 327 (481)
Q Consensus 312 --~v~nI~v~n~~~~~~~ 327 (481)
+..+|++.++.|.++.
T Consensus 211 d~g~~~vT~hhN~f~~~~ 228 (355)
T 1pcl_A 211 DSGKLRVTFHNNVFDRVT 228 (355)
T ss_pred ccCcceEEEECcEEeCCc
Confidence 3458999999998763
No 42
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=98.56 E-value=1.8e-06 Score=86.19 Aligned_cols=89 Identities=15% Similarity=0.096 Sum_probs=57.6
Q ss_pred ccccEEEEeEEEECC--CCCCCCCCcCCCCCccEEEEecEEec-CCceeeecCCCCccCcccCCceeeEEEEEEEEeCCC
Q 011615 223 YSSNVLIQGLTIRAP--IDSPNTDGINPDSCTNTRIEDNYIVS-GDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPD 299 (481)
Q Consensus 223 ~~~nv~i~~~~i~~~--~~~~n~DGI~~~~s~nV~I~n~~i~~-gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~ 299 (481)
.++||.|+|++|+.. ......|+|.+..++||.|++|.+.. +|..+.... ..+++|+|++|+|....
T Consensus 131 ~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~~d~~~~~g~----------~~s~~VTISnn~f~~~~ 200 (359)
T 1idk_A 131 GAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARIGRQHYVLGT----------SADNRVSLTNNYIDGVS 200 (359)
T ss_dssp TCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEESSCSEEECC----------CTTCEEEEESCEEECBC
T ss_pred CCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecCCCCcEEecc----------cCcceEEEECcEecCCc
Confidence 344555555555542 11235689999999999999999975 565554411 12789999999998421
Q ss_pred -----------CceEEeccCcCCCEEEEEEEeeEEEcC
Q 011615 300 -----------SAAIALGSEMSGGIKDVRAEDITAINT 326 (481)
Q Consensus 300 -----------~~gisIGs~~~~~v~nI~v~n~~~~~~ 326 (481)
..++-+|+ ..+|++.++.|.+.
T Consensus 201 ~~s~~~~G~h~~~~~L~G~-----sd~vT~hhN~f~~~ 233 (359)
T 1idk_A 201 DYSATCDGYHYWAIYLDGD-----ADLVTMKGNYIYHT 233 (359)
T ss_dssp SCBTTSSSBBSCCEEECCS-----SCEEEEESCEEESB
T ss_pred ccccccCccccceEEEEec-----CCCeEEEceEeecC
Confidence 02333332 23899999999865
No 43
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=98.50 E-value=1.2e-06 Score=86.63 Aligned_cols=103 Identities=16% Similarity=0.160 Sum_probs=60.2
Q ss_pred ccccEEEEeEEEECCCCCCCCCCcCCC-----CCccEEEEecEEecC-CceeeecCCCCccCcccCCceeeEEEEEEEEe
Q 011615 223 YSSNVLIQGLTIRAPIDSPNTDGINPD-----SCTNTRIEDNYIVSG-DDCVAVKSGWDEYGIKVGMPTQHLIIRRLICI 296 (481)
Q Consensus 223 ~~~nv~i~~~~i~~~~~~~n~DGI~~~-----~s~nV~I~n~~i~~g-DD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~ 296 (481)
.++||.|+|++|+........|+|.+. .++||.|++|+|..+ +.|.........-..+...++.+|+|++|+|.
T Consensus 93 ~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTISnn~f~ 172 (330)
T 2qy1_A 93 NAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTVSYNYVY 172 (330)
T ss_dssp SCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEEESCEEE
T ss_pred CCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEEEEcceec
Confidence 344455555555442211356888887 589999999999643 22221110000001122334899999999998
Q ss_pred CCCCceEEeccCcCC---CEEEEEEEeeEEEcC
Q 011615 297 SPDSAAIALGSEMSG---GIKDVRAEDITAINT 326 (481)
Q Consensus 297 ~~~~~gisIGs~~~~---~v~nI~v~n~~~~~~ 326 (481)
.. +.++-+|+.... ...+|++.++.|.+.
T Consensus 173 ~h-~k~~L~G~sd~~~~~~~~~vT~h~N~f~~~ 204 (330)
T 2qy1_A 173 NY-QKVALNGYSDSDTKNSAARTTYHHNRFENV 204 (330)
T ss_dssp EE-EECCEESSSTTCGGGGGCEEEEESCEEEEE
T ss_pred cC-CeEEEECCCCccccCCCceEEEECcEEcCC
Confidence 63 456667764221 125899999999765
No 44
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.46 E-value=6.4e-06 Score=81.20 Aligned_cols=74 Identities=18% Similarity=0.131 Sum_probs=57.1
Q ss_pred CCCCcCCCCCccEEEEecEEecC-CceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEeccCcCC------CEE
Q 011615 242 NTDGINPDSCTNTRIEDNYIVSG-DDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSG------GIK 314 (481)
Q Consensus 242 n~DGI~~~~s~nV~I~n~~i~~g-DD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~~~------~v~ 314 (481)
..|+|.+..++||.|++|.+..+ |.++.++.+ +.+|+|++|.|... ..+.-+|+.... +-.
T Consensus 115 ~~DaI~i~~s~nVWIDHcs~s~~~Dg~idi~~~-----------s~~vTISnn~f~~h-~k~~LiG~sd~~~~~~d~g~~ 182 (340)
T 3zsc_A 115 DFDYINVENSHHIWIDHITFVNGNDGAVDIKKY-----------SNYITVSWNKFVDH-DKVSLVGSSDKEDPEQAGQAY 182 (340)
T ss_dssp CCCSEEEESCEEEEEESCEEESCSSCSEEEETT-----------CEEEEEESCEEESC-SBCCEECCCTTSCHHHHHHSC
T ss_pred CCCeEEEecCCcEEEEeeeeccCCccceEEecC-----------CceEEEECcEeccC-ceeeEeCcCCCCccccccCCc
Confidence 57899999999999999999875 555777654 89999999999973 667777865421 135
Q ss_pred EEEEEeeEEEcCC
Q 011615 315 DVRAEDITAINTQ 327 (481)
Q Consensus 315 nI~v~n~~~~~~~ 327 (481)
+|++.++.|.+..
T Consensus 183 ~vT~hhN~f~~~~ 195 (340)
T 3zsc_A 183 KVTYHHNYFKNLI 195 (340)
T ss_dssp EEEEESCEEESCC
T ss_pred EEEEECeEecCCC
Confidence 8999999998763
No 45
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.39 E-value=1.8e-06 Score=85.74 Aligned_cols=74 Identities=19% Similarity=0.196 Sum_probs=59.2
Q ss_pred CCCCCcCCCCCccEEEEecEEecCCcee-eecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEeccCcC---CCEEEE
Q 011615 241 PNTDGINPDSCTNTRIEDNYIVSGDDCV-AVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMS---GGIKDV 316 (481)
Q Consensus 241 ~n~DGI~~~~s~nV~I~n~~i~~gDD~i-ai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~~---~~v~nI 316 (481)
...|||.+.+++||.|++|+|..+.|++ .++.+ +++|+|++|+|.. +..++-+|+... +...+|
T Consensus 148 ~~~DaI~i~~s~nVwIDHcs~s~~~Dg~id~~~~-----------s~~vTISnn~f~~-H~k~~l~G~sd~~~~d~~~~v 215 (346)
T 1pxz_A 148 QDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTLG-----------STGITISNNHFFN-HHKVMLLGHDDTYDDDKSMKV 215 (346)
T ss_dssp CCCCSEEEESCEEEEEESCEEECCSSEEEEEESS-----------CEEEEEESCEEES-EEEEEEESCCSSCGGGGGCEE
T ss_pred CCCCEEEEecCceEEEEeeEEecCCCCcEeeccC-----------cceEEEEeeEEec-CCceeEECCCCccccCCceEE
Confidence 5689999999999999999999887775 56443 8999999999996 356888887532 234589
Q ss_pred EEEeeEE-EcC
Q 011615 317 RAEDITA-INT 326 (481)
Q Consensus 317 ~v~n~~~-~~~ 326 (481)
++.++.| .+.
T Consensus 216 T~~~N~f~~~~ 226 (346)
T 1pxz_A 216 TVAFNQFGPNA 226 (346)
T ss_dssp EEESCEECSSE
T ss_pred EEEeeEEeCCc
Confidence 9999999 554
No 46
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=98.37 E-value=9.3e-06 Score=80.99 Aligned_cols=109 Identities=11% Similarity=0.069 Sum_probs=68.5
Q ss_pred EeeccEEEEeeEEeeCCC--------------------CeEEee-ccccEEEEeEEEECCCCCCCCCCcCCCCCccEEEE
Q 011615 199 MFSDNVQISNLTLIDSPS--------------------WNVHPV-YSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIE 257 (481)
Q Consensus 199 ~~~~nv~I~g~~i~ns~~--------------------~~i~~~-~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~ 257 (481)
..+++++++||+|+|+.. -.+.+. ..+.+.+.+|++.. ..|.+......+..++
T Consensus 119 V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G-----~QDTLy~~~~gr~yf~ 193 (364)
T 3uw0_A 119 VNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEG-----YQDTLYSKTGSRSYFS 193 (364)
T ss_dssp ECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEEC-----SBSCEEECTTCEEEEE
T ss_pred EECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEe-----cccceEeCCCCCEEEE
Confidence 357899999999999842 234444 57888888888886 3466766545678888
Q ss_pred ecEEecCCceeeecCCCCccCcccCCceeeEEEEEEEEeCCC-------CceEEeccCcCCCEEEEEEEeeEEEcC
Q 011615 258 DNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPD-------SAAIALGSEMSGGIKDVRAEDITAINT 326 (481)
Q Consensus 258 n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~-------~~gisIGs~~~~~v~nI~v~n~~~~~~ 326 (481)
+|.|...-|-|- + .-...++||++..-. ..-|.-.+.....-..+.|.||++...
T Consensus 194 ~c~I~GtvDFIF-G-------------~a~a~f~~c~i~~~~~~~~~~~~g~ITA~~~~~~~~~G~vf~~c~i~~~ 255 (364)
T 3uw0_A 194 DCEISGHVDFIF-G-------------SGITVFDNCNIVARDRSDIEPPYGYITAPSTLTTSPYGLIFINSRLTKE 255 (364)
T ss_dssp SCEEEESEEEEE-E-------------SSEEEEESCEEEECCCSSCSSCCEEEEEECCCTTCSCCEEEESCEEEEC
T ss_pred cCEEEcCCCEEC-C-------------cceEEEEeeEEEEeccCcccCCccEEEeCCcCCCCCcEEEEEeeEEecC
Confidence 888886655442 1 234677777776420 122333322222234578888888764
No 47
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=98.35 E-value=4.7e-06 Score=81.76 Aligned_cols=139 Identities=9% Similarity=0.107 Sum_probs=87.6
Q ss_pred eEEEEeeccEEEEeeEEeeCCC------CeEEeeccccEEEEeEEEECCCCCCCCCCcCCCCCccEEEEecEEecCCcee
Q 011615 195 LIEVMFSDNVQISNLTLIDSPS------WNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCV 268 (481)
Q Consensus 195 ~i~~~~~~nv~I~g~~i~ns~~------~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gDD~i 268 (481)
.+.+ .+++++++||+|+|+.. -.+.+ .++++.+.+|+|.. +.|++.....++ .+++|.|...-|-|
T Consensus 84 tv~v-~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g-----~QDTLy~~~~r~-~~~~c~I~G~vDFI 155 (317)
T 1xg2_A 84 TLAA-VGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDA-----YQDTLYAHSQRQ-FYRDSYVTGTVDFI 155 (317)
T ss_dssp SEEE-CSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEEC-----STTCEEECSSEE-EEESCEEEESSSCE
T ss_pred EEEE-ECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCc-----cccceeecCccE-EEEeeEEEeceeEE
Confidence 3444 68899999999999742 34544 58889999999986 457777766554 88999998766654
Q ss_pred eecCCCCccCcccCCceeeEEEEEEEEeCCC-----CceEEecc-CcCCCEEEEEEEeeEEEcCCceE----EEEeecCC
Q 011615 269 AVKSGWDEYGIKVGMPTQHLIIRRLICISPD-----SAAIALGS-EMSGGIKDVRAEDITAINTQSGV----RIKTAVGR 338 (481)
Q Consensus 269 ai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~-----~~gisIGs-~~~~~v~nI~v~n~~~~~~~~Gi----~Ikt~~g~ 338 (481)
- + .-...+++|.+..-. ...|.--+ .....-....|.||++....... ..+++-|+
T Consensus 156 f-G-------------~~~avf~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGR 221 (317)
T 1xg2_A 156 F-G-------------NAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGR 221 (317)
T ss_dssp E-E-------------CCEEEEESCEEEECCCSTTCCEEEEEECCCCTTSCCEEEEESCEEEECTTTGGGTTTSCEEEEC
T ss_pred c-C-------------CceEEEeeeEEEEeccCCCCccEEEecCcCCCCCCcEEEEECCEEecCCCccccccceeEEeec
Confidence 2 2 234788888887521 12233322 22334567889999998654210 00112222
Q ss_pred C-ceeecEEEEeeEEccc
Q 011615 339 G-AYVKEIYVRRMTMKTM 355 (481)
Q Consensus 339 ~-g~v~nI~f~ni~~~~~ 355 (481)
. +....+.|.+..|.+.
T Consensus 222 pW~~~sr~v~~~t~~~~~ 239 (317)
T 1xg2_A 222 PWKEYSRTVVMESYLGGL 239 (317)
T ss_dssp CSSTTCEEEEESCEECTT
T ss_pred ccCCCceEEEEecccCCc
Confidence 1 2345688888888764
No 48
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=98.35 E-value=5.9e-06 Score=81.13 Aligned_cols=139 Identities=9% Similarity=0.037 Sum_probs=88.4
Q ss_pred eEEEEeeccEEEEeeEEeeCCC------CeEEeeccccEEEEeEEEECCCCCCCCCCcCCCCCccEEEEecEEecCCcee
Q 011615 195 LIEVMFSDNVQISNLTLIDSPS------WNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCV 268 (481)
Q Consensus 195 ~i~~~~~~nv~I~g~~i~ns~~------~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gDD~i 268 (481)
.+.+ ..++++++||+|+|+.. -.+.+ .++++.+.+|+|.. +.|++.....+ ..+++|.|...-|-|
T Consensus 88 tv~v-~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g-----~QDTLy~~~~r-~~~~~c~I~G~vDFI 159 (319)
T 1gq8_A 88 TVAA-VGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILA-----YQDSLYVHSNR-QFFINCFIAGTVDFI 159 (319)
T ss_dssp SEEE-CSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEEC-----STTCEEECSSE-EEEESCEEEESSSCE
T ss_pred EEEE-ECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECc-----cceeeeecCcc-EEEEecEEEeeeeEE
Confidence 3444 48899999999999642 34554 68889999999996 46777776655 488999998766655
Q ss_pred eecCCCCccCcccCCceeeEEEEEEEEeCCC-----CceEEecc-CcCCCEEEEEEEeeEEEcCCceE----EEEeecCC
Q 011615 269 AVKSGWDEYGIKVGMPTQHLIIRRLICISPD-----SAAIALGS-EMSGGIKDVRAEDITAINTQSGV----RIKTAVGR 338 (481)
Q Consensus 269 ai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~-----~~gisIGs-~~~~~v~nI~v~n~~~~~~~~Gi----~Ikt~~g~ 338 (481)
- + .-...+++|++..-. ...|.--+ .....-....|.||++....... ..+++-|+
T Consensus 160 f-G-------------~~~a~f~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGR 225 (319)
T 1gq8_A 160 F-G-------------NAAVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGR 225 (319)
T ss_dssp E-E-------------SCEEEEESCEEEECCCSTTCCEEEEEECCCSTTCCCEEEEESCEEEECTTTGGGGGGSCEEEEC
T ss_pred e-c-------------CCcEEEEeeEEEEecCCCCCceEEEeCCCCCCCCCceEEEECCEEecCCCccccccceeEEecc
Confidence 3 2 234788888887521 12233322 22334567899999998754210 00122222
Q ss_pred C-ceeecEEEEeeEEccc
Q 011615 339 G-AYVKEIYVRRMTMKTM 355 (481)
Q Consensus 339 ~-g~v~nI~f~ni~~~~~ 355 (481)
. +....+.|.+..|.+.
T Consensus 226 pW~~~sr~v~~~t~~~~~ 243 (319)
T 1gq8_A 226 PWKEYSRTVVMQSSITNV 243 (319)
T ss_dssp CSSTTCEEEEESCEECTT
T ss_pred cCCCcceEEEEeccCCCc
Confidence 1 2345688888888765
No 49
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.29 E-value=1.4e-05 Score=78.73 Aligned_cols=168 Identities=13% Similarity=0.017 Sum_probs=107.7
Q ss_pred eceEEEccceeeeCCCchhhhhccccCCCCCCCeeEEEEeeccEEEEeeEEeeC-----------CCCeEEeeccccEEE
Q 011615 161 TDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDS-----------PSWNVHPVYSSNVLI 229 (481)
Q Consensus 161 ~ni~I~G~~G~idG~g~~ww~~~~~~~~~~~rp~~i~~~~~~nv~I~g~~i~ns-----------~~~~i~~~~~~nv~i 229 (481)
..+.|.. +-||+|++.. . -....|.+.+++||.|++|+|++. ...+|.+..++||.|
T Consensus 62 ~~l~v~s-nkTI~G~ga~--~---------I~G~Gi~I~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~~s~nVWI 129 (340)
T 3zsc_A 62 REIKVLS-DKTIVGINDA--K---------IVGGGLVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVENSHHIWI 129 (340)
T ss_dssp EEEEECS-SEEEEEEEEE--E---------EEEEEEEEESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEESCEEEEE
T ss_pred ceEEecC-CCEEEeccCc--E---------EecCceEEEcCceEEEeCeEEECCccccCccCCcCCCCeEEEecCCcEEE
Confidence 3677754 5799998763 0 113468888999999999999985 345789999999999
Q ss_pred EeEEEECCCCCCCCCC-cCCC-CCccEEEEecEEecCCceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEecc
Q 011615 230 QGLTIRAPIDSPNTDG-INPD-SCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGS 307 (481)
Q Consensus 230 ~~~~i~~~~~~~n~DG-I~~~-~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs 307 (481)
++|++.. ..|| +++. .+++|+|++|.|...+-+.-++... ..+........+|++.++.+.....+.-.+.
T Consensus 130 DHcs~s~-----~~Dg~idi~~~s~~vTISnn~f~~h~k~~LiG~sd-~~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~r- 202 (340)
T 3zsc_A 130 DHITFVN-----GNDGAVDIKKYSNYITVSWNKFVDHDKVSLVGSSD-KEDPEQAGQAYKVTYHHNYFKNLIQRMPRIR- 202 (340)
T ss_dssp ESCEEES-----CSSCSEEEETTCEEEEEESCEEESCSBCCEECCCT-TSCHHHHHHSCEEEEESCEEESCCBCTTEEE-
T ss_pred Eeeeecc-----CCccceEEecCCceEEEECcEeccCceeeEeCcCC-CCccccccCCcEEEEECeEecCCCCCCCccc-
Confidence 9999986 3566 5654 5899999999999766555454421 1100000012489999999986432222221
Q ss_pred CcCCCEEEEEEEeeEEEcC---------CceEEEEeecCCCceeecEEEEeeEEcccee
Q 011615 308 EMSGGIKDVRAEDITAINT---------QSGVRIKTAVGRGAYVKEIYVRRMTMKTMKY 357 (481)
Q Consensus 308 ~~~~~v~nI~v~n~~~~~~---------~~Gi~Ikt~~g~~g~v~nI~f~ni~~~~~~~ 357 (481)
.+ .+++-|+.+.+. -.+-.|....+ ..|.+|+..++++..
T Consensus 203 --~G---~~Hv~NN~~~n~~~~~~~~~~~~~yai~~~~~-----a~i~~E~N~F~~~~~ 251 (340)
T 3zsc_A 203 --FG---MAHVFNNFYSMGLRTGVSGNVFPIYGVASAMG-----AKVHVEGNYFMGYGA 251 (340)
T ss_dssp --SS---EEEEESCEEECCCCCSCSSCCSCCEEEEEETT-----CEEEEESCEEECSCH
T ss_pred --CC---eEEEEccEEECCccccccccceeeeeEecCCC-----CEEEEECcEEECCCc
Confidence 11 578899999881 11222322221 246666666666655
No 50
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=98.29 E-value=6.5e-06 Score=80.83 Aligned_cols=90 Identities=16% Similarity=0.140 Sum_probs=61.2
Q ss_pred cccEEEEeEEEECCCCCCCCCCcCCCC-CccEEEEecEEec----------CCceeeecCCCCccCcccCCceeeEEEEE
Q 011615 224 SSNVLIQGLTIRAPIDSPNTDGINPDS-CTNTRIEDNYIVS----------GDDCVAVKSGWDEYGIKVGMPTQHLIIRR 292 (481)
Q Consensus 224 ~~nv~i~~~~i~~~~~~~n~DGI~~~~-s~nV~I~n~~i~~----------gDD~iai~sg~~~~g~~~~~~s~nI~I~n 292 (481)
++||.|+|++|+... ....|+|.+.. ++||.|++|.|.. .|..+.++.+ +.+|+|++
T Consensus 102 a~NVIIrNl~i~~~~-~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~-----------s~~VTISn 169 (326)
T 3vmv_A 102 AHNIIIQNVSIHHVR-EGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRN-----------AEYITVSW 169 (326)
T ss_dssp EEEEEEESCEEECCC-STTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTT-----------CEEEEEES
T ss_pred cceEEEECeEEEcCC-CCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCC-----------CceEEEEc
Confidence 344444444444322 24578899886 8999999999963 2445555544 89999999
Q ss_pred EEEeCCCCceEEeccCcCC--CEEEEEEEeeEEEcC
Q 011615 293 LICISPDSAAIALGSEMSG--GIKDVRAEDITAINT 326 (481)
Q Consensus 293 ~~~~~~~~~gisIGs~~~~--~v~nI~v~n~~~~~~ 326 (481)
|+|.. ++.+.-+|+.... .-.+|++.++.|.+.
T Consensus 170 n~f~~-h~k~~LiG~sd~~~~~~~~vT~~~N~f~~~ 204 (326)
T 3vmv_A 170 NKFEN-HWKTMLVGHTDNASLAPDKITYHHNYFNNL 204 (326)
T ss_dssp CEEEE-EEECEEECSSSCGGGCCEEEEEESCEEEEE
T ss_pred eEEec-CceEEEECCCCCCcccCccEEEEeeEecCC
Confidence 99996 4667788875321 125899999999765
No 51
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=98.23 E-value=1.7e-05 Score=79.13 Aligned_cols=70 Identities=14% Similarity=0.068 Sum_probs=46.0
Q ss_pred CCCCcCCCCCccEEEEecEEec-CCceeeecCCCCccCcccCCceeeEEEEEEEEeCCC-----------CceEEeccCc
Q 011615 242 NTDGINPDSCTNTRIEDNYIVS-GDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPD-----------SAAIALGSEM 309 (481)
Q Consensus 242 n~DGI~~~~s~nV~I~n~~i~~-gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~-----------~~gisIGs~~ 309 (481)
..|+|.+..++||.|++|.+.. +|..+.... ..+++|+|++|+|.... ...+-+|+
T Consensus 152 ~~DaI~i~~s~nvwIDHcs~s~~~d~~~~~~~----------~~s~~vTISnn~f~~~~~~s~~~~G~H~~~~~l~G~-- 219 (359)
T 1qcx_A 152 GGDAITVDDSDLVWIDHVTTARIGRQHIVLGT----------SADNRVTISYSLIDGRSDYSATCNGHHYWGVYLDGS-- 219 (359)
T ss_dssp SCCSEEEESCCCEEEESCEEEEESSCSEEECS----------SCCEEEEEESCEEECBCSSBTTSSSBBSCCEEECCS--
T ss_pred cCceeEecCCceEEEEeeEeeccCcCceeecc----------cccccEEEECcEecCCccccccCcccccceeEEecC--
Confidence 4588888888999999999876 444442111 12789999999997421 11233332
Q ss_pred CCCEEEEEEEeeEEEcC
Q 011615 310 SGGIKDVRAEDITAINT 326 (481)
Q Consensus 310 ~~~v~nI~v~n~~~~~~ 326 (481)
..+|++.++.|.+.
T Consensus 220 ---sd~vT~~~N~f~~~ 233 (359)
T 1qcx_A 220 ---NDMVTLKGNYFYNL 233 (359)
T ss_dssp ---SEEEEEESCEEESB
T ss_pred ---CCCeehcccEeccC
Confidence 24788888888765
No 52
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=98.23 E-value=0.00023 Score=67.17 Aligned_cols=175 Identities=14% Similarity=0.209 Sum_probs=115.1
Q ss_pred eEEEEeecCccCCCccchHHHHHHHHHHhhhcccCCCcEEEeCCCcceeeeEEeccceeEEEccCcEEEecCCCCCCCCC
Q 011615 55 HSAVLTDFGGVGDGKTSNTKAFNTAISNLSKYAADGGAQLIVPPGKWLTGSFNLTSHFTLYIHKDALLLASQDESEWPLL 134 (481)
Q Consensus 55 ~~~nV~dyGA~gDG~tDdt~Aiq~Ai~~a~~~~~~~g~~v~iP~G~Yl~~~i~l~s~~~l~l~~ga~i~~~~~~~~~~~~ 134 (481)
.++.+++|||.+|-.+||+++|.+.+.. ...|.||.|.|-...+.+ +...|+...+++|.--.....|...
T Consensus 63 rvls~k~fga~~~~~~d~~~~~~~sl~s--------~~~v~i~~gvf~ss~i~~-~~c~l~g~g~g~~~~~~~~gn~lvf 133 (542)
T 2x3h_A 63 RVLTSKPFGAAGDATTDDTEVIAASLNS--------QKAVTISDGVFSSSGINS-NYCNLDGRGSGVLSHRSSTGNYLVF 133 (542)
T ss_dssp HBCBSSCTTCCCBSSSCCHHHHHHHHTS--------SSCEECCSEEEEECCEEE-SCCEEECTTTEEEEECSSSSCCEEE
T ss_pred eeeecccccccCCcccCcHHHHHhhhcc--------cccEeccccccccccccc-ccccccccCCceeeeecCCCCEEEE
Confidence 4778899999999999999999988754 457999999997665554 3567887888888643322222110
Q ss_pred CCCCCCCCCCCCCCCCceeeEEEeceeceEEEccceeeeCCCchhhhhccccCCCCCCCeeEEEEeeccEEEEeeEEeeC
Q 011615 135 PPLPSYGRGRDEPGGRFSSLIFGTNLTDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDS 214 (481)
Q Consensus 135 ~~~~~~~~g~~~~~~~~~~~i~~~~~~ni~I~G~~G~idG~g~~ww~~~~~~~~~~~rp~~i~~~~~~nv~I~g~~i~ns 214 (481)
..-......+++|.|. -. ......+.+.|..-.+|+|+++.+.|.
T Consensus 134 ------------------n~p~~g~ls~~ti~~n-------k~----------~ds~qg~qvs~~gg~dvsv~~i~fsn~ 178 (542)
T 2x3h_A 134 ------------------NNPRTGRLSNITVESN-------KA----------TDTTQGQQVSLAGGSDVTVSDVNFSNV 178 (542)
T ss_dssp ------------------ESCEEEEEEEEEEECC-------CS----------STTCBCCSEEEESCEEEEEEEEEEEEE
T ss_pred ------------------eCCCCcceeeEEEecc-------cC----------CccccceEEEecCCCcceEeeeeeeec
Confidence 0001234567777773 11 122345578999999999999999998
Q ss_pred CCCeEEeec------cccEEEEeEEEECCCCCCCC-CC-cCCCCCccEEEEecEEec--CCceeeecCC
Q 011615 215 PSWNVHPVY------SSNVLIQGLTIRAPIDSPNT-DG-INPDSCTNTRIEDNYIVS--GDDCVAVKSG 273 (481)
Q Consensus 215 ~~~~i~~~~------~~nv~i~~~~i~~~~~~~n~-DG-I~~~~s~nV~I~n~~i~~--gDD~iai~sg 273 (481)
..-++.+.. -+...|++++=.-.....|. -| +-++++.|-+|++..-++ +-.++-+|..
T Consensus 179 ~g~gfsliayp~~~~p~g~~i~~irg~y~g~a~nk~agcvl~dss~nslid~via~nypqfgavelk~~ 247 (542)
T 2x3h_A 179 KGTGFSLIAYPNDAPPDGLMIKGIRGSYSGYATNKAAGCVLADSSVNSLIDNVIAKNYPQFGAVELKGT 247 (542)
T ss_dssp CSBEEEEEEECSSSCCBSCEEEEEEEEECSCCTTCSEEEEEEESCBSCEEEEEEEESCCTTEEEEEETT
T ss_pred CCCceeEEEcCCCCCCCceEEeccccceeccccccccceEEeccchhhhhhhhhhhcCCccceEEeecc
Confidence 776655431 23556777766554443332 23 334578888888887776 4456666653
No 53
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.22 E-value=1.4e-05 Score=79.37 Aligned_cols=139 Identities=9% Similarity=-0.007 Sum_probs=94.6
Q ss_pred eEEEEeeccEEEEeeEEeeC----------------------CCCeEEeeccccEEEEeEEEECCCCCCCCCCc-CC-CC
Q 011615 195 LIEVMFSDNVQISNLTLIDS----------------------PSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGI-NP-DS 250 (481)
Q Consensus 195 ~i~~~~~~nv~I~g~~i~ns----------------------~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI-~~-~~ 250 (481)
.|.+..++||.|++++|++. ...+|.+..+++|.|++|++.. ..||+ ++ ..
T Consensus 107 gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~~s~nVwIDHcs~s~-----~~Dg~id~~~~ 181 (346)
T 1pxz_A 107 CLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRNVTNAWIDHNSLSD-----CSDGLIDVTLG 181 (346)
T ss_dssp CEEEESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEESCEEEEEESCEEEC-----CSSEEEEEESS
T ss_pred eEEEEccCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEecCceEEEEeeEEec-----CCCCcEeeccC
Confidence 47778999999999999864 2346889999999999999986 46886 56 58
Q ss_pred CccEEEEecEEecCCceeeecCCCCccCcccCCceeeEEEEEEEE-eCCCCceEEeccCcCCCEEEEEEEeeEEEcCC-c
Q 011615 251 CTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLIC-ISPDSAAIALGSEMSGGIKDVRAEDITAINTQ-S 328 (481)
Q Consensus 251 s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~-~~~~~~gisIGs~~~~~v~nI~v~n~~~~~~~-~ 328 (481)
+++|+|++|.|...+.++-+.+... .. . ....+|++.++.| .......-.+. ...++|.|+.+.+-. .
T Consensus 182 s~~vTISnn~f~~H~k~~l~G~sd~-~~--~-d~~~~vT~~~N~f~~~~~~R~Pr~r------~g~~hv~NN~~~~~~~~ 251 (346)
T 1pxz_A 182 STGITISNNHFFNHHKVMLLGHDDT-YD--D-DKSMKVTVAFNQFGPNAGQRMPRAR------YGLVHVANNNYDPWNIY 251 (346)
T ss_dssp CEEEEEESCEEESEEEEEEESCCSS-CG--G-GGGCEEEEESCEECSSEEECTTEEE------SSEEEEESCEECCCSSC
T ss_pred cceEEEEeeEEecCCceeEECCCCc-cc--c-CCceEEEEEeeEEeCCccccCccEe------cceEEEEeeEEEcccce
Confidence 9999999999998777776654311 10 0 0135899999999 43211111121 127889999998743 4
Q ss_pred eEEEEeecCCCceeecEEEEeeEEccc
Q 011615 329 GVRIKTAVGRGAYVKEIYVRRMTMKTM 355 (481)
Q Consensus 329 Gi~Ikt~~g~~g~v~nI~f~ni~~~~~ 355 (481)
++.... -..+.+|+..++..
T Consensus 252 ~i~~~~-------~~~i~~egN~F~~~ 271 (346)
T 1pxz_A 252 AIGGSS-------NPTILSEGNSFTAP 271 (346)
T ss_dssp SEEEES-------CCEEEEESCEEECC
T ss_pred EEeccC-------CceEEEECCEEECC
Confidence 444321 12466666666553
No 54
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=98.16 E-value=6.5e-05 Score=74.92 Aligned_cols=149 Identities=14% Similarity=0.057 Sum_probs=96.9
Q ss_pred eEEEE-eeccEEEEeeEEeeCC------CCeEEeeccccEEEEeEEEECCCCCCCCCCcC---CCCCccEEEEecEEecC
Q 011615 195 LIEVM-FSDNVQISNLTLIDSP------SWNVHPVYSSNVLIQGLTIRAPIDSPNTDGIN---PDSCTNTRIEDNYIVSG 264 (481)
Q Consensus 195 ~i~~~-~~~nv~I~g~~i~ns~------~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~---~~~s~nV~I~n~~i~~g 264 (481)
.|.+. .++||.|++|+|++.. ..+|.+..+++|.|++|++... .|+.. ...+++|+|++|.|...
T Consensus 125 gl~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~~-----~d~~~~~~~~~s~~vTISnn~f~~~ 199 (359)
T 1qcx_A 125 GLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARI-----GRQHIVLGTSADNRVTISYSLIDGR 199 (359)
T ss_dssp CEEEETTCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEEE-----SSCSEEECSSCCEEEEEESCEEECB
T ss_pred eEEEecCCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeecc-----CcCceeecccccccEEEECcEecCC
Confidence 37777 8999999999999853 3578899999999999999863 34432 34789999999999854
Q ss_pred CceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEeccCcCCCEEEEEEEeeEEEcCC-ceEEEEeecCCCceee
Q 011615 265 DDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQ-SGVRIKTAVGRGAYVK 343 (481)
Q Consensus 265 DD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~~~~v~nI~v~n~~~~~~~-~Gi~Ikt~~g~~g~v~ 343 (481)
.|--+-..+...++......+.++++.++.+.....+.-.+. .-..+++.|+.+++.. +++.. +.-.
T Consensus 200 ~~~s~~~~G~H~~~~~l~G~sd~vT~~~N~f~~~~~R~Pr~r-----~~~~~hv~NN~~~n~~~~a~~~-------~~~~ 267 (359)
T 1qcx_A 200 SDYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGRMPKVQ-----GNTLLHAVNNLFHNFDGHAFEI-------GTGG 267 (359)
T ss_dssp CSSBTTSSSBBSCCEEECCSSEEEEEESCEEESBCSCTTEEC-----SSEEEEEESCEEEEEEEEEEEE-------CTTE
T ss_pred ccccccCcccccceeEEecCCCCeehcccEeccCcccCceec-----CCceEEEEccEEECccCeEEec-------CCCc
Confidence 321000000111111122235799999999986432222221 1236889999998752 33332 1124
Q ss_pred cEEEEeeEEccceeeEE
Q 011615 344 EIYVRRMTMKTMKYVFW 360 (481)
Q Consensus 344 nI~f~ni~~~~~~~~i~ 360 (481)
.|.+|+..+++..+|+.
T Consensus 268 ~i~~e~N~F~~~~~~~~ 284 (359)
T 1qcx_A 268 YVLAEGNVFQDVNVVVE 284 (359)
T ss_dssp EEEEESCEEEEEEEEEC
T ss_pred eEEEEeeEEECCCcccC
Confidence 68888888888888864
No 55
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.15 E-value=5.4e-06 Score=82.50 Aligned_cols=109 Identities=13% Similarity=0.114 Sum_probs=68.1
Q ss_pred CeEEeeccccEEEEeEEEECCCC-CCCCCCcCCCCCccEEEEecEEecC-Cceeee-cCCCCccC-cccCCceeeEEEEE
Q 011615 217 WNVHPVYSSNVLIQGLTIRAPID-SPNTDGINPDSCTNTRIEDNYIVSG-DDCVAV-KSGWDEYG-IKVGMPTQHLIIRR 292 (481)
Q Consensus 217 ~~i~~~~~~nv~i~~~~i~~~~~-~~n~DGI~~~~s~nV~I~n~~i~~g-DD~iai-~sg~~~~g-~~~~~~s~nI~I~n 292 (481)
.+|.+..++||.|+|++|+..+. ....|+|.+..++||.|++|.|..+ +.|... ......+| .+...++++|+|++
T Consensus 103 ~gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISn 182 (353)
T 1air_A 103 FGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSY 182 (353)
T ss_dssp SEEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEES
T ss_pred ceEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEe
Confidence 35555666777777777765321 2457999999999999999999753 222210 00000011 12223489999999
Q ss_pred EEEeCCCCceEEeccCcCCCEEEEEEEeeEEEcC
Q 011615 293 LICISPDSAAIALGSEMSGGIKDVRAEDITAINT 326 (481)
Q Consensus 293 ~~~~~~~~~gisIGs~~~~~v~nI~v~n~~~~~~ 326 (481)
|+|... ..+.-+|+.......+|++.++.|.+.
T Consensus 183 n~f~~h-~k~~LiG~sd~~~g~~vT~hhN~f~~~ 215 (353)
T 1air_A 183 NYIHGV-KKVGLDGSSSSDTGRNITYHHNYYNDV 215 (353)
T ss_dssp CEEEEE-EECCEESSSTTCCCCEEEEESCEEEEE
T ss_pred eEEcCC-CceeEECCCcCCCCceEEEEceEEcCC
Confidence 999963 345556775322226899999999765
No 56
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=98.11 E-value=6.4e-06 Score=83.55 Aligned_cols=97 Identities=20% Similarity=0.298 Sum_probs=67.2
Q ss_pred eEEeeccccEEEEeEEEECCCC---------------CCCCCCcCCCCCccEEEEecEEecC------------------
Q 011615 218 NVHPVYSSNVLIQGLTIRAPID---------------SPNTDGINPDSCTNTRIEDNYIVSG------------------ 264 (481)
Q Consensus 218 ~i~~~~~~nv~i~~~~i~~~~~---------------~~n~DGI~~~~s~nV~I~n~~i~~g------------------ 264 (481)
+|.+..++||.|+|++|+...+ ....|+|.+..++||.|++|+|..+
T Consensus 149 gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~ 228 (416)
T 1vbl_A 149 GFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQH 228 (416)
T ss_dssp EEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceeec
Confidence 3444456666666666654321 1356999999999999999999865
Q ss_pred CceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEeccCcCC----CEEEEEEEeeEEEcC
Q 011615 265 DDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSG----GIKDVRAEDITAINT 326 (481)
Q Consensus 265 DD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~~~----~v~nI~v~n~~~~~~ 326 (481)
|.++.++. .+++|+|++|+|.. +..++-||+.... +..+|++.++.|.+.
T Consensus 229 DGl~Di~~-----------~s~~VTISnn~f~~-h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~ 282 (416)
T 1vbl_A 229 DGALDIKN-----------SSDFITISYNVFTN-HDKVTLIGASDSRMADSGHLRVTLHHNYYKNV 282 (416)
T ss_dssp CCSEEEES-----------SCEEEEEESCEEEE-EEECCEECSCTTCGGGTTCCCEEEESCEEEEE
T ss_pred ccceeeec-----------CCCcEEEEeeEEcC-CCceeEeCCCCCCcccCCceEEEEECcEecCC
Confidence 33444443 38999999999996 3456667775421 234799999999765
No 57
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=98.01 E-value=1.2e-05 Score=81.22 Aligned_cols=96 Identities=17% Similarity=0.175 Sum_probs=67.8
Q ss_pred eEEeeccccEEEEeEEEECCCC---------------CCCCCCcCCCCCccEEEEecEEecC------------------
Q 011615 218 NVHPVYSSNVLIQGLTIRAPID---------------SPNTDGINPDSCTNTRIEDNYIVSG------------------ 264 (481)
Q Consensus 218 ~i~~~~~~nv~i~~~~i~~~~~---------------~~n~DGI~~~~s~nV~I~n~~i~~g------------------ 264 (481)
+|.+.. +||.|+|++|+...+ ....|+|.+..++||.|++|+|..+
T Consensus 144 gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~ 222 (399)
T 2o04_A 144 NFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHH 222 (399)
T ss_dssp EEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeecc
Confidence 345555 677777777765321 1356999999999999999999865
Q ss_pred CceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEeccCcCC----CEEEEEEEeeEEEcC
Q 011615 265 DDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSG----GIKDVRAEDITAINT 326 (481)
Q Consensus 265 DD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~~~----~v~nI~v~n~~~~~~ 326 (481)
|.++.++. ++.+|+|++|+|.. +..+.-||+.... +..+|++.++.|.+.
T Consensus 223 Dgl~Di~~-----------~s~~VTISnn~f~~-h~k~~LiG~sd~~~~d~g~~~vT~h~N~f~~~ 276 (399)
T 2o04_A 223 DGQTDASN-----------GANYITMSYNYYHD-HDKSSIFGSSDSKTSDDGKLKITLHHNRYKNI 276 (399)
T ss_dssp CCSEEEET-----------TCEEEEEESCEEEE-EEECCEESCCTTCGGGTTCCCEEEESCEEEEE
T ss_pred ccceeeec-----------cCCcEEEEeeEEcC-CCceeEeCCCCCCccccCceeEEEECcEecCC
Confidence 33444544 38999999999996 3456667765321 235899999999765
No 58
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=97.98 E-value=0.00014 Score=72.38 Aligned_cols=172 Identities=13% Similarity=0.108 Sum_probs=107.6
Q ss_pred eceEEEccceeeeCCCchhhhhccccCCCCCCCeeEEEE-eeccEEEEeeEEeeC------CCCeEEeeccccEEEEeEE
Q 011615 161 TDVVVTGGNATINGQGEPWWIKYRKKQFNVTRPYLIEVM-FSDNVQISNLTLIDS------PSWNVHPVYSSNVLIQGLT 233 (481)
Q Consensus 161 ~ni~I~G~~G~idG~g~~ww~~~~~~~~~~~rp~~i~~~-~~~nv~I~g~~i~ns------~~~~i~~~~~~nv~i~~~~ 233 (481)
..|.|.. +-||+|+|.. ..-....|.+. .++||.|++|+|++. ...+|.+..+++|.|++|+
T Consensus 102 ~~l~v~s-nkTI~G~G~~----------~~i~G~gl~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs 170 (359)
T 1idk_A 102 LGITVTS-NKSLIGEGSS----------GAIKGKGLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVT 170 (359)
T ss_dssp SCEEECS-SEEEEECTTT----------CEEESCCEEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCE
T ss_pred ceEEeCC-CceEEEecCC----------eEEecceEEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeE
Confidence 3466654 5799998751 01112358887 899999999999983 2357899999999999999
Q ss_pred EECCCCCCCCCCcC---CCCCccEEEEecEEecCCceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEeccCcC
Q 011615 234 IRAPIDSPNTDGIN---PDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMS 310 (481)
Q Consensus 234 i~~~~~~~n~DGI~---~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~~ 310 (481)
+... .|+.. ...+++|+|++|.|...++--+-..+...|+......+.+|++.++.+.....+.-.+.
T Consensus 171 ~s~~-----~d~~~~~g~~~s~~VTISnn~f~~~~~~s~~~~G~h~~~~~L~G~sd~vT~hhN~f~~~~~R~Pr~r---- 241 (359)
T 1idk_A 171 TARI-----GRQHYVLGTSADNRVSLTNNYIDGVSDYSATCDGYHYWAIYLDGDADLVTMKGNYIYHTSGRSPKVQ---- 241 (359)
T ss_dssp EEEE-----SSCSEEECCCTTCEEEEESCEEECBCSCBTTSSSBBSCCEEECCSSCEEEEESCEEESBCSCTTEEC----
T ss_pred eecC-----CCCcEEecccCcceEEEECcEecCCcccccccCccccceEEEEecCCCeEEEceEeecCcccCcccc----
Confidence 9863 34433 45789999999999854321000000111111122235799999999986432222221
Q ss_pred CCEEEEEEEeeEEEcC-CceEEEEeecCCCceeecEEEEeeEEccceeeEE
Q 011615 311 GGIKDVRAEDITAINT-QSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFW 360 (481)
Q Consensus 311 ~~v~nI~v~n~~~~~~-~~Gi~Ikt~~g~~g~v~nI~f~ni~~~~~~~~i~ 360 (481)
.-+.+++.|+.+++. .+|+.+. . -..|.+|+..+++...|+.
T Consensus 242 -~g~~~hv~NN~~~n~~~~~i~~~--~-----~~~i~~e~N~F~~~~~p~~ 284 (359)
T 1idk_A 242 -DNTLLHAVNNYWYDISGHAFEIG--E-----GGYVLAEGNVFQNVDTVLE 284 (359)
T ss_dssp -TTCEEEEESCEEEEEEEEEEEEC--T-----TCEEEEESCEEEEEEEEEE
T ss_pred -CCceEEEECCEEecccceEEecc--C-----CcEEEEEccEEECCCCcee
Confidence 112688889888874 2444431 1 1357777777777666654
No 59
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=97.96 E-value=2.7e-05 Score=77.59 Aligned_cols=93 Identities=22% Similarity=0.299 Sum_probs=65.2
Q ss_pred eccccEEEEeEEEECCCC-----------CCCCCCcCCCC-CccEEEEecEEecC------------------Cceeeec
Q 011615 222 VYSSNVLIQGLTIRAPID-----------SPNTDGINPDS-CTNTRIEDNYIVSG------------------DDCVAVK 271 (481)
Q Consensus 222 ~~~~nv~i~~~~i~~~~~-----------~~n~DGI~~~~-s~nV~I~n~~i~~g------------------DD~iai~ 271 (481)
..++||.|+|++|+...+ ....|+|.+.. ++||.|++|+|..+ |.++.++
T Consensus 111 ~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~DgllDi~ 190 (361)
T 1pe9_A 111 DGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQHDGALDIK 190 (361)
T ss_dssp GTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCCCCSEEEC
T ss_pred CCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCcceeeccceeeee
Confidence 355566666666654321 02478999998 99999999999864 4445555
Q ss_pred CCCCccCcccCCceeeEEEEEEEEeCCCCceEEeccCcCC-----CEEEEEEEeeEEEcC
Q 011615 272 SGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSG-----GIKDVRAEDITAINT 326 (481)
Q Consensus 272 sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~~~-----~v~nI~v~n~~~~~~ 326 (481)
.+ +.+|+|++|+|.. +..++-+|+.... +-.+|++.++.|.+.
T Consensus 191 ~~-----------s~~VTiS~n~f~~-h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~ 238 (361)
T 1pe9_A 191 RG-----------SDYVTISNSLIDQ-HDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRV 238 (361)
T ss_dssp TT-----------CEEEEEESCEEEE-EEECEEESCCTTCHHHHTTCCEEEEESCEEEEE
T ss_pred cC-----------CCcEEEEeeEEcC-CCceeEecCCCCCcccccCcceEEEECeEEcCc
Confidence 43 8999999999996 3456667765321 234899999999765
No 60
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=97.91 E-value=9.8e-05 Score=73.38 Aligned_cols=146 Identities=12% Similarity=0.029 Sum_probs=96.3
Q ss_pred eEEEEeeccEEEEeeEEeeCC-----CCeEEeeccccEEEEeEEEECCCCC--------CCCCCc-CC-CCCccEEEEec
Q 011615 195 LIEVMFSDNVQISNLTLIDSP-----SWNVHPVYSSNVLIQGLTIRAPIDS--------PNTDGI-NP-DSCTNTRIEDN 259 (481)
Q Consensus 195 ~i~~~~~~nv~I~g~~i~ns~-----~~~i~~~~~~nv~i~~~~i~~~~~~--------~n~DGI-~~-~~s~nV~I~n~ 259 (481)
.|.+..++||.|++|+|+..+ ...|.+..++||.|++|++...... ...||. ++ ..+.+|+|++|
T Consensus 104 gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn 183 (353)
T 1air_A 104 GIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYN 183 (353)
T ss_dssp EEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEESC
T ss_pred eEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEee
Confidence 678889999999999999654 3579999999999999999864211 113654 44 36899999999
Q ss_pred EEecCCceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEeccCcCCCEEEEEEEeeEEEcCC-ceEEEEeecCC
Q 011615 260 YIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQ-SGVRIKTAVGR 338 (481)
Q Consensus 260 ~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~~~~v~nI~v~n~~~~~~~-~Gi~Ikt~~g~ 338 (481)
.|...+-..-+++. +.++ ..+|++.++.|.+...+.-.+. . -.+++.|+.+++.. +|+... .
T Consensus 184 ~f~~h~k~~LiG~s-d~~~------g~~vT~hhN~f~~~~~R~Pr~r---~---G~~Hv~NN~~~n~~~~~~~~~--~-- 246 (353)
T 1air_A 184 YIHGVKKVGLDGSS-SSDT------GRNITYHHNYYNDVNARLPLQR---G---GLVHAYNNLYTNITGSGLNVR--Q-- 246 (353)
T ss_dssp EEEEEEECCEESSS-TTCC------CCEEEEESCEEEEEEECSCEEE---S---SEEEEESCEEEEESSCSEEEE--T--
T ss_pred EEcCCCceeEECCC-cCCC------CceEEEEceEEcCCcCCCCCCc---C---ceEEEEccEEECCCCceeccC--C--
Confidence 99865544333332 1111 1589999998875321222222 1 16788999998753 455432 1
Q ss_pred CceeecEEEEeeEEccceeeEE
Q 011615 339 GAYVKEIYVRRMTMKTMKYVFW 360 (481)
Q Consensus 339 ~g~v~nI~f~ni~~~~~~~~i~ 360 (481)
++ .|.+|+..++++..|+.
T Consensus 247 ~~---~i~~e~N~F~~~~~p~~ 265 (353)
T 1air_A 247 NG---QALIENNWFEKAINPVT 265 (353)
T ss_dssp TC---EEEEESCEEEEEESSEE
T ss_pred Cc---EEEEEceEEECCCCceE
Confidence 12 46777777776666764
No 61
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=97.82 E-value=6.5e-05 Score=74.95 Aligned_cols=122 Identities=11% Similarity=0.108 Sum_probs=93.0
Q ss_pred CCeeEEEEee-----ccEEEEeeEEeeC-----C------CCeEEeec-cccEEEEeEEEECCCCCCCCCCcCCCCCccE
Q 011615 192 RPYLIEVMFS-----DNVQISNLTLIDS-----P------SWNVHPVY-SSNVLIQGLTIRAPIDSPNTDGINPDSCTNT 254 (481)
Q Consensus 192 rp~~i~~~~~-----~nv~I~g~~i~ns-----~------~~~i~~~~-~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV 254 (481)
...+|.+... ++|+|++++|.+. . .-+|.+.. .+++.|++++|.. +.-||.++.+++.
T Consensus 121 ~g~a~~V~~~g~~r~s~V~~~~v~I~G~~~~~~G~s~~~~dAGI~v~~~~d~~~I~nn~i~~-----~~fGI~l~~a~~~ 195 (410)
T 2inu_A 121 APQAFLVKRAGDPRLSGIVFRDFCLDGVGFTPGKNSYHNGKTGIEVASDNDSFHITGMGFVY-----LEHALIVRGADAL 195 (410)
T ss_dssp SCEEEEECCCSSSCEECCEEESCEEECCCCSSSTTSCCCSCEEEEECSCEESCEEESCEEES-----CSEEEEETTEESC
T ss_pred ccceeEEeeccCcccCCcEECCEEEECCEeecCCCCcccCceeEEEeccCCeEEEECCEEec-----ccEEEEEccCCCc
Confidence 3445555442 6777777777766 3 22577765 8889999999997 5578999999999
Q ss_pred EEEecEEecCCceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCce--EEeccCcCCCEEEEEEEeeEE-EcCCceEE
Q 011615 255 RIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAA--IALGSEMSGGIKDVRAEDITA-INTQSGVR 331 (481)
Q Consensus 255 ~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~g--isIGs~~~~~v~nI~v~n~~~-~~~~~Gi~ 331 (481)
+|+++.|.....||.+... ++...|+++.+... ..| |.+. .+.+.+|+++.+ ...+.|+.
T Consensus 196 ~I~~N~I~e~GNgI~L~G~-----------~~~~~I~~N~i~~~-~dG~gIyl~-----ns~~~~I~~N~i~~~~R~gIh 258 (410)
T 2inu_A 196 RVNDNMIAECGNCVELTGA-----------GQATIVSGNHMGAG-PDGVTLLAE-----NHEGLLVTGNNLFPRGRSLIE 258 (410)
T ss_dssp EEESCEEESSSEEEEECSC-----------EESCEEESCEEECC-TTSEEEEEE-----SEESCEEESCEECSCSSEEEE
T ss_pred EEECCEEEecCCceeeccc-----------cccceEecceeeec-CCCCEEEEE-----eCCCCEEECCCcccCcceEEE
Confidence 9999999977788998763 68889999999986 345 6554 577888999977 55889999
Q ss_pred EEee
Q 011615 332 IKTA 335 (481)
Q Consensus 332 Ikt~ 335 (481)
+...
T Consensus 259 ~m~s 262 (410)
T 2inu_A 259 FTGC 262 (410)
T ss_dssp EESC
T ss_pred EEcc
Confidence 9753
No 62
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=97.71 E-value=0.00072 Score=68.49 Aligned_cols=143 Identities=10% Similarity=-0.005 Sum_probs=99.9
Q ss_pred eEEEEeeccEEEEeeEEeeCCCCeEEeeccccEEEEeEEEECCCCCCCCCCcCCCCC-ccEEEEecEEecCC--------
Q 011615 195 LIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSC-TNTRIEDNYIVSGD-------- 265 (481)
Q Consensus 195 ~i~~~~~~nv~I~g~~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s-~nV~I~n~~i~~gD-------- 265 (481)
.|.+ ..++++|+||+|+|+...+|.+.. .+.+|++|+|+.. ...||.+... .+.+|++|++....
T Consensus 109 ~i~i-~~~~~~i~gl~I~n~g~~GI~v~g-s~~~i~n~~i~~n----~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~ 182 (400)
T 1ru4_A 109 GFYV-TGDYWYFKGVEVTRAGYQGAYVIG-SHNTFENTAFHHN----RNTGLEINNGGSYNTVINSDAYRNYDPKKNGSM 182 (400)
T ss_dssp SEEE-CSSCEEEESEEEESCSSCSEEECS-SSCEEESCEEESC----SSCSEEECTTCCSCEEESCEEECCCCTTTTTSS
T ss_pred EEEE-ECCeEEEEeEEEEeCCCCcEEEeC-CCcEEEeEEEECC----CceeEEEEcccCCeEEEceEEEcccCccccCcc
Confidence 4555 788999999999998877888876 7889999999972 2349998764 48899999997642
Q ss_pred -ceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEeccCcCCCEEEEEEEeeEEEcCC-------------ceEE
Q 011615 266 -DCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQ-------------SGVR 331 (481)
Q Consensus 266 -D~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~~~~v~nI~v~n~~~~~~~-------------~Gi~ 331 (481)
|+++++.. ..++.+|++|+++...+.|+.+-. ....++|+||..++.. +|+.
T Consensus 183 ~dG~~~~~~----------~g~Gn~~~~~~~~~N~ddGidl~~----~~~~v~i~nn~a~~Ng~~~~~~n~~~gngnGf~ 248 (400)
T 1ru4_A 183 ADGFGPKQK----------QGPGNRFVGCRAWENSDDGFDLFD----SPQKVVIENSWAFRNGINYWNDSAFAGNGNGFK 248 (400)
T ss_dssp CCSEEECTT----------CCSCCEEESCEEESCSSCSEECTT----CCSCCEEESCEEESTTCCCSCCTTCCCCCCSEE
T ss_pred cceEEEEec----------ccCCeEEECCEEeecCCCcEEEEe----cCCCEEEEeEEEECCccccccccccccCCCCEE
Confidence 45665542 137889999999987677888742 2235799999987542 2333
Q ss_pred EEeecCCCceeecEEEEeeEEcc-ceeeEEE
Q 011615 332 IKTAVGRGAYVKEIYVRRMTMKT-MKYVFWM 361 (481)
Q Consensus 332 Ikt~~g~~g~v~nI~f~ni~~~~-~~~~i~i 361 (481)
+.. .+...+.+++|....+ ...+|..
T Consensus 249 lgg----~~~~~~~~v~nn~a~~N~~~G~~~ 275 (400)
T 1ru4_A 249 LGG----NQAVGNHRITRSVAFGNVSKGFDQ 275 (400)
T ss_dssp CCC----TTCCCCCEEESCEEESCSSEEEEC
T ss_pred Eec----cCCcCCEEEEeeEEECCcCcCEee
Confidence 311 1234566777666654 4555543
No 63
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=97.65 E-value=0.0014 Score=64.77 Aligned_cols=62 Identities=8% Similarity=0.058 Sum_probs=39.3
Q ss_pred eeccEEEEeeEEeeCCC--------------------CeEE-eeccccEEEEeEEEECCCCCCCCCCcCCCCCccEEEEe
Q 011615 200 FSDNVQISNLTLIDSPS--------------------WNVH-PVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIED 258 (481)
Q Consensus 200 ~~~nv~I~g~~i~ns~~--------------------~~i~-~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n 258 (481)
.+++++++||+|+|+.. -.+. ...++++.+.+|+|.. ..|.+.... .+..+++
T Consensus 94 ~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G-----~QDTLy~~~-gr~~~~~ 167 (342)
T 2nsp_A 94 SAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVG-----YQATLYVSG-GRSFFSD 167 (342)
T ss_dssp CSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEEC-----STTCEEECS-SEEEEES
T ss_pred ECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEec-----ccceEEECC-CCEEEEc
Confidence 47899999999998751 1232 1356777777777775 345555543 3566777
Q ss_pred cEEecCCce
Q 011615 259 NYIVSGDDC 267 (481)
Q Consensus 259 ~~i~~gDD~ 267 (481)
|.|...=|-
T Consensus 168 c~I~G~vDF 176 (342)
T 2nsp_A 168 CRISGTVDF 176 (342)
T ss_dssp CEEEESEEE
T ss_pred CEEEeceEE
Confidence 777765443
No 64
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=97.51 E-value=0.0014 Score=65.11 Aligned_cols=124 Identities=14% Similarity=0.057 Sum_probs=83.3
Q ss_pred eEEEEeeccEEEEeeEEeeCC---------------CCeEEeeccccEEEEeEEEECCCC---------CC---CCCC-c
Q 011615 195 LIEVMFSDNVQISNLTLIDSP---------------SWNVHPVYSSNVLIQGLTIRAPID---------SP---NTDG-I 246 (481)
Q Consensus 195 ~i~~~~~~nv~I~g~~i~ns~---------------~~~i~~~~~~nv~i~~~~i~~~~~---------~~---n~DG-I 246 (481)
.|.+..++||.|++|+|++.. ..+|.+..++||.|++|++....+ +. -.|| +
T Consensus 97 gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~ 176 (355)
T 1pcl_A 97 SLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGAL 176 (355)
T ss_pred EEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccce
Confidence 477788999999999998641 346889999999999999986421 00 1466 3
Q ss_pred CCC-CCccEEEEecEEecCCceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEeccCcCCCEEEEEEEeeEEEc
Q 011615 247 NPD-SCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAIN 325 (481)
Q Consensus 247 ~~~-~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~~~~v~nI~v~n~~~~~ 325 (481)
++. .+++|+|++|.|...+-+.-+++. +.+.. ......+|++.+|.|.+...+.-.+. . -.+++.|+.+.+
T Consensus 177 Di~~~s~~VTiS~n~f~~h~k~~LiG~s-d~~~~-~d~g~~~vT~hhN~f~~~~~R~PrvR---~---G~~Hv~NN~~~~ 248 (355)
T 1pcl_A 177 DIKKGSDYVTISYSRFELHDKTILIGHS-DSNGS-QDSGKLRVTFHNNVFDRVTERAPRVR---F---GSIHAYNNVYLG 248 (355)
T ss_pred eeecCCCcEEEEeeEEcCCCceEEeCCC-CCCcc-cccCcceEEEECcEEeCCcccCCcee---c---ceEEEEcceEEc
Confidence 444 689999999999987666555443 11110 01113479999999976432322221 1 138889999876
Q ss_pred C
Q 011615 326 T 326 (481)
Q Consensus 326 ~ 326 (481)
.
T Consensus 249 ~ 249 (355)
T 1pcl_A 249 D 249 (355)
T ss_pred c
Confidence 4
No 65
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=97.46 E-value=0.00054 Score=69.43 Aligned_cols=123 Identities=15% Similarity=0.028 Sum_probs=82.1
Q ss_pred eEEEEeeccEEEEeeEEeeC-------------------CCCeEEeeccccEEEEeEEEECCCC------------CCCC
Q 011615 195 LIEVMFSDNVQISNLTLIDS-------------------PSWNVHPVYSSNVLIQGLTIRAPID------------SPNT 243 (481)
Q Consensus 195 ~i~~~~~~nv~I~g~~i~ns-------------------~~~~i~~~~~~nv~i~~~~i~~~~~------------~~n~ 243 (481)
.|.+..++||.|++|+|++. ....|.+..++||.|++|++....+ ..-.
T Consensus 149 gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~ 228 (416)
T 1vbl_A 149 GFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQH 228 (416)
T ss_dssp EEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceeec
Confidence 58888999999999999863 2356899999999999999996421 0124
Q ss_pred CCc-CCC-CCccEEEEecEEecCCceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEeccCcCCCEEEEEEEee
Q 011615 244 DGI-NPD-SCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDI 321 (481)
Q Consensus 244 DGI-~~~-~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~~~~v~nI~v~n~ 321 (481)
||. ++. .+++|+|++|.|...+-+.-+++. +.+. ....--+|++.+|.|.+...+.-.+. . + .+++.|+
T Consensus 229 DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~s-d~~~--~d~g~~~VT~hhN~f~~~~~R~Pr~R---~-G--~~Hv~NN 299 (416)
T 1vbl_A 229 DGALDIKNSSDFITISYNVFTNHDKVTLIGAS-DSRM--ADSGHLRVTLHHNYYKNVTQRLPRVR---F-G--QVHIYNN 299 (416)
T ss_dssp CCSEEEESSCEEEEEESCEEEEEEECCEECSC-TTCG--GGTTCCCEEEESCEEEEEEECSSEES---S-C--EEEEESC
T ss_pred ccceeeecCCCcEEEEeeEEcCCCceeEeCCC-CCCc--ccCCceEEEEECcEecCCccCCcccc---c-c--eEEEEcc
Confidence 663 343 689999999999976655545442 1111 01112479999998875321222221 1 1 4889999
Q ss_pred EEEcC
Q 011615 322 TAINT 326 (481)
Q Consensus 322 ~~~~~ 326 (481)
.+.+.
T Consensus 300 ~~~n~ 304 (416)
T 1vbl_A 300 YYEFS 304 (416)
T ss_dssp EEEEC
T ss_pred eEECC
Confidence 99864
No 66
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=97.39 E-value=0.0034 Score=61.51 Aligned_cols=143 Identities=15% Similarity=0.145 Sum_probs=93.6
Q ss_pred eeceEEEcc--ceeeeCCCchhhhhccccCCCCCCCeeEEEEeeccEEEEeeEEeeCC---CCeEEeec-cccEEEEeEE
Q 011615 160 LTDVVVTGG--NATINGQGEPWWIKYRKKQFNVTRPYLIEVMFSDNVQISNLTLIDSP---SWNVHPVY-SSNVLIQGLT 233 (481)
Q Consensus 160 ~~ni~I~G~--~G~idG~g~~ww~~~~~~~~~~~rp~~i~~~~~~nv~I~g~~i~ns~---~~~i~~~~-~~nv~i~~~~ 233 (481)
.+|++|.|. +.+|+|. .|.+..++||.|++++|++.. ...|.+.. ++||.|++|+
T Consensus 78 ~sn~TI~G~g~~~~i~G~-------------------gl~i~~a~NVIIrNl~i~~~~~~~~DaI~i~~~s~nVWIDH~s 138 (326)
T 3vmv_A 78 IKNISIIGVGTNGEFDGI-------------------GIRLSNAHNIIIQNVSIHHVREGEGTAIEVTDDSKNVWIDHNE 138 (326)
T ss_dssp EEEEEEEECTTCCEEESC-------------------CEEEESEEEEEEESCEEECCCSTTSCSEEEETTCEEEEEESCE
T ss_pred CCCeEEEecCCCeEEeCc-------------------EEEEEecceEEEECeEEEcCCCCCCCeEEEecCCCcEEEEeeE
Confidence 468888885 1245543 477789999999999999864 45799997 9999999999
Q ss_pred EECCC----CCCCCCCc-CCC-CCccEEEEecEEecCCceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEecc
Q 011615 234 IRAPI----DSPNTDGI-NPD-SCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGS 307 (481)
Q Consensus 234 i~~~~----~~~n~DGI-~~~-~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs 307 (481)
+.... +....||. ++. .+.+|+|++|.|...+-+.-+++. +.+.. .-.+|++.++.+.....+.-.+.
T Consensus 139 ~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h~k~~LiG~s-d~~~~----~~~~vT~~~N~f~~~~~R~Pr~r- 212 (326)
T 3vmv_A 139 FYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENHWKTMLVGHT-DNASL----APDKITYHHNYFNNLNSRVPLIR- 212 (326)
T ss_dssp EECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEEEECEEECSS-SCGGG----CCEEEEEESCEEEEEEECTTEEE-
T ss_pred EeccccCCcCccccCcceEecCCCceEEEEceEEecCceEEEECCC-CCCcc----cCccEEEEeeEecCCcCcCCccc-
Confidence 98532 11223554 443 589999999999875555444432 11100 02478999888875321111221
Q ss_pred CcCCCEEEEEEEeeEEEcC-CceEEE
Q 011615 308 EMSGGIKDVRAEDITAINT-QSGVRI 332 (481)
Q Consensus 308 ~~~~~v~nI~v~n~~~~~~-~~Gi~I 332 (481)
. -.+++.|+.+++. ..++..
T Consensus 213 --~---G~~Hv~NN~~~n~~~~~~~~ 233 (326)
T 3vmv_A 213 --Y---ADVHMFNNYFKDINDTAINS 233 (326)
T ss_dssp --S---CEEEEESCEEEEESSCSEEE
T ss_pred --C---CcEEEEccEEECCCceEEee
Confidence 1 1688899999875 356554
No 67
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=97.36 E-value=0.00061 Score=68.72 Aligned_cols=123 Identities=16% Similarity=0.105 Sum_probs=81.1
Q ss_pred eEEEEeeccEEEEeeEEeeC-------------------CCCeEEeeccccEEEEeEEEECCCC------------CCCC
Q 011615 195 LIEVMFSDNVQISNLTLIDS-------------------PSWNVHPVYSSNVLIQGLTIRAPID------------SPNT 243 (481)
Q Consensus 195 ~i~~~~~~nv~I~g~~i~ns-------------------~~~~i~~~~~~nv~i~~~~i~~~~~------------~~n~ 243 (481)
.|.+.. +||.|++|+|++. ....|.+..++||.|++|++....+ ..-.
T Consensus 144 gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~ 222 (399)
T 2o04_A 144 NFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHH 222 (399)
T ss_dssp EEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeecc
Confidence 577777 9999999999763 2356889999999999999996421 0124
Q ss_pred CCc-CCC-CCccEEEEecEEecCCceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEeccCcCCCEEEEEEEee
Q 011615 244 DGI-NPD-SCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDI 321 (481)
Q Consensus 244 DGI-~~~-~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~~~~v~nI~v~n~ 321 (481)
||. ++. .+.+|+|++|.|...+-+.-+++. +.+. ....-.+|++.+|.|.+...+.-.+. . + .+++-|+
T Consensus 223 Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~s-d~~~--~d~g~~~vT~h~N~f~~~~~R~Pr~R---~-G--~~Hv~NN 293 (399)
T 2o04_A 223 DGQTDASNGANYITMSYNYYHDHDKSSIFGSS-DSKT--SDDGKLKITLHHNRYKNIVQAAPRVR---F-G--QVHVYNN 293 (399)
T ss_dssp CCSEEEETTCEEEEEESCEEEEEEECCEESCC-TTCG--GGTTCCCEEEESCEEEEEEECTTEES---S-C--EEEEESC
T ss_pred ccceeeeccCCcEEEEeeEEcCCCceeEeCCC-CCCc--cccCceeEEEECcEecCCcccCCCcc---c-c--eEEEEcc
Confidence 664 443 689999999999876555444432 1111 01112489999998875321222221 1 1 4889999
Q ss_pred EEEcCC
Q 011615 322 TAINTQ 327 (481)
Q Consensus 322 ~~~~~~ 327 (481)
.+.+..
T Consensus 294 ~~~n~~ 299 (399)
T 2o04_A 294 YYEGST 299 (399)
T ss_dssp EEECCT
T ss_pred eEECCC
Confidence 998653
No 68
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=97.29 E-value=0.00087 Score=66.68 Aligned_cols=124 Identities=15% Similarity=0.096 Sum_probs=80.2
Q ss_pred eEEE---EeeccEEEEeeEEeeCC---------------CCeEEeec-cccEEEEeEEEECCCC------------CCCC
Q 011615 195 LIEV---MFSDNVQISNLTLIDSP---------------SWNVHPVY-SSNVLIQGLTIRAPID------------SPNT 243 (481)
Q Consensus 195 ~i~~---~~~~nv~I~g~~i~ns~---------------~~~i~~~~-~~nv~i~~~~i~~~~~------------~~n~ 243 (481)
.|.+ ..++||.|++|+|++.. ...|.+.. ++||.|++|++....+ ..-.
T Consensus 104 gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~ 183 (361)
T 1pe9_A 104 SLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQH 183 (361)
T ss_dssp EEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCC
T ss_pred EEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCcceeec
Confidence 5778 58999999999998632 44789999 9999999999996421 0114
Q ss_pred CC-cCCC-CCccEEEEecEEecCCceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEeccCcCCCEEEEEEEee
Q 011615 244 DG-INPD-SCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDI 321 (481)
Q Consensus 244 DG-I~~~-~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~~~~v~nI~v~n~ 321 (481)
|| +++. .+++|+|++|.|...+-+.-+++. +.+.. .....-+|++.++.|.+...+.-.+. . + .+++.|+
T Consensus 184 DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~s-d~~~~-~d~g~~~vT~hhN~f~~~~~R~Pr~R---~-G--~~Hv~NN 255 (361)
T 1pe9_A 184 DGALDIKRGSDYVTISNSLIDQHDKTMLIGHS-DSNGS-QDKGKLHVTLFNNVFNRVTERAPRVR---Y-G--SIHSFNN 255 (361)
T ss_dssp CCSEEECTTCEEEEEESCEEEEEEECEEESCC-TTCHH-HHTTCCEEEEESCEEEEEEECSSEES---S-C--EEEEESC
T ss_pred cceeeeecCCCcEEEEeeEEcCCCceeEecCC-CCCcc-cccCcceEEEECeEEcCccccCcccc---c-c--eEEEEcc
Confidence 66 3454 689999999999875555444432 11100 00012479999988875321111121 1 1 4889999
Q ss_pred EEEcC
Q 011615 322 TAINT 326 (481)
Q Consensus 322 ~~~~~ 326 (481)
.+.+.
T Consensus 256 ~~~~~ 260 (361)
T 1pe9_A 256 VFKGD 260 (361)
T ss_dssp EEEEE
T ss_pred eEecc
Confidence 99754
No 69
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=97.25 E-value=0.0012 Score=65.03 Aligned_cols=149 Identities=15% Similarity=0.082 Sum_probs=95.7
Q ss_pred eEEEE-eeccEEEEeeEEeeCC----CCeEEee-----ccccEEEEeEEEECCCC------CCCCCCc-CCC-CCccEEE
Q 011615 195 LIEVM-FSDNVQISNLTLIDSP----SWNVHPV-----YSSNVLIQGLTIRAPID------SPNTDGI-NPD-SCTNTRI 256 (481)
Q Consensus 195 ~i~~~-~~~nv~I~g~~i~ns~----~~~i~~~-----~~~nv~i~~~~i~~~~~------~~n~DGI-~~~-~s~nV~I 256 (481)
.|.+. .++||.|++|+|++.. ...|.+. .++||.|++|++....+ ...-||. ++. .+.+|+|
T Consensus 87 gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTI 166 (330)
T 2qy1_A 87 GIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTV 166 (330)
T ss_dssp EEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEE
T ss_pred eEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEEE
Confidence 57888 8999999999999864 5678888 69999999999975321 0111543 443 5899999
Q ss_pred EecEEecCCceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEeccCcCCCEEEEEEEeeEEEcC-CceEEEEee
Q 011615 257 EDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINT-QSGVRIKTA 335 (481)
Q Consensus 257 ~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~~~~v~nI~v~n~~~~~~-~~Gi~Ikt~ 335 (481)
++|.|...+-+.-+++. +.+... ...+|++.++.|.+...+.-.+. . + .+++.|+.+.+. .+++...
T Consensus 167 Snn~f~~h~k~~L~G~s-d~~~~~---~~~~vT~h~N~f~~~~~R~Pr~r---~-G--~~hv~NN~~~n~~~~~i~~~-- 234 (330)
T 2qy1_A 167 SYNYVYNYQKVALNGYS-DSDTKN---SAARTTYHHNRFENVESRVPLQR---F-G--LSHIYNNYFNNVTTSGINVR-- 234 (330)
T ss_dssp ESCEEEEEEECCEESSS-TTCGGG---GGCEEEEESCEEEEEEECTTEEE---S-S--EEEEESCEEEEECSCSEEEE--
T ss_pred EcceeccCCeEEEECCC-CccccC---CCceEEEECcEEcCCCCCCCcee---c-c--eEEEEeeEEEcccceEeccC--
Confidence 99999876555444432 111100 12589999998875321111221 1 1 588999999875 3555432
Q ss_pred cCCCceeecEEEEeeEEccceeeEE
Q 011615 336 VGRGAYVKEIYVRRMTMKTMKYVFW 360 (481)
Q Consensus 336 ~g~~g~v~nI~f~ni~~~~~~~~i~ 360 (481)
. + ..|.+|+..+++...|+.
T Consensus 235 ~--~---~~i~~e~N~F~~~~~p~~ 254 (330)
T 2qy1_A 235 M--G---GIAKIESNYFENIKNPVT 254 (330)
T ss_dssp T--T---CEEEEESCEEEEEESSEE
T ss_pred C--C---cEEEEEccEEECCCCcee
Confidence 1 1 246667777666666654
No 70
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=96.64 E-value=0.003 Score=63.28 Aligned_cols=132 Identities=10% Similarity=0.034 Sum_probs=83.1
Q ss_pred EEEEeeccEEEEeeEEeeC--CCC--------eEEeeccccEEEEeEEEE--CCCCCCCCCCcCCCCCccEEEE-ecEEe
Q 011615 196 IEVMFSDNVQISNLTLIDS--PSW--------NVHPVYSSNVLIQGLTIR--APIDSPNTDGINPDSCTNTRIE-DNYIV 262 (481)
Q Consensus 196 i~~~~~~nv~I~g~~i~ns--~~~--------~i~~~~~~nv~i~~~~i~--~~~~~~n~DGI~~~~s~nV~I~-n~~i~ 262 (481)
+.+.+.+|+.|.|--..+. ..| ......+++|.+++++.. ... ..-+|+..|+++++. +..+.
T Consensus 140 I~~~~VeNIaITG~GTIDG~g~n~t~e~~~~Rq~~~~~fdnV~Vn~Vt~~v~~Sg----~WTIhPi~Cqnvt~r~gL~f~ 215 (514)
T 2vbk_A 140 TIGRYLRNIRVTGNNTCNGIDTNITAEDSVIRQVYGWVFDNVMVNEVETAYLMQG----LWHSKFIACQAGTCRVGLHFL 215 (514)
T ss_dssp CSCEEEESCEEECCSSSEEEEESCCTTCSSCCCEESEEEESCEEEEEEEEEEEES----EEEEEEESCEEEEEEEEEEEE
T ss_pred ccccCceEEEEECCCeEeCCCCCccccceeeeccceEEeeeEEEEeEEEeEeccC----cEEEeEeccCceecccCcccc
Confidence 4456667777766322211 011 133345789999999653 211 133777788888876 44442
Q ss_pred cCCceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEeccC-------cCCCEEEEEEEeeEEEcCCceEEEEee
Q 011615 263 SGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSE-------MSGGIKDVRAEDITAINTQSGVRIKTA 335 (481)
Q Consensus 263 ~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~-------~~~~v~nI~v~n~~~~~~~~Gi~Ikt~ 335 (481)
.+ ++||.|.||+|.-+ +++|+|.|. .....+||. ..++-|.+.
T Consensus 216 --------eS------------CrNV~IsnC~FsVG-DdciaiksGk~~~~~~~~~~se~~~---------hgav~igSE 265 (514)
T 2vbk_A 216 --------GQ------------CVSVSVSSCHFSRG-NYSADESFGIRIQPQTYAWSSEAVR---------SEAIILDSE 265 (514)
T ss_dssp --------SC------------CEEEEEESCEEECT-TSCCTTCEEEEEECBCCTTTSSCBC---------CEEEEEESS
T ss_pred --------CC------------CCeEEEeccEEecC-cceeeeecCceecccccCCcchhcc---------cccEEECch
Confidence 12 89999999999986 788888774 122344544 356667665
Q ss_pred -cCCCceeec-EEEEeeEEccceeeEEEEcccC
Q 011615 336 -VGRGAYVKE-IYVRRMTMKTMKYVFWMTGDYG 366 (481)
Q Consensus 336 -~g~~g~v~n-I~f~ni~~~~~~~~i~i~~~y~ 366 (481)
. .|.|+| |+++++.+.+... ++-.||
T Consensus 266 ~m--~~Gvk~~v~v~~Clf~~td~---~~~~~~ 293 (514)
T 2vbk_A 266 TM--CIGFKNAVYVHDCLDLHMEQ---LDLDYC 293 (514)
T ss_dssp EE--EESCSEEEEESCCEEEEEES---EEEEEE
T ss_pred hh--cccccccEEEEeeeccCCcc---cccccc
Confidence 3 467899 9999999887643 344566
No 71
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=96.51 E-value=0.34 Score=48.68 Aligned_cols=145 Identities=11% Similarity=0.071 Sum_probs=71.9
Q ss_pred EEEEeeccEEEEeeEEeeCCCC----------eEEeeccccEEEEeEEEECCCCCCCC------CCcCCCCCccEEEEec
Q 011615 196 IEVMFSDNVQISNLTLIDSPSW----------NVHPVYSSNVLIQGLTIRAPIDSPNT------DGINPDSCTNTRIEDN 259 (481)
Q Consensus 196 i~~~~~~nv~I~g~~i~ns~~~----------~i~~~~~~nv~i~~~~i~~~~~~~n~------DGI~~~~s~nV~I~n~ 259 (481)
......+++.++||+|+|.... .+. ...+...+.+|+|....+-..+ .+...+....-..++|
T Consensus 195 T~~V~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~-v~gDr~~fy~C~f~G~QDTLy~~~~~~~~~~~~d~~gRqyy~~C 273 (422)
T 3grh_A 195 VFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALR-TDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNS 273 (422)
T ss_dssp SEEECCTTCEEEEEEEEETTGGGSCSSCCCCCSEE-ECCSSEEEEEEEEECSTTCEEECCCCTTCSCCSSCCCEEEEESC
T ss_pred EEEEECCCEEEEeeEEEeCCCCCCCCCCCceEEEE-ecCCcEEEEeeEEEeecceeeeccccccccccccccccEEEEec
Confidence 3445678999999999987432 122 3456777777777764321100 0011122345666777
Q ss_pred EEecCCceeeecCCCCccCcccCCceeeEEEEEEEEeCCC-----CceEEeccCcCCCEEEEEEEeeEEEcCC-ceEEE-
Q 011615 260 YIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPD-----SAAIALGSEMSGGIKDVRAEDITAINTQ-SGVRI- 332 (481)
Q Consensus 260 ~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~-----~~gisIGs~~~~~v~nI~v~n~~~~~~~-~Gi~I- 332 (481)
.|...=|-|- + .-...+++|.+..-. ..-|.-.+.....-..+.|.||++.... ....+
T Consensus 274 yIeGtVDFIF-G-------------~a~AvFe~C~I~s~~~~~~~~g~ITA~~t~~~~~~Gfvf~nC~ita~~~~~~yLG 339 (422)
T 3grh_A 274 YIEGDVDIVS-G-------------RGAVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFNAFGDGVAQLG 339 (422)
T ss_dssp EEEESEEEEE-E-------------SSEEEEESCEEEECCSSCSSCCEEEEECCBTTCCCCEEEESCEEEECSSSCBEEE
T ss_pred EEeccccEEc-c-------------CceEEEEeeEEEEecCCCCCceEEEecCCCCCCCCEEEEECCEEEeCCCCCEEcC
Confidence 7766544331 1 234566666665321 1223333322223345667777776432 12233
Q ss_pred EeecCCCceeecEEEEeeEEccc
Q 011615 333 KTAVGRGAYVKEIYVRRMTMKTM 355 (481)
Q Consensus 333 kt~~g~~g~v~nI~f~ni~~~~~ 355 (481)
..|....-..-.|.|.+..|.+.
T Consensus 340 RPW~~ysrt~~qVVf~~s~l~~~ 362 (422)
T 3grh_A 340 RSLDVDANTNGQVVIRDSAINEG 362 (422)
T ss_dssp EEECCSTTBCCEEEEESCEECTT
T ss_pred CCCCCcCCcCccEEEEeCcccCc
Confidence 23332111123466666666654
No 72
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=96.18 E-value=0.14 Score=45.37 Aligned_cols=110 Identities=19% Similarity=0.252 Sum_probs=59.6
Q ss_pred ccEEEEeEEEECCCCCCCCCCcCCCCCccEEEEecEEec-CCceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceE
Q 011615 225 SNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVS-GDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAI 303 (481)
Q Consensus 225 ~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~-gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gi 303 (481)
++.+++|+.|-. +..||||.. -+-+|+|..+.. ++|++.+++ +..++|.+.-.....+--|
T Consensus 52 ~GaTLkNvIIG~----~~~dGIHC~--G~ctl~NVwwedVcEDA~T~kg------------~g~~~I~GGgA~~A~DKV~ 113 (196)
T 3t9g_A 52 KGANLKNVIIGA----PGCDGIHCY--GDNVVENVVWEDVGEDALTVKS------------EGVVEVIGGSAKEAADKVF 113 (196)
T ss_dssp TTCEEEEEEECS----CCTTCEEEC--SSEEEEEEEESSCCSCSEEECS------------SEEEEEESCEEEEEEEEEE
T ss_pred CCCEEEEEEECC----CCcCcEEEc--CCEeEEEEEeeeeeceeeEEcC------------CCeEEEECCCccCCCceEE
Confidence 456677777743 457899875 457788888865 788999885 2344454433332100011
Q ss_pred EeccCcCCCEEEEEEEeeEEEcCCceEEEEeecCCCceeecEEEEeeEEccceeeEE
Q 011615 304 ALGSEMSGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVFW 360 (481)
Q Consensus 304 sIGs~~~~~v~nI~v~n~~~~~~~~Gi~Ikt~~g~~g~v~nI~f~ni~~~~~~~~i~ 360 (481)
..- +--.+.|+|.+..+ .|--..+-. ....=++|.++|+++.++...++
T Consensus 114 Q~N-----g~Gtv~I~nF~~~~--~GKl~RSCG-nc~~~r~v~i~~v~~~n~k~~l~ 162 (196)
T 3t9g_A 114 QLN-----APCTFKVKNFTATN--IGKLVRQNG-NTTFKVVIYLEDVTLNNVKSCVA 162 (196)
T ss_dssp EEC-----SSEEEEEEEEEEEE--EEEEEEECT-TCCSCEEEEEEEEEEEEEEEEEE
T ss_pred EEC-----CCceEEEeeEEEcc--CCEEEEcCC-CCCceeEEEEeCeEEeCCEEEEE
Confidence 111 11245555555543 233333321 12334677777777777665554
No 73
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=95.30 E-value=0.91 Score=40.15 Aligned_cols=163 Identities=12% Similarity=0.118 Sum_probs=103.2
Q ss_pred eeeeCCCchhhhhccc-cCCCCCCCeeEEEEeeccEEEEeeEEeeCCCCeEEeeccccEEEEeEEEECCCCCCCCCCcCC
Q 011615 170 ATINGQGEPWWIKYRK-KQFNVTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINP 248 (481)
Q Consensus 170 G~idG~g~~ww~~~~~-~~~~~~rp~~i~~~~~~nv~I~g~~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~ 248 (481)
.++||.+..|-..... ..........|.+ -+..+|+|+.|-..+..+++.. -+.+|+|+.... -..|.+.+
T Consensus 21 ~~fDGg~k~y~~~~~~~g~Q~E~q~~vF~l--e~GaTLkNvIIG~~~~dGIHC~--G~ctl~NVwwed----VcEDA~T~ 92 (196)
T 3t9g_A 21 QTYDGKGIKIIAQGMGDGSQSENQKPIFKL--EKGANLKNVIIGAPGCDGIHCY--GDNVVENVVWED----VGEDALTV 92 (196)
T ss_dssp CEEEEEEEEEEESSSCCSSSCSCCCCSEEE--CTTCEEEEEEECSCCTTCEEEC--SSEEEEEEEESS----CCSCSEEE
T ss_pred ceEcCCCeEEeCCCCCCCccccCCCceEEE--cCCCEEEEEEECCCCcCcEEEc--CCEeEEEEEeee----eeceeeEE
Confidence 4777766554321000 0011122334443 3578899999977778888885 467899998876 45688888
Q ss_pred CCCccEEEEecEEecCCceeeecCCCCccCcccCCceeeEEEEEEEEeCCCCceEEeccCc-CCCEEEEEEEeeEEEcCC
Q 011615 249 DSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEM-SGGIKDVRAEDITAINTQ 327 (481)
Q Consensus 249 ~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~-~~~v~nI~v~n~~~~~~~ 327 (481)
.++..++|.+.-..+.+|=|--..+ .-.+.|+|.+... .|--+-|-. ...-++|.++|+++.+..
T Consensus 93 kg~g~~~I~GGgA~~A~DKV~Q~Ng-----------~Gtv~I~nF~~~~---~GKl~RSCGnc~~~r~v~i~~v~~~n~k 158 (196)
T 3t9g_A 93 KSEGVVEVIGGSAKEAADKVFQLNA-----------PCTFKVKNFTATN---IGKLVRQNGNTTFKVVIYLEDVTLNNVK 158 (196)
T ss_dssp CSSEEEEEESCEEEEEEEEEEEECS-----------SEEEEEEEEEEEE---EEEEEEECTTCCSCEEEEEEEEEEEEEE
T ss_pred cCCCeEEEECCCccCCCceEEEECC-----------CceEEEeeEEEcc---CCEEEEcCCCCCceeEEEEeCeEEeCCE
Confidence 8778899999998888777654444 4567888877763 222221111 123479999999998764
Q ss_pred ceEEEEeecCCCceeecEEEEeeEEccceeeE
Q 011615 328 SGVRIKTAVGRGAYVKEIYVRRMTMKTMKYVF 359 (481)
Q Consensus 328 ~Gi~Ikt~~g~~g~v~nI~f~ni~~~~~~~~i 359 (481)
..| +++.. .-..+++.|+++.++....
T Consensus 159 ~~l-~rtdS----~~~~~~~~n~~~~~~~~~~ 185 (196)
T 3t9g_A 159 SCV-AKSDS----PVSELWYHNLNVNNCKTLF 185 (196)
T ss_dssp EEE-EECCC----TTCEEEEEEEEEEEEEEEE
T ss_pred EEE-EEcCC----CCCEEEEecceecCCCcce
Confidence 332 23322 2356888888888876644
No 74
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=94.67 E-value=0.28 Score=43.55 Aligned_cols=42 Identities=24% Similarity=0.438 Sum_probs=25.4
Q ss_pred ccEEEEeEEEECCCCCCCCCCcCCCCCccEEEEecEEec-CCceeeecC
Q 011615 225 SNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVS-GDDCVAVKS 272 (481)
Q Consensus 225 ~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~-gDD~iai~s 272 (481)
++.+++|+.|-. +..||||... +-+|+|..+.. +.|++.+++
T Consensus 48 ~GaTLkNvIIG~----~~~dGIHC~G--~CtleNVwwedVcEDA~T~k~ 90 (197)
T 1ee6_A 48 AGASLKNVVIGA----PAADGVHCYG--DCTITNVIWEDVGEDALTLKS 90 (197)
T ss_dssp TTEEEEEEEECS----SCTTCEEEES--CEEEEEEEESSCCSCSEEEEE
T ss_pred CCCEEEEEEEcC----CCcccEEEcC--ceeEEEEEeeeccccccEEcC
Confidence 345566665543 3567777643 36667766654 677777764
No 75
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=94.33 E-value=0.21 Score=51.74 Aligned_cols=144 Identities=11% Similarity=0.018 Sum_probs=98.3
Q ss_pred eeEEEE----eeccEEEEeeEEeeC-CCCeEEeeccccEEEEeEEEECCCCCCCCCCcCCCCCccEEEEecEEecCC---
Q 011615 194 YLIEVM----FSDNVQISNLTLIDS-PSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGD--- 265 (481)
Q Consensus 194 ~~i~~~----~~~nv~I~g~~i~ns-~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gD--- 265 (481)
..+++. ...+.+|++=.+.+. ....+....+.+.+|++.++... ..||.+..+++.+|+++.|....
T Consensus 216 e~iR~G~h~m~s~~~~VenN~f~~~~gg~aim~skS~~n~i~~N~~~~~-----~ggi~l~~~~~s~I~~N~f~gN~~~~ 290 (506)
T 1dbg_A 216 GGIRIGYYRNDIGRCLVDSNLFMRQDSEAEIITSKSQENVYYGNTYLNC-----QGTMNFRHGDHQVAINNFYIGNDQRF 290 (506)
T ss_dssp CSEEECSSTTCBCCCEEESCEEEEECSSSEEEEEESBSCEEESCEEESC-----SSEEEEEECSSCEEESCEEEECSSSS
T ss_pred ccEEEEEEecccCCcEEECCEEEeccCcEEEEEEecCCEEEECCEEEcc-----cCcEEEeecCccEEECCEEECCcCcc
Confidence 345554 356778887777654 34567777777789999999862 44788888888899999987642
Q ss_pred --ceeeecCCCCccCcccCCceeeEEEEEEEEeCCCC------ceEEeccCc----CCCEEEEEEEeeEEEcCCc-eEEE
Q 011615 266 --DCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPDS------AAIALGSEM----SGGIKDVRAEDITAINTQS-GVRI 332 (481)
Q Consensus 266 --D~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~~------~gisIGs~~----~~~v~nI~v~n~~~~~~~~-Gi~I 332 (481)
-+|.+.. . +.+|+|++|....+ .||.+-... ...+++++|++++|.+... ||.+
T Consensus 291 ~~~Gi~i~~------------~-~~~I~nN~f~~~~g~~~~~~~GI~i~~G~~~~~~~~~~~~~I~~Ntfi~n~~~gI~~ 357 (506)
T 1dbg_A 291 GYGGMFVWG------------S-RHVIACNYFELSETIKSRGNAALYLNPGAMASEHALAFDMLIANNAFINVNGYAIHF 357 (506)
T ss_dssp CBCCEEECS------------B-SCEEESCEEEESSBCGGGTSEEEEECCBCTTSTTCCCBSEEEESCEEESCSSEEEES
T ss_pred CceEEEEEC------------C-CCEEECCEEECCcCccccccccEEEecCCCccccccccCcEEECCEEECCccccEEE
Confidence 4555532 3 44999999998532 277764221 2357899999999999987 9999
Q ss_pred E----------eec-CCCceeecEEEEeeEEccc
Q 011615 333 K----------TAV-GRGAYVKEIYVRRMTMKTM 355 (481)
Q Consensus 333 k----------t~~-g~~g~v~nI~f~ni~~~~~ 355 (481)
. ... .....=.|++|.|..+.+-
T Consensus 358 ~~~~~~~~~~~~g~~~~~~~p~~~~~~nN~i~~~ 391 (506)
T 1dbg_A 358 NPLDERRKEYCAANRLKFETPHQLMLKGNLFFKD 391 (506)
T ss_dssp STTHHHHHHHHHHTTCCCBCCCSEEEESCEEECC
T ss_pred cccccccccccccccccccCCCcEEEEccEEEcC
Confidence 7 111 0113346899998777653
No 76
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=93.94 E-value=0.5 Score=41.92 Aligned_cols=64 Identities=14% Similarity=0.092 Sum_probs=48.1
Q ss_pred eccEEEEeeEEeeCCCCeEEeeccccEEEEeEEEECCCCCCCCCCcCCCCCccEEEEecEEecCCceeee
Q 011615 201 SDNVQISNLTLIDSPSWNVHPVYSSNVLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVSGDDCVAV 270 (481)
Q Consensus 201 ~~nv~I~g~~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gDD~iai 270 (481)
-+..+|+|+.|-.....++|... +.+|+|+.... -..|.+.+.++..++|.+.-....+|=|--
T Consensus 47 e~GaTLkNvIIG~~~~dGIHC~G--~CtleNVwwed----VcEDA~T~k~~g~~~I~GGgA~~A~DKV~Q 110 (197)
T 1ee6_A 47 EAGASLKNVVIGAPAADGVHCYG--DCTITNVIWED----VGEDALTLKSSGTVNISGGAAYKAYDKVFQ 110 (197)
T ss_dssp CTTEEEEEEEECSSCTTCEEEES--CEEEEEEEESS----CCSCSEEEEESEEEEEESCEEEEEEEEEEE
T ss_pred cCCCEEEEEEEcCCCcccEEEcC--ceeEEEEEeee----ccccccEEcCCCeEEEECCCccCCCccEEE
Confidence 35789999999878888999874 58899998876 356778777666777777777766665543
No 77
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=92.73 E-value=2.2 Score=41.33 Aligned_cols=110 Identities=13% Similarity=0.135 Sum_probs=71.3
Q ss_pred eccccEEEEeEEEECCCCC--CCCCCcCCCCCccEEEEecEEecCCceeeecCCCCccCcccCCceeeEEEEEEEEeCCC
Q 011615 222 VYSSNVLIQGLTIRAPIDS--PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPD 299 (481)
Q Consensus 222 ~~~~nv~i~~~~i~~~~~~--~n~DGI~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~ 299 (481)
...++++++|++|.+.... ..+-++.+ .++++.++||.|....|.+....+ + ..+++|++.+..
T Consensus 91 v~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~QDTLy~~~~------------r-~~~~~c~I~G~v 156 (319)
T 1gq8_A 91 AVGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILAYQDSLYVHSN------------R-QFFINCFIAGTV 156 (319)
T ss_dssp ECSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEECSTTCEEECSS------------E-EEEESCEEEESS
T ss_pred EECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECccceeeeecCc------------c-EEEEecEEEeee
Confidence 3588999999999986432 23456666 478899999999987788877653 3 388999998742
Q ss_pred CceEEeccCcCCCEEEEEEEeeEEEcCCc----eEEEEeecCC--CceeecEEEEeeEEcc
Q 011615 300 SAAIALGSEMSGGIKDVRAEDITAINTQS----GVRIKTAVGR--GAYVKEIYVRRMTMKT 354 (481)
Q Consensus 300 ~~gisIGs~~~~~v~nI~v~n~~~~~~~~----Gi~Ikt~~g~--~g~v~nI~f~ni~~~~ 354 (481)
+ +-+|. ....|+||++..... .-.| |.+++ ...-..+.|.|+++..
T Consensus 157 -D-FIfG~------~~a~f~~c~i~~~~~~~~~~~~i-tA~~r~~~~~~~G~vf~~c~i~~ 208 (319)
T 1gq8_A 157 -D-FIFGN------AAVVLQDCDIHARRPGSGQKNMV-TAQGRTDPNQNTGIVIQKSRIGA 208 (319)
T ss_dssp -S-CEEES------CEEEEESCEEEECCCSTTCCEEE-EEECCCSTTCCCEEEEESCEEEE
T ss_pred -e-EEecC------CcEEEEeeEEEEecCCCCCceEE-EeCCCCCCCCCceEEEECCEEec
Confidence 2 22342 137789999875321 1123 22222 1334567888888764
No 78
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=92.66 E-value=1.3 Score=42.92 Aligned_cols=110 Identities=12% Similarity=0.127 Sum_probs=71.9
Q ss_pred eccccEEEEeEEEECCCCC--CCCCCcCCCCCccEEEEecEEecCCceeeecCCCCccCcccCCceeeEEEEEEEEeCCC
Q 011615 222 VYSSNVLIQGLTIRAPIDS--PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLICISPD 299 (481)
Q Consensus 222 ~~~~nv~i~~~~i~~~~~~--~n~DGI~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~~~~~~ 299 (481)
...++++++|++|.+.... ..+-++.+ .++++.++||.|....|.+....+ ++ .+++|++.+..
T Consensus 87 v~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~QDTLy~~~~------------r~-~~~~c~I~G~v 152 (317)
T 1xg2_A 87 AVGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDAYQDTLYAHSQ------------RQ-FYRDSYVTGTV 152 (317)
T ss_dssp ECSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEECSTTCEEECSS------------EE-EEESCEEEESS
T ss_pred EECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCccccceeecCc------------cE-EEEeeEEEece
Confidence 3688999999999986432 23456666 478899999999988788877653 33 88999998742
Q ss_pred CceEEeccCcCCCEEEEEEEeeEEEcCCc----eEEEEeecCC--CceeecEEEEeeEEcc
Q 011615 300 SAAIALGSEMSGGIKDVRAEDITAINTQS----GVRIKTAVGR--GAYVKEIYVRRMTMKT 354 (481)
Q Consensus 300 ~~gisIGs~~~~~v~nI~v~n~~~~~~~~----Gi~Ikt~~g~--~g~v~nI~f~ni~~~~ 354 (481)
-+-+|. ....|+||++..... .-.| |.+++ ...-..+.|.|+++..
T Consensus 153 --DFIfG~------~~avf~~c~i~~~~~~~~~~~~i-tA~~r~~~~~~~G~vf~~c~i~~ 204 (317)
T 1xg2_A 153 --DFIFGN------AAVVFQKCQLVARKPGKYQQNMV-TAQGRTDPNQATGTSIQFCNIIA 204 (317)
T ss_dssp --SCEEEC------CEEEEESCEEEECCCSTTCCEEE-EEECCCCTTSCCEEEEESCEEEE
T ss_pred --eEEcCC------ceEEEeeeEEEEeccCCCCccEE-EecCcCCCCCCcEEEEECCEEec
Confidence 222342 137789999875321 1123 22222 1334567788888764
No 79
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=91.86 E-value=4.8 Score=38.75 Aligned_cols=38 Identities=16% Similarity=0.266 Sum_probs=25.8
Q ss_pred eeecEEEEeeEEccce-eeEEEEcccCCCCCCCCCCCCCCeEEeEEEEE
Q 011615 341 YVKEIYVRRMTMKTMK-YVFWMTGDYGSHPDPGFDPKALPTVTGINYRD 388 (481)
Q Consensus 341 ~v~nI~f~ni~~~~~~-~~i~i~~~y~~~~~~~~~~~~~~~i~nItf~n 388 (481)
.=|+|+++|+.+.+.. ..+-|+.+|++. ..|+|+++++
T Consensus 262 ~~R~v~i~nv~~~g~~~~lvGiN~NyGDt----------ati~n~~i~~ 300 (344)
T 3b4n_A 262 GPRFLTVTSATVNGTIDSIAGVNRNYGDV----------ATISGLKIKN 300 (344)
T ss_dssp CCEEEEESSEEEEEEEEEEEEEEGGGTCE----------EEECSEEETT
T ss_pred cceEEEEeceEEeCCceEEEEEeCCCCCE----------EEEEEEEEec
Confidence 4578888888875543 345577887742 4788888876
No 80
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=91.76 E-value=4.8 Score=39.70 Aligned_cols=157 Identities=12% Similarity=0.071 Sum_probs=81.4
Q ss_pred CCCCeeEEEEeeccEEEEeeEEeeCCCCeEEeeccccEEEEe----------EEEECCCCCCCCCC-------cCCCCCc
Q 011615 190 VTRPYLIEVMFSDNVQISNLTLIDSPSWNVHPVYSSNVLIQG----------LTIRAPIDSPNTDG-------INPDSCT 252 (481)
Q Consensus 190 ~~rp~~i~~~~~~nv~I~g~~i~ns~~~~i~~~~~~nv~i~~----------~~i~~~~~~~n~DG-------I~~~~s~ 252 (481)
+.....+.+..|.+|.|++-.-. +-+..+..|+.|..++ +++.+-......-| ++..+++
T Consensus 142 Q~~~stL~I~~~~gv~v~~~~~~---m~~ylf~~c~~i~~~~p~~f~g~~~~ItFen~~s~~wg~GNyvIGG~~~YGS~S 218 (543)
T 3riq_A 142 QVAGATLRVNSANNIIFTHPEAT---MGGYLFTLCNHILVESPRNFIAWESGITFENHHTTAWGTGNKVVGGEIKYGSGS 218 (543)
T ss_dssp CCCCEEEEEESCEEEEEESCEEE---EEEEEEESCEEEEEECCCSEEEEEEEEEEECTTSSSCBCSCEEESCEEEECSSC
T ss_pred ccceeEEEEeccCceEEecCccc---hhhhhhhhhcccccCCCcccccccceEEEeccccCcccccceEecceeeccccc
Confidence 44556788899988877654321 1233445666665443 55555311111111 2334455
Q ss_pred cEEEEecEEecCCceeeec--C------C----CCccCcccCCceeeEEEEEEEEeCCCCceEEeccCcCC---------
Q 011615 253 NTRIEDNYIVSGDDCVAVK--S------G----WDEYGIKVGMPTQHLIIRRLICISPDSAAIALGSEMSG--------- 311 (481)
Q Consensus 253 nV~I~n~~i~~gDD~iai~--s------g----~~~~g~~~~~~s~nI~I~n~~~~~~~~~gisIGs~~~~--------- 311 (481)
.|.+-...-..+.|+=.+. + | .++-|-...+ +.|..++|........+|+-+|+.+..
T Consensus 219 ~v~FlRNdGG~~hdGGVig~tsyR~GESGvKT~Q~~Vgg~ssR-nYnLqF~d~~~i~~~~DG~Dl~aD~g~pe~R~~D~~ 297 (543)
T 3riq_A 219 AVLFIRNDGGDDHDGGVRDLISYRVGESGVKTYQNEIGGRSAR-NYRLVFDNITTIQCYYDGIDVNADTGSPTERVDDYT 297 (543)
T ss_dssp SEEEESBBCTTTTCCEEEEEEEESCSSCSSEECCSEETTEECC-CBSCEEEEEEEESCSSCSCEECSCCSSCCCCSSSCC
T ss_pred eEEEEEcCCCcCCCCCeEeeeeeccCCCcceeeecccCccccc-eeeEEEeccceEEEeecceeccCCCCCCccCCCCcc
Confidence 5554433322233332221 1 1 1111222222 678999999888877899999883210
Q ss_pred --------CEEEEEEEeeEEEcCCceEEEEeecCCCceeecEEEEeeEE
Q 011615 312 --------GIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTM 352 (481)
Q Consensus 312 --------~v~nI~v~n~~~~~~~~Gi~Ikt~~g~~g~v~nI~f~ni~~ 352 (481)
--.|=.|+|+...++ .|+.+. |+|.+++|+||+.+++.-
T Consensus 298 laqYp~~qLP~nHii~Ni~~~~~-lGVG~~-~DG~~~~v~ni~~~dcag 344 (543)
T 3riq_A 298 LAEYPWFQLPTQHIIRNIITRDC-MGIGAW-WDGQKNIIDNVVTYEAHK 344 (543)
T ss_dssp TTTSCTTCCCCCCEEEEEEEESC-SSCSSE-ECSSSCEEEEEEEESCSS
T ss_pred hhhCchhhCchhhhhhhhheecc-ceeeee-ecCCCCeEeeEEeecccc
Confidence 012334555555554 233332 367789999998776553
No 81
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=87.87 E-value=8.8 Score=37.50 Aligned_cols=110 Identities=11% Similarity=0.058 Sum_probs=71.7
Q ss_pred ccccEEEEeEEEECCCC----------------CCCCCCc--CCCCCccEEEEecEEecCCceeeecCCCCccCcccCCc
Q 011615 223 YSSNVLIQGLTIRAPID----------------SPNTDGI--NPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMP 284 (481)
Q Consensus 223 ~~~nv~i~~~~i~~~~~----------------~~n~DGI--~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~ 284 (481)
.+++++++|++|.+... ...+-++ .+ .++++.+++|.|....|.+....
T Consensus 94 ~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v-~~d~~~f~~c~f~G~QDTLy~~~------------ 160 (342)
T 2nsp_A 94 SAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTK-SGDRAYFKDVSLVGYQATLYVSG------------ 160 (342)
T ss_dssp CSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECT-TCBSEEEEEEEEECSTTCEEECS------------
T ss_pred ECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEee-ccCcEEEEeeEEecccceEEECC------------
Confidence 57899999999998641 1223455 44 47889999999999878887764
Q ss_pred eeeEEEEEEEEeCCCCceEEeccCcCCCEEEEEEEeeEEEcCCc---e-----EEEEeecCC-CceeecEEEEeeEEccc
Q 011615 285 TQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQS---G-----VRIKTAVGR-GAYVKEIYVRRMTMKTM 355 (481)
Q Consensus 285 s~nI~I~n~~~~~~~~~gisIGs~~~~~v~nI~v~n~~~~~~~~---G-----i~Ikt~~g~-~g~v~nI~f~ni~~~~~ 355 (481)
....++||++.+. --+=+|.. ...++||++.-... + -.|- .++. ...-..+.|.|+++...
T Consensus 161 -gr~~~~~c~I~G~--vDFIFG~a------~a~f~~c~i~~~~~~~~~~~~~~g~It-A~~~~~~~~~G~vf~~c~i~~~ 230 (342)
T 2nsp_A 161 -GRSFFSDCRISGT--VDFIFGDG------TALFNNCDLVSRYRADVKSGNVSGYLT-APSTNINQKYGLVITNSRVIRE 230 (342)
T ss_dssp -SEEEEESCEEEES--EEEEEESS------EEEEESCEEEECCCTTSCTTSCCEEEE-EECCBTTCSCCEEEESCEEEES
T ss_pred -CCEEEEcCEEEec--eEEEeCCc------eEEEecCEEEEecCcccccccCceEEE-ccCCCCCCCCEEEEEcCEEecC
Confidence 3578899999973 23444531 47889999975321 1 2332 2211 12223578888888653
No 82
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=87.03 E-value=8.7 Score=37.85 Aligned_cols=113 Identities=12% Similarity=0.059 Sum_probs=73.4
Q ss_pred eccccEEEEeEEEECCCC----------------CCCCCCcCCC-CCccEEEEecEEecCCceeeecCCCCccCcccCCc
Q 011615 222 VYSSNVLIQGLTIRAPID----------------SPNTDGINPD-SCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMP 284 (481)
Q Consensus 222 ~~~~nv~i~~~~i~~~~~----------------~~n~DGI~~~-~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~ 284 (481)
...++++++|++|.+... ...+-++.+. .++++.+++|.|....|.+....
T Consensus 119 V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~QDTLy~~~------------ 186 (364)
T 3uw0_A 119 VNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGYQDTLYSKT------------ 186 (364)
T ss_dssp ECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECSBSCEEECT------------
T ss_pred EECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEecccceEeCC------------
Confidence 357899999999998642 1223455554 47889999999999878887762
Q ss_pred eeeEEEEEEEEeCCCCceEEeccCcCCCEEEEEEEeeEEEcCC------ceEEEEeecCCCceeecEEEEeeEEcc
Q 011615 285 TQHLIIRRLICISPDSAAIALGSEMSGGIKDVRAEDITAINTQ------SGVRIKTAVGRGAYVKEIYVRRMTMKT 354 (481)
Q Consensus 285 s~nI~I~n~~~~~~~~~gisIGs~~~~~v~nI~v~n~~~~~~~------~Gi~Ikt~~g~~g~v~nI~f~ni~~~~ 354 (481)
.....+++|++.+. --+=+|.. ...++||++.... .+-.|-........-..+.|.|+++..
T Consensus 187 ~gr~yf~~c~I~Gt--vDFIFG~a------~a~f~~c~i~~~~~~~~~~~~g~ITA~~~~~~~~~G~vf~~c~i~~ 254 (364)
T 3uw0_A 187 GSRSYFSDCEISGH--VDFIFGSG------ITVFDNCNIVARDRSDIEPPYGYITAPSTLTTSPYGLIFINSRLTK 254 (364)
T ss_dssp TCEEEEESCEEEES--EEEEEESS------EEEEESCEEEECCCSSCSSCCEEEEEECCCTTCSCCEEEESCEEEE
T ss_pred CCCEEEEcCEEEcC--CCEECCcc------eEEEEeeEEEEeccCcccCCccEEEeCCcCCCCCcEEEEEeeEEec
Confidence 24678899999973 34445531 5778999997531 122332221111223457899988875
No 83
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=86.22 E-value=9 Score=36.86 Aligned_cols=41 Identities=22% Similarity=0.188 Sum_probs=27.6
Q ss_pred EEEEeEEEECCCCCCCCCCcCCCCCccEEEEecEEec-CCceeeecC
Q 011615 227 VLIQGLTIRAPIDSPNTDGINPDSCTNTRIEDNYIVS-GDDCVAVKS 272 (481)
Q Consensus 227 v~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~-gDD~iai~s 272 (481)
.+++|+.|-. ...||||... .+-+|+|+.+.. +.|++.+++
T Consensus 160 atlkNvIiG~----~~~dGIHC~~-G~CtleNVwwedVcEDA~T~kg 201 (344)
T 3b4n_A 160 TVKNLRISAS----GGADGIHCDS-GNCTIENVIWEDICEDAATNNG 201 (344)
T ss_dssp EEEEEEECTT----CCTTCEEEEE-SEEEEEEEEESSCSSCSEEECS
T ss_pred cEEEEEEecC----CCccceEEcc-CCeeEEEEeehhcccccceecC
Confidence 4566665532 4678888751 247788888765 788888874
No 84
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=83.33 E-value=0.31 Score=48.33 Aligned_cols=23 Identities=30% Similarity=0.455 Sum_probs=20.8
Q ss_pred cCccCCCccchHHHHHHHHHHhh
Q 011615 62 FGGVGDGKTSNTKAFNTAISNLS 84 (481)
Q Consensus 62 yGA~gDG~tDdt~Aiq~Ai~~a~ 84 (481)
=||+|||++|||+|+.+|+.++.
T Consensus 4 ~~a~gdgvtddt~a~~~~l~~~~ 26 (670)
T 3ju4_A 4 GSAKGDGVTDDTAALTSALNDTP 26 (670)
T ss_dssp CCCCCEEEEECHHHHHHHHHHSC
T ss_pred CcccCCCccCcHHHHHHHhccCC
Confidence 47999999999999999999863
No 85
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=76.44 E-value=11 Score=36.34 Aligned_cols=65 Identities=23% Similarity=0.324 Sum_probs=45.6
Q ss_pred eeeEEEEEEEEeCCCCceEEeccCcC--------C-----------CEEEEEEEeeEEEcCCceEEEEeecCCCceeecE
Q 011615 285 TQHLIIRRLICISPDSAAIALGSEMS--------G-----------GIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEI 345 (481)
Q Consensus 285 s~nI~I~n~~~~~~~~~gisIGs~~~--------~-----------~v~nI~v~n~~~~~~~~Gi~Ikt~~g~~g~v~nI 345 (481)
..|..+++.......++|+.+|+... + --.|=.|+|..+.+. -|+.+.. +|.+++|+||
T Consensus 269 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gs-LGVG~GM-DG~G~YVSNi 346 (559)
T 2vfm_A 269 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGA-LGVGFGM-DGKGMYVSNI 346 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEEECCSCSSSCCSCCTTSCCTTTSCTTCCCCCCEEEEEEEECC-SSEEEEE-EEESCEEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeee-cCCCceEeee
Confidence 57999999998888889999998521 0 023556677766665 3444443 3557899999
Q ss_pred EEEeeE
Q 011615 346 YVRRMT 351 (481)
Q Consensus 346 ~f~ni~ 351 (481)
+++++.
T Consensus 347 tv~DCA 352 (559)
T 2vfm_A 347 TVEDCA 352 (559)
T ss_dssp EEESCS
T ss_pred Eehhcc
Confidence 988865
No 86
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=72.52 E-value=10 Score=36.57 Aligned_cols=65 Identities=26% Similarity=0.412 Sum_probs=45.6
Q ss_pred eeeEEEEEEEEeCCCCceEEeccCcC--------C-----------CEEEEEEEeeEEEcCCceEEEEeecCCCceeecE
Q 011615 285 TQHLIIRRLICISPDSAAIALGSEMS--------G-----------GIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEI 345 (481)
Q Consensus 285 s~nI~I~n~~~~~~~~~gisIGs~~~--------~-----------~v~nI~v~n~~~~~~~~Gi~Ikt~~g~~g~v~nI 345 (481)
..|..+++.......++|+.+|+... + --.|=.|+|..+.+. -|+.+.. +|.+++|+||
T Consensus 272 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gs-LGVG~GM-DG~G~YVSNi 349 (559)
T 2v5i_A 272 NYNLQFRDSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNS-LGVGLGM-DGSGGYVSNV 349 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEECCSSCTTCCSSSCTTSCCTTTSCTTCCCCCCEEEEEEEESC-SSEEEEE-EEESCEEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeee-cCCCceEeee
Confidence 57899999998888889999998521 0 023556677776666 3444443 3557899999
Q ss_pred EEEeeE
Q 011615 346 YVRRMT 351 (481)
Q Consensus 346 ~f~ni~ 351 (481)
+++++.
T Consensus 350 tv~DCA 355 (559)
T 2v5i_A 350 TVQDCA 355 (559)
T ss_dssp EEESCS
T ss_pred Eehhcc
Confidence 888865
No 87
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=67.04 E-value=38 Score=32.73 Aligned_cols=94 Identities=13% Similarity=0.209 Sum_probs=53.6
Q ss_pred eeeEEEEEEEEeCCCCceEEeccCc-CCCEEEEEEEeeEEEcCCceEEEEeecCCCceeecEEEEeeEEccce------e
Q 011615 285 TQHLIIRRLICISPDSAAIALGSEM-SGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK------Y 357 (481)
Q Consensus 285 s~nI~I~n~~~~~~~~~gisIGs~~-~~~v~nI~v~n~~~~~~~~Gi~Ikt~~g~~g~v~nI~f~ni~~~~~~------~ 357 (481)
-.|-.|.|..+.++ -|+.+|... .+.|+||++++|- ..|..+-+. +-+|.||++.++. +
T Consensus 319 P~NHliDnllv~gs--LGVG~GMDG~G~YVSNitv~DCA----GsG~~~~t~--------~~~FtNi~vID~N~~nF~ad 384 (559)
T 2v5i_A 319 PNNHLVDNILVMNS--LGVGLGMDGSGGYVSNVTVQDCA----GAGMLAHTY--------NRVFSNITVIDCNYLNFDSD 384 (559)
T ss_dssp CCCCEEEEEEEESC--SSEEEEEEEESCEEEEEEEESCS----SEEEEEEEE--------SCEEEEEEEESCCTTCCSSC
T ss_pred cchhhhhhheeecc--cceeeeecCCCceEeeeEehhcc----CcceEEeec--------cceeeeeEEEecccccCCcc
Confidence 35778899999884 466666543 3468888888874 245565553 3566666665432 3
Q ss_pred eEEEEcccC--C-C-CCCCCCCCCCCe--EEeEEEEEEEEE
Q 011615 358 VFWMTGDYG--S-H-PDPGFDPKALPT--VTGINYRDMVAD 392 (481)
Q Consensus 358 ~i~i~~~y~--~-~-~~~~~~~~~~~~--i~nItf~nI~~~ 392 (481)
-|+|.+..- . + ..-..+|+.+.. -.|-|++.|++.
T Consensus 385 Qi~I~G~C~VNGlR~~GIk~~~~~Gl~i~APnsTiSGi~G~ 425 (559)
T 2v5i_A 385 QIIIIGDCIVNGIRAAGIKPQPSNGLVISAPNSTISGLVGN 425 (559)
T ss_dssp SEEECSSCEEEEEECCCSSCCCSSSCSEEEEEEEEEEEESS
T ss_pred eEEEEcceEEcceEEeeeccCCCCceEEeCCCCcccceecc
Confidence 455544310 0 0 000112333333 357888888874
No 88
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=66.27 E-value=39 Score=32.69 Aligned_cols=94 Identities=12% Similarity=0.140 Sum_probs=53.1
Q ss_pred eeeEEEEEEEEeCCCCceEEeccCc-CCCEEEEEEEeeEEEcCCceEEEEeecCCCceeecEEEEeeEEccce------e
Q 011615 285 TQHLIIRRLICISPDSAAIALGSEM-SGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK------Y 357 (481)
Q Consensus 285 s~nI~I~n~~~~~~~~~gisIGs~~-~~~v~nI~v~n~~~~~~~~Gi~Ikt~~g~~g~v~nI~f~ni~~~~~~------~ 357 (481)
-.|-.|.|..+.++ -|+.+|... .+.|+||++++|- ..|..+-+. +-+|.||++.++. +
T Consensus 316 P~NHliDnllv~gs--LGVG~GMDG~G~YVSNitv~DCA----GsG~~~~t~--------~~~FtNi~vID~N~~nF~ad 381 (559)
T 2vfm_A 316 PLNHLIDNLLVRGA--LGVGFGMDGKGMYVSNITVEDCA----GSGAYLLTH--------ESVFTNIAIIDTNTKDFQAN 381 (559)
T ss_dssp CCCCEEEEEEEECC--SSEEEEEEEESCEEEEEEEESCS----SEEEEEEEE--------SCEEEEEEEESCCTTCCSSC
T ss_pred cchhhhhhheeecc--cceeeeecCCCceEeeeEehhcc----CcceEEeec--------cceeeeeEEEecccccCCcc
Confidence 35778899988884 466666543 3468888888874 245565553 3566666665432 3
Q ss_pred eEEEEcccC-C--C-CCCCCCCCCCCe--EEeEEEEEEEEE
Q 011615 358 VFWMTGDYG-S--H-PDPGFDPKALPT--VTGINYRDMVAD 392 (481)
Q Consensus 358 ~i~i~~~y~-~--~-~~~~~~~~~~~~--i~nItf~nI~~~ 392 (481)
-|+|.+..- . + ..-..+++.... -.|-|++.|++.
T Consensus 382 Qi~I~G~C~VNGlR~~GIk~~~~~gl~i~APnsTiSGi~G~ 422 (559)
T 2vfm_A 382 QIYISGACRVNGLRLIGIRSTDGQSLTIDAPNSTVSGITGM 422 (559)
T ss_dssp SEEECSSCEEEEEEECCSCCCCSSCCSEEEEEEEEEEEESC
T ss_pred eEEEEcceEEcceEEeeeccCCCCceEEeCCCCcccceecc
Confidence 455543310 0 0 000112333333 357888888875
No 89
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=66.17 E-value=77 Score=31.63 Aligned_cols=124 Identities=9% Similarity=0.047 Sum_probs=72.5
Q ss_pred eeccccEEEEeEEEECCCCC------CCCCCcCCCCCccEEEEecEEecCCceeeecCCCCccCcccCCceeeEEEEEEE
Q 011615 221 PVYSSNVLIQGLTIRAPIDS------PNTDGINPDSCTNTRIEDNYIVSGDDCVAVKSGWDEYGIKVGMPTQHLIIRRLI 294 (481)
Q Consensus 221 ~~~~~nv~i~~~~i~~~~~~------~n~DGI~~~~s~nV~I~n~~i~~gDD~iai~sg~~~~g~~~~~~s~nI~I~n~~ 294 (481)
....+++.++|++|.+.... ..+-.+.+ .+.++.+.+|.|....|-+.......+.+.. ..-...-.+++|+
T Consensus 197 ~V~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~v-~gDr~~fy~C~f~G~QDTLy~~~~~~~~~~~-~d~~gRqyy~~Cy 274 (422)
T 3grh_A 197 WSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRT-DGDQVQINNVNILGRQNTFFVTNSGVQNRLE-TNRQPRTLVTNSY 274 (422)
T ss_dssp EECCTTCEEEEEEEEETTGGGSCSSCCCCCSEEE-CCSSEEEEEEEEECSTTCEEECCCCTTCSCC-SSCCCEEEEESCE
T ss_pred EEECCCEEEEeeEEEeCCCCCCCCCCCceEEEEe-cCCcEEEEeeEEEeecceeeecccccccccc-ccccccEEEEecE
Confidence 34578899999999986421 12233443 4688999999999987877764310000000 0014567889999
Q ss_pred EeCCCCceEEeccCcCCCEEEEEEEeeEEEcCCc----eEEEEeecCCCceeecEEEEeeEEcc
Q 011615 295 CISPDSAAIALGSEMSGGIKDVRAEDITAINTQS----GVRIKTAVGRGAYVKEIYVRRMTMKT 354 (481)
Q Consensus 295 ~~~~~~~gisIGs~~~~~v~nI~v~n~~~~~~~~----Gi~Ikt~~g~~g~v~nI~f~ni~~~~ 354 (481)
+.+. -=+=+|.. ...|++|++.-... +-.|-........-..+.|.|+++..
T Consensus 275 IeGt--VDFIFG~a------~AvFe~C~I~s~~~~~~~~g~ITA~~t~~~~~~Gfvf~nC~ita 330 (422)
T 3grh_A 275 IEGD--VDIVSGRG------AVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFNA 330 (422)
T ss_dssp EEES--EEEEEESS------EEEEESCEEEECCSSCSSCCEEEEECCBTTCCCCEEEESCEEEE
T ss_pred Eecc--ccEEccCc------eEEEEeeEEEEecCCCCCceEEEecCCCCCCCCEEEEECCEEEe
Confidence 9973 33444521 57789999875321 22232211112233467888888874
No 90
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=65.53 E-value=22 Score=35.85 Aligned_cols=65 Identities=23% Similarity=0.324 Sum_probs=45.4
Q ss_pred eeeEEEEEEEEeCCCCceEEeccCcC--------C-----------CEEEEEEEeeEEEcCCceEEEEeecCCCceeecE
Q 011615 285 TQHLIIRRLICISPDSAAIALGSEMS--------G-----------GIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEI 345 (481)
Q Consensus 285 s~nI~I~n~~~~~~~~~gisIGs~~~--------~-----------~v~nI~v~n~~~~~~~~Gi~Ikt~~g~~g~v~nI 345 (481)
..|..+++.......++|+.+|+... + --.|=.|+|..+.+. -|+.+.. +|.+++|+||
T Consensus 376 nynlqfrds~~~~pvwdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~~s-lgvg~gm-dg~g~yvsni 453 (666)
T 2xc1_A 376 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGA-LGVGFGM-DGKGMYVSNI 453 (666)
T ss_dssp CBSCEEEEEEEECCSSCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEESC-SSEEEEE-EEESCEEEEE
T ss_pred ccceeeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeee-cCCCceEeee
Confidence 57899999988887889999998521 0 023556677766665 3444443 3557899999
Q ss_pred EEEeeE
Q 011615 346 YVRRMT 351 (481)
Q Consensus 346 ~f~ni~ 351 (481)
+++++.
T Consensus 454 tv~dca 459 (666)
T 2xc1_A 454 TVEDCA 459 (666)
T ss_dssp EEESCS
T ss_pred Eehhcc
Confidence 988865
No 91
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=65.21 E-value=48 Score=32.74 Aligned_cols=54 Identities=19% Similarity=0.159 Sum_probs=32.8
Q ss_pred eeEEEEEEEEeCCCCceEEeccCc-CCCEEEEEEEeeEEEcCCceEEEEeecCCCceeecEEEE
Q 011615 286 QHLIIRRLICISPDSAAIALGSEM-SGGIKDVRAEDITAINTQSGVRIKTAVGRGAYVKEIYVR 348 (481)
Q Consensus 286 ~nI~I~n~~~~~~~~~gisIGs~~-~~~v~nI~v~n~~~~~~~~Gi~Ikt~~g~~g~v~nI~f~ 348 (481)
.|-.|+|+.... ..|+.+|... .+.++||++++|. ..|+.+++. +-.++||++-
T Consensus 308 ~nHii~Ni~~~~--~lGVG~~~DG~~~~v~ni~~~dca----g~G~~~~~~---~~~ftNitvI 362 (543)
T 3riq_A 308 TQHIIRNIITRD--CMGIGAWWDGQKNIIDNVVTYEAH----KEGMFDRGT---NNDITNITVV 362 (543)
T ss_dssp CCCEEEEEEEES--CSSCSSEECSSSCEEEEEEEESCS----SCSEEECSS---SCEEEEEEEE
T ss_pred hhhhhhhhheec--cceeeeeecCCCCeEeeEEeeccc----cCcceeecc---CcceeeEEEE
Confidence 456788988887 4566666544 3457788777764 356666543 2334444443
No 92
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=58.36 E-value=57 Score=32.89 Aligned_cols=128 Identities=13% Similarity=0.117 Sum_probs=67.3
Q ss_pred CccEEEEecEEec-CCceeeecCCCC--cc----C--c----ccCCceeeEEEEEEEEeCCCCceEEeccCc-CCCEEEE
Q 011615 251 CTNTRIEDNYIVS-GDDCVAVKSGWD--EY----G--I----KVGMPTQHLIIRRLICISPDSAAIALGSEM-SGGIKDV 316 (481)
Q Consensus 251 s~nV~I~n~~i~~-gDD~iai~sg~~--~~----g--~----~~~~~s~nI~I~n~~~~~~~~~gisIGs~~-~~~v~nI 316 (481)
+-|..++++.... -.|++.+++..+ .. | . ...+--.|-.|.|..+.++ -|+.+|... .+.|+||
T Consensus 376 nynlqfrds~~~~pvwdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~~s--lgvg~gmdg~g~yvsni 453 (666)
T 2xc1_A 376 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGA--LGVGFGMDGKGMYVSNI 453 (666)
T ss_dssp CBSCEEEEEEEECCSSCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEESC--SSEEEEEEEESCEEEEE
T ss_pred ccceeeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc--cceeeeecCCCceEeee
Confidence 4566777666443 456666655311 00 0 0 0111235778999999884 466666543 3468888
Q ss_pred EEEeeEEEcCCceEEEEeecCCCceeecEEEEeeEEccce------eeEEEEcccC-C--C-CCCCCCCCCCCe--EEeE
Q 011615 317 RAEDITAINTQSGVRIKTAVGRGAYVKEIYVRRMTMKTMK------YVFWMTGDYG-S--H-PDPGFDPKALPT--VTGI 384 (481)
Q Consensus 317 ~v~n~~~~~~~~Gi~Ikt~~g~~g~v~nI~f~ni~~~~~~------~~i~i~~~y~-~--~-~~~~~~~~~~~~--i~nI 384 (481)
++++|- ..|..+-+. +-+|.||++.++. +-|+|.+..- . + ..-..+++.... -.|-
T Consensus 454 tv~dca----g~g~~~~~~--------~~~ftni~vid~n~~~f~~~qi~i~g~c~vng~r~~gi~~~~~~g~~i~apns 521 (666)
T 2xc1_A 454 TVEDCA----GSGAYLLTH--------ESVFTNIAIIDTNTKDFQANQIYISGACRVNGLRLIGIRSTDGQSLTIDAPNS 521 (666)
T ss_dssp EEESCS----SEEEEEEEE--------SCEEEEEEEESCCTTCCSSCSEEECSSCEEEEEEECCSSCCTTCSCSEEEEEE
T ss_pred Eehhcc----CcceEEeec--------cceeeeeEEEecccccCCcceEEEEcceEEcceEEeeeccCCCCceEEeCCCC
Confidence 888874 245565553 3466666665432 3455543210 0 0 000112333333 3577
Q ss_pred EEEEEEEE
Q 011615 385 NYRDMVAD 392 (481)
Q Consensus 385 tf~nI~~~ 392 (481)
|++.|++.
T Consensus 522 t~sgi~g~ 529 (666)
T 2xc1_A 522 TVSGITGM 529 (666)
T ss_dssp EEEEEESC
T ss_pred cccceecc
Confidence 88888774
Done!