Query 011618
Match_columns 481
No_of_seqs 173 out of 1325
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 11:52:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011618.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011618hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gq2_A Malic enzyme; oxidoredu 100.0 3E-167 1E-171 1321.0 30.2 421 31-475 2-423 (555)
2 1pj3_A NAD-dependent malic enz 100.0 1E-166 4E-171 1319.9 29.9 424 30-475 3-428 (564)
3 1o0s_A NAD-ME, NAD-dependent m 100.0 2E-166 6E-171 1322.3 28.9 429 23-475 30-461 (605)
4 3nv9_A Malic enzyme; rossmann 100.0 6.8E-96 2E-100 764.3 26.0 297 106-474 44-350 (487)
5 2a9f_A Putative malic enzyme ( 100.0 1.4E-89 4.7E-94 707.9 17.9 290 106-475 19-313 (398)
6 1vl6_A Malate oxidoreductase; 100.0 1.6E-85 5.5E-90 676.3 19.8 292 104-475 21-318 (388)
7 2dvm_A Malic enzyme, 439AA lon 100.0 1.1E-61 3.9E-66 506.5 20.1 286 112-474 22-319 (439)
8 3gvp_A Adenosylhomocysteinase 98.8 3.8E-08 1.3E-12 103.1 12.2 169 243-459 112-318 (435)
9 3h9u_A Adenosylhomocysteinase; 98.7 1.7E-08 5.9E-13 105.8 9.3 129 289-461 173-311 (436)
10 1x13_A NAD(P) transhydrogenase 98.7 3.3E-08 1.1E-12 101.8 8.1 231 155-451 25-300 (401)
11 3ond_A Adenosylhomocysteinase; 98.1 9.7E-06 3.3E-10 86.2 10.3 132 288-463 226-367 (488)
12 3n58_A Adenosylhomocysteinase; 97.8 0.0001 3.6E-09 77.8 11.0 120 289-448 209-338 (464)
13 1l7d_A Nicotinamide nucleotide 97.6 0.00074 2.5E-08 68.5 14.2 243 155-451 18-302 (384)
14 4dio_A NAD(P) transhydrogenase 97.2 9.3E-05 3.2E-09 77.0 1.5 110 323-451 190-320 (405)
15 3p2y_A Alanine dehydrogenase/p 96.8 0.00072 2.5E-08 69.9 3.8 110 323-451 184-310 (381)
16 3d4o_A Dipicolinate synthase s 96.7 0.022 7.6E-07 55.3 13.7 135 278-447 106-248 (293)
17 1a4i_A Methylenetetrahydrofola 96.2 0.0069 2.4E-07 60.9 6.7 141 253-446 79-239 (301)
18 3k92_A NAD-GDH, NAD-specific g 96.2 0.068 2.3E-06 56.0 14.4 183 242-446 125-327 (424)
19 4fcc_A Glutamate dehydrogenase 96.1 0.36 1.2E-05 51.0 19.4 183 241-445 139-351 (450)
20 3l07_A Bifunctional protein fo 96.0 0.012 4.1E-07 58.7 7.3 107 300-461 141-252 (285)
21 3p2o_A Bifunctional protein fo 96.0 0.012 4.3E-07 58.6 7.3 154 253-461 77-252 (285)
22 3r3j_A Glutamate dehydrogenase 95.9 0.32 1.1E-05 51.4 17.9 192 243-461 145-368 (456)
23 4a5o_A Bifunctional protein fo 95.8 0.015 5.3E-07 58.0 7.0 106 301-461 142-253 (286)
24 3aoe_E Glutamate dehydrogenase 95.7 0.19 6.5E-06 52.5 15.2 178 243-445 123-320 (419)
25 3ngx_A Bifunctional protein fo 95.6 0.016 5.6E-07 57.5 6.6 152 253-461 70-241 (276)
26 3aog_A Glutamate dehydrogenase 95.5 0.16 5.5E-06 53.4 14.0 192 243-461 140-353 (440)
27 1b0a_A Protein (fold bifunctio 95.5 0.016 5.6E-07 57.8 6.1 154 253-461 77-251 (288)
28 1v8b_A Adenosylhomocysteinase; 95.4 0.077 2.6E-06 56.3 11.3 124 294-461 234-357 (479)
29 4a26_A Putative C-1-tetrahydro 95.3 0.022 7.5E-07 57.2 6.5 139 253-444 81-239 (300)
30 1edz_A 5,10-methylenetetrahydr 95.1 0.018 6.2E-07 58.1 5.2 114 303-447 151-278 (320)
31 2yfq_A Padgh, NAD-GDH, NAD-spe 95.1 0.24 8.1E-06 51.8 13.5 193 243-461 116-335 (421)
32 1gpj_A Glutamyl-tRNA reductase 95.0 0.17 5.7E-06 51.7 11.8 139 277-448 129-270 (404)
33 3don_A Shikimate dehydrogenase 94.6 0.023 7.9E-07 55.9 4.1 111 305-448 102-215 (277)
34 2bma_A Glutamate dehydrogenase 94.5 0.61 2.1E-05 49.5 15.0 179 244-446 159-370 (470)
35 1pjc_A Protein (L-alanine dehy 94.4 0.029 9.9E-07 56.4 4.5 101 320-446 164-269 (361)
36 2c2x_A Methylenetetrahydrofola 94.4 0.046 1.6E-06 54.5 5.8 143 253-447 76-235 (281)
37 3d64_A Adenosylhomocysteinase; 94.4 0.11 3.7E-06 55.4 9.0 111 298-448 258-368 (494)
38 3ce6_A Adenosylhomocysteinase; 94.2 0.23 7.9E-06 52.8 11.1 109 312-461 266-374 (494)
39 1pzg_A LDH, lactate dehydrogen 93.5 0.062 2.1E-06 53.6 4.8 107 324-448 10-136 (331)
40 1c1d_A L-phenylalanine dehydro 93.5 2.3 7.8E-05 43.4 16.4 164 243-445 90-262 (355)
41 2tmg_A Protein (glutamate dehy 93.5 1.1 3.9E-05 46.6 14.4 182 244-446 115-317 (415)
42 3fbt_A Chorismate mutase and s 93.4 0.083 2.8E-06 52.1 5.4 49 305-367 107-155 (282)
43 3jyo_A Quinate/shikimate dehyd 93.3 0.095 3.2E-06 51.4 5.8 142 252-418 51-204 (283)
44 3u95_A Glycoside hydrolase, fa 93.3 0.053 1.8E-06 57.2 4.2 35 424-464 140-174 (477)
45 3tnl_A Shikimate dehydrogenase 93.3 0.1 3.4E-06 52.3 5.9 50 304-367 138-187 (315)
46 3t4e_A Quinate/shikimate dehyd 93.2 0.099 3.4E-06 52.3 5.8 49 305-367 133-181 (312)
47 2o4c_A Erythronate-4-phosphate 93.1 0.68 2.3E-05 47.6 12.0 88 263-367 56-148 (380)
48 3o8q_A Shikimate 5-dehydrogena 93.0 0.095 3.3E-06 51.5 5.2 97 252-367 50-159 (281)
49 3tum_A Shikimate dehydrogenase 92.9 0.11 3.9E-06 50.8 5.6 48 305-366 110-157 (269)
50 3dtt_A NADP oxidoreductase; st 92.8 0.17 5.8E-06 47.6 6.5 106 321-447 17-127 (245)
51 3h8v_A Ubiquitin-like modifier 92.7 0.06 2.1E-06 53.5 3.3 37 321-368 34-70 (292)
52 2rir_A Dipicolinate synthase, 92.6 0.4 1.4E-05 46.5 9.1 99 312-445 149-247 (300)
53 3u62_A Shikimate dehydrogenase 92.6 0.1 3.4E-06 50.5 4.7 103 306-448 97-205 (253)
54 2eez_A Alanine dehydrogenase; 92.5 0.37 1.3E-05 48.3 8.9 101 320-446 163-268 (369)
55 3pwz_A Shikimate dehydrogenase 92.5 0.097 3.3E-06 51.2 4.4 99 252-367 44-153 (272)
56 2ekl_A D-3-phosphoglycerate de 92.5 1.4 4.9E-05 43.5 12.9 149 262-447 65-235 (313)
57 1lu9_A Methylene tetrahydromet 92.4 0.66 2.2E-05 44.5 10.1 86 266-367 60-152 (287)
58 3oj0_A Glutr, glutamyl-tRNA re 92.3 0.072 2.5E-06 45.8 2.9 92 324-448 22-114 (144)
59 3mw9_A GDH 1, glutamate dehydr 92.3 1.3 4.3E-05 47.5 12.9 184 242-446 135-350 (501)
60 1bgv_A Glutamate dehydrogenase 92.1 8.7 0.0003 40.5 18.9 184 244-446 136-348 (449)
61 3rui_A Ubiquitin-like modifier 92.1 0.065 2.2E-06 54.5 2.8 36 321-367 32-67 (340)
62 4e21_A 6-phosphogluconate dehy 92.0 0.34 1.2E-05 49.0 7.9 96 324-448 23-119 (358)
63 2ewd_A Lactate dehydrogenase,; 91.9 0.068 2.3E-06 52.5 2.6 101 324-448 5-125 (317)
64 1v9l_A Glutamate dehydrogenase 91.8 0.8 2.7E-05 47.9 10.6 178 244-445 116-322 (421)
65 1mld_A Malate dehydrogenase; o 91.8 0.42 1.4E-05 47.3 8.1 102 325-448 2-121 (314)
66 2rcy_A Pyrroline carboxylate r 91.6 0.84 2.9E-05 42.5 9.6 91 324-448 5-95 (262)
67 2egg_A AROE, shikimate 5-dehyd 91.6 0.19 6.4E-06 49.3 5.3 90 305-419 125-215 (297)
68 2gcg_A Glyoxylate reductase/hy 91.5 1.2 4.2E-05 44.1 11.2 146 264-445 75-247 (330)
69 3oet_A Erythronate-4-phosphate 91.4 0.81 2.8E-05 47.1 10.1 119 289-448 85-214 (381)
70 2zyd_A 6-phosphogluconate dehy 91.4 0.28 9.6E-06 51.4 6.8 102 323-448 15-117 (480)
71 1wwk_A Phosphoglycerate dehydr 91.4 1.3 4.5E-05 43.6 11.2 150 261-447 62-235 (307)
72 1hyh_A L-hicdh, L-2-hydroxyiso 91.3 0.23 7.8E-06 48.5 5.6 103 324-448 2-126 (309)
73 1nyt_A Shikimate 5-dehydrogena 91.3 0.24 8.4E-06 47.5 5.7 49 304-367 103-151 (271)
74 3tri_A Pyrroline-5-carboxylate 91.2 0.6 2.1E-05 45.0 8.5 35 324-367 4-38 (280)
75 3i83_A 2-dehydropantoate 2-red 91.2 0.31 1.1E-05 47.5 6.5 99 324-448 3-109 (320)
76 3k5p_A D-3-phosphoglycerate de 91.2 2.8 9.4E-05 43.7 13.9 147 263-448 78-248 (416)
77 1t2d_A LDH-P, L-lactate dehydr 91.1 0.082 2.8E-06 52.6 2.2 106 324-448 5-130 (322)
78 3kkj_A Amine oxidase, flavin-c 91.0 0.12 4.2E-06 44.1 2.9 32 324-367 3-34 (336)
79 2dbq_A Glyoxylate reductase; D 91.0 2.4 8.3E-05 42.1 12.7 148 261-445 63-241 (334)
80 1leh_A Leucine dehydrogenase; 90.9 0.75 2.6E-05 46.9 9.2 158 249-446 93-262 (364)
81 1txg_A Glycerol-3-phosphate de 90.9 0.4 1.4E-05 46.1 6.8 100 325-447 2-107 (335)
82 1p77_A Shikimate 5-dehydrogena 90.8 0.21 7.3E-06 48.0 4.8 49 304-367 103-151 (272)
83 1x0v_A GPD-C, GPDH-C, glycerol 90.8 0.59 2E-05 45.6 8.0 115 324-448 9-128 (354)
84 2hk9_A Shikimate dehydrogenase 90.7 0.29 9.8E-06 47.1 5.6 107 305-445 114-222 (275)
85 1y6j_A L-lactate dehydrogenase 90.6 0.6 2E-05 46.3 7.9 113 324-463 8-137 (318)
86 1ez4_A Lactate dehydrogenase; 90.6 0.23 7.7E-06 49.4 4.8 115 324-463 6-135 (318)
87 2zqz_A L-LDH, L-lactate dehydr 90.5 0.21 7.2E-06 49.9 4.6 115 324-463 10-139 (326)
88 2vhw_A Alanine dehydrogenase; 90.5 0.29 9.9E-06 49.5 5.6 99 320-444 165-268 (377)
89 2v6b_A L-LDH, L-lactate dehydr 90.3 0.13 4.3E-06 50.6 2.7 104 325-448 2-120 (304)
90 2hjr_A Malate dehydrogenase; m 90.3 0.091 3.1E-06 52.4 1.8 106 324-448 15-135 (328)
91 2j6i_A Formate dehydrogenase; 90.3 1.4 4.9E-05 44.5 10.6 96 261-367 80-197 (364)
92 2g1u_A Hypothetical protein TM 90.2 0.3 1E-05 42.4 4.8 32 324-367 20-51 (155)
93 1o6z_A MDH, malate dehydrogena 90.0 0.3 1E-05 47.9 5.1 114 325-463 2-133 (303)
94 1obb_A Maltase, alpha-glucosid 90.0 0.14 4.7E-06 54.3 2.9 121 324-464 4-167 (480)
95 4gsl_A Ubiquitin-like modifier 90.0 0.15 5.1E-06 55.8 3.2 37 321-368 324-360 (615)
96 2izz_A Pyrroline-5-carboxylate 89.9 0.65 2.2E-05 45.5 7.4 100 324-448 23-122 (322)
97 2i6t_A Ubiquitin-conjugating e 89.8 0.6 2E-05 46.2 7.1 110 324-462 15-138 (303)
98 1gtm_A Glutamate dehydrogenase 89.8 1.6 5.4E-05 45.4 10.6 167 244-430 115-309 (419)
99 3d1l_A Putative NADP oxidoredu 89.7 0.27 9.2E-06 46.2 4.3 96 324-448 11-106 (266)
100 1yj8_A Glycerol-3-phosphate de 89.7 0.42 1.5E-05 47.6 6.0 114 324-448 22-145 (375)
101 1b8p_A Protein (malate dehydro 89.6 0.61 2.1E-05 46.2 7.0 122 324-464 6-148 (329)
102 2hmt_A YUAA protein; RCK, KTN, 89.5 0.12 4.2E-06 42.9 1.7 33 323-367 6-38 (144)
103 2h78_A Hibadh, 3-hydroxyisobut 89.5 0.28 9.6E-06 47.0 4.4 95 324-448 4-101 (302)
104 3ado_A Lambda-crystallin; L-gu 89.3 0.41 1.4E-05 48.0 5.6 31 324-366 7-37 (319)
105 1s6y_A 6-phospho-beta-glucosid 89.2 0.11 3.9E-06 54.3 1.5 122 324-463 8-166 (450)
106 1jw9_B Molybdopterin biosynthe 89.2 0.17 5.9E-06 48.3 2.6 34 324-368 32-65 (249)
107 1sc6_A PGDH, D-3-phosphoglycer 89.1 5.8 0.0002 40.8 14.2 145 263-446 67-235 (404)
108 2p4q_A 6-phosphogluconate dehy 89.0 0.78 2.7E-05 48.4 7.7 101 324-448 11-113 (497)
109 3fef_A Putative glucosidase LP 88.8 0.36 1.2E-05 50.8 4.9 106 324-448 6-150 (450)
110 3ba1_A HPPR, hydroxyphenylpyru 88.7 1.7 5.7E-05 43.6 9.5 91 320-448 161-255 (333)
111 1up7_A 6-phospho-beta-glucosid 88.7 0.46 1.6E-05 49.2 5.6 118 323-463 2-155 (417)
112 1zud_1 Adenylyltransferase THI 88.6 0.17 5.8E-06 48.5 2.2 104 324-443 29-150 (251)
113 1u8x_X Maltose-6'-phosphate gl 88.6 0.12 4.2E-06 54.5 1.2 121 324-463 29-185 (472)
114 3vh1_A Ubiquitin-like modifier 88.6 0.18 6.3E-06 54.9 2.6 36 321-367 325-360 (598)
115 1ks9_A KPA reductase;, 2-dehyd 88.6 0.72 2.5E-05 43.1 6.4 101 325-449 2-102 (291)
116 3vku_A L-LDH, L-lactate dehydr 88.5 0.47 1.6E-05 47.7 5.3 115 324-463 10-139 (326)
117 3qsg_A NAD-binding phosphogluc 88.3 1.2 4.1E-05 43.4 8.1 94 324-445 25-118 (312)
118 2pgd_A 6-phosphogluconate dehy 88.2 0.95 3.2E-05 47.2 7.6 101 324-448 3-105 (482)
119 3h5n_A MCCB protein; ubiquitin 88.1 0.27 9.4E-06 49.6 3.4 33 324-367 119-151 (353)
120 3pef_A 6-phosphogluconate dehy 88.0 0.38 1.3E-05 45.9 4.2 94 324-448 2-99 (287)
121 1oju_A MDH, malate dehydrogena 87.9 0.23 7.9E-06 49.1 2.7 116 325-463 2-132 (294)
122 2ew2_A 2-dehydropantoate 2-red 87.9 0.32 1.1E-05 46.0 3.6 32 324-367 4-35 (316)
123 3k96_A Glycerol-3-phosphate de 87.9 1.4 4.6E-05 44.4 8.3 102 324-449 30-138 (356)
124 4gwg_A 6-phosphogluconate dehy 87.9 1.2 4E-05 47.2 8.1 102 324-448 5-107 (484)
125 4g2n_A D-isomer specific 2-hyd 87.8 3.5 0.00012 41.6 11.3 125 289-448 118-267 (345)
126 1ldn_A L-lactate dehydrogenase 87.7 0.18 6E-06 49.9 1.7 116 324-463 7-137 (316)
127 1a5z_A L-lactate dehydrogenase 87.7 0.45 1.5E-05 46.9 4.5 104 325-448 2-120 (319)
128 4fgw_A Glycerol-3-phosphate de 87.6 0.9 3.1E-05 46.9 6.9 24 324-347 35-58 (391)
129 1bg6_A N-(1-D-carboxylethyl)-L 87.5 0.76 2.6E-05 44.5 6.0 100 324-445 5-110 (359)
130 1x7d_A Ornithine cyclodeaminas 87.2 1.2 4.2E-05 44.8 7.6 117 306-457 117-238 (350)
131 3gvx_A Glycerate dehydrogenase 87.2 3.7 0.00012 40.5 10.8 92 319-448 118-213 (290)
132 3jtm_A Formate dehydrogenase, 87.2 1.9 6.3E-05 43.7 8.8 151 263-448 84-260 (351)
133 3ggo_A Prephenate dehydrogenas 87.1 0.97 3.3E-05 44.5 6.6 34 324-367 34-67 (314)
134 4dll_A 2-hydroxy-3-oxopropiona 87.1 0.39 1.3E-05 47.0 3.7 95 324-448 32-128 (320)
135 1npy_A Hypothetical shikimate 87.1 0.56 1.9E-05 45.7 4.8 48 305-367 105-152 (271)
136 1smk_A Malate dehydrogenase, g 87.0 0.41 1.4E-05 47.5 3.9 104 324-448 9-129 (326)
137 2iz1_A 6-phosphogluconate dehy 86.9 0.91 3.1E-05 47.2 6.6 101 324-448 6-107 (474)
138 1ur5_A Malate dehydrogenase; o 86.8 0.35 1.2E-05 47.6 3.2 103 324-448 3-123 (309)
139 2xxj_A L-LDH, L-lactate dehydr 86.8 0.31 1E-05 48.2 2.8 114 325-463 2-130 (310)
140 3gt0_A Pyrroline-5-carboxylate 86.8 1.1 3.8E-05 41.8 6.5 34 324-366 3-37 (247)
141 4hy3_A Phosphoglycerate oxidor 86.6 1.9 6.4E-05 44.1 8.6 116 298-448 133-270 (365)
142 2qrj_A Saccharopine dehydrogen 86.6 1.4 4.9E-05 45.7 7.7 82 323-444 214-300 (394)
143 1y8q_A Ubiquitin-like 1 activa 86.5 0.37 1.3E-05 48.5 3.2 33 324-367 37-69 (346)
144 3g0o_A 3-hydroxyisobutyrate de 86.4 0.32 1.1E-05 47.1 2.6 32 324-367 8-39 (303)
145 3doj_A AT3G25530, dehydrogenas 86.4 0.82 2.8E-05 44.4 5.6 95 324-448 22-119 (310)
146 1pgj_A 6PGDH, 6-PGDH, 6-phosph 86.3 0.7 2.4E-05 48.3 5.4 104 324-448 2-107 (478)
147 2d0i_A Dehydrogenase; structur 86.2 2.2 7.6E-05 42.5 8.7 91 319-445 142-236 (333)
148 1nvt_A Shikimate 5'-dehydrogen 86.1 0.72 2.5E-05 44.5 4.9 49 303-367 111-159 (287)
149 3b1f_A Putative prephenate deh 86.1 0.79 2.7E-05 43.5 5.2 34 324-367 7-40 (290)
150 2d4a_B Malate dehydrogenase; a 85.8 0.43 1.5E-05 47.2 3.3 111 325-462 1-129 (308)
151 3hg7_A D-isomer specific 2-hyd 85.8 1.9 6.5E-05 43.2 8.0 58 299-368 103-173 (324)
152 2cuk_A Glycerate dehydrogenase 85.8 4.4 0.00015 40.0 10.5 120 289-448 89-233 (311)
153 1guz_A Malate dehydrogenase; o 85.6 0.33 1.1E-05 47.7 2.3 103 325-448 2-122 (310)
154 3cky_A 2-hydroxymethyl glutara 85.4 0.71 2.4E-05 43.9 4.5 95 324-448 5-102 (301)
155 1xdw_A NAD+-dependent (R)-2-hy 85.3 3.8 0.00013 40.7 9.9 141 267-446 72-236 (331)
156 3vrd_B FCCB subunit, flavocyto 85.2 0.62 2.1E-05 45.9 4.1 35 323-367 2-36 (401)
157 3evt_A Phosphoglycerate dehydr 85.1 4.2 0.00014 40.7 10.1 151 261-448 57-231 (324)
158 3hn2_A 2-dehydropantoate 2-red 85.0 0.6 2.1E-05 45.4 3.8 104 324-448 3-107 (312)
159 3pdu_A 3-hydroxyisobutyrate de 85.0 0.72 2.5E-05 44.0 4.3 93 324-446 2-97 (287)
160 2d5c_A AROE, shikimate 5-dehyd 84.9 1 3.4E-05 42.7 5.3 104 305-445 102-207 (263)
161 2g76_A 3-PGDH, D-3-phosphoglyc 84.7 3.7 0.00013 41.1 9.6 125 288-447 112-258 (335)
162 3c24_A Putative oxidoreductase 84.7 0.95 3.2E-05 43.1 5.0 93 324-448 12-105 (286)
163 4huj_A Uncharacterized protein 84.6 0.47 1.6E-05 43.9 2.7 93 324-448 24-117 (220)
164 4dgs_A Dehydrogenase; structur 84.5 4.2 0.00014 41.0 9.8 115 299-451 130-265 (340)
165 3ghy_A Ketopantoate reductase 84.4 0.66 2.3E-05 45.5 3.8 102 324-448 4-108 (335)
166 1mx3_A CTBP1, C-terminal bindi 84.2 12 0.0004 37.7 13.0 153 261-448 81-263 (347)
167 2nac_A NAD-dependent formate d 84.1 2.6 8.8E-05 43.4 8.3 124 289-445 137-284 (393)
168 3d0o_A L-LDH 1, L-lactate dehy 84.1 0.48 1.6E-05 46.8 2.7 116 324-463 7-137 (317)
169 1qp8_A Formate dehydrogenase; 84.0 3.7 0.00013 40.5 9.0 143 262-445 47-211 (303)
170 1hyu_A AHPF, alkyl hydroperoxi 83.9 0.5 1.7E-05 49.3 2.9 103 251-367 134-244 (521)
171 2i99_A MU-crystallin homolog; 83.7 2.8 9.5E-05 41.1 8.0 89 324-444 136-226 (312)
172 1lld_A L-lactate dehydrogenase 83.6 0.44 1.5E-05 46.0 2.2 106 324-448 8-128 (319)
173 3fi9_A Malate dehydrogenase; s 83.6 0.84 2.9E-05 46.2 4.3 118 321-463 6-140 (343)
174 2cvz_A Dehydrogenase, 3-hydrox 83.6 0.68 2.3E-05 43.5 3.4 29 325-366 3-31 (289)
175 3l6d_A Putative oxidoreductase 83.5 0.75 2.6E-05 44.7 3.8 33 323-367 9-41 (306)
176 3qha_A Putative oxidoreductase 83.3 1.2 4.2E-05 42.9 5.2 94 324-448 16-109 (296)
177 1vpd_A Tartronate semialdehyde 83.1 0.76 2.6E-05 43.6 3.6 95 324-448 6-103 (299)
178 1j4a_A D-LDH, D-lactate dehydr 82.9 6.6 0.00023 39.0 10.4 125 288-448 93-239 (333)
179 3tl2_A Malate dehydrogenase; c 82.8 0.42 1.4E-05 47.6 1.7 116 324-463 9-141 (315)
180 2yq5_A D-isomer specific 2-hyd 82.8 8.2 0.00028 38.9 11.1 123 289-448 94-240 (343)
181 1tt5_B Ubiquitin-activating en 82.6 0.51 1.7E-05 49.3 2.3 34 323-367 40-73 (434)
182 3gvi_A Malate dehydrogenase; N 82.6 0.82 2.8E-05 45.8 3.7 116 324-463 8-138 (324)
183 3pp8_A Glyoxylate/hydroxypyruv 82.5 3.1 0.00011 41.4 7.8 92 264-367 58-171 (315)
184 2uyy_A N-PAC protein; long-cha 82.4 1.3 4.6E-05 42.5 5.1 95 324-448 31-128 (316)
185 3nep_X Malate dehydrogenase; h 82.3 0.45 1.5E-05 47.5 1.7 116 325-463 2-132 (314)
186 2g5c_A Prephenate dehydrogenas 82.2 1.8 6.1E-05 40.8 5.8 34 324-367 2-35 (281)
187 4hb9_A Similarities with proba 82.1 0.77 2.6E-05 44.3 3.2 32 324-367 2-33 (412)
188 1dxy_A D-2-hydroxyisocaproate 82.1 7.2 0.00025 38.8 10.4 124 288-448 91-237 (333)
189 2f1k_A Prephenate dehydrogenas 81.6 1.7 5.9E-05 40.8 5.4 31 325-367 2-32 (279)
190 1hdo_A Biliverdin IX beta redu 81.6 3 0.0001 36.3 6.6 98 324-444 4-111 (206)
191 2x0j_A Malate dehydrogenase; o 81.3 1.1 3.8E-05 44.4 4.1 117 325-464 2-133 (294)
192 2w2k_A D-mandelate dehydrogena 81.2 6.6 0.00023 39.3 9.8 36 320-367 160-196 (348)
193 1yb4_A Tartronic semialdehyde 81.2 1.2 4E-05 42.2 4.1 93 324-448 4-100 (295)
194 2pi1_A D-lactate dehydrogenase 81.1 3.6 0.00012 41.1 7.8 149 262-448 61-234 (334)
195 3phh_A Shikimate dehydrogenase 81.1 0.83 2.8E-05 44.8 3.1 99 306-446 108-212 (269)
196 3pqe_A L-LDH, L-lactate dehydr 81.0 0.68 2.3E-05 46.4 2.5 116 324-463 6-136 (326)
197 3p7m_A Malate dehydrogenase; p 80.8 0.52 1.8E-05 47.0 1.6 116 324-463 6-136 (321)
198 4b4u_A Bifunctional protein fo 80.5 3.1 0.00011 41.8 7.1 131 253-429 97-243 (303)
199 3fbs_A Oxidoreductase; structu 80.5 0.99 3.4E-05 41.5 3.3 32 324-367 3-34 (297)
200 4egb_A DTDP-glucose 4,6-dehydr 80.5 3.1 0.0001 39.7 6.8 104 323-443 24-148 (346)
201 3m6i_A L-arabinitol 4-dehydrog 80.2 2.2 7.6E-05 41.8 5.8 58 294-366 155-212 (363)
202 1hye_A L-lactate/malate dehydr 80.2 0.55 1.9E-05 46.2 1.5 115 325-462 2-135 (313)
203 4ej6_A Putative zinc-binding d 79.9 3.4 0.00012 41.0 7.1 58 294-366 158-215 (370)
204 3hwr_A 2-dehydropantoate 2-red 79.8 0.6 2.1E-05 45.6 1.6 96 323-448 19-124 (318)
205 1y8q_B Anthracycline-, ubiquit 79.8 0.82 2.8E-05 50.2 2.8 34 323-367 17-50 (640)
206 4e5n_A Thermostable phosphite 79.7 2.2 7.6E-05 42.6 5.7 127 288-448 90-240 (330)
207 3pdi_B Nitrogenase MOFE cofact 79.4 2 7E-05 44.8 5.5 196 149-440 177-397 (458)
208 3f8d_A Thioredoxin reductase ( 79.3 1.1 3.9E-05 41.5 3.3 32 324-367 16-47 (323)
209 4ezb_A Uncharacterized conserv 79.1 2.1 7.1E-05 42.0 5.2 33 324-367 25-57 (317)
210 1y7t_A Malate dehydrogenase; N 79.0 0.89 3E-05 44.5 2.5 110 324-447 5-133 (327)
211 2zbw_A Thioredoxin reductase; 78.9 1.1 3.8E-05 42.4 3.1 33 324-368 6-38 (335)
212 1pl8_A Human sorbitol dehydrog 78.8 3 0.0001 41.0 6.2 49 303-366 156-204 (356)
213 3hdj_A Probable ornithine cycl 78.4 9.8 0.00033 37.6 9.9 104 324-459 122-227 (313)
214 3lzw_A Ferredoxin--NADP reduct 78.3 1.2 4.1E-05 41.7 3.1 32 324-367 8-39 (332)
215 2pv7_A T-protein [includes: ch 77.9 3.9 0.00013 39.4 6.7 32 324-367 22-54 (298)
216 3gg9_A D-3-phosphoglycerate de 77.7 7.2 0.00025 39.4 8.8 127 288-448 98-255 (352)
217 3d1c_A Flavin-containing putat 77.7 1.3 4.5E-05 42.4 3.2 34 324-368 5-38 (369)
218 4eez_A Alcohol dehydrogenase 1 77.6 4.1 0.00014 39.4 6.7 48 304-366 149-196 (348)
219 1np3_A Ketol-acid reductoisome 77.6 1.8 6.3E-05 42.8 4.4 34 322-367 15-48 (338)
220 3h8l_A NADH oxidase; membrane 77.3 1.5 5.3E-05 43.3 3.7 38 324-370 2-39 (409)
221 3itj_A Thioredoxin reductase 1 77.1 1 3.5E-05 42.3 2.2 32 324-367 23-54 (338)
222 1lss_A TRK system potassium up 76.9 1.8 6.1E-05 35.6 3.4 32 324-367 5-36 (140)
223 3oz2_A Digeranylgeranylglycero 76.8 1.3 4.5E-05 42.2 2.9 30 326-367 7-36 (397)
224 3ip1_A Alcohol dehydrogenase, 76.7 6.2 0.00021 39.5 8.0 84 324-430 215-304 (404)
225 3fg2_P Putative rubredoxin red 76.6 1.4 4.8E-05 43.8 3.2 35 324-368 2-36 (404)
226 3ic5_A Putative saccharopine d 76.5 1.6 5.4E-05 34.8 2.9 85 324-432 6-91 (118)
227 3c85_A Putative glutathione-re 76.5 1.9 6.5E-05 38.0 3.7 35 322-367 38-72 (183)
228 4a9w_A Monooxygenase; baeyer-v 76.4 1.3 4.4E-05 41.7 2.7 33 324-368 4-36 (357)
229 4id9_A Short-chain dehydrogena 76.0 5.4 0.00018 38.0 7.0 96 320-444 16-126 (347)
230 3dme_A Conserved exported prot 75.9 1.6 5.6E-05 41.3 3.3 32 324-367 5-36 (369)
231 3llv_A Exopolyphosphatase-rela 75.9 1.7 6E-05 36.5 3.2 32 324-367 7-38 (141)
232 2ywl_A Thioredoxin reductase r 75.8 1.8 6E-05 37.6 3.3 32 324-367 2-33 (180)
233 2jae_A L-amino acid oxidase; o 75.8 1.3 4.6E-05 44.7 2.8 34 324-369 12-45 (489)
234 3r9u_A Thioredoxin reductase; 75.8 1.6 5.4E-05 40.5 3.1 32 324-367 5-37 (315)
235 1ryi_A Glycine oxidase; flavop 75.4 1.5 5.1E-05 42.3 3.0 33 324-368 18-50 (382)
236 2q7v_A Thioredoxin reductase; 75.2 1.7 5.9E-05 41.1 3.3 32 324-367 9-40 (325)
237 2nvu_B Maltose binding protein 75.2 0.93 3.2E-05 50.0 1.6 36 322-368 410-445 (805)
238 3ldh_A Lactate dehydrogenase; 75.0 0.8 2.7E-05 46.2 0.9 116 324-463 22-152 (330)
239 3hyw_A Sulfide-quinone reducta 74.9 2.1 7.1E-05 43.2 4.0 34 324-367 3-36 (430)
240 3fwz_A Inner membrane protein 74.8 2.4 8.1E-05 36.1 3.7 32 324-367 8-39 (140)
241 3rp8_A Flavoprotein monooxygen 74.7 1.9 6.5E-05 42.5 3.5 34 323-368 23-56 (407)
242 1yvv_A Amine oxidase, flavin-c 74.7 1.7 5.8E-05 41.0 3.1 33 324-368 3-35 (336)
243 2gf2_A Hibadh, 3-hydroxyisobut 74.6 3.3 0.00011 39.1 5.1 30 325-366 2-31 (296)
244 1y56_B Sarcosine oxidase; dehy 74.5 1.7 5.8E-05 42.0 3.1 33 324-368 6-38 (382)
245 1pqw_A Polyketide synthase; ro 74.3 6 0.0002 35.0 6.4 50 303-367 22-72 (198)
246 3ab1_A Ferredoxin--NADP reduct 74.3 1.9 6.4E-05 41.6 3.3 33 324-368 15-47 (360)
247 4a2c_A Galactitol-1-phosphate 74.3 6.2 0.00021 38.1 7.0 56 296-366 138-193 (346)
248 3cty_A Thioredoxin reductase; 74.3 1.9 6.4E-05 40.7 3.3 32 324-367 17-48 (319)
249 3cgv_A Geranylgeranyl reductas 74.1 1.8 6.1E-05 41.8 3.1 33 324-368 5-37 (397)
250 3s5w_A L-ornithine 5-monooxyge 74.1 2.3 7.8E-05 42.6 4.0 38 324-368 31-68 (463)
251 3alj_A 2-methyl-3-hydroxypyrid 74.0 1.9 6.6E-05 42.1 3.4 33 324-368 12-44 (379)
252 2gf3_A MSOX, monomeric sarcosi 73.9 1.8 6.2E-05 41.7 3.1 35 324-370 4-38 (389)
253 2vdc_G Glutamate synthase [NAD 73.8 2.1 7.1E-05 44.2 3.7 34 323-368 122-155 (456)
254 3axb_A Putative oxidoreductase 73.6 2.6 8.8E-05 42.1 4.2 32 324-366 24-55 (448)
255 4aj2_A L-lactate dehydrogenase 73.5 1.1 3.9E-05 44.9 1.6 116 324-463 20-150 (331)
256 2xdo_A TETX2 protein; tetracyc 73.5 1.9 6.4E-05 42.6 3.1 33 324-368 27-59 (398)
257 3k7m_X 6-hydroxy-L-nicotine ox 73.4 1.9 6.6E-05 42.5 3.2 33 324-368 2-34 (431)
258 3iwa_A FAD-dependent pyridine 73.2 2.1 7.1E-05 43.5 3.5 36 324-369 4-39 (472)
259 2vou_A 2,6-dihydroxypyridine h 73.1 2.2 7.4E-05 42.1 3.5 33 324-368 6-38 (397)
260 2gag_B Heterotetrameric sarcos 73.0 2 6.9E-05 41.6 3.2 35 324-368 22-56 (405)
261 1tt5_A APPBP1, amyloid protein 72.9 1.2 4E-05 47.7 1.6 34 324-368 33-66 (531)
262 2uzz_A N-methyl-L-tryptophan o 72.8 1.9 6.6E-05 41.4 3.0 34 324-369 3-36 (372)
263 3lxd_A FAD-dependent pyridine 72.8 2.1 7.1E-05 42.7 3.3 35 324-368 10-44 (415)
264 3abi_A Putative uncharacterize 72.7 1.2 3.9E-05 44.4 1.4 93 324-445 17-109 (365)
265 4g6h_A Rotenone-insensitive NA 72.7 1.2 4.2E-05 46.4 1.7 32 324-367 43-74 (502)
266 1zk7_A HGII, reductase, mercur 72.5 2.3 8E-05 43.1 3.7 32 324-367 5-36 (467)
267 3kb6_A D-lactate dehydrogenase 72.5 14 0.00048 36.9 9.3 120 289-444 88-230 (334)
268 3nrc_A Enoyl-[acyl-carrier-pro 72.5 2.2 7.7E-05 40.2 3.3 38 319-368 22-62 (280)
269 1c0p_A D-amino acid oxidase; a 72.4 2.5 8.5E-05 40.8 3.7 33 324-368 7-39 (363)
270 2gqw_A Ferredoxin reductase; f 72.2 2.7 9.2E-05 42.1 4.0 37 324-370 8-44 (408)
271 3fpc_A NADP-dependent alcohol 72.0 2.5 8.6E-05 41.3 3.6 49 303-366 151-199 (352)
272 3nix_A Flavoprotein/dehydrogen 71.9 1.8 6.2E-05 42.4 2.6 33 324-368 6-38 (421)
273 4e12_A Diketoreductase; oxidor 71.9 2.3 7.9E-05 40.7 3.3 32 324-367 5-36 (283)
274 2x3n_A Probable FAD-dependent 71.9 2.1 7.3E-05 41.9 3.1 33 324-368 7-39 (399)
275 3ics_A Coenzyme A-disulfide re 71.8 2.6 8.9E-05 44.2 3.9 36 324-369 37-72 (588)
276 2oln_A NIKD protein; flavoprot 71.7 2.3 7.8E-05 41.5 3.3 35 324-370 5-39 (397)
277 3i6d_A Protoporphyrinogen oxid 71.3 3.1 0.00011 41.1 4.2 38 324-367 6-43 (470)
278 3gg2_A Sugar dehydrogenase, UD 71.0 5.9 0.0002 41.1 6.4 32 324-367 3-34 (450)
279 3c96_A Flavin-containing monoo 71.0 2.5 8.6E-05 41.8 3.4 33 324-367 5-37 (410)
280 3c4a_A Probable tryptophan hyd 71.0 2.9 9.8E-05 41.1 3.8 33 325-367 2-34 (381)
281 2q0l_A TRXR, thioredoxin reduc 70.9 2.5 8.5E-05 39.5 3.2 33 324-367 2-34 (311)
282 1k0i_A P-hydroxybenzoate hydro 70.9 2.6 8.9E-05 41.1 3.4 33 324-368 3-35 (394)
283 1e3j_A NADP(H)-dependent ketos 70.8 5.5 0.00019 38.9 5.8 44 296-343 146-189 (352)
284 2dq4_A L-threonine 3-dehydroge 70.8 3.6 0.00012 40.0 4.5 54 297-366 143-197 (343)
285 2xve_A Flavin-containing monoo 70.8 2.3 7.7E-05 43.6 3.1 39 324-368 3-41 (464)
286 1id1_A Putative potassium chan 70.7 2.9 9.9E-05 35.9 3.3 33 323-367 3-35 (153)
287 3ka7_A Oxidoreductase; structu 70.7 2.5 8.6E-05 41.5 3.3 32 325-368 2-33 (425)
288 3dje_A Fructosyl amine: oxygen 70.6 2.6 9E-05 41.8 3.5 36 324-370 7-42 (438)
289 3g3e_A D-amino-acid oxidase; F 70.6 3.7 0.00013 39.4 4.4 38 325-368 2-39 (351)
290 1vdc_A NTR, NADPH dependent th 70.6 1.9 6.7E-05 40.7 2.4 31 324-366 9-39 (333)
291 2bc0_A NADH oxidase; flavoprot 70.5 3.5 0.00012 42.3 4.5 36 324-368 36-71 (490)
292 3ek2_A Enoyl-(acyl-carrier-pro 70.4 2 6.9E-05 39.6 2.4 38 318-367 9-49 (271)
293 3lk7_A UDP-N-acetylmuramoylala 70.4 2.7 9.2E-05 43.2 3.6 36 319-366 5-40 (451)
294 3hhp_A Malate dehydrogenase; M 70.4 5.3 0.00018 39.7 5.6 104 325-448 2-122 (312)
295 4eqs_A Coenzyme A disulfide re 70.1 2.4 8.1E-05 43.1 3.1 34 325-368 2-35 (437)
296 2weu_A Tryptophan 5-halogenase 70.0 2.7 9.1E-05 43.0 3.4 37 324-369 3-39 (511)
297 3oc4_A Oxidoreductase, pyridin 69.8 2.9 9.8E-05 42.3 3.6 35 324-368 3-37 (452)
298 3ef6_A Toluene 1,2-dioxygenase 69.8 2.9 0.0001 41.7 3.6 36 324-369 3-38 (410)
299 3cmm_A Ubiquitin-activating en 69.7 2.6 8.8E-05 48.6 3.6 34 323-367 27-60 (1015)
300 3uox_A Otemo; baeyer-villiger 69.7 2.6 9E-05 44.5 3.4 33 324-368 10-42 (545)
301 1f0y_A HCDH, L-3-hydroxyacyl-C 69.5 2.8 9.5E-05 40.3 3.3 32 324-367 16-47 (302)
302 2r9z_A Glutathione amide reduc 69.4 2.8 9.7E-05 42.7 3.5 32 324-367 5-36 (463)
303 1dxl_A Dihydrolipoamide dehydr 69.4 3.2 0.00011 41.9 3.9 32 324-367 7-38 (470)
304 4gcm_A TRXR, thioredoxin reduc 69.1 2.7 9.4E-05 39.5 3.1 32 324-367 7-38 (312)
305 3kd9_A Coenzyme A disulfide re 69.0 3.6 0.00012 41.5 4.1 35 324-368 4-38 (449)
306 5mdh_A Malate dehydrogenase; o 68.9 0.95 3.3E-05 45.4 -0.2 121 324-464 4-144 (333)
307 3nrn_A Uncharacterized protein 68.9 2.8 9.6E-05 41.4 3.2 32 325-368 2-33 (421)
308 2d8a_A PH0655, probable L-thre 68.8 3.5 0.00012 40.3 3.9 48 303-366 153-200 (348)
309 3c4n_A Uncharacterized protein 68.8 3.3 0.00011 41.2 3.7 34 324-367 37-70 (405)
310 2a87_A TRXR, TR, thioredoxin r 68.8 2.4 8.2E-05 40.5 2.6 32 324-367 15-46 (335)
311 1trb_A Thioredoxin reductase; 68.5 2 6.9E-05 40.2 2.0 32 324-367 6-37 (320)
312 3ntd_A FAD-dependent pyridine 68.5 3.2 0.00011 42.9 3.7 36 324-369 2-37 (565)
313 3ihm_A Styrene monooxygenase A 68.5 2.9 0.0001 42.1 3.3 32 324-367 23-54 (430)
314 3fpz_A Thiazole biosynthetic e 68.4 4.3 0.00015 38.9 4.4 34 324-367 66-99 (326)
315 1xdi_A RV3303C-LPDA; reductase 68.4 3.3 0.00011 42.5 3.7 36 324-368 3-38 (499)
316 1mo9_A ORF3; nucleotide bindin 68.4 2.9 9.9E-05 43.4 3.3 33 324-368 44-76 (523)
317 3h28_A Sulfide-quinone reducta 68.1 3 0.0001 41.8 3.3 36 324-369 3-38 (430)
318 2e4g_A Tryptophan halogenase; 68.1 3.1 0.00011 43.5 3.5 37 324-369 26-62 (550)
319 2hqm_A GR, grase, glutathione 68.0 2.6 9.1E-05 43.1 2.9 32 324-367 12-43 (479)
320 3k30_A Histamine dehydrogenase 67.9 3.6 0.00012 44.4 4.0 33 324-368 392-424 (690)
321 3v76_A Flavoprotein; structura 67.7 2.7 9.4E-05 42.8 3.0 34 324-369 28-61 (417)
322 2cdu_A NADPH oxidase; flavoenz 67.7 3.7 0.00013 41.4 3.9 34 325-368 2-35 (452)
323 1lqt_A FPRA; NADP+ derivative, 67.6 3.4 0.00012 42.4 3.7 37 324-367 4-42 (456)
324 3r6d_A NAD-dependent epimerase 67.6 3.3 0.00011 37.1 3.2 95 324-442 6-106 (221)
325 1nhp_A NADH peroxidase; oxidor 67.5 3.8 0.00013 41.2 3.9 34 325-368 2-35 (447)
326 1m6i_A Programmed cell death p 67.4 4.8 0.00017 41.5 4.8 35 324-368 12-46 (493)
327 4ap3_A Steroid monooxygenase; 67.3 2.8 9.6E-05 44.3 3.0 33 324-368 22-54 (549)
328 2qae_A Lipoamide, dihydrolipoy 67.1 3.4 0.00012 41.9 3.5 32 324-367 3-34 (468)
329 3urh_A Dihydrolipoyl dehydroge 67.0 3 0.0001 42.7 3.1 33 324-368 26-58 (491)
330 2raf_A Putative dinucleotide-b 66.7 3.5 0.00012 37.7 3.2 34 322-367 18-51 (209)
331 3qj4_A Renalase; FAD/NAD(P)-bi 66.7 2.2 7.4E-05 41.0 1.8 35 324-367 2-36 (342)
332 2aqj_A Tryptophan halogenase, 66.6 3.2 0.00011 43.1 3.2 36 324-368 6-41 (538)
333 2yqu_A 2-oxoglutarate dehydrog 66.5 3.3 0.00011 41.8 3.3 33 324-368 2-34 (455)
334 1zmd_A Dihydrolipoyl dehydroge 66.5 3.3 0.00011 42.1 3.3 33 324-368 7-39 (474)
335 2cul_A Glucose-inhibited divis 66.4 3.6 0.00012 37.7 3.3 32 324-367 4-35 (232)
336 1ebd_A E3BD, dihydrolipoamide 66.0 3.1 0.00011 42.0 3.0 32 324-367 4-35 (455)
337 3sx6_A Sulfide-quinone reducta 66.0 3.2 0.00011 41.8 3.0 37 324-369 5-41 (437)
338 1fl2_A Alkyl hydroperoxide red 66.0 3 0.0001 38.9 2.7 32 324-367 2-33 (310)
339 3dfz_A SIRC, precorrin-2 dehyd 65.9 2.7 9.3E-05 40.1 2.3 35 320-366 28-62 (223)
340 2bry_A NEDD9 interacting prote 65.6 3.9 0.00013 42.4 3.7 33 324-368 93-125 (497)
341 1ges_A Glutathione reductase; 65.6 2.9 9.8E-05 42.5 2.6 32 324-367 5-36 (450)
342 1yqd_A Sinapyl alcohol dehydro 65.5 9.4 0.00032 37.7 6.2 47 305-366 173-219 (366)
343 2pzm_A Putative nucleotide sug 65.4 8.7 0.0003 36.6 5.8 108 317-444 14-136 (330)
344 2gv8_A Monooxygenase; FMO, FAD 65.3 5.9 0.0002 39.8 4.9 35 324-368 7-41 (447)
345 2cdc_A Glucose dehydrogenase g 65.3 11 0.00037 37.1 6.6 33 323-367 181-213 (366)
346 3cgb_A Pyridine nucleotide-dis 65.2 4.2 0.00014 41.6 3.8 36 324-369 37-72 (480)
347 3m2p_A UDP-N-acetylglucosamine 64.7 15 0.00051 34.5 7.3 93 324-443 3-108 (311)
348 2eq6_A Pyruvate dehydrogenase 64.6 3.8 0.00013 41.7 3.3 33 324-368 7-39 (464)
349 1onf_A GR, grase, glutathione 64.6 3.7 0.00013 42.3 3.2 33 324-368 3-35 (500)
350 3i3l_A Alkylhalidase CMLS; fla 64.5 3.9 0.00013 43.7 3.5 32 324-367 24-55 (591)
351 2dph_A Formaldehyde dismutase; 64.5 10 0.00035 37.7 6.4 48 304-366 171-218 (398)
352 1e6u_A GDP-fucose synthetase; 64.4 6.3 0.00022 37.0 4.6 87 323-444 3-107 (321)
353 2e1m_A L-glutamate oxidase; L- 64.4 4.1 0.00014 41.5 3.4 32 324-367 45-76 (376)
354 3dhn_A NAD-dependent epimerase 63.9 7.9 0.00027 34.5 4.9 96 324-443 5-111 (227)
355 4a5l_A Thioredoxin reductase; 63.9 3.1 0.00011 38.8 2.3 31 325-367 6-36 (314)
356 1w4x_A Phenylacetone monooxyge 63.8 3.8 0.00013 42.7 3.2 33 324-368 17-49 (542)
357 2qa1_A PGAE, polyketide oxygen 63.8 3.9 0.00013 42.4 3.2 32 324-367 12-43 (500)
358 1v59_A Dihydrolipoamide dehydr 63.7 4.1 0.00014 41.3 3.3 33 324-368 6-38 (478)
359 1q1r_A Putidaredoxin reductase 63.6 4.4 0.00015 40.9 3.5 36 324-369 5-40 (431)
360 2a8x_A Dihydrolipoyl dehydroge 63.5 3.9 0.00013 41.4 3.1 32 324-367 4-35 (464)
361 2qa2_A CABE, polyketide oxygen 63.5 4.3 0.00015 42.1 3.5 32 324-367 13-44 (499)
362 3fys_A Protein DEGV; fatty aci 63.4 4.1 0.00014 40.7 3.2 153 147-358 16-179 (315)
363 1kol_A Formaldehyde dehydrogen 63.4 9.6 0.00033 37.8 5.9 48 304-366 171-218 (398)
364 1lvl_A Dihydrolipoamide dehydr 63.3 4.1 0.00014 41.4 3.2 32 324-367 6-37 (458)
365 3l8k_A Dihydrolipoyl dehydroge 63.0 4.1 0.00014 41.4 3.1 33 324-368 5-37 (466)
366 2o7s_A DHQ-SDH PR, bifunctiona 63.0 5.7 0.00019 41.8 4.3 35 321-367 362-396 (523)
367 2q1w_A Putative nucleotide sug 62.9 13 0.00045 35.4 6.6 104 319-443 17-136 (333)
368 1s3e_A Amine oxidase [flavin-c 62.9 4 0.00014 41.8 3.1 35 324-370 5-39 (520)
369 3lad_A Dihydrolipoamide dehydr 62.8 5 0.00017 40.6 3.8 33 324-368 4-36 (476)
370 3ihg_A RDME; flavoenzyme, anth 62.7 3.7 0.00013 42.4 2.8 33 324-368 6-38 (535)
371 1rsg_A FMS1 protein; FAD bindi 62.6 4.2 0.00014 41.8 3.2 22 324-345 9-30 (516)
372 3o0h_A Glutathione reductase; 62.5 4.6 0.00016 41.2 3.5 32 324-367 27-58 (484)
373 4gbj_A 6-phosphogluconate dehy 62.2 3 0.0001 40.6 2.0 92 324-448 6-101 (297)
374 2wtb_A MFP2, fatty acid multif 62.1 6.7 0.00023 43.2 4.9 32 324-367 313-344 (725)
375 2pyx_A Tryptophan halogenase; 62.1 4.2 0.00015 42.1 3.1 38 324-368 8-52 (526)
376 2qcu_A Aerobic glycerol-3-phos 62.0 4.1 0.00014 42.0 3.0 33 324-368 4-36 (501)
377 1o94_A Tmadh, trimethylamine d 62.0 4.6 0.00016 44.1 3.5 33 324-368 390-422 (729)
378 3qvo_A NMRA family protein; st 62.0 8.7 0.0003 34.9 4.9 99 324-444 24-125 (236)
379 1ojt_A Surface protein; redox- 61.9 4.6 0.00016 41.2 3.3 32 324-367 7-38 (482)
380 2b9w_A Putative aminooxidase; 61.9 4.6 0.00016 39.8 3.2 33 324-367 7-39 (424)
381 4fk1_A Putative thioredoxin re 61.9 4.6 0.00016 38.1 3.1 32 324-367 7-38 (304)
382 3lov_A Protoporphyrinogen oxid 61.8 5.8 0.0002 39.8 4.0 36 324-369 5-40 (475)
383 2vvm_A Monoamine oxidase N; FA 61.7 4.8 0.00016 40.7 3.4 32 324-367 40-71 (495)
384 1cjc_A Protein (adrenodoxin re 61.6 5.1 0.00018 41.2 3.7 34 324-367 7-40 (460)
385 3gwf_A Cyclohexanone monooxyge 61.6 3.6 0.00012 43.3 2.6 34 324-368 9-42 (540)
386 3qy9_A DHPR, dihydrodipicolina 61.6 14 0.00048 35.4 6.5 34 324-368 4-37 (243)
387 3slg_A PBGP3 protein; structur 61.5 18 0.00061 34.8 7.3 97 322-444 23-141 (372)
388 3uko_A Alcohol dehydrogenase c 61.4 9.7 0.00033 37.6 5.5 32 324-366 195-226 (378)
389 3nyc_A D-arginine dehydrogenas 61.3 3 0.0001 39.8 1.8 32 324-368 10-41 (381)
390 1wly_A CAAR, 2-haloacrylate re 61.2 10 0.00036 36.5 5.6 51 302-367 128-179 (333)
391 2iid_A L-amino-acid oxidase; f 60.9 6.4 0.00022 39.8 4.1 32 324-367 34-65 (498)
392 3e48_A Putative nucleoside-dip 60.8 8.4 0.00029 35.7 4.7 96 325-442 2-104 (289)
393 1kyq_A Met8P, siroheme biosynt 60.8 3.8 0.00013 40.3 2.3 35 321-367 11-45 (274)
394 1rp0_A ARA6, thiazole biosynth 60.8 4.2 0.00014 38.6 2.6 34 324-368 40-73 (284)
395 3gpi_A NAD-dependent epimerase 60.7 8.4 0.00029 35.7 4.7 94 324-444 4-109 (286)
396 1v0j_A UDP-galactopyranose mut 60.5 5.3 0.00018 40.0 3.4 22 324-345 8-29 (399)
397 4gde_A UDP-galactopyranose mut 60.5 8.4 0.00029 38.7 4.9 22 324-345 11-32 (513)
398 3e1t_A Halogenase; flavoprotei 60.4 4 0.00014 42.1 2.6 33 324-368 8-40 (512)
399 2i0z_A NAD(FAD)-utilizing dehy 60.4 4.6 0.00016 40.9 3.0 33 324-368 27-59 (447)
400 1qsg_A Enoyl-[acyl-carrier-pro 60.3 4.2 0.00014 37.8 2.5 35 321-367 7-44 (265)
401 2zb4_A Prostaglandin reductase 60.1 11 0.00038 36.7 5.6 56 298-366 137-194 (357)
402 3vtz_A Glucose 1-dehydrogenase 60.0 29 0.00099 32.5 8.3 77 319-418 10-91 (269)
403 3dk9_A Grase, GR, glutathione 59.8 4.7 0.00016 40.9 3.0 33 324-368 21-53 (478)
404 3i6i_A Putative leucoanthocyan 59.5 11 0.00036 36.3 5.3 99 324-441 11-117 (346)
405 4dgk_A Phytoene dehydrogenase; 59.3 4.8 0.00016 40.6 2.9 22 324-345 2-23 (501)
406 2yy7_A L-threonine dehydrogena 59.2 7 0.00024 36.4 3.8 98 324-442 3-116 (312)
407 3l4b_C TRKA K+ channel protien 59.2 5.4 0.00018 36.2 3.0 98 325-446 2-101 (218)
408 2gqf_A Hypothetical protein HI 59.1 4.7 0.00016 40.6 2.8 33 324-368 5-37 (401)
409 1z82_A Glycerol-3-phosphate de 59.1 5.8 0.0002 38.6 3.4 99 324-449 15-116 (335)
410 3ps9_A TRNA 5-methylaminomethy 59.0 5.1 0.00017 42.9 3.2 33 324-368 273-305 (676)
411 2dpo_A L-gulonate 3-dehydrogen 59.0 5.4 0.00019 39.5 3.2 32 324-367 7-38 (319)
412 3euw_A MYO-inositol dehydrogen 58.7 21 0.00073 34.6 7.3 90 324-441 5-94 (344)
413 1ps9_A 2,4-dienoyl-COA reducta 58.7 5.2 0.00018 43.0 3.2 33 324-368 374-406 (671)
414 2yg5_A Putrescine oxidase; oxi 58.6 5.4 0.00019 39.6 3.1 33 324-368 6-38 (453)
415 4b63_A L-ornithine N5 monooxyg 58.6 5 0.00017 41.6 2.9 22 326-347 42-63 (501)
416 2v3a_A Rubredoxin reductase; a 58.2 4.8 0.00016 39.6 2.6 34 324-367 5-38 (384)
417 1f8f_A Benzyl alcohol dehydrog 58.2 15 0.00051 36.1 6.2 32 324-366 192-223 (371)
418 3pvc_A TRNA 5-methylaminomethy 58.0 4.8 0.00016 43.4 2.8 32 324-367 265-296 (689)
419 4b7c_A Probable oxidoreductase 58.0 14 0.00047 35.6 5.8 40 302-344 132-172 (336)
420 2r0c_A REBC; flavin adenine di 57.9 5.4 0.00019 41.7 3.1 32 324-367 27-58 (549)
421 4a7p_A UDP-glucose dehydrogena 57.9 12 0.00041 38.9 5.7 32 324-367 9-40 (446)
422 1dlj_A UDP-glucose dehydrogena 57.8 6.3 0.00022 40.0 3.5 30 325-367 2-31 (402)
423 2bi7_A UDP-galactopyranose mut 57.8 5.8 0.0002 39.6 3.1 33 324-368 4-36 (384)
424 2ph5_A Homospermidine synthase 57.7 12 0.00041 39.8 5.7 100 324-445 14-115 (480)
425 1fec_A Trypanothione reductase 57.7 6.8 0.00023 40.3 3.7 31 324-365 4-34 (490)
426 2ivd_A PPO, PPOX, protoporphyr 57.3 4.9 0.00017 40.2 2.5 33 324-368 17-49 (478)
427 3atr_A Conserved archaeal prot 57.3 3.1 0.00011 42.0 1.1 33 324-368 7-39 (453)
428 1piw_A Hypothetical zinc-type 57.1 16 0.00055 35.7 6.2 46 305-366 166-211 (360)
429 1gdh_A D-glycerate dehydrogena 57.1 9.7 0.00033 37.6 4.6 67 288-366 90-177 (320)
430 3two_A Mannitol dehydrogenase; 57.0 13 0.00044 36.1 5.5 33 307-343 165-197 (348)
431 3klj_A NAD(FAD)-dependent dehy 57.0 5.4 0.00019 39.9 2.8 34 324-369 10-43 (385)
432 2cf5_A Atccad5, CAD, cinnamyl 56.9 17 0.00057 35.6 6.3 35 307-344 168-202 (357)
433 3k31_A Enoyl-(acyl-carrier-pro 56.7 5.1 0.00018 38.3 2.5 35 321-367 28-65 (296)
434 2rgh_A Alpha-glycerophosphate 56.7 5.9 0.0002 41.9 3.2 33 324-368 33-65 (571)
435 2h6e_A ADH-4, D-arabinose 1-de 56.6 14 0.0005 35.8 5.7 20 324-343 172-191 (344)
436 4fs3_A Enoyl-[acyl-carrier-pro 56.5 7.2 0.00025 36.6 3.4 36 320-367 3-41 (256)
437 2wpf_A Trypanothione reductase 56.4 6.9 0.00023 40.4 3.5 31 324-365 8-38 (495)
438 1xhc_A NADH oxidase /nitrite r 56.3 6.7 0.00023 38.7 3.3 33 324-369 9-41 (367)
439 1p0f_A NADP-dependent alcohol 56.3 15 0.00051 36.1 5.8 32 324-366 193-224 (373)
440 2fzw_A Alcohol dehydrogenase c 56.2 15 0.00051 36.0 5.8 32 324-366 192-223 (373)
441 3vav_A 3-methyl-2-oxobutanoate 56.1 46 0.0016 32.9 9.2 122 101-292 20-146 (275)
442 1omo_A Alanine dehydrogenase; 56.1 17 0.0006 35.7 6.2 100 324-456 126-228 (322)
443 3da1_A Glycerol-3-phosphate de 55.9 5.2 0.00018 42.2 2.6 32 324-367 19-50 (561)
444 3dqp_A Oxidoreductase YLBE; al 55.9 12 0.00042 33.2 4.7 95 325-444 2-106 (219)
445 3hdq_A UDP-galactopyranose mut 55.9 6.7 0.00023 40.1 3.3 32 324-367 30-61 (397)
446 4b8w_A GDP-L-fucose synthase; 55.8 19 0.00066 33.0 6.2 91 322-444 5-113 (319)
447 3k6j_A Protein F01G10.3, confi 55.8 6.5 0.00022 41.3 3.3 32 324-367 55-86 (460)
448 1gte_A Dihydropyrimidine dehyd 55.7 5.9 0.0002 45.1 3.1 33 324-367 188-220 (1025)
449 3e8x_A Putative NAD-dependent 55.6 8.2 0.00028 34.8 3.6 99 318-444 16-131 (236)
450 1n2s_A DTDP-4-, DTDP-glucose o 55.5 9.6 0.00033 35.3 4.1 86 325-444 2-104 (299)
451 3o38_A Short chain dehydrogena 55.4 7.1 0.00024 36.1 3.1 36 320-367 19-56 (266)
452 2b5w_A Glucose dehydrogenase; 55.4 9 0.00031 37.5 4.0 33 324-366 174-207 (357)
453 3ew7_A LMO0794 protein; Q8Y8U8 55.3 52 0.0018 28.7 8.7 92 325-444 2-103 (221)
454 2vns_A Metalloreductase steap3 55.1 7.3 0.00025 35.7 3.1 32 324-367 29-60 (215)
455 3nks_A Protoporphyrinogen oxid 54.9 12 0.0004 37.4 4.8 35 324-368 3-37 (477)
456 2j3h_A NADP-dependent oxidored 54.8 13 0.00045 35.9 5.0 40 302-344 138-178 (345)
457 1h2b_A Alcohol dehydrogenase; 54.7 16 0.00055 35.8 5.8 33 307-343 173-207 (359)
458 3g17_A Similar to 2-dehydropan 54.6 6.6 0.00023 37.6 2.9 98 324-451 3-103 (294)
459 2x8g_A Thioredoxin glutathione 54.6 6.9 0.00024 41.1 3.2 31 324-366 108-138 (598)
460 1qor_A Quinone oxidoreductase; 54.5 18 0.00062 34.6 6.0 49 303-366 124-173 (327)
461 4f3y_A DHPR, dihydrodipicolina 54.4 35 0.0012 33.2 8.0 94 324-441 8-102 (272)
462 3enk_A UDP-glucose 4-epimerase 54.2 19 0.00067 33.9 6.1 102 324-444 6-129 (341)
463 1pjq_A CYSG, siroheme synthase 54.1 8.2 0.00028 40.0 3.7 34 321-366 10-43 (457)
464 3cmm_A Ubiquitin-activating en 54.1 7.8 0.00027 44.7 3.8 41 321-367 423-463 (1015)
465 2q1s_A Putative nucleotide sug 54.1 14 0.00048 36.0 5.2 103 321-444 30-151 (377)
466 4dna_A Probable glutathione re 54.0 6.6 0.00022 39.8 2.9 32 324-367 6-37 (463)
467 3evn_A Oxidoreductase, GFO/IDH 53.6 66 0.0023 30.9 9.9 91 324-441 6-96 (329)
468 1uuf_A YAHK, zinc-type alcohol 53.2 17 0.00059 35.9 5.7 35 305-343 181-215 (369)
469 2bka_A CC3, TAT-interacting pr 53.1 39 0.0013 30.1 7.7 97 324-444 19-132 (242)
470 1zcj_A Peroxisomal bifunctiona 53.1 6.6 0.00023 40.7 2.7 32 324-367 38-69 (463)
471 3s2e_A Zinc-containing alcohol 53.1 13 0.00044 36.0 4.7 45 306-366 154-198 (340)
472 1yqg_A Pyrroline-5-carboxylate 53.1 9.1 0.00031 35.4 3.5 32 325-367 2-33 (263)
473 2c5a_A GDP-mannose-3', 5'-epim 52.9 29 0.00099 33.8 7.2 98 324-444 30-145 (379)
474 2x5o_A UDP-N-acetylmuramoylala 52.8 5.9 0.0002 40.4 2.3 36 321-368 3-38 (439)
475 1y56_A Hypothetical protein PH 52.8 3.8 0.00013 42.2 0.9 32 324-368 109-140 (493)
476 1e3i_A Alcohol dehydrogenase, 52.7 15 0.00052 36.0 5.2 32 324-366 197-228 (376)
477 1y0p_A Fumarate reductase flav 52.6 7.6 0.00026 40.7 3.2 35 324-370 127-161 (571)
478 3ic9_A Dihydrolipoamide dehydr 52.6 6.4 0.00022 40.5 2.6 32 324-367 9-40 (492)
479 2gmh_A Electron transfer flavo 52.5 14 0.00046 39.2 5.1 36 324-367 36-73 (584)
480 4eye_A Probable oxidoreductase 52.5 12 0.0004 36.5 4.3 48 304-366 144-192 (342)
481 1v3u_A Leukotriene B4 12- hydr 52.4 16 0.00056 35.1 5.3 44 298-344 124-168 (333)
482 1vj0_A Alcohol dehydrogenase, 52.3 12 0.0004 37.1 4.3 55 297-366 173-228 (380)
483 2zcu_A Uncharacterized oxidore 52.2 6.9 0.00024 36.0 2.5 95 325-443 1-103 (286)
484 3goh_A Alcohol dehydrogenase, 52.0 19 0.00066 34.3 5.7 39 302-344 126-164 (315)
485 1qo8_A Flavocytochrome C3 fuma 52.0 9.1 0.00031 40.1 3.6 35 324-370 122-156 (566)
486 1y1p_A ARII, aldehyde reductas 52.0 46 0.0016 31.1 8.2 102 322-444 10-132 (342)
487 2bcg_G Secretory pathway GDP d 52.0 7.8 0.00027 39.3 3.0 35 324-370 12-46 (453)
488 1sez_A Protoporphyrinogen oxid 51.8 7.1 0.00024 39.5 2.7 32 324-367 14-45 (504)
489 1pj5_A N,N-dimethylglycine oxi 51.8 7.8 0.00027 42.6 3.2 35 324-369 5-39 (830)
490 2glx_A 1,5-anhydro-D-fructose 51.8 28 0.00095 33.3 6.8 89 325-441 2-91 (332)
491 4gut_A Lysine-specific histone 51.8 9.9 0.00034 42.2 4.1 34 324-369 337-370 (776)
492 2jhf_A Alcohol dehydrogenase E 51.8 16 0.00056 35.8 5.3 32 324-366 193-224 (374)
493 2x4g_A Nucleoside-diphosphate- 51.6 18 0.00062 34.1 5.4 97 324-443 14-125 (342)
494 1tt7_A YHFP; alcohol dehydroge 51.6 26 0.00089 33.6 6.5 20 325-344 153-173 (330)
495 3ruf_A WBGU; rossmann fold, UD 51.4 39 0.0013 32.0 7.7 96 324-442 26-149 (351)
496 1zej_A HBD-9, 3-hydroxyacyl-CO 51.3 8.7 0.0003 37.8 3.2 31 324-367 13-43 (293)
497 2gjc_A Thiazole biosynthetic e 51.3 9.3 0.00032 38.3 3.4 36 324-369 66-101 (326)
498 2q3e_A UDP-glucose 6-dehydroge 51.2 38 0.0013 34.9 8.1 34 324-367 6-39 (467)
499 1rjw_A ADH-HT, alcohol dehydro 51.0 16 0.00056 35.4 5.1 44 307-366 153-196 (339)
500 1iz0_A Quinone oxidoreductase; 50.6 25 0.00086 33.3 6.2 48 303-366 110-158 (302)
No 1
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=100.00 E-value=3e-167 Score=1320.98 Aligned_cols=421 Identities=43% Similarity=0.829 Sum_probs=413.8
Q ss_pred CccccccCCCCCcCCCCChHhhhccCcCCCCCCccccHHHHHHHHHHHHhccccccCCCCCCCCchhHHHHHHHhhcccc
Q 011618 31 RGTDILHDPWFNKDTGFPLTERDRLGLRGLLPPRVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNE 110 (481)
Q Consensus 31 ~G~~~l~~p~~NKgtaFt~~ER~~lgl~GLLPp~v~tle~Q~~R~~~~~~~~~~~~~~~~~~~~~l~Ky~~L~~L~~rNe 110 (481)
+|.++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|+||++++ ++|+||+||++||++||
T Consensus 2 ~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~----------~~l~k~~~L~~L~~~Ne 71 (555)
T 1gq2_A 2 KGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLT----------SDLDRYILLMSLQDRNE 71 (555)
T ss_dssp CTTHHHHCTTTCCGGGSCHHHHHHTTCTTSSCSCBCCHHHHHHHHHHHHHHCC----------CHHHHHHHHHHHHHHCH
T ss_pred ChhhhccCCcccCCCCCCHHHHHHCCCccCCCCCcCCHHHHHHHHHHHHhcCC----------CcHHHHHHHHHhcCcce
Confidence 69999999999999999999999999999999999999999999999999999 89999999999999999
Q ss_pred eeeeeeeccCcccccccccchhhHHHHHHHhhcccCCCccccccCChhhHHHHHhcCCCCCeeEEEEecCceeeccCCCC
Q 011618 111 TLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLG 190 (481)
Q Consensus 111 ~LFy~ll~~~~~e~lpiiYTPtVg~ac~~~s~~~rrprGlyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 190 (481)
+||||++++|++|+|||+||||||++|++||++||+|+|||||++|+|+++++++|||.++|+|||||||||||||||||
T Consensus 72 ~Lfy~ll~~~~~e~lpivYTP~V~~ac~~~s~i~~~p~g~yis~~d~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G 151 (555)
T 1gq2_A 72 KLFYKVLTSDIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLG 151 (555)
T ss_dssp HHHHHHHHHTHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHHTSSCSCCCEEEEECSSSCGGGCCCG
T ss_pred eeehhhHhhhHHHhcCcccCchHHHHHHHHHHHhcChhhhhcccCCHHHHHHHHhcCCCCCcEEEEEEccccccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccchhhhhhhhhcCCCCCceecEEeeccCCccccccCcccccccccCCChhhhhHhHHHHHHHHHHhC-CceEEE
Q 011618 191 VQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARW-PKAIVQ 269 (481)
Q Consensus 191 ~~Gm~I~iGKl~LY~a~gGI~P~~~LPV~LDvGTnN~~LL~Dp~YlG~r~~R~~g~~Y~~~vdefv~av~~~~-P~~~Iq 269 (481)
++||+|||||++|||+||||||++|||||||+|||||+||+||+||||||+|++|++||+|+||||++|+.+| |+++||
T Consensus 152 ~~g~~ipvGKl~Ly~~~aGIdP~~~lPI~LD~GTnn~~LL~DplYlG~r~~Rv~g~eyd~fvdefv~av~~~fGp~~~I~ 231 (555)
T 1gq2_A 152 CYGMGIPVGKLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQ 231 (555)
T ss_dssp GGGGHHHHHHHHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCTHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred CCccccchhHHHHhHhccCCChhheeeeEeecCCCchhhcCCCccCCcCCCCCchHHHHHHHHHHHHHHHHhhCCCcEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 899999
Q ss_pred eecCCCchHHHHHHHHhhcCCccccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHH
Q 011618 270 FEDFQMKWAFETLERYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARM 349 (481)
Q Consensus 270 fEDf~~~naf~iL~ryr~~~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~ 349 (481)
||||+++|||+||+|||++||||||||||||+|+||||+||+|++|++|+| |||||+|||+||+|||+||+++|+ +
T Consensus 232 ~EDf~~~~af~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d---~riv~~GAGaAg~gia~ll~~~~~-~ 307 (555)
T 1gq2_A 232 FEDFANANAFRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSD---HTVLFQGAGEAALGIANLIVMAMQ-K 307 (555)
T ss_dssp ECSCCHHHHHHHHHHHTTTSEEEETTTHHHHHHHHHHHHHHHHHHTSCGGG---CCEEEECCSHHHHHHHHHHHHHHH-H
T ss_pred ecccCCccHHHHHHHHhccCCEecCccchHHHHHHHHHHHHHHHhCCChhh---cEEEEECCCHHHHHHHHHHHHHHH-H
Confidence 999999999999999999999999999999999999999999999999999 999999999999999999999999 6
Q ss_pred cCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHH
Q 011618 350 AGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKA 429 (481)
Q Consensus 350 ~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~ 429 (481)
+|+|+|||++||||||++|||+++|++|+++|++||+++++ .++|+|||+++|||||||+|++||+||+|||++
T Consensus 308 ~G~~~eeA~~~i~~~D~~Gli~~~r~~l~~~k~~~A~~~~~------~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~ 381 (555)
T 1gq2_A 308 EGVSKEEAIKRIWMVDSKGLIVKGRASLTPEKEHFAHEHCE------MKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQD 381 (555)
T ss_dssp HTCCHHHHHTTEEEEETTEECBTTCSSCCTTGGGGCBSCCC------CCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHH
T ss_pred cCCChHHHhCcEEEEECCCeeeCCCCCchHHHHHHHhhcCC------CCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHH
Confidence 79999999999999999999999998899999999998742 358999999999999999999999999999999
Q ss_pred hhhcCCCCCEEEecCCCCCCCCCCCCHHHHHhcccCCccccccCce
Q 011618 430 MRESDSVKPAIFAMSNPTMNGLFSCCVTTFFFYLMAARSSFLTSSF 475 (481)
Q Consensus 430 Ma~~~~erPIIFaLSNPt~~aE~~~t~eda~~wt~g~r~~f~~~~~ 475 (481)
|++ +|+|||||||||||+++| |+||||++||+| |++|+|||+
T Consensus 382 Ma~-~~~~PIIFaLSNPt~~aE--~~pe~a~~~t~G-~aivATGsp 423 (555)
T 1gq2_A 382 MAA-FNKRPIIFALSNPTSKAE--CTAEQLYKYTEG-RGIFASGSP 423 (555)
T ss_dssp HHH-HCSSCEEEECCSSGGGCS--SCHHHHHHHTTT-CCEEEESSC
T ss_pred HHh-cCCCCEEEECCCCCCccC--cCHHHHHHhccC-CEEEEeCCC
Confidence 985 999999999999999999 999999999996 999999997
No 2
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=100.00 E-value=1.1e-166 Score=1319.87 Aligned_cols=424 Identities=41% Similarity=0.780 Sum_probs=415.4
Q ss_pred cCccccccCCCCCcCCCCChHhhhccCcCCCCCCccccHHHHHHHHHHHHhccccccCCCCCCCCchhHHHHHHHhhccc
Q 011618 30 KRGTDILHDPWFNKDTGFPLTERDRLGLRGLLPPRVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRN 109 (481)
Q Consensus 30 ~~G~~~l~~p~~NKgtaFt~~ER~~lgl~GLLPp~v~tle~Q~~R~~~~~~~~~~~~~~~~~~~~~l~Ky~~L~~L~~rN 109 (481)
.+|.++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|+||++++ ++|+||+||++||++|
T Consensus 3 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~----------~~l~k~~~L~~L~~~N 72 (564)
T 1pj3_A 3 EKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMT----------SPLEKYIYIMGIQERN 72 (564)
T ss_dssp CCSTHHHHSTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHCC----------SHHHHHHHHHHHHTTC
T ss_pred CchHHHhCCCcccCCCCCCHHHHHhCCCCcCCCCCcCCHHHHHHHHHHHHhcCC----------CcHHHHHHHHHhhccc
Confidence 579999999999999999999999999999999999999999999999999999 8999999999999999
Q ss_pred ceeeeeeeccCcccccccccchhhHHHHHHHhhcccCCCccccccCChhhHHHHHhcCCCCCeeEEEEecCceeeccCCC
Q 011618 110 ETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDL 189 (481)
Q Consensus 110 e~LFy~ll~~~~~e~lpiiYTPtVg~ac~~~s~~~rrprGlyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDl 189 (481)
|+||||++.+|++|+|||+||||||++|++||++||+|+|+|||++|+++++++++|||.++|+||||||||||||||||
T Consensus 73 e~Lfy~ll~~~~~e~lpivYTP~Vg~ac~~~s~i~~~p~g~ylsi~d~~~i~~~l~n~~~~~v~v~VVTDG~~ILGLGD~ 152 (564)
T 1pj3_A 73 EKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDL 152 (564)
T ss_dssp HHHHHHHHHHCHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHTTCSCSCCCEEEEECSSSCTTSCCC
T ss_pred ceeehhhhhhCHHHhCCeeeCccHHHHHHHHHHHhcCcccccccccCHHHHHHHHHhCCCCCceEEEEEcccccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccchhhhhhhhhcCCCCCceecEEeeccCCccccccCcccccccccCCChhhhhHhHHHHHHHHHHhC-CceEE
Q 011618 190 GVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARW-PKAIV 268 (481)
Q Consensus 190 G~~Gm~I~iGKl~LY~a~gGI~P~~~LPV~LDvGTnN~~LL~Dp~YlG~r~~R~~g~~Y~~~vdefv~av~~~~-P~~~I 268 (481)
|++||+|||||++|||+||||||++|||||||+||||++||+||+||||||+|++|++||+|+||||++|+.+| |+++|
T Consensus 153 G~~gm~ipvGKl~Ly~~~aGIdP~~~lPI~lDvgTnn~~LL~DPlYlG~r~~Rv~g~eYd~fvdefv~av~~~fG~~~~I 232 (564)
T 1pj3_A 153 GVYGMGIPVGKLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLI 232 (564)
T ss_dssp GGGGGHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCTTGGGCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred CCCcccceehHHHHHHhccCCChhheeeeEeecCcCchhhccCCcccCcCCCCCchhhHHHHHHHHHHHHHHHcCCCcEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 89999
Q ss_pred EeecCCCchHHHHHHHHhhcCCccccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHH
Q 011618 269 QFEDFQMKWAFETLERYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAAR 348 (481)
Q Consensus 269 qfEDf~~~naf~iL~ryr~~~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~ 348 (481)
|||||+++|||+||+|||++||||||||||||+|+||||+||+|++|++|+| |||||+|||+||+|||+||+++|+
T Consensus 233 ~~EDf~~~~af~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d---~riv~~GAGaAgigia~ll~~~m~- 308 (564)
T 1pj3_A 233 QFEDFGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISE---HKILFLGAGEAALGIANLIVMSMV- 308 (564)
T ss_dssp EECSCCHHHHHHHHHHHTTTSSEEEHHHHHHHHHHHHHHHHHHHHHCCCGGG---CCEEEECCSHHHHHHHHHHHHHHH-
T ss_pred eehhcCCccHHHHHHHhccCCCEeCCCCchHHHHHHHHHHHHHHHhCCcHhH---cEEEEeCCCHHHHHHHHHHHHHHH-
Confidence 9999999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HcCCChhhhcCeEEEEeccceeecCC-CCCChhhhccccccCCcCCcCCCCCHHHHhcccCCcEEEeecCCCCCCCHHHH
Q 011618 349 MAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVL 427 (481)
Q Consensus 349 ~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv 427 (481)
++|+|+|||++||||||++|||+++| ++|+++|++||++++++ ..++|+|||+++|||||||+|++||+||+|||
T Consensus 309 ~~Gl~~eeA~~~i~~~D~~Gli~~~r~~~l~~~k~~~A~~~~~~----~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv 384 (564)
T 1pj3_A 309 ENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPES----IPDTFEDAVNILKPSTIIGVAGAGRLFTPDVI 384 (564)
T ss_dssp HTTCCHHHHHHTEEEEETTEECBTTCSSCCCTTTGGGCBCCCSS----CCSSHHHHHHHHCCSEEEECCCSSCCSCHHHH
T ss_pred HcCCChHHhhCcEEEEeCCCeEECCCcccchHHHHHHHHhcCcc----ccCCHHHHHhhcCCCEEEEeCCCCCCCCHHHH
Confidence 68999999999999999999999999 78999999999987642 13689999999999999999999999999999
Q ss_pred HHhhhcCCCCCEEEecCCCCCCCCCCCCHHHHHhcccCCccccccCce
Q 011618 428 KAMRESDSVKPAIFAMSNPTMNGLFSCCVTTFFFYLMAARSSFLTSSF 475 (481)
Q Consensus 428 ~~Ma~~~~erPIIFaLSNPt~~aE~~~t~eda~~wt~g~r~~f~~~~~ 475 (481)
++|++ +|+|||||||||||+++| |+||||++||+| |++|+|||+
T Consensus 385 ~~Ma~-~~~~PIIFaLSNPt~~aE--~~pe~a~~~t~G-~aivATGsp 428 (564)
T 1pj3_A 385 RAMAS-INERPVIFALSNPTAQAE--CTAEEAYTLTEG-RCLFASGSP 428 (564)
T ss_dssp HHHHH-HCSSCEEEECCSSGGGCS--CCHHHHHHHTTT-CCEEEESSC
T ss_pred HHHHh-cCCCCEEEECCCCCCccC--cCHHHHHhhccC-CEEEEeCCC
Confidence 99985 999999999999999999 999999999996 999999996
No 3
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=100.00 E-value=1.8e-166 Score=1322.29 Aligned_cols=429 Identities=44% Similarity=0.801 Sum_probs=418.9
Q ss_pred CCceeeccCccccccCCCCCcCCCCChHhhhccCcCCCCCCccccHHHHHHHHHHHHhccccccCCCCCCCCchhHHHHH
Q 011618 23 PGPCMVHKRGTDILHDPWFNKDTGFPLTERDRLGLRGLLPPRVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRIL 102 (481)
Q Consensus 23 ~~~~~~~~~G~~~l~~p~~NKgtaFt~~ER~~lgl~GLLPp~v~tle~Q~~R~~~~~~~~~~~~~~~~~~~~~l~Ky~~L 102 (481)
..++.+..+|.++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++ ++|+||+||
T Consensus 30 ~~~~~~~~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~r~~~~~~~~~----------~~l~k~~~L 99 (605)
T 1o0s_A 30 PERVTPKKRSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQP----------NDLARYIQL 99 (605)
T ss_dssp CCCCCCSCCHHHHHTCTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHSS----------SHHHHHHHH
T ss_pred CCccccCcchHHHhCCCcccCCCCCCHHHHHHCCCCcCCCCCcCCHHHHHHHHHHHHHcCC----------CcHHHHHHH
Confidence 3445567799999999999999999999999999999999999999999999999999999 899999999
Q ss_pred HHhhcccceeeeeeeccCcccccccccchhhHHHHHHHhhcccCCCccccccCCh--hhHHHHHhcCCCCCeeEEEEecC
Q 011618 103 NRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDK--GEMMSMIYNWPAQQVDMIVLTDG 180 (481)
Q Consensus 103 ~~L~~rNe~LFy~ll~~~~~e~lpiiYTPtVg~ac~~~s~~~rrprGlyis~~d~--g~i~~~l~nwp~~~v~viVVTDG 180 (481)
++||++||+||||++++|++|+|||+||||||++|++||++||+|+|+|||++|+ |+++++++|||.++|+|||||||
T Consensus 100 ~~L~~~Ne~Lfyrll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~g~yis~~d~~~~~i~~~l~n~~~~~~~v~VVTDG 179 (605)
T 1o0s_A 100 DGLQDRNEKLFYRVVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTDG 179 (605)
T ss_dssp HHHHHHCHHHHHHHHHHTHHHHHHHHSTTHHHHHHHHHCSCCCCCCSEEEEGGGCSHHHHHHHHTTSSCSCCCEEEEECS
T ss_pred HHhhcccchhhhhhhhhCHHHhCCeeeCccHHHHHHHHHHHhcChHhhhccccCcccchHHHHHhcCCCCCceEEEEEcc
Confidence 9999999999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred ceeeccCCCCCccccccchhhhhhhhhcCCCCCceecEEeeccCCccccccCcccccccccCCChhhhhHhHHHHHHHHH
Q 011618 181 SRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVH 260 (481)
Q Consensus 181 ~rILGLGDlG~~Gm~I~iGKl~LY~a~gGI~P~~~LPV~LDvGTnN~~LL~Dp~YlG~r~~R~~g~~Y~~~vdefv~av~ 260 (481)
||||||||||++||+|||||++|||+||||||++|||||||+|||||+||+||+||||||+|++|++||+|+||||++|+
T Consensus 180 ~~ILGLGD~G~~g~~ipvGKl~Ly~~~aGIdP~~~lPI~LDvGTnne~LL~DPlYlG~r~~Rv~g~~Yd~fvdefv~av~ 259 (605)
T 1o0s_A 180 ERILGLGDLGAYGIGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACT 259 (605)
T ss_dssp SCBTTTBCCGGGGGHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCSHHHHHHHHHHHHHHH
T ss_pred ccceecCCCCCCcCcceeeHHHHHHhccCCChhheeeeEeccCCChhhhccCCcccCcCCCCCChHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhC-CceEEEeecCCCchHHHHHHHHhhcCCccccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHH
Q 011618 261 ARW-PKAIVQFEDFQMKWAFETLERYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVL 339 (481)
Q Consensus 261 ~~~-P~~~IqfEDf~~~naf~iL~ryr~~~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA 339 (481)
.+| |+++||||||+++|||+||+|||++||||||||||||+|+||||+||+|++|++|+| |||||+|||+||+|||
T Consensus 260 ~~fGp~~~I~~EDf~~p~af~il~ryr~~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d---~riv~~GAGaAgigia 336 (605)
T 1o0s_A 260 KKYGQKTLIQFEDFANPNAFRLLDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQ---EKYLFFGAGAASTGIA 336 (605)
T ss_dssp HHHCTTCEEEECSCCHHHHHHHHHHHTTTSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGG---CCEEEECCSHHHHHHH
T ss_pred HHhCCCcEeeHhhcCCccHHHHHHHhccCCCeeCcccchHHHHHHHHHHHHHHHhCCChhh---cEEEEECCCHHHHHHH
Confidence 999 999999999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHHhcccCCcEEEeecCCC
Q 011618 340 KMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVG 419 (481)
Q Consensus 340 ~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~ 419 (481)
+||+++|+ ++|+|+|||++||||||++|||+++|++|+++|++||+++++ .++|+|||+++|||||||+|++|
T Consensus 337 ~ll~~~m~-~~Gl~~eeA~~~i~~vD~~Gli~~~r~~l~~~k~~~A~~~~~------~~~L~eav~~vkpdVlIG~S~~~ 409 (605)
T 1o0s_A 337 EMIVHQMQ-NEGISKEEACNRIYLMDIDGLVTKNRKEMNPRHVQFAKDMPE------TTSILEVIRAARPGALIGASTVR 409 (605)
T ss_dssp HHHHHHHH-TTTCCHHHHHHTEEEEETTEECBTTCSSCCGGGTTTCBSSCC------CCCHHHHHHHHCCSEEEECSSCT
T ss_pred HHHHHHHH-HcCCChhhhhCeEEEEECCCceeCCCCCchHHHHHHHhhcCC------CCCHHHHHhhcCCCEEEEecCCC
Confidence 99999999 789999999999999999999999998999999999998642 35899999999999999999999
Q ss_pred CCCCHHHHHHhhhcCCCCCEEEecCCCCCCCCCCCCHHHHHhcccCCccccccCce
Q 011618 420 GVFNEEVLKAMRESDSVKPAIFAMSNPTMNGLFSCCVTTFFFYLMAARSSFLTSSF 475 (481)
Q Consensus 420 g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~~~t~eda~~wt~g~r~~f~~~~~ 475 (481)
|+||+|||++||+ +|+|||||||||||+++| |+||||++||+| |++|+|||+
T Consensus 410 g~ft~evv~~Ma~-~~~~PIIFaLSNPt~~aE--~~pe~a~~~t~G-~aivATGsp 461 (605)
T 1o0s_A 410 GAFNEEVIRAMAE-INERPIIFALSNPTSKAE--CTAEEAYTFTNG-AALYASGSP 461 (605)
T ss_dssp TCSCHHHHHHHHH-HCSSCEEEECCSSGGGCS--SCHHHHHHTTTS-CCEEEESSC
T ss_pred CCCCHHHHHHHHh-cCCCCEEEECCCCCCCcC--cCHHHHHhhccC-CEEEEECCC
Confidence 9999999999985 999999999999999999 999999999996 999999997
No 4
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=100.00 E-value=6.8e-96 Score=764.31 Aligned_cols=297 Identities=24% Similarity=0.333 Sum_probs=272.7
Q ss_pred hcccceeeeeeeccCcccccccccchhhHHHHHHHhhcccCCCccccccCChhhHHHHHhcCCCCCeeEEEEecCceeec
Q 011618 106 HDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILG 185 (481)
Q Consensus 106 ~~rNe~LFy~ll~~~~~e~lpiiYTPtVg~ac~~~s~~~rrprGlyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILG 185 (481)
..+-++. -++.+++.++ ||++||||||++|++|+ +|++++++++.+| ++||||||||||||
T Consensus 44 ~GKi~v~-~~~~~~~~~d-LslaYTPgVa~~c~~i~-------------~dp~~~~~yt~kg----n~VaVVTDG~aILG 104 (487)
T 3nv9_A 44 KGKIQIM-PKCTLAGFNW-FNAYYTPGVSRISTNIR-------------DNNDSSLFYSLRG----NFVGVVSDSTRVLG 104 (487)
T ss_dssp TSSEEEE-ECSCCSSGGG-HHHHSTTTHHHHHHHHH-------------HCGGGHHHHSGGG----GEEEEEECSSSBGG
T ss_pred CCeEEEE-ecCCCCCHHH-CeeeeCcchHHHHHHHH-------------hChHHHhhhcccC----CEEEEEEcCceeee
Confidence 6777775 8999999999 69999999999999998 7899999988877 58999999999999
Q ss_pred cCCCCC-ccccccchhhhhhhhhcCCCCCceecEEeeccCCccccccCcccccccccCCChhhhhHhHHHHHHHHHHhCC
Q 011618 186 LGDLGV-QGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWP 264 (481)
Q Consensus 186 LGDlG~-~Gm~I~iGKl~LY~a~gGI~P~~~LPV~LDvGTnN~~LL~Dp~YlG~r~~R~~g~~Y~~~vdefv~av~~~~P 264 (481)
|||||+ +||||||||++|||+||||| |||||||+||+| +++| +||||++|+.+||
T Consensus 105 LGDiG~~agmpImeGKl~Lyk~~aGId---~lPI~LD~gt~~--~~~d-------------------~defve~v~~~~P 160 (487)
T 3nv9_A 105 DGDVTPPGGLGVMEGKALLMKYLGGID---AVPICIDSKNKE--GKND-------------------PDAVIEFVQRIQH 160 (487)
T ss_dssp GBCCCGGGGHHHHHHHHHHHHHHHCCE---EEEEECCCBCTT--SCBC-------------------HHHHHHHHHHHGG
T ss_pred ccccccccCCchhhhHHHHHHhcCCCc---eeeeEEeCCCcc--ccCC-------------------HHHHHHHHHHhCC
Confidence 999999 79999999999999999999 999999999876 4577 5999999999999
Q ss_pred ce-EEEeecCCCchHHHHHHHHhh--cCCccccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHH
Q 011618 265 KA-IVQFEDFQMKWAFETLERYRK--RFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKM 341 (481)
Q Consensus 265 ~~-~IqfEDf~~~naf~iL~ryr~--~~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~l 341 (481)
++ +||||||++||||+||+|||+ +||||||||||||+|+||||+||+|++|++|+| |||||+|||+||+|||+|
T Consensus 161 ~fG~InlEDf~ap~af~il~ryr~~~~ipvFnDD~qGTA~V~lAgllnAlki~gk~l~d---~riV~~GAGaAGigia~l 237 (487)
T 3nv9_A 161 TFGAINLEDISQPNCYKILDVLRESCDIPVWHDDQQGTASVTLAGLLNALKLVKKDIHE---CRMVFIGAGSSNTTCLRL 237 (487)
T ss_dssp GCSEEEECSCCTTHHHHHHHHHHHHCSSCEEETTTHHHHHHHHHHHHHHHHHHTCCGGG---CCEEEECCSHHHHHHHHH
T ss_pred CCCeecHhhcCCchHHHHHHHHHhhccCCccccccchHHHHHHHHHHHHHHHhCCChhh---cEEEEECCCHHHHHHHHH
Confidence 98 999999999999999999999 589999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCC-----hhhhccccccCCcCCcCCCCCHHHHhcccCCcEEEeec
Q 011618 342 AVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLD-----PAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS 416 (481)
Q Consensus 342 l~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~-----~~k~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S 416 (481)
|+. .|+|+ +||||||++|||+++|++|+ ++|.+||+.+++ ....+|+|||++ +|||||+|
T Consensus 238 l~~-----~G~~~----~~i~l~D~~Gli~~~R~~l~~~~~~~~k~~~A~~~n~----~~~~~L~eav~~--adVlIG~S 302 (487)
T 3nv9_A 238 IVT-----AGADP----KKIVMFDSKGSLHNGREDIKKDTRFYRKWEICETTNP----SKFGSIAEACVG--ADVLISLS 302 (487)
T ss_dssp HHH-----TTCCG----GGEEEEETTEECCTTCHHHHHCGGGHHHHHHHHHSCT----TCCCSHHHHHTT--CSEEEECC
T ss_pred HHH-----cCCCc----ccEEEEeccccccCCcchhhhhcccHHHHHHHHhccc----ccCCCHHHHHhc--CCEEEEec
Confidence 974 58886 89999999999999997774 466788887642 145789999999 79999999
Q ss_pred CC-CCCCCHHHHHHhhhcCCCCCEEEecCCCCCCCCCCCCHHHHHhcccCCccccccCc
Q 011618 417 GV-GGVFNEEVLKAMRESDSVKPAIFAMSNPTMNGLFSCCVTTFFFYLMAARSSFLTSS 474 (481)
Q Consensus 417 ~~-~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~~~t~eda~~wt~g~r~~f~~~~ 474 (481)
++ ||+||+|+|++|+ +|||||||||||| | |+||||+++ ||++|+||+
T Consensus 303 ~~~pg~ft~e~V~~Ma----~~PIIFaLSNPtp--E--i~pe~A~~~---G~aIvATGr 350 (487)
T 3nv9_A 303 TPGPGVVKAEWIKSMG----EKPIVFCCANPVP--E--IYPYEAKEA---GAYIVATGR 350 (487)
T ss_dssp CSSCCCCCHHHHHTSC----SSCEEEECCSSSC--S--SCHHHHHHT---TCSEEEESC
T ss_pred ccCCCCCCHHHHHhhc----CCCEEEECCCCCc--c--CCHHHHHHh---CCEEEEECC
Confidence 76 8999999999995 7999999999998 9 999999984 488888885
No 5
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=100.00 E-value=1.4e-89 Score=707.89 Aligned_cols=290 Identities=30% Similarity=0.440 Sum_probs=264.9
Q ss_pred hcccceeeeeeeccCcccccccccchhhHHHHHHHhhcccCCCccccccCChhhHHHHHhcCCCCCeeEEEEecCceeec
Q 011618 106 HDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILG 185 (481)
Q Consensus 106 ~~rNe~LFy~ll~~~~~e~lpiiYTPtVg~ac~~~s~~~rrprGlyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILG 185 (481)
..+-+. ++++.+++.++ |||+||||||++|++|+ +|+++++ +|+.++++|+|||||+||||
T Consensus 19 ~gk~~~-~~~~~~~~~~~-l~i~YtP~V~~~c~~i~-------------~~p~~v~----~~t~~~~~V~VvTdG~~iLG 79 (398)
T 2a9f_A 19 GGKLEV-QPKVDIKTKHD-LSIAYTPGVASVSSAIA-------------KDKTLAY----DLTTKKNTVAVISDGTAVLG 79 (398)
T ss_dssp TSSEEE-EESSCCSSHHH-HHHHSTTTTHHHHHHHH-------------HCGGGHH----HHSGGGTEEEEEECSSSCTT
T ss_pred CCeEEE-EEecccCCHHH-CeEEECchHHHHHHHHH-------------hCHHHHH----HhcccCCEEEEEECCccccC
Confidence 566554 69999999877 69999999999999998 4788776 57778899999999999999
Q ss_pred cCCCCCc-cccccchhhhhhhhhcCCCCCceecEEeeccCCccccccCcccccccccCCChhhhhHhHHHHHHHHHHhCC
Q 011618 186 LGDLGVQ-GIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWP 264 (481)
Q Consensus 186 LGDlG~~-Gm~I~iGKl~LY~a~gGI~P~~~LPV~LDvGTnN~~LL~Dp~YlG~r~~R~~g~~Y~~~vdefv~av~~~~P 264 (481)
|||+|++ |||||+||+.||++||||| ++|||||+|| +||||++|+.+||
T Consensus 80 LGD~G~~aG~pI~eGK~~Lf~~~agid---~~pi~Ldv~~---------------------------~dEfv~~v~~~~p 129 (398)
T 2a9f_A 80 LGDIGPEAAMPVMEGKAALFKAFAGVD---AIPIVLDTKD---------------------------TEEIISIVKALAP 129 (398)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHSSCE---EEEEECCCCC---------------------------HHHHHHHHHHHGG
T ss_pred CCCcccccCCcchhCHHHHHHhccCCc---eeeeEeCCCC---------------------------HHHHHHHHHHcCC
Confidence 9999996 9999999999999999999 9999999985 7999999999999
Q ss_pred c-eEEEeecCCCchHHHHHHHHhhc--CCccccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHH
Q 011618 265 K-AIVQFEDFQMKWAFETLERYRKR--FCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKM 341 (481)
Q Consensus 265 ~-~~IqfEDf~~~naf~iL~ryr~~--~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~l 341 (481)
+ .+||||||+++|||++|+|||++ +|||||||||||+|+|||++||+|++|++++| +||||+|||+||+|||++
T Consensus 130 ~F~~I~lED~~~p~~f~il~~~r~~~~ipvf~DDiqGTa~V~lAall~al~l~g~~l~d---~kVVi~GAGaAG~~iA~l 206 (398)
T 2a9f_A 130 TFGGINLEDISAPRCFEIEQRLIKECHIPVFHDDQHGTAIVVLAAIFNSLKLLKKSLDE---VSIVVNGGGSAGLSITRK 206 (398)
T ss_dssp GCSEEEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHTTTCCTTS---CEEEEECCSHHHHHHHHH
T ss_pred ceeEeccccCCChHHHHHHHHhhhcCCcceecchhhhHHHHHHHHHHHHHHHhCCCCCc---cEEEEECCCHHHHHHHHH
Confidence 9 59999999999999999999997 99999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHcCCChhhhcCeEEEEeccceeecCC-CCCChhhhccccccCCcCCcCCCCCHHHHhcccCCcEEEeecCCCC
Q 011618 342 AVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGG 420 (481)
Q Consensus 342 l~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g 420 (481)
++.+ |. ++|||+|++|||+++| ++|+++|++||++++.. ....+|+|+|++ +|+|||+|+ ||
T Consensus 207 l~~~-----Ga------~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~---~~~~~L~eav~~--ADV~IG~Sa-pg 269 (398)
T 2a9f_A 207 LLAA-----GA------TKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNRE---FKSGTLEDALEG--ADIFIGVSA-PG 269 (398)
T ss_dssp HHHH-----TC------CEEEEEETTEECCTTCCCSCCC---CHHHHHSCT---TCCCSCSHHHHT--TCSEEECCS-TT
T ss_pred HHHc-----CC------CeEEEEECCCcccCCccccchHHHHHHhhccCcc---cchhhHHHHhcc--CCEEEecCC-CC
Confidence 9975 53 7999999999999999 88999999999986542 235789999999 899999998 99
Q ss_pred CCCHHHHHHhhhcCCCCCEEEecCCCCCCCCCCCCHHHHHhcccCCccccccCce
Q 011618 421 VFNEEVLKAMRESDSVKPAIFAMSNPTMNGLFSCCVTTFFFYLMAARSSFLTSSF 475 (481)
Q Consensus 421 ~Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~~~t~eda~~wt~g~r~~f~~~~~ 475 (481)
+||+|+|++|+ ++||||||||||+ | |+||||++| ||++|+||+.
T Consensus 270 l~T~EmVk~Ma----~~pIIfalsNPt~--E--~~pe~a~~~---g~~i~atGrs 313 (398)
T 2a9f_A 270 VLKAEWISKMA----ARPVIFAMANPIP--E--IYPDEALEA---GAYIVGTGRS 313 (398)
T ss_dssp CCCHHHHHTSC----SSCEEEECCSSSC--S--SCHHHHHTT---TCSEEEESCT
T ss_pred CCCHHHHHhhC----CCCEEEECCCCCc--c--CCHHHHHHh---CCeEEEeCCC
Confidence 99999999995 7999999999997 9 999999999 4788888753
No 6
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=100.00 E-value=1.6e-85 Score=676.34 Aligned_cols=292 Identities=24% Similarity=0.361 Sum_probs=267.5
Q ss_pred HhhcccceeeeeeeccCcccccccccchhhHHHHHHHhhcccCCCccccccCChhhHHHHHhcCCCCCeeEEEEecCcee
Q 011618 104 RLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRI 183 (481)
Q Consensus 104 ~L~~rNe~LFy~ll~~~~~e~lpiiYTPtVg~ac~~~s~~~rrprGlyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rI 183 (481)
..+.+-+. ++++.+++.++ |||+||||||++|++|+ .|+++++ +|+.++++|+||||||||
T Consensus 21 ~~~gk~~~-~~~~~~~~~~~-l~i~YtP~V~~~c~~~~-------------~~p~~v~----~~t~~~~~V~VvTdg~~v 81 (388)
T 1vl6_A 21 FLKGKIRT-ALPVEKVDRET-LSLLYTPGVADVARACA-------------EDPEKTY----VYTSRWNTVAVVSDGSAV 81 (388)
T ss_dssp HHTCSCEE-ECSCSCCCHHH-HHHHSTTTHHHHHHHHH-------------HCGGGHH----HHSGGGGEEEEEECSTTB
T ss_pred cCCCeEEE-EEeeecCCHHH-CeEEECchHHHHHHHHH-------------hCHHHHH----hhcccCCeEEEEECCccc
Confidence 34566554 69999999988 69999999999999998 3777666 577788999999999999
Q ss_pred eccCCCCCc-cccccchhhhhhhhhcCCCCCceecEEeeccCCccccccCcccccccccCCChhhhhHhHHHHHHHHHHh
Q 011618 184 LGLGDLGVQ-GIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHAR 262 (481)
Q Consensus 184 LGLGDlG~~-Gm~I~iGKl~LY~a~gGI~P~~~LPV~LDvGTnN~~LL~Dp~YlG~r~~R~~g~~Y~~~vdefv~av~~~ 262 (481)
|||||+|++ |||||+||++||++||||| ++|||||+|| +||||++|+++
T Consensus 82 LGlGD~G~~ag~pI~egK~~Lf~~~agid---~~pi~ldv~~---------------------------~dE~v~~vk~~ 131 (388)
T 1vl6_A 82 LGLGNIGPYGALPVMEGKAFLFKAFADID---AFPICLSESE---------------------------EEKIISIVKSL 131 (388)
T ss_dssp TTTBSCCHHHHHHHHHHHHHHHHHHHCCE---EEEEECSCCC---------------------------HHHHHHHHHHT
T ss_pred cCCCccccccCCcchhCHHHHHHhccCCc---eEeEEeCCCC---------------------------HHHHHHHHHHc
Confidence 999999996 9999999999999999999 9999999985 79999999999
Q ss_pred CCc-eEEEeecCCCchHHHHHHHHhhc--CCccccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHH
Q 011618 263 WPK-AIVQFEDFQMKWAFETLERYRKR--FCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVL 339 (481)
Q Consensus 263 ~P~-~~IqfEDf~~~naf~iL~ryr~~--~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA 339 (481)
||+ ..||||||+++|||++|+|||++ ||||||||||||+|++||+++|+|++|++++| +||||+|||+||++||
T Consensus 132 ~p~f~~i~lED~~~p~af~il~r~r~~~~Ipvf~DDiqGTasV~lAal~~A~~i~g~~l~~---~kVVv~GAGaAG~~iA 208 (388)
T 1vl6_A 132 EPSFGGINLEDIGAPKCFRILQRLSEEMNIPVFHDDQQGTAVVVSAAFLNALKLTEKKIEE---VKVVVNGIGAAGYNIV 208 (388)
T ss_dssp GGGCSEEEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTT---CEEEEECCSHHHHHHH
T ss_pred CCcceEeCHhhcCCHHHHHHHHHhhhhcCcceeccccccHHHHHHHHHHHHHHHhCCCCCC---cEEEEECCCHHHHHHH
Confidence 999 59999999999999999999997 99999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCC--CChhhhccccccCCcCCcCCCCCHHHHhcccCCcEEEeecC
Q 011618 340 KMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKN--LDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG 417 (481)
Q Consensus 340 ~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~--l~~~k~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~ 417 (481)
++++.+ | .++||++|++|||+.+|.+ |+++|++||++.+.. ....+|+|+|+. +|+|||+|+
T Consensus 209 kll~~~-----G------~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~---~~~~~L~eav~~--ADVlIG~Sa 272 (388)
T 1vl6_A 209 KFLLDL-----G------VKNVVAVDRKGILNENDPETCLNEYHLEIARITNPE---RLSGDLETALEG--ADFFIGVSR 272 (388)
T ss_dssp HHHHHH-----T------CCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTT---CCCSCHHHHHTT--CSEEEECSC
T ss_pred HHHHhC-----C------CCeEEEEECCCcccCCCcccccCHHHHHHHHhhhcc---CchhhHHHHHcc--CCEEEEeCC
Confidence 999875 4 2799999999999999976 999999999986532 235789999999 899999999
Q ss_pred CCCCCCHHHHHHhhhcCCCCCEEEecCCCCCCCCCCCCHHHHHhcccCCccccccCce
Q 011618 418 VGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNGLFSCCVTTFFFYLMAARSSFLTSSF 475 (481)
Q Consensus 418 ~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~~~t~eda~~wt~g~r~~f~~~~~ 475 (481)
||+||+|+|++|+ ++||||+|||||+ | |+||||++| ||++|+||+.
T Consensus 273 -p~l~t~emVk~Ma----~~pIIfalSNPt~--E--~~p~~a~~~---g~~i~atGr~ 318 (388)
T 1vl6_A 273 -GNILKPEWIKKMS----RKPVIFALANPVP--E--IDPELAREA---GAFIVATGRS 318 (388)
T ss_dssp -SSCSCHHHHTTSC----SSCEEEECCSSSC--S--SCHHHHHHT---TCSEEEESCT
T ss_pred -CCccCHHHHHhcC----CCCEEEEcCCCCC--C--CCHHHHHHh---cCeEEEeCCC
Confidence 8999999999995 7999999999997 9 999999999 4788888753
No 7
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=100.00 E-value=1.1e-61 Score=506.46 Aligned_cols=286 Identities=26% Similarity=0.453 Sum_probs=255.9
Q ss_pred eeeeeeccCcccccccccchhhHHHHHHHhhcccCCCccccccCChhhHHHHHhcCCCCCeeEEEEecCceeeccCCCCC
Q 011618 112 LYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGV 191 (481)
Q Consensus 112 LFy~ll~~~~~e~lpiiYTPtVg~ac~~~s~~~rrprGlyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~ 191 (481)
.++++.+++.++ |||+||||||++|++|+ +|++++++ |+.++|+++|||||+|||||||+|.
T Consensus 22 ~~~~~~~~~~~~-l~~~YtP~v~~~c~~~~-------------~~~~~~~~----~~~~~~~v~vvtdgt~ilGlG~iG~ 83 (439)
T 2dvm_A 22 VIPKVSLESREE-LTLAYTPGVAEPCKEIA-------------RDPGKVYE----YTSKGNLVAVVSDGSRILGLGNIGP 83 (439)
T ss_dssp EEESSCCCSHHH-HHHHSTTTTHHHHHHHH-------------HCGGGHHH----HSSGGGEEEEEECSTTBTTTBCCCH
T ss_pred EEEeeccCCHHH-CeeEECchhHHHHHHHH-------------HCHHHHHh----hcccCcEEEEEECCCeEecccceec
Confidence 469999999977 69999999999999999 58998886 6667899999999999999999999
Q ss_pred c-cccccchhhhhhhhhcCCCCCceecEEeeccCCccccccCcccccccccCCChhhhhHhHHHHHHHHHHhCCce-EEE
Q 011618 192 Q-GIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKA-IVQ 269 (481)
Q Consensus 192 ~-Gm~I~iGKl~LY~a~gGI~P~~~LPV~LDvGTnN~~LL~Dp~YlG~r~~R~~g~~Y~~~vdefv~av~~~~P~~-~Iq 269 (481)
+ ++|+|+||++||++||||| ++|++||+ +| +|||+++|+.++|++ +||
T Consensus 84 hS~sPvmh~ka~lf~~~gGid---~~yi~ldv--------~d-------------------~de~~~~v~~l~~~f~Gin 133 (439)
T 2dvm_A 84 LAGLPVMEGKALLFKRFGGVD---AFPIMIKE--------QE-------------------PNKFIDIVKAIAPTFGGIN 133 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHCCE---EEEEECSC--------CS-------------------HHHHHHHHHHTGGGCSEEE
T ss_pred cccCHHHHHHHHHHHHhCCCC---Ceeeeeec--------CC-------------------HHHHHHHHHHhCccCcEEE
Confidence 5 9999999999999999999 99999999 23 699999999999995 999
Q ss_pred eecCCCchHHHHHHHHhhc--CCccccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHH
Q 011618 270 FEDFQMKWAFETLERYRKR--FCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAA 347 (481)
Q Consensus 270 fEDf~~~naf~iL~ryr~~--~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~ 347 (481)
||||+.|+||++|++|++. +||||||+||||.+.++|+++|++.+|+++++ +|+||+|||+||.+|+.+|.+
T Consensus 134 vED~T~P~k~~il~~l~~avNt~vf~dD~~gtgntd~aG~~~AL~~~g~~l~~---~rvlvlGAGgAg~aia~~L~~--- 207 (439)
T 2dvm_A 134 LEDIASPKCFYILERLREELDIPVFHDDQQGTAAVVLAGLLNALKVVGKKISE---ITLALFGAGAAGFATLRILTE--- 207 (439)
T ss_dssp ECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTT---CCEEEECCSHHHHHHHHHHHH---
T ss_pred EEeCCCchHHHHHHHHHHhcCEEEEeCCCcEEeehHHHHHHHHHHHhCCCccC---CEEEEECccHHHHHHHHHHHH---
Confidence 9999999999999999985 89999999999999999999999999999999 999999999999999999986
Q ss_pred HHcCCChhhhcCeEEEEe----ccceeecCCCC---CChhhhccccccCCcCCcCCCCCHHHHhcccCCcEEEeecCCC-
Q 011618 348 RMAGNNDAFARNKFFLLD----KDGLITKERKN---LDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVG- 419 (481)
Q Consensus 348 ~~~Gls~eeA~~~i~lvD----~~GLi~~~r~~---l~~~k~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~- 419 (481)
.|+++ ++||++| ++||++++ ++ +.+++++|++..+.. ....+|.|+++. +|+|||+|+.+
T Consensus 208 --~G~~~----~~I~vvd~~~~R~G~~~~a-~~~~~L~~~~~~~a~~~~~~---~~~~~L~e~l~~--aDVlInaT~~~~ 275 (439)
T 2dvm_A 208 --AGVKP----ENVRVVELVNGKPRILTSD-LDLEKLFPYRGWLLKKTNGE---NIEGGPQEALKD--ADVLISFTRPGP 275 (439)
T ss_dssp --TTCCG----GGEEEEEEETTEEEECCTT-SCHHHHSTTCHHHHTTSCTT---CCCSSHHHHHTT--CSEEEECSCCCS
T ss_pred --cCCCc----CeEEEEEccCCCcCccccc-cchhHHHHHHHHHhhccccc---cccccHHHHhcc--CCEEEEcCCCcc
Confidence 47653 6899999 99999987 45 788888888754321 124579999988 89999999975
Q ss_pred CCCCHHHHHHhhhcCCCCCEEEecCCCCCCCCCCCCHHHHHhcccCCccccccCc
Q 011618 420 GVFNEEVLKAMRESDSVKPAIFAMSNPTMNGLFSCCVTTFFFYLMAARSSFLTSS 474 (481)
Q Consensus 420 g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~~~t~eda~~wt~g~r~~f~~~~ 474 (481)
|.|++++++.|+ ++||||+||||++ | |++++|++| | +++++||.
T Consensus 276 G~~~~e~v~~m~----~~~iVfDLynP~~--t--~~~~~A~~~--G-~~ivatG~ 319 (439)
T 2dvm_A 276 GVIKPQWIEKMN----EDAIVFPLANPVP--E--ILPEEAKKA--G-ARIVATGR 319 (439)
T ss_dssp SSSCHHHHTTSC----TTCEEEECCSSSC--S--SCHHHHHHH--T-CSEECBSC
T ss_pred CCCChHHHHhcC----CCCEEEECCCCCC--c--chHHHHHHc--C-CeEEcCCC
Confidence 999999999884 7999999999998 9 999999999 3 55665553
No 8
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.75 E-value=3.8e-08 Score=103.14 Aligned_cols=169 Identities=19% Similarity=0.221 Sum_probs=122.0
Q ss_pred CChhhhhHhHHHHHHHHHHhCCceEEEeecCCCchHHHHH---------------------HHHhh-------cCCcc--
Q 011618 243 LEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETL---------------------ERYRK-------RFCMF-- 292 (481)
Q Consensus 243 ~~g~~Y~~~vdefv~av~~~~P~~~IqfEDf~~~naf~iL---------------------~ryr~-------~~~~F-- 292 (481)
-+.|||...++..+.+ ...-|+.+| |-+..=...+- .||+. .+|+|
T Consensus 112 ~~~~ey~~~~~~~~~~-~~~~p~~il---DdGgdl~~~~h~~~~~~~~~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi~v 187 (435)
T 3gvp_A 112 ESEDDFWWCIDRCVNV-EGWQPNMIL---DDGGDLTHWIYKKYPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAMNV 187 (435)
T ss_dssp CCHHHHHHHHHHHHCB-TTBCCSEEE---ESSSHHHHHHHHHCHHHHHTCCEEEECCHHHHHHHTCC--CCCCCSCEEEC
T ss_pred CCHHHHHHHHHHHHhc-cCCCCcEEE---ecchHHHHHHHHHhHHHHhhcceeEeccchhHHHHHHHHHcCCCCCCEEEe
Confidence 3667888877776532 112366655 55554333332 34443 38999
Q ss_pred --------ccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEE
Q 011618 293 --------NDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLL 364 (481)
Q Consensus 293 --------NDDiQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lv 364 (481)
+|++.||+-++++|+..+ ++..+.. .+++|+|+|..|.++|+.+... |. +++.+
T Consensus 188 nds~tK~~fDn~yGt~~s~~~gi~ra---t~~~L~G---ktV~ViG~G~IGk~vA~~Lra~-----Ga-------~Viv~ 249 (435)
T 3gvp_A 188 NDSVTKQKFDNLYCCRESILDGLKRT---TDMMFGG---KQVVVCGYGEVGKGCCAALKAM-----GS-------IVYVT 249 (435)
T ss_dssp TTCHHHHHHHTHHHHHHHHHHHHHHH---HCCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEE
T ss_pred cchhhhhhhhhhhhhHHHHHHHHHHh---hCceecC---CEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEE
Confidence 899999999999999765 6888888 9999999999999999988754 43 68888
Q ss_pred eccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecC
Q 011618 365 DKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMS 444 (481)
Q Consensus 365 D~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLS 444 (481)
|++. .+...|.... ....+|.|+++. .|++|.+++..++++++.++.|. +..||+-.+
T Consensus 250 D~dp-----------~ra~~A~~~G-----~~v~~Leeal~~--ADIVi~atgt~~lI~~e~l~~MK----~gailINvg 307 (435)
T 3gvp_A 250 EIDP-----------ICALQACMDG-----FRLVKLNEVIRQ--VDIVITCTGNKNVVTREHLDRMK----NSCIVCNMG 307 (435)
T ss_dssp CSCH-----------HHHHHHHHTT-----CEECCHHHHTTT--CSEEEECSSCSCSBCHHHHHHSC----TTEEEEECS
T ss_pred eCCh-----------hhhHHHHHcC-----CEeccHHHHHhc--CCEEEECCCCcccCCHHHHHhcC----CCcEEEEec
Confidence 8642 2222222111 013579999987 89999998888999999999994 688999999
Q ss_pred CCCCCCCCCCCHHHH
Q 011618 445 NPTMNGLFSCCVTTF 459 (481)
Q Consensus 445 NPt~~aE~~~t~eda 459 (481)
++.. | +..+..
T Consensus 308 rg~~--E--Id~~~L 318 (435)
T 3gvp_A 308 HSNT--E--IDVASL 318 (435)
T ss_dssp STTT--T--BTGGGG
T ss_pred CCCc--c--CCHHHH
Confidence 9987 7 665543
No 9
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.75 E-value=1.7e-08 Score=105.80 Aligned_cols=129 Identities=18% Similarity=0.232 Sum_probs=103.1
Q ss_pred CCcc----------ccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhc
Q 011618 289 FCMF----------NDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFAR 358 (481)
Q Consensus 289 ~~~F----------NDDiQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~ 358 (481)
+|+| .|++.||+.++++|++. .++..+.. .+|+|+|.|..|.++|+.+... |.
T Consensus 173 iPVinvndsvtk~~~Dn~~Gt~~slldgi~r---atg~~L~G---ktVgIiG~G~IG~~vA~~Lka~-----Ga------ 235 (436)
T 3h9u_A 173 IPAMNVNDSVTKSKFDNLYGCRESLVDGIKR---ATDVMIAG---KTACVCGYGDVGKGCAAALRGF-----GA------ 235 (436)
T ss_dssp SCEEECTTSHHHHTTHHHHHHHHHHHHHHHH---HHCCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC------
T ss_pred CceEeechhhhhhhhhccccchHHHHHHHHH---hcCCcccC---CEEEEEeeCHHHHHHHHHHHHC-----CC------
Confidence 8999 89999999999999965 46888887 9999999999999999998754 42
Q ss_pred CeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCC
Q 011618 359 NKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKP 438 (481)
Q Consensus 359 ~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erP 438 (481)
+++++|++ +.+...|.... ....+|.|+++. +|++|.+++..++++++.++.|. +..
T Consensus 236 -~Viv~D~~-----------p~~a~~A~~~G-----~~~~sL~eal~~--ADVVilt~gt~~iI~~e~l~~MK----~gA 292 (436)
T 3h9u_A 236 -RVVVTEVD-----------PINALQAAMEG-----YQVLLVEDVVEE--AHIFVTTTGNDDIITSEHFPRMR----DDA 292 (436)
T ss_dssp -EEEEECSC-----------HHHHHHHHHTT-----CEECCHHHHTTT--CSEEEECSSCSCSBCTTTGGGCC----TTE
T ss_pred -EEEEECCC-----------hhhhHHHHHhC-----CeecCHHHHHhh--CCEEEECCCCcCccCHHHHhhcC----CCc
Confidence 68888873 22222222211 123479999998 99999888778999999999994 689
Q ss_pred EEEecCCCCCCCCCCCCHHHHHh
Q 011618 439 AIFAMSNPTMNGLFSCCVTTFFF 461 (481)
Q Consensus 439 IIFaLSNPt~~aE~~~t~eda~~ 461 (481)
||+-.|++.. | +.+++..+
T Consensus 293 IVINvgRg~v--E--ID~~~L~~ 311 (436)
T 3h9u_A 293 IVCNIGHFDT--E--IQVAWLKA 311 (436)
T ss_dssp EEEECSSSGG--G--BCHHHHHH
T ss_pred EEEEeCCCCC--c--cCHHHHHh
Confidence 9999999988 8 77877654
No 10
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=98.66 E-value=3.3e-08 Score=101.78 Aligned_cols=231 Identities=16% Similarity=0.251 Sum_probs=138.0
Q ss_pred CChhhHHHHHhcCCCCCeeEEEEecCceeeccCCCCC--ccccccchhhhhhhhhcCCCCCceecEEeeccCCccccccC
Q 011618 155 KDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGV--QGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLED 232 (481)
Q Consensus 155 ~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~--~Gm~I~iGKl~LY~a~gGI~P~~~LPV~LDvGTnN~~LL~D 232 (481)
-++..++++... +.+|+|.++++..+|++|.+. .|..|+.+ ..+|. | +++|.+. +
T Consensus 25 ltP~~v~~L~~~----G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~-~~~~~-a---------diil~vk--------~ 81 (401)
T 1x13_A 25 ATPKTVEQLLKL----GFTVAVESGAGQLASFDDKAFVQAGAEIVEG-NSVWQ-S---------EIILKVN--------A 81 (401)
T ss_dssp CCHHHHHHHHHT----TCEEEEETTTTGGGTCCHHHHHHHTCEEECG-GGGGS-S---------SEEECSS--------C
T ss_pred CCHHHHHHHHHC----CCEEEEEECCCcccCCChHHHHHCCCEEecc-HHHhc-C---------CeEEEeC--------C
Confidence 466777777774 568999999999999999997 49999998 67776 1 5677653 2
Q ss_pred cccccccccCCChhhhhHhHHHHHHHHHHhCCce-EEEeecCCCchHHHHHHHHhhc-CCccc-cCc------c----hh
Q 011618 233 RLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKA-IVQFEDFQMKWAFETLERYRKR-FCMFN-DDI------Q----GT 299 (481)
Q Consensus 233 p~YlG~r~~R~~g~~Y~~~vdefv~av~~~~P~~-~IqfEDf~~~naf~iL~ryr~~-~~~FN-DDi------Q----GT 299 (481)
| .+|.++. .-|+. +|-+=..+. .-..++.++++ +.+|+ +.+ | .+
T Consensus 82 p------------------~~~~i~~---l~~~~~li~~~~~~~--d~~~~~al~~~gI~v~~~e~v~~~~~a~~l~~l~ 138 (401)
T 1x13_A 82 P------------------LDDEIAL---LNPGTTLVSFIWPAQ--NPELMQKLAERNVTVMAMDSVPRISRAQSLDALS 138 (401)
T ss_dssp C------------------CHHHHTT---CCTTCEEEECCCGGG--CHHHHHHHHHTTCEEEEGGGCCCSGGGGGGCHHH
T ss_pred C------------------CHHHHHH---hcCCCcEEEEecCCC--CHHHHHHHHHCCCEEEEeehhhhhhhhcccchHH
Confidence 2 1233322 22543 554444332 22355565554 77663 222 2 45
Q ss_pred HHHHHHHHHHHHHHhCCCC-----------CCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 300 AGVALAGLLGTVRAQGLSL-----------TDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 300 aaV~LAgll~Alr~~g~~l-----------~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
....+|| .+|++..+..+ .+|.+.+|+|+|+|.+|.++++.+... |. +++++|++.
T Consensus 139 ~~a~~ag-~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~ViGaG~iG~~aa~~a~~~-----Ga-------~V~v~D~~~ 205 (401)
T 1x13_A 139 SMANIAG-YRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANSL-----GA-------IVRAFDTRP 205 (401)
T ss_dssp HHHHHHH-HHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCG
T ss_pred HHHHHHH-HHHHHHHHHhcccccCCceeeccCcCCCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEcCCH
Confidence 5556665 44444432211 124458999999999999999887643 42 588899864
Q ss_pred eeecCCCCCCh------------hhhccccccCC-cCCcCCCCCHHHHhcccCCcEEEeecCCC-----CCCCHHHHHHh
Q 011618 369 LITKERKNLDP------------AAAPFAKDPGD-FMGLREGASLLEVVRKVKPHVLLGLSGVG-----GVFNEEVLKAM 430 (481)
Q Consensus 369 Li~~~r~~l~~------------~k~~fA~~~~~-~~~~~~~~~L~e~V~~vkptvLIG~S~~~-----g~Ft~evv~~M 430 (481)
-.......+.. .+..|++...+ +. .....+|.++++. .|++|++...| .+++++.++.|
T Consensus 206 ~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~l~e~~~~--aDvVI~~~~~pg~~ap~li~~~~l~~m 282 (401)
T 1x13_A 206 EVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFI-KAEMELFAAQAKE--VDIIVTTALIPGKPAPKLITREMVDSM 282 (401)
T ss_dssp GGHHHHHHTTCEECCC--------CCHHHHHHSHHHH-HHHHHHHHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHHTS
T ss_pred HHHHHHHHcCCEEEEecccccccccccchhhccHHHH-HHHHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcC
Confidence 32110000100 00001110000 00 0001147888887 89999995443 67999999999
Q ss_pred hhcCCCCCEEEecCCCC-CCCC
Q 011618 431 RESDSVKPAIFAMSNPT-MNGL 451 (481)
Q Consensus 431 a~~~~erPIIFaLSNPt-~~aE 451 (481)
. +..+|+-+|+|. ...|
T Consensus 283 k----~g~vIVdva~~~Gg~v~ 300 (401)
T 1x13_A 283 K----AGSVIVDLAAQNGGNCE 300 (401)
T ss_dssp C----TTCEEEETTGGGTCSBT
T ss_pred C----CCcEEEEEcCCCCCCcC
Confidence 4 678999999873 3345
No 11
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=98.09 E-value=9.7e-06 Score=86.17 Aligned_cols=132 Identities=20% Similarity=0.226 Sum_probs=98.5
Q ss_pred cCCcc----------ccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhh
Q 011618 288 RFCMF----------NDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFA 357 (481)
Q Consensus 288 ~~~~F----------NDDiQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA 357 (481)
.+|+| .|+++||+..++.|+. |.++..|.. .+++|.|+|..|.++|+.+... |.
T Consensus 226 ~iPvinvnDs~tK~~fDn~yGt~~sl~dgi~---r~tg~~L~G---KtVvVtGaGgIG~aiA~~Laa~-----GA----- 289 (488)
T 3ond_A 226 LFPAINVNDSVTKSKFDNLYGCRHSLPDGLM---RATDVMIAG---KVAVVAGYGDVGKGCAAALKQA-----GA----- 289 (488)
T ss_dssp CSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC-----
T ss_pred CCceecccchhhhhHhhhhccccHHHHHHHH---HHcCCcccC---CEEEEECCCHHHHHHHHHHHHC-----CC-----
Confidence 38999 7899999999999887 688888877 9999999998888888877654 52
Q ss_pred cCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCC
Q 011618 358 RNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVK 437 (481)
Q Consensus 358 ~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~er 437 (481)
+++++|++. .+...|.... .+..++.++++. .|+++-.++..++++.+.++.|. +.
T Consensus 290 --~Viv~D~~~-----------~~a~~Aa~~g-----~dv~~lee~~~~--aDvVi~atG~~~vl~~e~l~~mk----~g 345 (488)
T 3ond_A 290 --RVIVTEIDP-----------ICALQATMEG-----LQVLTLEDVVSE--ADIFVTTTGNKDIIMLDHMKKMK----NN 345 (488)
T ss_dssp --EEEEECSCH-----------HHHHHHHHTT-----CEECCGGGTTTT--CSEEEECSSCSCSBCHHHHTTSC----TT
T ss_pred --EEEEEcCCH-----------HHHHHHHHhC-----CccCCHHHHHHh--cCEEEeCCCChhhhhHHHHHhcC----CC
Confidence 688888742 1111111100 012356777776 89999888888999999999993 68
Q ss_pred CEEEecCCCCCCCCCCCCHHHHHhcc
Q 011618 438 PAIFAMSNPTMNGLFSCCVTTFFFYL 463 (481)
Q Consensus 438 PIIFaLSNPt~~aE~~~t~eda~~wt 463 (481)
.||+-.+++.. | ...++.-.|.
T Consensus 346 aiVvNaG~~~~--E--i~~~~l~~~~ 367 (488)
T 3ond_A 346 AIVCNIGHFDN--E--IDMLGLETHP 367 (488)
T ss_dssp EEEEESSSTTT--T--BTHHHHHTST
T ss_pred eEEEEcCCCCc--c--cchHHHHHhh
Confidence 89999999865 7 7777665653
No 12
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.76 E-value=0.0001 Score=77.84 Aligned_cols=120 Identities=18% Similarity=0.218 Sum_probs=92.0
Q ss_pred CCcc----------ccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhc
Q 011618 289 FCMF----------NDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFAR 358 (481)
Q Consensus 289 ~~~F----------NDDiQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~ 358 (481)
+|++ .|...||+-.++.|+. |.++..|.. .+++|+|.|..|.++|+.+... |+
T Consensus 209 ~PvinVnds~tK~~fDn~yG~~eslvdgI~---Ratg~~L~G---KTVgVIG~G~IGr~vA~~lraf-----Ga------ 271 (464)
T 3n58_A 209 FPAINVNDSVTKSKFDNKYGCKESLVDGIR---RGTDVMMAG---KVAVVCGYGDVGKGSAQSLAGA-----GA------ 271 (464)
T ss_dssp SCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC------
T ss_pred CCEEeeccHhhhhhhhhhhcchHHHHHHHH---HhcCCcccC---CEEEEECcCHHHHHHHHHHHHC-----CC------
Confidence 8999 6788999999998885 567888777 9999999999999999988654 42
Q ss_pred CeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCC
Q 011618 359 NKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKP 438 (481)
Q Consensus 359 ~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erP 438 (481)
+++.+|++. .....|.... ....+|.|+++. .|+++-+++..++++++.++.|. +..
T Consensus 272 -~Viv~d~dp-----------~~a~~A~~~G-----~~vv~LeElL~~--ADIVv~atgt~~lI~~e~l~~MK----~GA 328 (464)
T 3n58_A 272 -RVKVTEVDP-----------ICALQAAMDG-----FEVVTLDDAAST--ADIVVTTTGNKDVITIDHMRKMK----DMC 328 (464)
T ss_dssp -EEEEECSSH-----------HHHHHHHHTT-----CEECCHHHHGGG--CSEEEECCSSSSSBCHHHHHHSC----TTE
T ss_pred -EEEEEeCCc-----------chhhHHHhcC-----ceeccHHHHHhh--CCEEEECCCCccccCHHHHhcCC----CCe
Confidence 688777532 1111111110 012469999987 99999988778999999999993 688
Q ss_pred EEEecCCCCC
Q 011618 439 AIFAMSNPTM 448 (481)
Q Consensus 439 IIFaLSNPt~ 448 (481)
||.-.+....
T Consensus 329 ILINvGRgdv 338 (464)
T 3n58_A 329 IVGNIGHFDN 338 (464)
T ss_dssp EEEECSSSTT
T ss_pred EEEEcCCCCc
Confidence 9988888765
No 13
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.60 E-value=0.00074 Score=68.55 Aligned_cols=243 Identities=15% Similarity=0.170 Sum_probs=125.6
Q ss_pred CChhhHHHHHhcCCCCCeeEEEEecCceeeccCCCCC--ccccccchhhhhhhhhcCCCCCceecEEeeccCC-----cc
Q 011618 155 KDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGV--QGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTN-----NQ 227 (481)
Q Consensus 155 ~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~--~Gm~I~iGKl~LY~a~gGI~P~~~LPV~LDvGTn-----N~ 227 (481)
-.|..++++.. .+.+|+|.++++...|+.|... .|..|+.++..++ ++. .++|.+.+- ++
T Consensus 18 l~P~~v~~L~~----~G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~---~~a------diil~v~~p~~~~~~~ 84 (384)
T 1l7d_A 18 ISPEVVKKLVG----LGFEVIVEQGAGVGASITDDALTAAGATIASTAAQAL---SQA------DVVWKVQRPMTAEEGT 84 (384)
T ss_dssp CCHHHHHHHHH----TTCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHH---SSC------SEEEEEECCCCGGGSC
T ss_pred CCHHHHHHHHh----CCCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhh---cCC------CEEEEecCcccccCCH
Confidence 46677777777 3578999999999999999886 5899988877666 333 356665321 11
Q ss_pred ccc----cCcccccccccCCChhhhhHhHHHHHHHHHHhCCceEEEeecCCCchHHHHHHHHhhcCCccccCcchhHHHH
Q 011618 228 KLL----EDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLERYRKRFCMFNDDIQGTAGVA 303 (481)
Q Consensus 228 ~LL----~Dp~YlG~r~~R~~g~~Y~~~vdefv~av~~~~P~~~IqfEDf~~~naf~iL~ryr~~~~~FNDDiQGTaaV~ 303 (481)
+.+ ..-.+++.-+.- ++ .+.++++.++-.. ++.+|-+....+ ...+++|+ ....
T Consensus 85 ~~i~~l~~~~~~i~~~~~~-----~~---~~~~~~~~~~gi~-~~~~e~~~~~~~-------~~~l~~l~------~~a~ 142 (384)
T 1l7d_A 85 DEVALIKEGAVLMCHLGAL-----TN---RPVVEALTKRKIT-AYAMELMPRISR-------AQSMDILS------SQSN 142 (384)
T ss_dssp CGGGGSCTTCEEEEECCGG-----GC---HHHHHHHHHTTCE-EEEGGGCCCSGG-------GGGGCHHH------HHHH
T ss_pred HHHHhhccCCEEEEEeccc-----CC---HHHHHHHHHCCCE-EEEecccccccc-------ccccchhh------HHHH
Confidence 111 111122222210 00 1122233322211 223322211000 00122222 1112
Q ss_pred HH---HHHHHHHHhCCCC-------CCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecC
Q 011618 304 LA---GLLGTVRAQGLSL-------TDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE 373 (481)
Q Consensus 304 LA---gll~Alr~~g~~l-------~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~ 373 (481)
+| +++.+.+..++.. .++.+.+|+|+|+|.+|.++++.+... |. +++.+|++.--...
T Consensus 143 ~ag~~av~~~~~~~~~~~~~~~~~~~~l~g~~V~ViGaG~iG~~aa~~a~~~-----Ga-------~V~~~d~~~~~~~~ 210 (384)
T 1l7d_A 143 LAGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRL-----GA-------VVMATDVRAATKEQ 210 (384)
T ss_dssp HHHHHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCSTTHHH
T ss_pred HHHHHHHHHHHHHhhhcccchhccCCCCCCCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCCHHHHHH
Confidence 22 5566666655411 244559999999999999999877643 42 48888875311000
Q ss_pred CCCCC-------h-------hhhccccccC-CcCCcCCCCCHHHHhcccCCcEEEeecCC-----CCCCCHHHHHHhhhc
Q 011618 374 RKNLD-------P-------AAAPFAKDPG-DFMGLREGASLLEVVRKVKPHVLLGLSGV-----GGVFNEEVLKAMRES 433 (481)
Q Consensus 374 r~~l~-------~-------~k~~fA~~~~-~~~~~~~~~~L~e~V~~vkptvLIG~S~~-----~g~Ft~evv~~Ma~~ 433 (481)
...+. . .+-.|++... ++. ......+.+.++. .|++|.++.. +.+++++.++.|.
T Consensus 211 ~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~-~~~~~~l~~~~~~--aDvVi~~~~~pg~~~~~li~~~~l~~mk-- 285 (384)
T 1l7d_A 211 VESLGGKFITVDDEAMKTAETAGGYAKEMGEEFR-KKQAEAVLKELVK--TDIAITTALIPGKPAPVLITEEMVTKMK-- 285 (384)
T ss_dssp HHHTTCEECCC------------------------CCHHHHHHHHHTT--CSEEEECCCCTTSCCCCCSCHHHHTTSC--
T ss_pred HHHcCCeEEeecccccccccccccchhhcCHHHH-hhhHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCC--
Confidence 00000 0 0000111100 000 0001127788876 8999998833 3578999999994
Q ss_pred CCCCCEEEecCCCC-CCCC
Q 011618 434 DSVKPAIFAMSNPT-MNGL 451 (481)
Q Consensus 434 ~~erPIIFaLSNPt-~~aE 451 (481)
+..+|+-+|-+. ...|
T Consensus 286 --~g~vivdva~~~gg~~~ 302 (384)
T 1l7d_A 286 --PGSVIIDLAVEAGGNCP 302 (384)
T ss_dssp --TTCEEEETTGGGTCSST
T ss_pred --CCCEEEEEecCCCCCee
Confidence 578899898643 3345
No 14
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.17 E-value=9.3e-05 Score=77.01 Aligned_cols=110 Identities=21% Similarity=0.285 Sum_probs=69.4
Q ss_pred CceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCC--------------hhhhcccccc
Q 011618 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLD--------------PAAAPFAKDP 388 (481)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~--------------~~k~~fA~~~ 388 (481)
+.||+|+|+|.+|.++|+++... |. +++++|++.-.......+. +.+..|++..
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~ 257 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRL-----GA-------VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEM 257 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSTTHHHHHHHTTCEECCCCC----------------
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhc
Confidence 38999999999999999988754 42 6889998753211100000 0011233311
Q ss_pred CC-cCCcCCCCCHHHHhcccCCcEEEeecCC-----CCCCCHHHHHHhhhcCCCCCEEEecCC-CCCCCC
Q 011618 389 GD-FMGLREGASLLEVVRKVKPHVLLGLSGV-----GGVFNEEVLKAMRESDSVKPAIFAMSN-PTMNGL 451 (481)
Q Consensus 389 ~~-~~~~~~~~~L~e~V~~vkptvLIG~S~~-----~g~Ft~evv~~Ma~~~~erPIIFaLSN-Pt~~aE 451 (481)
.+ +. ..+..+|.|+++. .|++|++... |.+||+++|+.|. +.+||+-+|- |-..+|
T Consensus 258 s~~~~-~~~~~~l~e~l~~--aDVVI~tvlipg~~ap~Lvt~emv~~Mk----~GsVIVDvA~d~GG~~e 320 (405)
T 4dio_A 258 SGEYQ-VKQAALVAEHIAK--QDIVITTALIPGRPAPRLVTREMLDSMK----PGSVVVDLAVERGGNIE 320 (405)
T ss_dssp -CHHH-HHHHHHHHHHHHT--CSEEEECCCCSSSCCCCCBCHHHHTTSC----TTCEEEETTGGGTCSBT
T ss_pred chhhh-hhhHhHHHHHhcC--CCEEEECCcCCCCCCCEEecHHHHhcCC----CCCEEEEEeCCCCCCcc
Confidence 10 00 0012479999988 9999998533 4689999999994 7899999995 334566
No 15
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=96.75 E-value=0.00072 Score=69.86 Aligned_cols=110 Identities=16% Similarity=0.220 Sum_probs=67.5
Q ss_pred CceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCC-------C---hhhhccccccCC-c
Q 011618 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNL-------D---PAAAPFAKDPGD-F 391 (481)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l-------~---~~k~~fA~~~~~-~ 391 (481)
+.||+|+|+|.+|..+|+.+... |. +++++|++.-....-..+ + .....|++...+ +
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~ 251 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRL-----GA-------KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAE 251 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHH-----TC-------EEEEECSSGGGHHHHHHTTCEECCCC-------------CHHH
T ss_pred CCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHH
Confidence 38999999999999999988765 42 688999864211000000 0 000111111000 0
Q ss_pred CCcCCCCCHHHHhcccCCcEEEeecCC-----CCCCCHHHHHHhhhcCCCCCEEEecCCCC-CCCC
Q 011618 392 MGLREGASLLEVVRKVKPHVLLGLSGV-----GGVFNEEVLKAMRESDSVKPAIFAMSNPT-MNGL 451 (481)
Q Consensus 392 ~~~~~~~~L~e~V~~vkptvLIG~S~~-----~g~Ft~evv~~Ma~~~~erPIIFaLSNPt-~~aE 451 (481)
. .....+|.++++. .|++|++... |.++|+++++.|. +..+|+-+|=+. -.+|
T Consensus 252 ~-~~~~~~l~e~l~~--aDIVI~tv~iPg~~ap~Lvt~emv~~Mk----pGsVIVDvA~d~GG~~e 310 (381)
T 3p2y_A 252 R-AQQQQALEDAITK--FDIVITTALVPGRPAPRLVTAAAATGMQ----PGSVVVDLAGETGGNCE 310 (381)
T ss_dssp H-HHHHHHHHHHHTT--CSEEEECCCCTTSCCCCCBCHHHHHTSC----TTCEEEETTGGGTCSBT
T ss_pred H-hhhHHHHHHHHhc--CCEEEECCCCCCcccceeecHHHHhcCC----CCcEEEEEeCCCCCccc
Confidence 0 0012468999988 9999997433 4579999999994 688999998554 2345
No 16
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.70 E-value=0.022 Score=55.35 Aligned_cols=135 Identities=14% Similarity=0.157 Sum_probs=88.5
Q ss_pred HHHHHHHHhhc-CCccccC------cchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHc
Q 011618 278 AFETLERYRKR-FCMFNDD------IQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMA 350 (481)
Q Consensus 278 af~iL~ryr~~-~~~FNDD------iQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~ 350 (481)
-..+.+..+++ +.++|=. .-.+-+|+=.++..++...+..+.. .+++|+|+|..|..+|+.+...
T Consensus 106 ~id~~~~~~~~gi~v~~~~~~~~~~~~~~~svae~a~~~~l~~~~~~l~g---~~v~IiG~G~iG~~~a~~l~~~----- 177 (293)
T 3d4o_A 106 NTYLNQCMKKTNRTLVKLMERDDIAIYNSIPTAEGTIMMAIQHTDFTIHG---ANVAVLGLGRVGMSVARKFAAL----- 177 (293)
T ss_dssp CHHHHHHHHHHTCEEEEGGGCHHHHHHHHHHHHHHHHHHHHHHCSSCSTT---CEEEEECCSHHHHHHHHHHHHT-----
T ss_pred CHHHHHHHHHcCCeEEEecCCceeeeeccHhHHHHHHHHHHHhcCCCCCC---CEEEEEeeCHHHHHHHHHHHhC-----
Confidence 34444555554 8888843 3355566666666667777777777 9999999999999999987643
Q ss_pred CCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHh
Q 011618 351 GNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAM 430 (481)
Q Consensus 351 Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M 430 (481)
|. +++.+|+.. .+ ....+ .+ .... ....+|.|+++. .|++|-... .+.++++.++.|
T Consensus 178 G~-------~V~~~dr~~----~~--~~~~~-~~---g~~~---~~~~~l~~~l~~--aDvVi~~~p-~~~i~~~~l~~m 234 (293)
T 3d4o_A 178 GA-------KVKVGARES----DL--LARIA-EM---GMEP---FHISKAAQELRD--VDVCINTIP-ALVVTANVLAEM 234 (293)
T ss_dssp TC-------EEEEEESSH----HH--HHHHH-HT---TSEE---EEGGGHHHHTTT--CSEEEECCS-SCCBCHHHHHHS
T ss_pred CC-------EEEEEECCH----HH--HHHHH-HC---CCee---cChhhHHHHhcC--CCEEEECCC-hHHhCHHHHHhc
Confidence 42 688888742 00 00000 00 0000 012358888876 899997664 689999999998
Q ss_pred hhcCCCCCEEEecC-CCC
Q 011618 431 RESDSVKPAIFAMS-NPT 447 (481)
Q Consensus 431 a~~~~erPIIFaLS-NPt 447 (481)
. +..+|+-+| +|.
T Consensus 235 k----~~~~lin~ar~~~ 248 (293)
T 3d4o_A 235 P----SHTFVIDLASKPG 248 (293)
T ss_dssp C----TTCEEEECSSTTC
T ss_pred C----CCCEEEEecCCCC
Confidence 3 567888888 554
No 17
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.19 E-value=0.0069 Score=60.90 Aligned_cols=141 Identities=17% Similarity=0.138 Sum_probs=97.5
Q ss_pred HHHHHHHHHhC--Cc---eEEEeecCCC--chHHHHHHHHh--hcCCcccc---------C-cchhHHHHHHHHHHHHHH
Q 011618 253 DEFMEAVHARW--PK---AIVQFEDFQM--KWAFETLERYR--KRFCMFND---------D-IQGTAGVALAGLLGTVRA 313 (481)
Q Consensus 253 defv~av~~~~--P~---~~IqfEDf~~--~naf~iL~ryr--~~~~~FND---------D-iQGTaaV~LAgll~Alr~ 313 (481)
+|+.+.+.++- |+ .++|+==.+. -+..++++.-. +.+=.||. + ..+-.-+|-.|++-.++.
T Consensus 79 ~ell~~I~~lN~D~~V~GIlvqlPLP~~~~id~~~i~~~I~p~KDVDG~hp~N~G~l~~g~~~~~~~PcTp~gi~~ll~~ 158 (301)
T 1a4i_A 79 SEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKDVDGLTSINAGRLARGDLNDCFIPCTPKGCLELIKE 158 (301)
T ss_dssp HHHHHHHHHHHHCTTCCEEEECSSCCCSSCCCHHHHHHTSCGGGBTTCCSHHHHHHHHTTCCSSCCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCcEEEEeccCCCCCccCHHHHHhccCCCCCccCCChhhHHHHhcCCCCCCccCchHHHHHHHHHH
Confidence 56666666554 54 3666543333 45556665442 22322221 1 123345677889999999
Q ss_pred hCCCCCCCCCceEEEeCcc-HHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcC
Q 011618 314 QGLSLTDFADQKIVVVGAG-SAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFM 392 (481)
Q Consensus 314 ~g~~l~dl~~~riv~~GAG-sAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~ 392 (481)
.+.++.. .++||+|+| ..|.-+|.++... | ..+.+++++
T Consensus 159 ~~i~l~g---k~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------------------- 198 (301)
T 1a4i_A 159 TGVPIAG---RHAVVVGRSKIVGAPMHDLLLWN-----N-------ATVTTCHSK------------------------- 198 (301)
T ss_dssp TTCCCTT---CEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT-------------------------
T ss_pred cCCCCCC---CEEEEECCCchHHHHHHHHHHhC-----C-------CeEEEEECC-------------------------
Confidence 9988887 999999999 5899999888753 3 358888642
Q ss_pred CcCCCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCC
Q 011618 393 GLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNP 446 (481)
Q Consensus 393 ~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNP 446 (481)
..+|.+.++. +|++|+..+.|+.+|+++|+ +.-+|+=++-|
T Consensus 199 ----t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk-------~GavVIDVgi~ 239 (301)
T 1a4i_A 199 ----TAHLDEEVNK--GDILVVATGQPEMVKGEWIK-------PGAIVIDCGIN 239 (301)
T ss_dssp ----CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC-------TTCEEEECCCB
T ss_pred ----cccHHHHhcc--CCEEEECCCCcccCCHHHcC-------CCcEEEEccCC
Confidence 1348999988 99999999999999999875 45588877754
No 18
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.18 E-value=0.068 Score=56.02 Aligned_cols=183 Identities=15% Similarity=0.149 Sum_probs=124.4
Q ss_pred CCChhhhhHhHHHHHHHHHHhC-CceEEEeecCCCchHH--HHHHHHhhcC-----Ccc----------ccCcchhHHHH
Q 011618 242 RLEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWAF--ETLERYRKRF-----CMF----------NDDIQGTAGVA 303 (481)
Q Consensus 242 R~~g~~Y~~~vdefv~av~~~~-P~~~IqfEDf~~~naf--~iL~ryr~~~-----~~F----------NDDiQGTaaV~ 303 (481)
..+..|-..|...|++++...- |..-|-=+|++..-.. -+.+.|+... .++ .|--.-||-=+
T Consensus 125 ~~s~~El~r~~r~f~~~l~~~iG~~~dipApDvgt~~~~m~~~~~~y~~~~g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv 204 (424)
T 3k92_A 125 TMSFGELERLSRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEYSRLREFDSPGFITGKPLVLGGSQGRETATAQGV 204 (424)
T ss_dssp GSCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGCSSCCGGGTCCTTTTTHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCCCccCCcCCCCHHHHHHHHHHHHHHhCCCCcceeecccccCCCcCCCcccHHHHH
Confidence 3456677788899999998876 7777888999864221 2557775321 122 33345588888
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhh-h
Q 011618 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAA-A 382 (481)
Q Consensus 304 LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k-~ 382 (481)
..++-.+++..|.+|+. .||+|-|.|..|...|++|.+. |. +-+.+.|++|-|.... .|+... +
T Consensus 205 ~~~~~~~~~~~g~~l~g---~~vaVqG~GnVG~~aa~~l~e~-----Ga------kVVavsD~~G~iyd~~-GlD~~~l~ 269 (424)
T 3k92_A 205 TICIEEAVKKKGIKLQN---ARIIIQGFGNAGSFLAKFMHDA-----GA------KVIGISDANGGLYNPD-GLDIPYLL 269 (424)
T ss_dssp HHHHHHHHHHTTCCGGG---CEEEEECCSHHHHHHHHHHHHH-----TC------EEEEEECSSCEEECTT-CCCHHHHH
T ss_pred HHHHHHHHHHcCCCccc---CEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC-CCCHHHHH
Confidence 88888999999988777 9999999999999999998765 32 4467999999999654 354332 1
Q ss_pred ccccccCCcCCc-CCCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCC
Q 011618 383 PFAKDPGDFMGL-REGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNP 446 (481)
Q Consensus 383 ~fA~~~~~~~~~-~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNP 446 (481)
.+......+.+- ....+-.+ +-.++.||||=+.. .+.+|++-++.+ ...+|.--+|=
T Consensus 270 ~~~~~~g~i~~~~a~~~~~~~-i~~~~~DIliPcA~-~n~I~~~~a~~l-----~ak~V~EgAN~ 327 (424)
T 3k92_A 270 DKRDSFGMVTNLFTDVITNEE-LLEKDCDILVPAAI-SNQITAKNAHNI-----QASIVVERANG 327 (424)
T ss_dssp HHCCSSSCCGGGCSCCBCHHH-HHHSCCSEEEECSC-SSCBCTTTGGGC-----CCSEEECCSSS
T ss_pred HHHHHhCCCCCCCcEEecCcc-ceeccccEEeecCc-ccccChhhHhhc-----CceEEEcCCCC
Confidence 222211111000 01122333 34578999998887 599999988877 46788877774
No 19
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.10 E-value=0.36 Score=50.99 Aligned_cols=183 Identities=11% Similarity=0.090 Sum_probs=123.4
Q ss_pred cCCChhhhhHhHHHHHHHHHHhC-CceEEEeecCCCchHH--HHHHHHh---hcC-Ccc----------ccCcchhHHHH
Q 011618 241 PRLEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWAF--ETLERYR---KRF-CMF----------NDDIQGTAGVA 303 (481)
Q Consensus 241 ~R~~g~~Y~~~vdefv~av~~~~-P~~~IqfEDf~~~naf--~iL~ryr---~~~-~~F----------NDDiQGTaaV~ 303 (481)
+..+..|-..|...|+..+.+.. |...|--.|++..--- -+.+.|+ +.. .|| .+.-..||-=+
T Consensus 139 k~~s~~El~R~~~~f~~eL~~~iG~d~dvpa~Dig~~~~em~~~~~~y~~~~~~~~~v~TGk~~~~GGs~~r~~aTg~Gv 218 (450)
T 4fcc_A 139 KGKSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGL 218 (450)
T ss_dssp TTCCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTCCSCCCSSCCGGGTCCTTTTTHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHhhheecCCCCCCccceeecchhhhhhhhhhhhccCCCceeecCCCcccCCCCCCCCceeeeH
Confidence 34577788889999999987766 8889999999754321 2444444 332 232 23334477777
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhc
Q 011618 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAP 383 (481)
Q Consensus 304 LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~ 383 (481)
.-++-.+++..+.+|+. .||+|-|.|..|...|+.|.+. |. +=|-+-|++|-|.+.. .++..+..
T Consensus 219 ~~~~~~~~~~~~~~l~G---k~vaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~i~d~~-Gid~e~l~ 283 (450)
T 4fcc_A 219 VYFTEAMLKRHGMGFEG---MRVSVSGSGNVAQYAIEKAMEF-----GA------RVITASDSSGTVVDES-GFTKEKLA 283 (450)
T ss_dssp HHHHHHHHHHTTCCSTT---CEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEEETTEEEECTT-CCCHHHHH
T ss_pred HHHHHHHHHHcCCCcCC---CEEEEeCCChHHHHHHHHHHhc-----CC------eEEEEecCCceEEeCC-CCCHHHHH
Confidence 77888889999988877 9999999999999999998764 42 4567889999998654 35543311
Q ss_pred cccccCCcCCcCCCCCHHH-------------HhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCC
Q 011618 384 FAKDPGDFMGLREGASLLE-------------VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (481)
Q Consensus 384 fA~~~~~~~~~~~~~~L~e-------------~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSN 445 (481)
...+... .....+.+ .+-.++.||++=+.. .+.+|++-++.+.+ +...+|.--+|
T Consensus 284 ~l~e~k~----~~~g~v~~~~~~~g~~~~~~~~i~~~~~DI~iPcAl-~~~I~~~~a~~L~a--~g~k~IaEgAN 351 (450)
T 4fcc_A 284 RLIEIKS----SRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCAT-QNELDVDAAHQLIA--NGVKAVAEGAN 351 (450)
T ss_dssp HHHHHHT----STTCCHHHHHHHHTCEEEETCCGGGSCCSEEEECSC-TTCBCHHHHHHHHH--TTCCEEECCSS
T ss_pred HHHHHhc----ccCCccccccccCCcEEecCcccccCCccEEeeccc-cccccHHHHHHHHh--cCceEEecCCC
Confidence 1100000 00001111 133478999998887 69999999999954 44568887777
No 20
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=95.98 E-value=0.012 Score=58.73 Aligned_cols=107 Identities=17% Similarity=0.198 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCceEEEeCccH-HHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCC
Q 011618 300 AGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLD 378 (481)
Q Consensus 300 aaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGs-Ag~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~ 378 (481)
.-+|-.|++..++..+.+|+. .++||+|+|. .|..+|.+|... |. .+.+++++
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~G---k~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~hs~----------- 194 (285)
T 3l07_A 141 ESCTPKGIMTMLREYGIKTEG---AYAVVVGASNVVGKPVSQLLLNA-----KA-------TVTTCHRF----------- 194 (285)
T ss_dssp CCHHHHHHHHHHHHTTCCCTT---CEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-----------
T ss_pred CCCCHHHHHHHHHHhCCCCCC---CEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC-----------
Confidence 346777888999999998888 9999999876 899999988753 32 57777642
Q ss_pred hhhhccccccCCcCCcCCCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecC-CCCCC---CCCCC
Q 011618 379 PAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMS-NPTMN---GLFSC 454 (481)
Q Consensus 379 ~~k~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLS-NPt~~---aE~~~ 454 (481)
..+|.+.++. +|++|...+.|+.+++|+|+ +.-+|+=++ ||... -. +
T Consensus 195 ------------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk-------~GavVIDvgi~~~~g~l~GD--V 245 (285)
T 3l07_A 195 ------------------TTDLKSHTTK--ADILIVAVGKPNFITADMVK-------EGAVVIDVGINHVDGKIVGD--V 245 (285)
T ss_dssp ------------------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC-------TTCEEEECCCEEETTEEECS--B
T ss_pred ------------------chhHHHhccc--CCEEEECCCCCCCCCHHHcC-------CCcEEEEecccCcCCceecC--c
Confidence 1248899988 99999999999999998874 455777664 44211 23 5
Q ss_pred CHHHHHh
Q 011618 455 CVTTFFF 461 (481)
Q Consensus 455 t~eda~~ 461 (481)
.++++.+
T Consensus 246 df~~v~~ 252 (285)
T 3l07_A 246 DFAAVKD 252 (285)
T ss_dssp CHHHHTT
T ss_pred cHHHHHh
Confidence 5666644
No 21
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=95.96 E-value=0.012 Score=58.61 Aligned_cols=154 Identities=16% Similarity=0.162 Sum_probs=100.6
Q ss_pred HHHHHHHHHhC--Cce---EEEeecCCCchHHHHHHHHh--hcCCccc---------cCcchhHHHHHHHHHHHHHHhCC
Q 011618 253 DEFMEAVHARW--PKA---IVQFEDFQMKWAFETLERYR--KRFCMFN---------DDIQGTAGVALAGLLGTVRAQGL 316 (481)
Q Consensus 253 defv~av~~~~--P~~---~IqfEDf~~~naf~iL~ryr--~~~~~FN---------DDiQGTaaV~LAgll~Alr~~g~ 316 (481)
+|+.+.+.+.. |++ ++|+==.+.-+..++++.-. +.+=.|| .+-.|-.-+|-.|++..++..+.
T Consensus 77 ~ell~~I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~p~KDVDg~~~~N~g~l~~g~~~g~~PcTp~gv~~lL~~~~i 156 (285)
T 3p2o_A 77 NELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGFHPINVGYLNLGLESGFLPCTPLGVMKLLKAYEI 156 (285)
T ss_dssp HHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCGGGCTTCCSHHHHHHHHTTCCSSCCCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCCCCEEEecCCCCCCcCHHHHHhhCCcccccccCCHhhhhhhhcCCCCCCCCCCHHHHHHHHHHhCC
Confidence 56666666665 543 55553223334444554432 2222222 22222345778889999999999
Q ss_pred CCCCCCCceEEEeCccH-HHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcC
Q 011618 317 SLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLR 395 (481)
Q Consensus 317 ~l~dl~~~riv~~GAGs-Ag~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~ 395 (481)
+++. .++||+|+|. .|..+|.+|... |. .+.+++++
T Consensus 157 ~l~G---k~vvVvGrs~iVG~p~A~lL~~~-----gA-------tVtv~h~~---------------------------- 193 (285)
T 3p2o_A 157 DLEG---KDAVIIGASNIVGRPMATMLLNA-----GA-------TVSVCHIK---------------------------- 193 (285)
T ss_dssp CCTT---CEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT----------------------------
T ss_pred CCCC---CEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC----------------------------
Confidence 8888 9999999876 899999998753 32 57777652
Q ss_pred CCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecC-CCCCC----CCCCCCHHHHHh
Q 011618 396 EGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMS-NPTMN----GLFSCCVTTFFF 461 (481)
Q Consensus 396 ~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLS-NPt~~----aE~~~t~eda~~ 461 (481)
..+|.+.++. +|++|...+.|+.++.++|+ +.-+|+=++ ||.+. -- +.++++.+
T Consensus 194 -t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk-------~GavVIDVgi~~~~~gkl~GD--Vdf~~v~~ 252 (285)
T 3p2o_A 194 -TKDLSLYTRQ--ADLIIVAAGCVNLLRSDMVK-------EGVIVVDVGINRLESGKIVGD--VDFEEVSK 252 (285)
T ss_dssp -CSCHHHHHTT--CSEEEECSSCTTCBCGGGSC-------TTEEEEECCCEECTTSCEECS--BCHHHHTT
T ss_pred -chhHHHHhhc--CCEEEECCCCCCcCCHHHcC-------CCeEEEEeccCcccCCCEecc--ccHHHHHh
Confidence 1248899988 99999999999999998874 345776664 55431 23 45666544
No 22
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=95.88 E-value=0.32 Score=51.44 Aligned_cols=192 Identities=14% Similarity=0.107 Sum_probs=125.8
Q ss_pred CChhhhhHhHHHHHHHHHHhC-CceEEEeecCCCchH--HHHHHHHhhc---CC-cc----------ccCcchhHHHHHH
Q 011618 243 LEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWA--FETLERYRKR---FC-MF----------NDDIQGTAGVALA 305 (481)
Q Consensus 243 ~~g~~Y~~~vdefv~av~~~~-P~~~IqfEDf~~~na--f~iL~ryr~~---~~-~F----------NDDiQGTaaV~LA 305 (481)
.+..|...|...||..+.+.. |..-|-=+|++..-. --+.+.|+.. .+ |+ ..--.-||-=+.-
T Consensus 145 ~s~~el~r~~r~f~~eL~~~iGp~~DvpApDvGt~~~em~w~~~~y~~~~~~~~g~vTGKp~~~GGs~~r~~aTg~Gv~~ 224 (456)
T 3r3j_A 145 KSENEILKFCQSFMTNLFRYIGPNTDVPAGDIGVGGREIGYLFGQYKKLKNSFEGVLTGKNIKWGGSNIRAEATGYGVVY 224 (456)
T ss_dssp CCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCCSCBSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCCCCHHHHHHHHHHHHhhcCcccceecCCcccccCCCCCCcccchHHHH
Confidence 456777888888999986555 888889999987432 2255666642 21 11 1122346666666
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhc--
Q 011618 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAP-- 383 (481)
Q Consensus 306 gll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~-- 383 (481)
++-.+++..|.+|+. .||+|-|.|..|...|+.|.++ |. +-+.+.|++|-|.+.. .|+..+..
T Consensus 225 ~~~~~~~~~g~~l~g---~~VaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~iyd~~-Gld~~~l~~~ 289 (456)
T 3r3j_A 225 FAENVLKDLNDNLEN---KKCLVSGSGNVAQYLVEKLIEK-----GA------IVLTMSDSNGYILEPN-GFTKEQLNYI 289 (456)
T ss_dssp HHHHHHHTTTCCSTT---CCEEEECCSHHHHHHHHHHHHH-----TC------CBCCEECSSCEEECTT-CCCHHHHHHH
T ss_pred HHHHHHHHcCCCccC---CEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC-CCCHHHHHHH
Confidence 777788888887777 9999999999999999998765 32 3455899999998654 35433211
Q ss_pred -------------cccccCCcCCcCCCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCCCCCC
Q 011618 384 -------------FAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNG 450 (481)
Q Consensus 384 -------------fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~a 450 (481)
|+...+..... .... +-.++.||||=+.. ++.+|++-++.+.+ +..+||.--+|=-.-.
T Consensus 290 ~~~k~~~~~~v~~~~~~~~~a~~v-~~~~----i~~~~~DI~iPcA~-~~~I~~~na~~l~~--~~ak~V~EgAN~p~T~ 361 (456)
T 3r3j_A 290 MDIKNNQRLRLKEYLKYSKTAKYF-ENQK----PWNIPCDIAFPCAT-QNEINENDADLFIQ--NKCKMIVEGANMPTHI 361 (456)
T ss_dssp HHHHHTSCCCGGGGGGTCSSCEEE-CSCC----GGGSCCSEEEECSC-TTCBCHHHHHHHHH--HTCCEEECCSSSCBCT
T ss_pred HHHHHhcCcchhhhhhcCCCceEe-CCcc----ccccCccEEEeCCC-ccchhhHHHHHHHh--cCCeEEEecCCCCCCH
Confidence 11100000000 1112 33468999998887 79999999999943 4567998888854434
Q ss_pred CCCCCHHHHHh
Q 011618 451 LFSCCVTTFFF 461 (481)
Q Consensus 451 E~~~t~eda~~ 461 (481)
| +++.+.
T Consensus 362 e----A~~iL~ 368 (456)
T 3r3j_A 362 K----ALHKLK 368 (456)
T ss_dssp T----HHHHHH
T ss_pred H----HHHHHH
Confidence 5 556554
No 23
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=95.77 E-value=0.015 Score=58.00 Aligned_cols=106 Identities=17% Similarity=0.196 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCceEEEeCccH-HHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCCh
Q 011618 301 GVALAGLLGTVRAQGLSLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDP 379 (481)
Q Consensus 301 aV~LAgll~Alr~~g~~l~dl~~~riv~~GAGs-Ag~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~ 379 (481)
-+|-.|++..++..+.+++. .++||+|+|. .|..+|.+|... |. .+.+++++
T Consensus 142 PcTp~gv~~lL~~~~i~l~G---k~vvVvGrs~iVG~plA~lL~~~-----gA-------tVtv~hs~------------ 194 (286)
T 4a5o_A 142 PCTPKGIMTLLASTGADLYG---MDAVVVGASNIVGRPMALELLLG-----GC-------TVTVTHRF------------ 194 (286)
T ss_dssp CHHHHHHHHHHHHTTCCCTT---CEEEEECTTSTTHHHHHHHHHHT-----TC-------EEEEECTT------------
T ss_pred CCCHHHHHHHHHHhCCCCCC---CEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC------------
Confidence 45678899999999998888 9999999875 899999998753 32 57777542
Q ss_pred hhhccccccCCcCCcCCCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEec-CCCCCC----CCCCC
Q 011618 380 AAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAM-SNPTMN----GLFSC 454 (481)
Q Consensus 380 ~k~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaL-SNPt~~----aE~~~ 454 (481)
..+|.+.++. +|++|+..+.|+.++.++|+ +.-+|+=+ +||.+. -- +
T Consensus 195 -----------------T~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk-------~GavVIDvgi~~~~~gkl~GD--V 246 (286)
T 4a5o_A 195 -----------------TRDLADHVSR--ADLVVVAAGKPGLVKGEWIK-------EGAIVIDVGINRQADGRLVGD--V 246 (286)
T ss_dssp -----------------CSCHHHHHHT--CSEEEECCCCTTCBCGGGSC-------TTCEEEECCSCSSCCCCSSCS--B
T ss_pred -----------------CcCHHHHhcc--CCEEEECCCCCCCCCHHHcC-------CCeEEEEecccccccCCcccC--c
Confidence 1248899988 99999999999999998884 34577766 466531 23 5
Q ss_pred CHHHHHh
Q 011618 455 CVTTFFF 461 (481)
Q Consensus 455 t~eda~~ 461 (481)
.+|++.+
T Consensus 247 df~~v~~ 253 (286)
T 4a5o_A 247 EYEVAAQ 253 (286)
T ss_dssp CHHHHHH
T ss_pred cHHHHHh
Confidence 5666654
No 24
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=95.69 E-value=0.19 Score=52.53 Aligned_cols=178 Identities=19% Similarity=0.204 Sum_probs=119.7
Q ss_pred CChhhhhHhHHHHHHHHHHhC-CceEEEeecCCCch--HHHHHHHHhhc--C---Ccc----------ccCcchhHHHHH
Q 011618 243 LEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKW--AFETLERYRKR--F---CMF----------NDDIQGTAGVAL 304 (481)
Q Consensus 243 ~~g~~Y~~~vdefv~av~~~~-P~~~IqfEDf~~~n--af~iL~ryr~~--~---~~F----------NDDiQGTaaV~L 304 (481)
.+..|-..|...|++++...- |..-|-=+|++..- ---+.++|+.. . .++ .+.-.-||-=+.
T Consensus 123 ~s~~El~r~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~ 202 (419)
T 3aoe_E 123 LSPQELERLVRRYTAELVGLIGPDSDILGPDLGADQQVMAWIMDTYSMTVGSTVPGVVTGKPHALGGSEGRDDAAGLGAL 202 (419)
T ss_dssp SCHHHHHHHHHHHHHHHTTTCBTTTEEEEEBTTBCHHHHHHHHHHHHHHHTSCCGGGBSSCCGGGTCCSSCSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeeeccchhcCCCCCCccchHHHHH
Confidence 455677778899999998877 88888899998752 22356677432 0 111 233345766666
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEE-EEeccceeecCCCCCChhh-h
Q 011618 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFF-LLDKDGLITKERKNLDPAA-A 382 (481)
Q Consensus 305 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~-lvD~~GLi~~~r~~l~~~k-~ 382 (481)
-++-.+++..|.+|+. .||+|-|.|..|...|++|.+. | -+++ +.|++|-|.+.. .|+... .
T Consensus 203 ~~~~~~~~~~g~~l~g---k~vaVqG~GnVG~~~a~~L~~~-----G-------akVVavsD~~G~i~dp~-Gld~~~l~ 266 (419)
T 3aoe_E 203 LVLEALAKRRGLDLRG---ARVVVQGLGQVGAAVALHAERL-----G-------MRVVAVATSMGGMYAPE-GLDVAEVL 266 (419)
T ss_dssp HHHHHHHHHHTCCCTT---CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEEETTEEEECTT-CCCHHHHH
T ss_pred HHHHHHHHhcCCCccC---CEEEEECcCHHHHHHHHHHHHC-----C-------CEEEEEEcCCCeEECCC-CCCHHHHH
Confidence 6778888889988777 9999999999999999988753 4 2566 999999998754 344322 1
Q ss_pred ccccccCCcCCcCCCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCC
Q 011618 383 PFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (481)
Q Consensus 383 ~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSN 445 (481)
.+......+.+- ..+-.+ +-.++.|||+=++. ++.+|++-.+.+ ...||.--+|
T Consensus 267 ~~~~~~g~v~~~--~~~~~e-~~~~~~DVliP~A~-~n~i~~~~A~~l-----~ak~V~EgAN 320 (419)
T 3aoe_E 267 SAYEATGSLPRL--DLAPEE-VFGLEAEVLVLAAR-EGALDGDRARQV-----QAQAVVEVAN 320 (419)
T ss_dssp HHHHHHSSCSCC--CBCTTT-GGGSSCSEEEECSC-TTCBCHHHHTTC-----CCSEEEECST
T ss_pred HHHHhhCCccee--eccchh-hhccCceEEEeccc-ccccccchHhhC-----CceEEEECCC
Confidence 121111111000 000012 34578999998875 799999988877 3568888887
No 25
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=95.63 E-value=0.016 Score=57.53 Aligned_cols=152 Identities=9% Similarity=0.103 Sum_probs=100.4
Q ss_pred HHHHHHHHHhC--Cce---EEEeecCCCchHHHHHHHH--hhcCCccccC--------cchhHHHHHHHHHHHHHHhCCC
Q 011618 253 DEFMEAVHARW--PKA---IVQFEDFQMKWAFETLERY--RKRFCMFNDD--------IQGTAGVALAGLLGTVRAQGLS 317 (481)
Q Consensus 253 defv~av~~~~--P~~---~IqfEDf~~~naf~iL~ry--r~~~~~FNDD--------iQGTaaV~LAgll~Alr~~g~~ 317 (481)
+|+++.+++.. |++ ++|+==.+.-+..++++.- .+.+=.||.- ..+-.-+|-.|++..++..+
T Consensus 70 ~ell~~I~~lN~D~~v~GIlvqlPLP~~id~~~v~~~I~p~KDVDG~~p~n~G~l~~g~~~~~PcTp~gv~~lL~~~~-- 147 (276)
T 3ngx_A 70 KDLLKRIDDLAKDPQINGIMIENPLPKGFDYYEIVRNIPYYKDVDALSPYNQGLIALNREFLVPATPRAVIDIMDYYG-- 147 (276)
T ss_dssp HHHHHHHHHHHHCTTCCEEEECSCCCTTCCHHHHHTTSCGGGBTTCCSHHHHHHHHTTCCSSCCHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHHcCCCCCcEEEEeCCCCCCCCHHHHHhhCCCCCcccCCCccchhhhhcCCCCCCCCcHHHHHHHHHHhC--
Confidence 67777777665 653 5665433333445555443 2223333322 12234567789999999998
Q ss_pred CCCCCCceEEEeCcc-HHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCC
Q 011618 318 LTDFADQKIVVVGAG-SAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE 396 (481)
Q Consensus 318 l~dl~~~riv~~GAG-sAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~ 396 (481)
++. .++||+|+| ..|..+|.++... | ..+.+++++
T Consensus 148 l~G---k~vvVvG~s~iVG~plA~lL~~~-----g-------AtVtv~~~~----------------------------- 183 (276)
T 3ngx_A 148 YHE---NTVTIVNRSPVVGRPLSMMLLNR-----N-------YTVSVCHSK----------------------------- 183 (276)
T ss_dssp CCS---CEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT-----------------------------
T ss_pred cCC---CEEEEEcCChHHHHHHHHHHHHC-----C-------CeEEEEeCC-----------------------------
Confidence 666 999999998 5899999998753 3 257788652
Q ss_pred CCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecC-CC-CCC--CCCCCCHHHHHh
Q 011618 397 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMS-NP-TMN--GLFSCCVTTFFF 461 (481)
Q Consensus 397 ~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLS-NP-t~~--aE~~~t~eda~~ 461 (481)
..+|.+.++. +|++|...+.|+.+++++|+ +.-+|+=++ || ..+ -. +.+|++.+
T Consensus 184 t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk-------~GavVIDvgi~~~~gkl~GD--Vdf~~v~~ 241 (276)
T 3ngx_A 184 TKDIGSMTRS--SKIVVVAVGRPGFLNREMVT-------PGSVVIDVGINYVNDKVVGD--ANFEDLSE 241 (276)
T ss_dssp CSCHHHHHHH--SSEEEECSSCTTCBCGGGCC-------TTCEEEECCCEEETTEEECS--BCHHHHHT
T ss_pred cccHHHhhcc--CCEEEECCCCCccccHhhcc-------CCcEEEEeccCccCCceecc--ccHHHHhh
Confidence 1248999999 99999999999999998873 455887775 44 111 23 55666654
No 26
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=95.53 E-value=0.16 Score=53.41 Aligned_cols=192 Identities=12% Similarity=0.139 Sum_probs=124.9
Q ss_pred CChhhhhHhHHHHHHHHHHhC-CceEEEeecCCCc--hHHHHHHHHhhc--C---Ccc----------ccCcchhHHHHH
Q 011618 243 LEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMK--WAFETLERYRKR--F---CMF----------NDDIQGTAGVAL 304 (481)
Q Consensus 243 ~~g~~Y~~~vdefv~av~~~~-P~~~IqfEDf~~~--naf~iL~ryr~~--~---~~F----------NDDiQGTaaV~L 304 (481)
.+..|-..|...|+.++...- |..-|-=+|++.. .---+.+.|+.. . .++ .+.-.-||-=+.
T Consensus 140 ~s~~Eler~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~vTGkp~~~GGs~~r~~aTg~Gv~ 219 (440)
T 3aog_A 140 LSPGELERLTRRYTSEIGILLGPDRDIPAPDVNTGEREMAWMMDTYSMNVGRTVPGVVTGKPIALGGSLGRRDATGRGVF 219 (440)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTCTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeEeccchhhCCCCCCCcchHHHHH
Confidence 455677788999999998877 7888888999874 122356677431 1 222 233345666666
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEE-EEeccceeecCCCCCChhh-h
Q 011618 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFF-LLDKDGLITKERKNLDPAA-A 382 (481)
Q Consensus 305 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~-lvD~~GLi~~~r~~l~~~k-~ 382 (481)
-++-.+++..|.+++. .||+|.|.|..|...|++|.+. |. +++ +.|++|-|.+.. .|+... .
T Consensus 220 ~~~~~~~~~~g~~l~g---~~vaVqGfGnVG~~~a~~L~e~-----Ga-------kvVavsD~~G~i~dp~-Gld~~~l~ 283 (440)
T 3aog_A 220 ITAAAAAEKIGLQVEG---ARVAIQGFGNVGNAAARAFHDH-----GA-------RVVAVQDHTGTVYNEA-GIDPYDLL 283 (440)
T ss_dssp HHHHHHHHHHTCCSTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEECSSCEEECTT-CCCHHHHH
T ss_pred HHHHHHHHhcCCCccC---CEEEEeccCHHHHHHHHHHHHC-----CC-------EEEEEEcCCcEEECCC-CCCHHHHH
Confidence 6777888888987777 9999999999999999988764 42 455 999999988765 333322 1
Q ss_pred ccccccCCcCCc--CCCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCCCCCCCCCCCHHHHH
Q 011618 383 PFAKDPGDFMGL--REGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNGLFSCCVTTFF 460 (481)
Q Consensus 383 ~fA~~~~~~~~~--~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~~~t~eda~ 460 (481)
.+......+.+- ....+-.| +-.+++||||=++. ++.+|++-++.+ ...+|.--+|--.-.| +++.+
T Consensus 284 ~~~~~~g~i~~y~~a~~i~~~e-i~~~~~DIlvPcA~-~n~i~~~na~~l-----~ak~VvEgAN~p~t~e----A~~iL 352 (440)
T 3aog_A 284 RHVQEFGGVRGYPKAEPLPAAD-FWGLPVEFLVPAAL-EKQITEQNAWRI-----RARIVAEGANGPTTPA----ADDIL 352 (440)
T ss_dssp HHHHHTSSSTTCTTSEECCHHH-HTTCCCSEEEECSS-SSCBCTTTGGGC-----CCSEEECCSSSCBCHH----HHHHH
T ss_pred HHHHhcCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccchhhHHHc-----CCcEEEecCccccCHH----HHHHH
Confidence 111111111100 01123344 44678999998876 799999988887 3567877777433234 44554
Q ss_pred h
Q 011618 461 F 461 (481)
Q Consensus 461 ~ 461 (481)
+
T Consensus 353 ~ 353 (440)
T 3aog_A 353 L 353 (440)
T ss_dssp H
T ss_pred H
Confidence 3
No 27
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=95.49 E-value=0.016 Score=57.84 Aligned_cols=154 Identities=16% Similarity=0.118 Sum_probs=101.3
Q ss_pred HHHHHHHHHhC--Cc---eEEEeecCCCchHHHHHHHHh--hcCCcccc--------CcchhHHHHHHHHHHHHHHhCCC
Q 011618 253 DEFMEAVHARW--PK---AIVQFEDFQMKWAFETLERYR--KRFCMFND--------DIQGTAGVALAGLLGTVRAQGLS 317 (481)
Q Consensus 253 defv~av~~~~--P~---~~IqfEDf~~~naf~iL~ryr--~~~~~FND--------DiQGTaaV~LAgll~Alr~~g~~ 317 (481)
+|+.+.+.++- |+ .++|+==.+.-+..++++.-. +.+=.||. ...+-.-+|-.|++-.++..+.+
T Consensus 77 ~ell~~I~~lN~D~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDG~~p~n~g~l~~g~~~~~PcTp~gi~~ll~~~~i~ 156 (288)
T 1b0a_A 77 AELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNID 156 (288)
T ss_dssp HHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHTTSCTTTCTTCCSHHHHHHHHTTCCSSCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhccCCccCcccCCccchhHHhCCCCCCCCCcHHHHHHHHHHcCCC
Confidence 56666666654 54 366664333334444444331 11111221 01233456778899999999998
Q ss_pred CCCCCCceEEEeCccH-HHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCC
Q 011618 318 LTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE 396 (481)
Q Consensus 318 l~dl~~~riv~~GAGs-Ag~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~ 396 (481)
++. .++||+|+|. .|.-+|.++... | ..+.+++++
T Consensus 157 l~g---k~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~----------------------------- 192 (288)
T 1b0a_A 157 TFG---LNAVVIGASNIVGRPMSMELLLA-----G-------CTTTVTHRF----------------------------- 192 (288)
T ss_dssp CTT---CEEEEECCCTTTHHHHHHHHHTT-----T-------CEEEEECSS-----------------------------
T ss_pred CCC---CEEEEECCChHHHHHHHHHHHHC-----C-------CeEEEEeCC-----------------------------
Confidence 888 9999999995 699999887653 3 368887632
Q ss_pred CCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCCC-CC----CCCCCCHHHHHh
Q 011618 397 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPT-MN----GLFSCCVTTFFF 461 (481)
Q Consensus 397 ~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt-~~----aE~~~t~eda~~ 461 (481)
..+|.+.++. +|++|+..+.|+.+|+++|+ +.-+|+=++-|- .. -. +.++++.+
T Consensus 193 t~~L~~~~~~--ADIVI~Avg~p~lI~~~~vk-------~GavVIDVgi~r~~~g~l~GD--Vdf~~v~~ 251 (288)
T 1b0a_A 193 TKNLRHHVEN--ADLLIVAVGKPGFIPGDWIK-------EGAIVIDVGINRLENGKVVGD--VVFEDAAK 251 (288)
T ss_dssp CSCHHHHHHH--CSEEEECSCCTTCBCTTTSC-------TTCEEEECCCEECTTSCEECS--BCHHHHHH
T ss_pred chhHHHHhcc--CCEEEECCCCcCcCCHHHcC-------CCcEEEEccCCccCCCCccCC--cCHHHHhh
Confidence 1348999998 99999999999999999874 455888777552 11 24 55666654
No 28
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=95.44 E-value=0.077 Score=56.30 Aligned_cols=124 Identities=20% Similarity=0.261 Sum_probs=86.6
Q ss_pred cCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecC
Q 011618 294 DDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE 373 (481)
Q Consensus 294 DDiQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~ 373 (481)
+.+.|+......|+ .+.++..+.. .+++|+|.|..|.++|+.+... |+ +++.+|++..
T Consensus 234 r~~~~~~~~l~~gw---~r~~~~~l~G---ktVgIIG~G~IG~~vA~~l~~~-----G~-------~Viv~d~~~~---- 291 (479)
T 1v8b_A 234 DNVYGCRHSLPDGL---MRATDFLISG---KIVVICGYGDVGKGCASSMKGL-----GA-------RVYITEIDPI---- 291 (479)
T ss_dssp HHHHHHHHHHHHHH---HHHHCCCCTT---SEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSCHH----
T ss_pred hchHhHHHHHhhhh---hhccccccCC---CEEEEEeeCHHHHHHHHHHHhC-----cC-------EEEEEeCChh----
Confidence 34555555556663 2567777777 9999999999999999998764 42 6888887421
Q ss_pred CCCCChhhhccccccCCcCCcCCCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCCCCCCCCC
Q 011618 374 RKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNGLFS 453 (481)
Q Consensus 374 r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~~ 453 (481)
... ..+... -...+|.|+++. .|++|.+....+.++++.++.|. +..||.=.|.... |
T Consensus 292 -----~~~-~a~~~g------~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK----~gailiNvgrg~~--E-- 349 (479)
T 1v8b_A 292 -----CAI-QAVMEG------FNVVTLDEIVDK--GDFFITCTGNVDVIKLEHLLKMK----NNAVVGNIGHFDD--E-- 349 (479)
T ss_dssp -----HHH-HHHTTT------CEECCHHHHTTT--CSEEEECCSSSSSBCHHHHTTCC----TTCEEEECSSTTT--S--
T ss_pred -----hHH-HHHHcC------CEecCHHHHHhc--CCEEEECCChhhhcCHHHHhhcC----CCcEEEEeCCCCc--c--
Confidence 000 111110 012469999987 99999997778999999999993 5778887886544 6
Q ss_pred CCHHHHHh
Q 011618 454 CCVTTFFF 461 (481)
Q Consensus 454 ~t~eda~~ 461 (481)
+.-++..+
T Consensus 350 Id~~aL~~ 357 (479)
T 1v8b_A 350 IQVNELFN 357 (479)
T ss_dssp BCHHHHHT
T ss_pred ccchhhhc
Confidence 66676666
No 29
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=95.35 E-value=0.022 Score=57.21 Aligned_cols=139 Identities=14% Similarity=0.199 Sum_probs=93.4
Q ss_pred HHHHHHHHHhC--Cce---EEEeecCCCchHHHHHHHHh--hcCCccc----------cCcchhHHHHHHHHHHHHHHhC
Q 011618 253 DEFMEAVHARW--PKA---IVQFEDFQMKWAFETLERYR--KRFCMFN----------DDIQGTAGVALAGLLGTVRAQG 315 (481)
Q Consensus 253 defv~av~~~~--P~~---~IqfEDf~~~naf~iL~ryr--~~~~~FN----------DDiQGTaaV~LAgll~Alr~~g 315 (481)
+|+.+.+.+.. |++ ++|+==.+.-+..++++.-. +.+=.|| +...|-.-+|-.|++..++-.+
T Consensus 81 ~ell~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~p~KDVDG~~~~N~G~l~~g~~~~~~~PcTp~gv~~lL~~~~ 160 (300)
T 4a26_A 81 EVLEVNVEKLNNDPNCHGIIVQLPLPKHLNENRAIEKIHPHKDADALLPVNVGLLHYKGREPPFTPCTAKGVIVLLKRCG 160 (300)
T ss_dssp HHHHHHHHHHHTCTTCCEEEECSCCCTTSCHHHHHHTSCGGGCTTCCSHHHHHHHHCTTCCCSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCCEEEEcCCCCCCCCHHHHHhhCCcccccccCCcceEEEeecCCCcCCCCCCCHHHHHHHHHHcC
Confidence 67777777665 543 55553223333444444332 1222222 1133434567788999999999
Q ss_pred CCCCCCCCceEEEeCccH-HHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCc
Q 011618 316 LSLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGL 394 (481)
Q Consensus 316 ~~l~dl~~~riv~~GAGs-Ag~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~ 394 (481)
.+++. .++||+|+|. .|..+|.+|... | ..+.+++++ +
T Consensus 161 i~l~G---k~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~~~~-------T------------------- 199 (300)
T 4a26_A 161 IEMAG---KRAVVLGRSNIVGAPVAALLMKE-----N-------ATVTIVHSG-------T------------------- 199 (300)
T ss_dssp CCCTT---CEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT-------S-------------------
T ss_pred CCCCC---CEEEEECCCchHHHHHHHHHHHC-----C-------CeEEEEeCC-------C-------------------
Confidence 98888 9999999876 899999998763 3 258888762 0
Q ss_pred CCCCCHH--HHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecC
Q 011618 395 REGASLL--EVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMS 444 (481)
Q Consensus 395 ~~~~~L~--e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLS 444 (481)
.+|. +.++. +|++|...+.|+.+++++|+ +.-+|+=++
T Consensus 200 ---~~l~l~~~~~~--ADIVI~Avg~p~~I~~~~vk-------~GavVIDvg 239 (300)
T 4a26_A 200 ---STEDMIDYLRT--ADIVIAAMGQPGYVKGEWIK-------EGAAVVDVG 239 (300)
T ss_dssp ---CHHHHHHHHHT--CSEEEECSCCTTCBCGGGSC-------TTCEEEECC
T ss_pred ---CCchhhhhhcc--CCEEEECCCCCCCCcHHhcC-------CCcEEEEEe
Confidence 1255 88988 99999999999999998874 445776554
No 30
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=95.15 E-value=0.018 Score=58.14 Aligned_cols=114 Identities=14% Similarity=0.176 Sum_probs=77.5
Q ss_pred HHHHHHHHHHH---------hCCCCCCCCCceEEEeCccH-HHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeec
Q 011618 303 ALAGLLGTVRA---------QGLSLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITK 372 (481)
Q Consensus 303 ~LAgll~Alr~---------~g~~l~dl~~~riv~~GAGs-Ag~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~ 372 (481)
|-.|.+-.++. .|.++.. .++||+|+|. .|.-+|.++... | .+++++|++..-..
T Consensus 151 Tp~a~v~ll~~~~~~~~~~~~g~~l~g---k~vvVIG~G~iVG~~~A~~L~~~-----g-------AtVtv~nR~~~~l~ 215 (320)
T 1edz_A 151 TPLAIVKILEFLKIYNNLLPEGNRLYG---KKCIVINRSEIVGRPLAALLAND-----G-------ATVYSVDVNNIQKF 215 (320)
T ss_dssp HHHHHHHHHHHTTCSCTTSCTTCTTTT---CEEEEECCCTTTHHHHHHHHHTT-----S-------CEEEEECSSEEEEE
T ss_pred cHHHHHHHHHhhcccccccccCCCCCC---CEEEEECCCcchHHHHHHHHHHC-----C-------CEEEEEeCchHHHH
Confidence 33444566665 5666666 9999999995 598888887653 3 36999999766555
Q ss_pred CCC-CCChhhhccccccCCcCCcCCC--CCHHHHhcccCCcEEEeecCCCCC-CCHHHHHHhhhcCCCCCEEEecCCCC
Q 011618 373 ERK-NLDPAAAPFAKDPGDFMGLREG--ASLLEVVRKVKPHVLLGLSGVGGV-FNEEVLKAMRESDSVKPAIFAMSNPT 447 (481)
Q Consensus 373 ~r~-~l~~~k~~fA~~~~~~~~~~~~--~~L~e~V~~vkptvLIG~S~~~g~-Ft~evv~~Ma~~~~erPIIFaLSNPt 447 (481)
.|. .+... ++..... ... .+|.++++. +|++|+..+.++. +|+++|+ +.-+|+-++.|-
T Consensus 216 ~ra~~la~~----~~~~t~~---~~t~~~~L~e~l~~--ADIVIsAtg~p~~vI~~e~vk-------~GavVIDVgi~r 278 (320)
T 1edz_A 216 TRGESLKLN----KHHVEDL---GEYSEDLLKKCSLD--SDVVITGVPSENYKFPTEYIK-------EGAVCINFACTK 278 (320)
T ss_dssp ESCCCSSCC----CCEEEEE---EECCHHHHHHHHHH--CSEEEECCCCTTCCBCTTTSC-------TTEEEEECSSSC
T ss_pred hHHHHHhhh----ccccccc---ccccHhHHHHHhcc--CCEEEECCCCCcceeCHHHcC-------CCeEEEEcCCCc
Confidence 553 23210 1110000 001 469999999 9999999999998 9999874 345899999875
No 31
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=95.09 E-value=0.24 Score=51.77 Aligned_cols=193 Identities=14% Similarity=0.119 Sum_probs=117.0
Q ss_pred CChhhhhHhHHHHHHHHHHhC-CceEEEeecCCCch--HHHHHHHHhhcC------Ccc----------ccCcchhHHHH
Q 011618 243 LEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKW--AFETLERYRKRF------CMF----------NDDIQGTAGVA 303 (481)
Q Consensus 243 ~~g~~Y~~~vdefv~av~~~~-P~~~IqfEDf~~~n--af~iL~ryr~~~------~~F----------NDDiQGTaaV~ 303 (481)
.+..|-..|...|+.++...- |..-|-=+|++..- ---+.++|+... .++ .+.-.-||-=+
T Consensus 116 ~s~~el~r~~r~f~~~l~~~iG~~~dvpA~Dvgt~~~~m~~~~~~y~~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv 195 (421)
T 2yfq_A 116 LSERELEQLSRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYVKLNGERMDIGTFTGKPVAFGGSEGRNEATGFGV 195 (421)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEEEEECTTCCHHHHHHHHHHHHHHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCCEEecCchhcCCCCCCCcchHHHH
Confidence 345667778899999998877 88888999999752 224667775321 122 22223466666
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc-----ceeecCCCCCC
Q 011618 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD-----GLITKERKNLD 378 (481)
Q Consensus 304 LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~-----GLi~~~r~~l~ 378 (481)
.-++-.+++..|.+|+. .||+|.|.|..|...|++|.+. |. +-+-+.|++ |-|.+.. .|+
T Consensus 196 ~~~~~~~~~~~g~~l~g---~~vaVqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~~~~~~G~i~d~~-Gld 260 (421)
T 2yfq_A 196 AVVVRESAKRFGIKMED---AKIAVQGFGNVGTFTVKNIERQ-----GG------KVCAIAEWDRNEGNYALYNEN-GID 260 (421)
T ss_dssp HHHHHHHHHHTTCCGGG---SCEEEECCSHHHHHHHHHHHHT-----TC------CEEECCBCCSSSCSBCCBCSS-CCC
T ss_pred HHHHHHHHHhcCCCccC---CEEEEECcCHHHHHHHHHHHHC-----CC------EEEEEEecCCCccceEEECCC-CCC
Confidence 66777888888887777 9999999999999999988753 42 334499999 9998764 343
Q ss_pred hhh-hccccccCCcCCcC--CCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCCCCCCCCCCC
Q 011618 379 PAA-APFAKDPGDFMGLR--EGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNGLFSCC 455 (481)
Q Consensus 379 ~~k-~~fA~~~~~~~~~~--~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~~~t 455 (481)
... ..+......+.+-+ ...+-.+ +-.+++||||=+.. ++.+|++-.+.+ ...+|.--+|--.-.|
T Consensus 261 ~~~l~~~~~~~g~i~~~~~a~~i~~~~-~~~~~~DIliP~A~-~n~i~~~~A~~l-----~ak~VvEgAN~P~t~e---- 329 (421)
T 2yfq_A 261 FKELLAYKEANKTLIGFPGAERITDEE-FWTKEYDIIVPAAL-ENVITGERAKTI-----NAKLVCEAANGPTTPE---- 329 (421)
T ss_dssp HHHHHHHHHHHCC----------------------CEEECSC-SSCSCHHHHTTC-----CCSEEECCSSSCSCHH----
T ss_pred HHHHHHHHHhcCCcccCCCceEeCccc-hhcCCccEEEEcCC-cCcCCcccHHHc-----CCeEEEeCCccccCHH----
Confidence 321 11111111100000 0111122 34578999998875 799999998877 3567776666433234
Q ss_pred HHHHHh
Q 011618 456 VTTFFF 461 (481)
Q Consensus 456 ~eda~~ 461 (481)
+++.++
T Consensus 330 a~~il~ 335 (421)
T 2yfq_A 330 GDKVLT 335 (421)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555554
No 32
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=94.98 E-value=0.17 Score=51.70 Aligned_cols=139 Identities=22% Similarity=0.303 Sum_probs=79.7
Q ss_pred hHHHHHHHHhhcCCccccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhh
Q 011618 277 WAFETLERYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAF 356 (481)
Q Consensus 277 naf~iL~ryr~~~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~ee 356 (481)
.++.+-++.+...... .++.+++.+++--+-+..+ ++.. .+|+|+|||..|..+|+.+... |.
T Consensus 129 ~a~~~~k~v~~~~~~~----~~~~s~a~~av~~a~~~~~-~l~g---~~VlIiGaG~iG~~~a~~l~~~-----G~---- 191 (404)
T 1gpj_A 129 RAINLGKRAREETRIS----EGAVSIGSAAVELAERELG-SLHD---KTVLVVGAGEMGKTVAKSLVDR-----GV---- 191 (404)
T ss_dssp HHHHHHHHHHHHSSTT----CSCCSHHHHHHHHHHHHHS-CCTT---CEEEEESCCHHHHHHHHHHHHH-----CC----
T ss_pred HHhhhhccCcchhhhc----CCCccHHHHHHHHHHHHhc-cccC---CEEEEEChHHHHHHHHHHHHHC-----CC----
Confidence 3677777766553222 1222233333322222222 3444 8999999999999999887653 53
Q ss_pred hcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHHhcccCCcEEEeecCCC-CCCCHHHHHH--hhhc
Q 011618 357 ARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVG-GVFNEEVLKA--MRES 433 (481)
Q Consensus 357 A~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~-g~Ft~evv~~--Ma~~ 433 (481)
++|+++|+.. .+ . ..+|+.... . .-...++.++++. .|++|-+++.+ ..++++.++. |..+
T Consensus 192 --~~V~v~~r~~----~r--a----~~la~~~g~-~-~~~~~~l~~~l~~--aDvVi~at~~~~~~~~~~~l~~~~lk~r 255 (404)
T 1gpj_A 192 --RAVLVANRTY----ER--A----VELARDLGG-E-AVRFDELVDHLAR--SDVVVSATAAPHPVIHVDDVREALRKRD 255 (404)
T ss_dssp --SEEEEECSSH----HH--H----HHHHHHHTC-E-ECCGGGHHHHHHT--CSEEEECCSSSSCCBCHHHHHHHHHHCS
T ss_pred --CEEEEEeCCH----HH--H----HHHHHHcCC-c-eecHHhHHHHhcC--CCEEEEccCCCCceecHHHHHHHHHhcc
Confidence 4788888731 11 1 123321100 0 0012358888876 89999877654 4568888987 4211
Q ss_pred CCCCCEEEecCCCCC
Q 011618 434 DSVKPAIFAMSNPTM 448 (481)
Q Consensus 434 ~~erPIIFaLSNPt~ 448 (481)
...+-+++-++.|.+
T Consensus 256 ~~~~~v~vdia~P~~ 270 (404)
T 1gpj_A 256 RRSPILIIDIANPRD 270 (404)
T ss_dssp SCCCEEEEECCSSCS
T ss_pred CCCCEEEEEccCCCC
Confidence 234557788998864
No 33
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=94.57 E-value=0.023 Score=55.86 Aligned_cols=111 Identities=12% Similarity=0.193 Sum_probs=64.8
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhcc
Q 011618 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPF 384 (481)
Q Consensus 305 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~f 384 (481)
.|++.+++..+.+++. .+++|+|||.+|.+||..|.. .|. ++|+++++. .++ -+.+
T Consensus 102 ~G~~~~L~~~~~~l~~---k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~----~~~------a~~l 157 (277)
T 3don_A 102 IGYVNGLKQIYEGIED---AYILILGAGGASKGIANELYK-----IVR------PTLTVANRT----MSR------FNNW 157 (277)
T ss_dssp HHHHHHHHHHSTTGGG---CCEEEECCSHHHHHHHHHHHT-----TCC------SCCEEECSC----GGG------GTTC
T ss_pred HHHHHHHHHhCCCcCC---CEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHH------HHHH
Confidence 4577788888877777 999999999888888777664 454 478888874 122 1112
Q ss_pred ccccCCcCCcCCCCCHHHHhcccCCcEEEeecCCCCCCCH--HHHHHhhhcCCCCCEEEecC-CCCC
Q 011618 385 AKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNE--EVLKAMRESDSVKPAIFAMS-NPTM 448 (481)
Q Consensus 385 A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~--evv~~Ma~~~~erPIIFaLS-NPt~ 448 (481)
+..... ....++.++++. +|++|-++.. |.... +.+. . +...+..+|+=++ ||..
T Consensus 158 a~~~~~----~~~~~~~~~~~~--aDiVInaTp~-Gm~~~~~~~l~-~-~~l~~~~~V~D~vY~P~~ 215 (277)
T 3don_A 158 SLNINK----INLSHAESHLDE--FDIIINTTPA-GMNGNTDSVIS-L-NRLASHTLVSDIVYNPYK 215 (277)
T ss_dssp CSCCEE----ECHHHHHHTGGG--CSEEEECCC--------CCSSC-C-TTCCSSCEEEESCCSSSS
T ss_pred HHhccc----ccHhhHHHHhcC--CCEEEECccC-CCCCCCcCCCC-H-HHcCCCCEEEEecCCCCC
Confidence 211100 012346666766 8999977653 32211 1111 1 1134677888885 8743
No 34
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=94.54 E-value=0.61 Score=49.50 Aligned_cols=179 Identities=14% Similarity=0.109 Sum_probs=117.8
Q ss_pred ChhhhhHhHHHHHHHHHHhC-CceEEEeecCCCch--HHHHHHHHhhc--C--Ccc----------ccCcchhHHHHHHH
Q 011618 244 EGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKW--AFETLERYRKR--F--CMF----------NDDIQGTAGVALAG 306 (481)
Q Consensus 244 ~g~~Y~~~vdefv~av~~~~-P~~~IqfEDf~~~n--af~iL~ryr~~--~--~~F----------NDDiQGTaaV~LAg 306 (481)
+..|...|...||..+.+.. |..-|-=+|++..- ---+.+.|+.. . .|+ .++-.-||-=+.-+
T Consensus 159 S~~El~r~~r~f~~~L~~~iGp~~DvpApDvGt~~~em~~~~~~y~~~~~~~~gvvTGKp~~~GGs~~r~~aTg~Gv~~~ 238 (470)
T 2bma_A 159 SDNEILKFCQAFMNELYRHIGPCTDVPAGDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVYF 238 (470)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCSSCCHHHHHHHHHHHHHHHCCCSCSSSSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhccCCCCCccCCCCCCChHHHHHHHHHHHHhcCCcccEEeCCCccCCCCCCccccchHHHHHH
Confidence 45666778888888888655 88788889998742 12355677642 1 111 11223466555666
Q ss_pred HHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEE-EEeccceeecCCCCCChhh----
Q 011618 307 LLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFF-LLDKDGLITKERKNLDPAA---- 381 (481)
Q Consensus 307 ll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~-lvD~~GLi~~~r~~l~~~k---- 381 (481)
+-.+++..|.+|+. .||+|-|.|..|...|+.|.+. |. +++ +.|++|-|.... .++...
T Consensus 239 ~~~~l~~~G~~l~g---~~vaVqG~GnVG~~~a~~L~~~-----Ga-------kvVavsD~~G~i~dp~-Gid~edl~~l 302 (470)
T 2bma_A 239 VLEVLKSLNIPVEK---QTAVVSGSGNVALYCVQKLLHL-----NV-------KVLTLSDSNGYVYEPN-GFTHENLEFL 302 (470)
T ss_dssp HHHHHHTTTCCGGG---CEEEEECSSHHHHHHHHHHHHT-----TC-------EECEEEETTEEEECSS-CCCHHHHHHH
T ss_pred HHHHHHhccCCcCC---CEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEEeCCceEECCC-CCCHHHHHHH
Confidence 77788888877666 9999999999999999998764 42 455 999999988754 353331
Q ss_pred -----------hccccccCCcCCcCCCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCC
Q 011618 382 -----------APFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNP 446 (481)
Q Consensus 382 -----------~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNP 446 (481)
..|+...+.. ...+-.+. -.++.||||=+.. ++.+|++-++.+.+ |...+|.--+|=
T Consensus 303 ~~~k~~~~g~v~~~~~~~~~a----~~v~~~~~-~~~~~DI~iPcA~-~~~I~~~na~~l~~--~~ak~V~EgAN~ 370 (470)
T 2bma_A 303 IDLKEEKKGRIKEYLNHSSTA----KYFPNEKP-WGVPCTLAFPCAT-QNDVDLDQAKLLQK--NGCILVGEGANM 370 (470)
T ss_dssp HHHHTTTTCCGGGGGGTCSSC----EECSSCCT-TSSCCSEEEECSS-TTCBCSHHHHHHHH--TTCCEEECCSSS
T ss_pred HHHHHhcCCcHHHHHhhcCCc----EEecCcCe-eecCccEEEeccc-cCcCCHHHHHHHHh--cCcEEEEeCCCC
Confidence 1122100000 00000122 2578999998885 79999999999953 567799988884
No 35
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=94.43 E-value=0.029 Score=56.38 Aligned_cols=101 Identities=23% Similarity=0.323 Sum_probs=63.1
Q ss_pred CCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCC
Q 011618 320 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGAS 399 (481)
Q Consensus 320 dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~ 399 (481)
.++..+++|+|||.+|.+++..+... |. +++++|++ .. .+...+..++....-.. ....+
T Consensus 164 ~l~~~~VlViGaGgvG~~aa~~a~~~-----Ga-------~V~v~dr~----~~--r~~~~~~~~~~~~~~~~--~~~~~ 223 (361)
T 1pjc_A 164 GVKPGKVVILGGGVVGTEAAKMAVGL-----GA-------QVQIFDIN----VE--RLSYLETLFGSRVELLY--SNSAE 223 (361)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESC----HH--HHHHHHHHHGGGSEEEE--CCHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEeCC----HH--HHHHHHHhhCceeEeee--CCHHH
Confidence 35558999999999999998887643 42 68888874 11 12222222222100000 01124
Q ss_pred HHHHhcccCCcEEEeecCCCCC-----CCHHHHHHhhhcCCCCCEEEecCCC
Q 011618 400 LLEVVRKVKPHVLLGLSGVGGV-----FNEEVLKAMRESDSVKPAIFAMSNP 446 (481)
Q Consensus 400 L~e~V~~vkptvLIG~S~~~g~-----Ft~evv~~Ma~~~~erPIIFaLSNP 446 (481)
+.+.++. .|++|.+.+.++. ++++.++.|. +.-+|+-++.+
T Consensus 224 ~~~~~~~--~DvVI~~~~~~~~~~~~li~~~~~~~~~----~g~~ivdv~~~ 269 (361)
T 1pjc_A 224 IETAVAE--ADLLIGAVLVPGRRAPILVPASLVEQMR----TGSVIVDVAVD 269 (361)
T ss_dssp HHHHHHT--CSEEEECCCCTTSSCCCCBCHHHHTTSC----TTCEEEETTCT
T ss_pred HHHHHcC--CCEEEECCCcCCCCCCeecCHHHHhhCC----CCCEEEEEecC
Confidence 7777775 8999998876553 6888898884 45577777753
No 36
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=94.40 E-value=0.046 Score=54.47 Aligned_cols=143 Identities=16% Similarity=0.218 Sum_probs=95.1
Q ss_pred HHHHHHHHHhC--Cc---eEEEeecCCCchHHHHHHHHh--hcCCccccC--------cchhHHHHHHHHHHHHHHhCCC
Q 011618 253 DEFMEAVHARW--PK---AIVQFEDFQMKWAFETLERYR--KRFCMFNDD--------IQGTAGVALAGLLGTVRAQGLS 317 (481)
Q Consensus 253 defv~av~~~~--P~---~~IqfEDf~~~naf~iL~ryr--~~~~~FNDD--------iQGTaaV~LAgll~Alr~~g~~ 317 (481)
+|+.+.+.++- |+ .++|+==.+.-+..++++.-. +.+=.||.- ..+-.-+|-.|++-.++..+.+
T Consensus 76 ~ell~~i~~lN~D~~v~GIlvqlPlP~~id~~~i~~~I~p~KDVDG~~p~n~g~l~~g~~~~~PcTp~gi~~ll~~~~i~ 155 (281)
T 2c2x_A 76 ATLNETIDELNANPDCTGYIVQLPLPKHLDENAALERVDPAKDADGLHPTNLGRLVLGTPAPLPCTPRGIVHLLRRYDIS 155 (281)
T ss_dssp HHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCGGGBTTSCCHHHHHHHHHTCCCCCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCCCCCCHHHHHhhcCccCCccCCChhhHHHHhCCCCCCCCChHHHHHHHHHHcCCC
Confidence 56666665554 64 367764444445555555432 122222210 1233456777788888999888
Q ss_pred CCCCCCceEEEeCccH-HHHHHHHHHHHHHHHHc-CCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcC
Q 011618 318 LTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMA-GNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLR 395 (481)
Q Consensus 318 l~dl~~~riv~~GAGs-Ag~GiA~ll~~~~~~~~-Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~ 395 (481)
++. .++||+|+|. .|.-+|.++... . | ..+++++++
T Consensus 156 l~g---k~vvVvG~s~iVG~p~A~lL~~~----g~~-------atVtv~h~~---------------------------- 193 (281)
T 2c2x_A 156 IAG---AHVVVIGRGVTVGRPLGLLLTRR----SEN-------ATVTLCHTG---------------------------- 193 (281)
T ss_dssp CTT---CEEEEECCCTTTHHHHHHHHTST----TTC-------CEEEEECTT----------------------------
T ss_pred CCC---CEEEEECCCcHHHHHHHHHHhcC----CCC-------CEEEEEECc----------------------------
Confidence 777 9999999996 588888877542 1 2 357777431
Q ss_pred CCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCCC
Q 011618 396 EGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPT 447 (481)
Q Consensus 396 ~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt 447 (481)
..+|.+.++. +|++|+..+.|+.+|+|+|+ +.-+|+=++-|-
T Consensus 194 -t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk-------~GavVIDVgi~r 235 (281)
T 2c2x_A 194 -TRDLPALTRQ--ADIVVAAVGVAHLLTADMVR-------PGAAVIDVGVSR 235 (281)
T ss_dssp -CSCHHHHHTT--CSEEEECSCCTTCBCGGGSC-------TTCEEEECCEEE
T ss_pred -hhHHHHHHhh--CCEEEECCCCCcccCHHHcC-------CCcEEEEccCCC
Confidence 1349999988 99999999999999999874 345888777653
No 37
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=94.38 E-value=0.11 Score=55.37 Aligned_cols=111 Identities=21% Similarity=0.283 Sum_probs=77.0
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCC
Q 011618 298 GTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNL 377 (481)
Q Consensus 298 GTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l 377 (481)
|+......|+ .+.+|..+.. .+++|+|.|..|.++|+.+... |+ +++.+|++..
T Consensus 258 ~~~~~l~~gw---~~~~g~~L~G---ktVgIIG~G~IG~~vA~~l~~~-----G~-------~V~v~d~~~~-------- 311 (494)
T 3d64_A 258 GCRESLVDGI---KRATDVMIAG---KIAVVAGYGDVGKGCAQSLRGL-----GA-------TVWVTEIDPI-------- 311 (494)
T ss_dssp HHHTTHHHHH---HHHHCCCCTT---CEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECSCHH--------
T ss_pred hhhhhhhhhh---hhccccccCC---CEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEEeCChH--------
Confidence 3444445552 3567877777 9999999999999999988643 42 6888887421
Q ss_pred ChhhhccccccCCcCCcCCCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 378 DPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 378 ~~~k~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
... . +.... ....+|.|+++. .|++|......++++++.++.|. +..||.=.|....
T Consensus 312 -~~~-~-a~~~G-----~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK----~gAilINvgrg~v 368 (494)
T 3d64_A 312 -CAL-Q-AAMEG-----YRVVTMEYAADK--ADIFVTATGNYHVINHDHMKAMR----HNAIVCNIGHFDS 368 (494)
T ss_dssp -HHH-H-HHTTT-----CEECCHHHHTTT--CSEEEECSSSSCSBCHHHHHHCC----TTEEEEECSSSSC
T ss_pred -hHH-H-HHHcC-----CEeCCHHHHHhc--CCEEEECCCcccccCHHHHhhCC----CCcEEEEcCCCcc
Confidence 000 0 11100 012469999987 99999987668999999999993 5678887776544
No 38
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=94.21 E-value=0.23 Score=52.75 Aligned_cols=109 Identities=17% Similarity=0.203 Sum_probs=75.1
Q ss_pred HHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCc
Q 011618 312 RAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDF 391 (481)
Q Consensus 312 r~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~ 391 (481)
|..+..+.. .+|+|+|+|..|.++|+.+... |. +++.+|++ +.+...|+...
T Consensus 266 r~~~~~l~G---ktV~IiG~G~IG~~~A~~lka~-----Ga-------~Viv~d~~-----------~~~~~~A~~~G-- 317 (494)
T 3ce6_A 266 RGTDALIGG---KKVLICGYGDVGKGCAEAMKGQ-----GA-------RVSVTEID-----------PINALQAMMEG-- 317 (494)
T ss_dssp HHHCCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC-----------HHHHHHHHHTT--
T ss_pred hccCCCCCc---CEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEEeCC-----------HHHHHHHHHcC--
Confidence 345555666 9999999999999999887643 42 68888763 22222232211
Q ss_pred CCcCCCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCCCCCCCCCCCHHHHHh
Q 011618 392 MGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNGLFSCCVTTFFF 461 (481)
Q Consensus 392 ~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~~~t~eda~~ 461 (481)
.+..++.|+++. .|++|-+++..++++++.++.|. +.-+|.-.+.... | +..+..+.
T Consensus 318 ---a~~~~l~e~l~~--aDvVi~atgt~~~i~~~~l~~mk----~ggilvnvG~~~~--e--Id~~aL~~ 374 (494)
T 3ce6_A 318 ---FDVVTVEEAIGD--ADIVVTATGNKDIIMLEHIKAMK----DHAILGNIGHFDN--E--IDMAGLER 374 (494)
T ss_dssp ---CEECCHHHHGGG--CSEEEECSSSSCSBCHHHHHHSC----TTCEEEECSSSGG--G--BCHHHHHH
T ss_pred ---CEEecHHHHHhC--CCEEEECCCCHHHHHHHHHHhcC----CCcEEEEeCCCCC--c--cCHHHHHH
Confidence 012468888876 89999988878899999999993 5667777777654 6 65655544
No 39
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.49 E-value=0.062 Score=53.63 Aligned_cols=107 Identities=15% Similarity=0.184 Sum_probs=66.0
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecC-CCCCChhhhccccccCCcCCcCCCCCHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (481)
.||.|+|||+.|.++|.++... |+- +++++|.+-=..+. ..++.+...++..+ ... ....++.+
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-----g~~------~V~L~D~~~~~~~~~~~~l~~~~~~~~~~-~~i---~~t~d~~e 74 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-----ELA------DVVLYDVVKGMPEGKALDLSHVTSVVDTN-VSV---RAEYSYEA 74 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC------EEEEECSSSSHHHHHHHHHHHHHHHTTCC-CCE---EEECSHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC------eEEEEECChhHHHHHHHHHHhhhhccCCC-CEE---EEeCCHHH
Confidence 5899999999999999888753 431 39999985210000 00111111111111 000 11367988
Q ss_pred HhcccCCcEEEeecCCC---CC----------------CCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 403 VVRKVKPHVLLGLSGVG---GV----------------FNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 403 ~V~~vkptvLIG~S~~~---g~----------------Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
++++ +|++|=+.+.| |. .-+++.+.|.+ ++..-+|+=-|||..
T Consensus 75 a~~~--aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~vi~~tNP~~ 136 (331)
T 1pzg_A 75 ALTG--ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKK-YCPKTFIIVVTNPLD 136 (331)
T ss_dssp HHTT--CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHH-HCTTCEEEECCSSHH
T ss_pred HhCC--CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHH-HCCCcEEEEEcCchH
Confidence 9988 89998655433 33 14677888864 788888888899987
No 40
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=93.49 E-value=2.3 Score=43.36 Aligned_cols=164 Identities=20% Similarity=0.214 Sum_probs=101.5
Q ss_pred CChhhhhHhHHHHHHHHHHhCCceEEEeecCCCchH--HHHHHHHhhc--CC-cc---ccCcchhHHHHHHHHHHHHHHh
Q 011618 243 LEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWA--FETLERYRKR--FC-MF---NDDIQGTAGVALAGLLGTVRAQ 314 (481)
Q Consensus 243 ~~g~~Y~~~vdefv~av~~~~P~~~IqfEDf~~~na--f~iL~ryr~~--~~-~F---NDDiQGTaaV~LAgll~Alr~~ 314 (481)
++..+-++++..|.+++..+.-. -|-=+|++..-. --+.++|+-- -| .+ .|=-.-||-=+.-++-.+++..
T Consensus 90 ~s~~~~e~~~r~~~~~~~~l~g~-~ipa~D~gt~~~~m~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~ 168 (355)
T 1c1d_A 90 IDPSTWARILRIHAENIDKLSGN-YWTGPDVNTNSADMDTLNDTTEFVFGRSLERGGAGSSAFTTAVGVFEAMKATVAHR 168 (355)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTTS-EEEEECTTCCHHHHHHHHHHCSCBCCCCGGGTSCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred cChhhHHHHHHHHHHHHHHhcCC-cccCCCCCCCHHHHHHHHHhcCeeeccchhhCCCCCchhHHHHHHHHHHHHHHHhc
Confidence 33455567888888888887522 578889976421 1234444411 01 11 1111235555556677778888
Q ss_pred CC-CCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCC
Q 011618 315 GL-SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMG 393 (481)
Q Consensus 315 g~-~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~ 393 (481)
|. .|+. .+++|.|.|..|..+|+.+... |. ++++.|++ .....+++...
T Consensus 169 G~~~L~G---ktV~I~G~GnVG~~~A~~l~~~-----Ga-------kVvvsD~~-----------~~~~~~a~~~g---- 218 (355)
T 1c1d_A 169 GLGSLDG---LTVLVQGLGAVGGSLASLAAEA-----GA-------QLLVADTD-----------TERVAHAVALG---- 218 (355)
T ss_dssp TCCCSTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC-----------HHHHHHHHHTT----
T ss_pred CCCCCCC---CEEEEECcCHHHHHHHHHHHHC-----CC-------EEEEEeCC-----------ccHHHHHHhcC----
Confidence 86 6666 9999999999999999987653 53 67788864 11122332111
Q ss_pred cCCCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCC
Q 011618 394 LREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (481)
Q Consensus 394 ~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSN 445 (481)
....++.|..+ ++.|+++=+. ..+.++++-++.| ...||.--+|
T Consensus 219 -a~~v~~~ell~-~~~DIliP~A-~~~~I~~~~~~~l-----k~~iVie~AN 262 (355)
T 1c1d_A 219 -HTAVALEDVLS-TPCDVFAPCA-MGGVITTEVARTL-----DCSVVAGAAN 262 (355)
T ss_dssp -CEECCGGGGGG-CCCSEEEECS-CSCCBCHHHHHHC-----CCSEECCSCT
T ss_pred -CEEeChHHhhc-CccceecHhH-HHhhcCHHHHhhC-----CCCEEEECCC
Confidence 01123444433 4689998654 4789999999999 2468887776
No 41
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=93.46 E-value=1.1 Score=46.64 Aligned_cols=182 Identities=14% Similarity=0.143 Sum_probs=117.3
Q ss_pred ChhhhhHhHHHHHHHHHHhC-CceEEEeecCCCch--HHHHHHHHhhc-----CCcccc----------CcchhHHHHHH
Q 011618 244 EGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKW--AFETLERYRKR-----FCMFND----------DIQGTAGVALA 305 (481)
Q Consensus 244 ~g~~Y~~~vdefv~av~~~~-P~~~IqfEDf~~~n--af~iL~ryr~~-----~~~FND----------DiQGTaaV~LA 305 (481)
+.+|-..+...|+.++...- |..-|-=+|++..- ---+.+.|+.. ..++-- --.-||-=+.-
T Consensus 115 s~~e~~r~~r~f~~~l~~~ig~~~dvpa~D~gt~~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~ 194 (415)
T 2tmg_A 115 SRRELERLSRRFFREIQVIIGPYNDIPAPDVNTNADVIAWYMDEYEMNVGHTVLGIVTGKPVELGGSKGREEATGRGVKV 194 (415)
T ss_dssp CHHHHHHHHHHHHHHTGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCcEEeCCCCCCCHHHHHHHHHHHHHhhCCCCCCeEecCchhhCCCCCcCcchHHHHHH
Confidence 44566778899999998877 78788889998752 22345666431 123322 22335555556
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhh-hcc
Q 011618 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAA-APF 384 (481)
Q Consensus 306 gll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k-~~f 384 (481)
++-.+++..|.+++. .||+|.|.|..|...|++|.+ +.|. +=+-+.|++|-+.+.. .|+... ..+
T Consensus 195 ~~~~~~~~~g~~l~g---~~vaVqG~GnVG~~~a~~L~e----~~Ga------kvVavsD~~G~i~dp~-Gld~~~l~~~ 260 (415)
T 2tmg_A 195 CAGLAMDVLGIDPKK---ATVAVQGFGNVGQFAALLISQ----ELGS------KVVAVSDSRGGIYNPE-GFDVEELIRY 260 (415)
T ss_dssp HHHHHHHHTTCCTTT---CEEEEECCSHHHHHHHHHHHH----TTCC------EEEEEECSSCEEECTT-CCCHHHHHHH
T ss_pred HHHHHHHHcCCCcCC---CEEEEECCcHHHHHHHHHHHH----hcCC------EEEEEEeCCCeEECCC-CCCHHHHHHH
Confidence 677788888987777 999999999999999988865 1342 2344999999988764 344322 112
Q ss_pred ccccCCcCCcC--CCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCC
Q 011618 385 AKDPGDFMGLR--EGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNP 446 (481)
Q Consensus 385 A~~~~~~~~~~--~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNP 446 (481)
......+.+-. ...+-.| +-.+++|+||=+.. ++..|++-.+.+ ...+|.--+|-
T Consensus 261 ~~~~g~l~~y~~a~~~~~~e-il~~~~DIliP~A~-~n~i~~~~a~~l-----~ak~V~EgAN~ 317 (415)
T 2tmg_A 261 KKEHGTVVTYPKGERITNEE-LLELDVDILVPAAL-EGAIHAGNAERI-----KAKAVVEGANG 317 (415)
T ss_dssp HHHSSCSTTCSSSEEECHHH-HTTCSCSEEEECSS-TTSBCHHHHTTC-----CCSEEECCSSS
T ss_pred HHhhCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccCcccHHHc-----CCeEEEeCCCc
Confidence 21111111000 1113344 45678999998876 789999988877 35577777774
No 42
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=93.35 E-value=0.083 Score=52.15 Aligned_cols=49 Identities=16% Similarity=0.309 Sum_probs=40.0
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 305 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.|++.+++..+.+++. .+++|+|||.||.+++..|.+. |. ++|+++++.
T Consensus 107 ~G~~~~L~~~~~~~~~---k~vlvlGaGGaaraia~~L~~~-----G~------~~v~v~nRt 155 (282)
T 3fbt_A 107 IGFGKMLSKFRVEIKN---NICVVLGSGGAARAVLQYLKDN-----FA------KDIYVVTRN 155 (282)
T ss_dssp HHHHHHHHHTTCCCTT---SEEEEECSSTTHHHHHHHHHHT-----TC------SEEEEEESC
T ss_pred HHHHHHHHHcCCCccC---CEEEEECCcHHHHHHHHHHHHc-----CC------CEEEEEeCC
Confidence 6889999888888777 9999999998888888777653 53 579988873
No 43
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=93.34 E-value=0.095 Score=51.45 Aligned_cols=142 Identities=15% Similarity=0.133 Sum_probs=77.2
Q ss_pred HHHHHHHHHHhCCce-EEEeecCCCchHHHHHHHHhhc------C-Ccccc-C--cchhHHHHHHHHHHHHHHhCCCCCC
Q 011618 252 VDEFMEAVHARWPKA-IVQFEDFQMKWAFETLERYRKR------F-CMFND-D--IQGTAGVALAGLLGTVRAQGLSLTD 320 (481)
Q Consensus 252 vdefv~av~~~~P~~-~IqfEDf~~~naf~iL~ryr~~------~-~~FND-D--iQGTaaV~LAgll~Alr~~g~~l~d 320 (481)
+++|++.++. +++ +++.-==-...++++|++.-+. + ++.++ | ..|.-.= -.|++.+++..+.+++.
T Consensus 51 l~~~~~~~~~--~~~~G~nVTiP~K~~v~~~lD~l~~~A~~iGAVNTv~~~~~g~l~G~NTD-~~G~~~~l~~~~~~l~~ 127 (283)
T 3jyo_A 51 LKTLLDAALY--LGFNGLNITHPYKQAVLPLLDEVSEQATQLGAVNTVVIDATGHTTGHNTD-VSGFGRGMEEGLPNAKL 127 (283)
T ss_dssp HHHHHHHHHH--TTCCEEEECTTCTTTTGGGSSEECHHHHHHTCCCEEEECTTSCEEEECHH-HHHHHHHHHHHCTTCCC
T ss_pred HHHHHHHHhh--CCCCEEEECcccHHHHHHHhhhCCHHHHHhCcceEEEECCCCeEEEecCC-HHHHHHHHHHhCcCcCC
Confidence 5666666654 332 4433322233455555543321 1 33444 3 2342111 35788888888877777
Q ss_pred CCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCC-cCCCCC
Q 011618 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMG-LREGAS 399 (481)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~-~~~~~~ 399 (481)
.+++|+|||.+|.+++..|.. .|. ++|+++|+. .++ .....+.+........- .....+
T Consensus 128 ---k~vlVlGaGG~g~aia~~L~~-----~G~------~~v~i~~R~----~~~--a~~la~~~~~~~~~~~i~~~~~~~ 187 (283)
T 3jyo_A 128 ---DSVVQVGAGGVGNAVAYALVT-----HGV------QKLQVADLD----TSR--AQALADVINNAVGREAVVGVDARG 187 (283)
T ss_dssp ---SEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSS----HHH--HHHHHHHHHHHHTSCCEEEECSTT
T ss_pred ---CEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEECC----HHH--HHHHHHHHHhhcCCceEEEcCHHH
Confidence 999999999777777766654 354 579988874 111 11111122111000000 001236
Q ss_pred HHHHhcccCCcEEEeecCC
Q 011618 400 LLEVVRKVKPHVLLGLSGV 418 (481)
Q Consensus 400 L~e~V~~vkptvLIG~S~~ 418 (481)
|.++++. +|++|-++..
T Consensus 188 l~~~l~~--~DiVInaTp~ 204 (283)
T 3jyo_A 188 IEDVIAA--ADGVVNATPM 204 (283)
T ss_dssp HHHHHHH--SSEEEECSST
T ss_pred HHHHHhc--CCEEEECCCC
Confidence 8888887 8999987764
No 44
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=93.30 E-value=0.053 Score=57.17 Aligned_cols=35 Identities=14% Similarity=0.161 Sum_probs=26.9
Q ss_pred HHHHHHhhhcCCCCCEEEecCCCCCCCCCCCCHHHHHhccc
Q 011618 424 EEVLKAMRESDSVKPAIFAMSNPTMNGLFSCCVTTFFFYLM 464 (481)
Q Consensus 424 ~evv~~Ma~~~~erPIIFaLSNPt~~aE~~~t~eda~~wt~ 464 (481)
.|+++.|.+ ++...+++=.|||.. - .-+-+.++++
T Consensus 140 ~~i~~~i~~-~~P~A~~in~tNP~~--i---~t~a~~~~~~ 174 (477)
T 3u95_A 140 LEIAEKMKK-MAPKAYLMQTANPVF--E---ITQAVRRWTG 174 (477)
T ss_dssp HHHHHHHHH-HCTTCEEEECSSCHH--H---HHHHHHHHHC
T ss_pred HHHHHHHHh-hCCCeEEEEecChHH--H---HHHHHHHhCC
Confidence 689999964 999999999999987 3 3344556654
No 45
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=93.29 E-value=0.1 Score=52.34 Aligned_cols=50 Identities=18% Similarity=0.397 Sum_probs=38.9
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 304 LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
-.|++.+++..+.+++. .+++|+|||.+|.+||..|.. .|. ++|+++++.
T Consensus 138 ~~Gf~~~L~~~~~~l~g---k~~lVlGaGG~g~aia~~L~~-----~Ga------~~V~i~nR~ 187 (315)
T 3tnl_A 138 GTGYMRALKEAGHDIIG---KKMTICGAGGAATAICIQAAL-----DGV------KEISIFNRK 187 (315)
T ss_dssp HHHHHHHHHHTTCCCTT---SEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS
T ss_pred HHHHHHHHHHcCCCccC---CEEEEECCChHHHHHHHHHHH-----CCC------CEEEEEECC
Confidence 35688888888877777 999999999777777776654 454 589999884
No 46
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=93.20 E-value=0.099 Score=52.28 Aligned_cols=49 Identities=20% Similarity=0.460 Sum_probs=38.4
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 305 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.|++.+++..+.+++. .+++|+|||.||.+|+..|.. .|. ++|+++++.
T Consensus 133 ~Gf~~~L~~~~~~l~g---k~~lVlGAGGaaraia~~L~~-----~G~------~~v~v~nRt 181 (312)
T 3t4e_A 133 TGHIRAIKESGFDMRG---KTMVLLGAGGAATAIGAQAAI-----EGI------KEIKLFNRK 181 (312)
T ss_dssp HHHHHHHHHTTCCCTT---CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS
T ss_pred HHHHHHHHhcCCCcCC---CEEEEECcCHHHHHHHHHHHH-----cCC------CEEEEEECC
Confidence 4678888877877777 999999999888888777664 354 579998883
No 47
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=93.14 E-value=0.68 Score=47.60 Aligned_cols=88 Identities=18% Similarity=0.207 Sum_probs=65.8
Q ss_pred CCce-EEEeecCCCchHHHHHHHHh-hcCCccccCcc---hhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHH
Q 011618 263 WPKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDIQ---GTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLG 337 (481)
Q Consensus 263 ~P~~-~IqfEDf~~~naf~iL~ryr-~~~~~FNDDiQ---GTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~G 337 (481)
.|+. .|+--..+..|- .+ +..+ ..+.+.|.--- .+|=-+++.+++..|..+..|.+ .+|.|+|.|..|..
T Consensus 56 ~~~Lk~I~~~~~G~D~i-D~-~~~~~~gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~~~~l~g---~tvGIIGlG~IG~~ 130 (380)
T 2o4c_A 56 GSPVRFVGTCTIGTDHL-DL-DYFAEAGIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAE---RTYGVVGAGQVGGR 130 (380)
T ss_dssp TSCCCEEEECSSCSTTB-CH-HHHHHHTCEEECCTTTTHHHHHHHHHHHHHHHHHHHTCCGGG---CEEEEECCSHHHHH
T ss_pred CCCceEEEEcCcccchh-hH-HHHHhCCCEEEeCCCcChHHHHHHHHHHHHHHHhhhhcccCC---CEEEEEeCCHHHHH
Confidence 4887 888888888773 11 2222 34888885433 34445899999999999987777 99999999999999
Q ss_pred HHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 338 VLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 338 iA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
+|+.+... |+ +++.+|+.
T Consensus 131 vA~~l~~~-----G~-------~V~~~d~~ 148 (380)
T 2o4c_A 131 LVEVLRGL-----GW-------KVLVCDPP 148 (380)
T ss_dssp HHHHHHHT-----TC-------EEEEECHH
T ss_pred HHHHHHHC-----CC-------EEEEEcCC
Confidence 99988754 43 68888864
No 48
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=92.98 E-value=0.095 Score=51.45 Aligned_cols=97 Identities=25% Similarity=0.260 Sum_probs=60.1
Q ss_pred HHHHHHHHHHhCCce-EEEeecCCCchHHHHHHHHhhc------C-C-ccccC--cch--hHHHHHHHHHHHHHHhCCCC
Q 011618 252 VDEFMEAVHARWPKA-IVQFEDFQMKWAFETLERYRKR------F-C-MFNDD--IQG--TAGVALAGLLGTVRAQGLSL 318 (481)
Q Consensus 252 vdefv~av~~~~P~~-~IqfEDf~~~naf~iL~ryr~~------~-~-~FNDD--iQG--TaaV~LAgll~Alr~~g~~l 318 (481)
++++++.++. +++ +++.--=-...+++++++.-+. + + ++++| ..| |- -.|++.+++..+.++
T Consensus 50 l~~~~~~~~~--~~~~G~nVTiP~K~~v~~~ld~l~~~A~~iGAVNTv~~~~~g~l~G~NTD---~~G~~~~L~~~~~~l 124 (281)
T 3o8q_A 50 FTEAAKHFFA--QGGRGCNVTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTD---GEGLVQDLLAQQVLL 124 (281)
T ss_dssp HHHHHHHHHH--TTCCEEEECTTSHHHHHHHCSEECHHHHHHTCCSEEEECTTSCEEEECCH---HHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHh--CCCCEEEECCccHHHHHHHHhhcCHHHHhhCeeeEEEEcCCCcEEEEecH---HHHHHHHHHHhCCCc
Confidence 5666766663 333 5544332333455555544322 1 2 34444 334 33 357888888888777
Q ss_pred CCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 319 TDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 319 ~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
+. .+++|+|||.+|.+|+..|.+ .|. ++|+++++.
T Consensus 125 ~~---k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~ 159 (281)
T 3o8q_A 125 KG---ATILLIGAGGAARGVLKPLLD-----QQP------ASITVTNRT 159 (281)
T ss_dssp TT---CEEEEECCSHHHHHHHHHHHT-----TCC------SEEEEEESS
T ss_pred cC---CEEEEECchHHHHHHHHHHHh-----cCC------CeEEEEECC
Confidence 77 999999999888777766654 454 479988884
No 49
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=92.93 E-value=0.11 Score=50.79 Aligned_cols=48 Identities=27% Similarity=0.507 Sum_probs=38.9
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 305 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
.|++.+++..|.+++. .|++++|||.|+.+|+-.|.+. |. ++|+++++
T Consensus 110 ~Gf~~~L~~~g~~~~~---~~~lilGaGGaarai~~aL~~~-----g~------~~i~i~nR 157 (269)
T 3tum_A 110 AGFLGAAHKHGFEPAG---KRALVIGCGGVGSAIAYALAEA-----GI------ASITLCDP 157 (269)
T ss_dssp HHHHHHHHHTTCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC------SEEEEECS
T ss_pred HHHHHHHHHhCCCccc---CeEEEEecHHHHHHHHHHHHHh-----CC------CeEEEeCC
Confidence 3577888888888777 9999999999999998776653 43 58999887
No 50
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.83 E-value=0.17 Score=47.63 Aligned_cols=106 Identities=17% Similarity=0.269 Sum_probs=61.5
Q ss_pred CCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccee--ecCC-CCCC-hhhhccccccCCcCCcCC
Q 011618 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI--TKER-KNLD-PAAAPFAKDPGDFMGLRE 396 (481)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi--~~~r-~~l~-~~k~~fA~~~~~~~~~~~ 396 (481)
+...||.|+|+|..|.++|..|... | -+++++|++-=- .... ..+. .....++..... ..
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~-----G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 80 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADL-----G-------HEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPH----VH 80 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESCHHHHHTCC-------CCHHHHGGGSTT----CE
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCc----ee
Confidence 3449999999999999999988753 4 268888875211 0000 0000 001222221110 12
Q ss_pred CCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHh-hhcCCCCCEEEecCCCC
Q 011618 397 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAM-RESDSVKPAIFAMSNPT 447 (481)
Q Consensus 397 ~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M-a~~~~erPIIFaLSNPt 447 (481)
..++.|+++. +|++| ++. |.....++++.+ +... +..+|.-+|||.
T Consensus 81 ~~~~~e~~~~--aDvVi-lav-p~~~~~~~~~~i~~~~l-~g~ivi~~s~~~ 127 (245)
T 3dtt_A 81 LAAFADVAAG--AELVV-NAT-EGASSIAALTAAGAENL-AGKILVDIANPL 127 (245)
T ss_dssp EEEHHHHHHH--CSEEE-ECS-CGGGHHHHHHHHCHHHH-TTSEEEECCCCE
T ss_pred ccCHHHHHhc--CCEEE-Ecc-CcHHHHHHHHHhhhhhc-CCCEEEECCCCC
Confidence 3579999988 89887 443 333444666665 3322 567999999985
No 51
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=92.67 E-value=0.06 Score=53.51 Aligned_cols=37 Identities=24% Similarity=0.422 Sum_probs=31.9
Q ss_pred CCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
|++.||+|+|+|..|..+|+.|+.+++ .+|.++|.+=
T Consensus 34 L~~~~VlVvGaGGlGs~va~~La~aGV-----------G~i~lvD~D~ 70 (292)
T 3h8v_A 34 IRTFAVAIVGVGGVGSVTAEMLTRCGI-----------GKLLLFDYDK 70 (292)
T ss_dssp GGGCEEEEECCSHHHHHHHHHHHHHTC-----------SEEEEECCCB
T ss_pred HhCCeEEEECcCHHHHHHHHHHHHcCC-----------CEEEEECCCc
Confidence 444999999999999999999998755 6899999863
No 52
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=92.63 E-value=0.4 Score=46.49 Aligned_cols=99 Identities=15% Similarity=0.228 Sum_probs=66.5
Q ss_pred HHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCc
Q 011618 312 RAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDF 391 (481)
Q Consensus 312 r~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~ 391 (481)
+..+..+.. .+++|+|+|..|..+|+.+... |. +++.+|+.- .+ ....+ .+ ....
T Consensus 149 ~~~~~~l~g---~~v~IiG~G~iG~~~a~~l~~~-----G~-------~V~~~d~~~----~~--~~~~~-~~---g~~~ 203 (300)
T 2rir_A 149 QHTDYTIHG---SQVAVLGLGRTGMTIARTFAAL-----GA-------NVKVGARSS----AH--LARIT-EM---GLVP 203 (300)
T ss_dssp HTCSSCSTT---SEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSH----HH--HHHHH-HT---TCEE
T ss_pred HhcCCCCCC---CEEEEEcccHHHHHHHHHHHHC-----CC-------EEEEEECCH----HH--HHHHH-HC---CCeE
Confidence 345666666 9999999999999999987643 42 688888742 10 11000 01 0000
Q ss_pred CCcCCCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCC
Q 011618 392 MGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (481)
Q Consensus 392 ~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSN 445 (481)
....+|.|+++. .|++|-... .+.++++.++.|. +..+|+=+|.
T Consensus 204 ---~~~~~l~~~l~~--aDvVi~~~p-~~~i~~~~~~~mk----~g~~lin~a~ 247 (300)
T 2rir_A 204 ---FHTDELKEHVKD--IDICINTIP-SMILNQTVLSSMT----PKTLILDLAS 247 (300)
T ss_dssp ---EEGGGHHHHSTT--CSEEEECCS-SCCBCHHHHTTSC----TTCEEEECSS
T ss_pred ---EchhhHHHHhhC--CCEEEECCC-hhhhCHHHHHhCC----CCCEEEEEeC
Confidence 012468888876 899997765 5899999888883 5678888885
No 53
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=92.58 E-value=0.1 Score=50.46 Aligned_cols=103 Identities=23% Similarity=0.322 Sum_probs=62.7
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccc
Q 011618 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFA 385 (481)
Q Consensus 306 gll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA 385 (481)
|++.+++.. ++++ +++|+|||.+|.+++..|.. .|. ++|+++|+. .++ -+.++
T Consensus 97 G~~~~l~~~-----~~~~-~vliiGaGg~a~ai~~~L~~-----~G~------~~I~v~nR~----~~k------a~~la 149 (253)
T 3u62_A 97 GVVKSLEGV-----EVKE-PVVVVGAGGAARAVIYALLQ-----MGV------KDIWVVNRT----IER------AKALD 149 (253)
T ss_dssp HHHHHTTTC-----CCCS-SEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESC----HHH------HHTCC
T ss_pred HHHHHHHhc-----CCCC-eEEEECcHHHHHHHHHHHHH-----cCC------CEEEEEeCC----HHH------HHHHH
Confidence 577777543 4567 99999999999999887765 353 579999884 111 11222
Q ss_pred cccCCcCCcCCCCCHHHHhcccCCcEEEeecCCC-----CCCCHHHHHHhhhcCCCCCEEEecC-CCCC
Q 011618 386 KDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVG-----GVFNEEVLKAMRESDSVKPAIFAMS-NPTM 448 (481)
Q Consensus 386 ~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~-----g~Ft~evv~~Ma~~~~erPIIFaLS-NPt~ 448 (481)
+.-.. ....++.++++. +|++|-++..+ -.+..+.+ .+..+|+-++ |||+
T Consensus 150 ~~~~~----~~~~~~~~~~~~--aDiVInatp~gm~p~~~~i~~~~l-------~~~~~V~Divy~~T~ 205 (253)
T 3u62_A 150 FPVKI----FSLDQLDEVVKK--AKSLFNTTSVGMKGEELPVSDDSL-------KNLSLVYDVIYFDTP 205 (253)
T ss_dssp SSCEE----EEGGGHHHHHHT--CSEEEECSSTTTTSCCCSCCHHHH-------TTCSEEEECSSSCCH
T ss_pred HHccc----CCHHHHHhhhcC--CCEEEECCCCCCCCCCCCCCHHHh-------CcCCEEEEeeCCCcH
Confidence 21110 012457888877 89999765431 13444332 2567888765 3444
No 54
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=92.48 E-value=0.37 Score=48.33 Aligned_cols=101 Identities=21% Similarity=0.332 Sum_probs=59.9
Q ss_pred CCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCC
Q 011618 320 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGAS 399 (481)
Q Consensus 320 dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~ 399 (481)
+|++.+++|+|+|..|..+|+.+... |. +++++|++- . .+...+..+..... .. .....+
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~~-----Ga-------~V~~~d~~~----~--~~~~~~~~~g~~~~-~~-~~~~~~ 222 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALGM-----GA-------QVTILDVNH----K--RLQYLDDVFGGRVI-TL-TATEAN 222 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESCH----H--HHHHHHHHTTTSEE-EE-ECCHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEECCH----H--HHHHHHHhcCceEE-Ee-cCCHHH
Confidence 45669999999999999999887643 42 688888741 1 11111111111000 00 001235
Q ss_pred HHHHhcccCCcEEEeecCCCC-----CCCHHHHHHhhhcCCCCCEEEecCCC
Q 011618 400 LLEVVRKVKPHVLLGLSGVGG-----VFNEEVLKAMRESDSVKPAIFAMSNP 446 (481)
Q Consensus 400 L~e~V~~vkptvLIG~S~~~g-----~Ft~evv~~Ma~~~~erPIIFaLSNP 446 (481)
+.++++. .|++|.+.+.++ .++++.++.|. +.-+|.-+|.+
T Consensus 223 l~~~~~~--~DvVi~~~g~~~~~~~~li~~~~l~~mk----~gg~iV~v~~~ 268 (369)
T 2eez_A 223 IKKSVQH--ADLLIGAVLVPGAKAPKLVTRDMLSLMK----EGAVIVDVAVD 268 (369)
T ss_dssp HHHHHHH--CSEEEECCC-------CCSCHHHHTTSC----TTCEEEECC--
T ss_pred HHHHHhC--CCEEEECCCCCccccchhHHHHHHHhhc----CCCEEEEEecC
Confidence 8888886 899998876543 47999999994 34456656654
No 55
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=92.47 E-value=0.097 Score=51.17 Aligned_cols=99 Identities=22% Similarity=0.262 Sum_probs=60.5
Q ss_pred HHHHHHHHHHhCCce-EEEeecCCCchHHHHHHHHhhc------C-CccccC--cchhHHHHHHHHHHH-HHHhCCCCCC
Q 011618 252 VDEFMEAVHARWPKA-IVQFEDFQMKWAFETLERYRKR------F-CMFNDD--IQGTAGVALAGLLGT-VRAQGLSLTD 320 (481)
Q Consensus 252 vdefv~av~~~~P~~-~IqfEDf~~~naf~iL~ryr~~------~-~~FNDD--iQGTaaV~LAgll~A-lr~~g~~l~d 320 (481)
++++++.++. +++ +++.--=-...+++++++..+. + ++.++| ..|.-.= -.|++.+ ++..+.+++.
T Consensus 44 l~~~~~~~~~--~~~~G~nVTiP~K~~v~~~~d~l~~~A~~iGAvNTv~~~~g~l~G~NTD-~~G~~~~lL~~~~~~l~~ 120 (272)
T 3pwz_A 44 FEAQVLQFRS--EGGKGMNITAPFKLRAFELADRRSERAQLARAANALKFEDGRIVAENFD-GIGLLRDIEENLGEPLRN 120 (272)
T ss_dssp HHHHHHHHHH--TTCCEEEECTTCHHHHHHHCSEECHHHHHHTCCSEEEEETTEEEEECCH-HHHHHHHHHTTSCCCCTT
T ss_pred HHHHHHHHhh--CCCCEEEECchhHHHHHHHHhhCCHHHHHhCccceEEccCCeEEEecCC-HHHHHHHHHHHcCCCccC
Confidence 5677776664 343 6654443344566666554332 1 223333 3442222 3578888 8777777777
Q ss_pred CCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+++|+|||.+|.+++..|.+ .|. ++|+++++.
T Consensus 121 ---k~~lvlGaGg~~~aia~~L~~-----~G~------~~v~i~~R~ 153 (272)
T 3pwz_A 121 ---RRVLLLGAGGAVRGALLPFLQ-----AGP------SELVIANRD 153 (272)
T ss_dssp ---SEEEEECCSHHHHHHHHHHHH-----TCC------SEEEEECSC
T ss_pred ---CEEEEECccHHHHHHHHHHHH-----cCC------CEEEEEeCC
Confidence 999999999887777766654 354 478888873
No 56
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=92.46 E-value=1.4 Score=43.50 Aligned_cols=149 Identities=16% Similarity=0.162 Sum_probs=92.8
Q ss_pred hCCce-EEEeecCCCchHHHHHHHHh-hcCCccccCcch---hHHHHHHHHHHHHHHh---------C----CCCCCCCC
Q 011618 262 RWPKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDIQG---TAGVALAGLLGTVRAQ---------G----LSLTDFAD 323 (481)
Q Consensus 262 ~~P~~-~IqfEDf~~~naf~iL~ryr-~~~~~FNDDiQG---TaaV~LAgll~Alr~~---------g----~~l~dl~~ 323 (481)
..|+. .|+.--.+..|- . ++..+ ..+.+.|----. +|=-+++.+++..|-. | ..-.+|.+
T Consensus 65 ~~~~Lk~I~~~~~G~d~i-d-~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g 142 (313)
T 2ekl_A 65 KGKKLKIIARAGIGLDNI-D-TEEAEKRNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIEGLELAG 142 (313)
T ss_dssp HCTTCCEEEECSSCCTTB-C-HHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCCCTT
T ss_pred hCCCCeEEEEcCCCCCcc-C-HHHHHhCCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCC
Confidence 46887 888777776663 2 23333 348787754333 4445788898888752 1 11234555
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
.+|.|+|.|..|..+|+.+... |+ +++.+|+.. ...+ +.... ....++.|+
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~-----G~-------~V~~~d~~~---------~~~~---~~~~g-----~~~~~l~el 193 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAM-----GM-------KVLAYDILD---------IREK---AEKIN-----AKAVSLEEL 193 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-----TC-------EEEEECSSC---------CHHH---HHHTT-----CEECCHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEECCCc---------chhH---HHhcC-----ceecCHHHH
Confidence 9999999999999999988753 43 688888641 1110 11110 011368888
Q ss_pred hcccCCcEEEeecC----CCCCCCHHHHHHhhhcCCCCCEEEecCCCC
Q 011618 404 VRKVKPHVLLGLSG----VGGVFNEEVLKAMRESDSVKPAIFAMSNPT 447 (481)
Q Consensus 404 V~~vkptvLIG~S~----~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt 447 (481)
++. .|+++=.-- ..++++++.+..|. +..++.-.|.-.
T Consensus 194 l~~--aDvVvl~~P~~~~t~~li~~~~l~~mk----~ga~lIn~arg~ 235 (313)
T 2ekl_A 194 LKN--SDVISLHVTVSKDAKPIIDYPQFELMK----DNVIIVNTSRAV 235 (313)
T ss_dssp HHH--CSEEEECCCCCTTSCCSBCHHHHHHSC----TTEEEEESSCGG
T ss_pred Hhh--CCEEEEeccCChHHHHhhCHHHHhcCC----CCCEEEECCCCc
Confidence 876 788774421 23677888888883 466777777633
No 57
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=92.40 E-value=0.66 Score=44.54 Aligned_cols=86 Identities=21% Similarity=0.250 Sum_probs=58.7
Q ss_pred eEEEeecCCCchHHHHHHHHhhc-C----CccccCcchhHHHHHHHHHHHHHHh-CCCCCCCCCceEEEeC-ccHHHHHH
Q 011618 266 AIVQFEDFQMKWAFETLERYRKR-F----CMFNDDIQGTAGVALAGLLGTVRAQ-GLSLTDFADQKIVVVG-AGSAGLGV 338 (481)
Q Consensus 266 ~~IqfEDf~~~naf~iL~ryr~~-~----~~FNDDiQGTaaV~LAgll~Alr~~-g~~l~dl~~~riv~~G-AGsAg~Gi 338 (481)
..+.++-+.-..+.+++++-+.. + .+...|..|.- ..-.|++.+++.. +.+++. .+++|.| +|.+|.++
T Consensus 60 t~~~~~G~~~~~~~~~~~~~~~~~~gavnt~~~~~~~G~n-Td~~g~~~~l~~~~~~~l~g---k~vlVtGaaGGiG~ai 135 (287)
T 1lu9_A 60 TAIFVGGGDMAAGERVFEAVKKRFFGPFRVSCMLDSNGSN-TTAAAGVALVVKAAGGSVKG---KKAVVLAGTGPVGMRS 135 (287)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHHCBTTBCCEEEECSTTHH-HHHHHHHHHHHHHTTSCCTT---CEEEEETCSSHHHHHH
T ss_pred ceEEEccchHHHHHHHHHHHHHhcCCCeEEEEecCCCcCC-chHHHHHHHHHHhhccCCCC---CEEEEECCCcHHHHHH
Confidence 35556655566888999988753 2 22234555532 2346677777766 666666 9999999 89999999
Q ss_pred HHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 339 LKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 339 A~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
|..+.+. |. +++++|++
T Consensus 136 a~~L~~~-----G~-------~V~i~~R~ 152 (287)
T 1lu9_A 136 AALLAGE-----GA-------EVVLCGRK 152 (287)
T ss_dssp HHHHHHT-----TC-------EEEEEESS
T ss_pred HHHHHHC-----cC-------EEEEEECC
Confidence 8887653 42 48888874
No 58
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.30 E-value=0.072 Score=45.79 Aligned_cols=92 Identities=12% Similarity=0.124 Sum_probs=57.2
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
.+|+|+|+|..|..++..+.. .|. + ++++|++ . +..+.|++.... . .....++.++
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~-----~g~------~-v~v~~r~----~------~~~~~~a~~~~~-~-~~~~~~~~~~ 77 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSY-----PQY------K-VTVAGRN----I------DHVRAFAEKYEY-E-YVLINDIDSL 77 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCT-----TTC------E-EEEEESC----H------HHHHHHHHHHTC-E-EEECSCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC------E-EEEEcCC----H------HHHHHHHHHhCC-c-eEeecCHHHH
Confidence 799999999999988876653 232 3 8888873 1 111223322110 0 0123578999
Q ss_pred hcccCCcEEEeecCCC-CCCCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 404 VRKVKPHVLLGLSGVG-GVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 404 V~~vkptvLIG~S~~~-g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
++. +|++|-+++.+ ..++.++ ..+.-+|+-+++|..
T Consensus 78 ~~~--~Divi~at~~~~~~~~~~~-------l~~g~~vid~~~p~~ 114 (144)
T 3oj0_A 78 IKN--NDVIITATSSKTPIVEERS-------LMPGKLFIDLGNPPN 114 (144)
T ss_dssp HHT--CSEEEECSCCSSCSBCGGG-------CCTTCEEEECCSSCS
T ss_pred hcC--CCEEEEeCCCCCcEeeHHH-------cCCCCEEEEccCCcc
Confidence 987 89999776644 2344432 235678999999853
No 59
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=92.26 E-value=1.3 Score=47.49 Aligned_cols=184 Identities=17% Similarity=0.222 Sum_probs=114.8
Q ss_pred CCChhhhhHhHHHHHHHHHH-hC--CceEEEeecCCCchH--HHHHHHHhhcCC---------ccccCc---------ch
Q 011618 242 RLEGEEYLSIVDEFMEAVHA-RW--PKAIVQFEDFQMKWA--FETLERYRKRFC---------MFNDDI---------QG 298 (481)
Q Consensus 242 R~~g~~Y~~~vdefv~av~~-~~--P~~~IqfEDf~~~na--f~iL~ryr~~~~---------~FNDDi---------QG 298 (481)
..+..|-..+...||+.+.+ .+ |..-|-=+|++..-. --+.+.|+...- +--.-+ .-
T Consensus 135 ~~s~~El~r~~r~f~~eL~~~~~IGp~~dipApDvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eA 214 (501)
T 3mw9_A 135 NYTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISA 214 (501)
T ss_dssp GSCHHHHHHHHHHHHHHHHHTTSCBTTTEECCBCTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTH
T ss_pred cCCHHHHHHHHHHHHHHHhhccCCCCCeeEecCCCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCc
Confidence 34667888899999999985 24 888888899987532 237788864321 111111 22
Q ss_pred hHHHHHHHHHH------HHHHhCCC--CCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccee
Q 011618 299 TAGVALAGLLG------TVRAQGLS--LTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (481)
Q Consensus 299 TaaV~LAgll~------Alr~~g~~--l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 370 (481)
||-=+.-++-. +++..|.+ |+. .||+|-|.|..|...|+.|.+. |. +-+-+.|++|-|
T Consensus 215 Tg~GV~~~~~~~l~~~~~~~~~G~~~~l~g---~tVaVQG~GNVG~~aa~~L~e~-----Ga------kVVavsDs~G~i 280 (501)
T 3mw9_A 215 TGRGVFHGIENFINEASYMSILGMTPGFGD---KTFVVQGFGNVGLHSMRYLHRF-----GA------KCITVGESDGSI 280 (501)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHTTCCSSSTT---CEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEECSSCEE
T ss_pred hHHHHHHHHHHHHhhhHHHHHcCCCCCcCC---CEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEcCCceE
Confidence 44333333332 34456653 555 9999999999999999998764 42 456689999999
Q ss_pred ecCCCCCChhhh-ccccccCCcCCcCCCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCC
Q 011618 371 TKERKNLDPAAA-PFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNP 446 (481)
Q Consensus 371 ~~~r~~l~~~k~-~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNP 446 (481)
.... .++..+. .+........+-+....+.+.+-.++.||||=+.. .+.+|++-++.+ ...||.--+|-
T Consensus 281 yd~~-Gid~~~l~~~k~~~g~i~~~~~a~~~~~~il~~~~DIliPcA~-~n~I~~~na~~l-----~akiV~EgAN~ 350 (501)
T 3mw9_A 281 WNPD-GIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDILIPAAS-EKQLTKSNAPRV-----KAKIIAEGANG 350 (501)
T ss_dssp ECTT-CCCHHHHHHHHHHHSSSTTCTTSEEECSCGGGSCCSEEEECSS-SCCBCTTTGGGC-----CCSEEECCSSS
T ss_pred ECCC-CCCHHHHHHHHHhcCCeecccCceeeccccccccceEEeeccc-cCccCHhHHHHc-----CceEEEeCCCC
Confidence 9654 3543221 11111111000000000111245578999998887 499999998887 36788888886
No 60
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=92.09 E-value=8.7 Score=40.48 Aligned_cols=184 Identities=13% Similarity=0.108 Sum_probs=115.8
Q ss_pred ChhhhhHhHHHHHHHHHHhC-CceEEEeecCCCchH--HHHHHHHhh---c--CCcccc----------CcchhHHHHHH
Q 011618 244 EGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWA--FETLERYRK---R--FCMFND----------DIQGTAGVALA 305 (481)
Q Consensus 244 ~g~~Y~~~vdefv~av~~~~-P~~~IqfEDf~~~na--f~iL~ryr~---~--~~~FND----------DiQGTaaV~LA 305 (481)
+..|-..|-..||..+.+.. |..-|-=+|++..-. --+.+.|++ . .-|+-. .-.-||-=+.-
T Consensus 136 s~~e~~r~~r~f~~~L~~~ig~~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~ 215 (449)
T 1bgv_A 136 SDREVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVY 215 (449)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhheeCCCCcCCCCCCCCCHHHHHHHHHHHHHhcCCCcCceEecCCcccCCCCCcccchhHHHHH
Confidence 34567777778888886655 888889999987622 124455553 2 122211 22335555555
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCC-Chhh---
Q 011618 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNL-DPAA--- 381 (481)
Q Consensus 306 gll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l-~~~k--- 381 (481)
++-.+++..|.+++. .||+|-|.|..|...|++|.+. |. +=+-+.|++|-|.+.. .+ ++.+
T Consensus 216 ~~~~~~~~~G~~l~g---~~v~VqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~G~i~dp~-Gi~d~edi~~ 280 (449)
T 1bgv_A 216 YVEAVMKHENDTLVG---KTVALAGFGNVAWGAAKKLAEL-----GA------KAVTLSGPDGYIYDPE-GITTEEKINY 280 (449)
T ss_dssp HHHHHHHHTTCCSTT---CEEEECCSSHHHHHHHHHHHHH-----TC------EEEEEEETTEEEECTT-CSCSHHHHHH
T ss_pred HHHHHHHHccCCcCC---CEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEeCCceEECCC-cCCCHHHHHH
Confidence 677788888877777 9999999999999999888764 32 3445799999988754 35 3211
Q ss_pred -hcccccc-CCcCCc-----CCCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCC
Q 011618 382 -APFAKDP-GDFMGL-----REGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNP 446 (481)
Q Consensus 382 -~~fA~~~-~~~~~~-----~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNP 446 (481)
..+.+.. ..+.+- ....+-.+ +-.++.|+|+=+.. ++.+|++-++.+.+ |...||.--+|=
T Consensus 281 l~~~k~~~~g~v~~y~~~~~a~~i~~~e-~~~~~~Dil~P~A~-~~~I~~~na~~l~a--~g~kiV~EgAN~ 348 (449)
T 1bgv_A 281 MLEMRASGRNKVQDYADKFGVQFFPGEK-PWGQKVDIIMPCAT-QNDVDLEQAKKIVA--NNVKYYIEVANM 348 (449)
T ss_dssp HHHHHHHCCCCTHHHHHHHTCEEEETCC-GGGSCCSEEECCSC-TTCBCHHHHHHHHH--TTCCEEECCSSS
T ss_pred HHHHHhccCCChhhcccccCCEEeCchh-hhcCCcceeecccc-ccccchhhHHHHHh--cCCeEEEeCCCC
Confidence 0111000 000000 00000011 22578999998875 79999999999953 456788888874
No 61
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=92.09 E-value=0.065 Score=54.54 Aligned_cols=36 Identities=22% Similarity=0.420 Sum_probs=31.5
Q ss_pred CCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
|++.||+|+|||..|..+|+.|+.+++ ++|.++|.+
T Consensus 32 L~~~~VlIvGaGGlGs~va~~La~aGV-----------g~ItlvD~D 67 (340)
T 3rui_A 32 IKNTKVLLLGAGTLGCYVSRALIAWGV-----------RKITFVDNG 67 (340)
T ss_dssp HHTCEEEEECCSHHHHHHHHHHHHTTC-----------CEEEEECCC
T ss_pred HhCCEEEEECCCHHHHHHHHHHHHcCC-----------CEEEEecCC
Confidence 445999999999999999999987654 689999986
No 62
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=92.00 E-value=0.34 Score=48.95 Aligned_cols=96 Identities=17% Similarity=0.227 Sum_probs=63.6
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
.||.|+|.|..|..+|..|... | -+++++|+.- +....++...- ....++.|+
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~-----G-------~~V~v~dr~~----------~~~~~l~~~g~-----~~~~s~~e~ 75 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKG-----G-------HECVVYDLNV----------NAVQALEREGI-----AGARSIEEF 75 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCH----------HHHHHHHTTTC-----BCCSSHHHH
T ss_pred CEEEEECchHHHHHHHHHHHhC-----C-------CEEEEEeCCH----------HHHHHHHHCCC-----EEeCCHHHH
Confidence 7999999999999999988754 4 2577777631 11112222111 124579999
Q ss_pred hccc-CCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 404 VRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 404 V~~v-kptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
++.. +||++|= +..++ -.+++++.+.....+..||.-+||-.+
T Consensus 76 ~~~a~~~DvVi~-~vp~~-~v~~vl~~l~~~l~~g~iiId~st~~~ 119 (358)
T 4e21_A 76 CAKLVKPRVVWL-MVPAA-VVDSMLQRMTPLLAANDIVIDGGNSHY 119 (358)
T ss_dssp HHHSCSSCEEEE-CSCGG-GHHHHHHHHGGGCCTTCEEEECSSCCH
T ss_pred HhcCCCCCEEEE-eCCHH-HHHHHHHHHHhhCCCCCEEEeCCCCCh
Confidence 8874 5688873 33234 788888888654556778888887554
No 63
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=91.90 E-value=0.068 Score=52.47 Aligned_cols=101 Identities=14% Similarity=0.189 Sum_probs=62.7
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhc------cccccCCcCCcCCC
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAP------FAKDPGDFMGLREG 397 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~------fA~~~~~~~~~~~~ 397 (481)
.||.|+|||+.|.++|..+... |+. .++++|.+- ++ +...... +....... ...
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-----g~~------~V~l~D~~~----~~--~~~~~~~l~~~~~~~~~~~~i---~~t 64 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-----NLA------DVVLFDIAE----GI--PQGKALDITHSMVMFGSTSKV---IGT 64 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC------EEEEECSSS----SH--HHHHHHHHHHHHHHHTCCCCE---EEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCc------eEEEEeCCc----hH--HHHHHHHHHhhhhhcCCCcEE---EEC
Confidence 6899999999999999988754 431 499999852 11 1111001 11001000 112
Q ss_pred CCHHHHhcccCCcEEEeecCCCCC--------------CCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 398 ASLLEVVRKVKPHVLLGLSGVGGV--------------FNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 398 ~~L~e~V~~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
.++ ++++. +|++|=+.+.|.. +.+++++.+.+ ++..-||+-.|||..
T Consensus 65 ~d~-~a~~~--aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~-~~~~~iii~~sNp~~ 125 (317)
T 2ewd_A 65 DDY-ADISG--SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKK-YCPNAFVICITNPLD 125 (317)
T ss_dssp SCG-GGGTT--CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHH-HCTTSEEEECCSSHH
T ss_pred CCH-HHhCC--CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHH-HCCCcEEEEeCChHH
Confidence 456 77877 8988855544331 24567777754 677888988999976
No 64
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=91.79 E-value=0.8 Score=47.87 Aligned_cols=178 Identities=12% Similarity=0.070 Sum_probs=113.6
Q ss_pred ChhhhhHhHHHHHHHHHHhC-CceEEEeecCCCchHHH---HHHHHhhc-----CCccccC----------cchhHHHHH
Q 011618 244 EGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWAFE---TLERYRKR-----FCMFNDD----------IQGTAGVAL 304 (481)
Q Consensus 244 ~g~~Y~~~vdefv~av~~~~-P~~~IqfEDf~~~naf~---iL~ryr~~-----~~~FNDD----------iQGTaaV~L 304 (481)
+.+|-..+...|+.++...- |..-|-=+|++.. +.. +.+.|+.. ..++.-+ -.-||-=+.
T Consensus 116 s~~e~~r~~r~f~~~l~~~iG~~~dvpA~D~Gt~-~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~ 194 (421)
T 1v9l_A 116 SQRELEELSRGYARAIAPLIGDVVDIPAPDVGTN-AQIMAWMVDEYSKIKGYNVPGVFTSKPPELWGNPVREYATGFGVA 194 (421)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCTTCC-HHHHHHHHHHHHHHHTSCCGGGSCSCCSSSSCCGGGGGHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCCC-HHHHHHHHHHHHHHhCCCCCCeEeccchhhCCCCCcccchHHHHH
Confidence 45667788899999998877 8888889999873 222 34666431 1222222 123555555
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEE-EEeccceeecCCCCCChhh-h
Q 011618 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFF-LLDKDGLITKERKNLDPAA-A 382 (481)
Q Consensus 305 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~-lvD~~GLi~~~r~~l~~~k-~ 382 (481)
-++-.+++..|.+++. .+|+|.|.|..|...|++|.+. |. +++ +.|++|-|.+... |+... +
T Consensus 195 ~~~~~~~~~~g~~l~g---k~vaVqG~GnVG~~aa~~L~e~-----Ga-------kVVavsD~~G~i~dp~G-lD~~~l~ 258 (421)
T 1v9l_A 195 VATREMAKKLWGGIEG---KTVAIQGMGNVGRWTAYWLEKM-----GA-------KVIAVSDINGVAYRKEG-LNVELIQ 258 (421)
T ss_dssp HHHHHHHHHHHSCCTT---CEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEEECSSCEEECTTC-CCTHHHH
T ss_pred HHHHHHHHhcCCCcCC---CEEEEECcCHHHHHHHHHHHHC-----CC-------EEEEEECCCcEEECCCC-CCHHHHH
Confidence 5667778888887777 9999999999999999887653 42 455 9999999987542 32211 1
Q ss_pred ccccccCC--cCCc--C---CCC-CHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCC
Q 011618 383 PFAKDPGD--FMGL--R---EGA-SLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (481)
Q Consensus 383 ~fA~~~~~--~~~~--~---~~~-~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSN 445 (481)
.+...... |.+- . ..- +-.| +-.++.|+|+=+.. ++.+|++-++.+ ...||.--+|
T Consensus 259 ~~k~~~g~~~v~~y~~~~~~~~~~~~~~-~~~~~~Dil~P~A~-~~~I~~~~a~~l-----~ak~V~EgAN 322 (421)
T 1v9l_A 259 KNKGLTGPALVELFTTKDNAEFVKNPDA-IFKLDVDIFVPAAI-ENVIRGDNAGLV-----KARLVVEGAN 322 (421)
T ss_dssp HTTTSCHHHHHHHHHHTSCCCCCSSTTG-GGGCCCSEEEECSC-SSCBCTTTTTTC-----CCSEEECCSS
T ss_pred HHHHhhCCccccccccccCceEeCCchh-hhcCCccEEEecCc-CCccchhhHHHc-----CceEEEecCC
Confidence 12111100 0000 0 000 1122 34578999997774 789998888776 3578887777
No 65
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=91.77 E-value=0.42 Score=47.26 Aligned_cols=102 Identities=21% Similarity=0.236 Sum_probs=64.5
Q ss_pred eEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCC---CCCH
Q 011618 325 KIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE---GASL 400 (481)
Q Consensus 325 riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~---~~~L 400 (481)
||+|+|| |..|..++..|+. .|+ -..++++|.+- ... ....+.+...+.. ... ..++
T Consensus 2 KI~IiGa~G~VG~~la~~L~~-----~~~-----~~ev~L~Di~~--~~~------~a~dL~~~~~~~~-l~~~~~t~d~ 62 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKN-----SPL-----VSRLTLYDIAH--TPG------VAADLSHIETRAT-VKGYLGPEQL 62 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHT-----CTT-----CSEEEEEESSS--HHH------HHHHHTTSSSSCE-EEEEESGGGH
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CcEEEEEeCCc--cHH------HHHHHhccCcCce-EEEecCCCCH
Confidence 8999998 9999998877652 354 25799999864 100 1111111110000 011 1368
Q ss_pred HHHhcccCCcEEEeecCCC---C-----------CCCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 401 LEVVRKVKPHVLLGLSGVG---G-----------VFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~---g-----------~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
.+++++ +|++|=+.+.| | ...+++++.|.+ ++...+|+-.|||..
T Consensus 63 ~~a~~~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~viv~sNPv~ 121 (314)
T 1mld_A 63 PDCLKG--CDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQ-HCPDAMICIISNPVN 121 (314)
T ss_dssp HHHHTT--CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHH-HCTTSEEEECSSCHH
T ss_pred HHHhCC--CCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHh-hCCCeEEEEECCCcc
Confidence 999998 89988554443 3 245667777754 778888888999987
No 66
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=91.63 E-value=0.84 Score=42.48 Aligned_cols=91 Identities=12% Similarity=0.108 Sum_probs=54.3
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
.||.|+|+|..|..+|..|... |.. ...+++++|++- ++ + .. ....++.|+
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~-----g~~---~~~~v~~~~~~~----~~---------~--g~------~~~~~~~~~ 55 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANA-----NII---KKENLFYYGPSK----KN---------T--TL------NYMSSNEEL 55 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH-----TSS---CGGGEEEECSSC----CS---------S--SS------EECSCHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----CCC---CCCeEEEEeCCc----cc---------C--ce------EEeCCHHHH
Confidence 6899999999999999988754 320 002588888741 11 0 00 012356677
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 404 V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
++. +|++| ++. +....+++++.+.. +.+..+|+.++|..+
T Consensus 56 ~~~--~D~vi-~~v-~~~~~~~v~~~l~~-~l~~~~vv~~~~gi~ 95 (262)
T 2rcy_A 56 ARH--CDIIV-CAV-KPDIAGSVLNNIKP-YLSSKLLISICGGLN 95 (262)
T ss_dssp HHH--CSEEE-ECS-CTTTHHHHHHHSGG-GCTTCEEEECCSSCC
T ss_pred Hhc--CCEEE-EEe-CHHHHHHHHHHHHH-hcCCCEEEEECCCCC
Confidence 765 67666 332 23456677777653 224556666776655
No 67
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=91.56 E-value=0.19 Score=49.34 Aligned_cols=90 Identities=13% Similarity=0.260 Sum_probs=54.9
Q ss_pred HHHHHHHHHhC-CCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhc
Q 011618 305 AGLLGTVRAQG-LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAP 383 (481)
Q Consensus 305 Agll~Alr~~g-~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~ 383 (481)
.|++.+++..+ .++.. .+++|+|||.+|.++|..|.. .|. ++|+++|+.- ++ .....+.
T Consensus 125 ~G~~~~l~~~~~~~l~~---~~vlVlGaGg~g~aia~~L~~-----~G~------~~V~v~nR~~----~k--a~~la~~ 184 (297)
T 2egg_A 125 LGYVQALEEEMNITLDG---KRILVIGAGGGARGIYFSLLS-----TAA------ERIDMANRTV----EK--AERLVRE 184 (297)
T ss_dssp HHHHHHHHHHTTCCCTT---CEEEEECCSHHHHHHHHHHHT-----TTC------SEEEEECSSH----HH--HHHHHHH
T ss_pred HHHHHHHHHhCCCCCCC---CEEEEECcHHHHHHHHHHHHH-----CCC------CEEEEEeCCH----HH--HHHHHHH
Confidence 67888888776 66666 999999999988888877664 353 4788888741 11 1111111
Q ss_pred cccccCCcCCcCCCCCHHHHhcccCCcEEEeecCCC
Q 011618 384 FAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVG 419 (481)
Q Consensus 384 fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~ 419 (481)
+....... ....++.++++. +|++|-+.+.+
T Consensus 185 ~~~~~~~~---~~~~~~~~~~~~--aDivIn~t~~~ 215 (297)
T 2egg_A 185 GDERRSAY---FSLAEAETRLAE--YDIIINTTSVG 215 (297)
T ss_dssp SCSSSCCE---ECHHHHHHTGGG--CSEEEECSCTT
T ss_pred hhhccCce---eeHHHHHhhhcc--CCEEEECCCCC
Confidence 11100000 011246677776 89999887643
No 68
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=91.52 E-value=1.2 Score=44.10 Aligned_cols=146 Identities=17% Similarity=0.224 Sum_probs=87.8
Q ss_pred Cce-EEEeecCCCchHHHHHHHHh-hcCCccccCc---chhHHHHHHHHHHHHHHh---------CC-----C----CCC
Q 011618 264 PKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL-----S----LTD 320 (481)
Q Consensus 264 P~~-~IqfEDf~~~naf~iL~ryr-~~~~~FNDDi---QGTaaV~LAgll~Alr~~---------g~-----~----l~d 320 (481)
|+. .|+.--.+..|- . ++..+ ..+++.|--- +.+|=-+++.+++..|-. |. + -.+
T Consensus 75 ~~Lk~I~~~~~G~d~i-d-~~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~ 152 (330)
T 2gcg_A 75 ANLKVISTMSVGIDHL-A-LDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYG 152 (330)
T ss_dssp TTCCEEEESSSCCTTB-C-HHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCC
T ss_pred CCceEEEECCcccccc-c-HHHHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcC
Confidence 776 888888887763 2 33333 3488888643 334445788899887732 11 1 135
Q ss_pred CCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCH
Q 011618 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (481)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L 400 (481)
|.+.+|.|+|+|..|..+|+.+.. .|+ +++.+|++.- .....+ .+ .- ...++
T Consensus 153 l~g~~vgIIG~G~iG~~iA~~l~~-----~G~-------~V~~~d~~~~------~~~~~~-~~---g~------~~~~l 204 (330)
T 2gcg_A 153 LTQSTVGIIGLGRIGQAIARRLKP-----FGV-------QRFLYTGRQP------RPEEAA-EF---QA------EFVST 204 (330)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHGG-----GTC-------CEEEEESSSC------CHHHHH-TT---TC------EECCH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEECCCCc------chhHHH-hc---Cc------eeCCH
Confidence 666999999999999999998764 353 5888886421 011000 00 00 01267
Q ss_pred HHHhcccCCcEEEeecC----CCCCCCHHHHHHhhhcCCCCCEEEecCC
Q 011618 401 LEVVRKVKPHVLLGLSG----VGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (481)
Q Consensus 401 ~e~V~~vkptvLIG~S~----~~g~Ft~evv~~Ma~~~~erPIIFaLSN 445 (481)
.|+++. .|++|=.-. ..+.+++++++.|. +..++.-.|.
T Consensus 205 ~e~l~~--aDvVi~~vp~~~~t~~~i~~~~~~~mk----~gailIn~sr 247 (330)
T 2gcg_A 205 PELAAQ--SDFIVVACSLTPATEGLCNKDFFQKMK----ETAVFINISR 247 (330)
T ss_dssp HHHHHH--CSEEEECCCCCTTTTTCBSHHHHHHSC----TTCEEEECSC
T ss_pred HHHHhh--CCEEEEeCCCChHHHHhhCHHHHhcCC----CCcEEEECCC
Confidence 777776 777764321 13567777777772 3556655554
No 69
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=91.44 E-value=0.81 Score=47.14 Aligned_cols=119 Identities=18% Similarity=0.210 Sum_probs=78.8
Q ss_pred CCccccCc---chhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEe
Q 011618 289 FCMFNDDI---QGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLD 365 (481)
Q Consensus 289 ~~~FNDDi---QGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD 365 (481)
|.+.|--- +.+|=-+++.+++..|..|..|.. .+|.|+|.|..|..+|+.+... |+ +++.+|
T Consensus 85 I~v~n~pg~~~~~VAE~~l~~lL~l~r~~g~~l~g---ktvGIIGlG~IG~~vA~~l~a~-----G~-------~V~~~d 149 (381)
T 3oet_A 85 IGFSAAPGCNAIAVVEYVFSALLMLAERDGFSLRD---RTIGIVGVGNVGSRLQTRLEAL-----GI-------RTLLCD 149 (381)
T ss_dssp CEEECCTTTTHHHHHHHHHHHHHHHHHHTTCCGGG---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEC
T ss_pred EEEEECCCcCcchhHHHHHHHHHHHHHhcCCccCC---CEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEEC
Confidence 55555432 345556899999999999988777 9999999999999999998754 43 688888
Q ss_pred ccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHHhcccCCcEEEeecC--------CCCCCCHHHHHHhhhcCCCC
Q 011618 366 KDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG--------VGGVFNEEVLKAMRESDSVK 437 (481)
Q Consensus 366 ~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~--------~~g~Ft~evv~~Ma~~~~er 437 (481)
+..- ... .. ....+|.|+++. .|+++=.-- .-++|+++.+..|. +.
T Consensus 150 ~~~~---~~~-----------~~------~~~~sl~ell~~--aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk----~g 203 (381)
T 3oet_A 150 PPRA---ARG-----------DE------GDFRTLDELVQE--ADVLTFHTPLYKDGPYKTLHLADETLIRRLK----PG 203 (381)
T ss_dssp HHHH---HTT-----------CC------SCBCCHHHHHHH--CSEEEECCCCCCSSTTCCTTSBCHHHHHHSC----TT
T ss_pred CChH---Hhc-----------cC------cccCCHHHHHhh--CCEEEEcCcCCccccccchhhcCHHHHhcCC----CC
Confidence 6310 000 00 013467777776 777763321 23577777777773 46
Q ss_pred CEEEecCCCCC
Q 011618 438 PAIFAMSNPTM 448 (481)
Q Consensus 438 PIIFaLSNPt~ 448 (481)
.|+.=.|.-..
T Consensus 204 ailIN~aRG~v 214 (381)
T 3oet_A 204 AILINACRGPV 214 (381)
T ss_dssp EEEEECSCGGG
T ss_pred cEEEECCCCcc
Confidence 67766665444
No 70
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=91.44 E-value=0.28 Score=51.44 Aligned_cols=102 Identities=16% Similarity=0.175 Sum_probs=65.5
Q ss_pred CceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHH
Q 011618 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (481)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (481)
+.+|.|+|+|..|.++|..|.+. |. +++++|+.- +... .++..... .+.....++.|
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~~r~~------~~~~----~l~~~~~~-~gi~~~~s~~e 71 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESR-----GY-------TVSIFNRSR------EKTE----EVIAENPG-KKLVPYYTVKE 71 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTT-----TC-------CEEEECSSH------HHHH----HHHHHSTT-SCEEECSSHHH
T ss_pred CCeEEEEccHHHHHHHHHHHHhC-----CC-------eEEEEeCCH------HHHH----HHHhhCCC-CCeEEeCCHHH
Confidence 38999999999999999988653 53 577777631 1111 12111000 01112457999
Q ss_pred Hhccc-CCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 403 VVRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 403 ~V~~v-kptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
+++.. +||++| ++..++..++++++.+.....+..||.-+||-.+
T Consensus 72 ~v~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~~ 117 (480)
T 2zyd_A 72 FVESLETPRRIL-LMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFF 117 (480)
T ss_dssp HHHTBCSSCEEE-ECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCCH
T ss_pred HHhCCCCCCEEE-EECCCHHHHHHHHHHHHhhcCCCCEEEECCCCCH
Confidence 88753 478877 4444567788999888653445678888999775
No 71
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=91.40 E-value=1.3 Score=43.61 Aligned_cols=150 Identities=20% Similarity=0.220 Sum_probs=94.0
Q ss_pred HhCCce-EEEeecCCCchHHHHHHHHh-hcCCccccCcch---hHHHHHHHHHHHHHHh---------C------CCCCC
Q 011618 261 ARWPKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDIQG---TAGVALAGLLGTVRAQ---------G------LSLTD 320 (481)
Q Consensus 261 ~~~P~~-~IqfEDf~~~naf~iL~ryr-~~~~~FNDDiQG---TaaV~LAgll~Alr~~---------g------~~l~d 320 (481)
...|+. .|+.--.+..|- . ++..+ ..+.+.|----. +|=-+++.+++..|-. | ..-.+
T Consensus 62 ~~~~~Lk~I~~~~~G~d~i-d-~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~ 139 (307)
T 1wwk_A 62 ESAPKLKVIARAGVGLDNI-D-VEAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIE 139 (307)
T ss_dssp TTCTTCCEEEESSSCCTTB-C-HHHHHHHTCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCC
T ss_pred hhCCCCeEEEECCcccccc-C-HHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcc
Confidence 346887 888877777763 2 23333 347777754333 4444788888887731 1 11135
Q ss_pred CCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCH
Q 011618 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (481)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L 400 (481)
|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+.. .. ..+.... . ...+|
T Consensus 140 l~g~~vgIiG~G~IG~~~A~~l~~~-----G~-------~V~~~d~~~---------~~---~~~~~~g-~----~~~~l 190 (307)
T 1wwk_A 140 LEGKTIGIIGFGRIGYQVAKIANAL-----GM-------NILLYDPYP---------NE---ERAKEVN-G----KFVDL 190 (307)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSC---------CH---HHHHHTT-C----EECCH
T ss_pred cCCceEEEEccCHHHHHHHHHHHHC-----CC-------EEEEECCCC---------Ch---hhHhhcC-c----cccCH
Confidence 6669999999999999999988653 43 688888741 11 0111110 0 12368
Q ss_pred HHHhcccCCcEEEeecC----CCCCCCHHHHHHhhhcCCCCCEEEecCCCC
Q 011618 401 LEVVRKVKPHVLLGLSG----VGGVFNEEVLKAMRESDSVKPAIFAMSNPT 447 (481)
Q Consensus 401 ~e~V~~vkptvLIG~S~----~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt 447 (481)
.|+++. .|+++=.-- ..+.++++.++.|. +..++.=.|.-.
T Consensus 191 ~ell~~--aDvV~l~~p~~~~t~~li~~~~l~~mk----~ga~lin~arg~ 235 (307)
T 1wwk_A 191 ETLLKE--SDVVTIHVPLVESTYHLINEERLKLMK----KTAILINTSRGP 235 (307)
T ss_dssp HHHHHH--CSEEEECCCCSTTTTTCBCHHHHHHSC----TTCEEEECSCGG
T ss_pred HHHHhh--CCEEEEecCCChHHhhhcCHHHHhcCC----CCeEEEECCCCc
Confidence 888876 788874421 23678888888883 466777777633
No 72
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=91.28 E-value=0.23 Score=48.46 Aligned_cols=103 Identities=16% Similarity=0.232 Sum_probs=60.5
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccc---c-CCcCCcCCCCC
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKD---P-GDFMGLREGAS 399 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~---~-~~~~~~~~~~~ 399 (481)
.||.|+|||+.|.++|..|... |+. ..++++|++- ++ +......+.+. . .... ....+
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~-----g~~-----~~V~l~d~~~----~~--~~~~~~~l~~~~~~~~~~~~--~~~~d 63 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ-----GVA-----DDYVFIDANE----AK--VKADQIDFQDAMANLEAHGN--IVIND 63 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSSH----HH--HHHHHHHHHHHGGGSSSCCE--EEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC-----CEEEEEcCCH----HH--HHHHHHHHHhhhhhcCCCeE--EEeCC
Confidence 4899999999999999888653 541 4799999842 11 11111111100 0 0000 00235
Q ss_pred HHHHhcccCCcEEEeecCC-------CCCC-----------CHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 400 LLEVVRKVKPHVLLGLSGV-------GGVF-----------NEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 400 L~e~V~~vkptvLIG~S~~-------~g~F-----------t~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
+ ++++. +|++|=+... +|-. -+++++.|.+ ++...+|+-+|||..
T Consensus 64 ~-~~~~~--aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~-~~~~~~ii~~tNp~~ 126 (309)
T 1hyh_A 64 W-AALAD--ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKE-SGFHGVLVVISNPVD 126 (309)
T ss_dssp G-GGGTT--CSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHH-TTCCSEEEECSSSHH
T ss_pred H-HHhCC--CCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HCCCcEEEEEcCcHH
Confidence 6 67776 8988854443 2211 1578888854 677778888999987
No 73
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.26 E-value=0.24 Score=47.51 Aligned_cols=49 Identities=22% Similarity=0.335 Sum_probs=37.7
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 304 LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
-.|++.+++..+.+++. .+++|+|||.+|.++|..+.+ .| .+++++|++
T Consensus 103 ~~G~~~~L~~~~~~l~~---k~vlViGaGg~g~a~a~~L~~-----~G-------~~V~v~~R~ 151 (271)
T 1nyt_A 103 GVGLLSDLERLSFIRPG---LRILLIGAGGASRGVLLPLLS-----LD-------CAVTITNRT 151 (271)
T ss_dssp HHHHHHHHHHHTCCCTT---CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSS
T ss_pred HHHHHHHHHhcCcCcCC---CEEEEECCcHHHHHHHHHHHH-----cC-------CEEEEEECC
Confidence 55777888877877777 999999999888888777654 34 368888874
No 74
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=91.25 E-value=0.6 Score=45.04 Aligned_cols=35 Identities=14% Similarity=0.394 Sum_probs=27.7
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.||.|+|+|..|.++|..+.. .|... .+|+++|++
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~-----~g~~~----~~V~v~dr~ 38 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIA-----NGYDP----NRICVTNRS 38 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHH-----TTCCG----GGEEEECSS
T ss_pred CEEEEEcccHHHHHHHHHHHH-----CCCCC----CeEEEEeCC
Confidence 789999999999999988765 35432 468888874
No 75
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=91.24 E-value=0.31 Score=47.53 Aligned_cols=99 Identities=19% Similarity=0.212 Sum_probs=59.1
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc--------eeecCCCCCChhhhccccccCCcCCcC
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG--------LITKERKNLDPAAAPFAKDPGDFMGLR 395 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G--------Li~~~r~~l~~~k~~fA~~~~~~~~~~ 395 (481)
.||.|+|+|+.|..+|..|..+ | .+++++|+.- +...++ .....+ +. + ..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~~~i~~~Gl~~~~~-~~g~~~--~~-~------~~ 60 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-----G-------HCVSVVSRSDYETVKAKGIRIRSA-TLGDYT--FR-P------AA 60 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-----T-------CEEEEECSTTHHHHHHHCEEEEET-TTCCEE--EC-C------SC
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCChHHHHHhCCcEEeec-CCCcEE--Ee-e------ee
Confidence 5899999999999999888653 4 3688888752 111110 000000 00 0 01
Q ss_pred CCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 396 EGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 396 ~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
...++.++.+. +|++| ++. +--.++++++.++....+..+|+.+.|-..
T Consensus 61 ~~~~~~~~~~~--~DlVi-lav-K~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~ 109 (320)
T 3i83_A 61 VVRSAAELETK--PDCTL-LCI-KVVEGADRVGLLRDAVAPDTGIVLISNGID 109 (320)
T ss_dssp EESCGGGCSSC--CSEEE-ECC-CCCTTCCHHHHHTTSCCTTCEEEEECSSSS
T ss_pred eECCHHHcCCC--CCEEE-Eec-CCCChHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 12345555433 78877 554 344466889988654455677788999765
No 76
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=91.19 E-value=2.8 Score=43.68 Aligned_cols=147 Identities=18% Similarity=0.186 Sum_probs=92.3
Q ss_pred CCce-EEEeecCCCchHHHHHHHHhh-cCCccccCcc---hhHHHHHHHHHHHHHHh---------C---C---CCCCCC
Q 011618 263 WPKA-IVQFEDFQMKWAFETLERYRK-RFCMFNDDIQ---GTAGVALAGLLGTVRAQ---------G---L---SLTDFA 322 (481)
Q Consensus 263 ~P~~-~IqfEDf~~~naf~iL~ryr~-~~~~FNDDiQ---GTaaV~LAgll~Alr~~---------g---~---~l~dl~ 322 (481)
.|+. .|+.-=.+..| ..+ +..++ -+++||---- .+|=-++|.+++..|-. | + .-.+|.
T Consensus 78 ~p~Lk~I~~~~~G~d~-IDl-~~a~~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~ 155 (416)
T 3k5p_A 78 ANRLIAVGCFSVGTNQ-VEL-KAARKRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVR 155 (416)
T ss_dssp CTTCCEEEECSSCCTT-BCH-HHHHHTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCST
T ss_pred CCCcEEEEECccccCc-cCH-HHHHhcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCC
Confidence 4554 55544444433 222 33333 4888886433 45556788888887631 1 0 123566
Q ss_pred CceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHH
Q 011618 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (481)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (481)
+.++.|+|.|..|..+|+.+... |+ +++.+|+.. ..... -+ ....+|.|
T Consensus 156 gktvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~yd~~~-------~~~~~---~~---------~~~~sl~e 204 (416)
T 3k5p_A 156 GKTLGIVGYGNIGSQVGNLAESL-----GM-------TVRYYDTSD-------KLQYG---NV---------KPAASLDE 204 (416)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECTTC-------CCCBT---TB---------EECSSHHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEECCcc-------hhccc---Cc---------EecCCHHH
Confidence 69999999999999999987654 43 688888741 11100 00 11346889
Q ss_pred HhcccCCcEEEeecC----CCCCCCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 403 VVRKVKPHVLLGLSG----VGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 403 ~V~~vkptvLIG~S~----~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
+++. .|+++=.-- .-+.|+++.+..|. +..++.=.|.=..
T Consensus 205 ll~~--aDvV~lhvPlt~~T~~li~~~~l~~mk----~gailIN~aRG~v 248 (416)
T 3k5p_A 205 LLKT--SDVVSLHVPSSKSTSKLITEAKLRKMK----KGAFLINNARGSD 248 (416)
T ss_dssp HHHH--CSEEEECCCC-----CCBCHHHHHHSC----TTEEEEECSCTTS
T ss_pred HHhh--CCEEEEeCCCCHHHhhhcCHHHHhhCC----CCcEEEECCCChh
Confidence 8887 888874321 13788999999883 5778887776655
No 77
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=91.08 E-value=0.082 Score=52.64 Aligned_cols=106 Identities=17% Similarity=0.204 Sum_probs=62.6
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecC-CCCCChhhhccccccCCcCCcCCCCCHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (481)
.||.|+|||+.|.++|.++.. .|+- .++++|.+-=..++ ..++.+...+...+ ... ....++ +
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~-----~g~~------~v~L~Di~~~~l~~~~~~l~~~~~~~~~~-~~i---~~t~d~-~ 68 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQ-----KNLG------DVVLFDIVKNMPHGKALDTSHTNVMAYSN-CKV---SGSNTY-D 68 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC------EEEEECSSSSHHHHHHHHHHTHHHHHTCC-CCE---EEECCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC------eEEEEeCCHHHHHHHHHHHHhhhhhcCCC-cEE---EECCCH-H
Confidence 589999999999999888765 3541 39999975100000 00111111111111 000 112456 7
Q ss_pred HhcccCCcEEEeecCCC---CC----------------CCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 403 VVRKVKPHVLLGLSGVG---GV----------------FNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 403 ~V~~vkptvLIG~S~~~---g~----------------Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
+++. +|++|=+.+.| |. .-+++.+.|.+ +++.-+|+-.|||..
T Consensus 69 al~~--aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~iiv~tNP~~ 130 (322)
T 1t2d_A 69 DLAG--ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKK-NCPNAFIIVVTNPVD 130 (322)
T ss_dssp GGTT--CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHH-HCTTSEEEECSSSHH
T ss_pred HhCC--CCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHH-HCCCeEEEEecCChH
Confidence 8888 89998554333 31 35677777754 678888766799988
No 78
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=90.98 E-value=0.12 Score=44.08 Aligned_cols=32 Identities=34% Similarity=0.605 Sum_probs=26.0
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
..|+|+|||.||+..|..|.+ .|+ ++.++|+.
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~-----~G~-------~V~v~Ek~ 34 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKS 34 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 359999999999999998875 465 58888864
No 79
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=90.95 E-value=2.4 Score=42.09 Aligned_cols=148 Identities=21% Similarity=0.206 Sum_probs=88.5
Q ss_pred HhCCce-EEEeecCCCchHHHHHHHHh-hcCCccccCcch---hHHHHHHHHHHHHHHh-----------------CC-C
Q 011618 261 ARWPKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDIQG---TAGVALAGLLGTVRAQ-----------------GL-S 317 (481)
Q Consensus 261 ~~~P~~-~IqfEDf~~~naf~iL~ryr-~~~~~FNDDiQG---TaaV~LAgll~Alr~~-----------------g~-~ 317 (481)
...|+. .|+.--.+..|- . ++..+ ..+.+.|----. +|=-+++.+|+..|-. +. +
T Consensus 63 ~~~~~Lk~I~~~~~G~d~i-d-~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~ 140 (334)
T 2dbq_A 63 ENAPKLRIVANYAVGYDNI-D-IEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHP 140 (334)
T ss_dssp HTCTTCCEEEESSSCCTTB-C-HHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCT
T ss_pred hhCCCceEEEECCcccccc-c-HHHHHhCCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccccccc
Confidence 346876 788777666652 2 23333 348888864333 3444788888887732 10 1
Q ss_pred ----CCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCC
Q 011618 318 ----LTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMG 393 (481)
Q Consensus 318 ----l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~ 393 (481)
-.+|.+.+|.|+|+|..|..+|+.+... |. +++.+|++. +. . .+.... .
T Consensus 141 ~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~-----G~-------~V~~~d~~~------~~--~----~~~~~g-~-- 193 (334)
T 2dbq_A 141 KWFLGYDVYGKTIGIIGLGRIGQAIAKRAKGF-----NM-------RILYYSRTR------KE--E----VERELN-A-- 193 (334)
T ss_dssp TTTCCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSC------CH--H----HHHHHC-C--
T ss_pred ccccccCCCCCEEEEEccCHHHHHHHHHHHhC-----CC-------EEEEECCCc------ch--h----hHhhcC-c--
Confidence 1356669999999999999999988653 42 688888742 10 1 111000 0
Q ss_pred cCCCCCHHHHhcccCCcEEEeec-CC---CCCCCHHHHHHhhhcCCCCCEEEecCC
Q 011618 394 LREGASLLEVVRKVKPHVLLGLS-GV---GGVFNEEVLKAMRESDSVKPAIFAMSN 445 (481)
Q Consensus 394 ~~~~~~L~e~V~~vkptvLIG~S-~~---~g~Ft~evv~~Ma~~~~erPIIFaLSN 445 (481)
...++.|+++. +|+++=.- .. .+.++++++..|. +..+|.-.|.
T Consensus 194 --~~~~l~~~l~~--aDvVil~vp~~~~t~~~i~~~~~~~mk----~~ailIn~sr 241 (334)
T 2dbq_A 194 --EFKPLEDLLRE--SDFVVLAVPLTRETYHLINEERLKLMK----KTAILINIAR 241 (334)
T ss_dssp --EECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC----TTCEEEECSC
T ss_pred --ccCCHHHHHhh--CCEEEECCCCChHHHHhhCHHHHhcCC----CCcEEEECCC
Confidence 11357787776 77776332 11 2567777777773 4556665653
No 80
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=90.93 E-value=0.75 Score=46.92 Aligned_cols=158 Identities=13% Similarity=0.169 Sum_probs=93.0
Q ss_pred hHhHHHHHHHHHHhCCceEEEeecCCCchHHHHHHHHhhcCCcc-ccC---------cchhHHHHHHHHHHHHHHh-CC-
Q 011618 249 LSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLERYRKRFCMF-NDD---------IQGTAGVALAGLLGTVRAQ-GL- 316 (481)
Q Consensus 249 ~~~vdefv~av~~~~P~~~IqfEDf~~~naf~iL~ryr~~~~~F-NDD---------iQGTaaV~LAgll~Alr~~-g~- 316 (481)
++++..|.+++..+.-. -|-=+|++..- +.+...-+++.++ --- -.-||-=+.-++..+++.. |.
T Consensus 93 ~~~~r~~~~~~~~l~g~-~i~A~D~Gt~~--~~m~~l~~~~~~~tGK~~~~ggs~~~~~aTg~GV~~~~~~~~~~~~G~~ 169 (364)
T 1leh_A 93 EDMFRALGRFIQGLNGR-YITAEDVGTTV--DDMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFGSD 169 (364)
T ss_dssp HHHHHHHHHHHHTTTTS-EEBCBCTTCCH--HHHHHHHTTCSCBCSCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHhcCc-eEEcccCCCCH--HHHHHHHHhcchhcccccccCCCCCcccchhhHHHHHHHHHHHhhcccc
Confidence 45667777777777632 56777886543 3455555555221 111 1234444444555555553 64
Q ss_pred CCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCC
Q 011618 317 SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE 396 (481)
Q Consensus 317 ~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~ 396 (481)
+|+. .+|+|.|+|..|..+|+.+.+. |. ++++.|++ .+.+. .+++...- .
T Consensus 170 ~L~G---ktV~V~G~G~VG~~~A~~L~~~-----Ga-------kVvv~D~~------~~~l~----~~a~~~ga-----~ 219 (364)
T 1leh_A 170 SLEG---LAVSVQGLGNVAKALCKKLNTE-----GA-------KLVVTDVN------KAAVS----AAVAEEGA-----D 219 (364)
T ss_dssp CCTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC------HHHHH----HHHHHHCC-----E
T ss_pred CCCc---CEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEcCC------HHHHH----HHHHHcCC-----E
Confidence 5666 9999999999999999998754 42 57788852 11122 22221100 0
Q ss_pred CCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCC
Q 011618 397 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNP 446 (481)
Q Consensus 397 ~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNP 446 (481)
..++.+.. ..+.|++|=++ ..+.++++.++.| ...+|.--+|.
T Consensus 220 ~v~~~~ll-~~~~DIvip~a-~~~~I~~~~~~~l-----g~~iV~e~An~ 262 (364)
T 1leh_A 220 AVAPNAIY-GVTCDIFAPCA-LGAVLNDFTIPQL-----KAKVIAGSADN 262 (364)
T ss_dssp ECCGGGTT-TCCCSEEEECS-CSCCBSTTHHHHC-----CCSEECCSCSC
T ss_pred EEChHHHh-ccCCcEeeccc-hHHHhCHHHHHhC-----CCcEEEeCCCC
Confidence 11233322 25689999654 4689999988888 24577766664
No 81
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=90.87 E-value=0.4 Score=46.12 Aligned_cols=100 Identities=18% Similarity=0.108 Sum_probs=60.0
Q ss_pred eEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec--cceeecCCCCCChhhhccccc--cCCcCCcCCCC--
Q 011618 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK--DGLITKERKNLDPAAAPFAKD--PGDFMGLREGA-- 398 (481)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~--~GLi~~~r~~l~~~k~~fA~~--~~~~~~~~~~~-- 398 (481)
||.|+|+|..|..+|..|..+ | .+++++|+ +.-- +...++...+. ...+.......
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-----g-------~~V~~~~r~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~ 63 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-----G-------NEVRIWGTEFDTEI------LKSISAGREHPRLGVKLNGVEIFWPE 63 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-----C-------CEEEEECCGGGHHH------HHHHHTTCCBTTTTBCCCSEEEECGG
T ss_pred EEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEEccCCHHH------HHHHHHhCcCcccCccccceEEecHH
Confidence 799999999999999988654 4 36888887 3210 00000000000 00000000122
Q ss_pred CHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCCC
Q 011618 399 SLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPT 447 (481)
Q Consensus 399 ~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt 447 (481)
++.|+++. +|++|= +. +.-..+++++.++. ..+..+|..++|-.
T Consensus 64 ~~~~~~~~--~D~vi~-~v-~~~~~~~v~~~i~~-l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 64 QLEKCLEN--AEVVLL-GV-STDGVLPVMSRILP-YLKDQYIVLISKGL 107 (335)
T ss_dssp GHHHHHTT--CSEEEE-CS-CGGGHHHHHHHHTT-TCCSCEEEECCCSE
T ss_pred hHHHHHhc--CCEEEE-cC-ChHHHHHHHHHHhc-CCCCCEEEEEcCcC
Confidence 68888876 888773 32 33367889988865 55667888899876
No 82
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=90.78 E-value=0.21 Score=48.01 Aligned_cols=49 Identities=27% Similarity=0.394 Sum_probs=38.4
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 304 LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
-.|++.+++..+..++. .+++|+|||.+|.++|..|.. .| .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~~~~---~~vlvlGaGg~g~a~a~~L~~-----~G-------~~v~v~~R~ 151 (272)
T 1p77_A 103 GIGLVTDLQRLNWLRPN---QHVLILGAGGATKGVLLPLLQ-----AQ-------QNIVLANRT 151 (272)
T ss_dssp HHHHHHHHHHTTCCCTT---CEEEEECCSHHHHTTHHHHHH-----TT-------CEEEEEESS
T ss_pred HHHHHHHHHHhCCCcCC---CEEEEECCcHHHHHHHHHHHH-----CC-------CEEEEEECC
Confidence 46788888887777766 999999999988888877764 34 378888874
No 83
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=90.77 E-value=0.59 Score=45.60 Aligned_cols=115 Identities=11% Similarity=0.124 Sum_probs=65.0
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccc--c--ccCCcC-CcCCCC
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFA--K--DPGDFM-GLREGA 398 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA--~--~~~~~~-~~~~~~ 398 (481)
.||.|+|+|..|.++|..|..+... .. ....+++++|++.-.. .+......++... + +...+. +.....
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~-~~----~~~~~V~~~~r~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQ-LA----QFDPRVTMWVFEEDIG-GKKLTEIINTQHENVKYLPGHKLPPNVVAVP 82 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHH-CT----TEEEEEEEECCCCBSS-SSBHHHHHHHHSCCTTTSTTCCCCTTEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCc-cc----CCCCeEEEEEcChhhh-hhHHHHHHHhcCcccccCCcccCccCeEEEc
Confidence 6999999999999999999876421 00 0003688888753210 0000111110000 0 000000 001125
Q ss_pred CHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 399 SLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 399 ~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
++.|+++. +|++| ++. +....+++++.++....+..+|..++|-..
T Consensus 83 ~~~~~~~~--aD~Vi-lav-~~~~~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 83 DVVQAAED--ADILI-FVV-PHQFIGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp SHHHHHTT--CSEEE-ECC-CGGGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred CHHHHHcC--CCEEE-EeC-CHHHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence 68888886 88877 443 445778999988653345678888999554
No 84
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=90.75 E-value=0.29 Score=47.12 Aligned_cols=107 Identities=21% Similarity=0.316 Sum_probs=66.3
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhcc
Q 011618 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPF 384 (481)
Q Consensus 305 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~f 384 (481)
.|++.+++..+..++. .+++|+|+|.+|.++|..+.+. |. +|+++|++- +.-+.+
T Consensus 114 ~G~~~~l~~~~~~~~~---~~v~iiGaG~~g~aia~~L~~~-----g~-------~V~v~~r~~----------~~~~~l 168 (275)
T 2hk9_A 114 IGFLKSLKSLIPEVKE---KSILVLGAGGASRAVIYALVKE-----GA-------KVFLWNRTK----------EKAIKL 168 (275)
T ss_dssp HHHHHHHHHHCTTGGG---SEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSH----------HHHHHH
T ss_pred HHHHHHHHHhCCCcCC---CEEEEECchHHHHHHHHHHHHc-----CC-------EEEEEECCH----------HHHHHH
Confidence 3788888877876666 9999999999999998887653 42 688888741 111122
Q ss_pred ccccCCcCCcCCCCCHHHHhcccCCcEEEeecCCCCCCC--HHHHHHhhhcCCCCCEEEecCC
Q 011618 385 AKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFN--EEVLKAMRESDSVKPAIFAMSN 445 (481)
Q Consensus 385 A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft--~evv~~Ma~~~~erPIIFaLSN 445 (481)
++... . ....++.++++. +|++|-+.. ++... ++.+. . +...+..+|+-++.
T Consensus 169 ~~~~g-~---~~~~~~~~~~~~--aDiVi~atp-~~~~~~~~~~i~-~-~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 169 AQKFP-L---EVVNSPEEVIDK--VQVIVNTTS-VGLKDEDPEIFN-Y-DLIKKDHVVVDIIY 222 (275)
T ss_dssp TTTSC-E---EECSCGGGTGGG--CSEEEECSS-TTSSTTCCCSSC-G-GGCCTTSEEEESSS
T ss_pred HHHcC-C---eeehhHHhhhcC--CCEEEEeCC-CCCCCCCCCCCC-H-HHcCCCCEEEEcCC
Confidence 22110 0 011257777876 899997665 34321 12221 1 11345679999987
No 85
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=90.58 E-value=0.6 Score=46.25 Aligned_cols=113 Identities=19% Similarity=0.201 Sum_probs=67.3
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccC---CcCCcCCCCCH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPG---DFMGLREGASL 400 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~---~~~~~~~~~~L 400 (481)
.||.|+|||+.|..+|-.|.. .|+- ..++++|.+ .++ +......+.+... +.. . ...+
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~-----~~~~-----~ev~L~Di~----~~~--~~g~~~dl~~~~~~~~~~~-i-~~~~- 68 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMAL-----RQTA-----NELVLIDVF----KEK--AIGEAMDINHGLPFMGQMS-L-YAGD- 68 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTCS-----SEEEEECCC---------CCHHHHHHTTSCCCTTCEE-E-C--C-
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC-----CEEEEEeCC----hHH--HHHHHHHHHHhHHhcCCeE-E-EECC-
Confidence 689999999999998887654 3431 479999985 122 2222222222110 000 0 1123
Q ss_pred HHHhcccCCcEEEeecCCC---CC-------C----CHHHHHHhhhcCCCCCEEEecCCCCCCCCCCCCHHHHHhcc
Q 011618 401 LEVVRKVKPHVLLGLSGVG---GV-------F----NEEVLKAMRESDSVKPAIFAMSNPTMNGLFSCCVTTFFFYL 463 (481)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~---g~-------F----t~evv~~Ma~~~~erPIIFaLSNPt~~aE~~~t~eda~~wt 463 (481)
.+++++ +|++|=+.+.| |- . -+++++.|.+ ++...+|+-.|||.. .+.+-+++.+
T Consensus 69 ~~a~~~--aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~viv~tNPv~-----~~~~~~~k~s 137 (318)
T 1y6j_A 69 YSDVKD--CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMK-YYNHGVILVVSNPVD-----IITYMIQKWS 137 (318)
T ss_dssp GGGGTT--CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHH-HCCSCEEEECSSSHH-----HHHHHHHHHH
T ss_pred HHHhCC--CCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHH-hCCCcEEEEecCcHH-----HHHHHHHHHc
Confidence 667877 89988555444 31 1 2678888864 688888888999987 4455555554
No 86
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=90.57 E-value=0.23 Score=49.43 Aligned_cols=115 Identities=17% Similarity=0.214 Sum_probs=68.1
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecC-CCCCChhhhccccccCCcCCcCCCCCHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (481)
.||.|+|||+.|..+|-+|+.. ++ -..|+++|.+-=-..+ ..+|.+.. +|..+.. -..+-.+
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~~------v~~~~~~ 68 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ-----GI-----AEEFVIVDVVKDRTKGDALDLEDAQ-AFTAPKK------IYSGEYS 68 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHGGG-GGSCCCE------EEECCGG
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHHHHHHHHHHHHH-HhcCCeE------EEECCHH
Confidence 6999999999999988876543 43 1579999973100000 00122211 2322110 1123467
Q ss_pred HhcccCCcEEEeecCCCCC--------------CCHHHHHHhhhcCCCCCEEEecCCCCCCCCCCCCHHHHHhcc
Q 011618 403 VVRKVKPHVLLGLSGVGGV--------------FNEEVLKAMRESDSVKPAIFAMSNPTMNGLFSCCVTTFFFYL 463 (481)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~~~t~eda~~wt 463 (481)
++++ +|++|=+.+.|.. .-+++++.|.+ ++...+|+-.|||.. ...+-+++.+
T Consensus 69 a~~~--aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~-~~p~a~iiv~tNPv~-----~~t~~~~k~s 135 (318)
T 1ez4_A 69 DCKD--ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVD-SGFDGIFLVAANPVD-----ILTYATWKFS 135 (318)
T ss_dssp GGTT--CSEEEECCCC----------CHHHHHHHHHHHHHHHHH-TTCCSEEEECSSSHH-----HHHHHHHHHH
T ss_pred HhCC--CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCeEEEEeCCcHH-----HHHHHHHHHc
Confidence 7888 8999855544321 23456666644 789999999999988 4455565654
No 87
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=90.52 E-value=0.21 Score=49.90 Aligned_cols=115 Identities=16% Similarity=0.174 Sum_probs=68.0
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecC-CCCCChhhhccccccCCcCCcCCCCCHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (481)
.||.|+|||+.|..+|-+|+.. ++ -..++|+|.+-=-.++ ..+|.+.. +|..+.. -..+-.+
T Consensus 10 ~KI~IiGaG~vG~~la~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~~------i~~~~~~ 72 (326)
T 2zqz_A 10 QKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLSNAL-PFTSPKK------IYSAEYS 72 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTTG-GGSCCCE------EEECCGG
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHhHHHHHHHHHHH-HhcCCeE------EEECCHH
Confidence 6999999999999988876442 43 2579999984100000 00121111 2221110 1123467
Q ss_pred HhcccCCcEEEeecCCCCC--------------CCHHHHHHhhhcCCCCCEEEecCCCCCCCCCCCCHHHHHhcc
Q 011618 403 VVRKVKPHVLLGLSGVGGV--------------FNEEVLKAMRESDSVKPAIFAMSNPTMNGLFSCCVTTFFFYL 463 (481)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~~~t~eda~~wt 463 (481)
++++ +|++|=+.+.|.. .-+++++.|.+ ++...+|+-.|||.. ...+-+++.+
T Consensus 73 a~~~--aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~-~~p~a~iiv~tNPv~-----~~t~~~~k~s 139 (326)
T 2zqz_A 73 DAKD--ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVD-SGFNGIFLVAANPVD-----ILTYATWKLS 139 (326)
T ss_dssp GGGG--CSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHH-HTCCSEEEECSSSHH-----HHHHHHHHHH
T ss_pred HhCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HCCCeEEEEeCCcHH-----HHHHHHHHHc
Confidence 7888 8999855554432 12455666643 788999999999988 4455555554
No 88
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=90.45 E-value=0.29 Score=49.51 Aligned_cols=99 Identities=19% Similarity=0.306 Sum_probs=62.0
Q ss_pred CCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCC
Q 011618 320 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGAS 399 (481)
Q Consensus 320 dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~ 399 (481)
++.+.+++|+|+|..|..+|+.+... |. +++.+|++. . .+...++.+..... .. .....+
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~-----Ga-------~V~~~d~~~----~--~l~~~~~~~g~~~~-~~-~~~~~~ 224 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGM-----GA-------TVTVLDINI----D--KLRQLDAEFCGRIH-TR-YSSAYE 224 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESCH----H--HHHHHHHHTTTSSE-EE-ECCHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEeCCH----H--HHHHHHHhcCCeeE-ec-cCCHHH
Confidence 56669999999999999999887643 42 688888741 1 11111111211100 00 001235
Q ss_pred HHHHhcccCCcEEEeecCCC-----CCCCHHHHHHhhhcCCCCCEEEecC
Q 011618 400 LLEVVRKVKPHVLLGLSGVG-----GVFNEEVLKAMRESDSVKPAIFAMS 444 (481)
Q Consensus 400 L~e~V~~vkptvLIG~S~~~-----g~Ft~evv~~Ma~~~~erPIIFaLS 444 (481)
+.+.++. .|++|.+...| ..++++.++.|. +.-+|.-+|
T Consensus 225 l~~~l~~--aDvVi~~~~~p~~~t~~li~~~~l~~mk----~g~~iV~va 268 (377)
T 2vhw_A 225 LEGAVKR--ADLVIGAVLVPGAKAPKLVSNSLVAHMK----PGAVLVDIA 268 (377)
T ss_dssp HHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHTTSC----TTCEEEEGG
T ss_pred HHHHHcC--CCEEEECCCcCCCCCcceecHHHHhcCC----CCcEEEEEe
Confidence 7888876 89999876544 457999999994 345666666
No 89
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=90.35 E-value=0.13 Score=50.61 Aligned_cols=104 Identities=19% Similarity=0.278 Sum_probs=59.0
Q ss_pred eEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCC-CCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
||.|+|||+.|.++|..+.. .|+- ..++++|.+---.... .++.+.. +|..+. .. ...+ .++
T Consensus 2 kI~VIGaG~vG~~la~~la~-----~g~~-----~eV~L~D~~~~~~~~~~~~l~~~~-~~~~~~-~i----~~~~-~~a 64 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVL-----RGSC-----SELVLVDRDEDRAQAEAEDIAHAA-PVSHGT-RV----WHGG-HSE 64 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEECSSHHHHHHHHHHHTTSC-CTTSCC-EE----EEEC-GGG
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCCC-----CEEEEEeCCHHHHHHHHHhhhhhh-hhcCCe-EE----EECC-HHH
Confidence 89999999999999977653 3531 4799999852100000 0111100 111110 00 0123 466
Q ss_pred hcccCCcEEEeecCCCCC--------------CCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 404 VRKVKPHVLLGLSGVGGV--------------FNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 404 V~~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
++. +|++|=+.+.|.. .-+++++.|++ ++..-+|+-.|||..
T Consensus 65 ~~~--aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~~~vi~~tNP~~ 120 (304)
T 2v6b_A 65 LAD--AQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITR-AAPDAVLLVTSNPVD 120 (304)
T ss_dssp GTT--CSEEEECC------------CHHHHHHHHHHHHHHHHH-HCSSSEEEECSSSHH
T ss_pred hCC--CCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHH-hCCCeEEEEecCchH
Confidence 777 8998855443332 22678888865 677778777999987
No 90
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=90.35 E-value=0.091 Score=52.36 Aligned_cols=106 Identities=16% Similarity=0.239 Sum_probs=61.3
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecC-CCCCChhhhccccccCCcCCcCCCCCHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (481)
.||.|+|||+.|.++|..+.. .|+- .++++|.+-=.... ..++.+...++... ... ....++ +
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~-----~g~~------~V~L~Di~~~~l~~~~~~l~~~~~~~~~~-~~i---~~t~d~-~ 78 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQ-----KDLG------DVYMFDIIEGVPQGKALDLNHCMALIGSP-AKI---FGENNY-E 78 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC------EEEEECSSTTHHHHHHHHHHHHHHHHTCC-CCE---EEESCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC------eEEEEECCHHHHHHHHHHHHhHhhccCCC-CEE---EECCCH-H
Confidence 589999999999999977664 3541 39999985110000 00111111111111 011 112456 7
Q ss_pred HhcccCCcEEEeecCCC---CC-----------CCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 403 VVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 403 ~V~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
+++. +|++|=+.+.| |. .-+++.+.+.+ ++..-+|+--|||..
T Consensus 79 al~~--aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~-~~p~a~viv~tNP~~ 135 (328)
T 2hjr_A 79 YLQN--SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGK-YCPNAFVICITNPLD 135 (328)
T ss_dssp GGTT--CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHH-HCTTCEEEECCSSHH
T ss_pred HHCC--CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHH-HCCCeEEEEecCchH
Confidence 8887 89988554333 32 24566777754 677777766799987
No 91
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=90.34 E-value=1.4 Score=44.53 Aligned_cols=96 Identities=18% Similarity=0.214 Sum_probs=62.0
Q ss_pred HhCCce-EEEeecCCCchH-HHHHHHHhhcCCccccCc---chhHHHHHHHHHHHHHHh---------C--------CCC
Q 011618 261 ARWPKA-IVQFEDFQMKWA-FETLERYRKRFCMFNDDI---QGTAGVALAGLLGTVRAQ---------G--------LSL 318 (481)
Q Consensus 261 ~~~P~~-~IqfEDf~~~na-f~iL~ryr~~~~~FNDDi---QGTaaV~LAgll~Alr~~---------g--------~~l 318 (481)
...|+. .|+.--.+..|- .+-+.+.+..+.+.|--- +.+|=-+++.+++..|-. | ..-
T Consensus 80 ~~~~~Lk~I~~~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~ 159 (364)
T 2j6i_A 80 DKAKKLKLVVVAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDA 159 (364)
T ss_dssp HHCTTCCEEEESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTC
T ss_pred hhCCCCeEEEECCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCc
Confidence 346886 888888888774 233333222477766432 344555788888887721 0 112
Q ss_pred CCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 319 TDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 319 ~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|.+.+|.|+|.|..|..+|+.+... |+ ++++.+|+.
T Consensus 160 ~~l~g~tvgIIG~G~IG~~vA~~l~~~-----G~------~~V~~~d~~ 197 (364)
T 2j6i_A 160 YDIEGKTIATIGAGRIGYRVLERLVPF-----NP------KELLYYDYQ 197 (364)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGG-----CC------SEEEEECSS
T ss_pred ccCCCCEEEEECcCHHHHHHHHHHHhC-----CC------cEEEEECCC
Confidence 345559999999999999999987643 43 238888864
No 92
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=90.21 E-value=0.3 Score=42.38 Aligned_cols=32 Identities=28% Similarity=0.547 Sum_probs=26.3
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|+|..|..+|+.+... | .+++++|++
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~-----g-------~~V~vid~~ 51 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSS-----G-------HSVVVVDKN 51 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECC
Confidence 7999999999999999887643 4 268888874
No 93
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=90.00 E-value=0.3 Score=47.93 Aligned_cols=114 Identities=17% Similarity=0.172 Sum_probs=68.5
Q ss_pred eEEEeC-ccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec--cceeecC-CCCCChhhhccccccCCcCCcCCCCCH
Q 011618 325 KIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK--DGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASL 400 (481)
Q Consensus 325 riv~~G-AGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~--~GLi~~~-r~~l~~~k~~fA~~~~~~~~~~~~~~L 400 (481)
||+|.| ||..|..++..|+. .|+- ..+.++|. +-=-.++ ..++.+... +..+.. . ...+
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~-----~~~~-----~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~~~-v----~~~~- 64 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIAL-----RDIA-----DEVVFVDIPDKEDDTVGQAADTNHGIA-YDSNTR-V----RQGG- 64 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TTCC-----SEEEEECCGGGHHHHHHHHHHHHHHHT-TTCCCE-E----EECC-
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCCC-----CEEEEEcCCCChhhHHHHHHHHHHHHh-hCCCcE-E----EeCC-
Confidence 899999 99999998887654 2431 46999997 3100000 011222111 111110 0 0123
Q ss_pred HHHhcccCCcEEEeecCCC---CC-----------CCHHHHHHhhhcCCCCCEEEecCCCCCCCCCCCCHHHHHhcc
Q 011618 401 LEVVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNGLFSCCVTTFFFYL 463 (481)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~~~t~eda~~wt 463 (481)
.+++++ +|++|=+.+.+ |- .+++++++|.+ ++.+.+|+--|||.. ...+-+++.+
T Consensus 65 ~~a~~~--aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~-~~p~~~viv~SNPv~-----~~~~~~~~~~ 133 (303)
T 1o6z_A 65 YEDTAG--SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDE-HNDDYISLTTSNPVD-----LLNRHLYEAG 133 (303)
T ss_dssp GGGGTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHT-TCSCCEEEECCSSHH-----HHHHHHHHHS
T ss_pred HHHhCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HCCCcEEEEeCChHH-----HHHHHHHHHc
Confidence 677887 89998666544 32 46778888864 788999999999987 4445555544
No 94
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=90.00 E-value=0.14 Score=54.32 Aligned_cols=121 Identities=18% Similarity=0.214 Sum_probs=70.2
Q ss_pred ceEEEeCccHHHHH--HHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccc-cccCCcCCcCCCCCH
Q 011618 324 QKIVVVGAGSAGLG--VLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFA-KDPGDFMGLREGASL 400 (481)
Q Consensus 324 ~riv~~GAGsAg~G--iA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA-~~~~~~~~~~~~~~L 400 (481)
.||.|+|||+.|.| +|..|+.. .++ +-..++|+|.+-=... ........+. +...+. ......++
T Consensus 4 ~KIaVIGAGsVg~g~ala~~La~~----~~l----~~~eV~L~Di~~e~l~---~~~~~~~~~l~~~~~~~-~I~~ttD~ 71 (480)
T 1obb_A 4 VKIGIIGAGSAVFSLRLVSDLCKT----PGL----SGSTVTLMDIDEERLD---AILTIAKKYVEEVGADL-KFEKTMNL 71 (480)
T ss_dssp CEEEEETTTCHHHHHHHHHHHHTC----GGG----TTCEEEEECSCHHHHH---HHHHHHHHHHHHTTCCC-EEEEESCH
T ss_pred CEEEEECCCchHHHHHHHHHHHhc----CcC----CCCEEEEEeCCHHHHH---HHHHHHHHHhccCCCCc-EEEEECCH
Confidence 69999999996544 46666531 111 1257999998531111 0111111111 100010 01123579
Q ss_pred HHHhcccCCcEEEeecCC---------------CCCCC-------------------------HHHHHHhhhcCCCCCEE
Q 011618 401 LEVVRKVKPHVLLGLSGV---------------GGVFN-------------------------EEVLKAMRESDSVKPAI 440 (481)
Q Consensus 401 ~e~V~~vkptvLIG~S~~---------------~g~Ft-------------------------~evv~~Ma~~~~erPII 440 (481)
.+++++ +|++|=+.++ .|.|. +++++.|.+ ++...+|
T Consensus 72 ~eal~d--AD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~-~~P~A~i 148 (480)
T 1obb_A 72 DDVIID--ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEK-LSPKAWY 148 (480)
T ss_dssp HHHHTT--CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHH-HCTTCEE
T ss_pred HHHhCC--CCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHH-HCCCeEE
Confidence 899998 8998855432 13433 688889964 9999999
Q ss_pred EecCCCCCCCCCCCCHHHHHhccc
Q 011618 441 FAMSNPTMNGLFSCCVTTFFFYLM 464 (481)
Q Consensus 441 FaLSNPt~~aE~~~t~eda~~wt~ 464 (481)
+-.|||.. +..+-+.++..
T Consensus 149 i~~TNPvd-----i~t~~~~k~p~ 167 (480)
T 1obb_A 149 LQAANPIF-----EGTTLVTRTVP 167 (480)
T ss_dssp EECSSCHH-----HHHHHHHHHSC
T ss_pred EEeCCcHH-----HHHHHHHHCCC
Confidence 99999997 44445555443
No 95
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=89.99 E-value=0.15 Score=55.76 Aligned_cols=37 Identities=22% Similarity=0.398 Sum_probs=31.6
Q ss_pred CCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
|++.||+|+|||..|..+|+.|+.+++ .+|.++|.+=
T Consensus 324 L~~arVLIVGaGGLGs~vA~~La~aGV-----------G~ItLvD~D~ 360 (615)
T 4gsl_A 324 IKNTKVLLLGAGTLGCYVSRALIAWGV-----------RKITFVDNGT 360 (615)
T ss_dssp HHTCEEEEECCSHHHHHHHHHHHHTTC-----------CEEEEECCCB
T ss_pred HhCCeEEEECCCHHHHHHHHHHHHcCC-----------CEEEEEcCCC
Confidence 333999999999999999999987755 6899999863
No 96
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=89.87 E-value=0.65 Score=45.47 Aligned_cols=100 Identities=15% Similarity=0.135 Sum_probs=57.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
.||.|+|+|..|..+|..|..+ |... ..+++++|+.- ++ ...+.+.+.. .....+..|+
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~-----G~~~---~~~V~v~~r~~----~~----~~~~~l~~~G-----~~~~~~~~e~ 81 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAA-----GVLA---AHKIMASSPDM----DL----ATVSALRKMG-----VKLTPHNKET 81 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHT-----TSSC---GGGEEEECSCT----TS----HHHHHHHHHT-----CEEESCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC-----CCCC---cceEEEECCCc----cH----HHHHHHHHcC-----CEEeCChHHH
Confidence 6899999999999999988653 4210 13588777631 00 0111111110 0112357777
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 404 V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
++. +|++| ++. +....+++++.++....+..+|..++|..+
T Consensus 82 ~~~--aDvVi-lav-~~~~~~~vl~~l~~~l~~~~ivvs~s~gi~ 122 (322)
T 2izz_A 82 VQH--SDVLF-LAV-KPHIIPFILDEIGADIEDRHIVVSCAAGVT 122 (322)
T ss_dssp HHH--CSEEE-ECS-CGGGHHHHHHHHGGGCCTTCEEEECCTTCC
T ss_pred hcc--CCEEE-EEe-CHHHHHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 776 67666 332 334566777777543344557777888766
No 97
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=89.82 E-value=0.6 Score=46.19 Aligned_cols=110 Identities=19% Similarity=0.220 Sum_probs=67.1
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCC-CCCChhhhccccccCCcCCcCCCCCHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (481)
.||.|+|||..|.++|..++.. |+- ..++|+|.+-= ..+. .++.+ +..+ .. ....++ +
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-----g~~-----~ev~L~Di~~~-~~g~a~dl~~----~~~~--~i---~~t~d~-~ 73 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-----GIA-----DRLVLLDLSEG-TKGATMDLEI----FNLP--NV---EISKDL-S 73 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECCC------CHHHHHH----HTCT--TE---EEESCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHhc-----CCC-----CEEEEEcCCcc-hHHHHHHHhh----hcCC--Ce---EEeCCH-H
Confidence 6899999999999999988643 431 57999998531 1111 01111 1111 11 112466 7
Q ss_pred HhcccCCcEEEeecCCC--CC-----------CCHHHHHHhhhcCCCCCEEEecCCCCCCCCCCCCHHHHHhc
Q 011618 403 VVRKVKPHVLLGLSGVG--GV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNGLFSCCVTTFFFY 462 (481)
Q Consensus 403 ~V~~vkptvLIG~S~~~--g~-----------Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~~~t~eda~~w 462 (481)
+++. +|++|=..+.+ |- .-+++++.|.+ ++...+|+-.|||.. ...+-+++.
T Consensus 74 ~l~~--aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~-~~p~a~iiv~sNP~~-----~~t~~~~~~ 138 (303)
T 2i6t_A 74 ASAH--SKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGH-YSQHSVLLVASQPVE-----IMTYVTWKL 138 (303)
T ss_dssp GGTT--CSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHH-HTTTCEEEECSSSHH-----HHHHHHHHH
T ss_pred HHCC--CCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCeEEEEcCChHH-----HHHHHHHHh
Confidence 7887 89998554432 21 13567777854 788999888999987 344455554
No 98
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=89.77 E-value=1.6 Score=45.38 Aligned_cols=167 Identities=19% Similarity=0.238 Sum_probs=103.0
Q ss_pred ChhhhhHhHHHHHHHHHHhC-CceEEEeecCCCchHHH---HHHHHhh---cC-C---ccccC----------cchhHHH
Q 011618 244 EGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWAFE---TLERYRK---RF-C---MFNDD----------IQGTAGV 302 (481)
Q Consensus 244 ~g~~Y~~~vdefv~av~~~~-P~~~IqfEDf~~~naf~---iL~ryr~---~~-~---~FNDD----------iQGTaaV 302 (481)
+.+|-..+...|+.++...- |..-|-=+|++.. +.. +.+.|.. .. + ++--+ -.-||-=
T Consensus 115 s~~e~~~~~r~f~~~l~~~~g~~~dv~a~D~gt~-~~~m~~~~~~y~~~~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~G 193 (419)
T 1gtm_A 115 SDREKERLARGYIRAIYDVISPYEDIPAPDVYTN-PQIMAWMMDEYETISRRKTPAFGIITGKPLSIGGSLGRIEATARG 193 (419)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTTSSCGGGGCSSCCGGGTCCTTTTTHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEeCCCCCCC-HHHHHHHHHHHHHhhCCCCCccceEecCcchhCCCCCCCcchhhH
Confidence 45667778899999998877 7878888999873 222 3455543 21 2 33322 1236655
Q ss_pred HHHHHHHHHHHhCCC-CCCCCCceEEEeCccHHHHHHHHHHHH-HHHHHcCCChhhhcCeEEEE-eccceeecCCC-CCC
Q 011618 303 ALAGLLGTVRAQGLS-LTDFADQKIVVVGAGSAGLGVLKMAVQ-AAARMAGNNDAFARNKFFLL-DKDGLITKERK-NLD 378 (481)
Q Consensus 303 ~LAgll~Alr~~g~~-l~dl~~~riv~~GAGsAg~GiA~ll~~-~~~~~~Gls~eeA~~~i~lv-D~~GLi~~~r~-~l~ 378 (481)
+.-++-.+++..|.+ |+. .++.|.|.|..|..+|+++.. . |+ +++.+ |+.|-+..... +++
T Consensus 194 v~~~~~~~~~~~G~~~l~g---ktvgI~G~G~VG~~vA~~l~~~~-----G~-------kVv~~sD~~g~~~~~~gvdl~ 258 (419)
T 1gtm_A 194 ASYTIREAAKVLGWDTLKG---KTIAIQGYGNAGYYLAKIMSEDF-----GM-------KVVAVSDSKGGIYNPDGLNAD 258 (419)
T ss_dssp HHHHHHHHHHHTTCSCSTT---CEEEEECCSHHHHHHHHHHHHTT-----CC-------EEEEEECSSCEEEEEEEECHH
T ss_pred HHHHHHHHHHHhCCcccCC---CEEEEEcCCHHHHHHHHHHHHhc-----CC-------EEEEEeCCCccccCccCCCHH
Confidence 566777888888887 766 999999999999999998765 3 43 45544 88775543210 111
Q ss_pred hhhhcccccc---CCcCCcCCCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHh
Q 011618 379 PAAAPFAKDP---GDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAM 430 (481)
Q Consensus 379 ~~k~~fA~~~---~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M 430 (481)
+..+ ++... .+... ....+- +.+...|+|+||=++. ++..+++-++++
T Consensus 259 ~L~~-~~d~~~~l~~l~~-t~~i~~-~~l~~mk~dilIn~Ar-G~~Vde~a~~aL 309 (419)
T 1gtm_A 259 EVLK-WKNEHGSVKDFPG-ATNITN-EELLELEVDVLAPAAI-EEVITKKNADNI 309 (419)
T ss_dssp HHHH-HHHHHSSSTTCTT-SEEECH-HHHHHSCCSEEEECSC-SCCBCTTGGGGC
T ss_pred HHHH-HHHhcCEeecCcc-CeeeCH-HHHHhCCCCEEEECCC-cccCCHHHHHHh
Confidence 1111 11000 00000 011122 3356678999998885 799999987655
No 99
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=89.70 E-value=0.27 Score=46.19 Aligned_cols=96 Identities=15% Similarity=0.160 Sum_probs=54.3
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
.||.|+|+|..|..+|..+... |. +.++++|++. +.+. .+++... .....++.|+
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~~~~------~~~~----~~~~~~g----~~~~~~~~~~ 65 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRK-----GF------RIVQVYSRTE------ESAR----ELAQKVE----AEYTTDLAEV 65 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSH------HHHH----HHHHHTT----CEEESCGGGS
T ss_pred CeEEEEcCCHHHHHHHHHHHHC-----CC------eEEEEEeCCH------HHHH----HHHHHcC----CceeCCHHHH
Confidence 7999999999999999987653 43 2377777631 0111 1111100 0012346666
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 404 V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
++. +|++|=+. .+.. .+++++.+.+...+..+|.-+||-.+
T Consensus 66 ~~~--~Dvvi~av-~~~~-~~~v~~~l~~~~~~~~ivv~~s~~~~ 106 (266)
T 3d1l_A 66 NPY--AKLYIVSL-KDSA-FAELLQGIVEGKREEALMVHTAGSIP 106 (266)
T ss_dssp CSC--CSEEEECC-CHHH-HHHHHHHHHTTCCTTCEEEECCTTSC
T ss_pred hcC--CCEEEEec-CHHH-HHHHHHHHHhhcCCCcEEEECCCCCc
Confidence 654 67777333 2232 37777776532335567777776544
No 100
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=89.66 E-value=0.42 Score=47.57 Aligned_cols=114 Identities=14% Similarity=0.212 Sum_probs=63.1
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhh-----ccccccCCc-CCcCCC
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAA-----PFAKDPGDF-MGLREG 397 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~-----~fA~~~~~~-~~~~~~ 397 (481)
.||.|+|+|..|.++|..|..+... .. .-..+++++|+..-+. .+......++ .|- +.... .+....
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~-~~----~~~~~V~~~~r~~~~~-~~~~~~~l~~~~~~~~~~-~~~~~~~~i~~~ 94 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKN-NY----LFENEVRMWIRDEFVN-GERMVDIINNKHENTKYL-KGVPLPHNIVAH 94 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHH-CT----TBCSCEEEECCSCC----CCHHHHHHHHCBCTTTS-TTCBCCTTEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCc-cC----CCCCeEEEEECChhhh-hHHHHHHHHhcCcccccC-CcccCcCCeEEE
Confidence 4899999999999999999876531 00 0003688888753210 0001111110 000 00000 000112
Q ss_pred CCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhh----cCCCCCEEEecCCCCC
Q 011618 398 ASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRE----SDSVKPAIFAMSNPTM 448 (481)
Q Consensus 398 ~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~----~~~erPIIFaLSNPt~ 448 (481)
.++.|+++. +|++| ++. +.-..+++++.++. ...+..+|..++|-.+
T Consensus 95 ~~~~ea~~~--aDvVi-lav-~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~ 145 (375)
T 1yj8_A 95 SDLASVIND--ADLLI-FIV-PCQYLESVLASIKESESIKIASHAKAISLTKGFI 145 (375)
T ss_dssp SSTHHHHTT--CSEEE-ECC-CHHHHHHHHHHHTC---CCCCTTCEEEECCCSCE
T ss_pred CCHHHHHcC--CCEEE-EcC-CHHHHHHHHHHHhhhhhccCCCCCEEEEeCCccc
Confidence 467888876 78777 332 34577888888853 3345668888998654
No 101
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=89.58 E-value=0.61 Score=46.22 Aligned_cols=122 Identities=15% Similarity=0.092 Sum_probs=71.0
Q ss_pred ceEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc--ce---eecCCCCCChhhhccccccCCcCCcCCC
Q 011618 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD--GL---ITKERKNLDPAAAPFAKDPGDFMGLREG 397 (481)
Q Consensus 324 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~--GL---i~~~r~~l~~~k~~fA~~~~~~~~~~~~ 397 (481)
.||+|.|| |..|..++..|+. .|+-..+-...++++|.+ .. +.....+|.+.-.++..+. ...
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~-----~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i------~~~ 74 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIAN-----GDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGM------TAH 74 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEE------EEE
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcE------EEe
Confidence 69999998 9999998887654 243110112369999975 10 0000001111000121111 123
Q ss_pred CCHHHHhcccCCcEEEeecCCC---CC-----------CCHHHHHHhhhcCC-CCCEEEecCCCCCCCCCCCCHHHHHhc
Q 011618 398 ASLLEVVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDS-VKPAIFAMSNPTMNGLFSCCVTTFFFY 462 (481)
Q Consensus 398 ~~L~e~V~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~~-erPIIFaLSNPt~~aE~~~t~eda~~w 462 (481)
.++.+++++ .|++|=+.+.+ |- .++++++.+.+ ++ .+.+|+-.|||.. .+..-+.+.
T Consensus 75 ~~~~~al~~--aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~-~~~p~a~ii~~SNPv~-----~~t~~~~~~ 146 (329)
T 1b8p_A 75 ADPMTAFKD--ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDA-VASRNIKVLVVGNPAN-----TNAYIAMKS 146 (329)
T ss_dssp SSHHHHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HSCTTCEEEECSSSHH-----HHHHHHHHT
T ss_pred cCcHHHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hcCCCeEEEEccCchH-----HHHHHHHHH
Confidence 569999998 89988555544 31 35678888865 64 6767777899986 555566666
Q ss_pred cc
Q 011618 463 LM 464 (481)
Q Consensus 463 t~ 464 (481)
+.
T Consensus 147 ~~ 148 (329)
T 1b8p_A 147 AP 148 (329)
T ss_dssp CT
T ss_pred cC
Confidence 53
No 102
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=89.53 E-value=0.12 Score=42.87 Aligned_cols=33 Identities=21% Similarity=0.457 Sum_probs=25.9
Q ss_pred CceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
..+|+|+|+|..|..+|+.+.. .|. +++++|++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~-----~g~-------~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHR-----MGH-------EVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-----TTC-------CCEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 3789999999999999888764 342 57888874
No 103
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=89.46 E-value=0.28 Score=47.03 Aligned_cols=95 Identities=14% Similarity=0.148 Sum_probs=57.2
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
.||.|+|+|..|.++|..+... |. +++++|++- +....+++.. .....++.|+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~d~~~----------~~~~~~~~~g-----~~~~~~~~~~ 56 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA-----GY-------LLNVFDLVQ----------SAVDGLVAAG-----ASAARSARDA 56 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSSH----------HHHHHHHHTT-----CEECSSHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHhC-----CC-------eEEEEcCCH----------HHHHHHHHCC-----CeEcCCHHHH
Confidence 5899999999999999988753 43 678777631 1111222211 0123578888
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHH---HhhhcCCCCCEEEecCCCCC
Q 011618 404 VRKVKPHVLLGLSGVGGVFNEEVLK---AMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 404 V~~vkptvLIG~S~~~g~Ft~evv~---~Ma~~~~erPIIFaLSNPt~ 448 (481)
++. +|++|=+- ....-.++++. .+.+...+..+|..+|+-.+
T Consensus 57 ~~~--aDvvi~~v-p~~~~~~~v~~~~~~~~~~l~~~~~vi~~st~~~ 101 (302)
T 2h78_A 57 VQG--ADVVISML-PASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAP 101 (302)
T ss_dssp HTT--CSEEEECC-SCHHHHHHHHHSSSCGGGSSCSSCEEEECSCCCH
T ss_pred HhC--CCeEEEEC-CCHHHHHHHHcCchhHHhcCCCCcEEEECCCCCH
Confidence 887 78877322 11223455555 44333445668888876554
No 104
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=89.27 E-value=0.41 Score=48.05 Aligned_cols=31 Identities=23% Similarity=0.364 Sum_probs=25.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
.||.|+|||..|.|||..+..+ |+ ++.++|.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~-----G~-------~V~l~D~ 37 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDI 37 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECS
T ss_pred CeEEEECCcHHHHHHHHHHHhC-----CC-------eEEEEEC
Confidence 6899999999999999887754 54 5778885
No 105
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=89.22 E-value=0.11 Score=54.28 Aligned_cols=122 Identities=14% Similarity=0.170 Sum_probs=71.3
Q ss_pred ceEEEeCccHH-HHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCC-CCCChhhhcccc-ccCCcCCcCCCCCH
Q 011618 324 QKIVVVGAGSA-GLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAK-DPGDFMGLREGASL 400 (481)
Q Consensus 324 ~riv~~GAGsA-g~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~k~~fA~-~~~~~~~~~~~~~L 400 (481)
.||.|+|||+. |.+++..|+.. ..++.. ..++|+|.+--. ++ +.+......+.. -..+.. .....++
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~---~~~l~~----~ev~L~Di~~~~--e~~~~~~~~~~~~~~~~~~~~~-i~~t~D~ 77 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKR---YHELPV----GELWLVDIPEGK--EKLEIVGALAKRMVEKAGVPIE-IHLTLDR 77 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHT---TTTCCE----EEEEEECCGGGH--HHHHHHHHHHHHHHHHTTCCCE-EEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCCCCC----CEEEEEEcCCCh--HHHHHHHHHHHHHHhhcCCCcE-EEEeCCH
Confidence 69999999997 44444444431 144421 579999985300 11 001111112211 000100 0123579
Q ss_pred HHHhcccCCcEEEeecCCCCC----------------------------------CCHHHHHHhhhcCCCCCEEEecCCC
Q 011618 401 LEVVRKVKPHVLLGLSGVGGV----------------------------------FNEEVLKAMRESDSVKPAIFAMSNP 446 (481)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~g~----------------------------------Ft~evv~~Ma~~~~erPIIFaLSNP 446 (481)
.|++++ +|++|=..++++. .-+++++.|.+ ++...+|+-.|||
T Consensus 78 ~eal~g--AD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~-~~P~a~ii~~tNP 154 (450)
T 1s6y_A 78 RRALDG--ADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEE-LCPDAWLINFTNP 154 (450)
T ss_dssp HHHHTT--CSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECSSS
T ss_pred HHHhCC--CCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHH-HCCCeEEEEeCCc
Confidence 999998 8999866554321 13578888864 9999999999999
Q ss_pred CCCCCCCCCHHHHHhcc
Q 011618 447 TMNGLFSCCVTTFFFYL 463 (481)
Q Consensus 447 t~~aE~~~t~eda~~wt 463 (481)
.. +..+-+++.+
T Consensus 155 vd-----ivT~a~~k~~ 166 (450)
T 1s6y_A 155 AG-----MVTEAVLRYT 166 (450)
T ss_dssp HH-----HHHHHHHHHC
T ss_pred HH-----HHHHHHHHhC
Confidence 87 4445555665
No 106
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=89.18 E-value=0.17 Score=48.28 Aligned_cols=34 Identities=26% Similarity=0.457 Sum_probs=29.8
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.||+|+|+|..|..+|+.|+.+.+ ++|.++|.+-
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv-----------~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGV-----------GNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC-----------SEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCC-----------CeEEEEcCCC
Confidence 899999999999999999987644 5899999974
No 107
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=89.14 E-value=5.8 Score=40.79 Aligned_cols=145 Identities=16% Similarity=0.168 Sum_probs=86.4
Q ss_pred CCce-EEEeecCCCchHHHHHHHHhh-cCCccccCcc---hhHHHHHHHHHHHHHHh---------C---C---CCCCCC
Q 011618 263 WPKA-IVQFEDFQMKWAFETLERYRK-RFCMFNDDIQ---GTAGVALAGLLGTVRAQ---------G---L---SLTDFA 322 (481)
Q Consensus 263 ~P~~-~IqfEDf~~~naf~iL~ryr~-~~~~FNDDiQ---GTaaV~LAgll~Alr~~---------g---~---~l~dl~ 322 (481)
.|+. .|+.-=.+..|- . ++..++ -++|||---- .+|=-++|.+++..|-. | + .-.+|.
T Consensus 67 ~~~Lk~I~~~~~G~d~i-D-~~~a~~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el~ 144 (404)
T 1sc6_A 67 AEKLVAIGAFAIGTNQV-D-LDAAAKRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEAR 144 (404)
T ss_dssp CSSCCEEEECSSCCTTB-C-HHHHHHTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCST
T ss_pred CCCCcEEEECCcccCcc-C-HHHHHhCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCccccC
Confidence 4665 555544555442 1 223333 4888886543 44555789999888731 1 0 123566
Q ss_pred CceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHH
Q 011618 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (481)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (481)
+.++.|+|-|..|..+|+.+... |+ +++.+|+..- ..+. -+ ....+|.|
T Consensus 145 gktlGiIGlG~IG~~vA~~l~~~-----G~-------~V~~~d~~~~-----~~~~-----~~---------~~~~~l~e 193 (404)
T 1sc6_A 145 GKKLGIIGYGHIGTQLGILAESL-----GM-------YVYFYDIENK-----LPLG-----NA---------TQVQHLSD 193 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSCC-----CCCT-----TC---------EECSCHHH
T ss_pred CCEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEEcCCch-----hccC-----Cc---------eecCCHHH
Confidence 69999999999999999988754 43 6888887421 0000 00 01235777
Q ss_pred HhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCEEEecCCC
Q 011618 403 VVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNP 446 (481)
Q Consensus 403 ~V~~vkptvLIG~S----~~~g~Ft~evv~~Ma~~~~erPIIFaLSNP 446 (481)
+++. .|+++=.- ..-+.|+++.+..|. +..++.=.|.=
T Consensus 194 ll~~--aDvV~l~~P~t~~t~~li~~~~l~~mk----~ga~lIN~aRg 235 (404)
T 1sc6_A 194 LLNM--SDVVSLHVPENPSTKNMMGAKEISLMK----PGSLLINASRG 235 (404)
T ss_dssp HHHH--CSEEEECCCSSTTTTTCBCHHHHHHSC----TTEEEEECSCS
T ss_pred HHhc--CCEEEEccCCChHHHHHhhHHHHhhcC----CCeEEEECCCC
Confidence 7776 67776431 113567777777773 45566666643
No 108
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=89.02 E-value=0.78 Score=48.40 Aligned_cols=101 Identities=12% Similarity=0.188 Sum_probs=64.4
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhcccc-ccCCcCCcCCCCCHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAK-DPGDFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~-~~~~~~~~~~~~~L~e 402 (481)
.+|.|+|+|..|.++|..|.+. |. +++++|+.- +....++. .... .+.....++.|
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~dr~~----------~~~~~l~~~~~~~-~gi~~~~s~~e 67 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH-----GF-------TVCAYNRTQ----------SKVDHFLANEAKG-KSIIGATSIED 67 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS----------HHHHHHHHTTTTT-SSEECCSSHHH
T ss_pred CCEEEEeeHHHHHHHHHHHHHC-----CC-------EEEEEeCCH----------HHHHHHHcccccC-CCeEEeCCHHH
Confidence 4899999999999999988753 53 577777631 11111221 1000 01112457999
Q ss_pred Hhccc-CCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 403 VVRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 403 ~V~~v-kptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
+++.. +||++| ++..++...+++++.+.....+..||.-+||-.+
T Consensus 68 ~v~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~~ 113 (497)
T 2p4q_A 68 FISKLKRPRKVM-LLVKAGAPVDALINQIVPLLEKGDIIIDGGNSHF 113 (497)
T ss_dssp HHHTSCSSCEEE-ECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCCH
T ss_pred HHhcCCCCCEEE-EEcCChHHHHHHHHHHHHhCCCCCEEEECCCCCh
Confidence 88763 488877 4433456788899888653445678888998665
No 109
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=88.81 E-value=0.36 Score=50.77 Aligned_cols=106 Identities=17% Similarity=0.226 Sum_probs=64.6
Q ss_pred ceEEEeCccHH--HHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCC-CCCChhhhccccccCCcCCcCCCCCH
Q 011618 324 QKIVVVGAGSA--GLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASL 400 (481)
Q Consensus 324 ~riv~~GAGsA--g~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L 400 (481)
.||.|+||||. |.|++..|+.. ..+ + ..|+|+|.+- ++ +.+......+.+ .++. .....++
T Consensus 6 ~KIaVIGaGs~g~g~~la~~l~~~----~~~----~-geV~L~Di~~----e~le~~~~~~~~l~~--~~~~-I~~TtD~ 69 (450)
T 3fef_A 6 IKIAYIGGGSQGWARSLMSDLSID----ERM----S-GTVALYDLDF----EAAQKNEVIGNHSGN--GRWR-YEAVSTL 69 (450)
T ss_dssp EEEEEETTTCSSHHHHHHHHHHHC----SSC----C-EEEEEECSSH----HHHHHHHHHHTTSTT--SCEE-EEEESSH
T ss_pred CEEEEECCChhHhHHHHHHHHHhc----ccc----C-CeEEEEeCCH----HHHHHHHHHHHHHhc--cCCe-EEEECCH
Confidence 79999999995 68998887742 222 1 3799999752 11 000000011111 1110 1124679
Q ss_pred HHHhcccCCcEEEeecCCC---------------CC---------------------CCHHHHHHhhhcCCCCCEEEecC
Q 011618 401 LEVVRKVKPHVLLGLSGVG---------------GV---------------------FNEEVLKAMRESDSVKPAIFAMS 444 (481)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~---------------g~---------------------Ft~evv~~Ma~~~~erPIIFaLS 444 (481)
.||+++ +|.+|=.-.++ |. .-.++++.|.+ ++...+++-.|
T Consensus 70 ~eAl~d--ADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~-~~p~a~~i~~t 146 (450)
T 3fef_A 70 KKALSA--ADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRD-YAPESWVINYT 146 (450)
T ss_dssp HHHHTT--CSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHH-HCTTSEEEECC
T ss_pred HHHhcC--CCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHH-HCCCeEEEEec
Confidence 999999 89888333211 22 13467777754 88999999999
Q ss_pred CCCC
Q 011618 445 NPTM 448 (481)
Q Consensus 445 NPt~ 448 (481)
||..
T Consensus 147 NPvd 150 (450)
T 3fef_A 147 NPMS 150 (450)
T ss_dssp SSHH
T ss_pred CchH
Confidence 9987
No 110
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=88.74 E-value=1.7 Score=43.62 Aligned_cols=91 Identities=16% Similarity=0.268 Sum_probs=59.6
Q ss_pred CCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCC
Q 011618 320 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGAS 399 (481)
Q Consensus 320 dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~ 399 (481)
+|.+.+|.|+|+|..|..+|+.+... |+ +++.+|+..- . .. .+ ....+
T Consensus 161 ~l~g~~vgIIG~G~iG~~vA~~l~~~-----G~-------~V~~~dr~~~----~--~~----g~----------~~~~~ 208 (333)
T 3ba1_A 161 KFSGKRVGIIGLGRIGLAVAERAEAF-----DC-------PISYFSRSKK----P--NT----NY----------TYYGS 208 (333)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTT-----TC-------CEEEECSSCC----T--TC----CS----------EEESC
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEECCCch----h--cc----Cc----------eecCC
Confidence 55669999999999999999987643 43 5888887421 1 10 00 01246
Q ss_pred HHHHhcccCCcEEEeecC----CCCCCCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 400 LLEVVRKVKPHVLLGLSG----VGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 400 L~e~V~~vkptvLIG~S~----~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
|.|+++. .|+++=.-. ..++++++.++.|. +..+|.-.|.-..
T Consensus 209 l~ell~~--aDvVil~vP~~~~t~~li~~~~l~~mk----~gailIn~srG~~ 255 (333)
T 3ba1_A 209 VVELASN--SDILVVACPLTPETTHIINREVIDALG----PKGVLINIGRGPH 255 (333)
T ss_dssp HHHHHHT--CSEEEECSCCCGGGTTCBCHHHHHHHC----TTCEEEECSCGGG
T ss_pred HHHHHhc--CCEEEEecCCChHHHHHhhHHHHhcCC----CCCEEEECCCCch
Confidence 8888876 787774321 23678888888883 4567776665544
No 111
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=88.65 E-value=0.46 Score=49.25 Aligned_cols=118 Identities=19% Similarity=0.233 Sum_probs=73.4
Q ss_pred CceEEEeCccHHHHHHHHHHHHHHHH-HcCCChhhhcCeEEEEeccceeecCCCC-CChhhhccccccCCcCCcCCCCCH
Q 011618 323 DQKIVVVGAGSAGLGVLKMAVQAAAR-MAGNNDAFARNKFFLLDKDGLITKERKN-LDPAAAPFAKDPGDFMGLREGASL 400 (481)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~-~~Gls~eeA~~~i~lvD~~GLi~~~r~~-l~~~k~~fA~~~~~~~~~~~~~~L 400 (481)
..||.|+|||+. ++..++..+.. ..++. -..|+|+|.+- ++-. .......+++..... ....++
T Consensus 2 ~~KI~IIGaG~v---~~~~l~~~l~~~~~~l~----~~el~L~Di~~----~~~~~~~~~~~~~~~~~~~v---~~t~d~ 67 (417)
T 1up7_A 2 HMRIAVIGGGSS---YTPELVKGLLDISEDVR----IDEVIFYDIDE----EKQKIVVDFVKRLVKDRFKV---LISDTF 67 (417)
T ss_dssp CCEEEEETTTCT---THHHHHHHHHHHTTTSC----CCEEEEECSCH----HHHHHHHHHHHHHHTTSSEE---EECSSH
T ss_pred CCEEEEECCCHH---HHHHHHHHHHhcccCCC----cCEEEEEeCCH----HHHHHHHHHHHHHhhCCeEE---EEeCCH
Confidence 369999999994 66666555552 14542 25799999743 1100 111111111111111 123578
Q ss_pred HHHhcccCCcEEEeecCCCC---------------CC-------------------CHHHHHHhhhcCCCCCEEEecCCC
Q 011618 401 LEVVRKVKPHVLLGLSGVGG---------------VF-------------------NEEVLKAMRESDSVKPAIFAMSNP 446 (481)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~g---------------~F-------------------t~evv~~Ma~~~~erPIIFaLSNP 446 (481)
.+++++ +|++|=..++++ ++ =.++++.|.+ ++ ..+|+-.|||
T Consensus 68 ~~al~~--AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~-~~-~A~lin~TNP 143 (417)
T 1up7_A 68 EGAVVD--AKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRK-TS-NATIVNFTNP 143 (417)
T ss_dssp HHHHTT--CSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHH-TT-CCEEEECSSS
T ss_pred HHHhCC--CCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHH-HC-CEEEEEeCCh
Confidence 899999 999997776653 22 3588899964 99 9999999999
Q ss_pred CCCCCCCCCHHHHHhcc
Q 011618 447 TMNGLFSCCVTTFFFYL 463 (481)
Q Consensus 447 t~~aE~~~t~eda~~wt 463 (481)
.. +..+-+++.+
T Consensus 144 vd-----i~t~a~~k~~ 155 (417)
T 1up7_A 144 SG-----HITEFVRNYL 155 (417)
T ss_dssp HH-----HHHHHHHHTT
T ss_pred HH-----HHHHHHHHhC
Confidence 87 4455566666
No 112
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=88.64 E-value=0.17 Score=48.47 Aligned_cols=104 Identities=20% Similarity=0.349 Sum_probs=58.7
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeec--CCC------CCChhhhcccc----ccC-C
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITK--ERK------NLDPAAAPFAK----DPG-D 390 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~--~r~------~l~~~k~~fA~----~~~-~ 390 (481)
.||+|+|+|..|..+|+.|+.+ |+ ++|.++|.+=+=.. .|. ++-..|..-+. ..+ .
T Consensus 29 ~~VlvvG~GglG~~va~~La~~-----Gv------g~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~ 97 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGA-----GV------GTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPD 97 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC------SEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTT
T ss_pred CcEEEEccCHHHHHHHHHHHHc-----CC------CeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCC
Confidence 8999999999999999988865 44 68999998732111 111 11111211110 000 0
Q ss_pred --cCCcC---CCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEec
Q 011618 391 --FMGLR---EGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAM 443 (481)
Q Consensus 391 --~~~~~---~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaL 443 (481)
+.... ...++.+.++. .|++|.++. ..-++..+...+. ....|+|.+-
T Consensus 98 ~~v~~~~~~~~~~~~~~~~~~--~DvVi~~~d--~~~~r~~l~~~~~-~~~~p~i~~~ 150 (251)
T 1zud_1 98 IQLTALQQRLTGEALKDAVAR--ADVVLDCTD--NMATRQEINAACV-ALNTPLITAS 150 (251)
T ss_dssp SEEEEECSCCCHHHHHHHHHH--CSEEEECCS--SHHHHHHHHHHHH-HTTCCEEEEE
T ss_pred CEEEEEeccCCHHHHHHHHhc--CCEEEECCC--CHHHHHHHHHHHH-HhCCCEEEEe
Confidence 00000 11236667776 899997654 2234556666554 3568888754
No 113
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=88.58 E-value=0.12 Score=54.45 Aligned_cols=121 Identities=20% Similarity=0.187 Sum_probs=71.1
Q ss_pred ceEEEeCccHH-HHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccc-cccCCcCCcCCCCCHH
Q 011618 324 QKIVVVGAGSA-GLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFA-KDPGDFMGLREGASLL 401 (481)
Q Consensus 324 ~riv~~GAGsA-g~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA-~~~~~~~~~~~~~~L~ 401 (481)
.||.|+|||+. +.++|..|+.. ..++. -..++|+|.+-=... .+.+....+. .-..+.. .....++.
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~---~~~l~----~~eV~L~Di~~e~~~---~~~~~~~~~l~~~~~~~~-I~~t~D~~ 97 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDH---LEEFP----IRKLKLYDNDKERQD---RIAGACDVFIREKAPDIE-FAATTDPE 97 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHT---TTTSC----EEEEEEECSCHHHHH---HHHHHHHHHHHHHCTTSE-EEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHhC---CCCCC----CCEEEEEeCCHHHHH---HHHHHHHHHhccCCCCCE-EEEECCHH
Confidence 69999999996 44456555431 12442 157999998531111 1111111221 1000100 11235799
Q ss_pred HHhcccCCcEEEeecCCCCC----------------------------------CCHHHHHHhhhcCCCCCEEEecCCCC
Q 011618 402 EVVRKVKPHVLLGLSGVGGV----------------------------------FNEEVLKAMRESDSVKPAIFAMSNPT 447 (481)
Q Consensus 402 e~V~~vkptvLIG~S~~~g~----------------------------------Ft~evv~~Ma~~~~erPIIFaLSNPt 447 (481)
+++++ +|++|=+.+.++. .=+++++.|.+ ++...+|+-.|||.
T Consensus 98 eal~~--AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~-~~P~A~ii~~TNPv 174 (472)
T 1u8x_X 98 EAFTD--VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEK-YSPDAWMLNYSNPA 174 (472)
T ss_dssp HHHSS--CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECCSCH
T ss_pred HHHcC--CCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHH-HCCCeEEEEeCCcH
Confidence 99998 8999865544321 13588888864 99999999999999
Q ss_pred CCCCCCCCHHHHHhcc
Q 011618 448 MNGLFSCCVTTFFFYL 463 (481)
Q Consensus 448 ~~aE~~~t~eda~~wt 463 (481)
. +..+-+++.+
T Consensus 175 d-----i~T~~~~k~~ 185 (472)
T 1u8x_X 175 A-----IVAEATRRLR 185 (472)
T ss_dssp H-----HHHHHHHHHS
T ss_pred H-----HHHHHHHHhC
Confidence 7 4445555654
No 114
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=88.57 E-value=0.18 Score=54.87 Aligned_cols=36 Identities=22% Similarity=0.420 Sum_probs=30.9
Q ss_pred CCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
|++.||+|+|||..|..||+.|+.+++ ++|.++|.+
T Consensus 325 L~~~kVLIVGaGGLGs~va~~La~aGV-----------G~ItLvD~D 360 (598)
T 3vh1_A 325 IKNTKVLLLGAGTLGCYVSRALIAWGV-----------RKITFVDNG 360 (598)
T ss_dssp HHTCEEEEECCSHHHHHHHHHHHTTTC-----------CEEEEECCS
T ss_pred HhCCeEEEECCCHHHHHHHHHHHHcCC-----------CEEEEECCC
Confidence 344999999999999999999887644 689999976
No 115
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=88.56 E-value=0.72 Score=43.11 Aligned_cols=101 Identities=15% Similarity=0.104 Sum_probs=57.4
Q ss_pred eEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHHh
Q 011618 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVV 404 (481)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~V 404 (481)
||.|+|+|..|..+|..|..+ | .+++++|++- . .+...+..... ...+.......+ .+++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~----~--~~~~l~~~~~~-~~~~~~~~~~~~-~~~~ 61 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-----G-------HEVQGWLRVP----Q--PYCSVNLVETD-GSIFNESLTAND-PDFL 61 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSC----C--SEEEEEEECTT-SCEEEEEEEESC-HHHH
T ss_pred eEEEECcCHHHHHHHHHHHhC-----C-------CCEEEEEcCc----c--ceeeEEEEcCC-CceeeeeeeecC-cccc
Confidence 799999999999999988653 4 2688888742 1 11111000000 000000001122 4667
Q ss_pred cccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCCCCC
Q 011618 405 RKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMN 449 (481)
Q Consensus 405 ~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~ 449 (481)
+. +|++| ++..+. -.+++++.++....+..+|..++|....
T Consensus 62 ~~--~d~vi-~~v~~~-~~~~v~~~l~~~l~~~~~vv~~~~g~~~ 102 (291)
T 1ks9_A 62 AT--SDLLL-VTLKAW-QVSDAVKSLASTLPVTTPILLIHNGMGT 102 (291)
T ss_dssp HT--CSEEE-ECSCGG-GHHHHHHHHHTTSCTTSCEEEECSSSCT
T ss_pred CC--CCEEE-EEecHH-hHHHHHHHHHhhCCCCCEEEEecCCCCc
Confidence 65 88887 333233 3689999886534456677778997643
No 116
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=88.46 E-value=0.47 Score=47.68 Aligned_cols=115 Identities=17% Similarity=0.212 Sum_probs=69.5
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCC-CCCChhhhccccccCCcCCcCCCCCHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (481)
.||.|+|||..|..+|..|+.. |+- ..+.++|..-=..++- .+|.+.. +|..+.. ...+..+
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~-----~~~-----~el~l~D~~~~k~~g~a~DL~~~~-~~~~~~~------i~~~~~~ 72 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQ-----GIA-----QEIGIVDIFKDKTKGDAIDLEDAL-PFTSPKK------IYSAEYS 72 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSCHHHHHHHHHHHHTTG-GGSCCCE------EEECCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC-----CeEEEEeCChHHHHHHHhhHhhhh-hhcCCcE------EEECcHH
Confidence 6999999999999999888754 432 4799999831101100 0222211 2322110 1122356
Q ss_pred HhcccCCcEEEeecCCC---C-----CC------CHHHHHHhhhcCCCCCEEEecCCCCCCCCCCCCHHHHHhcc
Q 011618 403 VVRKVKPHVLLGLSGVG---G-----VF------NEEVLKAMRESDSVKPAIFAMSNPTMNGLFSCCVTTFFFYL 463 (481)
Q Consensus 403 ~V~~vkptvLIG~S~~~---g-----~F------t~evv~~Ma~~~~erPIIFaLSNPt~~aE~~~t~eda~~wt 463 (481)
++++ +|++|=+.+.| | +| -+++++.|.+ ++...+|+-.|||.. +..+-+++.+
T Consensus 73 a~~~--aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~-~~p~a~ilvvtNPvd-----i~t~~~~k~~ 139 (326)
T 3vku_A 73 DAKD--ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVD-SGFNGIFLVAANPVD-----ILTYATWKLS 139 (326)
T ss_dssp GGTT--CSEEEECCCCC----------------CHHHHHHHHHT-TTCCSEEEECSSSHH-----HHHHHHHHHH
T ss_pred HhcC--CCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHh-cCCceEEEEccCchH-----HHHHHHHHhc
Confidence 7777 89887444433 2 23 3577788864 899999999999987 4455555554
No 117
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=88.30 E-value=1.2 Score=43.43 Aligned_cols=94 Identities=19% Similarity=0.121 Sum_probs=56.6
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
.||.|+|+|..|.++|..|..+ |. ++++++|++- ++.+...+.... .....++.|+
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~-----G~------~~V~~~dr~~---------~~~~~~~~~~~g----~~~~~~~~e~ 80 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQA-----GA------IDMAAYDAAS---------AESWRPRAEELG----VSCKASVAEV 80 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----SC------CEEEEECSSC---------HHHHHHHHHHTT----CEECSCHHHH
T ss_pred CEEEEECccHHHHHHHHHHHHC-----CC------CeEEEEcCCC---------CHHHHHHHHHCC----CEEeCCHHHH
Confidence 6899999999999999998764 42 3688888731 011111111100 0123568888
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCC
Q 011618 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (481)
Q Consensus 404 V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSN 445 (481)
++. +|++| ++. |.....++++.+.+...+..||.-+|+
T Consensus 81 ~~~--aDvVi-~~v-p~~~~~~~~~~l~~~l~~~~ivvd~st 118 (312)
T 3qsg_A 81 AGE--CDVIF-SLV-TAQAALEVAQQAGPHLCEGALYADFTS 118 (312)
T ss_dssp HHH--CSEEE-ECS-CTTTHHHHHHHHGGGCCTTCEEEECCC
T ss_pred Hhc--CCEEE-Eec-CchhHHHHHHhhHhhcCCCCEEEEcCC
Confidence 877 77776 332 333444566776543445667776664
No 118
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=88.17 E-value=0.95 Score=47.24 Aligned_cols=101 Identities=17% Similarity=0.228 Sum_probs=62.4
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhcccc-ccCCcCCcCCCCCHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAK-DPGDFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~-~~~~~~~~~~~~~L~e 402 (481)
.||.|+|+|..|..+|..|... |. +++++|+.. +.+. .+.+ .... .+.....++.|
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~------~~~~----~l~~~~~~g-~gi~~~~~~~e 59 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRTV------SKVD----DFLANEAKG-TKVLGAHSLEE 59 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSST------HHHH----HHHHTTTTT-SSCEECSSHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHC-----CC-------eEEEEeCCH------HHHH----HHHhccccC-CCeEEeCCHHH
Confidence 5899999999999999888653 53 577787631 1111 1111 0000 01112457889
Q ss_pred Hhccc-CCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 403 VVRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 403 ~V~~v-kptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
+++.+ ++|++| ++..++...+++++.+.....+..||.-+||-.+
T Consensus 60 ~v~~l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~~ 105 (482)
T 2pgd_A 60 MVSKLKKPRRII-LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSEY 105 (482)
T ss_dssp HHHHBCSSCEEE-ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCCH
T ss_pred HHhhccCCCEEE-EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCCH
Confidence 88632 489887 4443455678888877543445568888998765
No 119
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=88.09 E-value=0.27 Score=49.57 Aligned_cols=33 Identities=27% Similarity=0.529 Sum_probs=29.8
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.||+|+|+|..|..+|..|+.+++ .+|.++|.+
T Consensus 119 ~~VlvvG~GglGs~va~~La~aGv-----------g~i~lvD~D 151 (353)
T 3h5n_A 119 AKVVILGCGGIGNHVSVILATSGI-----------GEIILIDND 151 (353)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC-----------SEEEEEECC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC-----------CeEEEECCC
Confidence 899999999999999999987754 689999986
No 120
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=87.99 E-value=0.38 Score=45.92 Aligned_cols=94 Identities=22% Similarity=0.176 Sum_probs=55.6
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
.||.|+|+|..|..+|..+... | -+++++|++ . +... .+++.. .....++.|+
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~----~--~~~~----~~~~~g-----~~~~~~~~~~ 54 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-----G-------CSVTIWNRS----P--EKAE----ELAALG-----AERAATPCEV 54 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS----G--GGGH----HHHHTT-----CEECSSHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CeEEEEcCC----H--HHHH----HHHHCC-----CeecCCHHHH
Confidence 5899999999999999988753 4 267777763 1 1111 121111 0123578898
Q ss_pred hcccCCcEEEeecCCC-CCCCHHHH---HHhhhcCCCCCEEEecCCCCC
Q 011618 404 VRKVKPHVLLGLSGVG-GVFNEEVL---KAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 404 V~~vkptvLIG~S~~~-g~Ft~evv---~~Ma~~~~erPIIFaLSNPt~ 448 (481)
++. +|++| ++. | ..-.++++ +.+.+...+..+|.-+|+-.+
T Consensus 55 ~~~--aDvvi-~~v-p~~~~~~~v~~~~~~l~~~l~~~~~vi~~st~~~ 99 (287)
T 3pef_A 55 VES--CPVTF-AML-ADPAAAEEVCFGKHGVLEGIGEGRGYVDMSTVDP 99 (287)
T ss_dssp HHH--CSEEE-ECC-SSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCH
T ss_pred Hhc--CCEEE-EEc-CCHHHHHHHHcCcchHhhcCCCCCEEEeCCCCCH
Confidence 887 78877 332 3 23344555 333222345667777776444
No 121
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=87.94 E-value=0.23 Score=49.06 Aligned_cols=116 Identities=21% Similarity=0.297 Sum_probs=69.9
Q ss_pred eEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCC-CCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
||.|+|||+.|.++|..|... |+- ..+.++|.+-=..++. .++.+....|-.+. .. ....+ .++
T Consensus 2 kI~ViGaG~vG~~la~~l~~~-----~~~-----~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~-~i---~~t~d-~~a 66 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN-----LDV-----DEIALVDIAEDLAVGEAMDLAHAAAGIDKYP-KI---VGGAD-YSL 66 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SCC-----SEEEEECSSHHHHHHHHHHHHHHHHTTTCCC-EE---EEESC-GGG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CCC-----CeEEEEECChHHHHHHHHHHHhhhhhcCCCC-EE---EEeCC-HHH
Confidence 799999999999999887653 431 4799999743111100 01222221121111 01 11235 788
Q ss_pred hcccCCcEEEeecCCC---CC-----C--C----HHHHHHhhhcCCCCCEEEecCCCCCCCCCCCCHHHHHhcc
Q 011618 404 VRKVKPHVLLGLSGVG---GV-----F--N----EEVLKAMRESDSVKPAIFAMSNPTMNGLFSCCVTTFFFYL 463 (481)
Q Consensus 404 V~~vkptvLIG~S~~~---g~-----F--t----~evv~~Ma~~~~erPIIFaLSNPt~~aE~~~t~eda~~wt 463 (481)
+++ +|++|=+.+.| |- | + +++++.|.+ ++...+|+-.|||.. ....-+++.+
T Consensus 67 ~~~--aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~-~~p~a~iivvsNPvd-----~~t~~~~k~~ 132 (294)
T 1oju_A 67 LKG--SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVE-NAPESKILVVTNPMD-----VMTYIMWKES 132 (294)
T ss_dssp GTT--CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHT-TSTTCEEEECSSSHH-----HHHHHHHHHS
T ss_pred hCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHh-hCCCeEEEEeCCcch-----HHHHHHHHhc
Confidence 888 89887544433 42 1 2 456667754 899999999999987 4455666554
No 122
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=87.93 E-value=0.32 Score=45.95 Aligned_cols=32 Identities=38% Similarity=0.472 Sum_probs=25.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.||.|+|+|..|..+|..|... | .+++++|++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG-----G-------NDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhC-----C-------CcEEEEECC
Confidence 4899999999999999888653 4 268888874
No 123
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=87.89 E-value=1.4 Score=44.43 Aligned_cols=102 Identities=21% Similarity=0.173 Sum_probs=61.6
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceee----cCCC---CCChhhhccccccCCcCCcCC
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLIT----KERK---NLDPAAAPFAKDPGDFMGLRE 396 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~----~~r~---~l~~~k~~fA~~~~~~~~~~~ 396 (481)
.||.|+|+|+-|.++|..|... | .+++++|++--.. ..+. .++..+ + + ....-
T Consensus 30 mkI~VIGaG~mG~alA~~La~~-----G-------~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~--l--~----~~i~~ 89 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARK-----G-------QKVRLWSYESDHVDEMQAEGVNNRYLPNYP--F--P----ETLKA 89 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTT-----T-------CCEEEECSCHHHHHHHHHHSSBTTTBTTCC--C--C----TTEEE
T ss_pred CeEEEECccHHHHHHHHHHHHC-----C-------CeEEEEeCCHHHHHHHHHcCCCcccCCCCc--c--C----CCeEE
Confidence 6899999999999999988753 4 2577777741100 0000 011100 0 0 00011
Q ss_pred CCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCCCCC
Q 011618 397 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMN 449 (481)
Q Consensus 397 ~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~ 449 (481)
..++.|+++. +|++| ++ +|--+.+++++.++....+..+|..++|-...
T Consensus 90 t~d~~ea~~~--aDvVi-la-Vp~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~ 138 (356)
T 3k96_A 90 YCDLKASLEG--VTDIL-IV-VPSFAFHEVITRMKPLIDAKTRIAWGTKGLAK 138 (356)
T ss_dssp ESCHHHHHTT--CCEEE-EC-CCHHHHHHHHHHHGGGCCTTCEEEECCCSCBT
T ss_pred ECCHHHHHhc--CCEEE-EC-CCHHHHHHHHHHHHHhcCCCCEEEEEeCCCCc
Confidence 3578888877 78776 33 24447788888886544556678888886653
No 124
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=87.86 E-value=1.2 Score=47.20 Aligned_cols=102 Identities=16% Similarity=0.187 Sum_probs=65.4
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
.+|.|+|+|..|.++|..|... |. +++++|++- +.-..++.....-.......++.|+
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~-----G~-------~V~v~dr~~----------~~~~~l~~~g~~g~~i~~~~s~~e~ 62 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRTV----------SKVDDFLANEAKGTKVVGAQSLKEM 62 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSST----------HHHHHHHHTTTTTSSCEECSSHHHH
T ss_pred CEEEEEChhHHHHHHHHHHHHC-----CC-------EEEEEeCCH----------HHHHHHHhcccCCCceeccCCHHHH
Confidence 6899999999999999888753 53 577777631 1111222110000000113679999
Q ss_pred hccc-CCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 404 VRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 404 V~~v-kptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
++.+ +||++| ++-.++.-++++++.+.....+..||.-.||-.+
T Consensus 63 v~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~~ 107 (484)
T 4gwg_A 63 VSKLKKPRRII-LLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSEY 107 (484)
T ss_dssp HHTBCSSCEEE-ECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCCH
T ss_pred HhhccCCCEEE-EecCChHHHHHHHHHHHHhcCCCCEEEEcCCCCc
Confidence 8753 488777 4433455778888888765567789999998765
No 125
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=87.81 E-value=3.5 Score=41.61 Aligned_cols=125 Identities=13% Similarity=0.192 Sum_probs=77.7
Q ss_pred CCccccCc---chhHHHHHHHHHHHHHHh---------CC---------CCCCCCCceEEEeCccHHHHHHHHHHHHHHH
Q 011618 289 FCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL---------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAA 347 (481)
Q Consensus 289 ~~~FNDDi---QGTaaV~LAgll~Alr~~---------g~---------~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~ 347 (481)
|++.|--- +.+|=-+++-+++..|-. |. .-.+|.+.+|.|+|.|..|..+|+.+...
T Consensus 118 I~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~-- 195 (345)
T 4g2n_A 118 IKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARGF-- 195 (345)
T ss_dssp CEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHTT--
T ss_pred EEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHHC--
Confidence 55555432 345556788888877742 10 01356669999999999999999998654
Q ss_pred HHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHHhcccCCcEEEeecC----CCCCCC
Q 011618 348 RMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG----VGGVFN 423 (481)
Q Consensus 348 ~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~----~~g~Ft 423 (481)
|+ +++.+|+... +... +... ....+|.|+++. .|+++=.-- .-+.|+
T Consensus 196 ---G~-------~V~~~dr~~~--------~~~~---~~g~------~~~~~l~ell~~--sDvV~l~~Plt~~T~~li~ 246 (345)
T 4g2n_A 196 ---GL-------AIHYHNRTRL--------SHAL---EEGA------IYHDTLDSLLGA--SDIFLIAAPGRPELKGFLD 246 (345)
T ss_dssp ---TC-------EEEEECSSCC--------CHHH---HTTC------EECSSHHHHHHT--CSEEEECSCCCGGGTTCBC
T ss_pred ---CC-------EEEEECCCCc--------chhh---hcCC------eEeCCHHHHHhh--CCEEEEecCCCHHHHHHhC
Confidence 43 6888887521 1111 0000 012368888877 788774321 127788
Q ss_pred HHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 424 EEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 424 ~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
++.+..|. +..|+.=.|.-..
T Consensus 247 ~~~l~~mk----~gailIN~aRG~~ 267 (345)
T 4g2n_A 247 HDRIAKIP----EGAVVINISRGDL 267 (345)
T ss_dssp HHHHHHSC----TTEEEEECSCGGG
T ss_pred HHHHhhCC----CCcEEEECCCCch
Confidence 88888883 5667776665444
No 126
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=87.74 E-value=0.18 Score=49.88 Aligned_cols=116 Identities=14% Similarity=0.231 Sum_probs=67.0
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCC-CCCChhhhccccccCCcCCcCCCCCHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (481)
.||.|+|||..|.++|..+... |+- ..|+++|.+--..+.. .++.+. .++... +. .-..+..+
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~-----~~~-----~ev~l~Di~~~~~~~~~~dl~~~-~~~~~~--~~---~i~~~~~~ 70 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ-----GIA-----DEIVLIDANESKAIGDAMDFNHG-KVFAPK--PV---DIWHGDYD 70 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSSHHHHHHHHHHHHHH-TTSSSS--CC---EEEECCGG
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CCC-----CEEEEEeCCcchHHHHHhhHHHH-hhhcCC--Ce---EEEcCcHH
Confidence 5999999999999999766532 432 4799999852111100 011111 111110 00 00123456
Q ss_pred HhcccCCcEEEeecCCC---C-----------CCCHHHHHHhhhcCCCCCEEEecCCCCCCCCCCCCHHHHHhcc
Q 011618 403 VVRKVKPHVLLGLSGVG---G-----------VFNEEVLKAMRESDSVKPAIFAMSNPTMNGLFSCCVTTFFFYL 463 (481)
Q Consensus 403 ~V~~vkptvLIG~S~~~---g-----------~Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~~~t~eda~~wt 463 (481)
++++ +|++|=+.+.+ | ...+++++.|.+ ++...++|-.|||.. ...+-+++.+
T Consensus 71 al~~--aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~~iv~tNPv~-----~~~~~~~~~s 137 (316)
T 1ldn_A 71 DCRD--ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMA-SGFQGLFLVATNPVD-----ILTYATWKFS 137 (316)
T ss_dssp GTTT--CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHH-HTCCSEEEECSSSHH-----HHHHHHHHHH
T ss_pred HhCC--CCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHH-HCCCCEEEEeCCchH-----HHHHHHHHHh
Confidence 7877 89988554433 2 234567777754 677778888899987 4444555543
No 127
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=87.69 E-value=0.45 Score=46.91 Aligned_cols=104 Identities=18% Similarity=0.292 Sum_probs=59.9
Q ss_pred eEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecC-CCCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
||.|+|||+.|.++|..+... |.. ..++++|.+-=-... ..++.+. .++.... .. ...+ .++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-----g~~-----~~V~l~D~~~~~~~~~~~~l~~~-~~~~~~~-~i----~~~d-~~~ 64 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-----GFA-----REMVLIDVDKKRAEGDALDLIHG-TPFTRRA-NI----YAGD-YAD 64 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSSHHHHHHHHHHHHHH-GGGSCCC-EE----EECC-GGG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CCC-----CeEEEEeCChHHHHHHHHHHHhh-hhhcCCc-EE----EeCC-HHH
Confidence 799999999999999887653 431 479999985100000 0001100 0111110 00 0123 456
Q ss_pred hcccCCcEEEeecCCCCC--------------CCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 404 VRKVKPHVLLGLSGVGGV--------------FNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 404 V~~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
++. +|++|=+-..+.. .-+++++.|.+ ++..-+|+-.|||..
T Consensus 65 ~~~--aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~~~~~ii~~tNp~~ 120 (319)
T 1a5z_A 65 LKG--SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSK-YAPDSIVIVVTNPVD 120 (319)
T ss_dssp GTT--CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECSSSHH
T ss_pred hCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh-hCCCeEEEEeCCcHH
Confidence 766 8988844443332 12688888864 567778777999987
No 128
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=87.63 E-value=0.9 Score=46.92 Aligned_cols=24 Identities=25% Similarity=0.479 Sum_probs=21.6
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAA 347 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~ 347 (481)
.||.|+|||+=|+++|..|.+...
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~ 58 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCK 58 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHcCC
Confidence 599999999999999999988643
No 129
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=87.48 E-value=0.76 Score=44.54 Aligned_cols=100 Identities=14% Similarity=0.129 Sum_probs=56.1
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccc---ccc--C-CcCCcCCC
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFA---KDP--G-DFMGLREG 397 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA---~~~--~-~~~~~~~~ 397 (481)
.||.|+|+|..|..+|..|... | .+++++|++.= .+...++... ... . ........
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~-----g-------~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK-----G-------QSVLAWDIDAQ------RIKEIQDRGAIIAEGPGLAGTAHPDLLT 66 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCHH------HHHHHHHHTSEEEESSSCCEEECCSEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhC-----C-------CEEEEEeCCHH------HHHHHHhcCCeEEeccccccccccceec
Confidence 6899999999999999887643 4 25888887410 0111111000 000 0 00000013
Q ss_pred CCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCC
Q 011618 398 ASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (481)
Q Consensus 398 ~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSN 445 (481)
.++.++++. +|++|=+. +.-..+++++.++....+..+|+.+.|
T Consensus 67 ~~~~~~~~~--~D~vi~~v--~~~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 67 SDIGLAVKD--ADVILIVV--PAIHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp SCHHHHHTT--CSEEEECS--CGGGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred CCHHHHHhc--CCEEEEeC--CchHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 468888875 88877332 333458888888653445566666644
No 130
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=87.23 E-value=1.2 Score=44.79 Aligned_cols=117 Identities=13% Similarity=0.156 Sum_probs=66.6
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccc
Q 011618 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFA 385 (481)
Q Consensus 306 gll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA 385 (481)
|.+++..... ... .++.|+|+|..|..++..+... .+. ++++++|+. .+ ......+.|.
T Consensus 117 s~laa~~la~--~~~---~~v~iIGaG~~a~~~a~al~~~----~~~------~~V~V~~r~----~~--~a~~la~~~~ 175 (350)
T 1x7d_A 117 SLMAAQALAR--PNA---RKMALIGNGAQSEFQALAFHKH----LGI------EEIVAYDTD----PL--ATAKLIANLK 175 (350)
T ss_dssp HHHHHHHHSC--TTC---CEEEEECCSTTHHHHHHHHHHH----SCC------CEEEEECSS----HH--HHHHHHHHHT
T ss_pred HHHHHHHhcc--ccC---CeEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HH--HHHHHHHHHH
Confidence 4455554432 345 7999999999999988776543 232 578888873 11 1122222221
Q ss_pred cccCCcCCcCCCCCHHHHhcccCCcEEEeecCCC---CCCCHHHHHHhhhcCCCCCEEEecCC--CCCCCCCCCCHH
Q 011618 386 KDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVG---GVFNEEVLKAMRESDSVKPAIFAMSN--PTMNGLFSCCVT 457 (481)
Q Consensus 386 ~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~---g~Ft~evv~~Ma~~~~erPIIFaLSN--Pt~~aE~~~t~e 457 (481)
... ... .....++.|+++. +|++|=++..+ -.|..+++ .+.-.|+.++. |. +.| +.++
T Consensus 176 ~~~-g~~-~~~~~~~~eav~~--aDiVi~aTps~~~~pvl~~~~l-------~~G~~V~~vgs~~p~-~~E--l~~~ 238 (350)
T 1x7d_A 176 EYS-GLT-IRRASSVAEAVKG--VDIITTVTADKAYATIITPDML-------EPGMHLNAVGGDCPG-KTE--LHAD 238 (350)
T ss_dssp TCT-TCE-EEECSSHHHHHTT--CSEEEECCCCSSEEEEECGGGC-------CTTCEEEECSCCBTT-BEE--ECHH
T ss_pred hcc-Cce-EEEeCCHHHHHhc--CCEEEEeccCCCCCceecHHHc-------CCCCEEEECCCCCCC-cee--eCHH
Confidence 100 000 0124679999987 89999766533 13443322 24458888885 55 567 6653
No 131
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=87.19 E-value=3.7 Score=40.48 Aligned_cols=92 Identities=16% Similarity=0.228 Sum_probs=57.5
Q ss_pred CCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCC
Q 011618 319 TDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGA 398 (481)
Q Consensus 319 ~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~ 398 (481)
.+|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+..- . ... ++ ...
T Consensus 118 ~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~dr~~~----~--~~~-----~~---------~~~ 165 (290)
T 3gvx_A 118 TLLYGKALGILGYGGIGRRVAHLAKAF-----GM-------RVIAYTRSSV----D--QNV-----DV---------ISE 165 (290)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSCC----C--TTC-----SE---------ECS
T ss_pred eeeecchheeeccCchhHHHHHHHHhh-----Cc-------EEEEEecccc----c--ccc-----cc---------ccC
Confidence 456669999999999999999998765 43 6888887521 1 100 11 123
Q ss_pred CHHHHhcccCCcEEEeecC----CCCCCCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 399 SLLEVVRKVKPHVLLGLSG----VGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 399 ~L~e~V~~vkptvLIG~S~----~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
+|.|+++. .|+++=.-- .-+.++++.++.|. +..+|.=.|.-..
T Consensus 166 ~l~ell~~--aDiV~l~~P~t~~t~~li~~~~l~~mk----~gailIN~aRG~~ 213 (290)
T 3gvx_A 166 SPADLFRQ--SDFVLIAIPLTDKTRGMVNSRLLANAR----KNLTIVNVARADV 213 (290)
T ss_dssp SHHHHHHH--CSEEEECCCCCTTTTTCBSHHHHTTCC----TTCEEEECSCGGG
T ss_pred ChHHHhhc--cCeEEEEeeccccchhhhhHHHHhhhh----cCceEEEeehhcc
Confidence 57777766 676663211 13566777777662 4566666664443
No 132
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=87.17 E-value=1.9 Score=43.72 Aligned_cols=151 Identities=19% Similarity=0.205 Sum_probs=85.0
Q ss_pred CCce-EEEeecCCCchHHHHHHHHh-hcCCccccCc---chhHHHHHHHHHHHHHHh---------C--------CCCCC
Q 011618 263 WPKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDI---QGTAGVALAGLLGTVRAQ---------G--------LSLTD 320 (481)
Q Consensus 263 ~P~~-~IqfEDf~~~naf~iL~ryr-~~~~~FNDDi---QGTaaV~LAgll~Alr~~---------g--------~~l~d 320 (481)
.|+. .|+.-=.+..|- . ++..+ ..|.+.|--- +.+|=-+++-+++..|-. | ..-.+
T Consensus 84 ~p~Lk~i~~~g~G~d~i-d-~~~a~~~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~ 161 (351)
T 3jtm_A 84 AKNLKLLLTAGIGSDHI-D-LQAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYD 161 (351)
T ss_dssp CSSCCEEEESSSCCTTB-C-HHHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCC
T ss_pred CCCCeEEEEeCeeeccc-C-HHHHHhcCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCccc
Confidence 5665 666544454442 1 12222 2365555322 234555788888877631 1 11234
Q ss_pred CCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCH
Q 011618 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (481)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L 400 (481)
|.+.+|.|+|.|..|..+|+.+... |+ +++.+|++.. +.. .+.... .....+|
T Consensus 162 l~gktvGIIG~G~IG~~vA~~l~~~-----G~-------~V~~~dr~~~--------~~~---~~~~~g----~~~~~~l 214 (351)
T 3jtm_A 162 LEGKTIGTVGAGRIGKLLLQRLKPF-----GC-------NLLYHDRLQM--------APE---LEKETG----AKFVEDL 214 (351)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGG-----CC-------EEEEECSSCC--------CHH---HHHHHC----CEECSCH
T ss_pred ccCCEEeEEEeCHHHHHHHHHHHHC-----CC-------EEEEeCCCcc--------CHH---HHHhCC----CeEcCCH
Confidence 5559999999999999999988654 43 5887876421 111 011000 0012368
Q ss_pred HHHhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 401 LEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 401 ~e~V~~vkptvLIG~S----~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
.|+++. .|+++=.- ..-+.|+++.++.|. +..+|.=.|.-..
T Consensus 215 ~ell~~--aDvV~l~~Plt~~t~~li~~~~l~~mk----~gailIN~aRG~~ 260 (351)
T 3jtm_A 215 NEMLPK--CDVIVINMPLTEKTRGMFNKELIGKLK----KGVLIVNNARGAI 260 (351)
T ss_dssp HHHGGG--CSEEEECSCCCTTTTTCBSHHHHHHSC----TTEEEEECSCGGG
T ss_pred HHHHhc--CCEEEECCCCCHHHHHhhcHHHHhcCC----CCCEEEECcCchh
Confidence 888877 77777321 123578888888883 4667766665444
No 133
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=87.12 E-value=0.97 Score=44.51 Aligned_cols=34 Identities=26% Similarity=0.411 Sum_probs=27.5
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.||.|+|+|..|..+|..+... |.. .+|+.+|++
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~-----G~~-----~~V~~~dr~ 67 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS-----GFK-----GKIYGYDIN 67 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT-----TCC-----SEEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-----CCC-----CEEEEEECC
Confidence 6999999999999999888753 542 378888874
No 134
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=87.10 E-value=0.39 Score=47.01 Aligned_cols=95 Identities=19% Similarity=0.226 Sum_probs=54.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
.||.|+|+|..|.++|..+... |. +++++|++- +....++... .....++.|+
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~~----------~~~~~l~~~g-----~~~~~~~~e~ 84 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEA-----GY-------ALQVWNRTP----------ARAASLAALG-----ATIHEQARAA 84 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHT-----TC-------EEEEECSCH----------HHHHHHHTTT-----CEEESSHHHH
T ss_pred CEEEEECccHHHHHHHHHHHhC-----CC-------eEEEEcCCH----------HHHHHHHHCC-----CEeeCCHHHH
Confidence 7999999999999999988754 43 577777631 1111222211 0123578888
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHH--HhhhcCCCCCEEEecCCCCC
Q 011618 404 VRKVKPHVLLGLSGVGGVFNEEVLK--AMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 404 V~~vkptvLIG~S~~~g~Ft~evv~--~Ma~~~~erPIIFaLSNPt~ 448 (481)
++. +|++|= +.....-.++++. .+.+...+..+|+-+|+-.+
T Consensus 85 ~~~--aDvVi~-~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st~~~ 128 (320)
T 4dll_A 85 ARD--ADIVVS-MLENGAVVQDVLFAQGVAAAMKPGSLFLDMASITP 128 (320)
T ss_dssp HTT--CSEEEE-CCSSHHHHHHHHTTTCHHHHCCTTCEEEECSCCCH
T ss_pred Hhc--CCEEEE-ECCCHHHHHHHHcchhHHhhCCCCCEEEecCCCCH
Confidence 877 787773 2211223344442 22222345667887876444
No 135
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=87.07 E-value=0.56 Score=45.67 Aligned_cols=48 Identities=17% Similarity=0.336 Sum_probs=34.9
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 305 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.|+..+++..|.. .. .+++|+|||.||.+++..|.+ .|. ++|+++++.
T Consensus 105 ~G~~~~l~~~~~~-~~---~~vlvlGaGgaarav~~~L~~-----~G~------~~i~v~nRt 152 (271)
T 1npy_A 105 IAIVKLIEKYHLN-KN---AKVIVHGSGGMAKAVVAAFKN-----SGF------EKLKIYARN 152 (271)
T ss_dssp HHHHHHHHHTTCC-TT---SCEEEECSSTTHHHHHHHHHH-----TTC------CCEEEECSC
T ss_pred HHHHHHHHHhCCC-CC---CEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC
Confidence 4566666665543 34 799999999999999887764 354 578888873
No 136
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=86.99 E-value=0.41 Score=47.50 Aligned_cols=104 Identities=15% Similarity=0.164 Sum_probs=64.1
Q ss_pred ceEEEeC-ccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccC--CcCCcCCCCCH
Q 011618 324 QKIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPG--DFMGLREGASL 400 (481)
Q Consensus 324 ~riv~~G-AGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~--~~~~~~~~~~L 400 (481)
.||+|.| +|..|..++..|.. .|+ -..++++|.+.- . .....+.+... .........++
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~-----~g~-----~~ev~l~Di~~~----~----~~~~dL~~~~~~~~v~~~~~t~d~ 70 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKM-----NPL-----VSVLHLYDVVNA----P----GVTADISHMDTGAVVRGFLGQQQL 70 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHH-----CTT-----EEEEEEEESSSH----H----HHHHHHHTSCSSCEEEEEESHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEeCCCc----H----hHHHHhhcccccceEEEEeCCCCH
Confidence 5999999 79999999877643 343 146999996421 0 00011111100 00000012358
Q ss_pred HHHhcccCCcEEEeecCCC---C-----------CCCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 401 LEVVRKVKPHVLLGLSGVG---G-----------VFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~---g-----------~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
.+++++ +|++|=+.+.+ | ..++++++.|.+ ++.+.+|+--|||..
T Consensus 71 ~~al~g--aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~-~~p~~~viv~SNPv~ 129 (326)
T 1smk_A 71 EAALTG--MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAK-CCPRAIVNLISNPVN 129 (326)
T ss_dssp HHHHTT--CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHH-HCTTSEEEECCSSHH
T ss_pred HHHcCC--CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHh-hCCCeEEEEECCchH
Confidence 899998 89998655544 3 246677888864 677888888999987
No 137
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=86.91 E-value=0.91 Score=47.25 Aligned_cols=101 Identities=15% Similarity=0.172 Sum_probs=62.8
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
.||.|+|+|..|..+|..|... |. +++++|+.. +.+....+.+. .. +.....++.|+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~-----G~-------~V~v~dr~~------~~~~~l~~~~~--~~---gi~~~~s~~e~ 62 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESR-----GY-------TVAIYNRTT------SKTEEVFKEHQ--DK---NLVFTKTLEEF 62 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSH------HHHHHHHHHTT--TS---CEEECSSHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhC-----CC-------EEEEEcCCH------HHHHHHHHhCc--CC---CeEEeCCHHHH
Confidence 6899999999999999888653 53 577777631 11111111110 00 11123578888
Q ss_pred hccc-CCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 404 VRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 404 V~~v-kptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
++.. +||++| ++..++...+++++.+.....+..||.-+||-.+
T Consensus 63 v~~l~~aDvVi-lavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~~ 107 (474)
T 2iz1_A 63 VGSLEKPRRIM-LMVQAGAATDATIKSLLPLLDIGDILIDGGNTHF 107 (474)
T ss_dssp HHTBCSSCEEE-ECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCCH
T ss_pred HhhccCCCEEE-EEccCchHHHHHHHHHHhhCCCCCEEEECCCCCH
Confidence 8753 478877 4444456677888877543445568888888764
No 138
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=86.79 E-value=0.35 Score=47.63 Aligned_cols=103 Identities=17% Similarity=0.145 Sum_probs=60.3
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccc----cCCcCCcCCCCC
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKD----PGDFMGLREGAS 399 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~----~~~~~~~~~~~~ 399 (481)
.||.|+|||..|.++|..+.. .|+ + .++++|.+- ++ +......+.+. ..... .....+
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~-----~g~----~--~v~L~Di~~----~~--~~g~~~dl~~~~~~~~~~~~-i~~t~d 64 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA-----KEL----G--DIVLLDIVE----GV--PQGKALDLYEASPIEGFDVR-VTGTNN 64 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC----S--EEEEECSSS----SH--HHHHHHHHHTTHHHHTCCCC-EEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHH-----CCC----C--eEEEEeCCc----cH--HHHHHHhHHHhHhhcCCCeE-EEECCC
Confidence 589999999999999987753 353 1 399999741 11 11111111110 00000 011245
Q ss_pred HHHHhcccCCcEEEeecCCCCC--------------CCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 400 LLEVVRKVKPHVLLGLSGVGGV--------------FNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 400 L~e~V~~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
+ +++++ +|++|=+.+.|.. .-+++.+.+.+ ++..-+|+--|||..
T Consensus 65 ~-~a~~~--aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~vi~~tNPv~ 123 (309)
T 1ur5_A 65 Y-ADTAN--SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAP-LSPNAVIIMVNNPLD 123 (309)
T ss_dssp G-GGGTT--CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGG-GCTTCEEEECCSSHH
T ss_pred H-HHHCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh-hCCCeEEEEcCCchH
Confidence 6 77887 8999855544421 22467777754 778888877899987
No 139
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=86.78 E-value=0.31 Score=48.24 Aligned_cols=114 Identities=18% Similarity=0.249 Sum_probs=66.6
Q ss_pred eEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecC-CCCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
||.|+|||+.|..+|-+|+. .++- ..++++|.+-=-.++ ..+|.+. .+|.++.. . ...+ .++
T Consensus 2 KI~IiGaG~vG~~~a~~l~~-----~~~~-----~el~L~Di~~~k~~g~a~dl~~~-~~~~~~~~-v----~~~~-~~a 64 (310)
T 2xxj_A 2 KVGIVGSGMVGSATAYALAL-----LGVA-----REVVLVDLDRKLAQAHAEDILHA-TPFAHPVW-V----WAGS-YGD 64 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEECSSHHHHHHHHHHHHTT-GGGSCCCE-E----EECC-GGG
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCCC-----CEEEEEeCChhHHHHHHHHHHHh-HhhcCCeE-E----EECC-HHH
Confidence 89999999999998887654 2332 479999985200000 0012111 12221110 0 1123 677
Q ss_pred hcccCCcEEEeecCCC---CC-----------CCHHHHHHhhhcCCCCCEEEecCCCCCCCCCCCCHHHHHhcc
Q 011618 404 VRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNGLFSCCVTTFFFYL 463 (481)
Q Consensus 404 V~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~~~t~eda~~wt 463 (481)
+++ +|++|=+.+.| |- .-+++++.|.+ ++...+|+-.|||.. ...+-+++.+
T Consensus 65 ~~~--aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~iiv~tNPv~-----~~t~~~~k~s 130 (310)
T 2xxj_A 65 LEG--ARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLE-AAPEAVLLVATNPVD-----VMTQVAYALS 130 (310)
T ss_dssp GTT--EEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECSSSHH-----HHHHHHHHHH
T ss_pred hCC--CCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHH-HCCCcEEEEecCchH-----HHHHHHHHHc
Confidence 887 89998444433 32 12456666644 788999999999987 4445555544
No 140
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=86.76 E-value=1.1 Score=41.79 Aligned_cols=34 Identities=18% Similarity=0.379 Sum_probs=26.4
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCC-ChhhhcCeEEEEec
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGN-NDAFARNKFFLLDK 366 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gl-s~eeA~~~i~lvD~ 366 (481)
.||.|+|+|..|..+|..|... |. .. .+++++|+
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~-----g~~~~----~~V~~~~r 37 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK-----NIVSS----NQIICSDL 37 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TSSCG----GGEEEECS
T ss_pred CeEEEECccHHHHHHHHHHHhC-----CCCCC----CeEEEEeC
Confidence 5899999999999999888753 42 21 36888887
No 141
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=86.65 E-value=1.9 Score=44.06 Aligned_cols=116 Identities=22% Similarity=0.252 Sum_probs=71.8
Q ss_pred hhHHHHHHHHHHHHHHh---------CC---------CCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcC
Q 011618 298 GTAGVALAGLLGTVRAQ---------GL---------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARN 359 (481)
Q Consensus 298 GTaaV~LAgll~Alr~~---------g~---------~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~ 359 (481)
.+|=-+++-+++..|-. |. .-.+|.+.+|.|+|.|..|..+|+.+... |+
T Consensus 133 ~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~~f-----G~------- 200 (365)
T 4hy3_A 133 PVAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVGFGDLGKALRRVLSGF-----RA------- 200 (365)
T ss_dssp HHHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEECCSHHHHHHHHHHTTS-----CC-------
T ss_pred HHHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEecCCcccHHHHHhhhhC-----CC-------
Confidence 34555677777776621 21 12456679999999999999999987543 43
Q ss_pred eEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHHhcccCCcEEEee----cCCCCCCCHHHHHHhhhcCC
Q 011618 360 KFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGL----SGVGGVFNEEVLKAMRESDS 435 (481)
Q Consensus 360 ~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~----S~~~g~Ft~evv~~Ma~~~~ 435 (481)
+++.+|+.. ... .+.... ....+|.|+++. .|+++=. ...-+.++++.+..|.
T Consensus 201 ~V~~~d~~~---------~~~---~~~~~g-----~~~~~l~ell~~--aDvV~l~~Plt~~T~~li~~~~l~~mk---- 257 (365)
T 4hy3_A 201 RIRVFDPWL---------PRS---MLEENG-----VEPASLEDVLTK--SDFIFVVAAVTSENKRFLGAEAFSSMR---- 257 (365)
T ss_dssp EEEEECSSS---------CHH---HHHHTT-----CEECCHHHHHHS--CSEEEECSCSSCC---CCCHHHHHTSC----
T ss_pred EEEEECCCC---------CHH---HHhhcC-----eeeCCHHHHHhc--CCEEEEcCcCCHHHHhhcCHHHHhcCC----
Confidence 677777631 111 011100 012468888887 8888833 2224788899998883
Q ss_pred CCCEEEecCCCCC
Q 011618 436 VKPAIFAMSNPTM 448 (481)
Q Consensus 436 erPIIFaLSNPt~ 448 (481)
+..|+.=.|.-..
T Consensus 258 ~gailIN~aRG~~ 270 (365)
T 4hy3_A 258 RGAAFILLSRADV 270 (365)
T ss_dssp TTCEEEECSCGGG
T ss_pred CCcEEEECcCCch
Confidence 5678777775544
No 142
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=86.61 E-value=1.4 Score=45.67 Aligned_cols=82 Identities=16% Similarity=0.303 Sum_probs=52.9
Q ss_pred CceEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHH
Q 011618 323 DQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLL 401 (481)
Q Consensus 323 ~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~ 401 (481)
.-|++|+|+ |-+|.|.++.+... |.. ..++..+|.+= ..+ .. .+
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~l-----Ga~----~~~V~v~D~~~---~~~-------------g~---------~~- 258 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKV-----GIP----DANILKWDIKE---TSR-------------GG---------PF- 258 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHT-----TCC----GGGEEEECHHH---HTT-------------CS---------CC-
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhC-----CCC----cCceEEeeccc---ccc-------------CC---------ch-
Confidence 369999999 99999999887754 431 01466666531 001 00 01
Q ss_pred HHhcccCCcEEEeecCC----CCCCCHHHHHHhhhcCCCCCEEEecC
Q 011618 402 EVVRKVKPHVLLGLSGV----GGVFNEEVLKAMRESDSVKPAIFAMS 444 (481)
Q Consensus 402 e~V~~vkptvLIG~S~~----~g~Ft~evv~~Ma~~~~erPIIFaLS 444 (481)
+.+.. .|++||+--. |-++|+|.|+.|. .+--+|.=+|
T Consensus 259 ~~i~~--aDivIn~vlig~~aP~Lvt~e~v~~m~---k~gsVIVDVA 300 (394)
T 2qrj_A 259 DEIPQ--ADIFINCIYLSKPIAPFTNMEKLNNPN---RRLRTVVDVS 300 (394)
T ss_dssp THHHH--SSEEEECCCCCSSCCCSCCHHHHCCTT---CCCCEEEETT
T ss_pred hhHhh--CCEEEECcCcCCCCCcccCHHHHhcCc---CCCeEEEEEe
Confidence 22444 7999988654 7889999999992 1444666554
No 143
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=86.50 E-value=0.37 Score=48.53 Aligned_cols=33 Identities=21% Similarity=0.421 Sum_probs=29.8
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|+|..|.-||+.|+.+++ ++|.++|.+
T Consensus 37 ~~VlivG~GGlG~~ia~~La~~Gv-----------g~itlvD~d 69 (346)
T 1y8q_A 37 SRVLLVGLKGLGAEIAKNLILAGV-----------KGLTMLDHE 69 (346)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC-----------SEEEEECCC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCC-----------CEEEEEECC
Confidence 899999999999999999998755 689999976
No 144
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=86.41 E-value=0.32 Score=47.06 Aligned_cols=32 Identities=28% Similarity=0.465 Sum_probs=26.1
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.||.|+|+|..|.++|..|... |. +++++|++
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 39 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRA-----GL-------STWGADLN 39 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECC
Confidence 6899999999999999988753 43 57778874
No 145
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=86.37 E-value=0.82 Score=44.43 Aligned_cols=95 Identities=15% Similarity=0.120 Sum_probs=54.8
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
.||.|+|+|..|.++|..|... |. +++++|++- +.+. .++... .....++.|+
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~~------~~~~----~l~~~g-----~~~~~~~~~~ 74 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKN-----GF-------KVTVWNRTL------SKCD----ELVEHG-----ASVCESPAEV 74 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSG------GGGH----HHHHTT-----CEECSSHHHH
T ss_pred CEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCCH------HHHH----HHHHCC-----CeEcCCHHHH
Confidence 7999999999999999998754 43 677777731 1111 111111 0123568888
Q ss_pred hcccCCcEEEeecCCCCCCCHHHH---HHhhhcCCCCCEEEecCCCCC
Q 011618 404 VRKVKPHVLLGLSGVGGVFNEEVL---KAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 404 V~~vkptvLIG~S~~~g~Ft~evv---~~Ma~~~~erPIIFaLSNPt~ 448 (481)
++. +|++|=+-. ...-.++++ +.+.+...+..+|.-+|+-.+
T Consensus 75 ~~~--aDvvi~~vp-~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~ 119 (310)
T 3doj_A 75 IKK--CKYTIAMLS-DPCAALSVVFDKGGVLEQICEGKGYIDMSTVDA 119 (310)
T ss_dssp HHH--CSEEEECCS-SHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCH
T ss_pred HHh--CCEEEEEcC-CHHHHHHHHhCchhhhhccCCCCEEEECCCCCH
Confidence 877 777773221 122334454 333332345667777775443
No 146
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=86.33 E-value=0.7 Score=48.30 Aligned_cols=104 Identities=13% Similarity=0.162 Sum_probs=62.0
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhcccc-ccCCcCCcCCCCCHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAK-DPGDFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~-~~~~~~~~~~~~~L~e 402 (481)
.||.|+|+|..|..+|..|... |. +++++|+..= ......+.+-. +..+ +.....++.|
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~~------~~~~l~~~~g~~~~~~--~i~~~~~~~e 61 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEK-----GF-------KVAVFNRTYS------KSEEFMKANASAPFAG--NLKAFETMEA 61 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSHH------HHHHHHHHTTTSTTGG--GEEECSCHHH
T ss_pred CEEEEEChHHHHHHHHHHHHHC-----CC-------EEEEEeCCHH------HHHHHHHhcCCCCCCC--CeEEECCHHH
Confidence 3799999999999999887653 53 5778886311 01111110000 0000 0012457889
Q ss_pred Hhccc-CCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 403 VVRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 403 ~V~~v-kptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
+++.. ++|++| ++..++...+++++.+.....+..||..+||-.+
T Consensus 62 ~v~~l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iIId~sng~~ 107 (478)
T 1pgj_A 62 FAASLKKPRKAL-ILVQAGAATDSTIEQLKKVFEKGDILVDTGNAHF 107 (478)
T ss_dssp HHHHBCSSCEEE-ECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCCH
T ss_pred HHhcccCCCEEE-EecCChHHHHHHHHHHHhhCCCCCEEEECCCCCh
Confidence 88743 488887 4433455677888877543445668888998765
No 147
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=86.20 E-value=2.2 Score=42.48 Aligned_cols=91 Identities=15% Similarity=0.242 Sum_probs=55.8
Q ss_pred CCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCC
Q 011618 319 TDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGA 398 (481)
Q Consensus 319 ~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~ 398 (481)
.+|.+.+|.|+|.|..|..+|+.+... |+ +++.+|++.- . . .+.... . ...
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~~-----G~-------~V~~~d~~~~------~--~----~~~~~g-~----~~~ 192 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIPF-----GV-------KLYYWSRHRK------V--N----VEKELK-A----RYM 192 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGG-----TC-------EEEEECSSCC------H--H----HHHHHT-E----EEC
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEECCCcc------h--h----hhhhcC-c----eec
Confidence 456669999999999999999987643 43 6888887421 0 1 011000 0 112
Q ss_pred CHHHHhcccCCcEEEeecC----CCCCCCHHHHHHhhhcCCCCCEEEecCC
Q 011618 399 SLLEVVRKVKPHVLLGLSG----VGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (481)
Q Consensus 399 ~L~e~V~~vkptvLIG~S~----~~g~Ft~evv~~Ma~~~~erPIIFaLSN 445 (481)
+|.|+++. +|+++=.-. ..++++++.+..|. +. ++.-.|.
T Consensus 193 ~l~e~l~~--aDiVil~vp~~~~t~~~i~~~~~~~mk----~g-ilin~sr 236 (333)
T 2d0i_A 193 DIDELLEK--SDIVILALPLTRDTYHIINEERVKKLE----GK-YLVNIGR 236 (333)
T ss_dssp CHHHHHHH--CSEEEECCCCCTTTTTSBCHHHHHHTB----TC-EEEECSC
T ss_pred CHHHHHhh--CCEEEEcCCCChHHHHHhCHHHHhhCC----CC-EEEECCC
Confidence 57777776 787763321 12567777777773 34 6665653
No 148
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=86.09 E-value=0.72 Score=44.51 Aligned_cols=49 Identities=18% Similarity=0.218 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 303 ~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
...|++.+++..+.+++. .+++|.|||.+|.++|..|.+ .| +++++|++
T Consensus 111 d~~G~~~~L~~~~~~l~~---k~vlV~GaGgiG~aia~~L~~-----~G--------~V~v~~r~ 159 (287)
T 1nvt_A 111 DGIGARMALEEEIGRVKD---KNIVIYGAGGAARAVAFELAK-----DN--------NIIIANRT 159 (287)
T ss_dssp HHHHHHHHHHHHHCCCCS---CEEEEECCSHHHHHHHHHHTS-----SS--------EEEEECSS
T ss_pred CHHHHHHHHHHhCCCcCC---CEEEEECchHHHHHHHHHHHH-----CC--------CEEEEECC
Confidence 678899999988877777 999999998766666665542 33 58888874
No 149
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=86.08 E-value=0.79 Score=43.52 Aligned_cols=34 Identities=15% Similarity=0.189 Sum_probs=26.4
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.||.|+|+|..|..+|..+... |.. .+++++|++
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~-----g~~-----~~V~~~d~~ 40 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRD-----HPH-----YKIVGYNRS 40 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----CTT-----SEEEEECSS
T ss_pred ceEEEEeeCHHHHHHHHHHHhC-----CCC-----cEEEEEcCC
Confidence 6899999999999999988654 211 368888864
No 150
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=85.84 E-value=0.43 Score=47.17 Aligned_cols=111 Identities=17% Similarity=0.309 Sum_probs=65.2
Q ss_pred eEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccc----cCCcCCcCCCCCH
Q 011618 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKD----PGDFMGLREGASL 400 (481)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~----~~~~~~~~~~~~L 400 (481)
||.|+|||+.|.++|-.++.. |+ ..++|+|.+ .++ +......+.+. ..... .....+.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~-----~l------~el~L~Di~----~~~--~~g~~~dl~~~~~~~~~~~~-i~~t~d~ 62 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR-----GY------DDLLLIART----PGK--PQGEALDLAHAAAELGVDIR-ISGSNSY 62 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-----TC------SCEEEECSS----TTH--HHHHHHHHHHHHHHHTCCCC-EEEESCG
T ss_pred CEEEECcCHHHHHHHHHHHhC-----CC------CEEEEEcCC----hhh--HHHHHHHHHHhhhhcCCCeE-EEECCCH
Confidence 689999999999999766532 54 269999985 111 11111111110 00000 0112454
Q ss_pred HHHhcccCCcEEEeecCCCC---C-----------CCHHHHHHhhhcCCCCCEEEecCCCCCCCCCCCCHHHHHhc
Q 011618 401 LEVVRKVKPHVLLGLSGVGG---V-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNGLFSCCVTTFFFY 462 (481)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~g---~-----------Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~~~t~eda~~w 462 (481)
+++++ +|++|=+.+.|. - .-+++++.|.+ ++...+|+-.|||.. ...+-+++.
T Consensus 63 -~a~~~--aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~iiv~tNPv~-----~~t~~~~k~ 129 (308)
T 2d4a_B 63 -EDMRG--SDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKA-YAKDAIVVITTNPVD-----AMTYVMYKK 129 (308)
T ss_dssp -GGGTT--CSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECCSSHH-----HHHHHHHHH
T ss_pred -HHhCC--CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHH-HCCCeEEEEeCCchH-----HHHHHHHHh
Confidence 67888 899986555443 1 13567777754 678887777899987 334445454
No 151
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=85.80 E-value=1.9 Score=43.22 Aligned_cols=58 Identities=17% Similarity=0.340 Sum_probs=40.6
Q ss_pred hHHHHHHHHHHHHHHh-------------CCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEe
Q 011618 299 TAGVALAGLLGTVRAQ-------------GLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLD 365 (481)
Q Consensus 299 TaaV~LAgll~Alr~~-------------g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD 365 (481)
+|=-+++.+++..|-. .....+|.+.+|.|+|.|..|..+|+.+... |+ +++.+|
T Consensus 103 vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d 170 (324)
T 3hg7_A 103 MSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHF-----GM-------KVLGVS 170 (324)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEC
T ss_pred HHHHHHHHHHHHHhChHHHHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHHHhC-----CC-------EEEEEc
Confidence 3445677777666521 1123456669999999999999999998654 43 688888
Q ss_pred ccc
Q 011618 366 KDG 368 (481)
Q Consensus 366 ~~G 368 (481)
+..
T Consensus 171 r~~ 173 (324)
T 3hg7_A 171 RSG 173 (324)
T ss_dssp SSC
T ss_pred CCh
Confidence 764
No 152
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=85.76 E-value=4.4 Score=39.99 Aligned_cols=120 Identities=23% Similarity=0.241 Sum_probs=76.4
Q ss_pred CCccccCc---chhHHHHHHHHHHHHHHh---------CC---------CCCCCCCceEEEeCccHHHHHHHHHHHHHHH
Q 011618 289 FCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL---------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAA 347 (481)
Q Consensus 289 ~~~FNDDi---QGTaaV~LAgll~Alr~~---------g~---------~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~ 347 (481)
+.+.|--- +.+|=-+++.+++..|-. |. .-.+|.+.+|.|+|.|..|..+|+.+...
T Consensus 89 i~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~-- 166 (311)
T 2cuk_A 89 IRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALAF-- 166 (311)
T ss_dssp CEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHHT--
T ss_pred cEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHHHHHHHHC--
Confidence 65555432 234445688888876632 10 01356669999999999999999988643
Q ss_pred HHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHHhcccCCcEEEeec----CCCCCCC
Q 011618 348 RMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFN 423 (481)
Q Consensus 348 ~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S----~~~g~Ft 423 (481)
|+ +++.+|+.. .. .. + ...+|.|+++. .|+++=.- ...+.++
T Consensus 167 ---G~-------~V~~~d~~~----~~--~~------~----------~~~~l~ell~~--aDvV~l~~p~~~~t~~li~ 212 (311)
T 2cuk_A 167 ---GM-------RVVYHARTP----KP--LP------Y----------PFLSLEELLKE--ADVVSLHTPLTPETHRLLN 212 (311)
T ss_dssp ---TC-------EEEEECSSC----CS--SS------S----------CBCCHHHHHHH--CSEEEECCCCCTTTTTCBC
T ss_pred ---CC-------EEEEECCCC----cc--cc------c----------ccCCHHHHHhh--CCEEEEeCCCChHHHhhcC
Confidence 43 688888742 11 11 1 02358888877 78887542 1246788
Q ss_pred HHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 424 EEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 424 ~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
++.++.|. +..++.=.|.-..
T Consensus 213 ~~~l~~mk----~ga~lin~srg~~ 233 (311)
T 2cuk_A 213 RERLFAMK----RGAILLNTARGAL 233 (311)
T ss_dssp HHHHTTSC----TTCEEEECSCGGG
T ss_pred HHHHhhCC----CCcEEEECCCCCc
Confidence 88887772 5678887877444
No 153
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=85.57 E-value=0.33 Score=47.67 Aligned_cols=103 Identities=21% Similarity=0.240 Sum_probs=59.4
Q ss_pred eEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccc----cCCcCCcCCCCCH
Q 011618 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKD----PGDFMGLREGASL 400 (481)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~----~~~~~~~~~~~~L 400 (481)
||.|+|||+.|.++|..+... ++ -..++++|.+- ++ +......+.+. ..... .....++
T Consensus 2 kI~VIGaG~vG~~la~~la~~-----~~-----g~~V~l~D~~~----~~--~~~~~~~l~~~~~~~~~~~~-i~~t~d~ 64 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK-----QL-----ARELVLLDVVE----GI--PQGKALDMYESGPVGLFDTK-VTGSNDY 64 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSS----SH--HHHHHHHHHTTHHHHTCCCE-EEEESCG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCh----hH--HHHHHHhHHhhhhcccCCcE-EEECCCH
Confidence 799999999999999886542 21 14799999852 11 11111011110 00000 0112456
Q ss_pred HHHhcccCCcEEEeecCCC---CC-------C----CHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 401 LEVVRKVKPHVLLGLSGVG---GV-------F----NEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~---g~-------F----t~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
.+ ++. +|++|=+.+.| |- . -+++++.|++ ++...+|+-.|||..
T Consensus 65 ~~-l~~--aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~~~~~viv~tNP~~ 122 (310)
T 1guz_A 65 AD-TAN--SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMK-HSKNPIIIVVSNPLD 122 (310)
T ss_dssp GG-GTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCSSCEEEECCSSHH
T ss_pred HH-HCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCcEEEEEcCchH
Confidence 55 776 88887544332 32 1 1466677754 677888888999986
No 154
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=85.39 E-value=0.71 Score=43.87 Aligned_cols=95 Identities=15% Similarity=0.152 Sum_probs=54.7
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
.||.|+|+|..|..+|..+.. .|. +++++|++. +....+++.. .....++.|+
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~-----~g~-------~V~~~~~~~----------~~~~~~~~~g-----~~~~~~~~~~ 57 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLK-----EGV-------TVYAFDLME----------ANVAAVVAQG-----AQACENNQKV 57 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHH-----TTC-------EEEEECSSH----------HHHHHHHTTT-----CEECSSHHHH
T ss_pred CEEEEECccHHHHHHHHHHHH-----CCC-------eEEEEeCCH----------HHHHHHHHCC-----CeecCCHHHH
Confidence 689999999999999988764 242 577777631 1111122111 0123468888
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHH---HhhhcCCCCCEEEecCCCCC
Q 011618 404 VRKVKPHVLLGLSGVGGVFNEEVLK---AMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 404 V~~vkptvLIG~S~~~g~Ft~evv~---~Ma~~~~erPIIFaLSNPt~ 448 (481)
++. +|++|=+.. ...-.++++. .+.....+..+|..+||-.+
T Consensus 58 ~~~--~D~vi~~vp-~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~ 102 (301)
T 3cky_A 58 AAA--SDIIFTSLP-NAGIVETVMNGPGGVLSACKAGTVIVDMSSVSP 102 (301)
T ss_dssp HHH--CSEEEECCS-SHHHHHHHHHSTTCHHHHSCTTCEEEECCCCCH
T ss_pred HhC--CCEEEEECC-CHHHHHHHHcCcchHhhcCCCCCEEEECCCCCH
Confidence 876 788774331 1223455553 33222345667777887654
No 155
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=85.29 E-value=3.8 Score=40.70 Aligned_cols=141 Identities=16% Similarity=0.122 Sum_probs=87.4
Q ss_pred EEEeecCCCchHHHHHHHHh-hcCCccccCcc---hhHHHHHHHHHHHHHH---------hCC-------CCCCCCCceE
Q 011618 267 IVQFEDFQMKWAFETLERYR-KRFCMFNDDIQ---GTAGVALAGLLGTVRA---------QGL-------SLTDFADQKI 326 (481)
Q Consensus 267 ~IqfEDf~~~naf~iL~ryr-~~~~~FNDDiQ---GTaaV~LAgll~Alr~---------~g~-------~l~dl~~~ri 326 (481)
.|+.--.+..|- . ++..+ ..+.+.|---. .+|=-+++.+++..|- .|. .-.+|.+.+|
T Consensus 72 ~I~~~~~G~d~i-d-~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~v 149 (331)
T 1xdw_A 72 YILTRTAGTDHI-D-KEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTV 149 (331)
T ss_dssp EEEESSSCCTTB-C-HHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEE
T ss_pred EEEEcccccccc-C-HHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEE
Confidence 566555555542 1 22222 33666664332 3455578888887762 121 1135666999
Q ss_pred EEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHHhcc
Q 011618 327 VVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRK 406 (481)
Q Consensus 327 v~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~V~~ 406 (481)
.|+|.|..|..+|+.+... |+ +++.+|+.. .. .+ + .++ ...+|.|+++.
T Consensus 150 gIiG~G~IG~~~A~~l~~~-----G~-------~V~~~d~~~----~~-~~---~-~~~----------~~~~l~ell~~ 198 (331)
T 1xdw_A 150 GVVGLGRIGRVAAQIFHGM-----GA-------TVIGEDVFE----IK-GI---E-DYC----------TQVSLDEVLEK 198 (331)
T ss_dssp EEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSC----CC-SC---T-TTC----------EECCHHHHHHH
T ss_pred EEECcCHHHHHHHHHHHHC-----CC-------EEEEECCCc----cH-HH---H-hcc----------ccCCHHHHHhh
Confidence 9999999999999988754 43 688888742 11 11 1 111 12368898887
Q ss_pred cCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCEEEecCCC
Q 011618 407 VKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNP 446 (481)
Q Consensus 407 vkptvLIG~S----~~~g~Ft~evv~~Ma~~~~erPIIFaLSNP 446 (481)
.|+++=.- ...++++++.++.|. +..++.=.|.-
T Consensus 199 --aDvV~~~~p~t~~t~~li~~~~l~~mk----~ga~lin~srg 236 (331)
T 1xdw_A 199 --SDIITIHAPYIKENGAVVTRDFLKKMK----DGAILVNCARG 236 (331)
T ss_dssp --CSEEEECCCCCTTTCCSBCHHHHHTSC----TTEEEEECSCG
T ss_pred --CCEEEEecCCchHHHHHhCHHHHhhCC----CCcEEEECCCc
Confidence 89888541 124788999999883 56788877743
No 156
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=85.23 E-value=0.62 Score=45.88 Aligned_cols=35 Identities=29% Similarity=0.437 Sum_probs=27.6
Q ss_pred CceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
+.||||+|||.||+..|..|... |-+ -+|.++|++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~-----~~~-----~~Vtlie~~ 36 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLA-----DPS-----IEVTLIEPN 36 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CTT-----SEEEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhc-----CcC-----CeEEEEeCC
Confidence 47999999999999999988654 221 268888875
No 157
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=85.10 E-value=4.2 Score=40.66 Aligned_cols=151 Identities=13% Similarity=0.216 Sum_probs=90.2
Q ss_pred HhCCce-EEEeecCCCchHHHHHHHHh-hcCCccccCc---chhHHHHHHHHHHHHHHhC--------------C-CCCC
Q 011618 261 ARWPKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDI---QGTAGVALAGLLGTVRAQG--------------L-SLTD 320 (481)
Q Consensus 261 ~~~P~~-~IqfEDf~~~naf~iL~ryr-~~~~~FNDDi---QGTaaV~LAgll~Alr~~g--------------~-~l~d 320 (481)
...|+. .|+.-=.+..|- . ++..+ ..+++.|--- +.+|=-+++.+++..|-.. . .-.+
T Consensus 57 ~~~~~Lk~I~~~~~G~d~i-d-~~~~~~~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~~~~~ 134 (324)
T 3evt_A 57 RPTNQLKFVQVISAGVDYL-P-LKALQAAGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTST 134 (324)
T ss_dssp STTCCCCEEECSSSCCTTS-C-HHHHHHTTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCCC
T ss_pred hhCCCceEEEECCcccccc-C-HHHHHHCCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCCCCcc
Confidence 456776 676655555542 2 23333 3477777653 2344456778877765210 0 1345
Q ss_pred CCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCH
Q 011618 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (481)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L 400 (481)
|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+..- ..+.+.. .+ ...+|
T Consensus 135 l~gktvGIiGlG~IG~~vA~~l~~~-----G~-------~V~~~dr~~~---~~~~~~~---~~-----------~~~~l 185 (324)
T 3evt_A 135 LTGQQLLIYGTGQIGQSLAAKASAL-----GM-------HVIGVNTTGH---PADHFHE---TV-----------AFTAT 185 (324)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSCC---CCTTCSE---EE-----------EGGGC
T ss_pred ccCCeEEEECcCHHHHHHHHHHHhC-----CC-------EEEEECCCcc---hhHhHhh---cc-----------ccCCH
Confidence 6669999999999999999988654 43 6888887521 0011110 00 12357
Q ss_pred HHHhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 401 LEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 401 ~e~V~~vkptvLIG~S----~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
.|+++. .|+++=.- ..-+.|+++.+..|. +..++.=.|.-..
T Consensus 186 ~ell~~--aDvV~l~lPlt~~t~~li~~~~l~~mk----~gailIN~aRG~~ 231 (324)
T 3evt_A 186 ADALAT--ANFIVNALPLTPTTHHLFSTELFQQTK----QQPMLINIGRGPA 231 (324)
T ss_dssp HHHHHH--CSEEEECCCCCGGGTTCBSHHHHHTCC----SCCEEEECSCGGG
T ss_pred HHHHhh--CCEEEEcCCCchHHHHhcCHHHHhcCC----CCCEEEEcCCChh
Confidence 777776 78777331 113678888888883 5667776665444
No 158
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=85.02 E-value=0.6 Score=45.36 Aligned_cols=104 Identities=15% Similarity=0.113 Sum_probs=57.1
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCC-CCCChhhhccccccCCcCCcCCCCCHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (481)
.||.|+|||+.|..+|..|..+ | .+++++|+.-+ ..=+ ..+.- ......-.+....-..++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~-~~i~~~g~~~---~~~~g~~~~~~~~~~~~~~~ 66 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS-----G-------EDVHFLLRRDY-EAIAGNGLKV---FSINGDFTLPHVKGYRAPEE 66 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT-----S-------CCEEEECSTTH-HHHHHTCEEE---EETTCCEEESCCCEESCHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----C-------CeEEEEEcCcH-HHHHhCCCEE---EcCCCeEEEeeceeecCHHH
Confidence 5899999999999999888653 4 25888877531 0000 00000 00000000000011234544
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
++. +|++| ++. +--.++++++.++....+..+|..+.|-..
T Consensus 67 -~~~--~D~vi-lav-k~~~~~~~l~~l~~~l~~~~~iv~l~nGi~ 107 (312)
T 3hn2_A 67 -IGP--MDLVL-VGL-KTFANSRYEELIRPLVEEGTQILTLQNGLG 107 (312)
T ss_dssp -HCC--CSEEE-ECC-CGGGGGGHHHHHGGGCCTTCEEEECCSSSS
T ss_pred -cCC--CCEEE-Eec-CCCCcHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 443 78777 554 344566888888654556677888888764
No 159
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=84.98 E-value=0.72 Score=43.99 Aligned_cols=93 Identities=17% Similarity=0.132 Sum_probs=50.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
.||.|+|+|..|.++|..+... | .+++++|++- +.... +++..- ....++.|+
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~~------~~~~~----~~~~g~-----~~~~~~~~~ 54 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRA-----G-------FDVTVWNRNP------AKCAP----LVALGA-----RQASSPAEV 54 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH-----T-------CCEEEECSSG------GGGHH----HHHHTC-----EECSCHHHH
T ss_pred CeEEEEccCHHHHHHHHHHHHC-----C-------CeEEEEcCCH------HHHHH----HHHCCC-----eecCCHHHH
Confidence 3799999999999999998765 4 2577777631 11111 111110 113467777
Q ss_pred hcccCCcEEEeecCCCCCCCHHHH---HHhhhcCCCCCEEEecCCC
Q 011618 404 VRKVKPHVLLGLSGVGGVFNEEVL---KAMRESDSVKPAIFAMSNP 446 (481)
Q Consensus 404 V~~vkptvLIG~S~~~g~Ft~evv---~~Ma~~~~erPIIFaLSNP 446 (481)
++. +|++|= +.....-.++++ +.+.+...+..+|.-.|+-
T Consensus 55 ~~~--advvi~-~v~~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~ 97 (287)
T 3pdu_A 55 CAA--CDITIA-MLADPAAAREVCFGANGVLEGIGGGRGYIDMSTV 97 (287)
T ss_dssp HHH--CSEEEE-CCSSHHHHHHHHHSTTCGGGTCCTTCEEEECSCC
T ss_pred HHc--CCEEEE-EcCCHHHHHHHHcCchhhhhcccCCCEEEECCCC
Confidence 776 676662 221122334444 3333223345566666653
No 160
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=84.90 E-value=1 Score=42.68 Aligned_cols=104 Identities=23% Similarity=0.340 Sum_probs=60.3
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhcc
Q 011618 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPF 384 (481)
Q Consensus 305 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~f 384 (481)
.|++.+++..+. +|++ +++|+|+|.+|..+|..+.. .|. +++++|++. + ..+.+
T Consensus 102 ~g~~~~l~~~~~---~l~~-~v~iiG~G~~g~~~a~~l~~-----~g~-------~v~v~~r~~----~------~~~~l 155 (263)
T 2d5c_A 102 PGFLEALKAGGI---PLKG-PALVLGAGGAGRAVAFALRE-----AGL-------EVWVWNRTP----Q------RALAL 155 (263)
T ss_dssp HHHHHHHHHTTC---CCCS-CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSH----H------HHHHH
T ss_pred HHHHHHHHHhCC---CCCC-eEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECCH----H------HHHHH
Confidence 478888887665 4667 99999999999999887754 342 588888741 1 11122
Q ss_pred ccccCCcCCcCCCCCHHHHhcccCCcEEEeecCCCCCCC--HHHHHHhhhcCCCCCEEEecCC
Q 011618 385 AKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFN--EEVLKAMRESDSVKPAIFAMSN 445 (481)
Q Consensus 385 A~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft--~evv~~Ma~~~~erPIIFaLSN 445 (481)
++.... ...++.++ +. +|++|-+... +... ++.+. . +...+..+|+-++.
T Consensus 156 ~~~~~~-----~~~~~~~~-~~--~Divi~~tp~-~~~~~~~~~l~-~-~~l~~g~~viD~~~ 207 (263)
T 2d5c_A 156 AEEFGL-----RAVPLEKA-RE--ARLLVNATRV-GLEDPSASPLP-A-ELFPEEGAAVDLVY 207 (263)
T ss_dssp HHHHTC-----EECCGGGG-GG--CSEEEECSST-TTTCTTCCSSC-G-GGSCSSSEEEESCC
T ss_pred HHHhcc-----chhhHhhc-cC--CCEEEEccCC-CCCCCCCCCCC-H-HHcCCCCEEEEeec
Confidence 221100 01346666 55 8999976653 3221 02221 1 11335668887763
No 161
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=84.72 E-value=3.7 Score=41.12 Aligned_cols=125 Identities=14% Similarity=0.129 Sum_probs=74.5
Q ss_pred cCCccccCc---chhHHHHHHHHHHHHHHh---------CC------CCCCCCCceEEEeCccHHHHHHHHHHHHHHHHH
Q 011618 288 RFCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARM 349 (481)
Q Consensus 288 ~~~~FNDDi---QGTaaV~LAgll~Alr~~---------g~------~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~ 349 (481)
.+++.|--- +.+|=-+++.+++..|-. |. .-.+|.+.+|.|+|.|..|..+|+.+...
T Consensus 112 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIGlG~IG~~vA~~l~~~---- 187 (335)
T 2g76_A 112 GILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQSF---- 187 (335)
T ss_dssp TCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEECCSHHHHHHHHHHHTT----
T ss_pred CeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEEeECHHHHHHHHHHHHC----
Confidence 466666532 234455688888877642 10 11345569999999999999999987643
Q ss_pred cCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHHhcccCCcEEEeecC----CCCCCCHH
Q 011618 350 AGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG----VGGVFNEE 425 (481)
Q Consensus 350 ~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~----~~g~Ft~e 425 (481)
|+ +++.+|++. +.. .+.... ....+|.|+++. .|+++=.-. ..++++++
T Consensus 188 -G~-------~V~~~d~~~---------~~~---~~~~~g-----~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~ 240 (335)
T 2g76_A 188 -GM-------KTIGYDPII---------SPE---VSASFG-----VQQLPLEEIWPL--CDFITVHTPLLPSTTGLLNDN 240 (335)
T ss_dssp -TC-------EEEEECSSS---------CHH---HHHHTT-----CEECCHHHHGGG--CSEEEECCCCCTTTTTSBCHH
T ss_pred -CC-------EEEEECCCc---------chh---hhhhcC-----ceeCCHHHHHhc--CCEEEEecCCCHHHHHhhCHH
Confidence 42 688888631 110 111100 012357777776 777774321 13567777
Q ss_pred HHHHhhhcCCCCCEEEecCCCC
Q 011618 426 VLKAMRESDSVKPAIFAMSNPT 447 (481)
Q Consensus 426 vv~~Ma~~~~erPIIFaLSNPt 447 (481)
.++.|. +..++.=.|.-.
T Consensus 241 ~l~~mk----~gailIN~arg~ 258 (335)
T 2g76_A 241 TFAQCK----KGVRVVNCARGG 258 (335)
T ss_dssp HHTTSC----TTEEEEECSCTT
T ss_pred HHhhCC----CCcEEEECCCcc
Confidence 777773 456777666633
No 162
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=84.72 E-value=0.95 Score=43.15 Aligned_cols=93 Identities=10% Similarity=0.133 Sum_probs=53.1
Q ss_pred ceEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHH
Q 011618 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (481)
.||.|+|+ |..|..+|..|.. .|. +++++|++- +.+.. +.... . ...++.+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~-----~g~-------~V~~~~r~~------~~~~~----~~~~g--~----~~~~~~~ 63 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD-----SAH-------HLAAIEIAP------EGRDR----LQGMG--I----PLTDGDG 63 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----SSS-------EEEEECCSH------HHHHH----HHHTT--C----CCCCSSG
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCC-------EEEEEECCH------HHHHH----HHhcC--C----CcCCHHH
Confidence 38999999 9999999998864 342 678887631 01111 11100 0 0124556
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
+++. +|++| ++..+.. .+++++.+.....+..||.-+|+..+
T Consensus 64 ~~~~--aDvVi-~av~~~~-~~~v~~~l~~~l~~~~ivv~~s~~~~ 105 (286)
T 3c24_A 64 WIDE--ADVVV-LALPDNI-IEKVAEDIVPRVRPGTIVLILDAAAP 105 (286)
T ss_dssp GGGT--CSEEE-ECSCHHH-HHHHHHHHGGGSCTTCEEEESCSHHH
T ss_pred HhcC--CCEEE-EcCCchH-HHHHHHHHHHhCCCCCEEEECCCCch
Confidence 6665 77777 3322333 57777777542344556666777543
No 163
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=84.63 E-value=0.47 Score=43.87 Aligned_cols=93 Identities=14% Similarity=0.133 Sum_probs=55.2
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEE-EeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFL-LDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~l-vD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (481)
.||.|+|+|..|..+|..+... |. ++.+ +|++ .+.+....+.+-- ....+..|
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~-----g~-------~V~~v~~r~------~~~~~~l~~~~g~--------~~~~~~~~ 77 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA-----QI-------PAIIANSRG------PASLSSVTDRFGA--------SVKAVELK 77 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT-----TC-------CEEEECTTC------GGGGHHHHHHHTT--------TEEECCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEECCC------HHHHHHHHHHhCC--------CcccChHH
Confidence 5899999999999999987653 43 3554 5542 1112221111110 01123455
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
+++. +|++| ++. |....+++++.++. .+..+|+.++||.+
T Consensus 78 ~~~~--aDvVi-lav-p~~~~~~v~~~l~~--~~~~ivi~~~~g~~ 117 (220)
T 4huj_A 78 DALQ--ADVVI-LAV-PYDSIADIVTQVSD--WGGQIVVDASNAID 117 (220)
T ss_dssp HHTT--SSEEE-EES-CGGGHHHHHTTCSC--CTTCEEEECCCCBC
T ss_pred HHhc--CCEEE-EeC-ChHHHHHHHHHhhc--cCCCEEEEcCCCCC
Confidence 6766 78877 332 44556777777643 34558899999884
No 164
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=84.55 E-value=4.2 Score=41.01 Aligned_cols=115 Identities=17% Similarity=0.218 Sum_probs=69.2
Q ss_pred hHHHHHHHHHHHHHHh---------C----C-CC---CCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeE
Q 011618 299 TAGVALAGLLGTVRAQ---------G----L-SL---TDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKF 361 (481)
Q Consensus 299 TaaV~LAgll~Alr~~---------g----~-~l---~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i 361 (481)
+|=-+++-+++..|-. | . .. .+|.+.+|.|+|.|..|..+|+.+... |+ ++
T Consensus 130 vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~vA~~l~~~-----G~-------~V 197 (340)
T 4dgs_A 130 VADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRALASRAEAF-----GM-------SV 197 (340)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHHHHHHHHHTT-----TC-------EE
T ss_pred HHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHHHHHHHHHHC-----CC-------EE
Confidence 4555677777777631 1 0 11 456669999999999999999987643 43 68
Q ss_pred EEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHHhcccCCcEEEeecC----CCCCCCHHHHHHhhhcCCCC
Q 011618 362 FLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG----VGGVFNEEVLKAMRESDSVK 437 (481)
Q Consensus 362 ~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~----~~g~Ft~evv~~Ma~~~~er 437 (481)
+.+|+.. .. .. .+ ....+|.|+++. .|+++=.-- .-+.++++.++.|. +.
T Consensus 198 ~~~dr~~----~~-~~-----~~----------~~~~sl~ell~~--aDvVil~vP~t~~t~~li~~~~l~~mk----~g 251 (340)
T 4dgs_A 198 RYWNRST----LS-GV-----DW----------IAHQSPVDLARD--SDVLAVCVAASAATQNIVDASLLQALG----PE 251 (340)
T ss_dssp EEECSSC----CT-TS-----CC----------EECSSHHHHHHT--CSEEEECC----------CHHHHHHTT----TT
T ss_pred EEEcCCc----cc-cc-----Cc----------eecCCHHHHHhc--CCEEEEeCCCCHHHHHHhhHHHHhcCC----CC
Confidence 8888642 11 00 01 012469999987 898874321 23778899999983 56
Q ss_pred CEEEecCCCCCCCC
Q 011618 438 PAIFAMSNPTMNGL 451 (481)
Q Consensus 438 PIIFaLSNPt~~aE 451 (481)
.++.-.|.-..--|
T Consensus 252 ailIN~aRG~vvde 265 (340)
T 4dgs_A 252 GIVVNVARGNVVDE 265 (340)
T ss_dssp CEEEECSCC-----
T ss_pred CEEEECCCCcccCH
Confidence 68877776555333
No 165
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=84.39 E-value=0.66 Score=45.53 Aligned_cols=102 Identities=16% Similarity=0.144 Sum_probs=59.2
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCC-CCCChh--hhccccccCCcCCcCCCCCH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPA--AAPFAKDPGDFMGLREGASL 400 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~--k~~fA~~~~~~~~~~~~~~L 400 (481)
.||.|+|+|+.|..+|..|..+ | .++.++|+.--+..-+ ..+... ...+... . ....++
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~-----g-------~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~---~---~~~~~~ 65 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALA-----G-------EAINVLARGATLQALQTAGLRLTEDGATHTLP---V---RATHDA 65 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHT-----T-------CCEEEECCHHHHHHHHHTCEEEEETTEEEEEC---C---EEESCH
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----C-------CEEEEEEChHHHHHHHHCCCEEecCCCeEEEe---e---eEECCH
Confidence 6899999999999999988653 4 2578888631100000 000000 0000000 0 112356
Q ss_pred HHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 401 LEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
.+ ++. +|++| ++. +--..+++++.++....+..+|..++|..+
T Consensus 66 ~~-~~~--~D~Vi-lav-k~~~~~~~~~~l~~~l~~~~~iv~~~nGi~ 108 (335)
T 3ghy_A 66 AA-LGE--QDVVI-VAV-KAPALESVAAGIAPLIGPGTCVVVAMNGVP 108 (335)
T ss_dssp HH-HCC--CSEEE-ECC-CHHHHHHHHGGGSSSCCTTCEEEECCSSSC
T ss_pred HH-cCC--CCEEE-EeC-CchhHHHHHHHHHhhCCCCCEEEEECCCCc
Confidence 65 454 78877 443 334677888888654456778889999953
No 166
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=84.24 E-value=12 Score=37.72 Aligned_cols=153 Identities=13% Similarity=0.110 Sum_probs=87.8
Q ss_pred HhCCce-EEEeecCCCchHHHHHHHHhhcCCccccCc---chhHHHHHHHHHHHHHHh---------CC-----------
Q 011618 261 ARWPKA-IVQFEDFQMKWAFETLERYRKRFCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL----------- 316 (481)
Q Consensus 261 ~~~P~~-~IqfEDf~~~naf~iL~ryr~~~~~FNDDi---QGTaaV~LAgll~Alr~~---------g~----------- 316 (481)
...|+. .|+.--.+..|- .+-.--+.-+.+.|--- +.+|=-+++.+++..|-. |.
T Consensus 81 ~~~~~Lk~I~~~~~G~d~i-d~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~ 159 (347)
T 1mx3_A 81 EKFKALRIIVRIGSGFDNI-DIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREV 159 (347)
T ss_dssp TTCSSCCEEEESSSCCTTB-CHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHH
T ss_pred hhCCCCCEEEEcccccCcc-cHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCccccccccccc
Confidence 345776 888888887763 22222223477777433 345555788999888721 21
Q ss_pred --CCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCc
Q 011618 317 --SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGL 394 (481)
Q Consensus 317 --~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~ 394 (481)
...+|.+.+|.|+|.|..|..+|+.+... |+ +++.+|++- .. .....+ ..
T Consensus 160 ~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~~-----G~-------~V~~~d~~~----~~----~~~~~~---g~----- 211 (347)
T 1mx3_A 160 ASGAARIRGETLGIIGLGRVGQAVALRAKAF-----GF-------NVLFYDPYL----SD----GVERAL---GL----- 211 (347)
T ss_dssp TTTCCCCTTCEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECTTS----CT----THHHHH---TC-----
T ss_pred ccCccCCCCCEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEECCCc----ch----hhHhhc---CC-----
Confidence 01366779999999999999999987643 43 688888631 10 000000 00
Q ss_pred CCCCCHHHHhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 395 REGASLLEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 395 ~~~~~L~e~V~~vkptvLIG~S----~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
....+|.|+++. .|+++=.- ...++++++.++.|. +..++.-.|.=..
T Consensus 212 ~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~mk----~gailIN~arg~~ 263 (347)
T 1mx3_A 212 QRVSTLQDLLFH--SDCVTLHCGLNEHNHHLINDFTVKQMR----QGAFLVNTARGGL 263 (347)
T ss_dssp EECSSHHHHHHH--CSEEEECCCCCTTCTTSBSHHHHTTSC----TTEEEEECSCTTS
T ss_pred eecCCHHHHHhc--CCEEEEcCCCCHHHHHHhHHHHHhcCC----CCCEEEECCCChH
Confidence 011246666665 66665321 113456666666662 3456665554444
No 167
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=84.15 E-value=2.6 Score=43.43 Aligned_cols=124 Identities=19% Similarity=0.172 Sum_probs=68.7
Q ss_pred CCccccCc---chhHHHHHHHHHHHHHHh---------C--------CCCCCCCCceEEEeCccHHHHHHHHHHHHHHHH
Q 011618 289 FCMFNDDI---QGTAGVALAGLLGTVRAQ---------G--------LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAAR 348 (481)
Q Consensus 289 ~~~FNDDi---QGTaaV~LAgll~Alr~~---------g--------~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~ 348 (481)
+.+.|--- +.+|=-+++-+|+..|-. | ....+|.+.+|.|+|.|..|..+|+.+...
T Consensus 137 I~V~n~~g~~~~~VAE~al~liL~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~a~--- 213 (393)
T 2nac_A 137 VTVAEVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGTVAAGRIGLAVLRRLAPF--- 213 (393)
T ss_dssp CEEEECTTTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCCTTCEEEEECCSHHHHHHHHHHGGG---
T ss_pred EEEEeCCCcccHHHHHHHHHHHHHHHhccHHHHHHHHcCCCCccccccCCccCCCCEEEEEeECHHHHHHHHHHHhC---
Confidence 55555221 234555677777776522 1 012345559999999999999999987643
Q ss_pred HcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHHhcccCCcEEEeec----CCCCCCCH
Q 011618 349 MAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFNE 424 (481)
Q Consensus 349 ~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S----~~~g~Ft~ 424 (481)
|+ +++.+|+... .. ..++... .....+|.|+++. .|+++=.- ...++|++
T Consensus 214 --G~-------~V~~~d~~~~--------~~---~~~~~~G----~~~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~ 267 (393)
T 2nac_A 214 --DV-------HLHYTDRHRL--------PE---SVEKELN----LTWHATREDMYPV--CDVVTLNCPLHPETEHMIND 267 (393)
T ss_dssp --TC-------EEEEECSSCC--------CH---HHHHHHT----CEECSSHHHHGGG--CSEEEECSCCCTTTTTCBSH
T ss_pred --CC-------EEEEEcCCcc--------ch---hhHhhcC----ceecCCHHHHHhc--CCEEEEecCCchHHHHHhhH
Confidence 42 6887876421 11 0111000 0011356676665 67666331 11356667
Q ss_pred HHHHHhhhcCCCCCEEEecCC
Q 011618 425 EVLKAMRESDSVKPAIFAMSN 445 (481)
Q Consensus 425 evv~~Ma~~~~erPIIFaLSN 445 (481)
+.+..|. +..+|.-.|.
T Consensus 268 ~~l~~mk----~gailIN~aR 284 (393)
T 2nac_A 268 ETLKLFK----RGAYIVNTAR 284 (393)
T ss_dssp HHHTTSC----TTEEEEECSC
T ss_pred HHHhhCC----CCCEEEECCC
Confidence 7777662 3556665664
No 168
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=84.08 E-value=0.48 Score=46.84 Aligned_cols=116 Identities=13% Similarity=0.200 Sum_probs=69.4
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCC-CCCChhhhccccccCCcCCcCCCCCHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (481)
.||.|+|||+.|..+|-.|.. .|+- ..++++|.+-=...+. .++.+. .+|....-. -..+..+
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~-----~~~~-----~ei~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~-----v~~~~~~ 70 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVN-----QSIV-----DELVIIDLDTEKVRGDVMDLKHA-TPYSPTTVR-----VKAGEYS 70 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----HCSC-----SEEEEECSCHHHHHHHHHHHHHH-GGGSSSCCE-----EEECCGG
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC-----CEEEEEeCChhHhhhhhhhHHhh-hhhcCCCeE-----EEeCCHH
Confidence 699999999999998887653 2431 5799999752000000 122222 233211100 1113477
Q ss_pred HhcccCCcEEEeecCCCCC--------------CCHHHHHHhhhcCCCCCEEEecCCCCCCCCCCCCHHHHHhcc
Q 011618 403 VVRKVKPHVLLGLSGVGGV--------------FNEEVLKAMRESDSVKPAIFAMSNPTMNGLFSCCVTTFFFYL 463 (481)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~~~t~eda~~wt 463 (481)
++++ +|++|=+.+.|.. .=+++++.|.+ ++...+|+-.|||.. ...+-+++.+
T Consensus 71 a~~~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~viv~tNPv~-----~~t~~~~k~~ 137 (317)
T 3d0o_A 71 DCHD--ADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMA-SKFDGIFLVATNPVD-----ILAYATWKFS 137 (317)
T ss_dssp GGTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-TTCCSEEEECSSSHH-----HHHHHHHHHH
T ss_pred HhCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHH-hCCCcEEEEecCcHH-----HHHHHHHHHh
Confidence 7888 8999855554432 12456666654 788999999999987 4455555554
No 169
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=83.97 E-value=3.7 Score=40.47 Aligned_cols=143 Identities=19% Similarity=0.229 Sum_probs=79.7
Q ss_pred hCCce-EEEeecCCCchHHHHHHHHhhcCCcccc-Ccch--hHHHHHHHHHHHHHHh---------C----C-CCCCCCC
Q 011618 262 RWPKA-IVQFEDFQMKWAFETLERYRKRFCMFND-DIQG--TAGVALAGLLGTVRAQ---------G----L-SLTDFAD 323 (481)
Q Consensus 262 ~~P~~-~IqfEDf~~~naf~iL~ryr~~~~~FND-DiQG--TaaV~LAgll~Alr~~---------g----~-~l~dl~~ 323 (481)
..|+. .|+.-=.+..|- .+ +..+..+++.|- +... +|=-+++.+++..|-. | . +..+|.+
T Consensus 47 ~~~~Lk~I~~~~~G~d~i-d~-~~~~~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~l~g 124 (303)
T 1qp8_A 47 KMPRLKFIQVVTAGLDHL-PW-ESIPPHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVEIPLIQG 124 (303)
T ss_dssp HCTTCCCEEBSSSCCTTS-CC-TTSCTTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCSCCCCCTT
T ss_pred hCCCCcEEEECCcCcccc-cH-HHHhcCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCC
Confidence 35665 666444443332 11 112334666663 3333 3334788888877632 1 1 2336777
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
.+|.|+|.|..|..+|+.+... |+ +++.+|++.- . . .. ....+|.|+
T Consensus 125 ~~vgIIG~G~IG~~~A~~l~~~-----G~-------~V~~~dr~~~--~---~------~~----------~~~~~l~el 171 (303)
T 1qp8_A 125 EKVAVLGLGEIGTRVGKILAAL-----GA-------QVRGFSRTPK--E---G------PW----------RFTNSLEEA 171 (303)
T ss_dssp CEEEEESCSTHHHHHHHHHHHT-----TC-------EEEEECSSCC--C---S------SS----------CCBSCSHHH
T ss_pred CEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEECCCcc--c---c------Cc----------ccCCCHHHH
Confidence 9999999999999999988653 43 6888887532 0 0 00 012346666
Q ss_pred hcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCEEEecCC
Q 011618 404 VRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (481)
Q Consensus 404 V~~vkptvLIG~S----~~~g~Ft~evv~~Ma~~~~erPIIFaLSN 445 (481)
++. .|+++=.- ...+.++++.++.|. +..++.=.|.
T Consensus 172 l~~--aDvV~l~~P~~~~t~~~i~~~~l~~mk----~gailin~sr 211 (303)
T 1qp8_A 172 LRE--ARAAVCALPLNKHTRGLVKYQHLALMA----EDAVFVNVGR 211 (303)
T ss_dssp HTT--CSEEEECCCCSTTTTTCBCHHHHTTSC----TTCEEEECSC
T ss_pred Hhh--CCEEEEeCcCchHHHHHhCHHHHhhCC----CCCEEEECCC
Confidence 665 66665332 113456666666662 4556665554
No 170
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=83.87 E-value=0.5 Score=49.34 Aligned_cols=103 Identities=15% Similarity=0.125 Sum_probs=63.5
Q ss_pred hHHHHHHHHHHhCCceEEEeecCCCchHHHHHHHHhhc-CCcc--ccCcchhHHHHHHHHHHHHHHhCC-----CCCCCC
Q 011618 251 IVDEFMEAVHARWPKAIVQFEDFQMKWAFETLERYRKR-FCMF--NDDIQGTAGVALAGLLGTVRAQGL-----SLTDFA 322 (481)
Q Consensus 251 ~vdefv~av~~~~P~~~IqfEDf~~~naf~iL~ryr~~-~~~F--NDDiQGTaaV~LAgll~Alr~~g~-----~l~dl~ 322 (481)
.+..+++.+...+|++-+.--|. ..-.++-++|.-. +|++ |+..-+.++....-+...+..... ++.+-.
T Consensus 134 ~~~~~l~~~a~~~~~v~~~~vd~--~~~~~~~~~~~i~svPt~~i~g~~~~~G~~~~~~l~~~l~~~~~~~~~~~~~~~~ 211 (521)
T 1hyu_A 134 DVVQALNLMAVLNPRIKHTAIDG--GTFQNEITERNVMGVPAVFVNGKEFGQGRMTLTEIVAKVDTGAEKRAAEALNKRD 211 (521)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEET--TTCHHHHHHTTCCSSSEEEETTEEEEESCCCHHHHHHHHCCSSCCHHHHHHHTSC
T ss_pred HHHHHHHHHHhHcCceEEEEEec--hhhHHHHHHhCCCccCEEEECCEEEecCCCCHHHHHHHHhhcccccccccccccC
Confidence 45566666667788643333344 3445678888643 6644 666667777776777765432210 011111
Q ss_pred CceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
..+|+|+|||.||+..|..+.. .|+ ++.++|++
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~-----~G~-------~v~lie~~ 244 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSAR-----KGI-------RTGLMGER 244 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cccEEEECCcHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 2689999999999999988754 353 56677653
No 171
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=83.73 E-value=2.8 Score=41.06 Aligned_cols=89 Identities=16% Similarity=0.196 Sum_probs=53.7
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccC-CcCCcCCCCCHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPG-DFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~-~~~~~~~~~~L~e 402 (481)
.+|.|+|+|..|..++..+... .|. ++++++|+. . +..+.|++... .. ....++.|
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~----~g~------~~V~v~dr~----~------~~~~~l~~~~~~~~---~~~~~~~e 192 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQ----FSF------KEVRIWNRT----K------ENAEKFADTVQGEV---RVCSSVQE 192 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----CCC------SEEEEECSS----H------HHHHHHHHHSSSCC---EECSSHHH
T ss_pred cEEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----H------HHHHHHHHHhhCCe---EEeCCHHH
Confidence 7999999999999998887653 243 478888762 1 11122332211 01 12457999
Q ss_pred HhcccCCcEEEeecCC-CCCCCHHHHHHhhhcCCCCCEEEecC
Q 011618 403 VVRKVKPHVLLGLSGV-GGVFNEEVLKAMRESDSVKPAIFAMS 444 (481)
Q Consensus 403 ~V~~vkptvLIG~S~~-~g~Ft~evv~~Ma~~~~erPIIFaLS 444 (481)
+++. +|++|=+... ..+|.+ .. ..+..+|+.+|
T Consensus 193 ~v~~--aDiVi~atp~~~~v~~~---~~----l~~g~~vi~~g 226 (312)
T 2i99_A 193 AVAG--ADVIITVTLATEPILFG---EW----VKPGAHINAVG 226 (312)
T ss_dssp HHTT--CSEEEECCCCSSCCBCG---GG----SCTTCEEEECC
T ss_pred HHhc--CCEEEEEeCCCCcccCH---HH----cCCCcEEEeCC
Confidence 9987 8998855432 123333 12 23566888885
No 172
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=83.62 E-value=0.44 Score=45.99 Aligned_cols=106 Identities=16% Similarity=0.213 Sum_probs=59.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecC-CCCCChhhhccccccCCcCCcCCCCCHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (481)
.||.|+|||+.|..+|..|.. .|.- ..++++|++---... .-++. +...+..+. .. ....+ .+
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~-----~g~~-----~~V~l~d~~~~~~~~~~~~~~-~~~~~~~~~-~v---~~~~~-~~ 71 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQ-----RGIA-----REIVLEDIAKERVEAEVLDMQ-HGSSFYPTV-SI---DGSDD-PE 71 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEECSSHHHHHHHHHHHH-HTGGGSTTC-EE---EEESC-GG
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC-----CEEEEEeCChhHHHHHHHHHH-hhhhhcCCe-EE---EeCCC-HH
Confidence 689999999999999987754 3431 379999985310000 00000 001111110 00 00113 35
Q ss_pred HhcccCCcEEEeecCCCCCC--------------CHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 403 VVRKVKPHVLLGLSGVGGVF--------------NEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~F--------------t~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
+++. +|++|=+.+.+..- -+++++.|++ ++...+|+.++||..
T Consensus 72 ~~~~--aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~-~~~~~~vi~~~Np~~ 128 (319)
T 1lld_A 72 ICRD--ADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVK-VAPNAIYMLITNPVD 128 (319)
T ss_dssp GGTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCTTSEEEECCSSHH
T ss_pred HhCC--CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCceEEEecCchH
Confidence 5665 89888444333211 1178888865 577888989999987
No 173
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=83.60 E-value=0.84 Score=46.17 Aligned_cols=118 Identities=14% Similarity=0.224 Sum_probs=68.3
Q ss_pred CCCceEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecC-CCCCChhhhccccccCCcCCcCCCC
Q 011618 321 FADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGA 398 (481)
Q Consensus 321 l~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~l~~~k~~fA~~~~~~~~~~~~~ 398 (481)
+...||.|+|| |..|..+|..++. .|+. ..+.++|.+-=..++ ..+|.+. .|.. ... ....
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~-----~g~~-----~evvLiDi~~~k~~g~a~DL~~~--~~~~--~~i---~~t~ 68 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAM-----MRLT-----PNLCLYDPFAVGLEGVAEEIRHC--GFEG--LNL---TFTS 68 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHH-----TTCC-----SCEEEECSCHHHHHHHHHHHHHH--CCTT--CCC---EEES
T ss_pred cCCCEEEEECCCChHHHHHHHHHHh-----cCCC-----CEEEEEeCCchhHHHHHHhhhhC--cCCC--Cce---EEcC
Confidence 44589999998 9999999865543 4552 369999973110000 0123222 2211 111 1235
Q ss_pred CHHHHhcccCCcEEEeecCC---CCC-----------CCHHHHHHhhhcCCCCCE-EEecCCCCCCCCCCCCHHHHHhcc
Q 011618 399 SLLEVVRKVKPHVLLGLSGV---GGV-----------FNEEVLKAMRESDSVKPA-IFAMSNPTMNGLFSCCVTTFFFYL 463 (481)
Q Consensus 399 ~L~e~V~~vkptvLIG~S~~---~g~-----------Ft~evv~~Ma~~~~erPI-IFaLSNPt~~aE~~~t~eda~~wt 463 (481)
++.+++++ +|++|=+.+. +|- .-+++++.+.+ ++..-+ |+-.|||.. ....-+++.+
T Consensus 69 d~~~al~d--ADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~-~~p~a~~vlvvsNPvd-----~~t~i~~k~s 140 (343)
T 3fi9_A 69 DIKEALTD--AKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKS-YCPDCKHVIIIFNPAD-----ITGLVTLIYS 140 (343)
T ss_dssp CHHHHHTT--EEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHH-HCTTCCEEEECSSSHH-----HHHHHHHHHH
T ss_pred CHHHHhCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hccCcEEEEEecCchH-----HHHHHHHHHc
Confidence 78899998 8998844443 331 23455666654 777775 788999976 4444555554
No 174
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=83.58 E-value=0.68 Score=43.55 Aligned_cols=29 Identities=14% Similarity=0.306 Sum_probs=23.3
Q ss_pred eEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
||.|+|+|..|..+|..+.. |. +++++|+
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~------g~-------~V~~~~~ 31 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR------RF-------PTLVWNR 31 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT------TS-------CEEEECS
T ss_pred eEEEEcccHHHHHHHHHHhC------CC-------eEEEEeC
Confidence 79999999999999988753 42 5777776
No 175
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=83.48 E-value=0.75 Score=44.69 Aligned_cols=33 Identities=15% Similarity=0.437 Sum_probs=26.4
Q ss_pred CceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
..||.|+|+|..|.++|..|... |. +++++|++
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 41 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQ-----GK-------RVAIWNRS 41 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 37999999999999999988753 53 57777763
No 176
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=83.27 E-value=1.2 Score=42.89 Aligned_cols=94 Identities=14% Similarity=0.123 Sum_probs=54.8
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
.||.|+|+|..|.++|..+... |. +++++|++ . +.+...+. .. .....++.|+
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~----~--~~~~~~~~----~g-----~~~~~~~~~~ 68 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEW-----PG-------GVTVYDIR----I--EAMTPLAE----AG-----ATLADSVADV 68 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTS-----TT-------CEEEECSS----T--TTSHHHHH----TT-----CEECSSHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEeCC----H--HHHHHHHH----CC-----CEEcCCHHHH
Confidence 5899999999999999987653 43 57777763 1 12222211 11 0123568887
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 404 V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
++ +|++| ++.....-.+++++.+.+...+.-||.-.|+-.+
T Consensus 69 ~~---aDvvi-~~vp~~~~~~~v~~~l~~~l~~g~ivv~~st~~~ 109 (296)
T 3qha_A 69 AA---ADLIH-ITVLDDAQVREVVGELAGHAKPGTVIAIHSTISD 109 (296)
T ss_dssp TT---SSEEE-ECCSSHHHHHHHHHHHHTTCCTTCEEEECSCCCH
T ss_pred Hh---CCEEE-EECCChHHHHHHHHHHHHhcCCCCEEEEeCCCCH
Confidence 76 67776 2221133445666666543345567776775433
No 177
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=83.10 E-value=0.76 Score=43.63 Aligned_cols=95 Identities=17% Similarity=0.207 Sum_probs=51.4
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
.||.|+|+|..|..+|..+... |. +++++|++. +....+++.. .....++.|+
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~~----------~~~~~~~~~g-----~~~~~~~~~~ 58 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA-----GY-------SLVVSDRNP----------EAIADVIAAG-----AETASTAKAI 58 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSCH----------HHHHHHHHTT-----CEECSSHHHH
T ss_pred ceEEEECchHHHHHHHHHHHhC-----CC-------EEEEEeCCH----------HHHHHHHHCC-----CeecCCHHHH
Confidence 3899999999999999887643 42 578887631 1111111110 0113457777
Q ss_pred hcccCCcEEEeecCCCCCCCHHHH---HHhhhcCCCCCEEEecCCCCC
Q 011618 404 VRKVKPHVLLGLSGVGGVFNEEVL---KAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 404 V~~vkptvLIG~S~~~g~Ft~evv---~~Ma~~~~erPIIFaLSNPt~ 448 (481)
++. +|++|=+.. ...-.++++ +.+.+...+..+|.-+||-.+
T Consensus 59 ~~~--~D~vi~~v~-~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~ 103 (299)
T 1vpd_A 59 AEQ--CDVIITMLP-NSPHVKEVALGENGIIEGAKPGTVLIDMSSIAP 103 (299)
T ss_dssp HHH--CSEEEECCS-SHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCH
T ss_pred HhC--CCEEEEECC-CHHHHHHHHhCcchHhhcCCCCCEEEECCCCCH
Confidence 776 777763321 122234444 222221234556666776554
No 178
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=82.90 E-value=6.6 Score=39.04 Aligned_cols=125 Identities=18% Similarity=0.122 Sum_probs=79.7
Q ss_pred cCCccccCcc---hhHHHHHHHHHHHHHHh---------C------CCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHH
Q 011618 288 RFCMFNDDIQ---GTAGVALAGLLGTVRAQ---------G------LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARM 349 (481)
Q Consensus 288 ~~~~FNDDiQ---GTaaV~LAgll~Alr~~---------g------~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~ 349 (481)
-+.+.|---- .+|=-+++.+++..|-. | ..-.+|.+.+|.|+|.|..|..+|+.+...
T Consensus 93 gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~---- 168 (333)
T 1j4a_A 93 GFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQVFMQIMEGF---- 168 (333)
T ss_dssp TCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHHHHHHHHHT----
T ss_pred CCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEEccCHHHHHHHHHHHHC----
Confidence 4767664332 34445788888887721 2 112356669999999999999999988753
Q ss_pred cCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHHhcccCCcEEEeecC----CCCCCCHH
Q 011618 350 AGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG----VGGVFNEE 425 (481)
Q Consensus 350 ~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~----~~g~Ft~e 425 (481)
|+ +++.+|+.. ... .+ .++. ...+|.|+++. .|+++=.-. ..++++++
T Consensus 169 -G~-------~V~~~d~~~------~~~--~~-~~~~---------~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~ 220 (333)
T 1j4a_A 169 -GA-------KVITYDIFR------NPE--LE-KKGY---------YVDSLDDLYKQ--ADVISLHVPDVPANVHMINDE 220 (333)
T ss_dssp -TC-------EEEEECSSC------CHH--HH-HTTC---------BCSCHHHHHHH--CSEEEECSCCCGGGTTCBSHH
T ss_pred -CC-------EEEEECCCc------chh--HH-hhCe---------ecCCHHHHHhh--CCEEEEcCCCcHHHHHHHhHH
Confidence 43 688888742 100 11 1211 11268888887 888884421 23678888
Q ss_pred HHHHhhhcCCCCCEEEecCCCCC
Q 011618 426 VLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 426 vv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
.++.|. +..++.-.|.-..
T Consensus 221 ~l~~mk----~ga~lIn~arg~~ 239 (333)
T 1j4a_A 221 SIAKMK----QDVVIVNVSRGPL 239 (333)
T ss_dssp HHHHSC----TTEEEEECSCGGG
T ss_pred HHhhCC----CCcEEEECCCCcc
Confidence 999883 5678777776444
No 179
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=82.78 E-value=0.42 Score=47.63 Aligned_cols=116 Identities=18% Similarity=0.246 Sum_probs=68.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc--eeecCC-CCCChhhhccccccCCcCCcCCCCCH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG--LITKER-KNLDPAAAPFAKDPGDFMGLREGASL 400 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G--Li~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L 400 (481)
.||.|+|||..|.++|..+.. .|+ ..+.++|.+- -..++. .++.+. .++........ ...+
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~-----~g~------~~v~l~D~~~~~~~~~g~a~dl~~~-~~~~~~~~~i~---~t~d- 72 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQ-----KEL------ADVVLVDIPQLENPTKGKALDMLEA-SPVQGFDANII---GTSD- 72 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------CEEEEECCGGGHHHHHHHHHHHHHH-HHHHTCCCCEE---EESC-
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEeccchHHHHHHhhhhHHHh-hhhccCCCEEE---EcCC-
Confidence 799999999999999988765 354 2799999861 111111 122221 13322111110 1122
Q ss_pred HHHhcccCCcEEEeecCC---CCC-----C------CHHHHHHhhhcCCCCCEEEecCCCCCCCCCCCCHHHHHhcc
Q 011618 401 LEVVRKVKPHVLLGLSGV---GGV-----F------NEEVLKAMRESDSVKPAIFAMSNPTMNGLFSCCVTTFFFYL 463 (481)
Q Consensus 401 ~e~V~~vkptvLIG~S~~---~g~-----F------t~evv~~Ma~~~~erPIIFaLSNPt~~aE~~~t~eda~~wt 463 (481)
.+++++ .|++|=+.+. ||- | -+++++.+++ ++...+|+-.|||.. ....-+++.+
T Consensus 73 ~~a~~~--aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~-~~p~a~vlvvsNPvd-----~~t~~~~k~s 141 (315)
T 3tl2_A 73 YADTAD--SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAK-HSPNAIIVVLTNPVD-----AMTYSVFKEA 141 (315)
T ss_dssp GGGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECCSSHH-----HHHHHHHHHH
T ss_pred HHHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCeEEEECCChHH-----HHHHHHHHhc
Confidence 467777 8988755443 331 2 2567777754 788889999999987 4444455543
No 180
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=82.78 E-value=8.2 Score=38.92 Aligned_cols=123 Identities=14% Similarity=0.181 Sum_probs=79.9
Q ss_pred CCccccCc---chhHHHHHHHHHHHHHH----------hCC-------CCCCCCCceEEEeCccHHHHHHHHHHHHHHHH
Q 011618 289 FCMFNDDI---QGTAGVALAGLLGTVRA----------QGL-------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAAR 348 (481)
Q Consensus 289 ~~~FNDDi---QGTaaV~LAgll~Alr~----------~g~-------~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~ 348 (481)
|.+.|--- +.+|=-+++-+++..|- .|. .-.+|.+.+|.|+|.|..|..+|+.+...
T Consensus 94 I~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~--- 170 (343)
T 2yq5_A 94 LLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIGSAVAEIFSAM--- 170 (343)
T ss_dssp CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT---
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHHHHHHHHHhhC---
Confidence 55655422 23455668888877762 221 12356669999999999999999988754
Q ss_pred HcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHHhcccCCcEEEeecC----CCCCCCH
Q 011618 349 MAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG----VGGVFNE 424 (481)
Q Consensus 349 ~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~----~~g~Ft~ 424 (481)
|+ +++.+|+..- .. ... . ....+|.|+++. .|+++=.-- ..+.|++
T Consensus 171 --G~-------~V~~~d~~~~---------~~---~~~-~------~~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~ 220 (343)
T 2yq5_A 171 --GA-------KVIAYDVAYN---------PE---FEP-F------LTYTDFDTVLKE--ADIVSLHTPLFPSTENMIGE 220 (343)
T ss_dssp --TC-------EEEEECSSCC---------GG---GTT-T------CEECCHHHHHHH--CSEEEECCCCCTTTTTCBCH
T ss_pred --CC-------EEEEECCChh---------hh---hhc-c------ccccCHHHHHhc--CCEEEEcCCCCHHHHHHhhH
Confidence 43 6888887520 10 000 0 012379999987 898885432 2478999
Q ss_pred HHHHHhhhcCCCCCEEEecCCCCC
Q 011618 425 EVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 425 evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
+.+..|. +..++.=.|.-..
T Consensus 221 ~~l~~mk----~gailIN~aRg~~ 240 (343)
T 2yq5_A 221 KQLKEMK----KSAYLINCARGEL 240 (343)
T ss_dssp HHHHHSC----TTCEEEECSCGGG
T ss_pred HHHhhCC----CCcEEEECCCChh
Confidence 9999993 5778887775544
No 181
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=82.63 E-value=0.51 Score=49.26 Aligned_cols=34 Identities=29% Similarity=0.491 Sum_probs=29.8
Q ss_pred CceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
+.||+|+|||..|..+|+.|+.+++ .+|.++|.+
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGv-----------g~i~ivD~D 73 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGF-----------RQIHVIDMD 73 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTC-----------CCEEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCC-----------CEEEEEcCC
Confidence 3899999999999999999987644 689999986
No 182
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=82.62 E-value=0.82 Score=45.80 Aligned_cols=116 Identities=17% Similarity=0.275 Sum_probs=66.4
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCC-CCCChhhhccccccCCcCCcCCCCCHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (481)
.||.|+|||..|.++|..|.. .|+. .+.++|.+-=..++. .+|.+.. .|....... ....+. +
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~-----~~~~------~v~L~Di~~~~~~g~~~dl~~~~-~~~~~~~~v---~~t~d~-~ 71 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGL-----KELG------DVVLFDIAEGTPQGKGLDIAESS-PVDGFDAKF---TGANDY-A 71 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC------EEEEECSSSSHHHHHHHHHHHHH-HHHTCCCCE---EEESSG-G
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC------eEEEEeCCchhHHHHHHHHhchh-hhcCCCCEE---EEeCCH-H
Confidence 799999999999999888764 3541 599999742110000 0122211 122111111 012344 7
Q ss_pred HhcccCCcEEEeecCC---CCC-----C--C----HHHHHHhhhcCCCCCEEEecCCCCCCCCCCCCHHHHHhcc
Q 011618 403 VVRKVKPHVLLGLSGV---GGV-----F--N----EEVLKAMRESDSVKPAIFAMSNPTMNGLFSCCVTTFFFYL 463 (481)
Q Consensus 403 ~V~~vkptvLIG~S~~---~g~-----F--t----~evv~~Ma~~~~erPIIFaLSNPt~~aE~~~t~eda~~wt 463 (481)
++++ +|++|=+.+. ||- | + +++++.|.+ ++...+|+-.|||.. ....-+++.+
T Consensus 72 a~~~--aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~-~~p~a~iivvtNPvd-----~~t~~~~k~s 138 (324)
T 3gvi_A 72 AIEG--ADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKK-YAPEAFVICITNPLD-----AMVWALQKFS 138 (324)
T ss_dssp GGTT--CSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHH-HCTTCEEEECCSSHH-----HHHHHHHHHH
T ss_pred HHCC--CCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHH-HCCCeEEEecCCCcH-----HHHHHHHHhc
Confidence 8888 8988754443 342 2 2 456667754 788889999999987 3334455443
No 183
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=82.47 E-value=3.1 Score=41.38 Aligned_cols=92 Identities=14% Similarity=0.059 Sum_probs=58.2
Q ss_pred Cce-EEEeecCCCchHHH-HHH---HHhhcCCccc--cC--cchhHHHHHHHHHHHHHHh---------C----CCCCCC
Q 011618 264 PKA-IVQFEDFQMKWAFE-TLE---RYRKRFCMFN--DD--IQGTAGVALAGLLGTVRAQ---------G----LSLTDF 321 (481)
Q Consensus 264 P~~-~IqfEDf~~~naf~-iL~---ryr~~~~~FN--DD--iQGTaaV~LAgll~Alr~~---------g----~~l~dl 321 (481)
|+. .|+.-=.+..|-.. +-. -....+++.| +- -+.+|=-+++.+++..|-. | .+..+|
T Consensus 58 ~~Lk~I~~~~aG~d~i~d~~~a~~~~~~~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l 137 (315)
T 3pp8_A 58 RRLKAVFVLGAGVDAILSKLNAHPEMLDASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTR 137 (315)
T ss_dssp CCCSEEEESSSCCHHHHHHHHHCTTSSCTTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCS
T ss_pred CCceEEEECCEecccccchhhhhhhhhcCCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCCCCCCc
Confidence 776 77766666555323 221 1223466655 22 1455666788888887631 1 123456
Q ss_pred CCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 322 ~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+.+|.|+|.|..|..+|+.+... |+ +++.+|+.
T Consensus 138 ~g~tvGIiG~G~IG~~vA~~l~~~-----G~-------~V~~~dr~ 171 (315)
T 3pp8_A 138 EEFSVGIMGAGVLGAKVAESLQAW-----GF-------PLRCWSRS 171 (315)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTT-----TC-------CEEEEESS
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEcCC
Confidence 669999999999999999988653 43 68888874
No 184
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=82.40 E-value=1.3 Score=42.51 Aligned_cols=95 Identities=17% Similarity=0.241 Sum_probs=53.8
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
.||.|+|+|..|..+|..+.. .|. +++++|++. +.+.. ++...- ....++.|+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~-----~g~-------~V~~~~~~~------~~~~~----~~~~g~-----~~~~~~~~~ 83 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLK-----MGH-------TVTVWNRTA------EKCDL----FIQEGA-----RLGRTPAEV 83 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSG------GGGHH----HHHTTC-----EECSCHHHH
T ss_pred CeEEEEcccHHHHHHHHHHHh-----CCC-------EEEEEeCCH------HHHHH----HHHcCC-----EEcCCHHHH
Confidence 589999999999999988764 343 577787631 11111 111100 113467788
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhh---hcCCCCCEEEecCCCCC
Q 011618 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMR---ESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 404 V~~vkptvLIG~S~~~g~Ft~evv~~Ma---~~~~erPIIFaLSNPt~ 448 (481)
++. +|++|=+.. ...-.++++.... +...+..+|+-+||-.+
T Consensus 84 ~~~--~DvVi~av~-~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~ 128 (316)
T 2uyy_A 84 VST--CDITFACVS-DPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDA 128 (316)
T ss_dssp HHH--CSEEEECCS-SHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCH
T ss_pred Hhc--CCEEEEeCC-CHHHHHHHHcCchhHhhcCCCCCEEEECCCCCH
Confidence 876 787773321 1233455554321 22345567777887443
No 185
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=82.25 E-value=0.45 Score=47.49 Aligned_cols=116 Identities=16% Similarity=0.236 Sum_probs=67.1
Q ss_pred eEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCC-CCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
||.|+|||..|.++|..|... |+- ..+.++|.+-=..++. .+|.+.. .+....... ...+..++
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~-----~~~-----~el~l~D~~~~k~~g~a~DL~~~~-~~~~~~~~v----~~~~~~~a 66 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ-----DVA-----KEVVMVDIKDGMPQGKALDMRESS-PIHGFDTRV----TGTNDYGP 66 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TCS-----SEEEEECSSTTHHHHHHHHHHHHH-HHHTCCCEE----EEESSSGG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CCC-----CEEEEEeCchHHHHHHHHHHhccc-cccCCCcEE----EECCCHHH
Confidence 799999999999999988754 431 4799999853111000 0122111 111111000 01134677
Q ss_pred hcccCCcEEEeecCC---CCC-----------CCHHHHHHhhhcCCCCCEEEecCCCCCCCCCCCCHHHHHhcc
Q 011618 404 VRKVKPHVLLGLSGV---GGV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNGLFSCCVTTFFFYL 463 (481)
Q Consensus 404 V~~vkptvLIG~S~~---~g~-----------Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~~~t~eda~~wt 463 (481)
+++ +|++|=+.+. ||- .-+++++.+.+ ++...+|+-.|||.. ....-+++.+
T Consensus 67 ~~~--aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~-~~p~a~vivvtNPvd-----~~t~~~~k~~ 132 (314)
T 3nep_X 67 TED--SDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVE-GSPDSTIIVVANPLD-----VMTYVAYEAS 132 (314)
T ss_dssp GTT--CSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHT-TCTTCEEEECCSSHH-----HHHHHHHHHH
T ss_pred hCC--CCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHH-hCCCcEEEecCCchh-----HHHHHHHHhc
Confidence 888 8988744443 332 12456667754 899999999999987 4444555543
No 186
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=82.22 E-value=1.8 Score=40.83 Aligned_cols=34 Identities=26% Similarity=0.411 Sum_probs=26.3
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.||.|+|+|..|..+|..+.. .|.. .+++++|++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~-----~g~~-----~~V~~~d~~ 35 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRR-----SGFK-----GKIYGYDIN 35 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHH-----TTCC-----SEEEEECSC
T ss_pred cEEEEEecCHHHHHHHHHHHh-----cCCC-----cEEEEEeCC
Confidence 479999999999999988764 3531 368888864
No 187
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=82.10 E-value=0.77 Score=44.32 Aligned_cols=32 Identities=19% Similarity=0.352 Sum_probs=25.2
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
-||+|+|||.||+..|..|.. .|+ ++.++|+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~-----~G~-------~v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRK-----HGI-------KVTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEecC
Confidence 489999999999999988765 464 46677653
No 188
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=82.05 E-value=7.2 Score=38.79 Aligned_cols=124 Identities=19% Similarity=0.194 Sum_probs=78.4
Q ss_pred cCCccccCcch---hHHHHHHHHHHHHHH----------------hCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHH
Q 011618 288 RFCMFNDDIQG---TAGVALAGLLGTVRA----------------QGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAAR 348 (481)
Q Consensus 288 ~~~~FNDDiQG---TaaV~LAgll~Alr~----------------~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~ 348 (481)
-+.+.|=--.. +|=-+++.+++..|- .+..-.+|.+.+|.|+|.|..|..+|+.+...
T Consensus 91 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~--- 167 (333)
T 1dxy_A 91 GIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVAIKLFKGF--- 167 (333)
T ss_dssp TCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEEECcCHHHHHHHHHHHHC---
Confidence 36666643233 344468888877661 11122456669999999999999999988754
Q ss_pred HcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHHhcccCCcEEEeecC----CCCCCCH
Q 011618 349 MAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG----VGGVFNE 424 (481)
Q Consensus 349 ~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~----~~g~Ft~ 424 (481)
|+ +++.+|+.. .. ... .++ ...+|.|+++. .|+++=.-. ..++|++
T Consensus 168 --G~-------~V~~~d~~~----~~-~~~----~~~----------~~~~l~ell~~--aDvV~~~~P~~~~t~~li~~ 217 (333)
T 1dxy_A 168 --GA-------KVIAYDPYP----MK-GDH----PDF----------DYVSLEDLFKQ--SDVIDLHVPGIEQNTHIINE 217 (333)
T ss_dssp --TC-------EEEEECSSC----CS-SCC----TTC----------EECCHHHHHHH--CSEEEECCCCCGGGTTSBCH
T ss_pred --CC-------EEEEECCCc----ch-hhH----hcc----------ccCCHHHHHhc--CCEEEEcCCCchhHHHHhCH
Confidence 43 688888742 11 111 111 12368888887 788874421 1367888
Q ss_pred HHHHHhhhcCCCCCEEEecCCCCC
Q 011618 425 EVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 425 evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
+.++.|. +..++.=.|.-..
T Consensus 218 ~~l~~mk----~ga~lIn~srg~~ 237 (333)
T 1dxy_A 218 AAFNLMK----PGAIVINTARPNL 237 (333)
T ss_dssp HHHHHSC----TTEEEEECSCTTS
T ss_pred HHHhhCC----CCcEEEECCCCcc
Confidence 8999883 4667777776444
No 189
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=81.62 E-value=1.7 Score=40.80 Aligned_cols=31 Identities=26% Similarity=0.324 Sum_probs=24.9
Q ss_pred eEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
||.|+|+|..|..+|..+... |. +++++|++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR-----GH-------YLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHC-----CC-------EEEEEECC
Confidence 799999999999999887643 42 58888864
No 190
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=81.57 E-value=3 Score=36.28 Aligned_cols=98 Identities=27% Similarity=0.344 Sum_probs=56.8
Q ss_pred ceEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHH
Q 011618 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (481)
.+|+|.|| |-.|..+++.|.+ .| .+++.++++.- ....+......+..- + ..+..++.+
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~-----~g-------~~V~~~~r~~~---~~~~~~~~~~~~~~~--D---~~~~~~~~~ 63 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQ-----AG-------YEVTVLVRDSS---RLPSEGPRPAHVVVG--D---VLQAADVDK 63 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEESCGG---GSCSSSCCCSEEEES--C---TTSHHHHHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHH-----CC-------CeEEEEEeChh---hcccccCCceEEEEe--c---CCCHHHHHH
Confidence 68999998 8888888877764 34 36888887521 001110001111110 0 112345888
Q ss_pred HhcccCCcEEEeecCCCCC---------CCHHHHHHhhhcCCCCCEEEecC
Q 011618 403 VVRKVKPHVLLGLSGVGGV---------FNEEVLKAMRESDSVKPAIFAMS 444 (481)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~---------Ft~evv~~Ma~~~~erPIIFaLS 444 (481)
+++. +|++|=+.+.... -+..++++|.+ ..-+.|||.=|
T Consensus 64 ~~~~--~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~-~~~~~~v~~Ss 111 (206)
T 1hdo_A 64 TVAG--QDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKA-HGVDKVVACTS 111 (206)
T ss_dssp HHTT--CSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHH-HTCCEEEEECC
T ss_pred HHcC--CCEEEECccCCCCCCccchHHHHHHHHHHHHHH-hCCCeEEEEee
Confidence 8887 8999987764331 25677888854 34456887443
No 191
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=81.33 E-value=1.1 Score=44.36 Aligned_cols=117 Identities=17% Similarity=0.218 Sum_probs=69.5
Q ss_pred eEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCC-CCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
||.|+|||..|..+|-+|... |+- ..+.|+|..-=...+- -+|.+.. .|....... ...+-.++
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~-----~~~-----~el~L~Di~~~~~~G~a~DL~h~~-~~~~~~~~i----~~~~d~~~ 66 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLN-----LDV-----DEIALVDIAEDLAVGEAMDLAHAA-AGIDKYPKI----VGGADYSL 66 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SCC-----SEEEEECSSHHHHHHHHHHHHHHH-GGGTCCCEE----EEESCGGG
T ss_pred EEEEECcCHHHHHHHHHHHhC-----CCC-----CEEEEEeCCCCcchhhhhhhhccc-ccCCCCCeE----ecCCCHHH
Confidence 899999999999999887653 432 4699999742111111 1333322 121111110 01122356
Q ss_pred hcccCCcEEEeecCCC---CC-----C--C----HHHHHHhhhcCCCCCEEEecCCCCCCCCCCCCHHHHHhccc
Q 011618 404 VRKVKPHVLLGLSGVG---GV-----F--N----EEVLKAMRESDSVKPAIFAMSNPTMNGLFSCCVTTFFFYLM 464 (481)
Q Consensus 404 V~~vkptvLIG~S~~~---g~-----F--t----~evv~~Ma~~~~erPIIFaLSNPt~~aE~~~t~eda~~wt~ 464 (481)
+++ .|++|=+.+.| |- | + +++++++++ ++.+.||.-.|||.. .+.--+++.+.
T Consensus 67 ~~~--aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~-~~p~aivlvvsNPvd-----~~t~i~~k~sg 133 (294)
T 2x0j_A 67 LKG--SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVE-NAPESKILVVTNPMD-----VMTYIMWKESG 133 (294)
T ss_dssp GTT--CSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHT-TSTTCEEEECSSSHH-----HHHHHHHHHSS
T ss_pred hCC--CCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHh-cCCceEEEEecCcch-----hhHHhhHHHcC
Confidence 777 89998666544 42 1 1 356666654 899999999999987 44555666553
No 192
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=81.25 E-value=6.6 Score=39.28 Aligned_cols=36 Identities=22% Similarity=0.261 Sum_probs=28.8
Q ss_pred CCCCceEEEeCccHHHHHHHHHHH-HHHHHHcCCChhhhcCeEEEEecc
Q 011618 320 DFADQKIVVVGAGSAGLGVLKMAV-QAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 320 dl~~~riv~~GAGsAg~GiA~ll~-~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
+|.+.+|.|+|.|..|..+|+.+. .. |+ +++.+|++
T Consensus 160 ~l~g~~vgIIG~G~IG~~vA~~l~~~~-----G~-------~V~~~d~~ 196 (348)
T 2w2k_A 160 NPRGHVLGAVGLGAIQKEIARKAVHGL-----GM-------KLVYYDVA 196 (348)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTT-----CC-------EEEEECSS
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHhc-----CC-------EEEEECCC
Confidence 455599999999999999999876 32 43 68888874
No 193
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=81.17 E-value=1.2 Score=42.15 Aligned_cols=93 Identities=16% Similarity=0.116 Sum_probs=52.5
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
.||.|+|+|..|..+|..+... |. +++++| +. +...... +.. .....++.|+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~-~~------~~~~~~~----~~g-----~~~~~~~~~~ 55 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARA-----GH-------QLHVTT-IG------PVADELL----SLG-----AVNVETARQV 55 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHT-----TC-------EEEECC-SS------CCCHHHH----TTT-----CBCCSSHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHhC-----CC-------EEEEEc-CH------HHHHHHH----HcC-----CcccCCHHHH
Confidence 4899999999999999887643 42 577666 31 1122111 110 0123467888
Q ss_pred hcccCCcEEEeecCCCCCC-CHHHHH---HhhhcCCCCCEEEecCCCCC
Q 011618 404 VRKVKPHVLLGLSGVGGVF-NEEVLK---AMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 404 V~~vkptvLIG~S~~~g~F-t~evv~---~Ma~~~~erPIIFaLSNPt~ 448 (481)
++. +|++|=+. |... .++++. .+.+...+..+|+-+||-.+
T Consensus 56 ~~~--~D~vi~~v--p~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~ 100 (295)
T 1yb4_A 56 TEF--ADIIFIMV--PDTPQVEDVLFGEHGCAKTSLQGKTIVDMSSISP 100 (295)
T ss_dssp HHT--CSEEEECC--SSHHHHHHHHHSTTSSTTSCCTTEEEEECSCCCH
T ss_pred Hhc--CCEEEEEC--CCHHHHHHHHhCchhHhhcCCCCCEEEECCCCCH
Confidence 876 78777332 2222 455555 33222234557777777643
No 194
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=81.14 E-value=3.6 Score=41.14 Aligned_cols=149 Identities=15% Similarity=0.173 Sum_probs=88.8
Q ss_pred hCCce-EEEeecCCCchHHHHHHHHh-hcCCcccc-Cc--chhHHHHHHHHHHHHHHh---------C-------CCCCC
Q 011618 262 RWPKA-IVQFEDFQMKWAFETLERYR-KRFCMFND-DI--QGTAGVALAGLLGTVRAQ---------G-------LSLTD 320 (481)
Q Consensus 262 ~~P~~-~IqfEDf~~~naf~iL~ryr-~~~~~FND-Di--QGTaaV~LAgll~Alr~~---------g-------~~l~d 320 (481)
..|+. .|+.--.+..|- . ++..+ .-+++.|= +. ..+|=-+++-+++..|-. | ..-.+
T Consensus 61 ~~~~Lk~I~~~~~G~d~i-d-~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~ 138 (334)
T 2pi1_A 61 KMPRLKLIHTRSVGFDHI-D-LDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARE 138 (334)
T ss_dssp TCTTCCEEEESSSCCTTB-C-HHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCC
T ss_pred hCCCCeEEEECCcccccc-C-HHHHHHCCeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCcccee
Confidence 35655 666655555442 1 22222 33666664 22 235556788888877621 1 01234
Q ss_pred CCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCH
Q 011618 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (481)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L 400 (481)
|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+.. ..... ... ....+|
T Consensus 139 l~g~tvgIiG~G~IG~~vA~~l~~~-----G~-------~V~~~d~~~---------~~~~~---~~g------~~~~~l 188 (334)
T 2pi1_A 139 LNRLTLGVIGTGRIGSRVAMYGLAF-----GM-------KVLCYDVVK---------REDLK---EKG------CVYTSL 188 (334)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSC---------CHHHH---HTT------CEECCH
T ss_pred ccCceEEEECcCHHHHHHHHHHHHC-----cC-------EEEEECCCc---------chhhH---hcC------ceecCH
Confidence 5669999999999999999998754 43 688888742 11110 000 012358
Q ss_pred HHHhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 401 LEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 401 ~e~V~~vkptvLIG~S----~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
.|+++. .|+++=.- ...+.|+++.+..|. +..|+.=.|.-..
T Consensus 189 ~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~mk----~gailIN~aRg~~ 234 (334)
T 2pi1_A 189 DELLKE--SDVISLHVPYTKETHHMINEERISLMK----DGVYLINTARGKV 234 (334)
T ss_dssp HHHHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC----TTEEEEECSCGGG
T ss_pred HHHHhh--CCEEEEeCCCChHHHHhhCHHHHhhCC----CCcEEEECCCCcc
Confidence 888877 78877431 124678888888883 5667776765444
No 195
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=81.08 E-value=0.83 Score=44.78 Aligned_cols=99 Identities=15% Similarity=0.178 Sum_probs=56.6
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccc
Q 011618 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFA 385 (481)
Q Consensus 306 gll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA 385 (481)
|++.+++..| . .+++|+|||.||.+|+..|.+. | .+|+++++. .++ ..... .+.
T Consensus 108 Gf~~~L~~~~----~---k~vlvlGaGGaaraia~~L~~~-----G-------~~v~V~nRt----~~k--a~~la-~~~ 161 (269)
T 3phh_A 108 GFYLSLKQKN----Y---QNALILGAGGSAKALACELKKQ-----G-------LQVSVLNRS----SRG--LDFFQ-RLG 161 (269)
T ss_dssp HHHHHCC-------C---CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS----CTT--HHHHH-HHT
T ss_pred HHHHHHHHcC----C---CEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCC----HHH--HHHHH-HCC
Confidence 4666665433 5 8999999999999998877653 4 378888873 222 11111 111
Q ss_pred cccCCcCCcCCCCCHHHHhcccCCcEEEeecCCC----CCCCHHHHH-HhhhcCCCCCEEEec-CCC
Q 011618 386 KDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVG----GVFNEEVLK-AMRESDSVKPAIFAM-SNP 446 (481)
Q Consensus 386 ~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~----g~Ft~evv~-~Ma~~~~erPIIFaL-SNP 446 (481)
-.. .++.+ +. ++|++|-++..+ -.+.++.+. .+. +..+|+=+ .||
T Consensus 162 ~~~---------~~~~~-l~--~~DiVInaTp~Gm~~~~~l~~~~l~~~l~----~~~~v~D~vY~P 212 (269)
T 3phh_A 162 CDC---------FMEPP-KS--AFDLIINATSASLHNELPLNKEVLKGYFK----EGKLAYDLAYGF 212 (269)
T ss_dssp CEE---------ESSCC-SS--CCSEEEECCTTCCCCSCSSCHHHHHHHHH----HCSEEEESCCSS
T ss_pred CeE---------ecHHH-hc--cCCEEEEcccCCCCCCCCCChHHHHhhCC----CCCEEEEeCCCC
Confidence 000 01111 12 589999776543 157888666 453 45677755 566
No 196
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=80.99 E-value=0.68 Score=46.41 Aligned_cols=116 Identities=15% Similarity=0.245 Sum_probs=68.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecC-CCCCChhhhccccccCCcCCcCCCCCHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (481)
.||.|+|||..|..+|..|... |+- ..+.++|.+-=...+ ..+|.+. .+|....-. ...+-.+
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~-----~~~-----~~l~l~D~~~~k~~g~a~DL~~~-~~~~~~~v~-----i~~~~~~ 69 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQ-----GIT-----DELVVIDVNKEKAMGDVMDLNHG-KAFAPQPVK-----TSYGTYE 69 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSCHHHHHHHHHHHHHT-GGGSSSCCE-----EEEECGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC-----ceEEEEecchHHHHHHHHHHHhc-cccccCCeE-----EEeCcHH
Confidence 6999999999999999888753 432 479999973100000 0023222 233211000 0112246
Q ss_pred HhcccCCcEEEeecCC---CCC-----C--C----HHHHHHhhhcCCCCCEEEecCCCCCCCCCCCCHHHHHhcc
Q 011618 403 VVRKVKPHVLLGLSGV---GGV-----F--N----EEVLKAMRESDSVKPAIFAMSNPTMNGLFSCCVTTFFFYL 463 (481)
Q Consensus 403 ~V~~vkptvLIG~S~~---~g~-----F--t----~evv~~Ma~~~~erPIIFaLSNPt~~aE~~~t~eda~~wt 463 (481)
++++ +|++|=+.+. ||- | + +++++.+.+ ++...+|+-.|||.. +..+-+++.+
T Consensus 70 a~~~--aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~-~~p~a~vlvvtNPvd-----~~t~~~~k~~ 136 (326)
T 3pqe_A 70 DCKD--ADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMA-SGFDGIFLVATNPVD-----ILTYATWKFS 136 (326)
T ss_dssp GGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-TTCCSEEEECSSSHH-----HHHHHHHHHH
T ss_pred HhCC--CCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHH-hcCCeEEEEcCChHH-----HHHHHHHHhc
Confidence 7777 8988744443 342 1 2 566677754 888999999999987 4455555554
No 197
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=80.82 E-value=0.52 Score=47.03 Aligned_cols=116 Identities=18% Similarity=0.265 Sum_probs=66.7
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCC-CCCChhhhccccccCCcCCcCCCCCHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (481)
.||.|+|||..|.++|..|.. .|+. .+.++|.+-=...+. .+|.+.. .+....... ....+ .+
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~-----~~~~------~v~l~Di~~~~~~g~a~dL~~~~-~~~~~~~~v---~~t~d-~~ 69 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALI-----KQLG------DVVLFDIAQGMPNGKALDLLQTC-PIEGVDFKV---RGTND-YK 69 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC------EEEEECSSSSHHHHHHHHHHTTH-HHHTCCCCE---EEESC-GG
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCc------eEEEEeCChHHHHHHHHHHHhhh-hhcCCCcEE---EEcCC-HH
Confidence 799999999999999887764 3541 699999852100000 0111111 111111111 01123 47
Q ss_pred HhcccCCcEEEeecCCC---CC-----C------CHHHHHHhhhcCCCCCEEEecCCCCCCCCCCCCHHHHHhcc
Q 011618 403 VVRKVKPHVLLGLSGVG---GV-----F------NEEVLKAMRESDSVKPAIFAMSNPTMNGLFSCCVTTFFFYL 463 (481)
Q Consensus 403 ~V~~vkptvLIG~S~~~---g~-----F------t~evv~~Ma~~~~erPIIFaLSNPt~~aE~~~t~eda~~wt 463 (481)
++++ +|++|=+.+.| |- | -+++++.+.+ ++...+|+-.|||.. ...+-+++.+
T Consensus 70 a~~~--aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~-~~p~a~vivvtNPvd-----~~t~~~~k~s 136 (321)
T 3p7m_A 70 DLEN--SDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKH-NCPNAFVICITNPLD-----IMVNMLQKFS 136 (321)
T ss_dssp GGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECCSSHH-----HHHHHHHHHH
T ss_pred HHCC--CCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHH-HCCCcEEEEecCchH-----HHHHHHHHhc
Confidence 8888 89888554443 32 1 2456666754 788889999999987 4444555544
No 198
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=80.55 E-value=3.1 Score=41.79 Aligned_cols=131 Identities=14% Similarity=0.210 Sum_probs=85.5
Q ss_pred HHHHHHHHHhC--Cc---eEEEeecCCCchHHHHHHHHhh--cCCcccc--------CcchhHHHHHHHHHHHHHHhCCC
Q 011618 253 DEFMEAVHARW--PK---AIVQFEDFQMKWAFETLERYRK--RFCMFND--------DIQGTAGVALAGLLGTVRAQGLS 317 (481)
Q Consensus 253 defv~av~~~~--P~---~~IqfEDf~~~naf~iL~ryr~--~~~~FND--------DiQGTaaV~LAgll~Alr~~g~~ 317 (481)
+|+++.+.++- |+ .++|+==.+.-+..++++.-.- .+=.||. ...+-.-+|-.|++--|+..+.+
T Consensus 97 ~ell~~I~~LN~D~~V~GIlVQlPLP~hid~~~i~~~I~p~KDVDG~hp~N~G~L~~g~~~~~PcTp~gv~~lL~~~~i~ 176 (303)
T 4b4u_A 97 EQLLAEIEKLNANPDVHGILLQHPVPAQIDERACFDAISLAKDVDGVTCLGFGRMAMGEAAYGSATPAGIMTILKENNIE 176 (303)
T ss_dssp HHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSCGGGCTTCCCHHHHHHHHTTCCCCCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhcCCCCccEEEEeCCCccccChHHHHhccCcccccCccCcchHHHhcCCCCcccCccHHHHHHHHHHHCCC
Confidence 56666666554 54 2666544444445555544321 1211110 11233456778999999999998
Q ss_pred CCCCCCceEEEeCcc-HHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCC
Q 011618 318 LTDFADQKIVVVGAG-SAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE 396 (481)
Q Consensus 318 l~dl~~~riv~~GAG-sAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~ 396 (481)
++- .++||+|.+ -.|.-+|.||.. .|. .+.+|.++
T Consensus 177 l~G---k~vvViGRS~iVGkPla~LL~~-----~~A-------TVTi~Hs~----------------------------- 212 (303)
T 4b4u_A 177 IAG---KHAVVVGRSAILGKPMAMMLLQ-----ANA-------TVTICHSR----------------------------- 212 (303)
T ss_dssp CTT---CEEEEECCCTTTHHHHHHHHHH-----TTC-------EEEEECTT-----------------------------
T ss_pred CCC---CEEEEEeccccccchHHHHHHh-----cCC-------EEEEecCC-----------------------------
Confidence 877 999999975 567788877754 232 35554331
Q ss_pred CCCHHHHhcccCCcEEEeecCCCCCCCHHHHHH
Q 011618 397 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKA 429 (481)
Q Consensus 397 ~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~ 429 (481)
..+|.+.++. +|++|...+.|+.++.|+|+.
T Consensus 213 T~dl~~~~~~--ADIvV~A~G~p~~i~~d~vk~ 243 (303)
T 4b4u_A 213 TQNLPELVKQ--ADIIVGAVGKAELIQKDWIKQ 243 (303)
T ss_dssp CSSHHHHHHT--CSEEEECSCSTTCBCGGGSCT
T ss_pred CCCHHHHhhc--CCeEEeccCCCCccccccccC
Confidence 2358888988 999999999999999998874
No 199
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=80.54 E-value=0.99 Score=41.53 Aligned_cols=32 Identities=22% Similarity=0.400 Sum_probs=26.4
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||.||+..|..|.. .|. ++.++|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 34 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGR-----ARK-------NILLVDAG 34 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCC
Confidence 589999999999999988764 353 68999963
No 200
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=80.47 E-value=3.1 Score=39.73 Aligned_cols=104 Identities=16% Similarity=0.221 Sum_probs=59.9
Q ss_pred CceEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChh----hhccccccCCcCCcCCC
Q 011618 323 DQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPA----AAPFAKDPGDFMGLREG 397 (481)
Q Consensus 323 ~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~----k~~fA~~~~~~~~~~~~ 397 (481)
..||+|.|| |-.|..+++.|++. |-. -+++.+|+...-.. ...+... ...+..- + ..+.
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~-----g~~-----~~v~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~--D---l~d~ 87 (346)
T 4egb_A 24 AMNILVTGGAGFIGSNFVHYMLQS-----YET-----YKIINFDALTYSGN-LNNVKSIQDHPNYYFVKG--E---IQNG 87 (346)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHH-----CTT-----EEEEEEECCCTTCC-GGGGTTTTTCTTEEEEEC--C---TTCH
T ss_pred CCeEEEECCccHHHHHHHHHHHhh-----CCC-----cEEEEEeccccccc-hhhhhhhccCCCeEEEEc--C---CCCH
Confidence 389999999 88999888888764 421 26777776431100 0011110 1111110 0 1123
Q ss_pred CCHHHHhcccCCcEEEeecCCCCCC----------------CHHHHHHhhhcCCCCCEEEec
Q 011618 398 ASLLEVVRKVKPHVLLGLSGVGGVF----------------NEEVLKAMRESDSVKPAIFAM 443 (481)
Q Consensus 398 ~~L~e~V~~vkptvLIG~S~~~g~F----------------t~evv~~Ma~~~~erPIIFaL 443 (481)
.++.++++..++|++|=+.+....- |..+++++.+ ..-+.+||.=
T Consensus 88 ~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~-~~~~~~v~~S 148 (346)
T 4egb_A 88 ELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKK-YPHIKLVQVS 148 (346)
T ss_dssp HHHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHH-STTSEEEEEE
T ss_pred HHHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEeC
Confidence 4688899988899999777643221 3567888854 4445588843
No 201
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=80.24 E-value=2.2 Score=41.82 Aligned_cols=58 Identities=24% Similarity=0.324 Sum_probs=37.7
Q ss_pred cCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 294 DDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 294 DDiQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
++.++.....++..+.|++..+.+.. ++|+|+|||+.|...+++... .|. ++|+.+|+
T Consensus 155 s~~~aa~~~~~~ta~~~l~~~~~~~g----~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 212 (363)
T 3m6i_A 155 SYENGAMLEPLSVALAGLQRAGVRLG----DPVLICGAGPIGLITMLCAKA-----AGA------CPLVITDI 212 (363)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTCCTT----CCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEEES
T ss_pred CHHHHHhhhHHHHHHHHHHHcCCCCC----CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 44455544455666677777665544 599999999888777655443 353 45887775
No 202
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=80.20 E-value=0.55 Score=46.19 Aligned_cols=115 Identities=17% Similarity=0.255 Sum_probs=68.9
Q ss_pred eEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec--cc-eeecCCCCCChhhhccccccCCcCCcCCC-CC
Q 011618 325 KIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK--DG-LITKERKNLDPAAAPFAKDPGDFMGLREG-AS 399 (481)
Q Consensus 325 riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~--~G-Li~~~r~~l~~~k~~fA~~~~~~~~~~~~-~~ 399 (481)
||+|.|| |..|..++..|+. .|+- ..+.++|. +- .+.....++.+.. ++....... ... .+
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~-----~~~~-----~el~L~Di~~~~~~~~~~~~dl~~~~-~~~~~~~~i---~~~~d~ 67 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAK-----EPFM-----KDLVLIGREHSINKLEGLREDIYDAL-AGTRSDANI---YVESDE 67 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----CTTC-----CEEEEEECGGGHHHHHHHHHHHHHHH-TTSCCCCEE---EEEETT
T ss_pred EEEEECCCChhHHHHHHHHHh-----CCCC-----CEEEEEcCCCchhhhHHHHHHHHHhH-HhcCCCeEE---EeCCcc
Confidence 8999999 9999998887653 3431 46999997 21 0000000122211 222100000 011 23
Q ss_pred HHHHhcccCCcEEEeecCCC---CC-----------CCHHHHHHhhhcCCCCCEEEecCCCCCCCCCCCCHHHHHhc
Q 011618 400 LLEVVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNGLFSCCVTTFFFY 462 (481)
Q Consensus 400 L~e~V~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~~~t~eda~~w 462 (481)
+.+++++ +|++|=+.+.+ |- .+++++++|.+ ++ +.+|+--|||.. ...+-+++.
T Consensus 68 l~~al~g--aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~-~~-~~~vlv~SNPv~-----~~t~~~~k~ 135 (313)
T 1hye_A 68 NLRIIDE--SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAE-IC-DTKIFVITNPVD-----VMTYKALVD 135 (313)
T ss_dssp CGGGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HC-CCEEEECSSSHH-----HHHHHHHHH
T ss_pred hHHHhCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHH-hC-CeEEEEecCcHH-----HHHHHHHHh
Confidence 7888988 89988666654 32 35678888864 77 889999999987 445555554
No 203
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=79.86 E-value=3.4 Score=41.01 Aligned_cols=58 Identities=26% Similarity=0.402 Sum_probs=37.8
Q ss_pred cCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 294 DDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 294 DDiQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
++.++.....++..+.|++..+.+.. ++|+|+|||+.|...+.+... .|. ++++.+|+
T Consensus 158 ~~~~aal~~~~~ta~~~l~~~~~~~g----~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 215 (370)
T 4ej6_A 158 DPVHGAFCEPLACCLHGVDLSGIKAG----STVAILGGGVIGLLTVQLARL-----AGA------TTVILSTR 215 (370)
T ss_dssp CTTGGGGHHHHHHHHHHHHHHTCCTT----CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred CHHHHhhhhHHHHHHHHHHhcCCCCC----CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 34455444556666777777776544 599999999777766655443 353 46777765
No 204
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=79.81 E-value=0.6 Score=45.63 Aligned_cols=96 Identities=17% Similarity=0.227 Sum_probs=54.5
Q ss_pred CceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc----------ceeecCCCCCChhhhccccccCCcC
Q 011618 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD----------GLITKERKNLDPAAAPFAKDPGDFM 392 (481)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~----------GLi~~~r~~l~~~k~~fA~~~~~~~ 392 (481)
..||.|+|||+.|..+|..|..+ |. +++++ ++ |+..... ..+ +...
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~-----G~-------~V~l~-~~~~~~~~i~~~g~~~~~~----~~~--~~~~----- 74 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARA-----GH-------EVILI-ARPQHVQAIEATGLRLETQ----SFD--EQVK----- 74 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHT-----TC-------EEEEE-CCHHHHHHHHHHCEEEECS----SCE--EEEC-----
T ss_pred CCcEEEECcCHHHHHHHHHHHHC-----CC-------eEEEE-EcHhHHHHHHhCCeEEEcC----CCc--EEEe-----
Confidence 38999999999999999988653 42 45444 32 2211110 000 0000
Q ss_pred CcCCCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 393 GLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 393 ~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
..-..++.+ ++. +|++| ++. +-...+++++.++....+..+|..++|...
T Consensus 75 -~~~~~~~~~-~~~--~D~vi-lav-k~~~~~~~l~~l~~~l~~~~~iv~~~nGi~ 124 (318)
T 3hwr_A 75 -VSASSDPSA-VQG--ADLVL-FCV-KSTDTQSAALAMKPALAKSALVLSLQNGVE 124 (318)
T ss_dssp -CEEESCGGG-GTT--CSEEE-ECC-CGGGHHHHHHHHTTTSCTTCEEEEECSSSS
T ss_pred -eeeeCCHHH-cCC--CCEEE-EEc-ccccHHHHHHHHHHhcCCCCEEEEeCCCCC
Confidence 001123433 443 78776 443 333678899888653455668888888876
No 205
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=79.77 E-value=0.82 Score=50.20 Aligned_cols=34 Identities=35% Similarity=0.504 Sum_probs=30.2
Q ss_pred CceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
+.||+|+|||..|.-+|+.|+.+++ .+|.++|.+
T Consensus 17 ~s~VlVVGaGGLGsevak~La~aGV-----------G~ItlvD~D 50 (640)
T 1y8q_B 17 GGRVLVVGAGGIGCELLKNLVLTGF-----------SHIDLIDLD 50 (640)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTC-----------CEEEEEECC
T ss_pred cCeEEEECcCHHHHHHHHHHHHcCC-----------CeEEEecCC
Confidence 3899999999999999999997644 589999987
No 206
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=79.68 E-value=2.2 Score=42.56 Aligned_cols=127 Identities=17% Similarity=0.130 Sum_probs=75.6
Q ss_pred cCCccccCc---chhHHHHHHHHHHHHHHh---------CC--------CCCCCCCceEEEeCccHHHHHHHHHHHHHHH
Q 011618 288 RFCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL--------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAA 347 (481)
Q Consensus 288 ~~~~FNDDi---QGTaaV~LAgll~Alr~~---------g~--------~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~ 347 (481)
.+.+.|--- +.+|=-+++-+++..|-. |+ .-.+|.+.+|.|+|.|..|..+|+.+...
T Consensus 90 gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~~-- 167 (330)
T 4e5n_A 90 GVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAMADRLQGW-- 167 (330)
T ss_dssp TCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHHHHHTTTS--
T ss_pred CcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHHHHHHHHC--
Confidence 355555422 234556677788776631 10 11356669999999999999999987543
Q ss_pred HHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHHhcccCCcEEEeecC----CCCCCC
Q 011618 348 RMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG----VGGVFN 423 (481)
Q Consensus 348 ~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~----~~g~Ft 423 (481)
|+ +++.+|+... ... .+.... ....+|.|+++. .|+++=.-- ..+.++
T Consensus 168 ---G~-------~V~~~d~~~~--------~~~---~~~~~g-----~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~ 219 (330)
T 4e5n_A 168 ---GA-------TLQYHEAKAL--------DTQ---TEQRLG-----LRQVACSELFAS--SDFILLALPLNADTLHLVN 219 (330)
T ss_dssp ---CC-------EEEEECSSCC--------CHH---HHHHHT-----EEECCHHHHHHH--CSEEEECCCCSTTTTTCBC
T ss_pred ---CC-------EEEEECCCCC--------cHh---HHHhcC-----ceeCCHHHHHhh--CCEEEEcCCCCHHHHHHhC
Confidence 53 6888887431 110 010000 012358888877 777774321 236788
Q ss_pred HHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 424 EEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 424 ~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
++.++.|. +..+|.=.|.-..
T Consensus 220 ~~~l~~mk----~gailIN~arg~~ 240 (330)
T 4e5n_A 220 AELLALVR----PGALLVNPCRGSV 240 (330)
T ss_dssp HHHHTTSC----TTEEEEECSCGGG
T ss_pred HHHHhhCC----CCcEEEECCCCch
Confidence 88888883 5667777776444
No 207
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=79.39 E-value=2 Score=44.76 Aligned_cols=196 Identities=14% Similarity=0.172 Sum_probs=106.8
Q ss_pred ccccccCChhhHHHHHhcCCCCCeeEEEEec--------------------CceeeccCCCCCccccccchhhhhhhh--
Q 011618 149 GMYFSAKDKGEMMSMIYNWPAQQVDMIVLTD--------------------GSRILGLGDLGVQGIGIPIGKLDVYVA-- 206 (481)
Q Consensus 149 Glyis~~d~g~i~~~l~nwp~~~v~viVVTD--------------------G~rILGLGDlG~~Gm~I~iGKl~LY~a-- 206 (481)
|.|++..|...+.++|+.. +++++++.| |+++=-+-+.|..-.-|.++....+++
T Consensus 177 G~~~~~~D~~eik~lL~~~---Gi~v~~~~d~s~~ld~~~~~~~~~~~~~gg~~~~ei~~~~~A~~ni~~~~~~~~~A~~ 253 (458)
T 3pdi_B 177 SANLTPGDLEYIAESIESF---GLRPLLIPDLSGSLDGHLDENRFNALTTGGLSVAELATAGQSVATLVVGQSLAGAADA 253 (458)
T ss_dssp CTTCCHHHHHHHHHHHHTT---TCEEEEESCHHHHSSSCCCSSCCTTCCSCSBCHHHHGGGSSCSCEEEESGGGHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHc---CCEEEEecCccccccCccccccccccCCCCCCHHHHHhhhhCcEEEEecHHHHHHHHH
Confidence 7777777777888888864 789998854 344444555555555566666554432
Q ss_pred ---hcCCCCCceecEEeeccCCccccccCcccccccccCCChhhhhHhHHHHHHHHHHhCCceEEEeecCCCchHHHHHH
Q 011618 207 ---AAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLE 283 (481)
Q Consensus 207 ---~gGI~P~~~LPV~LDvGTnN~~LL~Dp~YlG~r~~R~~g~~Y~~~vdefv~av~~~~P~~~IqfEDf~~~naf~iL~ 283 (481)
=-|+. .+ .+ |..+|+ +-.|+|++.+.+.+-. .. + +.++
T Consensus 254 Le~~~GiP---~~----~~----------~~p~G~-----------~~T~~~l~~la~~~g~---~~-----~---~~i~ 294 (458)
T 3pdi_B 254 LAERTGVP---DR----RF----------GMLYGL-----------DAVDAWLMALAEISGN---PV-----P---DRYK 294 (458)
T ss_dssp HHHHSCCC---EE----EE----------CCSCHH-----------HHHHHHHHHHHHHHSS---CC-----C---HHHH
T ss_pred HHHHHCCC---EE----ec----------CCCcCH-----------HHHHHHHHHHHHHHCC---ch-----H---HHHH
Confidence 13454 21 11 122332 2478888888888742 11 1 2345
Q ss_pred HHhhcCCccccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEE
Q 011618 284 RYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFL 363 (481)
Q Consensus 284 ryr~~~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~l 363 (481)
+.|.+ +..++.-....|.. .|++|+|.+.-..++++.|.+ .|+.. +.+
T Consensus 295 ~er~r------------------~~~~~~d~~~~l~G---krv~i~~~~~~~~~l~~~L~e-----lGm~v------v~~ 342 (458)
T 3pdi_B 295 RQRAQ------------------LQDAMLDTHFMLSS---ARTAIAADPDLLLGFDALLRS-----MGAHT------VAA 342 (458)
T ss_dssp HHHHH------------------HHHHHHHHHHHHTT---CEEEEECCHHHHHHHHHHHHT-----TTCEE------EEE
T ss_pred HHHHH------------------HHHHHHHHHHhcCC---CEEEEECCcHHHHHHHHHHHH-----CCCEE------EEE
Confidence 54443 11222111223344 899999999999999998843 46532 222
Q ss_pred EeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEE
Q 011618 364 LDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAI 440 (481)
Q Consensus 364 vD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPII 440 (481)
.-.. ..+.+.... . .++. ..+...+++.++..+||++||-|- .+.+.+.+ .-|.|
T Consensus 343 ~~~~-----~~~~~~~~~--~----~~v~-~~D~~~le~~i~~~~pDllig~~~-----~~~~a~k~-----gip~~ 397 (458)
T 3pdi_B 343 VVPA-----RAAALVDSP--L----PSVR-VGDLEDLEHAARAGQAQLVIGNSH-----ALASARRL-----GVPLL 397 (458)
T ss_dssp EESS-----CCSCCTTTT--S----SCEE-ESHHHHHHHHHHHHTCSEEEECTT-----HHHHHHHT-----TCCEE
T ss_pred EECC-----CChhhhhCc--c----CcEE-eCCHHHHHHHHHhcCCCEEEEChh-----HHHHHHHc-----CCCEE
Confidence 2111 111121110 0 0000 012234788899999999999664 34455555 35766
No 208
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=79.29 E-value=1.1 Score=41.53 Aligned_cols=32 Identities=19% Similarity=0.335 Sum_probs=27.1
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||.||+..|..+.. .|. ++.++|++
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 47 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSAR-----YML-------KTLVIGET 47 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred cCEEEECccHHHHHHHHHHHH-----CCC-------cEEEEecc
Confidence 689999999999999988765 353 58999997
No 209
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=79.14 E-value=2.1 Score=41.99 Aligned_cols=33 Identities=15% Similarity=0.151 Sum_probs=26.5
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.||.|+|+|..|.++|..+... |. -+++++|++
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~-----G~------~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR-----NA------ARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECGG
T ss_pred CeEEEECccHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 4899999999999999988754 41 268888875
No 210
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=78.97 E-value=0.89 Score=44.52 Aligned_cols=110 Identities=15% Similarity=0.130 Sum_probs=63.1
Q ss_pred ceEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccce---eecCCCCCChhhhccccccCCcCCcCCCCC
Q 011618 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL---ITKERKNLDPAAAPFAKDPGDFMGLREGAS 399 (481)
Q Consensus 324 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL---i~~~r~~l~~~k~~fA~~~~~~~~~~~~~~ 399 (481)
.||+|.|| |..|..++..|+. .|.-...-...++++|...- ......++.+...+|..+. ....+
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~-----~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di------~~~~~ 73 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAA-----GEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGL------EATDD 73 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEE------EEESC
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCe------EeccC
Confidence 58999997 9999999888754 24210000126899997420 0000001111001221111 12356
Q ss_pred HHHHhcccCCcEEEeecCCCCC--------------CCHHHHHHhhhcCC-CCCEEEecCCCC
Q 011618 400 LLEVVRKVKPHVLLGLSGVGGV--------------FNEEVLKAMRESDS-VKPAIFAMSNPT 447 (481)
Q Consensus 400 L~e~V~~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~~-erPIIFaLSNPt 447 (481)
+.+++++ +|++|=+.+.+.. .|.++++++.+ ++ .+.+++-.|||.
T Consensus 74 ~~~a~~~--~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~-~~~~~~~vvv~snp~ 133 (327)
T 1y7t_A 74 PKVAFKD--ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAE-VAKKDVKVLVVGNPA 133 (327)
T ss_dssp HHHHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HSCTTCEEEECSSSH
T ss_pred hHHHhCC--CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHh-hcCCCeEEEEeCCch
Confidence 8899987 8999977665432 35567788854 54 555777799997
No 211
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=78.95 E-value=1.1 Score=42.41 Aligned_cols=33 Identities=27% Similarity=0.316 Sum_probs=26.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|+|+|||.||+..|..+.. .|. ++.++|++.
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 38 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGM-----RGL-------SFRFVDPLP 38 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred CcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 689999999999999988753 353 688999864
No 212
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=78.81 E-value=3 Score=40.97 Aligned_cols=49 Identities=29% Similarity=0.434 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 303 ~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
.++..+.|++..+.+.. ++|+|+|||+.|...+++... .|. ++++.+|+
T Consensus 156 ~~~ta~~al~~~~~~~g----~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 204 (356)
T 1pl8_A 156 PLSVGIHACRRGGVTLG----HKVLVCGAGPIGMVTLLVAKA-----MGA------AQVVVTDL 204 (356)
T ss_dssp HHHHHHHHHHHHTCCTT----CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred hHHHHHHHHHhcCCCCC----CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 44455666666655443 599999999888777665543 343 36777775
No 213
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=78.41 E-value=9.8 Score=37.62 Aligned_cols=104 Identities=9% Similarity=0.050 Sum_probs=64.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
.+++|+|+|..|-.+++.+... .+. ++|+++|+. + .......+.+... .. .... ++.|+
T Consensus 122 ~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~------~--a~~la~~l~~~~g-~~-~~~~-~~~ea 180 (313)
T 3hdj_A 122 SVLGLFGAGTQGAEHAAQLSAR----FAL------EAILVHDPY------A--SPEILERIGRRCG-VP-ARMA-APADI 180 (313)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECTT------C--CHHHHHHHHHHHT-SC-EEEC-CHHHH
T ss_pred cEEEEECccHHHHHHHHHHHHh----CCC------cEEEEECCc------H--HHHHHHHHHHhcC-Ce-EEEe-CHHHH
Confidence 7999999999998888876643 232 689999986 1 1222222221110 00 0123 89999
Q ss_pred hcccCCcEEEeecCCC-CCCCHHHHHHhhhcCCCCCEEEecCCCCC-CCCCCCCHHHH
Q 011618 404 VRKVKPHVLLGLSGVG-GVFNEEVLKAMRESDSVKPAIFAMSNPTM-NGLFSCCVTTF 459 (481)
Q Consensus 404 V~~vkptvLIG~S~~~-g~Ft~evv~~Ma~~~~erPIIFaLSNPt~-~aE~~~t~eda 459 (481)
++. .|++|-+...+ -+|..++ ..+..+|..++.-++ +.| +.++-.
T Consensus 181 v~~--aDIVi~aT~s~~pvl~~~~-------l~~G~~V~~vGs~~p~~~E--l~~~~~ 227 (313)
T 3hdj_A 181 AAQ--ADIVVTATRSTTPLFAGQA-------LRAGAFVGAIGSSLPHTRE--LDDEAL 227 (313)
T ss_dssp HHH--CSEEEECCCCSSCSSCGGG-------CCTTCEEEECCCSSTTCCC--CCHHHH
T ss_pred Hhh--CCEEEEccCCCCcccCHHH-------cCCCcEEEECCCCCCchhh--cCHHHH
Confidence 998 99999776532 3455432 246779998876332 578 887643
No 214
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=78.26 E-value=1.2 Score=41.65 Aligned_cols=32 Identities=16% Similarity=0.205 Sum_probs=26.6
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|||+|||.||+..|..+.. .|. ++.++|+.
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 39 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGM-----RQA-------SVKIIESL 39 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred ceEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEEcC
Confidence 589999999999999988764 353 68999986
No 215
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=77.90 E-value=3.9 Score=39.44 Aligned_cols=32 Identities=31% Similarity=0.468 Sum_probs=25.5
Q ss_pred ceEEEeC-ccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~G-AGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.||.|+| +|..|..+|..+.. .|. +++++|++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~-----~G~-------~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRA-----SGY-------PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHT-----TTC-------CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 4899999 99999999988764 353 57888764
No 216
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=77.71 E-value=7.2 Score=39.36 Aligned_cols=127 Identities=14% Similarity=0.138 Sum_probs=78.6
Q ss_pred cCCcccc-C-cchhHHHHHHHHHHHHHHh---------C---C-------------CCCCCCCceEEEeCccHHHHHHHH
Q 011618 288 RFCMFND-D-IQGTAGVALAGLLGTVRAQ---------G---L-------------SLTDFADQKIVVVGAGSAGLGVLK 340 (481)
Q Consensus 288 ~~~~FND-D-iQGTaaV~LAgll~Alr~~---------g---~-------------~l~dl~~~riv~~GAGsAg~GiA~ 340 (481)
-|++.|- + -..+|=-+++-+++..|-. | + .-.+|.+.+|.|+|.|..|..+|+
T Consensus 98 gI~V~n~pg~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~~~~l~g~tvGIIGlG~IG~~vA~ 177 (352)
T 3gg9_A 98 GVVVLEGKGSPVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRVLKGQTLGIFGYGKIGQLVAG 177 (352)
T ss_dssp TCEEECCCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTSBCCCTTCEEEEECCSHHHHHHHH
T ss_pred CeEEEECCCCcHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCcccccccccccccccCccCCCCEEEEEeECHHHHHHHH
Confidence 4666652 1 2344555677777776631 1 0 124566699999999999999999
Q ss_pred HHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHHhcccCCcEEEeec----
Q 011618 341 MAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS---- 416 (481)
Q Consensus 341 ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S---- 416 (481)
.+... |+ +++.+|+.. . . ..+.... .....+|.|+++. .|+++=.-
T Consensus 178 ~l~~~-----G~-------~V~~~d~~~--~-------~---~~~~~~g----~~~~~~l~ell~~--aDiV~l~~Plt~ 227 (352)
T 3gg9_A 178 YGRAF-----GM-------NVLVWGREN--S-------K---ERARADG----FAVAESKDALFEQ--SDVLSVHLRLND 227 (352)
T ss_dssp HHHHT-----TC-------EEEEECSHH--H-------H---HHHHHTT----CEECSSHHHHHHH--CSEEEECCCCST
T ss_pred HHHhC-----CC-------EEEEECCCC--C-------H---HHHHhcC----ceEeCCHHHHHhh--CCEEEEeccCcH
Confidence 88654 43 688888742 0 0 0111100 0012368888887 78877432
Q ss_pred CCCCCCCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 417 GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 417 ~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
...+.++++.+..|. +..++.=.|.-..
T Consensus 228 ~t~~li~~~~l~~mk----~gailIN~aRg~~ 255 (352)
T 3gg9_A 228 ETRSIITVADLTRMK----PTALFVNTSRAEL 255 (352)
T ss_dssp TTTTCBCHHHHTTSC----TTCEEEECSCGGG
T ss_pred HHHHhhCHHHHhhCC----CCcEEEECCCchh
Confidence 124778888888883 5678877776444
No 217
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=77.68 E-value=1.3 Score=42.41 Aligned_cols=34 Identities=29% Similarity=0.588 Sum_probs=27.8
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|+|+|||.||+..|..+.. .|. .++.++|+..
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~-----~g~------~~v~lie~~~ 38 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKD-----FGI------TDVIILEKGT 38 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC------CCEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHH-----cCC------CcEEEEecCC
Confidence 689999999999999998854 353 1699999874
No 218
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=77.61 E-value=4.1 Score=39.43 Aligned_cols=48 Identities=23% Similarity=0.287 Sum_probs=32.9
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 304 LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
....+.+++..+.+..| +++|+|||+.|.-.+.++..+ .| .+++.+|+
T Consensus 149 ~~ta~~~l~~~~~~~g~----~VlV~GaG~~g~~a~~~a~~~----~g-------~~Vi~~~~ 196 (348)
T 4eez_A 149 GVTTYKAIKVSGVKPGD----WQVIFGAGGLGNLAIQYAKNV----FG-------AKVIAVDI 196 (348)
T ss_dssp HHHHHHHHHHHTCCTTC----EEEEECCSHHHHHHHHHHHHT----SC-------CEEEEEES
T ss_pred eeeEEeeecccCCCCCC----EEEEEcCCCccHHHHHHHHHh----CC-------CEEEEEEC
Confidence 34456778877766544 999999999887666555433 23 46777775
No 219
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=77.61 E-value=1.8 Score=42.82 Aligned_cols=34 Identities=18% Similarity=0.222 Sum_probs=26.2
Q ss_pred CCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 322 ~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
+..+|.|+|+|..|..+|..+... |. +++++|++
T Consensus 15 ~~~~I~IIG~G~mG~alA~~L~~~-----G~-------~V~~~~~~ 48 (338)
T 1np3_A 15 QGKKVAIIGYGSQGHAHACNLKDS-----GV-------DVTVGLRS 48 (338)
T ss_dssp HTSCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECCT
T ss_pred cCCEEEEECchHHHHHHHHHHHHC-----cC-------EEEEEECC
Confidence 347999999999999999887653 53 47777764
No 220
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=77.27 E-value=1.5 Score=43.33 Aligned_cols=38 Identities=13% Similarity=0.155 Sum_probs=28.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccee
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 370 (481)
.+|||+|||.||+..|..|.+.. ..| .+|.++|++.-.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~--~~g-------~~V~vie~~~~~ 39 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLV--GSK-------ADVKVINKSRFS 39 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHH--GGG-------SEEEEEESSSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhC--CCC-------CeEEEEeCCCCc
Confidence 47999999999999999987621 123 478899887543
No 221
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=77.13 E-value=1 Score=42.27 Aligned_cols=32 Identities=22% Similarity=0.279 Sum_probs=26.5
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||.||+..|..|... |+ ++.++|+.
T Consensus 23 ~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~vie~~ 54 (338)
T 3itj_A 23 NKVTIIGSGPAAHTAAIYLARA-----EI-------KPILYEGM 54 (338)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECCS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEecC
Confidence 6899999999999999888653 53 58888883
No 222
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=76.93 E-value=1.8 Score=35.61 Aligned_cols=32 Identities=28% Similarity=0.522 Sum_probs=25.8
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|+|..|..+|+.|.. .| .+++++|++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~-----~g-------~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSE-----KG-------HDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 689999999999999988764 24 368888873
No 223
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=76.80 E-value=1.3 Score=42.21 Aligned_cols=30 Identities=30% Similarity=0.564 Sum_probs=24.0
Q ss_pred EEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 326 IVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 326 iv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
|+|+|||.||+..|..|.. .|+ ++.++|++
T Consensus 7 ViIVGaGpaGl~~A~~La~-----~G~-------~V~v~Er~ 36 (397)
T 3oz2_A 7 VLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKR 36 (397)
T ss_dssp EEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred EEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 8999999999999988764 465 47777764
No 224
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=76.72 E-value=6.2 Score=39.53 Aligned_cols=84 Identities=20% Similarity=0.384 Sum_probs=44.4
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCC--cCCcCCCCCHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGD--FMGLREGASLL 401 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~--~~~~~~~~~L~ 401 (481)
++|+|+|||+.|...+.+... .|. ++++.+|+. +.+..+++...- .- .....++.
T Consensus 215 ~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~~-----------~~~~~~~~~lGa~~vi-~~~~~~~~ 271 (404)
T 3ip1_A 215 DNVVILGGGPIGLAAVAILKH-----AGA------SKVILSEPS-----------EVRRNLAKELGADHVI-DPTKENFV 271 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSC-----------HHHHHHHHHHTCSEEE-CTTTSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC-----------HHHHHHHHHcCCCEEE-cCCCCCHH
Confidence 799999999877766655443 354 478877652 233333332110 00 00113454
Q ss_pred HHhcc----cCCcEEEeecCCCCCCCHHHHHHh
Q 011618 402 EVVRK----VKPHVLLGLSGVGGVFNEEVLKAM 430 (481)
Q Consensus 402 e~V~~----vkptvLIG~S~~~g~Ft~evv~~M 430 (481)
+.|+. -++|++|-+++.+....+..++.+
T Consensus 272 ~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l 304 (404)
T 3ip1_A 272 EAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVI 304 (404)
T ss_dssp HHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHH
Confidence 44443 368888877763322334455555
No 225
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=76.61 E-value=1.4 Score=43.83 Aligned_cols=35 Identities=26% Similarity=0.430 Sum_probs=28.4
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|||+|||.||+..|..|.+ .|.+ .+|.++|+..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~ 36 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQ-----AKYP-----GRIALINDEK 36 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEECCSS
T ss_pred CCEEEEcChHHHHHHHHHHHh-----hCcC-----CCEEEEeCCC
Confidence 689999999999999998864 3542 3799999865
No 226
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=76.54 E-value=1.6 Score=34.79 Aligned_cols=85 Identities=19% Similarity=0.164 Sum_probs=51.2
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccc-cCCcCCcCCCCCHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKD-PGDFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~-~~~~~~~~~~~~L~e 402 (481)
.+|+|+|+|..|..+++.+.. .|. .+++++|++. . .+...+..-... ..+ ..+..++.+
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~-----~g~------~~v~~~~r~~----~--~~~~~~~~~~~~~~~d---~~~~~~~~~ 65 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKT-----SSN------YSVTVADHDL----A--ALAVLNRMGVATKQVD---AKDEAGLAK 65 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----CSS------EEEEEEESCH----H--HHHHHHTTTCEEEECC---TTCHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHh-----CCC------ceEEEEeCCH----H--HHHHHHhCCCcEEEec---CCCHHHHHH
Confidence 799999999999999888765 341 3688888741 1 111111000000 000 012245777
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhh
Q 011618 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRE 432 (481)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~ 432 (481)
+++. +|++|=+. |..++..+++.+.+
T Consensus 66 ~~~~--~d~vi~~~--~~~~~~~~~~~~~~ 91 (118)
T 3ic5_A 66 ALGG--FDAVISAA--PFFLTPIIAKAAKA 91 (118)
T ss_dssp HTTT--CSEEEECS--CGGGHHHHHHHHHH
T ss_pred HHcC--CCEEEECC--CchhhHHHHHHHHH
Confidence 8875 89999655 45677888888754
No 227
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=76.48 E-value=1.9 Score=37.96 Aligned_cols=35 Identities=14% Similarity=0.297 Sum_probs=27.1
Q ss_pred CCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 322 ~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+.+|+|+|+|..|..+|+.|... .| .+++++|++
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~----~g-------~~V~vid~~ 72 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRAR----YG-------KISLGIEIR 72 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHH----HC-------SCEEEEESC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhc----cC-------CeEEEEECC
Confidence 347999999999999999988643 14 268888874
No 228
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=76.36 E-value=1.3 Score=41.68 Aligned_cols=33 Identities=27% Similarity=0.564 Sum_probs=27.4
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|+|+|||.||+..|..|.. .|+ ++.++|+..
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~vie~~~ 36 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRR-----SGL-------SYVILDAEA 36 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----SSC-------CEEEECCSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 689999999999999988764 353 689999874
No 229
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=75.97 E-value=5.4 Score=38.04 Aligned_cols=96 Identities=20% Similarity=0.219 Sum_probs=56.2
Q ss_pred CCCCceEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCC
Q 011618 320 DFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGA 398 (481)
Q Consensus 320 dl~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~ 398 (481)
++++.+|+|.|| |-.|..+++.|++ .| -+++.+|+.. ....+ .+..- + ..+..
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~~~~~-----~~~~~--D---l~d~~ 69 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRT-----QG-------RTVRGFDLRP----SGTGG-----EEVVG--S---LEDGQ 69 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHH-----TT-------CCEEEEESSC----CSSCC-----SEEES--C---TTCHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHh-----CC-------CEEEEEeCCC----CCCCc-----cEEec--C---cCCHH
Confidence 345599999998 8888888888765 35 2678777742 11111 11110 0 01234
Q ss_pred CHHHHhcccCCcEEEeecCCCCCC--------------CHHHHHHhhhcCCCCCEEEecC
Q 011618 399 SLLEVVRKVKPHVLLGLSGVGGVF--------------NEEVLKAMRESDSVKPAIFAMS 444 (481)
Q Consensus 399 ~L~e~V~~vkptvLIG~S~~~g~F--------------t~evv~~Ma~~~~erPIIFaLS 444 (481)
++.+++++ +|++|=+.+....- |..+++++.+ ..-+.|||.=|
T Consensus 70 ~~~~~~~~--~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~-~~~~~~V~~SS 126 (347)
T 4id9_A 70 ALSDAIMG--VSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASA-AGVRRFVFASS 126 (347)
T ss_dssp HHHHHHTT--CSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHH-TTCSEEEEEEE
T ss_pred HHHHHHhC--CCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEECC
Confidence 58888885 99999777643221 3457888854 55567888544
No 230
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=75.90 E-value=1.6 Score=41.30 Aligned_cols=32 Identities=22% Similarity=0.519 Sum_probs=27.2
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
..|+|+|||.+|+.+|..|.+ .|+ ++.++|+.
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~-----~G~-------~V~vlE~~ 36 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAA-----GGH-------EVLVAEAA 36 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 689999999999999988865 353 68999987
No 231
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=75.87 E-value=1.7 Score=36.48 Aligned_cols=32 Identities=31% Similarity=0.634 Sum_probs=26.1
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|+|..|..+|+.|.+. |. +++++|++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~-----g~-------~V~~id~~ 38 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAA-----GK-------KVLAVDKS 38 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECC
Confidence 6899999999999999888653 43 68888873
No 232
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=75.84 E-value=1.8 Score=37.63 Aligned_cols=32 Identities=34% Similarity=0.590 Sum_probs=26.3
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
-+++|+|+|.+|+-.|..+... | .++.++|+.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-----g-------~~v~lie~~ 33 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-----G-------LKVLVLDGG 33 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCC
Confidence 4799999999999999887653 4 368889875
No 233
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=75.76 E-value=1.3 Score=44.71 Aligned_cols=34 Identities=32% Similarity=0.419 Sum_probs=26.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccce
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 369 (481)
.+|+|+|||.||+..|..|.+. | .++.++++..-
T Consensus 12 ~~v~IIGaG~aGl~aA~~L~~~-----g-------~~v~v~E~~~~ 45 (489)
T 2jae_A 12 HSVVVLGGGPAGLCSAFELQKA-----G-------YKVTVLEARTR 45 (489)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeccCC
Confidence 7999999999999999888653 4 25777777643
No 234
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=75.75 E-value=1.6 Score=40.51 Aligned_cols=32 Identities=28% Similarity=0.493 Sum_probs=25.4
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEE-Eecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFL-LDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~l-vD~~ 367 (481)
.+|||+|||.||+..|..+... |. ++.+ +|+.
T Consensus 5 ~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~li~e~~ 37 (315)
T 3r9u_A 5 LDVAIIGGGPAGLSAGLYATRG-----GL-------KNVVMFEKG 37 (315)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-----TC-------SCEEEECSS
T ss_pred ceEEEECCCHHHHHHHHHHHHC-----CC-------CeEEEEeCC
Confidence 6899999999999999988753 43 4566 8873
No 235
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=75.44 E-value=1.5 Score=42.31 Aligned_cols=33 Identities=18% Similarity=0.305 Sum_probs=27.7
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
..|+|+|||.+|+.+|..|.+ .|+ ++.++|+..
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~-----~G~-------~V~llE~~~ 50 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAK-----ENK-------NTALFESGT 50 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCC
Confidence 689999999999999998875 353 699999864
No 236
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=75.19 E-value=1.7 Score=41.09 Aligned_cols=32 Identities=28% Similarity=0.459 Sum_probs=26.7
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||.||+..|..+.. .|. ++.++|+.
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 40 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGR-----AQL-------STLILEKG 40 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----cCC-------cEEEEeCC
Confidence 689999999999999988764 353 68899987
No 237
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=75.16 E-value=0.93 Score=49.95 Aligned_cols=36 Identities=31% Similarity=0.500 Sum_probs=30.7
Q ss_pred CCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 322 ~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
++.||+|+|+|..|.-+|+.|+.+ |+ .+|.++|.+=
T Consensus 410 ~~~~vlvvG~GglG~~~~~~L~~~-----Gv------g~i~l~D~d~ 445 (805)
T 2nvu_B 410 DTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMDT 445 (805)
T ss_dssp HTCCEEEECCSSHHHHHHHHHHTT-----TC------CEEEEEECCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHHc-----CC------CcEEEECCCe
Confidence 459999999999999999988865 44 6899999873
No 238
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=75.02 E-value=0.8 Score=46.24 Aligned_cols=116 Identities=13% Similarity=0.056 Sum_probs=68.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCC-CCCChhhhccccccCCcCCcCCCCCHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (481)
.||.|+|||..|.++|..+... |+- ..+.++|.+-=..++. .+|.+. ..|..... . ....++++
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~-----g~~-----~ev~L~Di~~~~~~g~a~DL~~~-~~~~~~~~-i---~~t~d~~~ 86 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMK-----DLA-----DEVALVDVMEDKLKGEMMDLEHG-SLFLHTAK-I---VSGKDYSV 86 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHH-----CCC-----SEEEEECSCHHHHHHHHHHHHHH-GGGSCCSE-E---EEESSSCS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC-----CeEEEEECCHHHHHHHHHHhhhh-hhcccCCe-E---EEcCCHHH
Confidence 6999999999999999988753 441 4799999731000000 122222 12322110 0 01234544
Q ss_pred HhcccCCcEEEeecC---CCCC-----------CCHHHHHHhhhcCCCCCEEEecCCCCCCCCCCCCHHHHHhcc
Q 011618 403 VVRKVKPHVLLGLSG---VGGV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNGLFSCCVTTFFFYL 463 (481)
Q Consensus 403 ~V~~vkptvLIG~S~---~~g~-----------Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~~~t~eda~~wt 463 (481)
+++ +|++|=+.+ .||- .-+++++.+.+ ++...+|+-.|||.. ....-+++.+
T Consensus 87 -~~d--aDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k-~~P~a~ilvvtNPvd-----i~t~~~~k~s 152 (330)
T 3ldh_A 87 -SAG--SKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVK-HSPDCLKELHPELGT-----DKNKQDWKLS 152 (330)
T ss_dssp -CSS--CSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHH-HCTTCEEEECSSSHH-----HHHHHHHHHH
T ss_pred -hCC--CCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHh-hCCCceEEeCCCccH-----HHHHHHHHHh
Confidence 666 899883333 3331 22456667754 789999999999977 4555666655
No 239
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=74.86 E-value=2.1 Score=43.20 Aligned_cols=34 Identities=21% Similarity=0.347 Sum_probs=26.7
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.||||+|||.||+..|..|..... + -+|.++|++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~---~-------~~VtlI~~~ 36 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMP---D-------LKITLISDR 36 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT---T-------CEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHhccCc---C-------CeEEEEcCC
Confidence 489999999999999998865321 1 368888876
No 240
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=74.78 E-value=2.4 Score=36.14 Aligned_cols=32 Identities=13% Similarity=0.251 Sum_probs=26.3
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|+|..|..+|+.|... | .+++++|++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~-----g-------~~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS-----D-------IPLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----C-------CCEEEEECC
Confidence 3899999999999999988753 4 368889884
No 241
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=74.72 E-value=1.9 Score=42.46 Aligned_cols=34 Identities=26% Similarity=0.327 Sum_probs=27.4
Q ss_pred CceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
..+|+|+|||.||+..|..|... |+ ++.++|+..
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~-----G~-------~V~v~E~~~ 56 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQS-----GI-------DCDVYEAVK 56 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-------CEEEEeCCC
Confidence 37899999999999999888653 53 578888754
No 242
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=74.69 E-value=1.7 Score=41.03 Aligned_cols=33 Identities=33% Similarity=0.576 Sum_probs=26.7
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|+|+|||.+|+..|..|.. .|+ ++.++|+..
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~-----~G~-------~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHH-----CCC-------cEEEEECCC
Confidence 579999999999999998865 354 588888763
No 243
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=74.64 E-value=3.3 Score=39.11 Aligned_cols=30 Identities=20% Similarity=0.362 Sum_probs=24.3
Q ss_pred eEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
||.|+|+|..|..+|..|... |. +++++|+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-----g~-------~V~~~~~ 31 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKH-----GY-------PLIIYDV 31 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHT-----TC-------CEEEECS
T ss_pred eEEEEeccHHHHHHHHHHHHC-----CC-------EEEEEeC
Confidence 799999999999999988643 42 5777776
No 244
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=74.46 E-value=1.7 Score=42.04 Aligned_cols=33 Identities=24% Similarity=0.471 Sum_probs=27.6
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
..|+|+|||.+|+.+|..|.+ .|. ++.++|+..
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~-----~G~-------~V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAK-----RGE-------EVTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 689999999999999998875 353 599999864
No 245
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=74.34 E-value=6 Score=35.02 Aligned_cols=50 Identities=12% Similarity=0.270 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeC-ccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 303 ALAGLLGTVRAQGLSLTDFADQKIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 303 ~LAgll~Alr~~g~~l~dl~~~riv~~G-AGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.++..+.+++....--.. ++++|.| +|..|..+++++... | -+++.+|++
T Consensus 22 ~~~ta~~~l~~~~~~~~g---~~vlV~Ga~ggiG~~~~~~~~~~-----G-------~~V~~~~~~ 72 (198)
T 1pqw_A 22 AYLTAWHSLCEVGRLSPG---ERVLIHSATGGVGMAAVSIAKMI-----G-------ARIYTTAGS 72 (198)
T ss_dssp HHHHHHHHHHTTSCCCTT---CEEEETTTTSHHHHHHHHHHHHH-----T-------CEEEEEESS
T ss_pred HHHHHHHHHHHHhCCCCC---CEEEEeeCCChHHHHHHHHHHHc-----C-------CEEEEEeCC
Confidence 444445555433222233 7999999 488888888766543 4 257877763
No 246
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=74.31 E-value=1.9 Score=41.57 Aligned_cols=33 Identities=9% Similarity=0.183 Sum_probs=26.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|+|+|||.||+..|..+.. .|+ ++.++|+..
T Consensus 15 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 47 (360)
T 3ab1_A 15 RDLTIIGGGPTGIFAAFQCGM-----NNI-------SCRIIESMP 47 (360)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecCC
Confidence 689999999999999987754 353 688999863
No 247
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=74.28 E-value=6.2 Score=38.09 Aligned_cols=56 Identities=20% Similarity=0.252 Sum_probs=33.2
Q ss_pred cchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 296 IQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 296 iQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
.++...-.++..+.+.+..+.+.. ++++|.|||+.|...+.++.. .|. +.++.+|+
T Consensus 138 ~~aa~l~~~~~~~~~~~~~~~~~g----~~VlV~GaG~vG~~aiq~ak~-----~G~------~~vi~~~~ 193 (346)
T 4a2c_A 138 EDGAFIEPITVGLHAFHLAQGCEN----KNVIIIGAGTIGLLAIQCAVA-----LGA------KSVTAIDI 193 (346)
T ss_dssp GGGGGHHHHHHHHHHHHHTTCCTT----SEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred HHHHhchHHHHHHHHHHHhccCCC----CEEEEECCCCcchHHHHHHHH-----cCC------cEEEEEec
Confidence 344433334444555666555443 599999999888766655443 343 45666664
No 248
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=74.27 E-value=1.9 Score=40.71 Aligned_cols=32 Identities=38% Similarity=0.593 Sum_probs=26.5
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||.||+..|..+.+ .|+ ++.++|+.
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 48 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAAR-----SGF-------SVAILDKA 48 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CcEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCC
Confidence 689999999999999988764 353 68899985
No 249
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=74.15 E-value=1.8 Score=41.83 Aligned_cols=33 Identities=27% Similarity=0.485 Sum_probs=26.6
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
..|+|+|||.||+..|..|.. .|+ ++.++|+.-
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~-----~G~-------~V~l~E~~~ 37 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKRP 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 579999999999999988765 353 577888764
No 250
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=74.06 E-value=2.3 Score=42.65 Aligned_cols=38 Identities=26% Similarity=0.457 Sum_probs=28.8
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
..|||+|||.||+..|..|.+... ..+ . -++.++|+..
T Consensus 31 ~dVvIIGaG~aGl~aA~~L~~~g~-~~~-----~-~~v~liE~~~ 68 (463)
T 3s5w_A 31 HDLIGVGFGPSNIALAIALQERAQ-AQG-----A-LEVLFLDKQG 68 (463)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHHH-HHC-----C-CCEEEEESCS
T ss_pred CCEEEECCCHHHHHHHHHHHhccc-ccC-----c-ccEEEEecCC
Confidence 479999999999999999987653 100 0 3688998875
No 251
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=74.00 E-value=1.9 Score=42.05 Aligned_cols=33 Identities=30% Similarity=0.332 Sum_probs=26.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|+|+|||.||+..|..|.. .|+ ++.++|+.-
T Consensus 12 ~dVvIVGaG~aGl~~A~~L~~-----~G~-------~v~viE~~~ 44 (379)
T 3alj_A 12 RRAEVAGGGFAGLTAAIALKQ-----NGW-------DVRLHEKSS 44 (379)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecCC
Confidence 789999999999999988765 353 688888754
No 252
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=73.85 E-value=1.8 Score=41.73 Aligned_cols=35 Identities=31% Similarity=0.372 Sum_probs=28.4
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccee
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 370 (481)
..|+|+|||.+|+.+|..|.+ .|. ++.++|+....
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~-----~G~-------~V~vie~~~~~ 38 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAK-----QGV-------KTLLVDAFDPP 38 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCCCCC
Confidence 579999999999999998865 353 69999987543
No 253
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=73.84 E-value=2.1 Score=44.20 Aligned_cols=34 Identities=26% Similarity=0.409 Sum_probs=27.9
Q ss_pred CceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
..+|+|+|+|.||+..|..|... |. ++.++|+..
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~-----G~-------~V~v~e~~~ 155 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAK-----GY-------EVHVYDRYD 155 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeccC
Confidence 37899999999999999998754 53 588998853
No 254
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=73.64 E-value=2.6 Score=42.10 Aligned_cols=32 Identities=28% Similarity=0.355 Sum_probs=27.1
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
..|||+|||.+|+.+|..|.+..- .++.++|+
T Consensus 24 ~dVvIIGgGiaGls~A~~La~~G~-----------~~V~vlE~ 55 (448)
T 3axb_A 24 FDYVVVGAGVVGLAAAYYLKVWSG-----------GSVLVVDA 55 (448)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHC-----------SCEEEEES
T ss_pred CCEEEECcCHHHHHHHHHHHhCCC-----------CcEEEEcc
Confidence 789999999999999998876530 36999998
No 255
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=73.55 E-value=1.1 Score=44.94 Aligned_cols=116 Identities=18% Similarity=0.214 Sum_probs=68.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCC-CCCChhhhccccccCCcCCcCCCCCHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (481)
.||.|+|||..|.++|..++.. |+- ..+.++|.+-=..++. .+|.+. ..|..... . ....+.+
T Consensus 20 ~kV~ViGaG~vG~~~a~~l~~~-----~~~-----~el~L~Di~~~~~~g~a~DL~~~-~~~~~~~~-i---~~~~d~~- 83 (331)
T 4aj2_A 20 NKITVVGVGAVGMACAISILMK-----DLA-----DELALVDVIEDKLKGEMMDLQHG-SLFLKTPK-I---VSSKDYS- 83 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-----TCC-----SEEEEECSCHHHHHHHHHHHHHT-GGGCSCCE-E---EECSSGG-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC-----ceEEEEeCChHHHHHHHHhhhhh-hhccCCCe-E---EEcCCHH-
Confidence 7999999999999999887642 432 4799999741000000 022221 12322110 0 0123444
Q ss_pred HhcccCCcEEEeecCC---CC-----CC------CHHHHHHhhhcCCCCCEEEecCCCCCCCCCCCCHHHHHhcc
Q 011618 403 VVRKVKPHVLLGLSGV---GG-----VF------NEEVLKAMRESDSVKPAIFAMSNPTMNGLFSCCVTTFFFYL 463 (481)
Q Consensus 403 ~V~~vkptvLIG~S~~---~g-----~F------t~evv~~Ma~~~~erPIIFaLSNPt~~aE~~~t~eda~~wt 463 (481)
++++ .|++|=+.+. || +| -+++++.|++ ++...+|+-.|||.. +..+-+++.+
T Consensus 84 ~~~~--aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~-~~p~a~vlvvtNPvd-----i~t~~~~k~s 150 (331)
T 4aj2_A 84 VTAN--SKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVK-YSPQCKLLIVSNPVD-----ILTYVAWKIS 150 (331)
T ss_dssp GGTT--EEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHH-HCTTCEEEECSSSHH-----HHHHHHHHHH
T ss_pred HhCC--CCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHH-HCCCeEEEEecChHH-----HHHHHHHHHh
Confidence 5777 8988744443 33 12 2467777765 789999999999987 4455566654
No 256
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=73.48 E-value=1.9 Score=42.56 Aligned_cols=33 Identities=24% Similarity=0.560 Sum_probs=26.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|+|+|||.||+..|..|.. .|+ ++.++|+..
T Consensus 27 ~dV~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 59 (398)
T 2xdo_A 27 KNVAIIGGGPVGLTMAKLLQQ-----NGI-------DVSVYERDN 59 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 789999999999999988764 353 688888753
No 257
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=73.40 E-value=1.9 Score=42.49 Aligned_cols=33 Identities=33% Similarity=0.521 Sum_probs=26.6
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|+|+|||.||+..|..|.++ |. ++.++++..
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~-----G~-------~V~vlE~~~ 34 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNA-----GK-------KVLLLEGGE 34 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHc-----CC-------eEEEEecCC
Confidence 3699999999999999988754 53 688888754
No 258
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=73.16 E-value=2.1 Score=43.52 Aligned_cols=36 Identities=17% Similarity=0.203 Sum_probs=27.6
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccce
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 369 (481)
.+|||+|||.||+..|..|.+.. .| .+|.++|+..-
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~---~g-------~~Vtvie~~~~ 39 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLD---PE-------AHVTMIDQASR 39 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHC---TT-------SEEEEECCC--
T ss_pred CcEEEECCCHHHHHHHHHHHhhC---cC-------CCEEEEECCCc
Confidence 68999999999999999887641 13 37889988754
No 259
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=73.08 E-value=2.2 Score=42.08 Aligned_cols=33 Identities=27% Similarity=0.391 Sum_probs=26.5
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|+|+|||.||+..|..|.. .|+ ++.++|+..
T Consensus 6 ~~V~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 38 (397)
T 2vou_A 6 DRIAVVGGSISGLTAALMLRD-----AGV-------DVDVYERSP 38 (397)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecCC
Confidence 689999999999999988765 353 577777653
No 260
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=73.02 E-value=2 Score=41.64 Aligned_cols=35 Identities=23% Similarity=0.385 Sum_probs=28.1
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
..|+|+|||.+|+.+|..|.+. .|. .++.++|+..
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~----~G~------~~V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKN----HGI------TNVAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH----HCC------CCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHh----cCC------CcEEEEeCCC
Confidence 6899999999999999988761 241 2699999875
No 261
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=72.89 E-value=1.2 Score=47.68 Aligned_cols=34 Identities=21% Similarity=0.400 Sum_probs=29.7
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.||+|+|+|..|.-||+.|+.+++ ++|.++|.+=
T Consensus 33 ~~VlvvG~GGlGseiak~La~aGV-----------g~itlvD~D~ 66 (531)
T 1tt5_A 33 AHVCLINATATGTEILKNLVLPGI-----------GSFTIIDGNQ 66 (531)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-----------SEEEEECCCB
T ss_pred CeEEEECcCHHHHHHHHHHHHcCC-----------CeEEEEeCCE
Confidence 899999999999999999887644 6899999763
No 262
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=72.81 E-value=1.9 Score=41.40 Aligned_cols=34 Identities=24% Similarity=0.393 Sum_probs=28.0
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccce
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 369 (481)
..|+|+|||.+|+.+|..|.+. |+ ++.++|+...
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~-----G~-------~V~vle~~~~ 36 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRA-----GL-------NVLMTDAHMP 36 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHT-----TC-------CEEEECSSCS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecCCC
Confidence 5799999999999999988753 53 6899998754
No 263
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=72.76 E-value=2.1 Score=42.66 Aligned_cols=35 Identities=23% Similarity=0.449 Sum_probs=28.3
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|||+|||.||+..|..|.+ .|.+ .+|.++|+..
T Consensus 10 ~~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~ 44 (415)
T 3lxd_A 10 ADVVIVGAGHGGAQAAIALRQ-----NGFE-----GRVLVIGREP 44 (415)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEEESSS
T ss_pred CcEEEECChHHHHHHHHHHHc-----cCcC-----CCEEEEecCC
Confidence 689999999999999998865 3543 3688998864
No 264
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=72.71 E-value=1.2 Score=44.41 Aligned_cols=93 Identities=20% Similarity=0.288 Sum_probs=54.5
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
-||+|+|||-.|--+|+.|.+ ...+.+.|+.. ..+...+ +++.... .+ ..+..+|.++
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-------------~~~v~~~~~~~------~~~~~~~-~~~~~~~-~d-~~d~~~l~~~ 74 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-------------EFDVYIGDVNN------ENLEKVK-EFATPLK-VD-ASNFDKLVEV 74 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------------TSEEEEEESCH------HHHHHHT-TTSEEEE-CC-TTCHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHhc-------------CCCeEEEEcCH------HHHHHHh-ccCCcEE-Ee-cCCHHHHHHH
Confidence 689999999998888776632 13577776531 1111111 1121100 00 0123468899
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCC
Q 011618 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (481)
Q Consensus 404 V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSN 445 (481)
+++ .|++|-+ .|.-+...++++-.+ +... ++=+|-
T Consensus 75 ~~~--~DvVi~~--~p~~~~~~v~~~~~~--~g~~-yvD~s~ 109 (365)
T 3abi_A 75 MKE--FELVIGA--LPGFLGFKSIKAAIK--SKVD-MVDVSF 109 (365)
T ss_dssp HTT--CSEEEEC--CCGGGHHHHHHHHHH--HTCE-EEECCC
T ss_pred HhC--CCEEEEe--cCCcccchHHHHHHh--cCcc-eEeeec
Confidence 987 7998854 467788899988765 2333 455663
No 265
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=72.71 E-value=1.2 Score=46.41 Aligned_cols=32 Identities=13% Similarity=0.296 Sum_probs=25.3
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.||||+|+|.||+..|+.|.. .+ -+|.++|++
T Consensus 43 prVVIIGgG~AGl~~A~~L~~-----~~-------~~VtLId~~ 74 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDT-----KK-------YNVSIISPR 74 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCT-----TT-------CEEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHhhh-----CC-------CcEEEECCC
Confidence 589999999999998876632 22 379999986
No 266
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=72.55 E-value=2.3 Score=43.09 Aligned_cols=32 Identities=25% Similarity=0.535 Sum_probs=26.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|||+|||.||+..|..+.+ .| .++.++|+.
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 36 (467)
T 1zk7_A 5 VQVAVIGSGGAAMAAALKAVE-----QG-------AQVTLIERG 36 (467)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 689999999999999987754 34 379999987
No 267
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=72.48 E-value=14 Score=36.86 Aligned_cols=120 Identities=18% Similarity=0.137 Sum_probs=70.5
Q ss_pred CCccccCcc---hhHHHHHHHHHHHHHHh---------C-------CCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHH
Q 011618 289 FCMFNDDIQ---GTAGVALAGLLGTVRAQ---------G-------LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARM 349 (481)
Q Consensus 289 ~~~FNDDiQ---GTaaV~LAgll~Alr~~---------g-------~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~ 349 (481)
|.+.|-.-- .+|=-+++.+++..|-. | ..-.+|.+.++.|+|.|..|..+|+.+...
T Consensus 88 I~v~n~p~~~~~~vAE~~~~l~L~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~g~tvGIiG~G~IG~~va~~~~~f---- 163 (334)
T 3kb6_A 88 ILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAF---- 163 (334)
T ss_dssp CEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT----
T ss_pred CEEEECCCcCcHHHHHHHHHHHHHHhhccccccccccccccccccccccceecCcEEEEECcchHHHHHHHhhccc----
Confidence 666654332 33444577777665421 1 112345569999999999999999988665
Q ss_pred cCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHHhcccCCcEEEeec----CCCCCCCHH
Q 011618 350 AGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFNEE 425 (481)
Q Consensus 350 ~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S----~~~g~Ft~e 425 (481)
|+ +++.+|+.. + .......+ ...+|.|.++. .|+++=.- ..-+.|+++
T Consensus 164 -g~-------~v~~~d~~~-----~---~~~~~~~~----------~~~~l~ell~~--sDivslh~Plt~~T~~li~~~ 215 (334)
T 3kb6_A 164 -GM-------KVLCYDVVK-----R---EDLKEKGC----------VYTSLDELLKE--SDVISLHVPYTKETHHMINEE 215 (334)
T ss_dssp -TC-------EEEEECSSC-----C---HHHHHTTC----------EECCHHHHHHH--CSEEEECCCCCTTTTTCBCHH
T ss_pred -Cc-------eeeecCCcc-----c---hhhhhcCc----------eecCHHHHHhh--CCEEEEcCCCChhhccCcCHH
Confidence 33 677777631 1 11111111 13468888877 77776321 113778888
Q ss_pred HHHHhhhcCCCCCEEEecC
Q 011618 426 VLKAMRESDSVKPAIFAMS 444 (481)
Q Consensus 426 vv~~Ma~~~~erPIIFaLS 444 (481)
.++.|. +..++.=.|
T Consensus 216 ~l~~mk----~~a~lIN~a 230 (334)
T 3kb6_A 216 RISLMK----DGVYLINTA 230 (334)
T ss_dssp HHHHSC----TTEEEEECS
T ss_pred HHhhcC----CCeEEEecC
Confidence 888883 455655444
No 268
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=72.46 E-value=2.2 Score=40.22 Aligned_cols=38 Identities=18% Similarity=0.233 Sum_probs=24.8
Q ss_pred CCCCCceEEEeCcc-H--HHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 319 TDFADQKIVVVGAG-S--AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 319 ~dl~~~riv~~GAG-s--Ag~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|++.++||.||. . .|.+||+.+.+ .|. +++++|++-
T Consensus 22 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G~-------~V~~~~r~~ 62 (280)
T 3nrc_A 22 GFLAGKKILITGLLSNKSIAYGIAKAMHR-----EGA-------ELAFTYVGQ 62 (280)
T ss_dssp CTTTTCEEEECCCCSTTCHHHHHHHHHHH-----TTC-------EEEEEECTT
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHH-----cCC-------EEEEeeCch
Confidence 34555999999983 3 55556665543 452 688888853
No 269
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=72.41 E-value=2.5 Score=40.84 Aligned_cols=33 Identities=27% Similarity=0.530 Sum_probs=27.4
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
..|+|+|||.+|+.+|-.|.+ .| .++.++|+..
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~-----~G-------~~V~vle~~~ 39 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILAR-----KG-------YSVHILARDL 39 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CEEEEEeccC
Confidence 689999999999999998854 35 3799999864
No 270
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=72.20 E-value=2.7 Score=42.07 Aligned_cols=37 Identities=24% Similarity=0.326 Sum_probs=29.3
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccee
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 370 (481)
.+|||+|||.||+..|..+.+. |.+ .+|.++|+..-+
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~-----g~~-----~~V~lie~~~~~ 44 (408)
T 2gqw_A 8 APVVVLGAGLASVSFVAELRQA-----GYQ-----GLITVVGDEAER 44 (408)
T ss_dssp SSEEEECCSHHHHHHHHHHHHH-----TCC-----SCEEEEESSCSC
T ss_pred CcEEEECChHHHHHHHHHHHcc-----CCC-----CeEEEEECCCCC
Confidence 6899999999999999988754 432 368999987643
No 271
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=71.96 E-value=2.5 Score=41.33 Aligned_cols=49 Identities=18% Similarity=0.327 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 303 ~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
.++..+.|++..+.+.. ++|+|+|||..|...+.+... .|. ++|+.+|+
T Consensus 151 ~~~ta~~al~~~~~~~g----~~VlV~GaG~vG~~a~qla~~-----~Ga------~~Vi~~~~ 199 (352)
T 3fpc_A 151 MMTTGFHGAELANIKLG----DTVCVIGIGPVGLMSVAGANH-----LGA------GRIFAVGS 199 (352)
T ss_dssp HHHHHHHHHHHTTCCTT----CCEEEECCSHHHHHHHHHHHT-----TTC------SSEEEECC
T ss_pred hhHHHHHHHHhcCCCCC----CEEEEECCCHHHHHHHHHHHH-----cCC------cEEEEECC
Confidence 44455666766665544 599999999877776655432 353 46887776
No 272
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=71.88 E-value=1.8 Score=42.44 Aligned_cols=33 Identities=27% Similarity=0.475 Sum_probs=26.8
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~-----~G~-------~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNK-----SGF-------KVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 589999999999999987754 464 588888863
No 273
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=71.87 E-value=2.3 Score=40.70 Aligned_cols=32 Identities=19% Similarity=0.249 Sum_probs=26.7
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.||.|+|+|..|.+||..+..+ |. +++++|++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~-----G~-------~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH-----GF-------AVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCC
Confidence 6899999999999999988754 53 68888874
No 274
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=71.85 E-value=2.1 Score=41.88 Aligned_cols=33 Identities=12% Similarity=0.345 Sum_probs=26.5
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~-----~G~-------~V~viE~~~ 39 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGR-----QGH-------RVVVVEQAR 39 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCC
Confidence 689999999999999988765 354 577888753
No 275
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=71.76 E-value=2.6 Score=44.16 Aligned_cols=36 Identities=22% Similarity=0.370 Sum_probs=28.8
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccce
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 369 (481)
.+|||+|||.||+..|..|... ..| -+|.++|+..-
T Consensus 37 ~~VvIIGgG~AGl~aA~~L~~~---~~g-------~~V~vie~~~~ 72 (588)
T 3ics_A 37 RKIVVVGGVAGGASVAARLRRL---SEE-------DEIIMVERGEY 72 (588)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---CSS-------SEEEEECSSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhh---CcC-------CCEEEEECCCC
Confidence 6899999999999999988764 113 37899998754
No 276
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=71.70 E-value=2.3 Score=41.55 Aligned_cols=35 Identities=26% Similarity=0.564 Sum_probs=28.4
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccee
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 370 (481)
..|+|+|||.+|+.+|..|.+ .|. ++.++|+....
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~-----~G~-------~V~vlE~~~~~ 39 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAE-----RGH-------RVLVLERHTFF 39 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSCTT
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCCCC
Confidence 579999999999999988765 353 68999987543
No 277
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=71.31 E-value=3.1 Score=41.09 Aligned_cols=38 Identities=16% Similarity=0.300 Sum_probs=28.0
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||-+|+..|..|.++.. +.+ -..++.++++.
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~-~~~-----~~~~V~vlEa~ 43 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIK-EKN-----LPLELTLVEAS 43 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHT-TTT-----CSEEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHHHhcc-ccC-----CCCCEEEEECC
Confidence 689999999999999999988751 001 01367788775
No 278
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=71.01 E-value=5.9 Score=41.06 Aligned_cols=32 Identities=31% Similarity=0.395 Sum_probs=26.2
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.||.|+|+|..|..+|..+... | -+++++|++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-----G-------~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-----G-------ANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhc-----C-------CEEEEEECC
Confidence 5899999999999999988753 4 268888875
No 279
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=70.98 E-value=2.5 Score=41.82 Aligned_cols=33 Identities=36% Similarity=0.480 Sum_probs=25.8
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||.||+..|..|.. .|++ ++.++|+.
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~-----~G~~------~v~v~E~~ 37 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQ-----AGIG------KVTLLESS 37 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCS------EEEEEESS
T ss_pred CeEEEECCCHHHHHHHHHHHh-----CCCC------eEEEEECC
Confidence 689999999999999988765 3542 27777764
No 280
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=70.96 E-value=2.9 Score=41.06 Aligned_cols=33 Identities=36% Similarity=0.413 Sum_probs=25.2
Q ss_pred eEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
+|+|+|||.||+..|-.|... ..|+ ++.++|+.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~---~~G~-------~V~v~E~~ 34 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQA---RPLW-------AIDIVEKN 34 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHH---CTTS-------EEEEECSS
T ss_pred eEEEECCCHHHHHHHHHHHhc---CCCC-------CEEEEECC
Confidence 699999999999999887654 0143 57777765
No 281
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=70.90 E-value=2.5 Score=39.51 Aligned_cols=33 Identities=27% Similarity=0.455 Sum_probs=26.5
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||.||+..|..+.+ .|. .++.++|++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~------~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR-----GGV------KNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC------SSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHH-----CCC------CcEEEEcCC
Confidence 479999999999999988764 353 168899985
No 282
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=70.86 E-value=2.6 Score=41.11 Aligned_cols=33 Identities=24% Similarity=0.505 Sum_probs=26.1
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|+|+|||.||+..|..|... |+ ++.++|+..
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~-----G~-------~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA-----GI-------DNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 5799999999999999888654 53 577777653
No 283
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=70.84 E-value=5.5 Score=38.92 Aligned_cols=44 Identities=27% Similarity=0.346 Sum_probs=27.6
Q ss_pred cchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHH
Q 011618 296 IQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAV 343 (481)
Q Consensus 296 iQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~ 343 (481)
.++.....++..+.|++..+.+.. ++|+|.|||..|...+++..
T Consensus 146 ~~aa~~~~~~ta~~al~~~~~~~g----~~VlV~GaG~vG~~a~qla~ 189 (352)
T 1e3j_A 146 EEGALLEPLSVGVHACRRAGVQLG----TTVLVIGAGPIGLVSVLAAK 189 (352)
T ss_dssp HHHHTHHHHHHHHHHHHHHTCCTT----CEEEEECCSHHHHHHHHHHH
T ss_pred HHHHhhchHHHHHHHHHhcCCCCC----CEEEEECCCHHHHHHHHHHH
Confidence 344333344555666666655433 59999999887777766544
No 284
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=70.79 E-value=3.6 Score=40.02 Aligned_cols=54 Identities=19% Similarity=0.326 Sum_probs=32.7
Q ss_pred chhHHHHHHHHHHHHH-HhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 297 QGTAGVALAGLLGTVR-AQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 297 QGTaaV~LAgll~Alr-~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
++.....++..+.|++ ..+. .. ++|+|+|||..|..++++... .|. ++++.+|+
T Consensus 143 ~aa~~~~~~ta~~~l~~~~~~--~g---~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~ 197 (343)
T 2dq4_A 143 VAAILEPFGNAVHTVYAGSGV--SG---KSVLITGAGPIGLMAAMVVRA-----SGA------GPILVSDP 197 (343)
T ss_dssp HHTTHHHHHHHHHHHHSTTCC--TT---SCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECS
T ss_pred HHHhhhHHHHHHHHHHHhCCC--CC---CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 3333334444456665 3333 44 899999999888777665543 353 36777775
No 285
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=70.76 E-value=2.3 Score=43.63 Aligned_cols=39 Identities=23% Similarity=0.454 Sum_probs=28.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|+|+|||.||+..|..+.+.. ..|++. .++.++|+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~--~~G~~~----~~V~v~E~~~ 41 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQ--EKGAEI----PELVCFEKQA 41 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHH--HTTCCC----CEEEEECSSS
T ss_pred CcEEEECccHHHHHHHHHHHhhh--hcCCCC----CcEEEEEcCC
Confidence 48999999999999999987632 146421 1388998863
No 286
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=70.70 E-value=2.9 Score=35.86 Aligned_cols=33 Identities=12% Similarity=0.231 Sum_probs=26.7
Q ss_pred CceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
+.+|+|+|+|..|..+|++|... | .++.++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~-----g-------~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQR-----G-------QNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEECC
Confidence 36899999999999999988653 4 368888874
No 287
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=70.68 E-value=2.5 Score=41.48 Aligned_cols=32 Identities=31% Similarity=0.406 Sum_probs=26.0
Q ss_pred eEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
+|+|+|||.||+..|..|.+. | .++.++++..
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G-------~~V~vlE~~~ 33 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKA-----G-------HEVEVFERLP 33 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----T-------CEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHhC-----C-------CceEEEeCCC
Confidence 699999999999999888753 5 3688888763
No 288
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=70.61 E-value=2.6 Score=41.78 Aligned_cols=36 Identities=22% Similarity=0.325 Sum_probs=29.0
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccee
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 370 (481)
..|||+|||.||+.+|-.|.+ .|. +++.++|+....
T Consensus 7 ~dVvIIGgG~aGlsaA~~La~-----~G~------~~V~vlE~~~~~ 42 (438)
T 3dje_A 7 SSLLIVGAGTWGTSTALHLAR-----RGY------TNVTVLDPYPVP 42 (438)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----cCC------CcEEEEeCCCCC
Confidence 579999999999999988764 464 269999987654
No 289
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=70.59 E-value=3.7 Score=39.44 Aligned_cols=38 Identities=18% Similarity=0.197 Sum_probs=27.1
Q ss_pred eEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.|+|+|||.+|+.+|-.|.+... +. --..++.++|+.-
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~-----~~-~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYH-----SV-LQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHT-----TT-SSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhcc-----cc-CCCceEEEEECCC
Confidence 58999999999999988876530 00 0003799999873
No 290
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=70.56 E-value=1.9 Score=40.67 Aligned_cols=31 Identities=26% Similarity=0.375 Sum_probs=25.8
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
.+|+|+|||.||+..|..|... |+ ++.++|+
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~-----g~-------~v~lie~ 39 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARA-----EL-------KPLLFEG 39 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECC
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEec
Confidence 6899999999999999988653 53 5788887
No 291
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=70.48 E-value=3.5 Score=42.26 Aligned_cols=36 Identities=33% Similarity=0.531 Sum_probs=28.6
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|||+|||.||+..|..+.+... . ..++.++|+..
T Consensus 36 ~dvvIIGaG~aGl~aA~~l~~~g~--~-------~~~V~lie~~~ 71 (490)
T 2bc0_A 36 SKIVVVGANHAGTACIKTMLTNYG--D-------ANEIVVFDQNS 71 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHG--G-------GSEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCC--C-------CCeEEEEECCC
Confidence 689999999999999999877530 0 14788998864
No 292
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=70.44 E-value=2 Score=39.62 Aligned_cols=38 Identities=16% Similarity=0.252 Sum_probs=25.4
Q ss_pred CCCCCCceEEEeCcc---HHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 318 LTDFADQKIVVVGAG---SAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 318 l~dl~~~riv~~GAG---sAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
..++++.++||.||+ ..|.++|+.|.+ .|. +++++|++
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~-----~G~-------~V~~~~r~ 49 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKR-----EGA-------ELAFTYVG 49 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHH-----cCC-------CEEEEecc
Confidence 344556999999984 455556666553 452 68888875
No 293
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=70.43 E-value=2.7 Score=43.16 Aligned_cols=36 Identities=22% Similarity=0.424 Sum_probs=27.9
Q ss_pred CCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 319 TDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 319 ~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
.+++++||+|+|.|.+|+++|++|.+. | -++...|.
T Consensus 5 ~~~~~k~v~viG~G~sG~s~A~~l~~~-----G-------~~V~~~D~ 40 (451)
T 3lk7_A 5 TTFENKKVLVLGLARSGEAAARLLAKL-----G-------AIVTVNDG 40 (451)
T ss_dssp CTTTTCEEEEECCTTTHHHHHHHHHHT-----T-------CEEEEEES
T ss_pred hhcCCCEEEEEeeCHHHHHHHHHHHhC-----C-------CEEEEEeC
Confidence 345669999999999999999888754 4 25666676
No 294
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=70.41 E-value=5.3 Score=39.66 Aligned_cols=104 Identities=20% Similarity=0.317 Sum_probs=63.1
Q ss_pred eEEEeC-ccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCC--CCCHH
Q 011618 325 KIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE--GASLL 401 (481)
Q Consensus 325 riv~~G-AGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~--~~~L~ 401 (481)
||.|+| +|..|..+|.+|... .++- ..+.++|..-. .+ .....+.+-..... ... ..+..
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~----~~~~-----~el~L~Di~~~-~~------G~a~Dl~~~~~~~~-v~~~~~~~~~ 64 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQ----LPSG-----SELSLYDIAPV-TP------GVAVDLSHIPTAVK-IKGFSGEDAT 64 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH----SCTT-----EEEEEECSSTT-HH------HHHHHHHTSCSSEE-EEEECSSCCH
T ss_pred EEEEECCCCHHHHHHHHHHHhC----CCCC-----ceEEEEecCCC-ch------hHHHHhhCCCCCce-EEEecCCCcH
Confidence 899999 799999999877542 2332 57999999641 11 11111211100000 000 12467
Q ss_pred HHhcccCCcEEEeecCCC---CC-----------CCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 402 EVVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 402 e~V~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
++.++ .|++|=+.+.| |- .-+++++.+.+ ++...+|+-.|||..
T Consensus 65 ~~~~~--aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~-~~p~a~vlvvtNPvd 122 (312)
T 3hhp_A 65 PALEG--ADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAK-TCPKACIGIITNPVN 122 (312)
T ss_dssp HHHTT--CSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCTTSEEEECSSCHH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HCCCcEEEEecCcch
Confidence 88888 89988655543 31 12455666654 788889999999986
No 295
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=70.06 E-value=2.4 Score=43.11 Aligned_cols=34 Identities=29% Similarity=0.433 Sum_probs=26.4
Q ss_pred eEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
||||+|||.||+..|..+.+. |.+ -+|.++|+..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~-----g~~-----~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL-----DKE-----SDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-----CSS-----SCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-----CCC-----CcEEEEeCCC
Confidence 799999999999999887643 432 3688888753
No 296
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=70.03 E-value=2.7 Score=43.03 Aligned_cols=37 Identities=22% Similarity=0.319 Sum_probs=27.1
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccce
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 369 (481)
.+|||+|||.||+..|-.|..... .|+ ++.++++.-.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~--~G~-------~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFD--DRI-------DVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHG--GGS-------EEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcC--CCC-------EEEEEecCCC
Confidence 479999999999999999876431 343 6889988643
No 297
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=69.79 E-value=2.9 Score=42.30 Aligned_cols=35 Identities=29% Similarity=0.426 Sum_probs=27.8
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|||+|||.||+..|..|.+. ..| .+|.++|+..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~---~~g-------~~V~vie~~~ 37 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKK---YPQ-------AEISLIDKQA 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---CSS-------SEEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhh---CcC-------CcEEEEECCC
Confidence 4899999999999999988764 113 3788898864
No 298
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=69.75 E-value=2.9 Score=41.74 Aligned_cols=36 Identities=14% Similarity=0.357 Sum_probs=28.4
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccce
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 369 (481)
.+|||+|||.||+..|..|.+ .|.+ .+|.++|+..-
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~-----~g~~-----~~V~li~~~~~ 38 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRA-----EGFE-----GRISLIGDEPH 38 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEEECSSS
T ss_pred CCEEEEcccHHHHHHHHHHHc-----cCcC-----CeEEEEECCCC
Confidence 489999999999999998865 3542 36999988643
No 299
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=69.70 E-value=2.6 Score=48.58 Aligned_cols=34 Identities=18% Similarity=0.399 Sum_probs=30.4
Q ss_pred CceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
+.||+|+|+|..|.-||+.|+.+++ ++|.++|.+
T Consensus 27 ~s~VlIvG~GGlGseiak~La~aGV-----------g~itlvD~D 60 (1015)
T 3cmm_A 27 TSNVLILGLKGLGVEIAKNVVLAGV-----------KSMTVFDPE 60 (1015)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHCC-----------SEEEEECCS
T ss_pred cCEEEEECCChHHHHHHHHHHHcCC-----------CeEEEecCC
Confidence 3999999999999999999998755 699999986
No 300
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=69.70 E-value=2.6 Score=44.46 Aligned_cols=33 Identities=30% Similarity=0.377 Sum_probs=27.8
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~-----~g~-------~v~iiE~~~ 42 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQ-----AGM-------KVLGIEAGE 42 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 789999999999999998864 353 589999874
No 301
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=69.45 E-value=2.8 Score=40.27 Aligned_cols=32 Identities=28% Similarity=0.652 Sum_probs=26.4
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.||.|+|+|..|.+||..+..+ |. +++++|++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~-----G~-------~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT-----GH-------TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 5899999999999999988653 53 68888874
No 302
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=69.41 E-value=2.8 Score=42.74 Aligned_cols=32 Identities=28% Similarity=0.568 Sum_probs=27.1
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 5 ~dVvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (463)
T 2r9z_A 5 FDLIAIGGGSGGLAVAEKAAA-----FG-------KRVALIESK 36 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CcEEEECCCHHHHHHHHHHHh-----CC-------CcEEEEcCC
Confidence 689999999999999988764 34 369999986
No 303
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=69.37 E-value=3.2 Score=41.91 Aligned_cols=32 Identities=28% Similarity=0.422 Sum_probs=26.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 7 ~dvvIIGaG~aGl~aA~~l~~~-----g-------~~V~liE~~ 38 (470)
T 1dxl_A 7 NDVVIIGGGPGGYVAAIKAAQL-----G-------FKTTCIEKR 38 (470)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEeCC
Confidence 6799999999999999887653 4 368999987
No 304
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=69.09 E-value=2.7 Score=39.54 Aligned_cols=32 Identities=28% Similarity=0.488 Sum_probs=24.8
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
=-|+|+|||.||+..|..+.+ .|+ ++.++|+.
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~-----~g~-------~V~liE~~ 38 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASR-----ANL-------KTVMIERG 38 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 358999999999999877653 453 68888874
No 305
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=68.99 E-value=3.6 Score=41.48 Aligned_cols=35 Identities=17% Similarity=0.368 Sum_probs=27.8
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|||+|||.||+..|..|.+.. .| .+|.++|+..
T Consensus 4 ~~VvIIGgG~aGl~aA~~L~~~~---~~-------~~V~vie~~~ 38 (449)
T 3kd9_A 4 KKVVIIGGGAAGMSAASRVKRLK---PE-------WDVKVFEATE 38 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC---TT-------SEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHHhC---cC-------CCEEEEECCC
Confidence 68999999999999999886541 12 3688888865
No 306
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=68.88 E-value=0.95 Score=45.42 Aligned_cols=121 Identities=17% Similarity=0.114 Sum_probs=72.2
Q ss_pred ceEEEeC-ccHHHHHHHHHHHHHHHHHcCCC-hhhhcCeEEEEeccc---eeecCCCCCChhhhccccccCCcCCcCCCC
Q 011618 324 QKIVVVG-AGSAGLGVLKMAVQAAARMAGNN-DAFARNKFFLLDKDG---LITKERKNLDPAAAPFAKDPGDFMGLREGA 398 (481)
Q Consensus 324 ~riv~~G-AGsAg~GiA~ll~~~~~~~~Gls-~eeA~~~i~lvD~~G---Li~~~r~~l~~~k~~fA~~~~~~~~~~~~~ 398 (481)
.||+|.| ||..|..+|.+|+.. |+- +++- -.+.|+|... .+.....+|.+...+|.++. ....
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~-----~~~~e~~~-~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~------~~~~ 71 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNG-----SVFGKDQP-IILVLLDITPMMGVLDGVLMELQDCALPLLKDV------IATD 71 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTT-----TTTCTTCC-EEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEE------EEES
T ss_pred eEEEEECCCCHHHHHHHHHHHhC-----CCccccCC-CEEEEEeCCCccccchhhHhhhHhhhhcccCCE------EEcC
Confidence 5899999 799999999887642 331 1111 1289999852 11111112322222332221 1234
Q ss_pred CHHHHhcccCCcEEEeecCCC---CC-----------CCHHHHHHhhhcCCCCC-EEEecCCCCCCCCCCCCHHHHHhcc
Q 011618 399 SLLEVVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDSVKP-AIFAMSNPTMNGLFSCCVTTFFFYL 463 (481)
Q Consensus 399 ~L~e~V~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~~erP-IIFaLSNPt~~aE~~~t~eda~~wt 463 (481)
++.+++++ .|++|=+.+.| |- ..+++++++.+ ++.+- +|+-.|||.. ....-+++.+
T Consensus 72 ~~~~~~~d--aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~-~~~~~~~vivvsNPvd-----~~t~~~~~~~ 143 (333)
T 5mdh_A 72 KEEIAFKD--LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDK-YAKKSVKVIVVGNPAN-----TNCLTASKSA 143 (333)
T ss_dssp CHHHHTTT--CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHH-HSCTTCEEEECSSSHH-----HHHHHHHHTC
T ss_pred CcHHHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCCeEEEEcCCchH-----HHHHHHHHHc
Confidence 68889988 89988555443 31 34667777754 66666 4888999976 6666777766
Q ss_pred c
Q 011618 464 M 464 (481)
Q Consensus 464 ~ 464 (481)
.
T Consensus 144 ~ 144 (333)
T 5mdh_A 144 P 144 (333)
T ss_dssp T
T ss_pred C
Confidence 4
No 307
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=68.88 E-value=2.8 Score=41.45 Aligned_cols=32 Identities=34% Similarity=0.553 Sum_probs=25.9
Q ss_pred eEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
+|+|+|||.+|+..|..|.+. | .++.++++..
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G-------~~V~vlE~~~ 33 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARN-----G-------HEIIVLEKSA 33 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-----T-------CEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEeCCC
Confidence 799999999999999988653 5 3688888753
No 308
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=68.83 E-value=3.5 Score=40.25 Aligned_cols=48 Identities=23% Similarity=0.376 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 303 ~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
.++..+.|++..+. .. ++|+|+|||..|..++++... .|. ++++.+|+
T Consensus 153 ~~~ta~~~l~~~~~--~g---~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~ 200 (348)
T 2d8a_A 153 PLGNAVDTVLAGPI--SG---KSVLITGAGPLGLLGIAVAKA-----SGA------YPVIVSEP 200 (348)
T ss_dssp HHHHHHHHHTTSCC--TT---CCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECS
T ss_pred HHHHHHHHHHhcCC--CC---CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 33344555543322 44 899999999888887766543 353 35777765
No 309
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=68.78 E-value=3.3 Score=41.19 Aligned_cols=34 Identities=29% Similarity=0.456 Sum_probs=26.8
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
..|+|+|||.+|+.+|..|.+. .-|+ ++.++|+.
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~---~pG~-------~V~vlE~~ 70 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQL---APGR-------SLLLVEEG 70 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH---CTTS-------CEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHhc---CCCC-------eEEEEeCC
Confidence 5799999999999999988753 0143 68889875
No 310
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=68.76 E-value=2.4 Score=40.45 Aligned_cols=32 Identities=22% Similarity=0.413 Sum_probs=25.8
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||.||+..|..+.. .|+ ++.++|+.
T Consensus 15 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 46 (335)
T 2a87_A 15 RDVIVIGSGPAGYTAALYAAR-----AQL-------APLVFEGT 46 (335)
T ss_dssp EEEEEECCHHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEecC
Confidence 689999999999999998764 353 57788854
No 311
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=68.50 E-value=2 Score=40.22 Aligned_cols=32 Identities=25% Similarity=0.385 Sum_probs=25.4
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 37 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAAR-----ANL-------QPVLITGM 37 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CCEEECCS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEccC
Confidence 689999999999999988764 353 56778853
No 312
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=68.50 E-value=3.2 Score=42.94 Aligned_cols=36 Identities=14% Similarity=0.351 Sum_probs=28.1
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccce
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 369 (481)
.+|||+|||.||+..|..|.... .| -+|.++|+..-
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~---~~-------~~V~lie~~~~ 37 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLS---ET-------AEIIMFERGEY 37 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC---SS-------SEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhhC---cC-------CCEEEEECCCC
Confidence 48999999999999999886541 12 37889988754
No 313
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=68.46 E-value=2.9 Score=42.10 Aligned_cols=32 Identities=28% Similarity=0.356 Sum_probs=26.2
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||.||+..|-.|... |+ ++.++|+.
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~-----G~-------~V~viE~~ 54 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQH-----DV-------DVTVYTDR 54 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT-----TC-------EEEEEESC
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----CC-------eEEEEcCC
Confidence 4799999999999999887654 53 68888865
No 314
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=68.44 E-value=4.3 Score=38.95 Aligned_cols=34 Identities=24% Similarity=0.484 Sum_probs=27.6
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.-|+|+|||.||+..|..+.+. +.|+ ++.++|+.
T Consensus 66 ~DV~IIGaGPAGlsAA~~la~~---r~G~-------~V~viEk~ 99 (326)
T 3fpz_A 66 SDVIIVGAGSSGLSAAYVIAKN---RPDL-------KVCIIESS 99 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHH---CTTS-------CEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHh---CCCC-------eEEEEECC
Confidence 6799999999999999888654 3464 68888875
No 315
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=68.42 E-value=3.3 Score=42.53 Aligned_cols=36 Identities=28% Similarity=0.489 Sum_probs=27.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|||+|||.||+..|..+.+.- ..| .++.++|+..
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~--~~G-------~~V~liE~~~ 38 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSH--PET-------TQVTVIDCDG 38 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC--TTT-------EEEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--CCc-------CEEEEEeCCC
Confidence 57999999999999999887540 004 2799999873
No 316
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=68.39 E-value=2.9 Score=43.44 Aligned_cols=33 Identities=18% Similarity=0.253 Sum_probs=27.8
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 44 ~dVvIIGgG~aGl~aA~~l~~~-----G-------~~V~liE~~~ 76 (523)
T 1mo9_A 44 YDAIFIGGGAAGRFGSAYLRAM-----G-------GRQLIVDRWP 76 (523)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeCCC
Confidence 6899999999999999888653 4 3699999875
No 317
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=68.10 E-value=3 Score=41.83 Aligned_cols=36 Identities=22% Similarity=0.359 Sum_probs=28.1
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccce
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 369 (481)
.+|||+|||.||+..|..|... ..| -+|.++|+.--
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~---~~g-------~~Vtlie~~~~ 38 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNL---MPD-------LKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH---CTT-------CEEEEECSSSE
T ss_pred CCEEEECccHHHHHHHHHHHcC---CCC-------CeEEEECCCCC
Confidence 5899999999999999988762 123 37888888643
No 318
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=68.09 E-value=3.1 Score=43.48 Aligned_cols=37 Identities=27% Similarity=0.382 Sum_probs=28.8
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccce
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 369 (481)
.+|||+|||.||+..|..|..... .| -+|.++|+...
T Consensus 26 ~dVvIVGgG~aGl~aA~~La~~~~--~G-------~~V~liE~~~~ 62 (550)
T 2e4g_A 26 DKILIVGGGTAGWMAASYLGKALQ--GT-------ADITLLQAPDI 62 (550)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTT--TS-------SEEEEEECCCC
T ss_pred CcEEEECCCHHHHHHHHHHHhhcC--CC-------CcEEEEeCCCC
Confidence 689999999999999998876420 34 37999998643
No 319
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=67.98 E-value=2.6 Score=43.07 Aligned_cols=32 Identities=28% Similarity=0.510 Sum_probs=27.1
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 12 ~dVvVIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 43 (479)
T 2hqm_A 12 YDYLVIGGGSGGVASARRAAS-----YG-------AKTLLVEAK 43 (479)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TS-------CCEEEEESS
T ss_pred CCEEEEcCCHHHHHHHHHHHH-----CC-------CcEEEEeCC
Confidence 689999999999999998765 35 369999986
No 320
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=67.93 E-value=3.6 Score=44.44 Aligned_cols=33 Identities=27% Similarity=0.461 Sum_probs=27.8
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|||+|||.||+..|..+... | .++.++|+..
T Consensus 392 ~~VvIIGgG~AGl~aA~~La~~-----G-------~~V~liE~~~ 424 (690)
T 3k30_A 392 ARVLVVGAGPSGLEAARALGVR-----G-------YDVVLAEAGR 424 (690)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----T-------CEEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEecCC
Confidence 6899999999999999988754 4 3699999863
No 321
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=67.73 E-value=2.7 Score=42.79 Aligned_cols=34 Identities=29% Similarity=0.537 Sum_probs=27.3
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccce
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 369 (481)
.+|+|+|||.||+..|..+.+ .|. ++.++|+..-
T Consensus 28 ~dViIIGgG~AGl~aA~~La~-----~G~-------~V~llEk~~~ 61 (417)
T 3v76_A 28 QDVVIIGAGAAGMMCAIEAGK-----RGR-------RVLVIDHARA 61 (417)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCCC
Confidence 589999999999999987764 353 6889988653
No 322
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=67.68 E-value=3.7 Score=41.42 Aligned_cols=34 Identities=21% Similarity=0.314 Sum_probs=27.4
Q ss_pred eEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
+|||+|||.||+..|..+.+.. .| .++.++|+..
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~---~g-------~~V~lie~~~ 35 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADH---PD-------ADVTAYEMND 35 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCC
Confidence 6999999999999999987641 13 4789999865
No 323
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=67.57 E-value=3.4 Score=42.43 Aligned_cols=37 Identities=16% Similarity=0.134 Sum_probs=28.1
Q ss_pred ceEEEeCccHHHHHHHHHHHH-HHHH-HcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQ-AAAR-MAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~-~~~~-~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||.||+..|..+.. .... ..| .+|.++|+.
T Consensus 4 ~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g-------~~V~lie~~ 42 (456)
T 1lqt_A 4 YYIAIVGSGPSAFFAAASLLKAADTTEDLD-------MAVDMLEML 42 (456)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCC-------EEEEEEESS
T ss_pred CEEEEECcCHHHHHHHHHHHhhCccccCCC-------CeEEEEecC
Confidence 789999999999999999876 4210 002 368999986
No 324
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=67.55 E-value=3.3 Score=37.07 Aligned_cols=95 Identities=14% Similarity=0.194 Sum_probs=56.4
Q ss_pred ceEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChh-----hhccccccCCcCCcCCC
Q 011618 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPA-----AAPFAKDPGDFMGLREG 397 (481)
Q Consensus 324 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~-----k~~fA~~~~~~~~~~~~ 397 (481)
.+|+|.|| |-.|..+++.|.+ +.| -++++++++.- +.+... ...+..- + ..+.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~----~~g-------~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~--D---~~d~ 64 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLT----YTD-------MHITLYGRQLK-----TRIPPEIIDHERVTVIEG--S---FQNP 64 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHH----HCC-------CEEEEEESSHH-----HHSCHHHHTSTTEEEEEC--C---TTCH
T ss_pred EEEEEEeCCcHHHHHHHHHHHh----cCC-------ceEEEEecCcc-----ccchhhccCCCceEEEEC--C---CCCH
Confidence 35999996 8888888888773 245 26888877411 012111 0011110 0 1123
Q ss_pred CCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEe
Q 011618 398 ASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFA 442 (481)
Q Consensus 398 ~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFa 442 (481)
.++.++++. +|++|=+.+.++.-++.+++.|.+ ..-+-||+.
T Consensus 65 ~~~~~~~~~--~d~vv~~ag~~n~~~~~~~~~~~~-~~~~~iv~i 106 (221)
T 3r6d_A 65 GXLEQAVTN--AEVVFVGAMESGSDMASIVKALSR-XNIRRVIGV 106 (221)
T ss_dssp HHHHHHHTT--CSEEEESCCCCHHHHHHHHHHHHH-TTCCEEEEE
T ss_pred HHHHHHHcC--CCEEEEcCCCCChhHHHHHHHHHh-cCCCeEEEE
Confidence 468888886 899997765432227889999964 444567774
No 325
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=67.50 E-value=3.8 Score=41.24 Aligned_cols=34 Identities=15% Similarity=0.338 Sum_probs=27.3
Q ss_pred eEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
+|||+|||.||+..|..+.+.. .| .++.++|+..
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~ 35 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLH---PD-------AEIQWYEKGD 35 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHC---TT-------SEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHHhC---cC-------CeEEEEECCC
Confidence 6999999999999999887641 13 4799999864
No 326
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=67.36 E-value=4.8 Score=41.49 Aligned_cols=35 Identities=14% Similarity=0.388 Sum_probs=28.1
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|||+|||.||+..|..|.+. ..| .+|.++|+..
T Consensus 12 ~~vvIIGgG~AGl~aA~~L~~~---~~g-------~~V~lie~~~ 46 (493)
T 1m6i_A 12 VPFLLIGGGTAAFAAARSIRAR---DPG-------ARVLIVSEDP 46 (493)
T ss_dssp EEEEEESCSHHHHHHHHHHHHH---STT-------CEEEEEESSS
T ss_pred CCEEEECChHHHHHHHHHHHhc---CCC-------CeEEEEeCCC
Confidence 6899999999999999988654 112 4799999864
No 327
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=67.28 E-value=2.8 Score=44.28 Aligned_cols=33 Identities=30% Similarity=0.367 Sum_probs=27.7
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 54 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRS-----QGL-------TVRAFEAAS 54 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECchHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 789999999999999998864 353 689999854
No 328
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=67.11 E-value=3.4 Score=41.91 Aligned_cols=32 Identities=31% Similarity=0.389 Sum_probs=26.7
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 3 ~dvvIIGgG~aGl~aA~~l~~-----~g~-------~V~lie~~ 34 (468)
T 2qae_A 3 YDVVVIGGGPGGYVASIKAAQ-----LGM-------KTACVEKR 34 (468)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCC
Confidence 689999999999999977754 353 69999987
No 329
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=67.02 E-value=3 Score=42.68 Aligned_cols=33 Identities=27% Similarity=0.445 Sum_probs=27.0
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|+|+|||.||+..|..+.+ .| .++.++|++.
T Consensus 26 ~dVvVIGgG~aGl~aA~~la~-----~G-------~~V~liEk~~ 58 (491)
T 3urh_A 26 YDLIVIGSGPGGYVCAIKAAQ-----LG-------MKVAVVEKRS 58 (491)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEecCC
Confidence 579999999999999988764 35 3689999754
No 330
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=66.73 E-value=3.5 Score=37.75 Aligned_cols=34 Identities=18% Similarity=0.264 Sum_probs=26.4
Q ss_pred CCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 322 ~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
...||.|+|+|..|..+|..+... | .+++++|++
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~-----g-------~~V~~~~~~ 51 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIA-----G-------HEVTYYGSK 51 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEcCC
Confidence 338999999999999999988653 4 268888864
No 331
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=66.73 E-value=2.2 Score=41.02 Aligned_cols=35 Identities=20% Similarity=0.271 Sum_probs=26.3
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||.+|+.+|..|.+.. ..|+ ++.++|+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~--~~G~-------~V~v~Ek~ 36 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQT--SGPL-------YLAVWDKA 36 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC---CCE-------EEEEECSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhc--cCCc-------eEEEEECC
Confidence 47999999999999999886510 0343 68888875
No 332
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=66.58 E-value=3.2 Score=43.06 Aligned_cols=36 Identities=28% Similarity=0.442 Sum_probs=27.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|||+|||.||+..|-.|..... .|+ +|.++|+.-
T Consensus 6 ~dVvIVGgG~aGl~aA~~La~~~~--~G~-------~V~liE~~~ 41 (538)
T 2aqj_A 6 KNIVIVGGGTAGWMAASYLVRALQ--QQA-------NITLIESAA 41 (538)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCC--SSC-------EEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhcC--CCC-------EEEEECCCC
Confidence 689999999999999998865310 353 688999853
No 333
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=66.49 E-value=3.3 Score=41.80 Aligned_cols=33 Identities=30% Similarity=0.429 Sum_probs=26.8
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
-+|+|+|||.||+..|..+.+ .| .++.++|+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g-------~~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQ-----LG-------MKVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 579999999999999987754 35 3699999873
No 334
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=66.48 E-value=3.3 Score=42.05 Aligned_cols=33 Identities=27% Similarity=0.415 Sum_probs=27.3
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|||+|||.||+..|..+.+. |. ++.++|+..
T Consensus 7 ~dvvIIGgG~aGl~aA~~l~~~-----g~-------~V~liE~~~ 39 (474)
T 1zmd_A 7 ADVTVIGSGPGGYVAAIKAAQL-----GF-------KTVCIEKNE 39 (474)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCCC
Confidence 5799999999999999887643 53 699999874
No 335
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=66.43 E-value=3.6 Score=37.72 Aligned_cols=32 Identities=28% Similarity=0.391 Sum_probs=26.2
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||.||+..|..+.+ .| .++.++++.
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~-----~g-------~~v~lie~~ 35 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQ-----KG-------VRVGLLTQS 35 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CC-------CCEEEEecC
Confidence 679999999999999988765 35 368888875
No 336
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=66.04 E-value=3.1 Score=41.98 Aligned_cols=32 Identities=34% Similarity=0.492 Sum_probs=26.4
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~-----~g~-------~V~lie~~ 35 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQ-----LGQ-------KVTIVEKG 35 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 579999999999999987764 353 69999986
No 337
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=66.04 E-value=3.2 Score=41.79 Aligned_cols=37 Identities=22% Similarity=0.453 Sum_probs=28.4
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccce
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 369 (481)
.+|||+|||.||+..|..|...+. .| -+|.++|+.--
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~--~g-------~~Vtlie~~~~ 41 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALG--SG-------HEVTLISANDY 41 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHG--GG-------SEEEEECSSSE
T ss_pred CcEEEECCcHHHHHHHHHHhccCC--Cc-------CEEEEEeCCCC
Confidence 589999999999999999877331 23 36888887643
No 338
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=66.00 E-value=3 Score=38.90 Aligned_cols=32 Identities=22% Similarity=0.407 Sum_probs=24.6
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||.||+..|..+.+ .|+ ++.+++++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~li~~~ 33 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSAR-----KGI-------RTGLMGER 33 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 579999999999999987764 353 56677653
No 339
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=65.86 E-value=2.7 Score=40.07 Aligned_cols=35 Identities=23% Similarity=0.405 Sum_probs=28.0
Q ss_pred CCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 320 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 320 dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
+|++.++||+|+|..|..-++.|..+ | .++.+++.
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~-----G-------A~VtVvap 62 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQE-----G-------AAITVVAP 62 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGG-----C-------CCEEEECS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEECC
Confidence 35559999999999999999888765 3 26777775
No 340
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=65.65 E-value=3.9 Score=42.38 Aligned_cols=33 Identities=33% Similarity=0.448 Sum_probs=27.2
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|+|+|||.||+..|..+.. .|+ ++.++|+..
T Consensus 93 ~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liEk~~ 125 (497)
T 2bry_A 93 TKCLVVGAGPCGLRAAVELAL-----LGA-------RVVLVEKRI 125 (497)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCS
T ss_pred CCEEEECccHHHHHHHHHHHH-----CCC-------eEEEEEecc
Confidence 689999999999999988764 353 688898764
No 341
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=65.56 E-value=2.9 Score=42.45 Aligned_cols=32 Identities=25% Similarity=0.500 Sum_probs=26.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||.||+..|..+.+ .| .++.++|++
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (450)
T 1ges_A 5 YDYIAIGGGSGGIASINRAAM-----YG-------QKCALIEAK 36 (450)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TT-------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEcCC
Confidence 689999999999999988764 34 379999986
No 342
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=65.51 E-value=9.4 Score=37.67 Aligned_cols=47 Identities=23% Similarity=0.350 Sum_probs=30.8
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 305 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
...+.|++..+..... ++|+|.|||..|..++++... .|. +++.+|+
T Consensus 173 ~ta~~al~~~~~~~~g---~~VlV~GaG~vG~~~~q~a~~-----~Ga-------~Vi~~~~ 219 (366)
T 1yqd_A 173 ITVYSPLKYFGLDEPG---KHIGIVGLGGLGHVAVKFAKA-----FGS-------KVTVIST 219 (366)
T ss_dssp HHHHHHHHHTTCCCTT---CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHHHHHHHhcCcCCCC---CEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 3445667666544244 799999999888877766543 342 5777765
No 343
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=65.43 E-value=8.7 Score=36.63 Aligned_cols=108 Identities=14% Similarity=0.174 Sum_probs=59.6
Q ss_pred CCCCCCCceEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecC-CCCCChhhhccccccCCcCCc
Q 011618 317 SLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGL 394 (481)
Q Consensus 317 ~l~dl~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~l~~~k~~fA~~~~~~~~~ 394 (481)
+..++++.+|+|.|| |-.|..+++.|.+ .| -+++.+|+..--... ...+. ...+..- + .
T Consensus 14 ~~~~~~~~~vlVTGasG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~~~~~~~~~l~--~v~~~~~--D---l 74 (330)
T 2pzm_A 14 LVPRGSHMRILITGGAGCLGSNLIEHWLP-----QG-------HEILVIDNFATGKREVLPPVA--GLSVIEG--S---V 74 (330)
T ss_dssp CCSTTTCCEEEEETTTSHHHHHHHHHHGG-----GT-------CEEEEEECCSSSCGGGSCSCT--TEEEEEC--C---T
T ss_pred CcccCCCCEEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCCccchhhhhccC--CceEEEe--e---C
Confidence 344566699999998 7778777777654 34 368888873100000 01110 1111110 0 1
Q ss_pred CCCCCHHHHhcccCCcEEEeecCCCCC-C------------CHHHHHHhhhcCCCCCEEEecC
Q 011618 395 REGASLLEVVRKVKPHVLLGLSGVGGV-F------------NEEVLKAMRESDSVKPAIFAMS 444 (481)
Q Consensus 395 ~~~~~L~e~V~~vkptvLIG~S~~~g~-F------------t~evv~~Ma~~~~erPIIFaLS 444 (481)
.+..++.++++.+++|++|=+.+.... - +..+++++.+ ..-+.|||.=|
T Consensus 75 ~d~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~-~~~~~iV~~SS 136 (330)
T 2pzm_A 75 TDAGLLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASK-AGVKRLLNFQT 136 (330)
T ss_dssp TCHHHHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHH-HTCSEEEEEEE
T ss_pred CCHHHHHHHHhhcCCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHH-cCCCEEEEecC
Confidence 123457788885569999987765332 0 3446666643 34467888533
No 344
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=65.35 E-value=5.9 Score=39.84 Aligned_cols=35 Identities=29% Similarity=0.533 Sum_probs=28.1
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|+|+|||.||+..|..|.+ .|.. .++.++|+..
T Consensus 7 ~dV~IIGaG~aGl~aA~~L~~-----~G~~-----~~V~v~E~~~ 41 (447)
T 2gv8_A 7 RKIAIIGAGPSGLVTAKALLA-----EKAF-----DQVTLFERRG 41 (447)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----TTCC-----SEEEEECSSS
T ss_pred CEEEEECccHHHHHHHHHHHh-----cCCC-----CCeEEEecCC
Confidence 689999999999999988764 4542 2789999863
No 345
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=65.26 E-value=11 Score=37.06 Aligned_cols=33 Identities=21% Similarity=0.388 Sum_probs=24.2
Q ss_pred CceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 323 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
+++|+|.|||..|..+++++... |. +++.+|+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~-----Ga-------~Vi~~~~~ 213 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY-----GL-------EVWMANRR 213 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH-----TC-------EEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 48999999988888777766543 42 67777763
No 346
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=65.22 E-value=4.2 Score=41.56 Aligned_cols=36 Identities=19% Similarity=0.381 Sum_probs=28.4
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccce
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 369 (481)
.+|||+|||.||+..|..+.+.. .| .++.++|+...
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~ 72 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRND---EN-------ANVVTLEKGEI 72 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEECSSSC
T ss_pred ceEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCC
Confidence 57999999999999999886531 13 47999998754
No 347
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=64.71 E-value=15 Score=34.48 Aligned_cols=93 Identities=19% Similarity=0.328 Sum_probs=55.6
Q ss_pred ceEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHH
Q 011618 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (481)
.||+|.|| |-.|..+++.|.+ .| -+++.+++. .+...+. ...+..- + .. ..++.+
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~----~~~~~~~--~~~~~~~--D---l~-~~~~~~ 58 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKN-----DG-------NTPIILTRS----IGNKAIN--DYEYRVS--D---YT-LEDLIN 58 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESC----CC-------CCEEEEC--C---CC-HHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHh-----CC-------CEEEEEeCC----CCcccCC--ceEEEEc--c---cc-HHHHHH
Confidence 58999996 8888888887765 34 368888885 1111122 1111111 0 11 245778
Q ss_pred HhcccCCcEEEeecCCCCC------------CCHHHHHHhhhcCCCCCEEEec
Q 011618 403 VVRKVKPHVLLGLSGVGGV------------FNEEVLKAMRESDSVKPAIFAM 443 (481)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~------------Ft~evv~~Ma~~~~erPIIFaL 443 (481)
++++ +|++|=+.+..+. -|..+++++.+ ..-+.+||.=
T Consensus 59 ~~~~--~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~-~~~~r~v~~S 108 (311)
T 3m2p_A 59 QLND--VDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYE-NNISNIVYAS 108 (311)
T ss_dssp HTTT--CSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHH-TTCCEEEEEE
T ss_pred hhcC--CCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHH-cCCCEEEEEc
Confidence 8884 9999987764332 14677888854 4445588843
No 348
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=64.59 E-value=3.8 Score=41.74 Aligned_cols=33 Identities=24% Similarity=0.418 Sum_probs=27.3
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|||+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 7 ~dvvIIG~G~aG~~aA~~l~~-----~g-------~~V~lie~~~ 39 (464)
T 2eq6_A 7 YDLIVIGTGPGGYHAAIRAAQ-----LG-------LKVLAVEAGE 39 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 689999999999999988854 34 3799999863
No 349
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=64.58 E-value=3.7 Score=42.33 Aligned_cols=33 Identities=27% Similarity=0.535 Sum_probs=27.3
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|||+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~~ 35 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAAR-----HN-------AKVALVEKSR 35 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCEEEECCCHHHHHHHHHHHH-----CC-------CcEEEEeCCC
Confidence 579999999999999988865 34 3699999863
No 350
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=64.48 E-value=3.9 Score=43.75 Aligned_cols=32 Identities=19% Similarity=0.371 Sum_probs=27.0
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||.||+..|-.|.. .|+ ++.++|+.
T Consensus 24 ~DVvIVGgG~AGl~aA~~Lar-----~G~-------~V~LiEr~ 55 (591)
T 3i3l_A 24 SKVAIIGGGPAGSVAGLTLHK-----LGH-------DVTIYERS 55 (591)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHc-----CCC-------CEEEEcCC
Confidence 799999999999999987754 353 68888887
No 351
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=64.48 E-value=10 Score=37.73 Aligned_cols=48 Identities=19% Similarity=0.192 Sum_probs=30.9
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 304 LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
++..+.|++..+.+.. ++|+|+|||..|...+.+.... |. ++++.+|+
T Consensus 171 ~~ta~~al~~~~~~~g----~~VlV~GaG~vG~~aiqlak~~-----Ga------~~Vi~~~~ 218 (398)
T 2dph_A 171 LPTGFHGCVSAGVKPG----SHVYIAGAGPVGRCAAAGARLL-----GA------ACVIVGDQ 218 (398)
T ss_dssp HHHHHHHHHHTTCCTT----CEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEEES
T ss_pred HHHHHHHHHHcCCCCC----CEEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEcC
Confidence 3444556655544333 6999999998888777665432 42 36777775
No 352
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=64.40 E-value=6.3 Score=37.00 Aligned_cols=87 Identities=16% Similarity=0.278 Sum_probs=53.6
Q ss_pred CceEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHH
Q 011618 323 DQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLL 401 (481)
Q Consensus 323 ~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~ 401 (481)
..||+|.|| |-.|..+++.|.+ .|. +++.+++. ..-++ .+..++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~-----~g~-------~v~~~~r~-----~~~D~-----------------~d~~~~~ 48 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQ-----RGD-------VELVLRTR-----DELNL-----------------LDSRAVH 48 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTT-----CTT-------EEEECCCT-----TTCCT-----------------TCHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-----CCC-------eEEEEecC-----ccCCc-----------------cCHHHHH
Confidence 378999996 8888888877754 342 46666543 00011 1223578
Q ss_pred HHhcccCCcEEEeecCCCCC-----------------CCHHHHHHhhhcCCCCCEEEecC
Q 011618 402 EVVRKVKPHVLLGLSGVGGV-----------------FNEEVLKAMRESDSVKPAIFAMS 444 (481)
Q Consensus 402 e~V~~vkptvLIG~S~~~g~-----------------Ft~evv~~Ma~~~~erPIIFaLS 444 (481)
++++.+++|++|=+.+..+. -|..+++++.+ ..-+.+||.=|
T Consensus 49 ~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~SS 107 (321)
T 1e6u_A 49 DFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQ-NDVNKLLFLGS 107 (321)
T ss_dssp HHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH-TTCCEEEEECC
T ss_pred HHHHhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHH-hCCCeEEEEcc
Confidence 88886679999988775431 23456666654 44457888443
No 353
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=64.36 E-value=4.1 Score=41.45 Aligned_cols=32 Identities=34% Similarity=0.617 Sum_probs=26.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||.||+..|..|.++ |. ++.++++.
T Consensus 45 ~~V~IIGAGiaGL~aA~~L~~~-----G~-------~V~VlE~~ 76 (376)
T 2e1m_A 45 KRILIVGAGIAGLVAGDLLTRA-----GH-------DVTILEAN 76 (376)
T ss_dssp CEEEEECCBHHHHHHHHHHHHT-----SC-------EEEEECSC
T ss_pred ceEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEecc
Confidence 7999999999999999988753 53 68888876
No 354
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=63.90 E-value=7.9 Score=34.47 Aligned_cols=96 Identities=18% Similarity=0.222 Sum_probs=55.6
Q ss_pred ceEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHH
Q 011618 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (481)
.||+|.|| |-.|..+++.|.+ .| .+++.++++.- ....+.. ...+..- + ..+..++.+
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~~~~-~~~~~~~--D---l~d~~~~~~ 63 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALN-----RG-------FEVTAVVRHPE---KIKIENE-HLKVKKA--D---VSSLDEVCE 63 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHT-----TT-------CEEEEECSCGG---GCCCCCT-TEEEECC--C---TTCHHHHHH
T ss_pred CEEEEEcCCchHHHHHHHHHHH-----CC-------CEEEEEEcCcc---cchhccC-ceEEEEe--c---CCCHHHHHH
Confidence 58999996 7777777777654 34 37888888521 1112211 1111111 1 112346888
Q ss_pred HhcccCCcEEEeecCCCC----------CCCHHHHHHhhhcCCCCCEEEec
Q 011618 403 VVRKVKPHVLLGLSGVGG----------VFNEEVLKAMRESDSVKPAIFAM 443 (481)
Q Consensus 403 ~V~~vkptvLIG~S~~~g----------~Ft~evv~~Ma~~~~erPIIFaL 443 (481)
+++. +|++|=+.+... ..+..++++|.+ ..-+.+||.=
T Consensus 64 ~~~~--~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~S 111 (227)
T 3dhn_A 64 VCKG--ADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKK-AGVNRFLMVG 111 (227)
T ss_dssp HHTT--CSEEEECCCC------CCSHHHHHHHHHHHHHHH-TTCSEEEEEC
T ss_pred HhcC--CCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHH-hCCCEEEEeC
Confidence 8886 899997765321 125567888864 4445688743
No 355
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=63.85 E-value=3.1 Score=38.76 Aligned_cols=31 Identities=16% Similarity=0.209 Sum_probs=23.7
Q ss_pred eEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.|+|+|||.||+..|..+.. .|+ ++.++|+.
T Consensus 6 DvvIIG~GpAGl~AA~~la~-----~g~-------~v~liE~~ 36 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGR-----SSL-------KPVMYEGF 36 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred cEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 59999999999999866543 454 57788864
No 356
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=63.84 E-value=3.8 Score=42.75 Aligned_cols=33 Identities=30% Similarity=0.501 Sum_probs=27.4
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|+|+|||.||+..|..|.+. |+ ++.++|+..
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~-----G~-------~v~iiE~~~ 49 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLREL-----GR-------SVHVIETAG 49 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHhC-----CC-------CEEEEeCCC
Confidence 6899999999999999888753 54 588898764
No 357
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=63.81 E-value=3.9 Score=42.44 Aligned_cols=32 Identities=31% Similarity=0.468 Sum_probs=25.7
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
..|+|+|||.||+..|-.|.. .|+ ++.++|+.
T Consensus 12 ~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 43 (500)
T 2qa1_A 12 AAVIVVGAGPAGMMLAGELRL-----AGV-------EVVVLERL 43 (500)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCC
Confidence 789999999999999988765 354 46677764
No 358
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=63.73 E-value=4.1 Score=41.31 Aligned_cols=33 Identities=30% Similarity=0.465 Sum_probs=27.2
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|+|+|||.||+..|..+.+ .|+ ++.++|+..
T Consensus 6 ~dVvIIGgG~aGl~aA~~l~~-----~G~-------~V~liE~~~ 38 (478)
T 1v59_A 6 HDVVIIGGGPAGYVAAIKAAQ-----LGF-------NTACVEKRG 38 (478)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEecCC
Confidence 579999999999999988765 353 699999853
No 359
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=63.65 E-value=4.4 Score=40.91 Aligned_cols=36 Identities=25% Similarity=0.364 Sum_probs=28.5
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccce
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 369 (481)
.+|||+|||.||+..|..+.+ .|.+ .+|.++|+..-
T Consensus 5 ~~vvIIGgG~aGl~aA~~l~~-----~g~~-----~~V~lie~~~~ 40 (431)
T 1q1r_A 5 DNVVIVGTGLAGVEVAFGLRA-----SGWE-----GNIRLVGDATV 40 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEECSCCS
T ss_pred CcEEEEcCHHHHHHHHHHHHc-----cCcC-----CCEEEEECCCC
Confidence 689999999999999998764 3542 37999987643
No 360
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=63.55 E-value=3.9 Score=41.42 Aligned_cols=32 Identities=28% Similarity=0.374 Sum_probs=26.4
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 4 ~dvvIIGaG~aGl~aA~~l~~-----~G~-------~V~liE~~ 35 (464)
T 2a8x_A 4 YDVVVLGAGPGGYVAAIRAAQ-----LGL-------STAIVEPK 35 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 579999999999999987754 353 68899986
No 361
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=63.52 E-value=4.3 Score=42.12 Aligned_cols=32 Identities=31% Similarity=0.461 Sum_probs=25.8
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||.+|+..|-.|.. .|+ ++.++|+.
T Consensus 13 ~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 44 (499)
T 2qa2_A 13 ASVIVVGAGPAGLMLAGELRL-----GGV-------DVMVLEQL 44 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 789999999999999988765 354 46677764
No 362
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding protein; HET: PLM; 2.50A {Bacillus subtilis}
Probab=63.36 E-value=4.1 Score=40.74 Aligned_cols=153 Identities=15% Similarity=0.195 Sum_probs=78.9
Q ss_pred CCccccccCChhhHHHHHhcCCCCCeeEEEEecCceeeccCCCCCccccccchhhhhhhhhcCCCCCceecEEeeccCCc
Q 011618 147 PRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNN 226 (481)
Q Consensus 147 prGlyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~Gm~I~iGKl~LY~a~gGI~P~~~LPV~LDvGTnN 226 (481)
|||-.++--|-++ |-.++..+++||||.+.=| |.- +..--||. .+|+.+-+| +
T Consensus 16 ~~~~~~~~~~~~~------~~~~~~Mki~IvTDSt~dL------------~~e----~~~~~~I~---vvPL~v~~~--~ 68 (315)
T 3fys_A 16 PRGSHMASMTGGQ------QMGRGSMNIAVVTDSTAYI------------PKE----MREQHQIH---MIPLQVVFR--E 68 (315)
T ss_dssp ------------------------CCCEEEEEEGGGCC------------CHH----HHHHHTEE---EECCEEECS--S
T ss_pred cCccccccccchh------hhCcCCCcEEEEEECCCCC------------CHH----HHHhCCeE---EEeEEEEEC--C
Confidence 5666655555443 2222335799999988543 111 11122576 888888874 3
Q ss_pred cccccCcccccccccCCChhhhhHhHHHHHHHHHH--hCCce-EEEeecCCCchHHHHHHHHhhc---C--CccccCcch
Q 011618 227 QKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHA--RWPKA-IVQFEDFQMKWAFETLERYRKR---F--CMFNDDIQG 298 (481)
Q Consensus 227 ~~LL~Dp~YlG~r~~R~~g~~Y~~~vdefv~av~~--~~P~~-~IqfEDf~~~naf~iL~ryr~~---~--~~FNDDiQG 298 (481)
+...++- +--.+||.+.+++ ..|+. ....+|| .++ .+++.++ + .++.-
T Consensus 69 ~~Y~D~~---------------di~~~efy~~m~~~~~~p~TSqPs~~~~--~~~---fe~l~~~~~~Ii~I~iSS---- 124 (315)
T 3fys_A 69 ETYREEI---------------ELDWKSFYEEVKKHNELPTTSQPPIGEL--VAL---YEELGKSYDAVISIHLSS---- 124 (315)
T ss_dssp CEEEBTT---------------TBCHHHHHHHHHTTTCCCEEECCCHHHH--HHH---HHHHTTTCSEEEEEESCT----
T ss_pred EEEECCC---------------CCCHHHHHHHHHhCCCCcccCCCCHHHH--HHH---HHHHHhcCCcEEEEeCCC----
Confidence 3333321 1235888888875 45765 5444444 222 2333222 1 22333
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHH--HHHHcCC-Chhhhc
Q 011618 299 TAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQA--AARMAGN-NDAFAR 358 (481)
Q Consensus 299 TaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~--~~~~~Gl-s~eeA~ 358 (481)
.|+|-+++.+.....+.+ .+|-++=..+++.|.+-++..+ |. ++|. |.+|..
T Consensus 125 ----~LSGTy~sA~~Aa~~~~~---~~I~ViDS~~~s~g~g~lv~~Aa~l~-~~G~~s~eeI~ 179 (315)
T 3fys_A 125 ----GISGTFSSAAAADSMVDN---IDVYPFDSEISCLAQGFYALKAAELI-KNGASSPEDII 179 (315)
T ss_dssp ----TTCSHHHHHHHGGGGCSS---CEEEEEECSSCHHHHHHHHHHHHHHH-HTTCCCHHHHH
T ss_pred ----cHhHHHHHHHHHHHhCCC---CCEEEECCchhHHHHHHHHHHHHHHH-HcCCCCHHHHH
Confidence 345556666666665666 7898888877777777666664 44 6899 888654
No 363
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=63.35 E-value=9.6 Score=37.83 Aligned_cols=48 Identities=23% Similarity=0.241 Sum_probs=30.7
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 304 LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
++..+.|++..+.+. . ++|+|+|||..|...+.+... .|. ++|+.+|+
T Consensus 171 ~~ta~~al~~~~~~~-g---~~VlV~GaG~vG~~aiqlAk~-----~Ga------~~Vi~~~~ 218 (398)
T 1kol_A 171 LPTGYHGAVTAGVGP-G---STVYVAGAGPVGLAAAASARL-----LGA------AVVIVGDL 218 (398)
T ss_dssp HHHHHHHHHHTTCCT-T---CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred HHHHHHHHHHcCCCC-C---CEEEEECCcHHHHHHHHHHHH-----CCC------CeEEEEcC
Confidence 444556666544333 3 699999999888877665443 343 46777775
No 364
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=63.29 E-value=4.1 Score=41.41 Aligned_cols=32 Identities=22% Similarity=0.355 Sum_probs=26.2
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|||+|||.||+..|..+.+. | .++.++|+.
T Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~-----g-------~~V~lie~~ 37 (458)
T 1lvl_A 6 TTLLIIGGGPGGYVAAIRAGQL-----G-------IPTVLVEGQ 37 (458)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEccC
Confidence 5799999999999999877653 4 379999983
No 365
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=62.98 E-value=4.1 Score=41.45 Aligned_cols=33 Identities=30% Similarity=0.424 Sum_probs=26.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
..|+|+|||.||+..|..+.+ .|+ ++.++|++.
T Consensus 5 ~DVvVIGgG~aGl~aA~~l~~-----~G~-------~V~liEk~~ 37 (466)
T 3l8k_A 5 YDVVVIGAGGAGYHGAFRLAK-----AKY-------NVLMADPKG 37 (466)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECTTS
T ss_pred ceEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEECCC
Confidence 579999999999999988754 353 699999654
No 366
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=62.97 E-value=5.7 Score=41.80 Aligned_cols=35 Identities=31% Similarity=0.535 Sum_probs=21.1
Q ss_pred CCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
+++.+++|.|||.+|.++|..+.+ .|. +++++++.
T Consensus 362 l~~k~vlV~GaGGig~aia~~L~~-----~G~-------~V~i~~R~ 396 (523)
T 2o7s_A 362 LASKTVVVIGAGGAGKALAYGAKE-----KGA-------KVVIANRT 396 (523)
T ss_dssp ----CEEEECCSHHHHHHHHHHHH-----HCC--------CEEEESS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECC
Confidence 444899999998666666655543 452 57888774
No 367
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=62.93 E-value=13 Score=35.39 Aligned_cols=104 Identities=14% Similarity=0.278 Sum_probs=57.3
Q ss_pred CCCCCceEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCC-CCCCh-hhhccccccCCcCCcC
Q 011618 319 TDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDP-AAAPFAKDPGDFMGLR 395 (481)
Q Consensus 319 ~dl~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~-~k~~fA~~~~~~~~~~ 395 (481)
..++..+|+|.|| |-.|..+++.|.+ .| .+++.+|+.. ... ..+.. .+..+..- + ..
T Consensus 17 ~~~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~l~~~~~~~~~~~--D---l~ 76 (333)
T 2q1w_A 17 RGSHMKKVFITGICGQIGSHIAELLLE-----RG-------DKVVGIDNFA---TGRREHLKDHPNLTFVEG--S---IA 76 (333)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCGGGSCCCTTEEEEEC--C---TT
T ss_pred ecCCCCEEEEeCCccHHHHHHHHHHHH-----CC-------CEEEEEECCC---ccchhhHhhcCCceEEEE--e---CC
Confidence 3344589999996 7778777777664 34 3688888741 110 11111 01111110 1 11
Q ss_pred CCCCHHHHhcccCCcEEEeecCCCCC-------------CCHHHHHHhhhcCCCCCEEEec
Q 011618 396 EGASLLEVVRKVKPHVLLGLSGVGGV-------------FNEEVLKAMRESDSVKPAIFAM 443 (481)
Q Consensus 396 ~~~~L~e~V~~vkptvLIG~S~~~g~-------------Ft~evv~~Ma~~~~erPIIFaL 443 (481)
+..++.++++..++|++|=+.+.... -+..+++++.+ ..-+.|||.=
T Consensus 77 d~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~-~~~~~iV~~S 136 (333)
T 2q1w_A 77 DHALVNQLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKK-NNVGRFVYFQ 136 (333)
T ss_dssp CHHHHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHH-TTCSEEEEEE
T ss_pred CHHHHHHHHhccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHH-hCCCEEEEEC
Confidence 23457788887789999987764332 13456777654 4446788843
No 368
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=62.91 E-value=4 Score=41.76 Aligned_cols=35 Identities=26% Similarity=0.490 Sum_probs=27.7
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccee
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 370 (481)
.+|+|+|||.||+..|..|.+. |. ++.+++++.-+
T Consensus 5 ~~vvIIGaG~aGL~aA~~L~~~-----G~-------~V~vlE~~~~~ 39 (520)
T 1s3e_A 5 CDVVVVGGGISGMAAAKLLHDS-----GL-------NVVVLEARDRV 39 (520)
T ss_dssp CSEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCCCC
Confidence 5899999999999999988753 53 68888876443
No 369
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=62.79 E-value=5 Score=40.64 Aligned_cols=33 Identities=30% Similarity=0.401 Sum_probs=27.2
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
-.|+|+|||.||+..|..+.+. | .++.++|+.-
T Consensus 4 ~DVvVIGgG~aGl~aA~~la~~-----G-------~~V~liEk~~ 36 (476)
T 3lad_A 4 FDVIVIGAGPGGYVAAIKSAQL-----G-------LKTALIEKYK 36 (476)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECCB
T ss_pred CCEEEECcCHHHHHHHHHHHhC-----C-------CEEEEEeCCC
Confidence 5799999999999999888653 5 3689999863
No 370
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=62.67 E-value=3.7 Score=42.37 Aligned_cols=33 Identities=24% Similarity=0.518 Sum_probs=27.0
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
..|+|+|||.||+..|..|.. .|+ ++.++|++-
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~-----~G~-------~v~viEr~~ 38 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLAR-----QGV-------RVLVVERRP 38 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 689999999999999988764 454 588888763
No 371
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=62.55 E-value=4.2 Score=41.79 Aligned_cols=22 Identities=36% Similarity=0.613 Sum_probs=20.0
Q ss_pred ceEEEeCccHHHHHHHHHHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQA 345 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~ 345 (481)
.+|+|+|||.||+..|..|.++
T Consensus 9 ~~VvIIGaG~aGL~AA~~L~~~ 30 (516)
T 1rsg_A 9 KKVIIIGAGIAGLKAASTLHQN 30 (516)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT
T ss_pred CcEEEECCCHHHHHHHHHHHhc
Confidence 6899999999999999998764
No 372
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=62.50 E-value=4.6 Score=41.24 Aligned_cols=32 Identities=22% Similarity=0.464 Sum_probs=26.6
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
..|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 27 ~DVvVIGgG~aGl~aA~~la~-----~G~-------~V~liEk~ 58 (484)
T 3o0h_A 27 FDLFVIGSGSGGVRAARLAGA-----LGK-------RVAIAEEY 58 (484)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CcC-------EEEEEeCC
Confidence 689999999999999988765 353 68999984
No 373
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=62.25 E-value=3 Score=40.65 Aligned_cols=92 Identities=14% Similarity=0.305 Sum_probs=52.2
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
+||-|+|-|..|.++|..|+++ |. +++.+|+. .++ ..+ ++.... ....|+.|+
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~-----G~-------~V~v~dr~----~~~--~~~----l~~~G~-----~~~~s~~e~ 58 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA-----GY-------ELVVWNRT----ASK--AEP----LTKLGA-----TVVENAIDA 58 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEC-------------CT----TTTTTC-----EECSSGGGG
T ss_pred CcEEEEecHHHHHHHHHHHHHC-----CC-------eEEEEeCC----HHH--HHH----HHHcCC-----eEeCCHHHH
Confidence 5899999999999999998764 53 57777762 222 211 221111 123568888
Q ss_pred hcccCCcEEEeecCCC----CCCCHHHHHHhhhcCCCCCEEEecCCCCC
Q 011618 404 VRKVKPHVLLGLSGVG----GVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (481)
Q Consensus 404 V~~vkptvLIG~S~~~----g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 448 (481)
++. .|++|=+-..+ .++..+++..+. +.-||.=+|+=.|
T Consensus 59 ~~~--~dvvi~~l~~~~~~~~v~~~~~~~~~~----~~~iiid~sT~~p 101 (297)
T 4gbj_A 59 ITP--GGIVFSVLADDAAVEELFSMELVEKLG----KDGVHVSMSTISP 101 (297)
T ss_dssp CCT--TCEEEECCSSHHHHHHHSCHHHHHHHC----TTCEEEECSCCCH
T ss_pred Hhc--CCceeeeccchhhHHHHHHHHHHhhcC----CCeEEEECCCCCh
Confidence 877 77777443211 124445555552 4457777776444
No 374
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=62.08 E-value=6.7 Score=43.23 Aligned_cols=32 Identities=19% Similarity=0.453 Sum_probs=26.0
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.||.|+|+|..|.+||..+..+ |. .++++|++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~a-----G~-------~V~l~D~~ 344 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILS-----NY-------PVILKEVN 344 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT-----TC-------CEEEECSS
T ss_pred cEEEEEcCCHhhHHHHHHHHhC-----CC-------EEEEEECC
Confidence 4799999999999999988754 53 57888864
No 375
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=62.08 E-value=4.2 Score=42.06 Aligned_cols=38 Identities=18% Similarity=0.294 Sum_probs=28.5
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHH-------HcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAAR-------MAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~-------~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|||+|||.||+..|-.|....-. ..|+ +|.++++.-
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~-------~V~liE~~~ 52 (526)
T 2pyx_A 8 TEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKL-------NITLIESPD 52 (526)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSC-------EEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhhccccccccCCCCC-------eEEEEeCCC
Confidence 6899999999999999988764310 0353 688888753
No 376
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=62.03 E-value=4.1 Score=41.97 Aligned_cols=33 Identities=24% Similarity=0.539 Sum_probs=27.2
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
..|+|+|||.+|+++|..+.. .|+ ++.++|+..
T Consensus 4 ~DVvIIGgGi~G~~~A~~La~-----~G~-------~V~llE~~~ 36 (501)
T 2qcu_A 4 KDLIVIGGGINGAGIAADAAG-----RGL-------SVLMLEAQD 36 (501)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEECCC
Confidence 579999999999999998765 364 588999863
No 377
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=62.02 E-value=4.6 Score=44.07 Aligned_cols=33 Identities=24% Similarity=0.519 Sum_probs=27.4
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|||+|||.||+..|..+.. .| .++.++|+..
T Consensus 390 ~~VvIIGgGpAGl~aA~~L~~-----~G-------~~Vtlie~~~ 422 (729)
T 1o94_A 390 DSVLIVGAGPSGSEAARVLME-----SG-------YTVHLTDTAE 422 (729)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 689999999999999998865 35 3689999863
No 378
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=61.97 E-value=8.7 Score=34.94 Aligned_cols=99 Identities=18% Similarity=0.255 Sum_probs=56.0
Q ss_pred ceEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHH
Q 011618 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (481)
.+|+|.|| |-.|..+++.|++ .|- -++++++++.- .-..+......+..- + ..+..++.+
T Consensus 24 k~vlVtGatG~iG~~l~~~L~~-----~G~------~~V~~~~R~~~---~~~~~~~~~~~~~~~--D---l~d~~~~~~ 84 (236)
T 3qvo_A 24 KNVLILGAGGQIARHVINQLAD-----KQT------IKQTLFARQPA---KIHKPYPTNSQIIMG--D---VLNHAALKQ 84 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHTT-----CTT------EEEEEEESSGG---GSCSSCCTTEEEEEC--C---TTCHHHHHH
T ss_pred cEEEEEeCCcHHHHHHHHHHHh-----CCC------ceEEEEEcChh---hhcccccCCcEEEEe--c---CCCHHHHHH
Confidence 68999995 7777777777654 341 26777776421 001111111111110 1 112346888
Q ss_pred HhcccCCcEEEeecCCCCC--CCHHHHHHhhhcCCCCCEEEecC
Q 011618 403 VVRKVKPHVLLGLSGVGGV--FNEEVLKAMRESDSVKPAIFAMS 444 (481)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~--Ft~evv~~Ma~~~~erPIIFaLS 444 (481)
+++. .|++|=..+.... -++.+++.|.+ ..-+-|||.=|
T Consensus 85 ~~~~--~D~vv~~a~~~~~~~~~~~~~~~~~~-~~~~~iV~iSS 125 (236)
T 3qvo_A 85 AMQG--QDIVYANLTGEDLDIQANSVIAAMKA-CDVKRLIFVLS 125 (236)
T ss_dssp HHTT--CSEEEEECCSTTHHHHHHHHHHHHHH-TTCCEEEEECC
T ss_pred HhcC--CCEEEEcCCCCchhHHHHHHHHHHHH-cCCCEEEEEec
Confidence 8887 7999966553332 26778999964 44456887444
No 379
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=61.87 E-value=4.6 Score=41.21 Aligned_cols=32 Identities=25% Similarity=0.441 Sum_probs=26.2
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 7 ~dVvIIGaG~aGl~aA~~l~~-----~G~-------~V~liE~~ 38 (482)
T 1ojt_A 7 YDVVVLGGGPGGYSAAFAAAD-----EGL-------KVAIVERY 38 (482)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 579999999999999977654 353 59999984
No 380
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=61.86 E-value=4.6 Score=39.77 Aligned_cols=33 Identities=33% Similarity=0.597 Sum_probs=25.6
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||.||+..|..|.+. |. .++.++++.
T Consensus 7 ~~v~IIGaG~aGl~aA~~L~~~-----g~------~~v~v~E~~ 39 (424)
T 2b9w_A 7 SRIAIIGAGPAGLAAGMYLEQA-----GF------HDYTILERT 39 (424)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TC------CCEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHhC-----CC------CcEEEEECC
Confidence 7899999999999999988653 41 256777664
No 381
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=61.85 E-value=4.6 Score=38.12 Aligned_cols=32 Identities=31% Similarity=0.427 Sum_probs=24.0
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
--++|+|||.||+..|-.+. +.|+ ++.++|+.
T Consensus 7 yDVvIIGaGpAGlsAA~~la-----r~g~-------~v~lie~~ 38 (304)
T 4fk1_A 7 IDCAVIGAGPAGLNASLVLG-----RARK-------QIALFDNN 38 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHH-----HTTC-------CEEEEECS
T ss_pred cCEEEECCCHHHHHHHHHHH-----HCCC-------CEEEEeCC
Confidence 35899999999998875443 3453 68889874
No 382
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=61.81 E-value=5.8 Score=39.77 Aligned_cols=36 Identities=28% Similarity=0.363 Sum_probs=28.2
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccce
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 369 (481)
.+|+|+|||-+|+..|..|.+. |- ..++.++++..-
T Consensus 5 ~~v~IiGaG~~Gl~~A~~L~~~-----g~-----~~~v~v~E~~~~ 40 (475)
T 3lov_A 5 KRLVIVGGGITGLAAAYYAERA-----FP-----DLNITLLEAGER 40 (475)
T ss_dssp CEEEEECCBHHHHHHHHHHHHH-----CT-----TSEEEEECSSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHh-----CC-----CCCEEEEECCCC
Confidence 6899999999999999998764 41 137888888543
No 383
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=61.71 E-value=4.8 Score=40.66 Aligned_cols=32 Identities=31% Similarity=0.490 Sum_probs=25.4
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||.||+..|..|.+. |. ++.++++.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~-----g~-------~v~v~E~~ 71 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVA-----GF-------KTLLLEAR 71 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----CC-------CEEEEeCC
Confidence 5899999999999999888753 53 46666665
No 384
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=61.62 E-value=5.1 Score=41.18 Aligned_cols=34 Identities=26% Similarity=0.430 Sum_probs=27.5
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|+|.||+..|..+... |- ..+|.++|+.
T Consensus 7 ~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~vie~~ 40 (460)
T 1cjc_A 7 PQICVVGSGPAGFYTAQHLLKH-----HS-----RAHVDIYEKQ 40 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----CS-----SCEEEEECSS
T ss_pred ceEEEECcCHHHHHHHHHHHhc-----CC-----CCCEEEEeCC
Confidence 6899999999999999998764 31 1478899876
No 385
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=61.61 E-value=3.6 Score=43.33 Aligned_cols=34 Identities=26% Similarity=0.292 Sum_probs=27.5
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|||+|||.||+..|..|.. +.|+ ++.++|+..
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~----~~G~-------~v~viE~~~ 42 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHH----ELGL-------TTVGFDKAD 42 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHH----TTCC-------CEEEEESSS
T ss_pred CCEEEECcCHHHHHHHHHHHH----cCCC-------CEEEEECCC
Confidence 689999999999999988862 2353 688999853
No 386
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=61.56 E-value=14 Score=35.42 Aligned_cols=34 Identities=18% Similarity=0.304 Sum_probs=24.3
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.||+|+|+|..|-.+++.+.+. .+ +=++.+|+++
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~----~~-------eLva~~d~~~ 37 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEK----GH-------EIVGVIENTP 37 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TC-------EEEEEECSSC
T ss_pred eEEEEECcCHHHHHHHHHHHhC----CC-------EEEEEEecCc
Confidence 5899999999998888776542 11 2356688764
No 387
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=61.54 E-value=18 Score=34.79 Aligned_cols=97 Identities=19% Similarity=0.265 Sum_probs=59.0
Q ss_pred CCceEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChh----hhccccccCCcCCcC-
Q 011618 322 ADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPA----AAPFAKDPGDFMGLR- 395 (481)
Q Consensus 322 ~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~----k~~fA~~~~~~~~~~- 395 (481)
+..+|+|.|| |-.|..+++.|++. .| -+++.+|+.. +.+... ...+..- + ..
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~r~~------~~~~~~~~~~~v~~~~~--D---l~~ 80 (372)
T 3slg_A 23 KAKKVLILGVNGFIGHHLSKRILET----TD-------WEVFGMDMQT------DRLGDLVKHERMHFFEG--D---ITI 80 (372)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHH----SS-------CEEEEEESCC------TTTGGGGGSTTEEEEEC--C---TTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHhC----CC-------CEEEEEeCCh------hhhhhhccCCCeEEEeC--c---cCC
Confidence 3489999996 88898888887653 23 3688888742 112111 1111111 0 11
Q ss_pred CCCCHHHHhcccCCcEEEeecCCCC----------------CCCHHHHHHhhhcCCCCCEEEecC
Q 011618 396 EGASLLEVVRKVKPHVLLGLSGVGG----------------VFNEEVLKAMRESDSVKPAIFAMS 444 (481)
Q Consensus 396 ~~~~L~e~V~~vkptvLIG~S~~~g----------------~Ft~evv~~Ma~~~~erPIIFaLS 444 (481)
+..++.+++++ +|++|=+.+... .-|..+++++.+ .. +.+||.=|
T Consensus 81 d~~~~~~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~-~~-~~~v~~SS 141 (372)
T 3slg_A 81 NKEWVEYHVKK--CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVK-YG-KHLVFPST 141 (372)
T ss_dssp CHHHHHHHHHH--CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHH-HT-CEEEEECC
T ss_pred CHHHHHHHhcc--CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHH-hC-CcEEEeCc
Confidence 23457888886 999997665432 235678888864 44 78888544
No 388
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=61.36 E-value=9.7 Score=37.59 Aligned_cols=32 Identities=28% Similarity=0.501 Sum_probs=23.3
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
++|+|+|||..|...+.+.... |. ++++.+|+
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~~-----Ga------~~Vi~~~~ 226 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKTA-----GA------SRIIGIDI 226 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-----TC------SCEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHc-----CC------CeEEEEcC
Confidence 6999999998887776665433 53 47888774
No 389
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=61.32 E-value=3 Score=39.83 Aligned_cols=32 Identities=25% Similarity=0.406 Sum_probs=26.6
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
..|+|+|||.+|+.+|..|. . | .++.++|+..
T Consensus 10 ~dv~IIGaGi~Gls~A~~La-~-----G-------~~V~vlE~~~ 41 (381)
T 3nyc_A 10 ADYLVIGAGIAGASTGYWLS-A-----H-------GRVVVLEREA 41 (381)
T ss_dssp CSEEEECCSHHHHHHHHHHT-T-----T-------SCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHh-C-----C-------CCEEEEECCC
Confidence 68999999999999998876 2 4 3688999873
No 390
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=61.16 E-value=10 Score=36.50 Aligned_cols=51 Identities=10% Similarity=-0.008 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCceEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 302 VALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 302 V~LAgll~Alr~~g~~l~dl~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
+.++..+.|++....--.. ++++|.|| |..|..+++++.. .| -+++.+|++
T Consensus 128 ~~~~ta~~~l~~~~~~~~g---~~vlV~Ga~ggiG~~~~~~a~~-----~G-------~~Vi~~~~~ 179 (333)
T 1wly_A 128 LKGMTAQYLLHQTHKVKPG---DYVLIHAAAGGMGHIMVPWARH-----LG-------ATVIGTVST 179 (333)
T ss_dssp HHHHHHHHHHHTTSCCCTT---CEEEETTTTSTTHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred hhHHHHHHHHHHhhCCCCC---CEEEEECCccHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 3444455566433322234 79999996 8888888777654 34 257777763
No 391
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=60.88 E-value=6.4 Score=39.79 Aligned_cols=32 Identities=34% Similarity=0.596 Sum_probs=26.1
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||.+|+..|..|.+. | .++.++++.
T Consensus 34 ~~v~IiGaG~~Gl~aA~~l~~~-----g-------~~v~vlE~~ 65 (498)
T 2iid_A 34 KHVVIVGAGMAGLSAAYVLAGA-----G-------HQVTVLEAS 65 (498)
T ss_dssp CEEEEECCBHHHHHHHHHHHHH-----T-------CEEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECC
Confidence 6899999999999999988764 4 357777765
No 392
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=60.85 E-value=8.4 Score=35.72 Aligned_cols=96 Identities=16% Similarity=0.183 Sum_probs=55.4
Q ss_pred eEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 325 KIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 325 riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
||+|.|| |-.|..+++.|.+. .| .+++.++++.- ....+......+.+- ++ .+..+|.++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~R~~~---~~~~~~~~~v~~~~~--D~---~d~~~l~~~ 62 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIAN----HI-------DHFHIGVRNVE---KVPDDWRGKVSVRQL--DY---FNQESMVEA 62 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHT----TC-------TTEEEEESSGG---GSCGGGBTTBEEEEC--CT---TCHHHHHHH
T ss_pred EEEEEcCCchHHHHHHHHHhhC----CC-------CcEEEEECCHH---HHHHhhhCCCEEEEc--CC---CCHHHHHHH
Confidence 6999997 88888888885431 24 35777776421 001111111111111 11 123468889
Q ss_pred hcccCCcEEEeecCCCC------CCCHHHHHHhhhcCCCCCEEEe
Q 011618 404 VRKVKPHVLLGLSGVGG------VFNEEVLKAMRESDSVKPAIFA 442 (481)
Q Consensus 404 V~~vkptvLIG~S~~~g------~Ft~evv~~Ma~~~~erPIIFa 442 (481)
+++ +|++|=+++... .-++.++++|.+ ..-+.|||.
T Consensus 63 ~~~--~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~-~gv~~iv~~ 104 (289)
T 3e48_A 63 FKG--MDTVVFIPSIIHPSFKRIPEVENLVYAAKQ-SGVAHIIFI 104 (289)
T ss_dssp TTT--CSEEEECCCCCCSHHHHHHHHHHHHHHHHH-TTCCEEEEE
T ss_pred HhC--CCEEEEeCCCCccchhhHHHHHHHHHHHHH-cCCCEEEEE
Confidence 987 799998776432 135678888864 445678874
No 393
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=60.76 E-value=3.8 Score=40.30 Aligned_cols=35 Identities=31% Similarity=0.593 Sum_probs=28.6
Q ss_pred CCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
|++.+|||+|+|..|..-++.|+.+ | .++.++|.+
T Consensus 11 l~~k~VLVVGgG~va~rka~~Ll~~-----G-------a~VtViap~ 45 (274)
T 1kyq_A 11 LKDKRILLIGGGEVGLTRLYKLMPT-----G-------CKLTLVSPD 45 (274)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGG-----T-------CEEEEEEEE
T ss_pred cCCCEEEEECCcHHHHHHHHHHHhC-----C-------CEEEEEcCC
Confidence 4559999999999999999998765 3 368888864
No 394
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=60.75 E-value=4.2 Score=38.55 Aligned_cols=34 Identities=29% Similarity=0.432 Sum_probs=26.6
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
..|+|+|||.||+..|..+.+. .|+ ++.++|+..
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~----~G~-------~V~viEk~~ 73 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKN----PNV-------QVAIIEQSV 73 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTS----TTS-------CEEEEESSS
T ss_pred cCEEEECccHHHHHHHHHHHHc----CCC-------eEEEEECCC
Confidence 6899999999999999877541 143 688888764
No 395
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=60.69 E-value=8.4 Score=35.74 Aligned_cols=94 Identities=18% Similarity=0.280 Sum_probs=54.1
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhcccc-ccCCcCCcCCCCCHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAK-DPGDFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~-~~~~~~~~~~~~~L~e 402 (481)
.||+|.|||-.|..+++.|.+ .| -+++.++++. +.+... ..+.. +- .+..++.+
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~-----~g-------~~V~~~~r~~------~~~~~~-~~~~~~Dl------~d~~~~~~ 58 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTA-----QG-------HEVTGLRRSA------QPMPAG-VQTLIADV------TRPDTLAS 58 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECTT------SCCCTT-CCEEECCT------TCGGGCTT
T ss_pred CcEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCCc------cccccC-CceEEccC------CChHHHHH
Confidence 689999999888888887765 34 2677777641 112111 11111 11 12234566
Q ss_pred HhcccCCcEEEeecCCCC-----------CCCHHHHHHhhhcCCCCCEEEecC
Q 011618 403 VVRKVKPHVLLGLSGVGG-----------VFNEEVLKAMRESDSVKPAIFAMS 444 (481)
Q Consensus 403 ~V~~vkptvLIG~S~~~g-----------~Ft~evv~~Ma~~~~erPIIFaLS 444 (481)
+++. ++|++|=+.+... ..|..+++++.+ ..-+.+||.=|
T Consensus 59 ~~~~-~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~-~~~~~~v~~SS 109 (286)
T 3gpi_A 59 IVHL-RPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEG-APLQHVFFVSS 109 (286)
T ss_dssp GGGG-CCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTT-SCCCEEEEEEE
T ss_pred hhcC-CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhh-CCCCEEEEEcc
Confidence 6664 6999996654211 025677887753 44456887433
No 396
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=60.49 E-value=5.3 Score=39.97 Aligned_cols=22 Identities=27% Similarity=0.421 Sum_probs=19.7
Q ss_pred ceEEEeCccHHHHHHHHHHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQA 345 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~ 345 (481)
.+|+|+|||.||+..|..|.+.
T Consensus 8 ~~v~IiGaG~~Gl~aA~~L~~~ 29 (399)
T 1v0j_A 8 FDLFVVGSGFFGLTIAERVATQ 29 (399)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHh
Confidence 6899999999999999988753
No 397
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=60.45 E-value=8.4 Score=38.65 Aligned_cols=22 Identities=41% Similarity=0.653 Sum_probs=19.1
Q ss_pred ceEEEeCccHHHHHHHHHHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQA 345 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~ 345 (481)
.-|||+|||-||+..|..|.++
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~ 32 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQI 32 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhh
Confidence 4699999999999999988653
No 398
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=60.41 E-value=4 Score=42.10 Aligned_cols=33 Identities=21% Similarity=0.590 Sum_probs=26.7
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|+|+|||.||+..|-.|.. .|+ ++.++|+.-
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAM-----RGH-------RVLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEccCC
Confidence 689999999999999987754 454 588888874
No 399
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=60.41 E-value=4.6 Score=40.88 Aligned_cols=33 Identities=33% Similarity=0.575 Sum_probs=26.7
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
..|+|+|||.||+..|-.+.+ .|. ++.++|+..
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~-----~G~-------~V~llEk~~ 59 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAE-----EGA-------NVLLLDKGN 59 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 579999999999999987754 353 689999764
No 400
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=60.32 E-value=4.2 Score=37.83 Aligned_cols=35 Identities=17% Similarity=0.407 Sum_probs=23.5
Q ss_pred CCCceEEEeCcc---HHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 321 FADQKIVVVGAG---SAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 321 l~~~riv~~GAG---sAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
|++.++||-||+ -.|..+|+.|.+ .|. +++++|++
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~-----~G~-------~V~~~~r~ 44 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHR-----EGA-------ELAFTYQN 44 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHH-----CCC-------EEEEEcCc
Confidence 344899999984 455566666543 452 68888875
No 401
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=60.05 E-value=11 Score=36.67 Aligned_cols=56 Identities=18% Similarity=0.216 Sum_probs=33.9
Q ss_pred hhHHHHHHHHHHHH-HHhCCCCCCCCCceEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 298 GTAGVALAGLLGTV-RAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 298 GTaaV~LAgll~Al-r~~g~~l~dl~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
++-.+.++..+.|+ +..+.+-. ..++++|.|| |..|..+++++.. .|. ++++.+|+
T Consensus 137 a~l~~~~~ta~~al~~~~~~~~g--~~~~vlI~GasggiG~~~~~~a~~-----~Ga------~~Vi~~~~ 194 (357)
T 2zb4_A 137 GAIGMPGLTSLIGIQEKGHITAG--SNKTMVVSGAAGACGSVAGQIGHF-----LGC------SRVVGICG 194 (357)
T ss_dssp TTTSHHHHHHHHHHHHHSCCCTT--SCCEEEESSTTBHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred HhcccHHHHHHHHHHHhcCCCCC--CccEEEEECCCcHHHHHHHHHHHH-----CCC------CeEEEEeC
Confidence 33334455556666 44444333 0049999998 8888887776654 353 36777776
No 402
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=59.98 E-value=29 Score=32.48 Aligned_cols=77 Identities=25% Similarity=0.338 Sum_probs=40.9
Q ss_pred CCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCC
Q 011618 319 TDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGA 398 (481)
Q Consensus 319 ~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~ 398 (481)
.+++++++||-||++ ||...|+..+. ++|. +++++|++. +.+......+.-|. .+..
T Consensus 10 ~~~~~k~vlVTGas~---GIG~aia~~l~-~~G~-------~V~~~~r~~------~~~~~~~~~~~~Dv------~~~~ 66 (269)
T 3vtz_A 10 EEFTDKVAIVTGGSS---GIGLAVVDALV-RYGA-------KVVSVSLDE------KSDVNVSDHFKIDV------TNEE 66 (269)
T ss_dssp CTTTTCEEEESSTTS---HHHHHHHHHHH-HTTC-------EEEEEESCC--------CTTSSEEEECCT------TCHH
T ss_pred cCCCCCEEEEeCCCC---HHHHHHHHHHH-HCCC-------EEEEEeCCc------hhccCceeEEEecC------CCHH
Confidence 344559999999853 44444555555 4563 688887642 11111111111121 1223
Q ss_pred CHHHHhccc-----CCcEEEeecCC
Q 011618 399 SLLEVVRKV-----KPHVLLGLSGV 418 (481)
Q Consensus 399 ~L~e~V~~v-----kptvLIG~S~~ 418 (481)
++.++++.+ ++|+||=..+.
T Consensus 67 ~v~~~~~~~~~~~g~iD~lv~nAg~ 91 (269)
T 3vtz_A 67 EVKEAVEKTTKKYGRIDILVNNAGI 91 (269)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCc
Confidence 456666654 79999976654
No 403
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=59.84 E-value=4.7 Score=40.94 Aligned_cols=33 Identities=24% Similarity=0.464 Sum_probs=26.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|+|+|||.||+..|..+.+. |+ ++.++|++-
T Consensus 21 ~dVvIIGgG~aGl~aA~~la~~-----G~-------~V~liE~~~ 53 (478)
T 3dk9_A 21 YDYLVIGGGSGGLASARRAAEL-----GA-------RAAVVESHK 53 (478)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEecCC
Confidence 5799999999999999887653 53 688999653
No 404
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=59.46 E-value=11 Score=36.27 Aligned_cols=99 Identities=17% Similarity=0.324 Sum_probs=58.2
Q ss_pred ceEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhc----cccccCCc-CC-cCC
Q 011618 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAP----FAKDPGDF-MG-LRE 396 (481)
Q Consensus 324 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~----fA~~~~~~-~~-~~~ 396 (481)
.+|+|.|| |-.|..|++.|++ .| .+++.++++. ...+.+.. +....-++ .+ ..+
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~-----~g-------~~V~~l~R~~-------~~~~~~~~~~~~l~~~~v~~~~~Dl~d 71 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLD-----AH-------RPTYILARPG-------PRSPSKAKIFKALEDKGAIIVYGLINE 71 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHH-----TT-------CCEEEEECSS-------CCCHHHHHHHHHHHHTTCEEEECCTTC
T ss_pred CeEEEECCCcHHHHHHHHHHHH-----CC-------CCEEEEECCC-------CCChhHHHHHHHHHhCCcEEEEeecCC
Confidence 69999999 8888888887764 34 2588877752 01111111 11110000 00 113
Q ss_pred CCCHHHHhcccCCcEEEeecCCCCC-CCHHHHHHhhhcCCCCCEEE
Q 011618 397 GASLLEVVRKVKPHVLLGLSGVGGV-FNEEVLKAMRESDSVKPAIF 441 (481)
Q Consensus 397 ~~~L~e~V~~vkptvLIG~S~~~g~-Ft~evv~~Ma~~~~erPIIF 441 (481)
..+|.++++..++|++|=+.+.... -+..+++++.+..+-+-+|+
T Consensus 72 ~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 72 QEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp HHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred HHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 3568899985569999988765333 36788888865331344554
No 405
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=59.31 E-value=4.8 Score=40.59 Aligned_cols=22 Identities=32% Similarity=0.418 Sum_probs=18.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQA 345 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~ 345 (481)
.+|||+|||-+|+..|..|.++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~ 23 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAA 23 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT
T ss_pred CCEEEECCcHHHHHHHHHHHHC
Confidence 4799999999999999887653
No 406
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=59.21 E-value=7 Score=36.44 Aligned_cols=98 Identities=14% Similarity=0.168 Sum_probs=55.8
Q ss_pred ceEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHH
Q 011618 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (481)
.+|+|.|| |-.|..+++.|.+. ..| .+++.+|++. ....+. ....+..- + ..+..++.+
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~~-~~~~~~~~--D---~~d~~~~~~ 62 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKL---YGT-------ENVIASDIRK----LNTDVV-NSGPFEVV--N---ALDFNQIEH 62 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHH---HCG-------GGEEEEESCC----CSCHHH-HSSCEEEC--C---TTCHHHHHH
T ss_pred ceEEEECCccHHHHHHHHHHHHh---CCC-------CEEEEEcCCC----cccccc-CCCceEEe--c---CCCHHHHHH
Confidence 58999998 88888888887753 012 2688887641 111000 00111110 1 012345788
Q ss_pred HhcccCCcEEEeecCCCCC---------------CCHHHHHHhhhcCCCCCEEEe
Q 011618 403 VVRKVKPHVLLGLSGVGGV---------------FNEEVLKAMRESDSVKPAIFA 442 (481)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~---------------Ft~evv~~Ma~~~~erPIIFa 442 (481)
+++..++|++|=+.+.... -|..+++++.+ ..-+.+||.
T Consensus 63 ~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~ 116 (312)
T 2yy7_A 63 LVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKA-KKIKKIFWP 116 (312)
T ss_dssp HHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHT-TSCSEEECC
T ss_pred HHhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHH-cCCCEEEEe
Confidence 8886679999988764321 13356677643 444567874
No 407
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=59.17 E-value=5.4 Score=36.20 Aligned_cols=98 Identities=13% Similarity=0.142 Sum_probs=52.3
Q ss_pred eEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCc-CCCCCHHHH
Q 011618 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGL-REGASLLEV 403 (481)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~-~~~~~L~e~ 403 (481)
||+|+|+|..|..+|+.|... | ..+.++|++- +.+......+ ...-..+. .+...|.++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-----g-------~~v~vid~~~------~~~~~l~~~~--~~~~i~gd~~~~~~l~~a 61 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-----K-------YGVVIINKDR------ELCEEFAKKL--KATIIHGDGSHKEILRDA 61 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-----T-------CCEEEEESCH------HHHHHHHHHS--SSEEEESCTTSHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECCH------HHHHHHHHHc--CCeEEEcCCCCHHHHHhc
Confidence 799999999999999988653 4 3688888631 1111111100 00000000 112235555
Q ss_pred -hcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCC
Q 011618 404 -VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNP 446 (481)
Q Consensus 404 -V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNP 446 (481)
++. ++++|-+.. .-.....+..++++.+..+-|++..|-
T Consensus 62 ~i~~--ad~vi~~~~--~d~~n~~~~~~a~~~~~~~~iia~~~~ 101 (218)
T 3l4b_C 62 EVSK--NDVVVILTP--RDEVNLFIAQLVMKDFGVKRVVSLVND 101 (218)
T ss_dssp TCCT--TCEEEECCS--CHHHHHHHHHHHHHTSCCCEEEECCCS
T ss_pred Cccc--CCEEEEecC--CcHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 554 899986654 222333444454444566666666553
No 408
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=59.14 E-value=4.7 Score=40.61 Aligned_cols=33 Identities=24% Similarity=0.432 Sum_probs=26.8
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|+|+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 5 ~dViIIGgG~aGl~aA~~la~-----~G~-------~V~vlEk~~ 37 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAK-----LGK-------SVTVFDNGK 37 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 579999999999999987764 353 688999864
No 409
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=59.12 E-value=5.8 Score=38.58 Aligned_cols=99 Identities=18% Similarity=0.239 Sum_probs=57.0
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhcccc---ccCCcCCcCCCCCH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAK---DPGDFMGLREGASL 400 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~---~~~~~~~~~~~~~L 400 (481)
.||.|+|+|+.|..+|..|..+ | .+++++|+..- .....++.-.+ +.... +..-..++
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~-----G-------~~V~~~~r~~~------~~~~l~~~g~~~~~~~~~~-~~~~~~~~ 75 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHEN-----G-------EEVILWARRKE------IVDLINVSHTSPYVEESKI-TVRATNDL 75 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSHH------HHHHHHHHSCBTTBTTCCC-CSEEESCG
T ss_pred CcEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCCHH------HHHHHHHhCCcccCCCCee-eEEEeCCH
Confidence 7999999999999999988754 4 36888887411 01111110000 00000 00112356
Q ss_pred HHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCCCCC
Q 011618 401 LEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMN 449 (481)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~ 449 (481)
.| ++. +|++| ++. +....+++++.++. +..+|..++|..+.
T Consensus 76 ~~-~~~--aDvVi-l~v-k~~~~~~v~~~l~~---~~~~vv~~~nGi~~ 116 (335)
T 1z82_A 76 EE-IKK--EDILV-IAI-PVQYIREHLLRLPV---KPSMVLNLSKGIEI 116 (335)
T ss_dssp GG-CCT--TEEEE-ECS-CGGGHHHHHTTCSS---CCSEEEECCCCCCT
T ss_pred HH-hcC--CCEEE-EEC-CHHHHHHHHHHhCc---CCCEEEEEeCCCCC
Confidence 66 655 78766 332 34667777777642 55678889997654
No 410
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=59.02 E-value=5.1 Score=42.93 Aligned_cols=33 Identities=18% Similarity=0.228 Sum_probs=27.3
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
..|+|+|||.||+.+|..|.+ .| .++.++|+..
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~-----~G-------~~V~vlEk~~ 305 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLR-----RG-------WQVTLYCADE 305 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----TT-------CEEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 589999999999999988764 45 3799999853
No 411
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=58.96 E-value=5.4 Score=39.51 Aligned_cols=32 Identities=22% Similarity=0.380 Sum_probs=26.6
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.||.|+|+|..|.+||..+..+ |. +++++|++
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~-----G~-------~V~l~d~~ 38 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIE 38 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSC
T ss_pred ceEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 6899999999999999998754 54 58888874
No 412
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=58.72 E-value=21 Score=34.56 Aligned_cols=90 Identities=18% Similarity=0.122 Sum_probs=51.4
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
.||.|+|+|..|...++.+.. ..+. +-+.++|++ .+..+.+++.... ....++.|+
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~----~~~~------~l~av~d~~----------~~~~~~~a~~~g~----~~~~~~~~~ 60 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAA----NPDL------ELVVIADPF----------IEGAQRLAEANGA----EAVASPDEV 60 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHH----CTTE------EEEEEECSS----------HHHHHHHHHTTTC----EEESSHHHH
T ss_pred eEEEEECCcHHHHHHHHHHHh----CCCc------EEEEEECCC----------HHHHHHHHHHcCC----ceeCCHHHH
Confidence 699999999988776665443 1121 123356652 1112233432111 235689999
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEE
Q 011618 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIF 441 (481)
Q Consensus 404 V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIF 441 (481)
++..++|+++ +++ |.....+++....+ ..++|+.
T Consensus 61 l~~~~~D~V~-i~t-p~~~h~~~~~~al~--~gk~v~~ 94 (344)
T 3euw_A 61 FARDDIDGIV-IGS-PTSTHVDLITRAVE--RGIPALC 94 (344)
T ss_dssp TTCSCCCEEE-ECS-CGGGHHHHHHHHHH--TTCCEEE
T ss_pred hcCCCCCEEE-EeC-CchhhHHHHHHHHH--cCCcEEE
Confidence 9977799888 444 45555565555433 3456553
No 413
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=58.69 E-value=5.2 Score=42.96 Aligned_cols=33 Identities=36% Similarity=0.567 Sum_probs=27.3
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|||+|||.||+..|..+.. .| .++.++|+..
T Consensus 374 ~~vvIIGgG~AGl~aA~~l~~-----~g-------~~V~lie~~~ 406 (671)
T 1ps9_A 374 KNLAVVGAGPAGLAFAINAAA-----RG-------HQVTLFDAHS 406 (671)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----TT-------CEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCCC
Confidence 689999999999999988764 34 3699999864
No 414
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=58.63 E-value=5.4 Score=39.61 Aligned_cols=33 Identities=24% Similarity=0.477 Sum_probs=26.4
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|+|+|||.||+..|..|.+. |. ++.+++++.
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~-----g~-------~v~v~E~~~ 38 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKA-----GL-------SVAVIEARD 38 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEECCC
Confidence 6899999999999999988653 43 577787753
No 415
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=58.57 E-value=5 Score=41.62 Aligned_cols=22 Identities=27% Similarity=0.369 Sum_probs=19.3
Q ss_pred EEEeCccHHHHHHHHHHHHHHH
Q 011618 326 IVVVGAGSAGLGVLKMAVQAAA 347 (481)
Q Consensus 326 iv~~GAGsAg~GiA~ll~~~~~ 347 (481)
||++|||.+|+++|-.|.+...
T Consensus 42 vi~IGaGp~gLa~A~~L~~~~~ 63 (501)
T 4b63_A 42 LLCVGFGPASLAIAIALHDALD 63 (501)
T ss_dssp EEEECCSHHHHHHHHHHHHHHC
T ss_pred EEEEcccHHHHHHHHHHHhcCC
Confidence 8999999999999988877653
No 416
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=58.21 E-value=4.8 Score=39.60 Aligned_cols=34 Identities=18% Similarity=0.431 Sum_probs=25.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|||+|||.||+..|..+.+ .|.+ -+|.++|++
T Consensus 5 ~dvvIIG~G~aGl~aA~~l~~-----~g~~-----~~V~lie~~ 38 (384)
T 2v3a_A 5 APLVIIGTGLAGYNLAREWRK-----LDGE-----TPLLMITAD 38 (384)
T ss_dssp CCEEEECCSHHHHHHHHHHHT-----TCSS-----SCEEEECSS
T ss_pred CcEEEECChHHHHHHHHHHHh-----hCCC-----CCEEEEECC
Confidence 689999999999999988754 3532 257777764
No 417
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=58.21 E-value=15 Score=36.07 Aligned_cols=32 Identities=31% Similarity=0.430 Sum_probs=22.8
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
++|+|+|||+.|...+.+.... |. ++++.+|+
T Consensus 192 ~~VlV~GaG~vG~~a~qlak~~-----Ga------~~Vi~~~~ 223 (371)
T 1f8f_A 192 SSFVTWGAGAVGLSALLAAKVC-----GA------SIIIAVDI 223 (371)
T ss_dssp CEEEEESCSHHHHHHHHHHHHH-----TC------SEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHc-----CC------CeEEEECC
Confidence 6999999998888777665432 42 36777775
No 418
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=58.02 E-value=4.8 Score=43.38 Aligned_cols=32 Identities=19% Similarity=0.213 Sum_probs=26.7
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
..|+|+|||.||+.+|..|.+ .|. ++.++|+.
T Consensus 265 ~DVvIIGgGiaGlsaA~~La~-----~G~-------~V~vlEk~ 296 (689)
T 3pvc_A 265 DDIAIIGGGIVSALTALALQR-----RGA-------VVTLYCAD 296 (689)
T ss_dssp SSEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 689999999999999987764 453 69999985
No 419
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=57.99 E-value=14 Score=35.64 Aligned_cols=40 Identities=18% Similarity=0.159 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCceEEEeCc-cHHHHHHHHHHHH
Q 011618 302 VALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQ 344 (481)
Q Consensus 302 V~LAgll~Alr~~g~~l~dl~~~riv~~GA-GsAg~GiA~ll~~ 344 (481)
+.++..+.|+.....--.. ++|+|.|| |..|..+++++..
T Consensus 132 ~~~~tA~~al~~~~~~~~g---~~vlI~Ga~g~iG~~~~~~a~~ 172 (336)
T 4b7c_A 132 MTGMTAYFALLDVGQPKNG---ETVVISGAAGAVGSVAGQIARL 172 (336)
T ss_dssp HHHHHHHHHHHHTTCCCTT---CEEEESSTTSHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhcCCCCC---CEEEEECCCCHHHHHHHHHHHH
Confidence 4455556666333332234 69999999 8888887766653
No 420
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=57.89 E-value=5.4 Score=41.70 Aligned_cols=32 Identities=9% Similarity=0.364 Sum_probs=26.0
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
..|+|+|||.||+..|-.|.. .|+ ++.++|+.
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~-----~G~-------~V~vlEr~ 58 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAH-----RQV-------GHLVVEQT 58 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCC
Confidence 579999999999999988765 354 57788875
No 421
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=57.85 E-value=12 Score=38.95 Aligned_cols=32 Identities=28% Similarity=0.418 Sum_probs=26.7
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.||.|+|+|..|+.+|..+.+. | -+++++|++
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~-----G-------~~V~~~D~~ 40 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDF-----G-------HEVVCVDKD 40 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred eEEEEEcCCHHHHHHHHHHHHC-----C-------CEEEEEeCC
Confidence 7999999999999999988764 4 368888874
No 422
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=57.80 E-value=6.3 Score=39.97 Aligned_cols=30 Identities=30% Similarity=0.380 Sum_probs=24.4
Q ss_pred eEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
||.|+|+|..|..+|..+.+ | .+++++|++
T Consensus 2 kI~VIG~G~vG~~~A~~La~------G-------~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL------Q-------NEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT------T-------SEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC------C-------CEEEEEECC
Confidence 79999999999999887753 3 368888874
No 423
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=57.76 E-value=5.8 Score=39.60 Aligned_cols=33 Identities=27% Similarity=0.551 Sum_probs=26.5
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|+|+|||.+|+..|..|.+. | .++.++++..
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~-----g-------~~v~v~E~~~ 36 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEK-----G-------HQVHIIDQRD 36 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----T-------CEEEEEESSS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----C-------CcEEEEEecC
Confidence 6899999999999999888642 4 3688888753
No 424
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=57.72 E-value=12 Score=39.78 Aligned_cols=100 Identities=9% Similarity=0.209 Sum_probs=57.2
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCCh-hhhccccccCCcCCcCCCCC-HH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDP-AAAPFAKDPGDFMGLREGAS-LL 401 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~-~k~~fA~~~~~~~~~~~~~~-L~ 401 (481)
.||||+|||+.|-+||.+|.+- .++.. .+|.+.|+.-- +.++.+ ....+.... ... .+... |.
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~----~dv~~----~~I~vaD~~~~----~~~~~~~~g~~~~~~~--Vda-dnv~~~l~ 78 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEK----FDIKP----SQVTIIAAEGT----KVDVAQQYGVSFKLQQ--ITP-QNYLEVIG 78 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH----BCCCG----GGEEEEESSCC----SCCHHHHHTCEEEECC--CCT-TTHHHHTG
T ss_pred CCEEEECcCHHHHHHHHHHHhC----CCCce----eEEEEeccchh----hhhHHhhcCCceeEEe--ccc-hhHHHHHH
Confidence 5999999999999999999763 44432 36788876411 111111 111221110 000 01112 34
Q ss_pred HHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCC
Q 011618 402 EVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (481)
Q Consensus 402 e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSN 445 (481)
.+|+. +|++|=+| +..++.+++++-.+ ..=-.+-++|
T Consensus 79 aLl~~--~DvVIN~s--~~~~~l~Im~acle---aGv~YlDTa~ 115 (480)
T 2ph5_A 79 STLEE--NDFLIDVS--IGISSLALIILCNQ---KGALYINAAT 115 (480)
T ss_dssp GGCCT--TCEEEECC--SSSCHHHHHHHHHH---HTCEEEESSC
T ss_pred HHhcC--CCEEEECC--ccccCHHHHHHHHH---cCCCEEECCC
Confidence 46665 59999655 56788888887754 3345666776
No 425
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=57.70 E-value=6.8 Score=40.28 Aligned_cols=31 Identities=32% Similarity=0.429 Sum_probs=25.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEe
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLD 365 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD 365 (481)
.+|+|+|||.||+..|..+.+. .| .++.++|
T Consensus 4 ~dvvVIGgG~aGl~aA~~la~~----~G-------~~V~liE 34 (490)
T 1fec_A 4 YDLVVIGAGSGGLEAGWNAASL----HK-------KRVAVID 34 (490)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH----HC-------CCEEEEE
T ss_pred ccEEEECCCHHHHHHHHHHHHH----cC-------CEEEEEe
Confidence 6899999999999999988751 25 3699999
No 426
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=57.33 E-value=4.9 Score=40.24 Aligned_cols=33 Identities=30% Similarity=0.496 Sum_probs=25.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|+|+|||.+|+..|..|.+ .|. ++.++++..
T Consensus 17 ~~v~iiG~G~~Gl~aa~~l~~-----~g~-------~v~v~E~~~ 49 (478)
T 2ivd_A 17 MNVAVVGGGISGLAVAHHLRS-----RGT-------DAVLLESSA 49 (478)
T ss_dssp CCEEEECCBHHHHHHHHHHHT-----TTC-------CEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEEcCC
Confidence 589999999999999988764 353 577777653
No 427
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=57.26 E-value=3.1 Score=42.02 Aligned_cols=33 Identities=24% Similarity=0.424 Sum_probs=25.5
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|+|+|||.||+..|..|.. .|+ ++.++|+.-
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~-----~G~-------~V~vlE~~~ 39 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSR-----RGL-------KILLVDSKP 39 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSS-----SSC-------CEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 579999999999999988754 454 477777653
No 428
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=57.14 E-value=16 Score=35.73 Aligned_cols=46 Identities=15% Similarity=0.286 Sum_probs=29.6
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 305 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
+..+.|++..+.+. . ++|+|+|||..|...+.+.... |. +++.+|+
T Consensus 166 ~ta~~~l~~~~~~~-g---~~VlV~GaG~vG~~~~qlak~~-----Ga-------~Vi~~~~ 211 (360)
T 1piw_A 166 LTVYSPLVRNGCGP-G---KKVGIVGLGGIGSMGTLISKAM-----GA-------ETYVISR 211 (360)
T ss_dssp HHHHHHHHHTTCST-T---CEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEEES
T ss_pred HHHHHHHHHcCCCC-C---CEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEcC
Confidence 33455665544332 3 6999999998888777665543 42 4777775
No 429
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=57.13 E-value=9.7 Score=37.59 Aligned_cols=67 Identities=22% Similarity=0.192 Sum_probs=45.2
Q ss_pred cCCccccCc---chhHHHHHHHHHHHHHHh---------CC---------CCCCCCCceEEEeCccHHHHHHHHHHHHHH
Q 011618 288 RFCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL---------SLTDFADQKIVVVGAGSAGLGVLKMAVQAA 346 (481)
Q Consensus 288 ~~~~FNDDi---QGTaaV~LAgll~Alr~~---------g~---------~l~dl~~~riv~~GAGsAg~GiA~ll~~~~ 346 (481)
.+.+.|--- +.+|=-+++.+++..|-. |. .-.+|.+.+|.|+|.|..|..+|+.+...
T Consensus 90 gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~- 168 (320)
T 1gdh_A 90 GIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGF- 168 (320)
T ss_dssp TCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHTT-
T ss_pred CcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHHC-
Confidence 366666432 334445788888877632 10 11356669999999999999999987643
Q ss_pred HHHcCCChhhhcCeEEEEec
Q 011618 347 ARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 347 ~~~~Gls~eeA~~~i~lvD~ 366 (481)
|+ +++.+|+
T Consensus 169 ----G~-------~V~~~d~ 177 (320)
T 1gdh_A 169 ----DM-------DIDYFDT 177 (320)
T ss_dssp ----TC-------EEEEECS
T ss_pred ----CC-------EEEEECC
Confidence 42 6888887
No 430
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=57.00 E-value=13 Score=36.15 Aligned_cols=33 Identities=24% Similarity=0.293 Sum_probs=22.2
Q ss_pred HHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHH
Q 011618 307 LLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAV 343 (481)
Q Consensus 307 ll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~ 343 (481)
.+.|++..+.+.. ++|+|+|||..|...+.+..
T Consensus 165 a~~~l~~~~~~~g----~~VlV~GaG~vG~~a~qla~ 197 (348)
T 3two_A 165 TYSPLKFSKVTKG----TKVGVAGFGGLGSMAVKYAV 197 (348)
T ss_dssp HHHHHHHTTCCTT----CEEEEESCSHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCC----CEEEEECCcHHHHHHHHHHH
Confidence 3556666544333 69999999987777665554
No 431
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=56.99 E-value=5.4 Score=39.89 Aligned_cols=34 Identities=26% Similarity=0.511 Sum_probs=26.7
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccce
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 369 (481)
-||||+|||.||+..|..|. ..| .+|.++|+..-
T Consensus 10 ~~~vIvGgG~AGl~aA~~L~-----~~~-------~~itlie~~~~ 43 (385)
T 3klj_A 10 TKILILGAGPAGFSAAKAAL-----GKC-------DDITMINSEKY 43 (385)
T ss_dssp CSEEEECCSHHHHHHHHHHT-----TTC-------SCEEEECSSSS
T ss_pred CCEEEEcCcHHHHHHHHHHh-----CCC-------CEEEEEECCCC
Confidence 69999999999999999981 223 36888887643
No 432
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=56.86 E-value=17 Score=35.64 Aligned_cols=35 Identities=20% Similarity=0.253 Sum_probs=23.7
Q ss_pred HHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHH
Q 011618 307 LLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQ 344 (481)
Q Consensus 307 ll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~ 344 (481)
.+.+++..+.+... ++|+|.|||..|...+++...
T Consensus 168 a~~~l~~~~~~~~g---~~VlV~GaG~vG~~a~qlak~ 202 (357)
T 2cf5_A 168 VYSPLSHFGLKQPG---LRGGILGLGGVGHMGVKIAKA 202 (357)
T ss_dssp HHHHHHHTSTTSTT---CEEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCC---CEEEEECCCHHHHHHHHHHHH
Confidence 34566655544234 799999999888877766543
No 433
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=56.69 E-value=5.1 Score=38.27 Aligned_cols=35 Identities=20% Similarity=0.311 Sum_probs=23.8
Q ss_pred CCCceEEEeCccH---HHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 321 FADQKIVVVGAGS---AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 321 l~~~riv~~GAGs---Ag~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
|++.++||.||++ .|.+||+.+.+ +|. +++++|++
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~-----~G~-------~V~~~~r~ 65 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCA-----QGA-------EVALTYLS 65 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 4459999999963 44446666554 453 68888875
No 434
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=56.65 E-value=5.9 Score=41.90 Aligned_cols=33 Identities=27% Similarity=0.464 Sum_probs=27.1
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
..|+|+|||.+|+++|..+.. .|+ ++.++|+..
T Consensus 33 ~DVvVIGgGi~G~~~A~~La~-----rG~-------~V~LlE~~~ 65 (571)
T 2rgh_A 33 LDLLIIGGGITGAGVAVQAAA-----SGI-------KTGLIEMQD 65 (571)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCC
Confidence 579999999999999988764 364 588999754
No 435
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=56.57 E-value=14 Score=35.75 Aligned_cols=20 Identities=15% Similarity=0.323 Sum_probs=15.8
Q ss_pred ceEEEeCccHHHHHHHHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAV 343 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~ 343 (481)
++|+|+|||..|...+++..
T Consensus 172 ~~VlV~GaG~vG~~aiqlak 191 (344)
T 2h6e_A 172 PVVIVNGIGGLAVYTIQILK 191 (344)
T ss_dssp CEEEEECCSHHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHH
Confidence 79999999877777666544
No 436
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=56.52 E-value=7.2 Score=36.58 Aligned_cols=36 Identities=22% Similarity=0.445 Sum_probs=24.6
Q ss_pred CCCCceEEEeCccH---HHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 320 DFADQKIVVVGAGS---AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 320 dl~~~riv~~GAGs---Ag~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
+|+++++||-||++ .|.+||+.+.+ +|. +++++|++
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~-----~Ga-------~Vvi~~r~ 41 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQ-----LGA-------KLVFTYRK 41 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHH-----CCC-------EEEEEECC
Confidence 35569999999853 45556666554 563 78888875
No 437
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=56.41 E-value=6.9 Score=40.38 Aligned_cols=31 Identities=35% Similarity=0.474 Sum_probs=25.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEe
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLD 365 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD 365 (481)
.+|+|+|||.||+..|..+.+. .| .++.++|
T Consensus 8 ~dvvVIGgG~aGl~aA~~la~~----~G-------~~V~liE 38 (495)
T 2wpf_A 8 FDLVVIGAGSGGLEAGWNAATL----YG-------KRVAVVD 38 (495)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH----HC-------CCEEEEE
T ss_pred cCEEEECCChhHHHHHHHHHHh----cC-------CeEEEEe
Confidence 6899999999999999988751 25 3699999
No 438
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=56.29 E-value=6.7 Score=38.72 Aligned_cols=33 Identities=30% Similarity=0.530 Sum_probs=26.7
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccce
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 369 (481)
.++||+|||.||+..|..+.+ .| ++.++|+.-.
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~-----~g--------~V~lie~~~~ 41 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQ-----TY--------EVTVIDKEPV 41 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-----TS--------EEEEECSSSS
T ss_pred CcEEEECCcHHHHHHHHHHhh-----cC--------CEEEEECCCC
Confidence 589999999999999988743 23 6889998654
No 439
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=56.27 E-value=15 Score=36.12 Aligned_cols=32 Identities=19% Similarity=0.340 Sum_probs=23.0
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
++|+|+|||+.|...+.+.... |. ++++.+|+
T Consensus 193 ~~VlV~GaG~vG~~aiqlak~~-----Ga------~~Vi~~~~ 224 (373)
T 1p0f_A 193 STCAVFGLGGVGFSAIVGCKAA-----GA------SRIIGVGT 224 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHc-----CC------CeEEEECC
Confidence 6999999998888777665433 42 36777764
No 440
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=56.19 E-value=15 Score=36.02 Aligned_cols=32 Identities=28% Similarity=0.392 Sum_probs=23.0
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
++|+|+|||+.|...+++.... |. ++++.+|+
T Consensus 192 ~~VlV~GaG~vG~~avqla~~~-----Ga------~~Vi~~~~ 223 (373)
T 2fzw_A 192 SVCAVFGLGGVGLAVIMGCKVA-----GA------SRIIGVDI 223 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHc-----CC------CeEEEEcC
Confidence 6999999998888777665433 42 36777764
No 441
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=56.11 E-value=46 Score=32.91 Aligned_cols=122 Identities=15% Similarity=0.142 Sum_probs=74.9
Q ss_pred HHHHhhcccceeeeeeeccCcccccccccchhhHHHHHHHhhcccCCCccccccCChhhHHHHHhcCCCCCeeEEEEecC
Q 011618 101 ILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDG 180 (481)
Q Consensus 101 ~L~~L~~rNe~LFy~ll~~~~~e~lpiiYTPtVg~ac~~~s~~~rrprGlyis~~d~g~i~~~l~nwp~~~v~viVVTDG 180 (481)
-|+.++.+++.+ .||=+|....+..+.+- ++++|.|.|+
T Consensus 20 ~lr~~~~~g~~i-----------~m~tayDa~sA~l~e~a------------------------------G~d~ilvGdS 58 (275)
T 3vav_A 20 KLQAMREAGEKI-----------AMLTCYDASFAALLDRA------------------------------NVDVQLIGDS 58 (275)
T ss_dssp HHHHHHHHTCCE-----------EEEECCSHHHHHHHHHT------------------------------TCSEEEECTT
T ss_pred HHHHHHHCCCcE-----------EEEeCcCHHHHHHHHHc------------------------------CCCEEEECcH
Confidence 355666666665 26888888888876655 4789999997
Q ss_pred ce--eeccCCCCCccccccchhhhhhhhhcCCCCCceecEEeeccCCccccccCcccccccccCCChhhhhHhHHHHHHH
Q 011618 181 SR--ILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEA 258 (481)
Q Consensus 181 ~r--ILGLGDlG~~Gm~I~iGKl~LY~a~gGI~P~~~LPV~LDvGTnN~~LL~Dp~YlG~r~~R~~g~~Y~~~vdefv~a 258 (481)
-. +||.-|.+.--|.-|+--+. ..+.|.+ ..||+.|.-+- -| .-.++.++.
T Consensus 59 l~~~~lG~~dt~~vtldem~~h~~--aV~r~~~---~~~vvaD~pfg--------sY--------------~s~~~a~~~ 111 (275)
T 3vav_A 59 LGNVLQGQTTTLPVTLDDIAYHTA--CVARAQP---RALIVADLPFG--------TY--------------GTPADAFAS 111 (275)
T ss_dssp HHHHTTCCSSSTTCCHHHHHHHHH--HHHHTCC---SSEEEEECCTT--------SC--------------SSHHHHHHH
T ss_pred HHHHHcCCCCCCccCHHHHHHHHH--HHHhcCC---CCCEEEecCCC--------CC--------------CCHHHHHHH
Confidence 64 56666665433333332111 2345666 68999998421 13 235666666
Q ss_pred HHHhC-Cce-EEEeecCCCchHHHHHHHHhhc-CCcc
Q 011618 259 VHARW-PKA-IVQFEDFQMKWAFETLERYRKR-FCMF 292 (481)
Q Consensus 259 v~~~~-P~~-~IqfEDf~~~naf~iL~ryr~~-~~~F 292 (481)
+.+.. -.+ .|++||=. .-.+..++..+. ||++
T Consensus 112 a~rl~kaGa~aVklEdg~--~~~~~i~~l~~~GIpv~ 146 (275)
T 3vav_A 112 AVKLMRAGAQMVKFEGGE--WLAETVRFLVERAVPVC 146 (275)
T ss_dssp HHHHHHTTCSEEEEECCG--GGHHHHHHHHHTTCCEE
T ss_pred HHHHHHcCCCEEEECCch--hHHHHHHHHHHCCCCEE
Confidence 55444 244 99999953 334566666665 6665
No 442
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=56.08 E-value=17 Score=35.69 Aligned_cols=100 Identities=13% Similarity=0.012 Sum_probs=58.5
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
.++.|+|+|..|-.+++.+... .+. ++++++|+. .++ .....+.|....-+ .. ..++.|+
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~----~~~--a~~la~~~~~~~~~---~~-~~~~~e~ 185 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRV----FDI------GEVKAYDVR----EKA--AKKFVSYCEDRGIS---AS-VQPAEEA 185 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECSS----HHH--HHHHHHHHHHTTCC---EE-ECCHHHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHh----CCc------cEEEEECCC----HHH--HHHHHHHHHhcCce---EE-ECCHHHH
Confidence 7999999999999888877653 232 578888873 111 11122222110000 12 4579999
Q ss_pred hcccCCcEEEeecCCC-CCCCHHHHHHhhhcCCCCCEEEecC--CCCCCCCCCCCH
Q 011618 404 VRKVKPHVLLGLSGVG-GVFNEEVLKAMRESDSVKPAIFAMS--NPTMNGLFSCCV 456 (481)
Q Consensus 404 V~~vkptvLIG~S~~~-g~Ft~evv~~Ma~~~~erPIIFaLS--NPt~~aE~~~t~ 456 (481)
+ . .|++|=++..+ -.++.+ + ..+.-.|+.++ +|. +.| +.+
T Consensus 186 v-~--aDvVi~aTp~~~pv~~~~----~---l~~G~~V~~ig~~~p~-~~e--l~~ 228 (322)
T 1omo_A 186 S-R--CDVLVTTTPSRKPVVKAE----W---VEEGTHINAIGADGPG-KQE--LDV 228 (322)
T ss_dssp T-S--SSEEEECCCCSSCCBCGG----G---CCTTCEEEECSCCSTT-CCC--BCH
T ss_pred h-C--CCEEEEeeCCCCceecHH----H---cCCCeEEEECCCCCCC-ccc--cCH
Confidence 9 5 89998766532 233332 2 23566888883 455 667 655
No 443
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=55.95 E-value=5.2 Score=42.24 Aligned_cols=32 Identities=25% Similarity=0.390 Sum_probs=26.5
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
--|||+|||.+|+++|..+.. .|+ ++.++++.
T Consensus 19 ~DVvVIGgGi~Gl~~A~~La~-----~G~-------~V~LlEk~ 50 (561)
T 3da1_A 19 LDLLVIGGGITGAGIALDAQV-----RGI-------QTGLVEMN 50 (561)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------cEEEEECC
Confidence 579999999999999987764 464 58889886
No 444
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=55.91 E-value=12 Score=33.24 Aligned_cols=95 Identities=18% Similarity=0.243 Sum_probs=55.0
Q ss_pred eEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCC-CCCHHH
Q 011618 325 KIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE-GASLLE 402 (481)
Q Consensus 325 riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~-~~~L~e 402 (481)
||+|.|| |-.|..+++.|.+ .| -+++.++++.- ....+ ....+.+- + ..+ ..++.+
T Consensus 2 ~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~~---~~~~~--~~~~~~~~--D---~~d~~~~~~~ 59 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLST-----TD-------YQIYAGARKVE---QVPQY--NNVKAVHF--D---VDWTPEEMAK 59 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTT-----SS-------CEEEEEESSGG---GSCCC--TTEEEEEC--C---TTSCHHHHHT
T ss_pred eEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCcc---chhhc--CCceEEEe--c---ccCCHHHHHH
Confidence 7999995 6677777666653 35 36888887531 11111 11111111 0 112 345778
Q ss_pred HhcccCCcEEEeecCCCCC--------CCHHHHHHhhhcCCCCCEEEecC
Q 011618 403 VVRKVKPHVLLGLSGVGGV--------FNEEVLKAMRESDSVKPAIFAMS 444 (481)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~--------Ft~evv~~Ma~~~~erPIIFaLS 444 (481)
++++ +|++|=+.+.... -+..++++|.+ ..-+.|||.=|
T Consensus 60 ~~~~--~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~-~~~~~iv~~SS 106 (219)
T 3dqp_A 60 QLHG--MDAIINVSGSGGKSLLKVDLYGAVKLMQAAEK-AEVKRFILLST 106 (219)
T ss_dssp TTTT--CSEEEECCCCTTSSCCCCCCHHHHHHHHHHHH-TTCCEEEEECC
T ss_pred HHcC--CCEEEECCcCCCCCcEeEeHHHHHHHHHHHHH-hCCCEEEEECc
Confidence 8876 8999977764321 15678888864 45567888443
No 445
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=55.85 E-value=6.7 Score=40.08 Aligned_cols=32 Identities=25% Similarity=0.480 Sum_probs=25.8
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 30 ~dv~IIGaG~aGl~aA~~l~~-----~g-------~~v~v~E~~ 61 (397)
T 3hdq_A 30 FDYLIVGAGFAGSVLAERLAS-----SG-------QRVLIVDRR 61 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSS
T ss_pred CCEEEECccHHHHHHHHHHHH-----CC-------CceEEEecc
Confidence 689999999999999988754 34 357788875
No 446
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=55.81 E-value=19 Score=32.96 Aligned_cols=91 Identities=21% Similarity=0.353 Sum_probs=52.4
Q ss_pred CCceEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCH
Q 011618 322 ADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (481)
Q Consensus 322 ~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L 400 (481)
+..+|+|.|| |-.|..+++.|.+ .|... ....- .+... . .+ ..+..++
T Consensus 5 ~~~~vlVtGatG~iG~~l~~~L~~-----~g~~~---~~~~~-------------~~~~~-----~--~D---~~d~~~~ 53 (319)
T 4b8w_A 5 QSMRILVTGGSGLVGKAIQKVVAD-----GAGLP---GEDWV-------------FVSSK-----D--AD---LTDTAQT 53 (319)
T ss_dssp CCCEEEEETCSSHHHHHHHHHHHT-----TTCCT---TCEEE-------------ECCTT-----T--CC---TTSHHHH
T ss_pred cCCeEEEECCCcHHHHHHHHHHHh-----cCCcc---ccccc-------------ccCce-----e--cc---cCCHHHH
Confidence 3489999997 8888888887764 34300 00000 01000 0 00 0123458
Q ss_pred HHHhcccCCcEEEeecCCCCC-----------------CCHHHHHHhhhcCCCCCEEEecC
Q 011618 401 LEVVRKVKPHVLLGLSGVGGV-----------------FNEEVLKAMRESDSVKPAIFAMS 444 (481)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~g~-----------------Ft~evv~~Ma~~~~erPIIFaLS 444 (481)
.++++..++|++|=+.+..+. -|..+++++.+ ..-+.+||.=|
T Consensus 54 ~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~-~~~~~~v~~SS 113 (319)
T 4b8w_A 54 RALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFE-VGARKVVSCLS 113 (319)
T ss_dssp HHHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHH-TTCSEEEEECC
T ss_pred HHHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEEcc
Confidence 889998899999988775431 12346777754 44456888433
No 447
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=55.80 E-value=6.5 Score=41.35 Aligned_cols=32 Identities=22% Similarity=0.417 Sum_probs=26.2
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.||.|+|+|..|.+||..+..+ |. +++++|.+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~a-----G~-------~V~l~D~~ 86 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLA-----GI-------ETFLVVRN 86 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECc
Confidence 5899999999999999988754 53 57777763
No 448
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=55.67 E-value=5.9 Score=45.10 Aligned_cols=33 Identities=24% Similarity=0.500 Sum_probs=27.4
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||.||+..|..|.. .|. +++.++|++
T Consensus 188 ~~VvVIGgGpAGl~aA~~L~~-----~G~------~~Vtv~E~~ 220 (1025)
T 1gte_A 188 AKIALLGAGPASISCASFLAR-----LGY------SDITIFEKQ 220 (1025)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESS
T ss_pred CEEEEECccHHHHHHHHHHHh-----cCC------CcEEEEeCC
Confidence 689999999999999998765 353 258999986
No 449
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=55.65 E-value=8.2 Score=34.83 Aligned_cols=99 Identities=14% Similarity=0.159 Sum_probs=56.0
Q ss_pred CCCCCCceEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhh----ccccccCCcC
Q 011618 318 LTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAA----PFAKDPGDFM 392 (481)
Q Consensus 318 l~dl~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~----~fA~~~~~~~ 392 (481)
..+|++.+|+|.|| |-.|..+++.|++ .| -++++++++. +.+...+. .+..- ++
T Consensus 16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~R~~------~~~~~~~~~~~~~~~~~--Dl- 74 (236)
T 3e8x_A 16 NLYFQGMRVLVVGANGKVARYLLSELKN-----KG-------HEPVAMVRNE------EQGPELRERGASDIVVA--NL- 74 (236)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSG------GGHHHHHHTTCSEEEEC--CT-
T ss_pred ccCcCCCeEEEECCCChHHHHHHHHHHh-----CC-------CeEEEEECCh------HHHHHHHhCCCceEEEc--cc-
Confidence 34456699999998 8888888888765 35 2688888742 11111111 11110 00
Q ss_pred CcCCCCCHHHHhcccCCcEEEeecCCCCC------------CCHHHHHHhhhcCCCCCEEEecC
Q 011618 393 GLREGASLLEVVRKVKPHVLLGLSGVGGV------------FNEEVLKAMRESDSVKPAIFAMS 444 (481)
Q Consensus 393 ~~~~~~~L~e~V~~vkptvLIG~S~~~g~------------Ft~evv~~Ma~~~~erPIIFaLS 444 (481)
. .++.+++++ +|++|=+.+.... -+..+++++.+ ...+-|||.=|
T Consensus 75 ---~-~~~~~~~~~--~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~iv~~SS 131 (236)
T 3e8x_A 75 ---E-EDFSHAFAS--IDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEK-RGIKRFIMVSS 131 (236)
T ss_dssp ---T-SCCGGGGTT--CSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHH-HTCCEEEEECC
T ss_pred ---H-HHHHHHHcC--CCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHH-cCCCEEEEEec
Confidence 1 457777775 8999977664321 14567778754 44456888544
No 450
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=55.50 E-value=9.6 Score=35.34 Aligned_cols=86 Identities=22% Similarity=0.320 Sum_probs=54.3
Q ss_pred eEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 325 KIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 325 riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
||+|.|| |-.|..+++.|. . | -+++.+|++.- .+.-+- .+..++.++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-----g-------~~V~~~~r~~~-------------~~~~D~------~d~~~~~~~ 49 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-----V-------GNLIALDVHSK-------------EFCGDF------SNPKGVAET 49 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-----T-------SEEEEECTTCS-------------SSCCCT------TCHHHHHHH
T ss_pred eEEEECCCCHHHHHHHHHhh-c-----C-------CeEEEeccccc-------------cccccC------CCHHHHHHH
Confidence 7999998 888888888776 3 3 36888877530 010010 122458888
Q ss_pred hcccCCcEEEeecCCCCC----------------CCHHHHHHhhhcCCCCCEEEecC
Q 011618 404 VRKVKPHVLLGLSGVGGV----------------FNEEVLKAMRESDSVKPAIFAMS 444 (481)
Q Consensus 404 V~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~~erPIIFaLS 444 (481)
++..++|++|=+.+.... -+..+++++.+ ..- .+||.=|
T Consensus 50 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~-~~v~~SS 104 (299)
T 1n2s_A 50 VRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANE-TGA-WVVHYST 104 (299)
T ss_dssp HHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTT-TTC-EEEEEEE
T ss_pred HHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHH-cCC-cEEEEec
Confidence 888889999988765331 14567777743 333 5888544
No 451
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=55.42 E-value=7.1 Score=36.11 Aligned_cols=36 Identities=19% Similarity=0.302 Sum_probs=26.1
Q ss_pred CCCCceEEEeCc-cH-HHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 320 DFADQKIVVVGA-GS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 320 dl~~~riv~~GA-Gs-Ag~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
+|++++++|.|| |+ .|..+|+.+++ .|. +++++|++
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~-----~G~-------~V~~~~r~ 56 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALL-----EGA-------DVVISDYH 56 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHH-----TTC-------EEEEEESC
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHH-----CCC-------EEEEecCC
Confidence 455699999999 64 77777777664 352 68888874
No 452
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=55.38 E-value=9 Score=37.51 Aligned_cols=33 Identities=27% Similarity=0.482 Sum_probs=22.9
Q ss_pred ceEEEeCccHHHHHH-HHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 324 QKIVVVGAGSAGLGV-LKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 324 ~riv~~GAGsAg~Gi-A~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
++|+|+|||+.|... +.+...+ .|. ++++.+|+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~----~Ga------~~Vi~~~~ 207 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDD----KGY------ENLYCLGR 207 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCT----TCC------CEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHHH----cCC------cEEEEEeC
Confidence 699999998888777 5544122 353 45888886
No 453
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=55.26 E-value=52 Score=28.65 Aligned_cols=92 Identities=14% Similarity=0.223 Sum_probs=52.1
Q ss_pred eEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChh--hhccccccCCcCCcCCCCCHH
Q 011618 325 KIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPA--AAPFAKDPGDFMGLREGASLL 401 (481)
Q Consensus 325 riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~--k~~fA~~~~~~~~~~~~~~L~ 401 (481)
||+|.|| |-.|..+++.|++ .| .+++.++++. +.+... ...+..- +. .+..+
T Consensus 2 kvlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~------~~~~~~~~~~~~~~~--D~---~d~~~-- 56 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKN-----RG-------HEVTAIVRNA------GKITQTHKDINILQK--DI---FDLTL-- 56 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESCS------HHHHHHCSSSEEEEC--CG---GGCCH--
T ss_pred eEEEEcCCchhHHHHHHHHHh-----CC-------CEEEEEEcCc------hhhhhccCCCeEEec--cc---cChhh--
Confidence 7999996 8888888887764 34 3688887741 111100 0011110 00 11112
Q ss_pred HHhcccCCcEEEeecCCCCC-------CCHHHHHHhhhcCCCCCEEEecC
Q 011618 402 EVVRKVKPHVLLGLSGVGGV-------FNEEVLKAMRESDSVKPAIFAMS 444 (481)
Q Consensus 402 e~V~~vkptvLIG~S~~~g~-------Ft~evv~~Ma~~~~erPIIFaLS 444 (481)
++++. +|++|=+.+.+.. .++.++++|.+ .....+||.-|
T Consensus 57 ~~~~~--~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~-~~~~~~v~~SS 103 (221)
T 3ew7_A 57 SDLSD--QNVVVDAYGISPDEAEKHVTSLDHLISVLNG-TVSPRLLVVGG 103 (221)
T ss_dssp HHHTT--CSEEEECCCSSTTTTTSHHHHHHHHHHHHCS-CCSSEEEEECC
T ss_pred hhhcC--CCEEEECCcCCccccchHHHHHHHHHHHHHh-cCCceEEEEec
Confidence 67776 8999977765322 23678888854 43456777544
No 454
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=55.13 E-value=7.3 Score=35.72 Aligned_cols=32 Identities=19% Similarity=0.313 Sum_probs=25.6
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.||.|+|+|..|..+|..+.. .|. +++++|++
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~-----~g~-------~V~~~~r~ 60 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVG-----SGF-------KVVVGSRN 60 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 689999999999999988764 342 57778764
No 455
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=54.85 E-value=12 Score=37.37 Aligned_cols=35 Identities=26% Similarity=0.384 Sum_probs=27.2
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|+|+|||.||+..|..|.+ .|.+ .+|.++++..
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~-----~G~~-----~~V~vlEa~~ 37 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSR-----APCP-----PKVVLVESSE 37 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHT-----SSSC-----CEEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHh-----CCCC-----CcEEEEeCCC
Confidence 589999999999999998865 3531 1688888753
No 456
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=54.82 E-value=13 Score=35.86 Aligned_cols=40 Identities=15% Similarity=0.047 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCceEEEeCc-cHHHHHHHHHHHH
Q 011618 302 VALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQ 344 (481)
Q Consensus 302 V~LAgll~Alr~~g~~l~dl~~~riv~~GA-GsAg~GiA~ll~~ 344 (481)
+.++..+.|+......-.. ++++|.|| |..|..+++++..
T Consensus 138 ~~~~ta~~al~~~~~~~~g---~~vlI~Ga~g~iG~~~~~~a~~ 178 (345)
T 2j3h_A 138 MPGMTAYAGFYEVCSPKEG---ETVYVSAASGAVGQLVGQLAKM 178 (345)
T ss_dssp HHHHHHHHHHHTTSCCCTT---CEEEESSTTSHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHhCCCCC---CEEEEECCCcHHHHHHHHHHHH
Confidence 3444455555322222233 79999997 8888888776654
No 457
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=54.73 E-value=16 Score=35.78 Aligned_cols=33 Identities=18% Similarity=0.282 Sum_probs=21.3
Q ss_pred HHHHHHH--hCCCCCCCCCceEEEeCccHHHHHHHHHHH
Q 011618 307 LLGTVRA--QGLSLTDFADQKIVVVGAGSAGLGVLKMAV 343 (481)
Q Consensus 307 ll~Alr~--~g~~l~dl~~~riv~~GAGsAg~GiA~ll~ 343 (481)
.+.|++. .+.+. . ++|+|+|||..|...+.+..
T Consensus 173 a~~al~~~~~~~~~-g---~~VlV~GaG~vG~~avqlak 207 (359)
T 1h2b_A 173 AYRAVKKAARTLYP-G---AYVAIVGVGGLGHIAVQLLK 207 (359)
T ss_dssp HHHHHHHHHTTCCT-T---CEEEEECCSHHHHHHHHHHH
T ss_pred HHHHHHhhccCCCC-C---CEEEEECCCHHHHHHHHHHH
Confidence 4556665 44333 3 69999999977776665543
No 458
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=54.59 E-value=6.6 Score=37.61 Aligned_cols=98 Identities=11% Similarity=0.018 Sum_probs=56.2
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc--ceeecCCCCCChhhhccccccCCcCCcCCCCCHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD--GLITKERKNLDPAAAPFAKDPGDFMGLREGASLL 401 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~--GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~ 401 (481)
.||.|+|||+-|..+|..|..+ | .+++++|+. ++-...... .+ +. .-..+..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~-----g-------~~V~~~~r~~~~~~~~~~~g------~~--~~------~~~~~~~ 56 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQS-----L-------PHTTLIGRHAKTITYYTVPH------AP--AQ------DIVVKGY 56 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-----C-------TTCEEEESSCEEEEEESSTT------SC--CE------EEEEEEG
T ss_pred cEEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEEeccCcEEEEecCC------ee--cc------ceecCch
Confidence 5899999999999999988754 4 256777764 221110000 00 00 0001223
Q ss_pred HHh-cccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEEecCCCCCCCC
Q 011618 402 EVV-RKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNGL 451 (481)
Q Consensus 402 e~V-~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE 451 (481)
+++ +. +|++| ++. +-..++++++.++....+..+|..+.|-....|
T Consensus 57 ~~~~~~--~D~vi-lav-k~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~ 103 (294)
T 3g17_A 57 EDVTNT--FDVII-IAV-KTHQLDAVIPHLTYLAHEDTLIILAQNGYGQLE 103 (294)
T ss_dssp GGCCSC--EEEEE-ECS-CGGGHHHHGGGHHHHEEEEEEEEECCSSCCCGG
T ss_pred HhcCCC--CCEEE-EeC-CccCHHHHHHHHHHhhCCCCEEEEeccCcccHh
Confidence 333 33 67766 443 334567788777543345567778999877555
No 459
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=54.55 E-value=6.9 Score=41.08 Aligned_cols=31 Identities=39% Similarity=0.547 Sum_probs=25.8
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
.+|+|+|||.||+..|..+.+. |+ ++.++|+
T Consensus 108 ~dvvVIG~GpAGl~aA~~l~~~-----g~-------~v~liE~ 138 (598)
T 2x8g_A 108 YDLIVIGGGSGGLAAGKEAAKY-----GA-------KTAVLDY 138 (598)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECC
T ss_pred ccEEEECCCccHHHHHHHHHhC-----CC-------eEEEEec
Confidence 6899999999999999887653 53 6888985
No 460
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=54.51 E-value=18 Score=34.64 Aligned_cols=49 Identities=18% Similarity=0.077 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeC-ccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 303 ALAGLLGTVRAQGLSLTDFADQKIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 303 ~LAgll~Alr~~g~~l~dl~~~riv~~G-AGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
.++..+.|++....--.. ++++|.| +|..|..+++++... | -+++.+|+
T Consensus 124 ~~~ta~~al~~~~~~~~g---~~vlV~Ga~ggiG~~~~~~a~~~-----G-------~~V~~~~~ 173 (327)
T 1qor_A 124 KGLTVYYLLRKTYEIKPD---EQFLFHAAAGGVGLIACQWAKAL-----G-------AKLIGTVG 173 (327)
T ss_dssp HHHHHHHHHHTTSCCCTT---CEEEESSTTBHHHHHHHHHHHHH-----T-------CEEEEEES
T ss_pred HHHHHHHHHHHhhCCCCC---CEEEEECCCCHHHHHHHHHHHHc-----C-------CEEEEEeC
Confidence 344445555422222233 7999999 588888888776543 4 25777776
No 461
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=54.41 E-value=35 Score=33.20 Aligned_cols=94 Identities=16% Similarity=0.157 Sum_probs=49.4
Q ss_pred ceEEEeC-ccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHH
Q 011618 324 QKIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~G-AGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (481)
.||+++| .|-.|-.+++++.+. .++ +=+..+|+++--..++ ++. .++.-.. +.+...++.+
T Consensus 8 ikV~V~Ga~G~MG~~i~~~l~~~----~~~------eLv~~~d~~~~~~~G~-d~g----el~g~~~---gv~v~~dl~~ 69 (272)
T 4f3y_A 8 MKIAIAGASGRMGRMLIEAVLAA----PDA------TLVGALDRTGSPQLGQ-DAG----AFLGKQT---GVALTDDIER 69 (272)
T ss_dssp EEEEESSTTSHHHHHHHHHHHHC----TTE------EEEEEBCCTTCTTTTS-BTT----TTTTCCC---SCBCBCCHHH
T ss_pred cEEEEECCCCHHHHHHHHHHHhC----CCC------EEEEEEEecCcccccc-cHH----HHhCCCC---CceecCCHHH
Confidence 7999999 799999998887652 332 2244567653100011 111 1111000 1123457888
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEE
Q 011618 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIF 441 (481)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIF 441 (481)
+++. |||+|=+|. |.+. .+.++...+ +..|+|.
T Consensus 70 ll~~--~DVVIDfT~-p~a~-~~~~~~al~--~G~~vVi 102 (272)
T 4f3y_A 70 VCAE--ADYLIDFTL-PEGT-LVHLDAALR--HDVKLVI 102 (272)
T ss_dssp HHHH--CSEEEECSC-HHHH-HHHHHHHHH--HTCEEEE
T ss_pred HhcC--CCEEEEcCC-HHHH-HHHHHHHHH--cCCCEEE
Confidence 8874 888887764 3332 334444432 3455554
No 462
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=54.21 E-value=19 Score=33.91 Aligned_cols=102 Identities=21% Similarity=0.250 Sum_probs=57.4
Q ss_pred ceEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhcccc---ccCCc-C-CcCCC
Q 011618 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAK---DPGDF-M-GLREG 397 (481)
Q Consensus 324 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~---~~~~~-~-~~~~~ 397 (481)
.+|+|.|| |-.|..+++.|.+ .| -+++++|+.. .........+.. ..-.+ . ...+.
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 67 (341)
T 3enk_A 6 GTILVTGGAGYIGSHTAVELLA-----HG-------YDVVIADNLV------NSKREAIARIEKITGKTPAFHETDVSDE 67 (341)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECCCS------SSCTHHHHHHHHHHSCCCEEECCCTTCH
T ss_pred cEEEEecCCcHHHHHHHHHHHH-----CC-------CcEEEEecCC------cchHHHHHHHHhhcCCCceEEEeecCCH
Confidence 68999996 7777777776654 35 3688777631 122222111110 00000 0 01123
Q ss_pred CCHHHHhcccCCcEEEeecCCCCC----------------CCHHHHHHhhhcCCCCCEEEecC
Q 011618 398 ASLLEVVRKVKPHVLLGLSGVGGV----------------FNEEVLKAMRESDSVKPAIFAMS 444 (481)
Q Consensus 398 ~~L~e~V~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~~erPIIFaLS 444 (481)
.++.++++..++|++|=+.+.... -|..+++.|.+ ..-+.|||.=|
T Consensus 68 ~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~iv~~SS 129 (341)
T 3enk_A 68 RALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRE-RAVKRIVFSSS 129 (341)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH-TTCCEEEEEEE
T ss_pred HHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHh-CCCCEEEEEec
Confidence 458888886679999977764321 13467788854 45567888544
No 463
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=54.10 E-value=8.2 Score=39.99 Aligned_cols=34 Identities=18% Similarity=0.382 Sum_probs=27.7
Q ss_pred CCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
|++++|||+|+|..|..-+++|.++ | .++.++|.
T Consensus 10 l~~~~vlVvGgG~va~~k~~~L~~~-----g-------a~V~vi~~ 43 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKARLLLEA-----G-------ARLTVNAL 43 (457)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHT-----T-------BEEEEEES
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-----c-------CEEEEEcC
Confidence 4559999999999999999999875 3 26777776
No 464
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=54.07 E-value=7.8 Score=44.67 Aligned_cols=41 Identities=27% Similarity=0.416 Sum_probs=32.3
Q ss_pred CCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
|++.||+++|||.-|.-+++.|+.+++ ..| -..+|.++|.+
T Consensus 423 L~~~~VlvVGaGGlGsevlk~La~~Gv-~~g-----~~G~i~lvD~D 463 (1015)
T 3cmm_A 423 IANSKVFLVGSGAIGCEMLKNWALLGL-GSG-----SDGYIVVTDND 463 (1015)
T ss_dssp HHTCEEEEECCSHHHHHHHHHHHHHTT-TCS-----TTCEEEEECCC
T ss_pred HhcCeEEEEecCHHHHHHHHHHHHcCc-CcC-----CCCeEEEEeCC
Confidence 344899999999999999999998765 122 12589999986
No 465
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=54.07 E-value=14 Score=35.95 Aligned_cols=103 Identities=18% Similarity=0.317 Sum_probs=55.9
Q ss_pred CCCceEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCC-hhhhccccccCCcCCcCCCC
Q 011618 321 FADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLD-PAAAPFAKDPGDFMGLREGA 398 (481)
Q Consensus 321 l~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~-~~k~~fA~~~~~~~~~~~~~ 398 (481)
++..+|+|.|| |-.|..+++.|++ .|. .+++.+|+..- .....+. .....+..- + ..+..
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~-----~g~------~~V~~~~r~~~--~~~~~l~~~~~v~~~~~--D---l~d~~ 91 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLE-----LGV------NQVHVVDNLLS--AEKINVPDHPAVRFSET--S---ITDDA 91 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHH-----TTC------SEEEEECCCTT--CCGGGSCCCTTEEEECS--C---TTCHH
T ss_pred hCCCEEEEECCccHHHHHHHHHHHH-----cCC------ceEEEEECCCC--CchhhccCCCceEEEEC--C---CCCHH
Confidence 34489999997 8888888877765 341 36888876410 0001111 001111110 0 01223
Q ss_pred CHHHHhcccCCcEEEeecCCCCC----------------CCHHHHHHhhhcC-CCCCEEEecC
Q 011618 399 SLLEVVRKVKPHVLLGLSGVGGV----------------FNEEVLKAMRESD-SVKPAIFAMS 444 (481)
Q Consensus 399 ~L~e~V~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~-~erPIIFaLS 444 (481)
++.++++ ++|++|=+.+.... -|..+++++.+ . .-+.+||.=|
T Consensus 92 ~l~~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~-~~~~~~~V~~SS 151 (377)
T 2q1s_A 92 LLASLQD--EYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKH-FKRLKKVVYSAA 151 (377)
T ss_dssp HHHHCCS--CCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTT-CSSCCEEEEEEE
T ss_pred HHHHHhh--CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHH-hCCCCeEEEeCC
Confidence 4777777 49999988764321 14556777743 3 3456887443
No 466
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=54.04 E-value=6.6 Score=39.79 Aligned_cols=32 Identities=25% Similarity=0.445 Sum_probs=26.3
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
..|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 6 ~DVvVIGaG~aGl~aA~~la~-----~G~-------~V~liEk~ 37 (463)
T 4dna_A 6 YDLFVIGGGSGGVRSGRLAAA-----LGK-------KVAIAEEF 37 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESS
T ss_pred CcEEEECcCHHHHHHHHHHHh-----CCC-------EEEEEeCC
Confidence 579999999999999988754 353 68899984
No 467
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=53.56 E-value=66 Score=30.95 Aligned_cols=91 Identities=11% Similarity=0.019 Sum_probs=49.6
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
.||.|+|+|..|-..++.+.. ..+. +-+.++|++ .+... .+|+...- .....++.|+
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~----~~~~------~~~av~d~~------~~~~~----~~a~~~~~---~~~~~~~~~l 62 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRL----AGNG------EVVAVSSRT------LESAQ----AFANKYHL---PKAYDKLEDM 62 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHH----HCSE------EEEEEECSC------SSTTC----C---CCCC---SCEESCHHHH
T ss_pred eEEEEEechHHHHHHHHHHHh----CCCc------EEEEEEcCC------HHHHH----HHHHHcCC---CcccCCHHHH
Confidence 799999999887766554432 1221 123355552 11122 23332110 0125689999
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEE
Q 011618 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIF 441 (481)
Q Consensus 404 V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIF 441 (481)
++.-++|+++ +++ |.....++++...+ ..++|+.
T Consensus 63 l~~~~~D~V~-i~t-p~~~h~~~~~~al~--aGk~Vl~ 96 (329)
T 3evn_A 63 LADESIDVIY-VAT-INQDHYKVAKAALL--AGKHVLV 96 (329)
T ss_dssp HTCTTCCEEE-ECS-CGGGHHHHHHHHHH--TTCEEEE
T ss_pred hcCCCCCEEE-ECC-CcHHHHHHHHHHHH--CCCeEEE
Confidence 9977789888 554 55566666555433 3456654
No 468
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=53.24 E-value=17 Score=35.90 Aligned_cols=35 Identities=26% Similarity=0.252 Sum_probs=22.5
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHH
Q 011618 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAV 343 (481)
Q Consensus 305 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~ 343 (481)
...+.|++..+.+. . ++|+|+|||+.|...+++..
T Consensus 181 ~tA~~al~~~~~~~-g---~~VlV~GaG~vG~~aiqlak 215 (369)
T 1uuf_A 181 ITTYSPLRHWQAGP-G---KKVGVVGIGGLGHMGIKLAH 215 (369)
T ss_dssp HHHHHHHHHTTCCT-T---CEEEEECCSHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCC-C---CEEEEECCCHHHHHHHHHHH
Confidence 33456666554433 3 69999999987776665543
No 469
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=53.14 E-value=39 Score=30.14 Aligned_cols=97 Identities=16% Similarity=0.167 Sum_probs=54.3
Q ss_pred ceEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChh---hhccccccCCcCCcCCCCC
Q 011618 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPA---AAPFAKDPGDFMGLREGAS 399 (481)
Q Consensus 324 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~---k~~fA~~~~~~~~~~~~~~ 399 (481)
.+|+|.|| |-.|..+++.|++. |. ..+++++|++. +.+... ...+.. .++ .+..+
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~-----G~-----~~~V~~~~r~~------~~~~~~~~~~~~~~~--~D~---~d~~~ 77 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQ-----GL-----FSKVTLIGRRK------LTFDEEAYKNVNQEV--VDF---EKLDD 77 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHH-----TC-----CSEEEEEESSC------CCCCSGGGGGCEEEE--CCG---GGGGG
T ss_pred CeEEEECCCcHHHHHHHHHHHcC-----CC-----CCEEEEEEcCC------CCccccccCCceEEe--cCc---CCHHH
Confidence 78999996 77777777777653 42 12688888742 112211 111111 011 12345
Q ss_pred HHHHhcccCCcEEEeecCCCCC-------------CCHHHHHHhhhcCCCCCEEEecC
Q 011618 400 LLEVVRKVKPHVLLGLSGVGGV-------------FNEEVLKAMRESDSVKPAIFAMS 444 (481)
Q Consensus 400 L~e~V~~vkptvLIG~S~~~g~-------------Ft~evv~~Ma~~~~erPIIFaLS 444 (481)
+.++++. +|++|=+.+.... -+..+++.|.+ ...+.|||.=|
T Consensus 78 ~~~~~~~--~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~~~iv~~SS 132 (242)
T 2bka_A 78 YASAFQG--HDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKA-GGCKHFNLLSS 132 (242)
T ss_dssp GGGGGSS--CSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHH-TTCCEEEEECC
T ss_pred HHHHhcC--CCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHH-CCCCEEEEEcc
Confidence 7777775 8999987764210 13567777754 44456777433
No 470
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=53.09 E-value=6.6 Score=40.71 Aligned_cols=32 Identities=22% Similarity=0.409 Sum_probs=25.8
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.||.|+|+|..|.+||..+..+ |. +++++|++
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~-----G~-------~V~l~D~~ 69 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARV-----GI-------SVVAVESD 69 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 5799999999999999987653 53 57888863
No 471
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=53.09 E-value=13 Score=35.97 Aligned_cols=45 Identities=18% Similarity=0.217 Sum_probs=28.4
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 306 gll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
..+.+++..+.+.. ++|+|.|||..|...+++... .|. +++.+|+
T Consensus 154 ta~~~l~~~~~~~g----~~VlV~GaG~vG~~a~qla~~-----~Ga-------~Vi~~~~ 198 (340)
T 3s2e_A 154 TVYKGLKVTDTRPG----QWVVISGIGGLGHVAVQYARA-----MGL-------RVAAVDI 198 (340)
T ss_dssp HHHHHHHTTTCCTT----SEEEEECCSTTHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHHHHHHHcCCCCC----CEEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeC
Confidence 34556655544333 599999999877776655443 352 5777765
No 472
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=53.07 E-value=9.1 Score=35.39 Aligned_cols=32 Identities=16% Similarity=0.423 Sum_probs=25.4
Q ss_pred eEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 325 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
||.|+|+|..|..+|..+... |. .+++++|++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~r~ 33 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQ-----GG------YRIYIANRG 33 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----CS------CEEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHC-----CC------CeEEEECCC
Confidence 799999999999999988654 42 367788764
No 473
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=52.88 E-value=29 Score=33.80 Aligned_cols=98 Identities=23% Similarity=0.247 Sum_probs=55.0
Q ss_pred ceEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHH
Q 011618 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (481)
.+|+|.|| |-.|..+++.|++ .| -+++.+|++. .....+......+..- + ..+..++.+
T Consensus 30 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~~v~~~~~--D---l~d~~~~~~ 89 (379)
T 2c5a_A 30 LKISITGAGGFIASHIARRLKH-----EG-------HYVIASDWKK---NEHMTEDMFCDEFHLV--D---LRVMENCLK 89 (379)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSC---CSSSCGGGTCSEEEEC--C---TTSHHHHHH
T ss_pred CeEEEECCccHHHHHHHHHHHH-----CC-------CeEEEEECCC---ccchhhccCCceEEEC--C---CCCHHHHHH
Confidence 68999998 8888888877764 34 3688888742 1101110001111110 1 112345788
Q ss_pred HhcccCCcEEEeecCCCCC--C---------------CHHHHHHhhhcCCCCCEEEecC
Q 011618 403 VVRKVKPHVLLGLSGVGGV--F---------------NEEVLKAMRESDSVKPAIFAMS 444 (481)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~--F---------------t~evv~~Ma~~~~erPIIFaLS 444 (481)
+++. +|++|=+.+.... + |..+++++.+ ..-+.|||.=|
T Consensus 90 ~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~-~~~~~~V~~SS 145 (379)
T 2c5a_A 90 VTEG--VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARI-NGIKRFFYASS 145 (379)
T ss_dssp HHTT--CSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHH-TTCSEEEEEEE
T ss_pred HhCC--CCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHH-cCCCEEEEEee
Confidence 8875 9999988764332 1 2356666643 44457888533
No 474
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=52.82 E-value=5.9 Score=40.43 Aligned_cols=36 Identities=19% Similarity=0.438 Sum_probs=27.1
Q ss_pred CCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
++++||+|+|.|-+|++.|+.+.+ .|. ++...|++-
T Consensus 3 ~~~~~v~viG~G~~G~~~a~~l~~-----~G~-------~v~~~D~~~ 38 (439)
T 2x5o_A 3 YQGKNVVIIGLGLTGLSCVDFFLA-----RGV-------TPRVMDTRM 38 (439)
T ss_dssp CTTCCEEEECCHHHHHHHHHHHHT-----TTC-------CCEEEESSS
T ss_pred CCCCEEEEEeecHHHHHHHHHHHh-----CCC-------EEEEEECCC
Confidence 445899999999999999866643 453 577788753
No 475
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=52.81 E-value=3.8 Score=42.24 Aligned_cols=32 Identities=25% Similarity=0.474 Sum_probs=26.3
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 368 (481)
.+|||+|||.||+..|..+.+. .++.++|+..
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-------------~~V~vie~~~ 140 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-------------LTVALIEERG 140 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-------------CCEEEECTTS
T ss_pred CCEEEECccHHHHHHHHHHHhc-------------CCEEEEeCCC
Confidence 5899999999999999877542 3789999864
No 476
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=52.74 E-value=15 Score=36.05 Aligned_cols=32 Identities=25% Similarity=0.404 Sum_probs=22.7
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 228 (376)
T 1e3i_A 197 STCAVFGLGCVGLSAIIGCKI-----AGA------SRIIAIDI 228 (376)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 699999999888777665543 343 36777764
No 477
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=52.60 E-value=7.6 Score=40.67 Aligned_cols=35 Identities=37% Similarity=0.652 Sum_probs=27.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccee
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 370 (481)
..|||+|||.||+..|-.+.+ .|. ++.++++...+
T Consensus 127 ~DVvVVGaG~aGl~aA~~la~-----~G~-------~V~vlEk~~~~ 161 (571)
T 1y0p_A 127 VDVVVVGSGGAGFSAAISATD-----SGA-------KVILIEKEPVI 161 (571)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------cEEEEeCCCCC
Confidence 789999999999999987654 453 58889887544
No 478
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=52.59 E-value=6.4 Score=40.48 Aligned_cols=32 Identities=25% Similarity=0.611 Sum_probs=26.0
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
..|+|+|||.||+..|..+.+ .| .++.++|++
T Consensus 9 ~DvvVIGgG~aGl~aA~~la~-----~G-------~~V~liE~~ 40 (492)
T 3ic9_A 9 VDVAIIGTGTAGMGAYRAAKK-----HT-------DKVVLIEGG 40 (492)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TC-------SCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CcEEEEeCC
Confidence 579999999999999887754 35 368899975
No 479
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=52.51 E-value=14 Score=39.25 Aligned_cols=36 Identities=36% Similarity=0.483 Sum_probs=27.0
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHc--CCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMA--GNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~--Gls~eeA~~~i~lvD~~ 367 (481)
-.|||+|||.||+..|-.|.+... .. |+ ++.++++.
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~-~~~~G~-------~V~vlEk~ 73 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAA-QHEKDL-------RVCLVEKA 73 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHH-HTTCCC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHhccc-ccCCCC-------cEEEEeCC
Confidence 469999999999999998877533 22 53 46777764
No 480
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=52.49 E-value=12 Score=36.52 Aligned_cols=48 Identities=19% Similarity=0.313 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 304 LAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 304 LAgll~Alr~~g~~l~dl~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
++..+.|+.....--.. ++|+|.|| |..|..+++++.. .|. +++.+|+
T Consensus 144 ~~ta~~~l~~~~~~~~g---~~VlV~Gasg~iG~~~~~~a~~-----~Ga-------~Vi~~~~ 192 (342)
T 4eye_A 144 YHTMYFAYARRGQLRAG---ETVLVLGAAGGIGTAAIQIAKG-----MGA-------KVIAVVN 192 (342)
T ss_dssp HHHHHHHHHTTSCCCTT---CEEEESSTTSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHHHHHHHHHhcCCCCC---CEEEEECCCCHHHHHHHHHHHH-----cCC-------EEEEEeC
Confidence 34444555322322233 69999998 8888888766653 342 5777776
No 481
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=52.36 E-value=16 Score=35.06 Aligned_cols=44 Identities=20% Similarity=0.103 Sum_probs=26.7
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCc-cHHHHHHHHHHHH
Q 011618 298 GTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQ 344 (481)
Q Consensus 298 GTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GA-GsAg~GiA~ll~~ 344 (481)
++-...++..+.|+......-.. ++++|.|| |..|..+++++..
T Consensus 124 a~l~~~~~ta~~al~~~~~~~~g---~~vlV~Ga~ggiG~~~~~~~~~ 168 (333)
T 1v3u_A 124 GTIGMPGLTAYFGLLEVCGVKGG---ETVLVSAAAGAVGSVVGQIAKL 168 (333)
T ss_dssp TTTSHHHHHHHHHHHTTSCCCSS---CEEEEESTTBHHHHHHHHHHHH
T ss_pred HHhCChHHHHHHHHHHhhCCCCC---CEEEEecCCCcHHHHHHHHHHH
Confidence 33334444555565332222234 79999998 8888888777654
No 482
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=52.29 E-value=12 Score=37.14 Aligned_cols=55 Identities=18% Similarity=0.162 Sum_probs=32.8
Q ss_pred chhHHHHHHHHHHHHHHhC-CCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 297 QGTAGVALAGLLGTVRAQG-LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 297 QGTaaV~LAgll~Alr~~g-~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
++.....++..+.|++..+ .+ . +++|+|.|+|..|...+++... .|. .+++.+|+
T Consensus 173 ~Aa~~~~~~ta~~al~~~~~~~-~---g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 228 (380)
T 1vj0_A 173 LAMAMCSGATAYHAFDEYPESF-A---GKTVVIQGAGPLGLFGVVIARS-----LGA------ENVIVIAG 228 (380)
T ss_dssp HHHHTTHHHHHHHHHHTCSSCC-B---TCEEEEECCSHHHHHHHHHHHH-----TTB------SEEEEEES
T ss_pred hHhhhcHHHHHHHHHHhcCCCC-C---CCEEEEECcCHHHHHHHHHHHH-----cCC------ceEEEEcC
Confidence 3333334445556665443 22 2 3699999999888877765543 242 36887774
No 483
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=52.24 E-value=6.9 Score=35.96 Aligned_cols=95 Identities=18% Similarity=0.263 Sum_probs=53.3
Q ss_pred eEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhh---hccccccCCcCCcCCCCCH
Q 011618 325 KIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAA---APFAKDPGDFMGLREGASL 400 (481)
Q Consensus 325 riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k---~~fA~~~~~~~~~~~~~~L 400 (481)
||+|.|| |-.|..+++.|.+. ..| -+++.++++. +...... ..+..- ++ .+..++
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~------~~~~~~~~~~~~~~~~--D~---~d~~~~ 59 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKT---VPA-------SQIVAIVRNP------AKAQALAAQGITVRQA--DY---GDEAAL 59 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT------TTCHHHHHTTCEEEEC--CT---TCHHHH
T ss_pred CEEEEcCCchHHHHHHHHHHhh---CCC-------ceEEEEEcCh------HhhhhhhcCCCeEEEc--CC---CCHHHH
Confidence 5899998 88888887777542 013 2578777631 1121111 111110 11 123458
Q ss_pred HHHhcccCCcEEEeecCCCC----CCCHHHHHHhhhcCCCCCEEEec
Q 011618 401 LEVVRKVKPHVLLGLSGVGG----VFNEEVLKAMRESDSVKPAIFAM 443 (481)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~g----~Ft~evv~~Ma~~~~erPIIFaL 443 (481)
.+++++ +|++|=+++... ..+..++++|.+ ..-+.|||.=
T Consensus 60 ~~~~~~--~d~vi~~a~~~~~~~~~~~~~l~~a~~~-~~~~~~v~~S 103 (286)
T 2zcu_A 60 TSALQG--VEKLLLISSSEVGQRAPQHRNVINAAKA-AGVKFIAYTS 103 (286)
T ss_dssp HHHTTT--CSEEEECC--------CHHHHHHHHHHH-HTCCEEEEEE
T ss_pred HHHHhC--CCEEEEeCCCCchHHHHHHHHHHHHHHH-cCCCEEEEEC
Confidence 888887 799998776321 246788888864 3445677743
No 484
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=52.05 E-value=19 Score=34.33 Aligned_cols=39 Identities=15% Similarity=0.221 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHH
Q 011618 302 VALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQ 344 (481)
Q Consensus 302 V~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~ 344 (481)
..++..+.|++..+.+ .. ++|+|+|||+.|...+.+...
T Consensus 126 ~~~~ta~~al~~~~~~-~g---~~VlV~GaG~vG~~a~qlak~ 164 (315)
T 3goh_A 126 CPLLTAWQAFEKIPLT-KQ---REVLIVGFGAVNNLLTQMLNN 164 (315)
T ss_dssp HHHHHHHHHHTTSCCC-SC---CEEEEECCSHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhhcCCC-CC---CEEEEECCCHHHHHHHHHHHH
Confidence 4455556666433333 23 699999999988887766554
No 485
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=52.01 E-value=9.1 Score=40.11 Aligned_cols=35 Identities=40% Similarity=0.595 Sum_probs=28.0
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccee
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 370 (481)
..|||+|||.||+..|-.+.+. |+ ++.++++...+
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~-----G~-------~V~vlEk~~~~ 156 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKA-----GA-------NVILVDKAPFS 156 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEeCCCCC
Confidence 6899999999999999877653 53 68899887544
No 486
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=52.01 E-value=46 Score=31.06 Aligned_cols=102 Identities=20% Similarity=0.172 Sum_probs=54.7
Q ss_pred CCceEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCCh-------hhhccccccCCcCC
Q 011618 322 ADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDP-------AAAPFAKDPGDFMG 393 (481)
Q Consensus 322 ~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~-------~k~~fA~~~~~~~~ 393 (481)
++.+|+|.|| |-.|..+++.|.+ .| -+++.++++-- ....+.. ....+... .+
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~-~D--- 70 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLE-----HG-------YKVRGTARSAS---KLANLQKRWDAKYPGRFETAVV-ED--- 70 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSHH---HHHHHHHHHHHHSTTTEEEEEC-SC---
T ss_pred CCCEEEEECCccHHHHHHHHHHHH-----CC-------CEEEEEeCCcc---cHHHHHHHhhccCCCceEEEEe-cC---
Confidence 3489999998 8888888887764 34 26777776410 0000100 00111100 01
Q ss_pred cCCCCCHHHHhcccCCcEEEeecCCCCC-------------CCHHHHHHhhhcCCCCCEEEecC
Q 011618 394 LREGASLLEVVRKVKPHVLLGLSGVGGV-------------FNEEVLKAMRESDSVKPAIFAMS 444 (481)
Q Consensus 394 ~~~~~~L~e~V~~vkptvLIG~S~~~g~-------------Ft~evv~~Ma~~~~erPIIFaLS 444 (481)
..+..++.++++. +|++|=+.+.... -|..+++++.+...-+.|||.=|
T Consensus 71 ~~d~~~~~~~~~~--~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS 132 (342)
T 1y1p_A 71 MLKQGAYDEVIKG--AAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSS 132 (342)
T ss_dssp TTSTTTTTTTTTT--CSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECC
T ss_pred CcChHHHHHHHcC--CCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecc
Confidence 1123456677764 8999987764331 13455666642233467888544
No 487
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=52.01 E-value=7.8 Score=39.35 Aligned_cols=35 Identities=20% Similarity=0.319 Sum_probs=28.2
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccee
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 370 (481)
.+|+|+|||-+|+..|-.|.. .| .++.+++++.-+
T Consensus 12 ~dvvVIGaG~~GL~aA~~La~-----~G-------~~V~vlE~~~~~ 46 (453)
T 2bcg_G 12 YDVIVLGTGITECILSGLLSV-----DG-------KKVLHIDKQDHY 46 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CC-------CeEEEEeCCCCC
Confidence 689999999999999988765 35 468889987543
No 488
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=51.83 E-value=7.1 Score=39.45 Aligned_cols=32 Identities=22% Similarity=0.434 Sum_probs=24.9
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|+|+|||.+|+..|..|.. .|. ++.++++.
T Consensus 14 ~~v~iiG~G~~Gl~aA~~l~~-----~g~-------~v~v~E~~ 45 (504)
T 1sez_A 14 KRVAVIGAGVSGLAAAYKLKI-----HGL-------NVTVFEAE 45 (504)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----TSC-------EEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHH-----CCC-------cEEEEEeC
Confidence 689999999999999988764 352 56666654
No 489
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=51.81 E-value=7.8 Score=42.65 Aligned_cols=35 Identities=34% Similarity=0.546 Sum_probs=28.3
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccce
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 369 (481)
.+|+|+|||.+|+.+|..|.+ .|. .++.++|+..+
T Consensus 5 ~dVvIIGgGi~Gls~A~~La~-----~G~------~~V~vlE~~~~ 39 (830)
T 1pj5_A 5 PRIVIIGAGIVGTNLADELVT-----RGW------NNITVLDQGPL 39 (830)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEECSSCT
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CCC------CcEEEEeCCCC
Confidence 689999999999999988765 353 26889998654
No 490
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=51.78 E-value=28 Score=33.32 Aligned_cols=89 Identities=15% Similarity=0.152 Sum_probs=47.7
Q ss_pred eEEEeCccHHHHHH-HHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHHH
Q 011618 325 KIVVVGAGSAGLGV-LKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (481)
Q Consensus 325 riv~~GAGsAg~Gi-A~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e~ 403 (481)
||.|+|+|..|..+ ++.+.. .|. +-+.++|++ .+..+.+++.... . ....++.|+
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~-----~~~------~~vav~d~~----------~~~~~~~~~~~g~-~--~~~~~~~~~ 57 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRA-----TGG------EVVSMMSTS----------AERGAAYATENGI-G--KSVTSVEEL 57 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHH-----TTC------EEEEEECSC----------HHHHHHHHHHTTC-S--CCBSCHHHH
T ss_pred eEEEEcccHHHHHhhhHHhhc-----CCC------eEEEEECCC----------HHHHHHHHHHcCC-C--cccCCHHHH
Confidence 79999999887765 554432 232 234466653 1111233332110 0 124679999
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCEEE
Q 011618 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIF 441 (481)
Q Consensus 404 V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIF 441 (481)
++.-++|+++ +++ |.....+++....+ ..++|+.
T Consensus 58 l~~~~~D~V~-i~t-p~~~h~~~~~~al~--~Gk~v~~ 91 (332)
T 2glx_A 58 VGDPDVDAVY-VST-TNELHREQTLAAIR--AGKHVLC 91 (332)
T ss_dssp HTCTTCCEEE-ECS-CGGGHHHHHHHHHH--TTCEEEE
T ss_pred hcCCCCCEEE-EeC-ChhHhHHHHHHHHH--CCCeEEE
Confidence 9876789888 444 33344444444323 3466653
No 491
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=51.78 E-value=9.9 Score=42.23 Aligned_cols=34 Identities=26% Similarity=0.498 Sum_probs=27.3
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccce
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 369 (481)
.+|+|+|||.||+..|..|... | .++.++++..-
T Consensus 337 ~~v~viG~G~~Gl~aA~~l~~~-----g-------~~v~v~E~~~~ 370 (776)
T 4gut_A 337 KSVIIIGAGPAGLAAARQLHNF-----G-------IKVTVLEAKDR 370 (776)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----T-------CEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEecccc
Confidence 6899999999999999888764 4 36888887543
No 492
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=51.78 E-value=16 Score=35.81 Aligned_cols=32 Identities=28% Similarity=0.411 Sum_probs=22.7
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
++|+|+|||..|..++.+... .|. ++++.+|+
T Consensus 193 ~~VlV~GaG~vG~~a~qla~~-----~Ga------~~Vi~~~~ 224 (374)
T 2jhf_A 193 STCAVFGLGGVGLSVIMGCKA-----AGA------ARIIGVDI 224 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 699999999888777665543 343 36777764
No 493
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=51.61 E-value=18 Score=34.07 Aligned_cols=97 Identities=16% Similarity=0.164 Sum_probs=52.2
Q ss_pred ceEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCCCCCChhhhccccccCCcCCcCCCCCHHH
Q 011618 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (481)
Q Consensus 324 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (481)
.||+|.|| |-.|..+++.|.+ .| .+++.+|++.- ....+......+..- + ..+..++.+
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~l~~~~~~~~~~--D---l~d~~~~~~ 73 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRA-----AG-------HDLVLIHRPSS---QIQRLAYLEPECRVA--E---MLDHAGLER 73 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEECTTS---CGGGGGGGCCEEEEC--C---TTCHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEecChH---hhhhhccCCeEEEEe--c---CCCHHHHHH
Confidence 38999997 8888888887765 34 36888877420 001111111111110 1 112345888
Q ss_pred HhcccCCcEEEeecCCCCCC--------------CHHHHHHhhhcCCCCCEEEec
Q 011618 403 VVRKVKPHVLLGLSGVGGVF--------------NEEVLKAMRESDSVKPAIFAM 443 (481)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~F--------------t~evv~~Ma~~~~erPIIFaL 443 (481)
++++ +|++|=+.+..+.. +..+++++.+ ..-+.|||.=
T Consensus 74 ~~~~--~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~~v~~S 125 (342)
T 2x4g_A 74 ALRG--LDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQ-ARVPRILYVG 125 (342)
T ss_dssp HTTT--CSEEEEC------------CHHHHHHHHHHHHHHHHHH-HTCSCEEEEC
T ss_pred HHcC--CCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEEC
Confidence 8886 89999877643311 3456777754 3446788743
No 494
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=51.58 E-value=26 Score=33.59 Aligned_cols=20 Identities=30% Similarity=0.444 Sum_probs=16.5
Q ss_pred eEEEeCc-cHHHHHHHHHHHH
Q 011618 325 KIVVVGA-GSAGLGVLKMAVQ 344 (481)
Q Consensus 325 riv~~GA-GsAg~GiA~ll~~ 344 (481)
+|+|.|| |..|...+++...
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~ 173 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNK 173 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHH
T ss_pred eEEEECCCCHHHHHHHHHHHH
Confidence 8999998 9998888776654
No 495
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=51.38 E-value=39 Score=32.00 Aligned_cols=96 Identities=21% Similarity=0.279 Sum_probs=56.0
Q ss_pred ceEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccceeecCC-CCCChhh----------hccccccCCc
Q 011618 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAA----------APFAKDPGDF 391 (481)
Q Consensus 324 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~k----------~~fA~~~~~~ 391 (481)
.+|+|.|| |-.|..+++.|++ .| .+++.+++..- .. ..+.... ..+..- +
T Consensus 26 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--D- 87 (351)
T 3ruf_A 26 KTWLITGVAGFIGSNLLEKLLK-----LN-------QVVIGLDNFST---GHQYNLDEVKTLVSTEQWSRFCFIEG--D- 87 (351)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCSS---CCHHHHHHHHHTSCHHHHTTEEEEEC--C-
T ss_pred CeEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeCCCC---CchhhhhhhhhccccccCCceEEEEc--c-
Confidence 89999997 8888888888765 34 36888877421 00 0011111 011110 0
Q ss_pred CCcCCCCCHHHHhcccCCcEEEeecCCCCC----------------CCHHHHHHhhhcCCCCCEEEe
Q 011618 392 MGLREGASLLEVVRKVKPHVLLGLSGVGGV----------------FNEEVLKAMRESDSVKPAIFA 442 (481)
Q Consensus 392 ~~~~~~~~L~e~V~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~~erPIIFa 442 (481)
..+..++.+++++ +|++|=+.+.... -|..+++++.+ ..-+.+||.
T Consensus 88 --l~d~~~~~~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~-~~~~~~v~~ 149 (351)
T 3ruf_A 88 --IRDLTTCEQVMKG--VDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKN-AQVQSFTYA 149 (351)
T ss_dssp --TTCHHHHHHHTTT--CSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHH-TTCSEEEEE
T ss_pred --CCCHHHHHHHhcC--CCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHH-cCCCEEEEE
Confidence 1123458888885 9999988764321 13347888854 455678885
No 496
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=51.33 E-value=8.7 Score=37.79 Aligned_cols=31 Identities=29% Similarity=0.459 Sum_probs=25.4
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.+|.|+|+|..|.+||..+. + |. +++++|+.
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-a-----G~-------~V~v~d~~ 43 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-S-----KH-------EVVLQDVS 43 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T-----TS-------EEEEECSC
T ss_pred CeEEEEeeCHHHHHHHHHHH-c-----CC-------EEEEEECC
Confidence 68999999999999999988 6 32 57777753
No 497
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=51.31 E-value=9.3 Score=38.30 Aligned_cols=36 Identities=22% Similarity=0.426 Sum_probs=27.5
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccce
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 369 (481)
.+|+|+|+|.||+..|..+.... .| .++.++++...
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~---~g-------~~V~v~e~~~~ 101 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNR---PD-------LKVCIIESSVA 101 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHC---TT-------SCEEEECSSSS
T ss_pred CCEEEECccHHHHHHHHHHHhcC---CC-------CeEEEEecCcc
Confidence 68999999999999998876530 14 36888888543
No 498
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=51.22 E-value=38 Score=34.88 Aligned_cols=34 Identities=21% Similarity=0.323 Sum_probs=26.5
Q ss_pred ceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 011618 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (481)
Q Consensus 324 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 367 (481)
.||.|+|+|..|..+|..+.... .| -+++++|++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g---~G-------~~V~~~d~~ 39 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMC---PE-------IRVTVVDVN 39 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHC---TT-------SEEEEECSC
T ss_pred cEEEEECCCHHHHHHHHHHHhcC---CC-------CEEEEEECC
Confidence 48999999999999999987641 02 358888874
No 499
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=50.97 E-value=16 Score=35.37 Aligned_cols=44 Identities=16% Similarity=0.254 Sum_probs=28.4
Q ss_pred HHHHHHHhCCCCCCCCCceEEEeCccHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 307 LLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 307 ll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
.+.|++..+.+. . ++|+|.|||..|..+++++.. .|. +++.+|+
T Consensus 153 a~~~l~~~~~~~-g---~~VlV~GaG~vG~~~~~~a~~-----~Ga-------~Vi~~~~ 196 (339)
T 1rjw_A 153 TYKALKVTGAKP-G---EWVAIYGIGGLGHVAVQYAKA-----MGL-------NVVAVDI 196 (339)
T ss_dssp HHHHHHHHTCCT-T---CEEEEECCSTTHHHHHHHHHH-----TTC-------EEEEECS
T ss_pred HHHHHHhcCCCC-C---CEEEEECCCHHHHHHHHHHHH-----cCC-------EEEEEeC
Confidence 455666554433 3 699999998877777665543 342 5777764
No 500
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=50.61 E-value=25 Score=33.30 Aligned_cols=48 Identities=15% Similarity=0.243 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCc-cHHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 011618 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (481)
Q Consensus 303 ~LAgll~Alr~~g~~l~dl~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 366 (481)
.++..+.|++..+ --.. ++++|.|| |..|..+++++.. .|. +++.+|+
T Consensus 110 ~~~ta~~~l~~~~-~~~g---~~vlV~Ga~G~vG~~~~~~a~~-----~Ga-------~Vi~~~~ 158 (302)
T 1iz0_A 110 SFLTAYLALKRAQ-ARPG---EKVLVQAAAGALGTAAVQVARA-----MGL-------RVLAAAS 158 (302)
T ss_dssp HHHHHHHHHHHTT-CCTT---CEEEESSTTBHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHHHHHHHHHHhc-CCCC---CEEEEECCCcHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 3444555665444 2233 79999998 9888887776543 342 5777776
Done!