Your job contains 1 sequence.
>011621
MEKEDLLMNEGVNSTPPTWSSCNFSSEKVITNCCLNPNWDYSMDQSDPFEAALSSIVSSP
AASNAPTTCSVIIPADGGGDNVMIRELIGRLGSICNSGEVLPQSYIQAQNNNNSNTCCYS
TPLNSPPLPKLNLSMIRGSKSSNNLPIPAADPGFAERAARLSCFAGSQMNMNSSVSASDS
KKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPK
VVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVR
REKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNM
EALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALN
SSLHRNHNIQLPPINGHGEVGPRVPSLWDDDLQSLVQMGFNQNQPRSLNGSMATTQMKIE
M
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011621
(481 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q5N802 - symbol:P0004D12.24 "BHLH transcription... 618 1.2e-67 2
TAIR|locus:2152551 - symbol:AT5G48560 "AT5G48560" species... 612 1.0e-59 1
TAIR|locus:2079676 - symbol:AT3G07340 "AT3G07340" species... 585 7.5e-57 1
TAIR|locus:2095198 - symbol:AT3G23690 "AT3G23690" species... 521 4.6e-50 1
TAIR|locus:2205420 - symbol:AT1G68920 species:3702 "Arabi... 475 1.1e-48 2
UNIPROTKB|Q84QW1 - symbol:OJ1191_A10.109 "BHLH transcript... 504 2.9e-48 1
UNIPROTKB|Q69JJ6 - symbol:OSJNBa0026C08.22 "TA1 protein-l... 435 3.7e-46 2
TAIR|locus:2028804 - symbol:CIB5 "AT1G26260" species:3702... 476 2.7e-45 1
UNIPROTKB|Q5VR96 - symbol:P0038C05.31-1 "Os06g0275600 pro... 433 9.6e-44 2
TAIR|locus:2201906 - symbol:AT1G10120 "AT1G10120" species... 413 3.6e-42 2
TAIR|locus:2139484 - symbol:CIB1 "AT4G34530" species:3702... 410 2.6e-38 1
UNIPROTKB|Q84LH4 - symbol:OSJNBb0011H13.2 "Putative Helix... 393 1.7e-36 1
UNIPROTKB|Q6Z2G7 - symbol:P0680A05.9 "Putative bHLH trans... 386 9.2e-36 1
UNIPROTKB|Q84T08 - symbol:OSJNBa0087C10.10 "BHLH transcri... 379 5.1e-35 1
TAIR|locus:2202867 - symbol:BPEp "AT1G59640" species:3702... 379 5.1e-35 1
UNIPROTKB|Q6ZCV8 - symbol:P0028A08.20 "Os08g0487700 prote... 377 8.3e-35 1
TAIR|locus:2115200 - symbol:BEE2 "AT4G36540" species:3702... 375 1.3e-34 1
TAIR|locus:2053766 - symbol:AT2G42300 "AT2G42300" species... 367 9.5e-34 1
TAIR|locus:505006688 - symbol:AT5G50915 "AT5G50915" speci... 359 6.7e-33 1
UNIPROTKB|Q75M33 - symbol:P0668H12.5 "BHLH transcription ... 358 8.5e-33 1
TAIR|locus:2172209 - symbol:AT5G62610 "AT5G62610" species... 353 2.9e-32 1
UNIPROTKB|Q8GZV6 - symbol:OJ1017C11.10 "Putative uncharac... 360 4.5e-32 1
UNIPROTKB|Q69WS3 - symbol:OJ1118_E12.15 "Putative bHLH pr... 347 1.3e-31 1
TAIR|locus:2032990 - symbol:CES "AT1G25330" species:3702 ... 326 2.1e-29 1
TAIR|locus:2014144 - symbol:BEE1 "BR enhanced expression ... 315 3.1e-28 1
TAIR|locus:2027809 - symbol:BEE3 "AT1G73830" species:3702... 311 8.2e-28 1
TAIR|locus:2076581 - symbol:AT3G57800 "AT3G57800" species... 200 2.1e-25 2
UNIPROTKB|Q7Y1H4 - symbol:OSJNBa0094F01.11 "Putative unch... 221 9.9e-20 2
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 236 2.8e-19 1
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 235 3.6e-19 1
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 231 3.6e-17 1
UNIPROTKB|Q6Z7E7 - symbol:P0020C11.18 "Putative bHLH tran... 226 1.6e-16 2
TAIR|locus:2007534 - symbol:AT1G03040 "AT1G03040" species... 206 2.3e-16 2
TAIR|locus:2132303 - symbol:UNE12 "AT4G02590" species:370... 210 1.9e-15 2
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 214 8.1e-15 1
UNIPROTKB|Q69WX7 - symbol:P0417G12.19 "Basic helix-loop-h... 195 8.8e-15 1
UNIPROTKB|Q6EPZ6 - symbol:P0014G10.34 "BHLH transcription... 216 9.2e-15 1
UNIPROTKB|Q6Z1F9 - symbol:OSJNBa0033D24.39 "BHLH transcri... 185 1.1e-13 1
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 203 2.4e-13 1
UNIPROTKB|Q8S490 - symbol:rau1 "Transcription factor RAU1... 165 1.6e-11 1
UNIPROTKB|Q6K8Y4 - symbol:OJ1695_H09.18 "Basic helix-loop... 148 5.1e-11 2
TAIR|locus:2141573 - symbol:FBH2 "AT4G09180" species:3702... 173 5.9e-11 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 177 6.1e-11 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 164 6.9e-11 2
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 156 1.5e-10 1
TAIR|locus:2199221 - symbol:RSL4 "AT1G27740" species:3702... 149 3.7e-10 2
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 180 4.3e-10 2
TAIR|locus:2008693 - symbol:FBH1 "AT1G35460" species:3702... 165 5.7e-10 1
TAIR|locus:4010713916 - symbol:AT4G28815 species:3702 "Ar... 168 6.1e-10 1
TAIR|locus:4010713915 - symbol:AT4G28811 species:3702 "Ar... 179 6.3e-10 2
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 165 1.2e-09 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 152 1.3e-09 1
TAIR|locus:2059979 - symbol:FBH4 "AT2G42280" species:3702... 167 1.3e-09 1
TAIR|locus:2026037 - symbol:FBH3 "AT1G51140" species:3702... 167 1.5e-09 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 168 1.7e-09 1
TAIR|locus:2117773 - symbol:AT4G28790 species:3702 "Arabi... 167 1.8e-09 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 169 2.0e-09 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 166 2.4e-09 1
TAIR|locus:2041369 - symbol:PIL1 "phytochrome interacting... 160 1.1e-08 1
TAIR|locus:2117788 - symbol:AT4G28800 species:3702 "Arabi... 159 1.7e-08 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 157 1.9e-08 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 157 2.2e-08 1
TAIR|locus:2118934 - symbol:RSL2 "AT4G33880" species:3702... 152 6.1e-08 1
TAIR|locus:504954900 - symbol:AT5G43175 "AT5G43175" speci... 144 8.3e-08 1
UNIPROTKB|Q2QMV9 - symbol:LOC_Os12g39850 "Helix-loop-heli... 149 9.1e-08 1
UNIPROTKB|Q67TR8 - symbol:B1342C04.6 "Basic helix-loop-he... 143 1.7e-07 1
UNIPROTKB|Q6Z9R3 - symbol:P0461F06.33 "BHLH protein famil... 142 1.7e-07 2
UNIPROTKB|Q7XT55 - symbol:OSJNBa0084K20.3 "OSJNBa0076N16.... 141 1.7e-07 1
UNIPROTKB|Q5TKP7 - symbol:OJ1362_G11.11 "Putative unchara... 124 2.3e-07 2
TAIR|locus:505006103 - symbol:AT1G05805 "AT1G05805" speci... 145 4.0e-07 1
TAIR|locus:2074865 - symbol:HEC2 "AT3G50330" species:3702... 138 5.9e-07 1
UNIPROTKB|Q6AV35 - symbol:OSJNBa0063J18.7 "Putative trans... 142 5.9e-07 1
UNIPROTKB|Q2QMM0 - symbol:LOC_Os12g40710 "Helix-loop-heli... 140 6.4e-07 1
TAIR|locus:2144791 - symbol:HEC3 "AT5G09750" species:3702... 133 1.0e-06 2
TAIR|locus:2089418 - symbol:AT3G21330 "AT3G21330" species... 126 1.3e-06 2
TAIR|locus:2155543 - symbol:HEC1 "HECATE 1" species:3702 ... 135 1.7e-06 1
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 137 2.4e-06 1
TAIR|locus:2163163 - symbol:PIF7 "AT5G61270" species:3702... 138 2.4e-06 1
UNIPROTKB|Q2QMN2 - symbol:LOC_Os12g40590 "Helix-loop-heli... 132 5.3e-06 1
UNIPROTKB|Q94LR3 - symbol:OSJNBa0010C11.7 "Helix-loop-hel... 125 7.4e-06 1
UNIPROTKB|Q9ASJ3 - symbol:P0439B06.24 "Putative uncharact... 129 1.5e-05 1
TAIR|locus:2098008 - symbol:PIL2 "phytochrome interacting... 129 2.4e-05 1
UNIPROTKB|Q8W5G3 - symbol:OSJNBa0002J24.23 "Helix-loop-he... 119 5.2e-05 2
TAIR|locus:2028957 - symbol:RHD6 "AT1G66470" species:3702... 124 5.8e-05 1
UNIPROTKB|Q2R0R9 - symbol:LOC_Os11g41640 "Helix-loop-heli... 119 0.00011 2
UNIPROTKB|Q6ZFY4 - symbol:OJ1311_H06.19 "BHLH protein-lik... 121 0.00013 1
UNIPROTKB|Q8S0N2 - symbol:P0692C11.41-1 "BHLH transcripti... 123 0.00013 1
TAIR|locus:2156015 - symbol:RSL1 "AT5G37800" species:3702... 121 0.00019 2
UNIPROTKB|Q69TX2 - symbol:P0021C04.13 "BHLH protein-like"... 115 0.00023 1
UNIPROTKB|Q2QML8 - symbol:LOC_Os12g40730 "Helix-loop-heli... 120 0.00027 1
UNIPROTKB|Q651K2 - symbol:B1089G05.30 "BHLH protein-like"... 117 0.00035 1
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 121 0.00041 1
TAIR|locus:2199307 - symbol:AT1G68240 species:3702 "Arabi... 110 0.00051 1
RGD|3092 - symbol:Mitf "microphthalmia-associated transcr... 95 0.00061 1
UNIPROTKB|O88368 - symbol:Mitf "Microphthalmia-associated... 95 0.00061 1
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 116 0.00066 1
TAIR|locus:504954829 - symbol:GL3 "AT5G41315" species:370... 119 0.00074 1
TAIR|locus:2126856 - symbol:IND "AT4G00120" species:3702 ... 109 0.00094 1
>UNIPROTKB|Q5N802 [details] [associations]
symbol:P0004D12.24 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008207 eggNOG:NOG283912 EMBL:AP003433 EMBL:HQ858864
EMBL:AK101063 RefSeq:NP_001045188.1 UniGene:Os.5763
EnsemblPlants:LOC_Os01g68700.2 GeneID:4324327 KEGG:osa:4324327
ProtClustDB:CLSN2692207 Uniprot:Q5N802
Length = 481
Score = 618 (222.6 bits), Expect = 1.2e-67, Sum P(2) = 1.2e-67
Identities = 142/291 (48%), Positives = 176/291 (60%)
Query: 197 ADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQ 256
A K S TS DS+ ++ KS + A + K N E+ + +
Sbjct: 202 ASGKGKGKDSPMSTSAAKEDSSGKRCKSTEESNAAAEENSGKGKAAQSNSENGGGKKQGK 261
Query: 257 DEXXXXXXXXXXXXXPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVP 316
D P EPPKDYIHVRARRG+ATDSHSLAERVRREKIS+RMK LQDLVP
Sbjct: 262 DSSSK----------PPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVP 311
Query: 317 GCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLN-MEALLSKDLFQSCGYV 375
GCNKV GKAVMLDEIINYVQSLQRQVEFLSMKLATVNP++D N + LL+KD+ QSC +
Sbjct: 312 GCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNNLPNLLAKDMHQSCSPL 371
Query: 376 QHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPIN 435
Q S +P + S P QPQQG+ L G+ N +NQ S++ L+ + R P +N
Sbjct: 372 QSSHFPLETSGAPLPYINQPQQGNPL-GCGLTNGMDNQGSMHPLDPAFCRPMGSHHPFLN 430
Query: 436 GHGEVGPRVPSLWDDDLQSLVQMGFNQNQP-----RSLNGSMATTQMKIEM 481
G + +V + W DDLQS+VQM Q+Q S NGS+ T MK+E+
Sbjct: 431 GVSDAASQVGAFWQDDLQSVVQMDMGQSQEIATSSNSYNGSLQTVHMKMEL 481
Score = 109 (43.4 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 42/124 (33%), Positives = 63/124 (50%)
Query: 150 ADPGFAERAARLSCF-------------AG-SQMNMNSSVSASDSKKLRVSRSSTPESNN 195
ADPGFAERAARLS F AG +Q + + +A SK++ + +T + ++
Sbjct: 119 ADPGFAERAARLSGFDARGGGGGGGYGGAGPAQFGLPDAGAAGASKEMELG--NTRDESS 176
Query: 196 NADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETP-PTSDPKVVAENPEDSNSMRS 254
+D G + +I + +D N RKRK+ + K K++P TS K EDS+ R
Sbjct: 177 VSDPAPGGA---EIPPKGASDGNARKRKASGKGKGKDSPMSTSAAK------EDSSGKRC 227
Query: 255 KQDE 258
K E
Sbjct: 228 KSTE 231
Score = 87 (35.7 bits), Expect = 1.2e-67, Sum P(2) = 1.2e-67
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 32 NCCLNPNWDYSMDQS--DPFEAALSSIVSSPAASNAPTTCSVIIPAD--GGG 79
+C LN NWD SMD + + ALSS+VSSPA SN+ I P GGG
Sbjct: 16 SCFLNLNWDQSMDAAAGGHLDPALSSMVSSPA-SNSTGALHGISPQPHYGGG 66
>TAIR|locus:2152551 [details] [associations]
symbol:AT5G48560 "AT5G48560" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB015468 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 eggNOG:NOG283912
ProtClustDB:CLSN2684837 EMBL:AF488610 EMBL:BT002945 EMBL:BT005637
IPI:IPI00543091 RefSeq:NP_199667.1 UniGene:At.43769
ProteinModelPortal:Q9FJL4 SMR:Q9FJL4 IntAct:Q9FJL4 PaxDb:Q9FJL4
PRIDE:Q9FJL4 EnsemblPlants:AT5G48560.1 GeneID:834912
KEGG:ath:AT5G48560 TAIR:At5g48560 InParanoid:Q9FJL4 OMA:SASCYAT
PhylomeDB:Q9FJL4 Genevestigator:Q9FJL4 Uniprot:Q9FJL4
Length = 498
Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
Identities = 178/469 (37%), Positives = 248/469 (52%)
Query: 39 WDYSMDQSDP---FEAALSSIVSSPAASNAPTTCSVIIPADGGGDNVMIRELIGRLGSIC 95
W+ S +Q F++ALSS+VSSP SN+ + GGGD +IRELIG+LG+I
Sbjct: 50 WEKSTEQQQQQSIFDSALSSLVSSPTPSNSNFS-------GGGGDGFLIRELIGKLGNIG 102
Query: 96 NSGEVLPQSYIQAQXXXXXXTCCYSTXXXXXXXXXXXXXMIRGSKSSNNLPIPAADPGFA 155
N+ + Y CY+T + ++++ L +ADPGFA
Sbjct: 103 NNNNNSGEIYGTPMSRSAS---CYATPMSSPPPPTNSNSQMMMNRTTP-LTEFSADPGFA 158
Query: 156 ERAARLSCFAGSQMN--MNSSVSASDSKKL-----RVSR-SSTP--ESNNNADSKEGSSL 205
ERAAR SCF N N+++ ++ + +++R SSTP ++ + + G
Sbjct: 159 ERAARFSCFGSRSFNGRTNTNLPINNGNNMVNNSGKLTRVSSTPALKALVSPEVTPGGEF 218
Query: 206 SEQITS--QTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDEXXXXX 263
S + S + + NP S P +T + K +++ E+ R +++E
Sbjct: 219 SRKRKSVPKGKSKENPISTAS-PSPSFSKTAEKNGGKGGSKSSEEKGGKRRREEEDDEEE 277
Query: 264 XXX-----XXXXXPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC 318
P EPPKDYIHVRARRGQATDSHSLAERVRREKI ERMK LQDLVPGC
Sbjct: 278 EGEGEGNKSNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGC 337
Query: 319 NKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP-RMDLNMEALLSKDLFQSCGYVQH 377
NKVTGKA+MLDEIINYVQSLQRQVEFLSMKL++VN R+D N++AL+SKD+ +
Sbjct: 338 NKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVDALVSKDVMIPSS--NN 395
Query: 378 SLYPGDCSVQTFPSRYQPQ-----QGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLP 432
L+ ++ +Q Q S L + +NN Q +N+L +S LP
Sbjct: 396 RLHEEGLQSKSSSHHHQQQLNIYNNNSQLLPNISSNNMMLQSPMNSLETSTLARSFTHLP 455
Query: 433 PINGHGEVGPRVPSLWDDDLQSLVQMGFNQNQPRSLNGSMATTQMKIEM 481
+ + + ++DLQS+V MG +N P N S MKIE+
Sbjct: 456 TLTQFTDSISQYQMFSEEDLQSIVGMGVAEN-PN--NESQ---HMKIEL 498
>TAIR|locus:2079676 [details] [associations]
symbol:AT3G07340 "AT3G07340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC009853 EMBL:AK175369 EMBL:AK175496
EMBL:AK176563 EMBL:AK176663 EMBL:BT026497 EMBL:AF488595
IPI:IPI00521004 RefSeq:NP_187390.1 UniGene:At.40357
ProteinModelPortal:Q9SRT2 SMR:Q9SRT2 EnsemblPlants:AT3G07340.1
GeneID:819922 KEGG:ath:AT3G07340 GeneFarm:2908 TAIR:At3g07340
eggNOG:NOG283912 InParanoid:Q9SRT2 OMA:MENELFM PhylomeDB:Q9SRT2
ProtClustDB:CLSN2684837 Genevestigator:Q9SRT2 Uniprot:Q9SRT2
Length = 456
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 151/351 (43%), Positives = 201/351 (57%)
Query: 139 SKSSNNLPIPAADPGFAERAARLSCFAGSQMNM--NSSVSASDSKKLRVSRSSTPESNNN 196
+K++ + + DPGFAERAAR SCF N NS ++ + + P +++
Sbjct: 126 TKTTTPMAELSGDPGFAERAARFSCFGSRSFNSRTNSPFPINNEPPI-TTNEKMPRVSSS 184
Query: 197 ADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPT--SDPKVVAENPEDSNSMRS 254
K L+ + + + RKRK+ K+K+ P+ S K + E EDS+ R
Sbjct: 185 PVFKP---LASHVPAGESSGELSRKRKT----KSKQNSPSAVSSSKEIEEK-EDSDPKRC 236
Query: 255 KQDEXXXXXXXXXXXXXPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDL 314
K+ E ++P KDYIHVRARRGQATDSHSLAERVRREKISERMK LQDL
Sbjct: 237 KKSEENGDKTKS------IDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 290
Query: 315 VPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGY 374
VPGCNKVTGKA+MLDEIINYVQSLQRQVEFLSMKL++VN R+D NM+ALLSKD+F S
Sbjct: 291 VPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFNMDALLSKDIFPSSNN 350
Query: 375 VQHSLYPGDCSVQTFPSRYQPQQGSHLTSS-GINNNAENQFSINALNSSLHRNHNIQLPP 433
+ H V S + G H + +N + + IN L +S R+ LP
Sbjct: 351 LMHHQ-----QVLQLDSSAETLLGDHHNKNLQLNPDISSNNVINPLETSETRSFISHLPT 405
Query: 434 INGHGEVGPRVPSLWDDDLQSLVQMGFNQNQPRSLN-GS--MATTQMKIEM 481
+ + + + +DDL S++ MGF QN+ + LN GS + MK E+
Sbjct: 406 LAHFTDSISQYSTFSEDDLHSIIHMGFAQNRLQELNQGSSNQVPSHMKAEL 456
Score = 202 (76.2 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 80/270 (29%), Positives = 124/270 (45%)
Query: 1 MEKEDLLMNEGVNSTP----PTWSSC-----NFSSEKVITNCCLNPNWDYSMDQSDPFEA 51
ME E L MN GV+ P P+ SS + ++ V + N W+ S +QS F++
Sbjct: 1 MENE-LFMNAGVSHPPVMTSPSSSSAMLKWVSMETQPVDPSLSRNLFWEKSTEQSI-FDS 58
Query: 52 ALSSIVSSPAASNAPTTCSVIIPADGGGDNVMIRELIGRLGSICNSGEVLPQSYIQAQXX 111
ALSS+VSSP SN+ + + GG+NV++RELIG+LG+I G++ I A
Sbjct: 59 ALSSLVSSPTPSNSNFSVGGV-----GGENVIMRELIGKLGNI---GDIYG---ITASNG 107
Query: 112 XXXXTCCYSTXXXXXXXXXXXXXMIRGSKSSNNLPIPAADPGFAERAARLSCFAGSQMNM 171
CY+T M+ +K++ + + DPGFAERAAR SCF N
Sbjct: 108 NS----CYATPMSSPPPGS----MME-TKTTTPMAELSGDPGFAERAARFSCFGSRSFNS 158
Query: 172 --NSSVSASDSKKLRVSR-----SSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKS 224
NS ++ + + SS+P A S +++ + T S +
Sbjct: 159 RTNSPFPINNEPPITTNEKMPRVSSSPVFKPLASHVPAGESSGELSRKRKTKSKQNSPSA 218
Query: 225 IQRPKAKETPPTSDPKVVAENPEDSNSMRS 254
+ K E SDPK ++ E+ + +S
Sbjct: 219 VSSSKEIEEKEDSDPKRCKKSEENGDKTKS 248
>TAIR|locus:2095198 [details] [associations]
symbol:AT3G23690 "AT3G23690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
EMBL:AP000377 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AY065441 EMBL:AY096536
EMBL:EU550216 EMBL:EU550217 EMBL:EU550218 EMBL:EU550219
EMBL:EU550220 EMBL:EU550221 EMBL:EU550222 EMBL:EU550223
EMBL:EU550224 EMBL:EU550225 EMBL:EU550226 EMBL:EU550227
EMBL:EU550228 EMBL:EU550229 EMBL:EU550230 EMBL:EU550231
EMBL:EU550232 EMBL:EU550233 EMBL:EU550234 EMBL:EU550235
EMBL:EU550236 EMBL:EU550237 EMBL:EU550238 EMBL:EU550239
EMBL:AF488609 IPI:IPI00545445 RefSeq:NP_189011.2 UniGene:At.6666
ProteinModelPortal:Q9LK48 SMR:Q9LK48 PaxDb:Q9LK48 PRIDE:Q9LK48
EnsemblPlants:AT3G23690.1 GeneID:821950 KEGG:ath:AT3G23690
TAIR:At3g23690 eggNOG:NOG292697 InParanoid:Q9LK48 OMA:MEFNANA
PhylomeDB:Q9LK48 ProtClustDB:CLSN2917952 Genevestigator:Q9LK48
Uniprot:Q9LK48
Length = 371
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 128/269 (47%), Positives = 156/269 (57%)
Query: 186 SRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTS-----DPK 240
S+ +T ESN ++ + S+S+++ + T SN RKRKSI KE+P +S + K
Sbjct: 85 SQPTTQESNKSS-LLDPDSVSDRVHT---TKSNSRKRKSIPSGNGKESPASSSLTASNSK 140
Query: 241 VVAENPEDSNSMRSKQD---------EXXXXXXXXXXXXXPVEPPKDYIHVRARRGQATD 291
V EN RSKQD E P E PKDYIHVRARRGQATD
Sbjct: 141 VSGENGGSKGGKRSKQDVAGSSKNGVEKCDSKGDNKDDAKPPEAPKDYIHVRARRGQATD 200
Query: 292 SHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAT 351
SHSLAER RREKISERM LQDLVPGCN++TGKAVMLDEIINYVQSLQRQVEFLSMKLAT
Sbjct: 201 SHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSMKLAT 260
Query: 352 VNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAE 411
VNPRM+ N A LS ++ Q + SLY CS Q PS Y G ++
Sbjct: 261 VNPRMEFNANASLSTEMIQPGESLTQSLYAMACSEQRLPSAYY-SLGKNMPRFSDTQFPS 319
Query: 412 NQFSINALNSSLHRNHNIQLPPINGHGEV 440
N ++ N+++Q G G++
Sbjct: 320 NDGFVHTETPGFWENNDLQSIVQMGFGDI 348
>TAIR|locus:2205420 [details] [associations]
symbol:AT1G68920 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AF488584 EMBL:AY128299
EMBL:BT002259 IPI:IPI00536565 IPI:IPI00545990 PIR:G96713
RefSeq:NP_001031255.1 RefSeq:NP_177058.1 RefSeq:NP_849863.2
UniGene:At.28096 ProteinModelPortal:Q9CAA9 SMR:Q9CAA9 STRING:Q9CAA9
EnsemblPlants:AT1G68920.1 EnsemblPlants:AT1G68920.2 GeneID:843225
KEGG:ath:AT1G68920 TAIR:At1g68920 eggNOG:NOG301979
HOGENOM:HOG000238007 InParanoid:Q3E6P7 OMA:MLKGGIF PhylomeDB:Q9CAA9
ProtClustDB:CLSN2682343 Genevestigator:Q9CAA9 Uniprot:Q9CAA9
Length = 486
Score = 475 (172.3 bits), Expect = 1.1e-48, Sum P(2) = 1.1e-48
Identities = 108/225 (48%), Positives = 142/225 (63%)
Query: 170 NMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPK 229
+++ +V S + ++ + P S N ++ + S + Q +T +++ RKR + +
Sbjct: 188 DVSVAVKESTVRSSEQAKPNVPGSGNVSEDTQSSGGNGQKGRETSSNTKKRKRNGQKNSE 247
Query: 230 AKETPPTSDPKVVAENPEDS--NSMRSKQDEXXXXXXXXXXXXXPVEPPKD-YIHVRARR 286
A ++ + + +N D N +S +PPKD YIHVRARR
Sbjct: 248 AAQSHRSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHVRARR 307
Query: 287 GQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 346
GQAT+SHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS
Sbjct: 308 GQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 367
Query: 347 MKLATVNPRMDLNMEALLSKDLFQ-SCGYVQHSLYPGDCSVQTFP 390
MKLATVNP+MD N+E LL+KD Q G + +P + S+ +P
Sbjct: 368 MKLATVNPQMDFNLEGLLAKDALQLRAGSSSTTPFPPNMSM-AYP 411
Score = 50 (22.7 bits), Expect = 1.1e-48, Sum P(2) = 1.1e-48
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 421 SSLHRNHNIQLPPINGHGEVGPRVPSLWDDDLQSLVQMGFNQNQ----PRSL-NGSMATT 475
SS+ R L P+NG + + + W+ DLQ+++ + + P++ S+
Sbjct: 423 SSIGRTITSPLSPMNGGFK--RQETNGWEGDLQNVIHINYGAGDVTPDPQAAATASLPAA 480
Query: 476 QMKIE 480
MK+E
Sbjct: 481 NMKVE 485
>UNIPROTKB|Q84QW1 [details] [associations]
symbol:OJ1191_A10.109 "BHLH transcription
factor(GBOF-1)-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP008214
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003888
RefSeq:NP_001062289.1 UniGene:Os.10830
EnsemblPlants:LOC_Os08g41320.1 GeneID:4346087 KEGG:osa:4346087
eggNOG:NOG320619 OMA:ERISQRM ProtClustDB:CLSN2697487 Uniprot:Q84QW1
Length = 405
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 137/332 (41%), Positives = 184/332 (55%)
Query: 164 FAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNADSK---EGSSLSEQITSQTVTDS--- 217
FAG SSVS S ++ + ++ + + A + +G + + +D
Sbjct: 93 FAGGGSREASSVSDPASSAMKDAAANAKKRKSTAAAAAAAKGKGKEPPVGEEKESDGKRC 152
Query: 218 ---NPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDEXXXXXXXXXXXXXPVE 274
N K S+ +PKA++ SD V ED KQ + PVE
Sbjct: 153 KTGNGEKESSV-KPKAEQAG--SDSSV-----EDGGGGGQKQGKGKNAK--------PVE 196
Query: 275 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINY 334
PPKDY+HVRARRGQATDSHSLAERVRRE+IS+RMK LQDLVPGCNKV GKA+MLDEIINY
Sbjct: 197 PPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINY 256
Query: 335 VQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQ 394
VQSLQRQVEFLSMKLATVNP N+ LL KD+FQ+CG S++ + S F R+
Sbjct: 257 VQSLQRQVEFLSMKLATVNPLDFSNLPTLLQKDMFQACGPSASSVFSLESSNSAF--RFA 314
Query: 395 PQQGSHLTSSGINNNAENQFSINALNSSLHRNHNI-QLPPINGHGEVGPRVPSLWDDDLQ 453
+QG + N+ E+Q ++N L+ +L + N Q +G + + W+DDLQ
Sbjct: 315 -EQGD-VFQQFAQNSMESQCTLNQLDLALSQATNAAQYAFQDGTAGANLQQRNFWEDDLQ 372
Query: 454 SLVQMGFNQNQPRSLN-----GSMATTQMKIE 480
S+ + Q+Q ++ G MK+E
Sbjct: 373 SVFHIENGQSQENGVSAPNFHGQQQAGHMKME 404
>UNIPROTKB|Q69JJ6 [details] [associations]
symbol:OSJNBa0026C08.22 "TA1 protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008215
ProtClustDB:CLSN2697804 EMBL:AP006169 EMBL:HQ858863 EMBL:AK121418
RefSeq:NP_001063455.1 UniGene:Os.38400
EnsemblPlants:LOC_Os09g29830.3 GeneID:4347355 KEGG:osa:4347355
Uniprot:Q69JJ6
Length = 428
Score = 435 (158.2 bits), Expect = 3.7e-46, Sum P(2) = 3.7e-46
Identities = 103/179 (57%), Positives = 117/179 (65%)
Query: 277 KDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQ 336
++YIHVRARRGQAT+SHSLAER+RREKISERMK LQDLVPGC+KVTGKAVMLDEIINYVQ
Sbjct: 243 EEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 302
Query: 337 SLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQ 396
SLQRQVEFLSMKLATVNPR+DLN+E LLSKDL + G S+ G P Q
Sbjct: 303 SLQRQVEFLSMKLATVNPRLDLNIEGLLSKDLLRFPGVPSSSI--GFSPEMMHPQLQLSQ 360
Query: 397 QGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLP-PINGH-GEVGPRV-PSLWDDDL 452
G L G A + + L Q+P +NG +V PSL DL
Sbjct: 361 PG--LIHGGTAGMANPDVFRRIIQAQLGAKDGSQMPHSLNGSFSDVSQMAYPSLGSQDL 417
Score = 66 (28.3 bits), Expect = 3.7e-46, Sum P(2) = 3.7e-46
Identities = 34/118 (28%), Positives = 51/118 (43%)
Query: 151 DPGFAERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPES---------NNNADSKE 201
D GF ERAAR +CF G M A+D + + + T E N+ A+
Sbjct: 100 DSGFIERAARSTCFGGGMM-AGGPYGAAD-QAMGDAFGGTAEGLMDHHRNVGNDKAEEFA 157
Query: 202 GSSLSEQITSQTVT-DSNPRKRKSIQRPKAKETPPTSDPKVVAEN-PEDS--NSMRSK 255
G+ E +S+ D + + S +R + E T +V + N P DS S+ SK
Sbjct: 158 GNGHDEVPSSEVAGGDCSSKGSDSKKRRRPNEVMGTD--QVHSSNLPSDSANESVHSK 213
>TAIR|locus:2028804 [details] [associations]
symbol:CIB5 "AT1G26260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009911 "positive regulation of flower development"
evidence=IGI] [GO:0048513 "organ development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC079829 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238007
EMBL:AK117355 EMBL:BT005334 EMBL:AJ630483 EMBL:AY568655
EMBL:AF488608 IPI:IPI00529982 IPI:IPI00547855 PIR:H86388
RefSeq:NP_001031093.1 RefSeq:NP_173950.1 RefSeq:NP_973913.1
UniGene:At.41276 ProteinModelPortal:Q9C670 SMR:Q9C670 IntAct:Q9C670
STRING:Q9C670 EnsemblPlants:AT1G26260.1 EnsemblPlants:AT1G26260.2
GeneID:839167 KEGG:ath:AT1G26260 TAIR:At1g26260 eggNOG:NOG284637
InParanoid:Q9C670 OMA:ETHGYES PhylomeDB:Q9C670
ProtClustDB:CLSN2682645 Genevestigator:Q9C670 Uniprot:Q9C670
Length = 390
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 127/301 (42%), Positives = 165/301 (54%)
Query: 150 ADPGFAERAARLSCFAGSQMNMN---SSVSASDSKKLRVSRSSTPESN--NNADSKEGSS 204
AD GF ERAA+ S F +M MN SS+ DS L + + P + +N + S
Sbjct: 79 ADSGFIERAAKFSFFGCGEMMMNQQQSSLGVPDSTGLFLQDTQIPSGSKLDNGPLTDASK 138
Query: 205 LSEQITSQTVT-DSNPRKRKSIQRPKAKETPP----TSDPKVVAENPEDSNSMRSKQDEX 259
L ++ + V+ DS K +T + K + ++ E+ + K ++
Sbjct: 139 LVKERSINNVSEDSQSSGGNGHDDAKCGQTSSKGFSSKKRKRIGKDCEEEEDKKQKDEQS 198
Query: 260 -XXXXXXXXXXXXPVEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPG 317
P + KD YIH+RARRGQAT+SHSLAERVRREKISERMKFLQDLVPG
Sbjct: 199 PTSNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPG 258
Query: 318 CNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYV-Q 376
C+KVTGKAVMLDEIINYVQSLQ Q+EFLSMKL+ VNP +D N+E+LL+KD QS
Sbjct: 259 CDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDFNLESLLAKDALQSSAPTFP 318
Query: 377 HS---LYPGDCSVQTFPSRYQPQQGS-HLTSSGINNNAENQFSINALNSSLHRNHNIQLP 432
H+ LYP S + QP S L S G+ + + + N +H NH
Sbjct: 319 HNMSMLYP-PVSYLSQTGFMQPNISSMSLLSGGLKRQETHGYESDHHNL-VHMNHETGTA 376
Query: 433 P 433
P
Sbjct: 377 P 377
>UNIPROTKB|Q5VR96 [details] [associations]
symbol:P0038C05.31-1 "Os06g0275600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003044 RefSeq:NP_001057380.1 UniGene:Os.32526
EnsemblPlants:LOC_Os06g16400.1 EnsemblPlants:LOC_Os06g16400.2
GeneID:4340749 KEGG:osa:4340749 ProtClustDB:CLSN2697804
Uniprot:Q5VR96
Length = 437
Score = 433 (157.5 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
Identities = 88/122 (72%), Positives = 100/122 (81%)
Query: 275 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINY 334
P +DYIHVRARRGQAT+SHSLAERVRREKISERMK+LQDLVPGC+KVTGKAVMLDEIINY
Sbjct: 253 PKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINY 312
Query: 335 VQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHS---LYPGDCSVQTFPS 391
VQSLQRQVEFLSMKLA+VNP +D N+E +LSKD+FQ G S +P + P
Sbjct: 313 VQSLQRQVEFLSMKLASVNPTLDFNIERILSKDIFQCRGTTASSAFGFFPDIVHPRLHPP 372
Query: 392 RY 393
+Y
Sbjct: 373 KY 374
Score = 45 (20.9 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 142 SNNLPIP-AADPGFAERAARLSCFAGSQM 169
S P P A PGF + A C+ G +
Sbjct: 82 SAGAPPPFVATPGFVDSTAGFPCYNGGNL 110
>TAIR|locus:2201906 [details] [associations]
symbol:AT1G10120 "AT1G10120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC004122 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT012655 EMBL:AK221806 EMBL:AK229309
EMBL:AK230347 EMBL:AF488606 IPI:IPI00541831 PIR:T00632
RefSeq:NP_172483.4 UniGene:At.43391 UniGene:At.69296
ProteinModelPortal:Q6NKN9 SMR:Q6NKN9 EnsemblPlants:AT1G10120.1
GeneID:837549 KEGG:ath:AT1G10120 TAIR:At1g10120 eggNOG:NOG271189
HOGENOM:HOG000090626 InParanoid:Q6NKN9 OMA:GESSHED PhylomeDB:Q6NKN9
ProtClustDB:CLSN2681496 Genevestigator:Q6NKN9 Uniprot:Q6NKN9
Length = 366
Score = 413 (150.4 bits), Expect = 3.6e-42, Sum P(2) = 3.6e-42
Identities = 86/166 (51%), Positives = 116/166 (69%)
Query: 208 QITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDEXXXXXXXXX 267
Q++ V ++P ++ + P+A+ + E+P+ N K+ +
Sbjct: 132 QVSDDAVLGASPVGKRRL--PEAESQWNKKAVEEFQEDPQRGNDQSQKKHKNDQSKETVN 189
Query: 268 XXXXPVE--PPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKA 325
E P ++YIH+RARRGQAT+SHSLAERVRREKISERM+ LQ+LVPGCNK+TGKA
Sbjct: 190 KESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKA 249
Query: 326 VMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQS 371
VMLDEIINYVQSLQ+QVEFLSMKLATVNP ++++++ +L+KDL QS
Sbjct: 250 VMLDEIINYVQSLQQQVEFLSMKLATVNPEINIDIDRILAKDLLQS 295
Score = 50 (22.7 bits), Expect = 3.6e-42, Sum P(2) = 3.6e-42
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 439 EVGPRVPSLWDDDLQSLVQMGFNQNQPRSLNGSMATTQMKIEM 481
+ P + + +LQ+L QMGF N P +++ ++K E+
Sbjct: 325 QYNPLPQTTLESELQNLYQMGFVSN-PSTMSSFSPNGRLKPEL 366
>TAIR|locus:2139484 [details] [associations]
symbol:CIB1 "AT4G34530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161585 EMBL:AL023094
HOGENOM:HOG000238007 EMBL:AF488596 EMBL:AK117846 EMBL:AY120741
EMBL:BT005313 IPI:IPI00519970 PIR:T05273 RefSeq:NP_195179.2
UniGene:At.48937 ProteinModelPortal:Q8GY61 SMR:Q8GY61
DIP:DIP-59356N IntAct:Q8GY61 PRIDE:Q8GY61 EnsemblPlants:AT4G34530.1
GeneID:829604 KEGG:ath:AT4G34530 TAIR:At4g34530 eggNOG:NOG251551
InParanoid:Q8GY61 OMA:SGYSHEM PhylomeDB:Q8GY61
ProtClustDB:CLSN2915063 Genevestigator:Q8GY61 Uniprot:Q8GY61
Length = 335
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 109/261 (41%), Positives = 150/261 (57%)
Query: 202 GSSLSEQITSQTVTDSNPRKRK-SIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDEXX 260
G+ + ++T D N +K+K ++ R E K+ +N + S++ + +
Sbjct: 89 GNFKKRKFDTET-KDCNEKKKKMTMNRDDLVEEGEEEKSKITEQNNGSTKSIKKMKHKAK 147
Query: 261 XXXXXXXXXXXPV--EPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPG 317
V E K DYIHVRARRGQATDSHS+AERVRREKISERMKFLQDLVPG
Sbjct: 148 KEENNFSNDSSKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPG 207
Query: 318 CNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQH 377
C+K+TGKA MLDEIINYVQSLQRQ+EFLSMKLA VNPR D +M+ + +K++ +
Sbjct: 208 CDKITGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNPRPDFDMDDIFAKEVAST----PM 263
Query: 378 SLYPGDCSVQTFPSRYQPQQGSH-LTSSGINNNAENQFSINALNSSLHRNHNIQLPPIN- 435
++ P S + S Y SH + SG ++ N L+ + + N P++
Sbjct: 264 TVVP---SPEMVLSGY-----SHEMVHSGYSSEMVNS---GYLHVNPMQQVNTSSDPLSC 312
Query: 436 -GHGEVGPRVPSLWDDDLQSL 455
+GE PS+WD +Q+L
Sbjct: 313 FNNGEA----PSMWDSHVQNL 329
>UNIPROTKB|Q84LH4 [details] [associations]
symbol:OSJNBb0011H13.2 "Putative Helix-loop-helix
DNA-binding domain containing protein" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 EMBL:AP008209
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140 EMBL:AC120983
EMBL:AC135956 RefSeq:NP_001051150.1 UniGene:Os.24540
EnsemblPlants:LOC_Os03g51910.1 GeneID:4333984 KEGG:osa:4333984
eggNOG:NOG262475 OMA:SKQMMLS ProtClustDB:CLSN2694257 Uniprot:Q84LH4
Length = 327
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 85/157 (54%), Positives = 109/157 (69%)
Query: 218 NPRKRKSIQRPKAKETPPTSDPKVVA---ENPEDSNSMRSKQDEXXXXXXXXXXXXXPVE 274
NP IQ ++T +S + ++ +N + + M+SK+D
Sbjct: 91 NPSASSRIQNVGDQQTEVSSQQERISMEEDNQKSCSKMQSKEDSSDGDGTK--------- 141
Query: 275 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINY 334
+DY+HVRA+RGQAT+SHSLAER+RR+KISERMK LQDLVPGC+K+TGKAVMLDEIINY
Sbjct: 142 --EDYVHVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINY 199
Query: 335 VQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQS 371
VQSLQRQVEFLSMKLATVNP + ++E +LSK + S
Sbjct: 200 VQSLQRQVEFLSMKLATVNPELSFDIEQILSKQMMLS 236
>UNIPROTKB|Q6Z2G7 [details] [associations]
symbol:P0680A05.9 "Putative bHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008208 eggNOG:NOG251551 EMBL:AP005323 EMBL:AK119183
RefSeq:NP_001047868.1 UniGene:Os.7751
EnsemblPlants:LOC_Os02g47660.1 GeneID:4330462 KEGG:osa:4330462
OMA:TVESLCQ ProtClustDB:CLSN2693116 Uniprot:Q6Z2G7
Length = 361
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 116/307 (37%), Positives = 158/307 (51%)
Query: 191 PE-SNNNADSKEGSSLSEQITSQTVTDSNP--RKRKSIQRPKAKETPPTSDPKVVAEN-P 246
PE SN + S G S ++ +SN ++++ Q+ + + P V + P
Sbjct: 67 PEASNGSGSSGGGGSFRKRRPDDAKGESNSICKRQRGKQQQQQQPCHPDQMAAAVGKGRP 126
Query: 247 EDSNSMRSKQDEXXXXXXXXXXXXXPVEPPK--DYIHVRARRGQATDSHSLAERVRREKI 304
E + K+ E V + DYIHVRARRGQATDSHSLAERVRRE+I
Sbjct: 127 ERARPGAKKKAEVASPKDSPATSASTVTAGQKTDYIHVRARRGQATDSHSLAERVRRERI 186
Query: 305 SERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNM-EAL 363
SERM++LQ+LVPGCNKVTGKA MLDEIINYVQSLQ+QVEFLSMK+A NP ++ N+ E L
Sbjct: 187 SERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFLSMKIAASNPVVNFNIVEDL 246
Query: 364 LSKDLFQSCGYVQHSLYPGDC--SVQTFPSRYQ--PQQGSHLTSS----GINNNAENQFS 415
+ L Q+ + P Q PS Q P Q ++ G+ NQ+S
Sbjct: 247 FGRQLSQAA--CNPAALPAMALPMAQVEPSCLQMSPLQQMQTSAGSSGYGLEMVVSNQYS 304
Query: 416 INALNSSLHRNHNIQLPPINGHGEVGPRVPSLWDDDLQSLVQMGFNQNQP-RSLNGSMAT 474
S+ +++ P +N +G G WD L GF+ P +S+
Sbjct: 305 PPGGPMSVPAGASVE-PCLNVNGAAG------WDIGSHGLFS-GFDA--PFQSVQSDCLL 354
Query: 475 TQMKIEM 481
+K+EM
Sbjct: 355 DNLKMEM 361
>UNIPROTKB|Q84T08 [details] [associations]
symbol:OSJNBa0087C10.10 "BHLH transcription factor,
putative, expressed" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC108906 RefSeq:NP_001051605.1
UniGene:Os.33544 STRING:Q84T08 EnsemblPlants:LOC_Os03g58830.1
GeneID:4334471 KEGG:osa:4334471 OMA:GTSTSEW ProtClustDB:CLSN2694415
Uniprot:Q84T08
Length = 265
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 89/155 (57%), Positives = 104/155 (67%)
Query: 248 DSNSMRSKQD-EXXXXXXXXXXXXXPVEPPK-DYIHVRARRGQATDSHSLAERVRREKIS 305
D++S+R++ + + P EPPK DYIHVRARRGQATDSHSLAER RREKIS
Sbjct: 100 DNSSLRTEAETDSRNASKSGDQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKIS 159
Query: 306 ERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLS 365
ERMK LQDLVPGCNKV GKA +LDEIINY+Q+LQRQVEFLSMKL VN ++ +EA
Sbjct: 160 ERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLEAVNAHVNNGIEAFPP 219
Query: 366 KDLFQSCGYVQHSLYPG-DCSVQTFPSRYQPQQGS 399
KD G ++ PG QT P Y QGS
Sbjct: 220 KDF----GAQVYNTAPGLTFDPQT-PREYA--QGS 247
>TAIR|locus:2202867 [details] [associations]
symbol:BPEp "AT1G59640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048446 "petal morphogenesis" evidence=IMP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009753 "response to jasmonic
acid stimulus" evidence=RCA] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0048441 "petal development" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AM269753 EMBL:AM269754
EMBL:AC009317 EMBL:BT003964 EMBL:BT005064 EMBL:AY086373
EMBL:AB028232 IPI:IPI00530097 IPI:IPI00531813 PIR:B96620 PIR:T52428
RefSeq:NP_564749.1 RefSeq:NP_849829.1 UniGene:At.455
ProteinModelPortal:Q0JXE7 SMR:Q0JXE7 IntAct:Q0JXE7 STRING:Q0JXE7
PRIDE:Q0JXE7 EnsemblPlants:AT1G59640.2 GeneID:842254
KEGG:ath:AT1G59640 TAIR:At1g59640 eggNOG:NOG296410
InParanoid:Q0JXE7 OMA:RGASPEW PhylomeDB:Q0JXE7
ProtClustDB:CLSN2688917 Genevestigator:Q0JXE7 GO:GO:0048446
Uniprot:Q0JXE7
Length = 343
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 75/96 (78%), Positives = 83/96 (86%)
Query: 273 VEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEII 332
+EP KDYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNKV GKA++LDEII
Sbjct: 127 MEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 186
Query: 333 NYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
NY+QSLQRQVEFLSMKL VN RM+ +E K++
Sbjct: 187 NYIQSLQRQVEFLSMKLEAVNSRMNPGIEVFPPKEV 222
>UNIPROTKB|Q6ZCV8 [details] [associations]
symbol:P0028A08.20 "Os08g0487700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000145 EMBL:AP004557 RefSeq:NP_001062102.1 UniGene:Os.60678
EnsemblPlants:LOC_Os08g38080.1 GeneID:4345892 KEGG:osa:4345892
eggNOG:NOG275480 Uniprot:Q6ZCV8
Length = 365
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 87/136 (63%), Positives = 104/136 (76%)
Query: 274 EPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEII 332
E K+ Y HVRAR+GQAT++HSLAER+RREKISERMK LQDLVPGC+KVTGKA+MLDEII
Sbjct: 167 EAQKEGYSHVRARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEII 226
Query: 333 NYVQSLQRQVEFLSMKLATVNPRMDLNMEALL--SKDLFQSCGYVQHSLYPGDCSVQTFP 390
NYVQSLQRQVEFLSMKL+ VNPR+DL++E+L+ SKD+ + G Q S P S F
Sbjct: 227 NYVQSLQRQVEFLSMKLSAVNPRIDLDIESLVNNSKDVLRFPG--QPSSAPMGFS---FS 281
Query: 391 SRYQPQQGSHLTSSGI 406
+ P G L+ GI
Sbjct: 282 TEMMP--GLQLSRPGI 295
>TAIR|locus:2115200 [details] [associations]
symbol:BEE2 "AT4G36540" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
PROSITE:PS00678 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161589 EMBL:Z99708
EMBL:AF488591 EMBL:AF370231 EMBL:AY059122 EMBL:AY054588
EMBL:BT000388 EMBL:AY084997 EMBL:AY138254 IPI:IPI00540245
IPI:IPI00548266 PIR:D85431 RefSeq:NP_195372.1 RefSeq:NP_849508.1
UniGene:At.25403 ProteinModelPortal:Q93VJ4 SMR:Q93VJ4 IntAct:Q93VJ4
PRIDE:Q93VJ4 EnsemblPlants:AT4G36540.1 GeneID:829806
KEGG:ath:AT4G36540 TAIR:At4g36540 eggNOG:NOG240651
InParanoid:Q93VJ4 OMA:ELECHID PhylomeDB:Q93VJ4
ProtClustDB:CLSN2685556 Genevestigator:Q93VJ4 Uniprot:Q93VJ4
Length = 304
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 103/245 (42%), Positives = 141/245 (57%)
Query: 191 PESNNNADSKEGS-SLSEQITSQTVTDSNPRKRKSIQRPKAKE--TPPTSDPKVVAENPE 247
PE + D+ +G S + + V ++ + ++Q + E T K+ AE+ E
Sbjct: 55 PEFGPDYDTTDGCISRTSSFHMEPVKNNGHSRAITLQNKRKPEGKTEKREKKKIKAED-E 113
Query: 248 DSNSMRSKQDEXXXXXXXXXXXXXPVEPPKDYIHVRARRGQATDSHSLAERVRREKISER 307
SM+ K + ++ P DYIHVRARRG+ATD HSLAER RREKIS++
Sbjct: 114 TEPSMKGKSN------MSNTETSSEIQKP-DYIHVRARRGEATDRHSLAERARREKISKK 166
Query: 308 MKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKD 367
MK LQD+VPGCNKVTGKA MLDEIINYVQSLQ+QVEFLSMKL+ +NP ++ +++ L +K
Sbjct: 167 MKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINPELECHIDDLSAKQ 226
Query: 368 LFQSCGYVQHSLYPGDCSVQTFPSRYQ--P--QQGSHLTSSGINNNAENQFSINALNSSL 423
FQ+ Y GD S Q+ + ++ P QQGS L S IN++ SS
Sbjct: 227 -FQA--YFTGPP-EGD-SKQSIMADFRSFPLHQQGS-LDYSVINSDHTTSLGAKDHTSSS 280
Query: 424 HRNHN 428
H+
Sbjct: 281 WETHS 285
>TAIR|locus:2053766 [details] [associations]
symbol:AT2G42300 "AT2G42300" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005956 EMBL:AY065411 EMBL:AY096521 EMBL:AK175584
EMBL:AK176019 EMBL:AK176634 EMBL:AF488583 IPI:IPI00532521
PIR:C84852 RefSeq:NP_850368.1 UniGene:At.28495
ProteinModelPortal:Q8VZ02 SMR:Q8VZ02 EnsemblPlants:AT2G42300.1
GeneID:818831 KEGG:ath:AT2G42300 TAIR:At2g42300 eggNOG:NOG301522
HOGENOM:HOG000037005 InParanoid:Q8VZ02 OMA:PEWGREE PhylomeDB:Q8VZ02
ProtClustDB:CLSN2680198 Genevestigator:Q8VZ02 Uniprot:Q8VZ02
Length = 327
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 90/212 (42%), Positives = 126/212 (59%)
Query: 217 SNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDEXXXXXXXXXXXXXPVEPP 276
SNP ++ R KA+ P +D V EN S S +++ VE
Sbjct: 125 SNPGA--NLDRVKAE--PAETDSMV--ENQNQSYSSGKRKEREKKVKSSTKKNKSSVESD 178
Query: 277 K-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYV 335
K Y+HVRARRGQATD+HSLAER RREKI+ RMK LQ+LVPGC+K+ G A++LDEIIN+V
Sbjct: 179 KLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHV 238
Query: 336 QSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQ- 394
Q+LQRQVE LSM+LA VNPR+D N++++L+ + SL G + +++ Q
Sbjct: 239 QTLQRQVEMLSMRLAAVNPRIDFNLDSILASE--------NGSLMDGSFNAESYHQLQQW 290
Query: 395 PQQGSHLTSSGINNNAENQFSINALNSSLHRN 426
P G H G + +Q + + +++LH N
Sbjct: 291 PFDGYHQPEWGREED-HHQANFSMGSATLHPN 321
>TAIR|locus:505006688 [details] [associations]
symbol:AT5G50915 "AT5G50915" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB017063 EMBL:AF428350 EMBL:AY057549 EMBL:AY113059
EMBL:AY087602 IPI:IPI00536793 RefSeq:NP_568745.1 RefSeq:NP_851163.1
UniGene:At.23601 ProteinModelPortal:Q93W88 SMR:Q93W88
EnsemblPlants:AT5G50915.1 EnsemblPlants:AT5G50915.2 GeneID:835164
KEGG:ath:AT5G50915 TAIR:At5g50915 eggNOG:NOG262059
HOGENOM:HOG000242938 InParanoid:Q93W88 OMA:ISERMRT PhylomeDB:Q93W88
ProtClustDB:CLSN2689980 Genevestigator:Q93W88 Uniprot:Q93W88
Length = 286
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 86/161 (53%), Positives = 104/161 (64%)
Query: 196 NADSKEGSSLSEQI--TSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMR 253
N D E S SE++ T++T T + + P A T+ K +SN+
Sbjct: 56 NVDKTENSG-SEKLANTTKTATTGSSSCDQLSHGPSAI----TNTGKTRGRKARNSNN-- 108
Query: 254 SKQDEXXXXXXXXXXXXXPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQD 313
SK+ EPP DYIHVRARRGQATDSHSLAERVRREKISERM+ LQ+
Sbjct: 109 SKEGVEGRKSKKQKRGSKE-EPPTDYIHVRARRGQATDSHSLAERVRREKISERMRTLQN 167
Query: 314 LVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 354
LVPGC+KVTGKA+MLDEIINYVQ+LQ QVEFLSMKL +++P
Sbjct: 168 LVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSISP 208
>UNIPROTKB|Q75M33 [details] [associations]
symbol:P0668H12.5 "BHLH transcription factor" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000142 EMBL:AC084818 EMBL:AC073405 EMBL:HQ858853
EMBL:AK065864 RefSeq:NP_001054390.1 UniGene:Os.23082
EnsemblPlants:LOC_Os05g01256.1 EnsemblPlants:LOC_Os05g01256.2
GeneID:4337537 KEGG:osa:4337537 eggNOG:NOG296531 Uniprot:Q75M33
Length = 339
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 71/83 (85%), Positives = 77/83 (92%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
EPP YIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC+KVTGKA+MLDEII+
Sbjct: 172 EPPAGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIIS 231
Query: 334 YVQSLQRQVEFLSMKLATVNPRM 356
YVQSLQ QVEFLSMKLA+++P M
Sbjct: 232 YVQSLQNQVEFLSMKLASLSPLM 254
>TAIR|locus:2172209 [details] [associations]
symbol:AT5G62610 "AT5G62610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 EMBL:AB020751 HOGENOM:HOG000238007 EMBL:AY072104
EMBL:AY123023 EMBL:AY084578 EMBL:AF488611 IPI:IPI00518025
RefSeq:NP_201067.1 UniGene:At.24534 UniGene:At.24682
ProteinModelPortal:Q9LV17 SMR:Q9LV17 PaxDb:Q9LV17 PRIDE:Q9LV17
EnsemblPlants:AT5G62610.1 GeneID:836382 KEGG:ath:AT5G62610
GeneFarm:2935 TAIR:At5g62610 eggNOG:NOG269855 InParanoid:Q9LV17
OMA:DDSSKMV PhylomeDB:Q9LV17 ProtClustDB:CLSN2916786
Genevestigator:Q9LV17 Uniprot:Q9LV17
Length = 281
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 78/153 (50%), Positives = 95/153 (62%)
Query: 202 GSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSK-QDEXX 260
GS + + S+ DS+ S + KE+ +E+ SMR + +
Sbjct: 74 GSRKTRDLNSED--DSSKMVSSSSSGNELKESGDKKRKLCGSESGNGDGSMRPEGETSSG 131
Query: 261 XXXXXXXXXXXPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNK 320
EPPKDYIHVRARRGQATD HSLAER RREKISE+M LQD++PGCNK
Sbjct: 132 GGGSKATEQKNKPEPPKDYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNK 191
Query: 321 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 353
+ GKA++LDEIINY+QSLQRQVEFLSMKL VN
Sbjct: 192 IIGKALVLDEIINYIQSLQRQVEFLSMKLEVVN 224
>UNIPROTKB|Q8GZV6 [details] [associations]
symbol:OJ1017C11.10 "Putative uncharacterized protein
OJ1017C11.10" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR001810
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50181 PROSITE:PS50888
SMART:SM00256 SMART:SM00353 GO:GO:0005634 SUPFAM:SSF81383
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR019955
PROSITE:PS50053 EMBL:AC135157 ProteinModelPortal:Q8GZV6
Gramene:Q8GZV6 Uniprot:Q8GZV6
Length = 776
Score = 360 (131.8 bits), Expect = 4.5e-32, P = 4.5e-32
Identities = 75/124 (60%), Positives = 96/124 (77%)
Query: 277 KDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQ 336
++Y+HVRA+RGQAT+SHSLAER RREKI+ERMK LQDLVPGCNK+TGKA+MLDEIINYVQ
Sbjct: 623 EEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 682
Query: 337 SLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQ---TFPSRY 393
SLQRQVEFLSMKL+T++P ++ +++ +D+ C S + G CS Q P+ Y
Sbjct: 683 SLQRQVEFLSMKLSTISPELNSDLDL---QDIL--CSQDARSAFLG-CSPQLSNAHPNLY 736
Query: 394 QPQQ 397
+ Q
Sbjct: 737 RAAQ 740
>UNIPROTKB|Q69WS3 [details] [associations]
symbol:OJ1118_E12.15 "Putative bHLH protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003743
ProteinModelPortal:Q69WS3 Gramene:Q69WS3 Uniprot:Q69WS3
Length = 268
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 86/181 (47%), Positives = 105/181 (58%)
Query: 201 EGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQD-EX 259
E LS+ +++ + + P+AK P ++ + ++S+R++ +
Sbjct: 52 EDDDLSKVVSTSAASGGGGGGGQDSDAPEAKRLKPM-------KSSDKNDSLRTEAGTDS 104
Query: 260 XXXXXXXXXXXXPVEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC 318
P EPPK DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGC
Sbjct: 105 GNSSKAADKNATPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 164
Query: 319 NKVTGKAVMLDEIINYVQSLQRQVEF------------LSMKLATVNPRMDLNMEALLSK 366
NKV GKA +LDEIINY+QSLQ QVEF LSMKL VN M + A SK
Sbjct: 165 NKVIGKASVLDEIINYIQSLQHQVEFMFKYLIELFLQFLSMKLEAVNSHMINGIVAFPSK 224
Query: 367 D 367
D
Sbjct: 225 D 225
>TAIR|locus:2032990 [details] [associations]
symbol:CES "AT1G25330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:2000488 "positive regulation of brassinosteroid biosynthetic
process" evidence=IMP] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG264296 EMBL:AC079374 EMBL:DQ446289 EMBL:DQ652859
EMBL:AK175757 EMBL:AY088885 EMBL:AF488607 IPI:IPI00519962
PIR:B86383 PIR:D86381 RefSeq:NP_564229.1 UniGene:At.48236
UniGene:At.63980 ProteinModelPortal:A4D998 SMR:A4D998
EnsemblPlants:AT1G25330.1 GeneID:839117 KEGG:ath:AT1G25330
GeneFarm:2907 TAIR:At1g25330 InParanoid:A4D998 PhylomeDB:A4D998
Genevestigator:A4D998 GO:GO:2000488 Uniprot:A4D998
Length = 223
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 73/134 (54%), Positives = 89/134 (66%)
Query: 245 NPEDSNSMRSKQDEXXXXXXXXXXXXXPVEPPKDYIHVRARRGQATDSHSLAERVRREKI 304
N E+S S R ++ + PKD +HVRA+RGQATDSHSLAERVRREKI
Sbjct: 71 NKEESGSKRRRK----RSEEEEAMNGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKI 126
Query: 305 SERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALL 364
+ER+K LQDLVPGC K G AVMLD II+YV+SLQ Q+EFLSMKL+ + DLN +
Sbjct: 127 NERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFLSMKLSAASACYDLNSLDIE 186
Query: 365 SKDLFQSCGYVQHS 378
D+FQ G + HS
Sbjct: 187 PTDIFQG-GNI-HS 198
>TAIR|locus:2014144 [details] [associations]
symbol:BEE1 "BR enhanced expression 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC013354
EMBL:AY138253 EMBL:AF488579 EMBL:AK117269 EMBL:BT005268
IPI:IPI00539846 RefSeq:NP_173276.2 UniGene:At.46141
ProteinModelPortal:Q8GZ13 SMR:Q8GZ13 IntAct:Q8GZ13
EnsemblPlants:AT1G18400.1 GeneID:838421 KEGG:ath:AT1G18400
TAIR:At1g18400 eggNOG:euNOG17991 HOGENOM:HOG000090950
InParanoid:Q8GZ13 PhylomeDB:Q8GZ13 ProtClustDB:CLSN2680013
Genevestigator:Q8GZ13 Uniprot:Q8GZ13
Length = 260
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 85/214 (39%), Positives = 112/214 (52%)
Query: 149 AADPGFAERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQ 208
AAD F S ++ S ++L ++P+S+NN S SS
Sbjct: 25 AADLNNNNSNLHFQTFHPSSTSLESLFLHHHQQQLLHFPGNSPDSSNNFSST--SSFLH- 81
Query: 209 ITSQTVTDSNPRKRKSIQRPKAKETPPTSD-PKVVAENPEDSNSMRSKQDEXXXXXXXXX 267
+ + D +++ + + ET SD V+A E + R K+ +
Sbjct: 82 -SDHNIVDETKKRKALLPTLSSSETSGVSDNTNVIAT--ETGSLRRGKRLKKKKEEED-- 136
Query: 268 XXXXPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVM 327
E ++ +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G A M
Sbjct: 137 ------EKEREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATM 190
Query: 328 LDEIINYVQSLQRQVEFLSMKLATVNPRMDLNME 361
LDEIINYVQSLQ QVEFLSMKL + D N E
Sbjct: 191 LDEIINYVQSLQNQVEFLSMKLTAASSFYDFNSE 224
>TAIR|locus:2027809 [details] [associations]
symbol:BEE3 "AT1G73830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000090950 ProtClustDB:CLSN2680013 EMBL:AF488585
EMBL:AC012679 EMBL:AK118781 EMBL:BT006055 IPI:IPI00541876
RefSeq:NP_177524.2 UniGene:At.34949 ProteinModelPortal:Q8GWK7
SMR:Q8GWK7 EnsemblPlants:AT1G73830.1 GeneID:843719
KEGG:ath:AT1G73830 TAIR:At1g73830 eggNOG:NOG264296
InParanoid:Q8GWK7 OMA:LENNFHQ PhylomeDB:Q8GWK7
Genevestigator:Q8GWK7 Uniprot:Q8GWK7
Length = 261
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 71/155 (45%), Positives = 91/155 (58%)
Query: 208 QITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDS-NSMRSKQDEXXXXXXXX 266
Q ++ + + +KRKS+ + SD + + + S N S ++
Sbjct: 74 QNNEESSSQFDTKKRKSLMEAVSTSENSVSDQTLSTSSAQVSINGNISTKNNSSRRGKRS 133
Query: 267 XXXXXPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAV 326
E ++ +HVRARRGQATDSHS+AERVRR KI+ER+K LQD+VPGC K G A
Sbjct: 134 KNREE--EKEREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMAT 191
Query: 327 MLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNME 361
MLDEIINYVQSLQ QVEFLSMKL + D N E
Sbjct: 192 MLDEIINYVQSLQNQVEFLSMKLTAASSYYDFNSE 226
>TAIR|locus:2076581 [details] [associations]
symbol:AT3G57800 "AT3G57800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL049660 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000037005 ProtClustDB:CLSN2680198
EMBL:AF488593 EMBL:AL132977 EMBL:AY139773 EMBL:BT003037
EMBL:AY085849 IPI:IPI00532305 IPI:IPI00535946 PIR:T46002
RefSeq:NP_567057.2 RefSeq:NP_850745.1 UniGene:At.34797
ProteinModelPortal:Q3EAI1 EnsemblPlants:AT3G57800.1 GeneID:825530
KEGG:ath:AT3G57800 TAIR:At3g57800 eggNOG:NOG254513
InParanoid:Q3EAI1 OMA:MVASANL PhylomeDB:Q3EAI1
Genevestigator:Q3EAI1 Uniprot:Q3EAI1
Length = 426
Score = 200 (75.5 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 51/124 (41%), Positives = 67/124 (54%)
Query: 209 ITSQTVTDSNPRKRKS-IQRPKAKETPPTSDPKVVA----EN----PEDSNSMRSKQDEX 259
I+ +T T S P + + R K + S ++++ EN P +N ++D
Sbjct: 121 ISGETPTSSVPSNSSANLDRVKTEPAETDSSQRLISDSAIENQIPCPNQNNRNGKRKDFE 180
Query: 260 XXXXXXXXXXXXPVEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC 318
E K Y+HVRARRGQATDSHSLAER RREKI+ RMK LQ+LVPGC
Sbjct: 181 KKGKSSTKKNKSSEENEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGC 240
Query: 319 NKVT 322
+K T
Sbjct: 241 DKGT 244
Score = 158 (60.7 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 29/48 (60%), Positives = 41/48 (85%)
Query: 320 KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKD 367
++ G A++LDEIIN+VQSLQRQVE LSM+LA VNPR+D N++ +L+ +
Sbjct: 289 RIQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDFNLDTILASE 336
Score = 64 (27.6 bits), Expect = 9.7e-11, Sum P(2) = 9.7e-11
Identities = 29/97 (29%), Positives = 43/97 (44%)
Query: 156 ERAARLSCFAGSQMNMN-------SSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQ 208
ERAAR S A Q N N SSV ++ S L ++ E++++ S++ Q
Sbjct: 104 ERAARFSVIATEQQNGNISGETPTSSVPSNSSANLDRVKTEPAETDSSQRLISDSAIENQ 163
Query: 209 ITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAEN 245
I + N KRK ++ K K + T K EN
Sbjct: 164 IPCPNQNNRNG-KRKDFEK-KGKSS--TKKNKSSEEN 196
>UNIPROTKB|Q7Y1H4 [details] [associations]
symbol:OSJNBa0094F01.11 "Putative uncharacterized protein
OSJNBa0094F01.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009567
EMBL:AC093713 EMBL:AK104412 RefSeq:NP_001051563.1 UniGene:Os.27522
EnsemblPlants:LOC_Os03g58330.1 GeneID:4334429 KEGG:osa:4334429
OMA:TDGTERQ ProtClustDB:CLSN2694399 Uniprot:Q7Y1H4
Length = 294
Score = 221 (82.9 bits), Expect = 9.9e-20, Sum P(2) = 9.9e-20
Identities = 46/74 (62%), Positives = 59/74 (79%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
+PP VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK T +A MLDEI++
Sbjct: 125 QPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILD 183
Query: 334 YVQSLQRQVEFLSM 347
YV+ L+ QV+ LSM
Sbjct: 184 YVKFLRLQVKVLSM 197
Score = 40 (19.1 bits), Expect = 9.9e-20, Sum P(2) = 9.9e-20
Identities = 22/98 (22%), Positives = 41/98 (41%)
Query: 148 PAADPGFAERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNA-------DSK 200
P D F + + S F G+ ++ S L + ++ E++ + D++
Sbjct: 11 PPEDDFFDQFFSLTSSFPGAAPGGRAAGDQPFSLALSLDAAAAAEASGSGKRLGVGDDAE 70
Query: 201 EGSSLSEQITSQTVTDSNPRK--RKSIQRPKAKETPPT 236
G S +++ T Q +T P +Q P + TPPT
Sbjct: 71 GGGSKADRETVQ-LTGLFPPVFGGGGVQPPNLRPTPPT 107
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 236 (88.1 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 60/123 (48%), Positives = 74/123 (60%)
Query: 245 NPEDSNSMRSKQDEXXXXXXXXXXXXXPVEPPKDYIHVRARRGQATDSHSLAERVRREKI 304
+P++S E PV K VRARRGQATD HS+AER+RRE+I
Sbjct: 64 HPQESGGPTMGSQEGLQPQGTVSTTSAPVVRQKP--RVRARRGQATDPHSIAERLRRERI 121
Query: 305 SERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMK----LATVNPRMD-LN 359
+ERMK LQ+LVP NK T KA MLDEII YV+ LQ QV+ LSM +V PR++ L+
Sbjct: 122 AERMKSLQELVPNTNK-TDKASMLDEIIEYVRFLQLQVKVLSMSRLGGAGSVGPRLNGLS 180
Query: 360 MEA 362
EA
Sbjct: 181 AEA 183
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 235 (87.8 bits), Expect = 3.6e-19, P = 3.6e-19
Identities = 54/102 (52%), Positives = 64/102 (62%)
Query: 246 PEDSNSMRSKQDEXXXXXXXXXXXXXPVEPPKDYIHVRARRGQATDSHSLAERVRREKIS 305
P+ S Q + P PK VRARRGQATD HS+AER+RRE+I+
Sbjct: 98 PQGSGGQTQTQSQATASATTGGATAQPQTKPK----VRARRGQATDPHSIAERLRRERIA 153
Query: 306 ERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 154 ERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQLQVKVLSM 194
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 231 (86.4 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 49/73 (67%), Positives = 59/73 (80%)
Query: 275 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINY 334
PP+ +RARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+Y
Sbjct: 131 PPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDY 189
Query: 335 VQSLQRQVEFLSM 347
V+ LQ QV+ LSM
Sbjct: 190 VKFLQLQVKVLSM 202
>UNIPROTKB|Q6Z7E7 [details] [associations]
symbol:P0020C11.18 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:CM000139
EMBL:AP004865 EMBL:AK241924 EnsemblPlants:LOC_Os02g35660.1
OMA:TTAMQYL Uniprot:Q6Z7E7
Length = 524
Score = 226 (84.6 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 49/66 (74%), Positives = 56/66 (84%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RREKIS+RMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 314 VRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNK-TNKASMLDEIIDYVKFLQLQ 372
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 373 VKVLSM 378
Score = 48 (22.0 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 22/53 (41%), Positives = 26/53 (49%)
Query: 53 LSSIVSSPAAS-NAPTTCSVIIPADG-GGDNVMIRELIGRLGSICNSGEVLPQ 103
LSS++S P AS NA T S PA+ GG N G N EVLP+
Sbjct: 255 LSSLISGPLASFNA--TQSHRQPAEACGGKN-------GGAAPFVNLSEVLPK 298
>TAIR|locus:2007534 [details] [associations]
symbol:AT1G03040 "AT1G03040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF251692
EMBL:AC006550 EMBL:AY054469 EMBL:AY114633 IPI:IPI00529284
PIR:B86161 RefSeq:NP_001184895.1 RefSeq:NP_563672.1
UniGene:At.20497 ProteinModelPortal:Q93Y00 SMR:Q93Y00 IntAct:Q93Y00
PaxDb:Q93Y00 PRIDE:Q93Y00 EnsemblPlants:AT1G03040.1 GeneID:839446
KEGG:ath:AT1G03040 TAIR:At1g03040 eggNOG:NOG281566
HOGENOM:HOG000239571 InParanoid:Q93Y00 OMA:SIVKPEM PhylomeDB:Q93Y00
ProtClustDB:CLSN2687635 Genevestigator:Q93Y00 Uniprot:Q93Y00
Length = 302
Score = 206 (77.6 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 42/66 (63%), Positives = 56/66 (84%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 202
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 203 VKVLSM 208
Score = 49 (22.3 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 141 SSNNLPIPA-ADPG----FAERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPESNN 195
++NN+P + +DP F E+ LS F+GS + S + + + S E N+
Sbjct: 3 NNNNIPHDSISDPSPTDDFFEQILGLSNFSGSSGSGLSGIGGVGPPPMMLQLGSGNEGNH 62
Query: 196 N 196
N
Sbjct: 63 N 63
>TAIR|locus:2132303 [details] [associations]
symbol:UNE12 "AT4G02590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0031347 "regulation of defense response"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0007275 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000239571
ProtClustDB:CLSN2687635 EMBL:AC002330 EMBL:AL161494 GO:GO:0031347
GO:GO:0009567 EMBL:AF488592 EMBL:AF367328 EMBL:AY143951
EMBL:AY088218 IPI:IPI00545077 IPI:IPI00892352 PIR:T01090
RefSeq:NP_001031577.1 RefSeq:NP_001118919.1 RefSeq:NP_567245.1
UniGene:At.20028 ProteinModelPortal:O22768 SMR:O22768 IntAct:O22768
PaxDb:O22768 PRIDE:O22768 EnsemblPlants:AT4G02590.1
EnsemblPlants:AT4G02590.2 GeneID:828126 KEGG:ath:AT4G02590
TAIR:At4g02590 eggNOG:euNOG02041 InParanoid:O22768 OMA:PAWEKWS
PhylomeDB:O22768 Genevestigator:O22768 Uniprot:O22768
Length = 310
Score = 210 (79.0 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 44/76 (57%), Positives = 59/76 (77%)
Query: 272 PVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEI 331
P +P VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+DEI
Sbjct: 136 PHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEI 194
Query: 332 INYVQSLQRQVEFLSM 347
++YV+ L+ QV+ LSM
Sbjct: 195 VDYVKFLRLQVKVLSM 210
Score = 37 (18.1 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 11/39 (28%), Positives = 16/39 (41%)
Query: 201 EGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDP 239
EG S + S V D+ K + + + PP S P
Sbjct: 98 EGGHGSGKRFSDDVVDNRCSSMKPVFHGQPMQQPPPSAP 136
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 214 (80.4 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 48/65 (73%), Positives = 53/65 (81%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RARRGQATD HS+AER+RREKISERMK LQ LVP NK KA MLDEII+YV+ LQ QV
Sbjct: 240 RARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKAD-KASMLDEIIDYVKFLQLQV 298
Query: 343 EFLSM 347
+ LSM
Sbjct: 299 KVLSM 303
>UNIPROTKB|Q69WX7 [details] [associations]
symbol:P0417G12.19 "Basic helix-loop-helix protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 GO:GO:0005634 Gene3D:4.10.280.10
EMBL:AP003626 EMBL:AP003711 EMBL:AK070970
EnsemblPlants:LOC_Os06g41060.1 OMA:KNGMDLE Uniprot:Q69WX7
Length = 154
Score = 195 (73.7 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 43/85 (50%), Positives = 58/85 (68%)
Query: 308 MKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKD 367
M+ L++LVPGC+KV+G A++LDEIIN+VQSLQRQVE+LSM+LA VNPR+D L
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGG---LDNF 57
Query: 368 LFQSCGYVQHSLYPGDCSVQ--TFP 390
L CG + Y ++ T+P
Sbjct: 58 LTTECGRITGLNYKNGMDLEQVTWP 82
>UNIPROTKB|Q6EPZ6 [details] [associations]
symbol:P0014G10.34 "BHLH transcription factor PTF1-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 HOGENOM:HOG000239571 EMBL:AP005784
RefSeq:NP_001175840.1 UniGene:Os.59658
EnsemblPlants:LOC_Os09g25040.1 GeneID:9272478 KEGG:osa:9272478
OMA:SMSVLTA Uniprot:Q6EPZ6
Length = 499
Score = 216 (81.1 bits), Expect = 9.2e-15, P = 9.2e-15
Identities = 47/71 (66%), Positives = 57/71 (80%)
Query: 275 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKV--TGKAVMLDEII 332
PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK+ T KA MLDEII
Sbjct: 245 PPRQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEII 302
Query: 333 NYVQSLQRQVE 343
+YV+ LQ QV+
Sbjct: 303 DYVKFLQLQVK 313
>UNIPROTKB|Q6Z1F9 [details] [associations]
symbol:OSJNBa0033D24.39 "BHLH transcription factor-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 GO:GO:0005634
EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005439
EMBL:AP004464 RefSeq:NP_001062365.1 UniGene:Os.89290 GeneID:4346166
KEGG:osa:4346166 Uniprot:Q6Z1F9
Length = 143
Score = 185 (70.2 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 35/47 (74%), Positives = 44/47 (93%)
Query: 308 MKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 354
M+ LQ LVPGC+KVTGKA++LDEIINYVQSLQ QVEFLSM++A+++P
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSP 47
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 203 (76.5 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 84/293 (28%), Positives = 132/293 (45%)
Query: 184 RVSRSSTPESNNNADSKEG-SSLSEQITSQTVTDSNP--RKRKSI-QRPKAKETPPTSDP 239
+VS S+TP + A S+ G + ++ S V RK K++ A E TS
Sbjct: 177 QVSPSATPSA---AASESGLTRRTDGTDSSAVAGGGAYNRKGKAVAMTAPAIEITGTSS- 232
Query: 240 KVVAEN---PEDSNSMRSKQDEXXXXXXXXXXXXXPVEPPKDYIHVRARRGQATDSHSLA 296
VV+++ PE +N K+ E +R +A + H+L+
Sbjct: 233 SVVSKSEIEPEKTNVDDRKRKEREATTTDETESRSEETKQARVSTTSTKRSRAAEVHNLS 292
Query: 297 ERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM 356
ER RR++I+ERMK LQ+L+P CNK + KA MLDE I Y++SLQ Q++ +SM + P M
Sbjct: 293 ERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQMMSMGCGMM-PMM 350
Query: 357 DLNMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQG----SHLTSSGINNNAEN 412
M+ + + G + P S FP+ Q+ +H+ SG
Sbjct: 351 YPGMQQYMPH---MAMGMGMNQPIPPP-SFMPFPNMLAAQRPLPTQTHMAGSG------P 400
Query: 413 QFSINALNSSLHRNHNIQLPPINGHGEVGPRVPSLWDDDLQSLVQMGFNQNQP 465
Q+ ++A + S N Q P +G P+ P+ + D Q G + QP
Sbjct: 401 QYPVHASDPSRVFVPNQQYDPTSGQ----PQYPAGYTDPYQQF--RGLHPTQP 447
>UNIPROTKB|Q8S490 [details] [associations]
symbol:rau1 "Transcription factor RAU1" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF465824
ProteinModelPortal:Q8S490 Gramene:Q8S490 Genevestigator:Q8S490
Uniprot:Q8S490
Length = 150
Score = 165 (63.1 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 34/65 (52%), Positives = 49/65 (75%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISER++ LQ+LVP +K T A MLD ++Y++ LQ+Q
Sbjct: 69 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 128
Query: 342 VEFLS 346
V+ L+
Sbjct: 129 VKGLN 133
>UNIPROTKB|Q6K8Y4 [details] [associations]
symbol:OJ1695_H09.18 "Basic helix-loop-helix (BHLH)-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000239571 EMBL:AP003975 EMBL:AP004094
EnsemblPlants:LOC_Os02g55250.1 OMA:GQDDFFD Uniprot:Q6K8Y4
Length = 463
Score = 148 (57.2 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 33/49 (67%), Positives = 40/49 (81%)
Query: 299 VRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 251 LRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSM 298
Score = 79 (32.9 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 17/25 (68%), Positives = 19/25 (76%)
Query: 275 PPKDYIHVRARRGQATDSHSLAERV 299
PP+ RARRGQATD HS+AERV
Sbjct: 207 PPRQ--RQRARRGQATDPHSIAERV 229
>TAIR|locus:2141573 [details] [associations]
symbol:FBH2 "AT4G09180" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL161514 HOGENOM:HOG000095218 ProtClustDB:CLSN2679906
EMBL:AF488613 EMBL:BT010423 EMBL:AK230384 IPI:IPI00545642
PIR:B85093 RefSeq:NP_192657.1 UniGene:At.33710
ProteinModelPortal:Q9M0R0 SMR:Q9M0R0 PaxDb:Q9M0R0 PRIDE:Q9M0R0
EnsemblPlants:AT4G09180.1 GeneID:826499 KEGG:ath:AT4G09180
TAIR:At4g09180 eggNOG:NOG277140 InParanoid:Q9M0R0 OMA:MENLMED
PhylomeDB:Q9M0R0 Genevestigator:Q9M0R0 Uniprot:Q9M0R0
Length = 262
Score = 173 (66.0 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 44/116 (37%), Positives = 67/116 (57%)
Query: 245 NPEDSNSMRSKQDEXXXXXXXXXXXXXPVEP-PKDYI--HVRARRGQATDSHSLAERVRR 301
+PE ++ M+ +Q +E +D + VRA+RG AT S+AERVRR
Sbjct: 144 SPEFTSQMKGEQSSGQVPTGVSSMSDMNMENLMEDSVAFRVRAKRGCATHPRSIAERVRR 203
Query: 302 EKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS--MKLATVNPR 355
+IS+R++ LQ+LVP +K T A ML+E + YV+ LQRQ++ L+ K T P+
Sbjct: 204 TRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQELTEEQKRCTCIPK 259
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 177 (67.4 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 48/133 (36%), Positives = 75/133 (56%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R +A + H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 157
Query: 344 FLSMKLAT-VNPR-MDLNMEALLSKDLFQSCGYVQHSL-YPGDCSVQTFPSRYQPQQGSH 400
LSM+ +NP + +E + +F + G ++ +PG P Q G+H
Sbjct: 158 MLSMRNGVYLNPSYLSGALEPAQASQMFAALGGNNVTVVHPGT----VMPPVNQ-SSGAH 212
Query: 401 LTSSGINNNAENQ 413
+N+ +NQ
Sbjct: 213 HLFDPLNSPPQNQ 225
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 164 (62.8 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 33/63 (52%), Positives = 50/63 (79%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K T KA +LDE I+Y++SLQ Q++
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQV 312
Query: 345 LSM 347
+ M
Sbjct: 313 MWM 315
Score = 59 (25.8 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 22/94 (23%), Positives = 43/94 (45%)
Query: 167 SQMNMNSSVSASDSKKL--RVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKS 224
SQ +++ S+S SK + +++ +++ S ++ G + E + + +T RKRK
Sbjct: 171 SQNDLDVSMSHDRSKNIEEKLNPNASSSSGGSSGCSFGKDIKEMASGRCITTD--RKRKR 228
Query: 225 IQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDE 258
I E+ SD N ++ RS+ E
Sbjct: 229 INH--TDESVSLSDAIGNKSNQRSGSNRRSRAAE 260
Score = 43 (20.2 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 210 TSQTVTD-SNPRKRKSIQRPKAKETPP 235
TS+TV S+P + + +PKA PP
Sbjct: 104 TSETVKPKSSPEPPQVMVKPKACPDPP 130
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 156 (60.0 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 50/152 (32%), Positives = 76/152 (50%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
RR ++ + H+ +ER RR++I+E++K LQ+L+P C K T K MLDE I+Y++SLQ Q++
Sbjct: 10 RRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQM 68
Query: 345 LSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSS 404
L M M ++ +L Q Y+ P PS +P Q +H T
Sbjct: 69 LVM---------GKGMAPVVPPELQQYMHYITAD--PSQIP-PIRPSEPRPFQITHATQQ 116
Query: 405 GINNNAENQFSINALNSSLHRNH---NIQLPP 433
+N E+ F N LH + N PP
Sbjct: 117 R-QSNVESDFLSQMQN--LHPSEPPQNFLRPP 145
>TAIR|locus:2199221 [details] [associations]
symbol:RSL4 "AT1G27740" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0048766 "root hair
initiation" evidence=IMP] [GO:0048765 "root hair cell
differentiation" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009733
GO:GO:0003677 GO:GO:0016049 GO:GO:0003700 GO:GO:0006351
EMBL:AC012375 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY085436
IPI:IPI00523669 PIR:B86402 RefSeq:NP_564293.1 UniGene:At.41015
ProteinModelPortal:Q8LEG1 SMR:Q8LEG1 EnsemblPlants:AT1G27740.1
GeneID:839667 KEGG:ath:AT1G27740 TAIR:At1g27740 eggNOG:NOG244031
HOGENOM:HOG000240244 InParanoid:Q8LEG1 OMA:DESNTNW PhylomeDB:Q8LEG1
ProtClustDB:CLSN2688032 Genevestigator:Q8LEG1 GO:GO:0048766
Uniprot:Q8LEG1
Length = 258
Score = 149 (57.5 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 34/64 (53%), Positives = 45/64 (70%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RA +G ATD SL R RREKI+ER+K LQ+LVP KV + ML+E ++YV+ LQ Q+
Sbjct: 168 RATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQI 226
Query: 343 EFLS 346
+ LS
Sbjct: 227 KLLS 230
Score = 57 (25.1 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 20/75 (26%), Positives = 31/75 (41%)
Query: 163 CFAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKR 222
C S ++ A KK RVS S +N + +G SLS + + ++ K
Sbjct: 107 CKTNSNCDVTRQELAKSKKKQRVSSESNTVDESNTNWVDGQSLSNSSDDEKASVTSV-KG 165
Query: 223 KSIQRPKAKETPPTS 237
K+ + K T P S
Sbjct: 166 KT-RATKGTATDPQS 179
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 180 (68.4 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 57/172 (33%), Positives = 89/172 (51%)
Query: 178 SDSKKLRVS-RSSTPESNNNADS-KEGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPP 235
S+ K L S S+TP+ N A E S +Q + + V S+ S+ P E+P
Sbjct: 242 SEDKVLNESVASATPKDNQKACLISEDSCRKDQESEKAVVCSSVGSGNSLDGPS--ESPS 299
Query: 236 TSDPKVVAENPEDSNSMRSKQDEXXXXXXXXXXXXXPVEPPKDYIHVRARRGQATDSHSL 295
S K N +D + +E P + + ++R ++ + H+L
Sbjct: 300 LS-LKRKHSNIQDIDCHSEDVEEESGDGRKEAG------PSRTGLG--SKRSRSAEVHNL 350
Query: 296 AERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
+ER RR++I+E+M+ LQ+L+P CNKV KA MLDE I Y++SLQ QV+ +SM
Sbjct: 351 SERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKSLQLQVQIMSM 401
Score = 37 (18.1 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 2 EKEDLLMNEGVNSTPP 17
+ ED ++NE V S P
Sbjct: 241 DSEDKVLNESVASATP 256
>TAIR|locus:2008693 [details] [associations]
symbol:FBH1 "AT1G35460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488612 EMBL:AC023064 EMBL:AF411791 EMBL:AY093794
IPI:IPI00538359 PIR:F86475 RefSeq:NP_174776.1 UniGene:At.18017
ProteinModelPortal:Q9C8P8 SMR:Q9C8P8 PRIDE:Q9C8P8
EnsemblPlants:AT1G35460.1 GeneID:840438 KEGG:ath:AT1G35460
TAIR:At1g35460 eggNOG:NOG263612 HOGENOM:HOG000095218
InParanoid:Q9C8P8 OMA:NLCLTEL PhylomeDB:Q9C8P8
ProtClustDB:CLSN2679906 Genevestigator:Q9C8P8 Uniprot:Q9C8P8
Length = 259
Score = 165 (63.1 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 34/65 (52%), Positives = 49/65 (75%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E + YV++LQ Q
Sbjct: 181 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQ 240
Query: 342 VEFLS 346
++ L+
Sbjct: 241 IQELT 245
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 168 (64.2 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 34/62 (54%), Positives = 48/62 (77%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV-E 343
+R +A + H+LAER RREKI+ERMK LQ L+P CNK T K ML+++I YV+SL+ Q+ +
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKST-KVSMLEDVIEYVKSLEMQINQ 205
Query: 344 FL 345
F+
Sbjct: 206 FM 207
>TAIR|locus:4010713915 [details] [associations]
symbol:AT4G28811 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
HOGENOM:HOG000240264 EMBL:AJ519811 IPI:IPI00518617 PIR:H85335
PIR:T04518 RefSeq:NP_001078462.1 UniGene:At.46149
ProteinModelPortal:Q8GT73 SMR:Q8GT73 PRIDE:Q8GT73
EnsemblPlants:AT4G28811.1 GeneID:5008170 KEGG:ath:AT4G28811
TAIR:At4g28811 eggNOG:NOG314238 PhylomeDB:Q8GT73
ProtClustDB:CLSN2699107 Genevestigator:Q8GT73 Uniprot:Q8GT73
Length = 544
Score = 179 (68.1 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 36/72 (50%), Positives = 52/72 (72%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+R +A D H+L+ER RRE+I+ERMK LQ+L+P C K T K ML+++I YV+SLQ Q++
Sbjct: 354 KRSRAADMHNLSERRRRERINERMKTLQELLPRCRK-TDKVSMLEDVIEYVKSLQLQIQM 412
Query: 345 LSMKLATVNPRM 356
+SM + P M
Sbjct: 413 MSMGHGMMPPMM 424
Score = 37 (18.1 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 12/62 (19%), Positives = 28/62 (45%)
Query: 200 KEGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPK---VVAE--NPEDSNSMRS 254
+ G ++ + + + N + + +Q +ET T D K +AE E+++ S
Sbjct: 293 RRGKEVATETAGTSYSGVNKAETERVQIQPERETKITEDKKREETIAEIQGTEEAHGSTS 352
Query: 255 KQ 256
++
Sbjct: 353 RK 354
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 165 (63.1 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 36/86 (41%), Positives = 55/86 (63%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
E P R +R +A + H+L+E+ RR +I+E+MK LQ L+P +K T KA MLD+ I
Sbjct: 18 EQPTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIE 76
Query: 334 YVQSLQRQVEFLSMKLATVNPRMDLN 359
Y++ LQ QV+ LSM+ P ++L+
Sbjct: 77 YLKQLQLQVQMLSMRNGLYLPPVNLS 102
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 152 (58.6 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 42/103 (40%), Positives = 57/103 (55%)
Query: 293 HSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS------ 346
H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ L+
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 156
Query: 347 ---MKLATVNPRMDLNMEALLSKDL-FQSCGYVQHSLYPGDCS 385
M+L V P + L +DL ++ HSL P S
Sbjct: 157 LNPMRLPQVPPPTHTRINETLEQDLNLETLLAAPHSLEPAKTS 199
>TAIR|locus:2059979 [details] [associations]
symbol:FBH4 "AT2G42280" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0046685
"response to arsenic-containing substance" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC002561 GO:GO:0048573
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG312535
HOGENOM:HOG000242890 EMBL:BT015339 EMBL:BT015712 EMBL:AK228981
IPI:IPI00530686 IPI:IPI00538142 PIR:T00937 RefSeq:NP_181757.2
RefSeq:NP_973670.1 UniGene:At.12448 UniGene:At.43726
ProteinModelPortal:Q66GR3 SMR:Q66GR3 PRIDE:Q66GR3
EnsemblPlants:AT2G42280.1 GeneID:818829 KEGG:ath:AT2G42280
TAIR:At2g42280 InParanoid:Q66GR3 OMA:NDNRANC PhylomeDB:Q66GR3
ProtClustDB:CLSN2681218 Genevestigator:Q66GR3 Uniprot:Q66GR3
Length = 359
Score = 167 (63.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 34/65 (52%), Positives = 48/65 (73%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T + MLD ++Y++ LQRQ
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338
Query: 342 VEFLS 346
+ L+
Sbjct: 339 YKILN 343
>TAIR|locus:2026037 [details] [associations]
symbol:FBH3 "AT1G51140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048573 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC079828 EMBL:AY034941 EMBL:AY063120
IPI:IPI00519239 PIR:H96548 RefSeq:NP_564583.1 UniGene:At.19155
ProteinModelPortal:Q9C690 SMR:Q9C690 PaxDb:Q9C690 PRIDE:Q9C690
EnsemblPlants:AT1G51140.1 GeneID:841537 KEGG:ath:AT1G51140
TAIR:At1g51140 eggNOG:NOG312535 HOGENOM:HOG000242890
InParanoid:Q9C690 OMA:TKDEDSA PhylomeDB:Q9C690
ProtClustDB:CLSN2917227 Genevestigator:Q9C690 Uniprot:Q9C690
Length = 379
Score = 167 (63.8 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 36/64 (56%), Positives = 45/64 (70%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR KISERM+ LQDLVP + T A MLD + Y++ LQ Q
Sbjct: 304 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 363
Query: 342 VEFL 345
V+ L
Sbjct: 364 VKAL 367
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 168 (64.2 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 53/170 (31%), Positives = 83/170 (48%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
RR +A + H+L+ER RR++I+ERMK LQ+L+P C++ T KA +LDE I+Y++SLQ Q++
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSR-TDKASILDEAIDYLKSLQMQLQV 311
Query: 345 LSMKLATVNPRMDLNMEALLSKDLF---QSCGYVQHSLYPGDCSVQTFP--SRYQPQQGS 399
+ M M A S +F QS Y+ + FP +R PQ
Sbjct: 312 MWM-----GSGMAAAAAAAASPMMFPGVQSSPYINQMAMQSQMQLSQFPVMNRSAPQNHP 366
Query: 400 HLTSSG---INNNAENQFSINALNSSLHRNHNIQLPPINGHGEVGPRVPS 446
L + A+NQ L + + Q+PP + + P+
Sbjct: 367 GLVCQNPVQLQLQAQNQILSEQL--ARYMGGIPQMPPAGNQMQTVQQQPA 414
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 167 (63.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 34/73 (46%), Positives = 50/73 (68%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R +A H L+ER RR+KI+E MK LQ+L+P C K T ++ MLD++I YV+SLQ Q++
Sbjct: 273 SKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTK-TDRSSMLDDVIEYVKSLQSQIQ 331
Query: 344 FLSMKLATVNPRM 356
SM + P M
Sbjct: 332 MFSMGHVMIPPMM 344
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 169 (64.5 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 33/72 (45%), Positives = 51/72 (70%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 309 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 367
Query: 345 LSMKLATVNPRM 356
+SM P M
Sbjct: 368 MSMGTGLCIPPM 379
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 166 (63.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 36/72 (50%), Positives = 52/72 (72%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK T KA +LDE I Y++SLQ QV+
Sbjct: 225 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 283
Query: 345 LSMKLATVNPRM 356
+ M V P M
Sbjct: 284 MWMTTGIV-PMM 294
>TAIR|locus:2041369 [details] [associations]
symbol:PIL1 "phytochrome interacting factor 3-like 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0010017 "red or far-red light
signaling pathway" evidence=IEP;IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC004411 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0010017 GO:GO:0009641 HOGENOM:HOG000115543
ProtClustDB:CLSN2680935 EMBL:AB090873 EMBL:AY219127 EMBL:AY954840
IPI:IPI00545843 PIR:T02190 RefSeq:NP_182220.2 UniGene:At.36425
ProteinModelPortal:Q8L5W8 SMR:Q8L5W8 IntAct:Q8L5W8 STRING:Q8L5W8
PRIDE:Q8L5W8 EnsemblPlants:AT2G46970.1 GeneID:819311
KEGG:ath:AT2G46970 TAIR:At2g46970 eggNOG:NOG291407
InParanoid:Q8L5W8 OMA:MELVCEN PhylomeDB:Q8L5W8
Genevestigator:Q8L5W8 Uniprot:Q8L5W8
Length = 416
Score = 160 (61.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 54/199 (27%), Positives = 89/199 (44%)
Query: 171 MNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPKA 230
MN++ S K+ R+ + +SN +S +S + + P +S ++
Sbjct: 104 MNNNKKKLKSSKIEFERNVS-KSNKCVESSTLIDVSAKGPKNVEVTTAPPDEQSAAVGRS 162
Query: 231 KETPPTSDPKVVAENPEDSN--SMRSKQD--EXXXXXXXXXXXXXPVEPPKDYIHVRAR- 285
E S K D + S++ K E + K +H R R
Sbjct: 163 TELYFASSSKFSRGTSRDLSCCSLKRKYGDIEEEESTYLSNNSDDESDDAKTQVHARTRK 222
Query: 286 ----RGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
R ++T+ H L ER RR++ +++M+ LQDL+P C K KA +LDE I Y+++LQ Q
Sbjct: 223 PVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYK-DDKASLLDEAIKYMRTLQLQ 281
Query: 342 VEFLSMKLATVNPRMDLNM 360
V+ +SM + P L M
Sbjct: 282 VQMMSMGNGLIRPPTMLPM 300
>TAIR|locus:2117788 [details] [associations]
symbol:AT4G28800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 IPI:IPI00517558
IPI:IPI01020410 PIR:T04519 RefSeq:NP_194609.5 UniGene:At.71648
ProteinModelPortal:Q9SVU7 SMR:Q9SVU7 GeneID:829001
KEGG:ath:AT4G28800 TAIR:At4g28800 InParanoid:Q9SVU7
Genevestigator:Q9SVU7 Uniprot:Q9SVU7
Length = 445
Score = 159 (61.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
+R + + H+LAER RREKI+E+MK LQ L+P CNK T K LD+ I YV+SLQ Q++
Sbjct: 252 KRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKST-KVSTLDDAIEYVKSLQSQIQ 309
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 157 (60.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 32/65 (49%), Positives = 48/65 (73%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R +A + H+L+E+ RR +I+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 193 SKRCRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 251
Query: 344 FLSMK 348
L+M+
Sbjct: 252 MLTMR 256
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 157 (60.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 37/91 (40%), Positives = 55/91 (60%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
V +R +A H+ +ER RR+KI++RMK LQ LVP +K T KA MLDE+I Y++ LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 265
Query: 342 VEFLS-MKLATVNPRMDLNMEALLSKDLFQS 371
V +S M + ++ M + + L L +
Sbjct: 266 VSMMSRMNMPSMMLPMAMQQQQQLQMSLMSN 296
>TAIR|locus:2118934 [details] [associations]
symbol:RSL2 "AT4G33880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0048766 "root hair initiation"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0003677 GO:GO:0016049 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL031032
EMBL:AL161584 HOGENOM:HOG000240244 GO:GO:0048766 EMBL:AF488616
EMBL:BT003137 EMBL:AK228110 IPI:IPI00526320 PIR:T05216
RefSeq:NP_195114.2 UniGene:At.31542 ProteinModelPortal:Q84WK0
SMR:Q84WK0 EnsemblPlants:AT4G33880.1 GeneID:829531
KEGG:ath:AT4G33880 TAIR:At4g33880 eggNOG:NOG318365
InParanoid:Q84WK0 OMA:TINTNSY PhylomeDB:Q84WK0
ProtClustDB:CLSN2680247 Genevestigator:Q84WK0 Uniprot:Q84WK0
Length = 352
Score = 152 (58.6 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 48/180 (26%), Positives = 84/180 (46%)
Query: 167 SQMNMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQ 226
S++++ ++ S + SKK SR+++ + N A + + + +++ ++
Sbjct: 157 SEISVTTTKSLTGSKKR--SRATSTDKNKRARVNKRAQKNVEMSGDNNEGEEEEGETKLK 214
Query: 227 RPKAKETPPTSDPKVVAENPEDSNSMRSKQDEXXXXXXXXXXXXXPVEPPKDYIHVRARR 286
+ K + E+SN D+ P + RA R
Sbjct: 215 KRKNGAMMSRQNSSTTFCTEEESNCA----DQDGGGEDSSSKEDDPSKALNLNGKTRASR 270
Query: 287 GQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 346
G ATD SL R RRE+I+ER++ LQ+LVP KV + ML+E ++YV+ LQ Q++ LS
Sbjct: 271 GAATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQIKLLS 329
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 144 (55.7 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 42/137 (30%), Positives = 68/137 (49%)
Query: 215 TDSNPRKRKSIQRPKAK-----ETPPTSDPKVVAENPEDSNSMRSKQDEXXXXXXXXXXX 269
T+ N R+ + +P+ K E+ ++PK + + +S S DE
Sbjct: 67 TNRNVDSRQDLLKPRKKQKLSSESNLVTEPKTAWRDGQSLSSYNSSDDEKALGLVSNTSK 126
Query: 270 XXPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLD 329
+ +A RG A+D SL R RRE+I++R+K LQ LVP KV + ML+
Sbjct: 127 SLKRK-------AKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVD-ISTMLE 178
Query: 330 EIINYVQSLQRQVEFLS 346
+ ++YV+ LQ Q++ LS
Sbjct: 179 DAVHYVKFLQLQIKLLS 195
>UNIPROTKB|Q2QMV9 [details] [associations]
symbol:LOC_Os12g39850 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
KEGG:dosa:Os12t0589000-00 OMA:DESEMMA Uniprot:Q2QMV9
Length = 304
Score = 149 (57.5 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 51/156 (32%), Positives = 76/156 (48%)
Query: 194 NNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQR--PK-AKETPPTSDPKVVAENPEDSN 250
+ + DS G++ +Q +++ D R K ++ PK AK+ T + P S
Sbjct: 134 HEDLDSVSGTNKRKQ-SAEGEFDGQTRGSKCARKAEPKRAKKAKQTVEKDASVAIPNGSC 192
Query: 251 SMRSKQDEXXXXXXXXXXXXXPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKF 310
S+ S D + RA RG ATD SL R RRE+I+ER+K
Sbjct: 193 SI-SDNDSSSSQEVADAGATSKGKS-------RAGRGAATDPQSLYARKRRERINERLKT 244
Query: 311 LQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 346
LQ+LVP KV + ML+E ++YV+ LQ Q++ LS
Sbjct: 245 LQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQIKLLS 279
>UNIPROTKB|Q67TR8 [details] [associations]
symbol:B1342C04.6 "Basic helix-loop-helix (BHLH)-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP005655 EMBL:AP006057
EMBL:AK060477 EMBL:AK070458 RefSeq:NP_001063357.1 UniGene:Os.51063
EnsemblPlants:LOC_Os09g28210.1 GeneID:4347252 KEGG:osa:4347252
OMA:AYPAFHA ProtClustDB:CLSN2697769 Uniprot:Q67TR8
Length = 236
Score = 143 (55.4 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 43/116 (37%), Positives = 59/116 (50%)
Query: 237 SDPKVVAENPEDSNSMRSKQDEXXXXXXXXXXXXXPVEPPKDYIHVRARRGQ--ATDSHS 294
S P + P+ S+S S E PVE + + RR + D S
Sbjct: 96 SSPGSDSGAPQGSSS--SSSSEAMREMIFHIAALQPVEIDPEAVRPPKRRNVRISKDPQS 153
Query: 295 LAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA 350
+A R+RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L+ QV+ L A
Sbjct: 154 VAARLRRERISERIRILQRLVPGGTKMD-TASMLDEAIHYVKFLKSQVQSLERAAA 208
>UNIPROTKB|Q6Z9R3 [details] [associations]
symbol:P0461F06.33 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000145
eggNOG:NOG315110 EMBL:AP004693 EnsemblPlants:LOC_Os08g36740.1
OMA:SAMREMI Uniprot:Q6Z9R3
Length = 246
Score = 142 (55.0 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 39/81 (48%), Positives = 52/81 (64%)
Query: 273 VEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEII 332
V PPK +VR +TD S+A R+RRE+ISER++ LQ LVPG K+ A MLDE I
Sbjct: 147 VRPPKRR-NVRI----STDPQSVAARMRRERISERIRILQRLVPGGTKMD-TASMLDEAI 200
Query: 333 NYVQSLQRQVEFLSMKLATVN 353
+YV+ L+ QV+ L + A N
Sbjct: 201 HYVKFLKTQVQSLE-RAAAAN 220
Score = 38 (18.4 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 51 AALSSIVSSPAASNAPTTCSVIIPADGGGDN----VMIRELIGRLGSI 94
AA S+ S TT + + GGGD +RE+I + ++
Sbjct: 90 AAYSNAAGGGRGSEYHTTTTTRPASGGGGDGGVGPAAMREMIFHIAAL 137
>UNIPROTKB|Q7XT55 [details] [associations]
symbol:OSJNBa0084K20.3 "OSJNBa0076N16.1 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000141 EMBL:AL606613 EMBL:AL731617 Uniprot:Q7XT55
Length = 218
Score = 141 (54.7 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRA+RG AT S+AER RR +ISE+++ LQ LVP +K T + MLD +++++ LQ Q
Sbjct: 134 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQ 193
Query: 342 VEFL 345
++ L
Sbjct: 194 LQTL 197
>UNIPROTKB|Q5TKP7 [details] [associations]
symbol:OJ1362_G11.11 "Putative uncharacterized protein
OJ1362_G11.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC104713 ProteinModelPortal:Q5TKP7
EnsemblPlants:LOC_Os05g46370.1 KEGG:dosa:Os05t0541400-00
Gramene:Q5TKP7 HOGENOM:HOG000238211 Uniprot:Q5TKP7
Length = 416
Score = 124 (48.7 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 32/77 (41%), Positives = 49/77 (63%)
Query: 272 PVEPPKDYIHVRARRGQ---ATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVML 328
P PP+ R RR ++D ++A R+RRE++SER++ LQ LVPG +K+ A ML
Sbjct: 289 PPPPPQ-----RPRRKNVRISSDPQTVAARLRRERVSERLRVLQRLVPGGSKMD-TATML 342
Query: 329 DEIINYVQSLQRQVEFL 345
DE +Y++ L+ Q+E L
Sbjct: 343 DEAASYLKFLKSQLEAL 359
Score = 68 (29.0 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 28/116 (24%), Positives = 44/116 (37%)
Query: 145 LPIPAADPGFAERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSS 204
LP+PA + L FA + ++V A+ S SS N S E ++
Sbjct: 105 LPVPAIAGATHDDGGLLDRFAFPNVAETTTVQAAASNTAFSGYSSNTTGGGNISSGESNT 164
Query: 205 LSEQI-------TSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMR 253
+E T+ T T P KRK ++ T PT+ +E + S +
Sbjct: 165 YTEVASTPCAVSTTTTTTALPPSKRKLPEKYPVVGTSPTTKTTTTSETAAERRSTK 220
>TAIR|locus:505006103 [details] [associations]
symbol:AT1G05805 "AT1G05805" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC009999 HOGENOM:HOG000242890 EMBL:BT000954 EMBL:AY086106
IPI:IPI00516925 PIR:F86192 RefSeq:NP_563749.1 UniGene:At.11933
ProteinModelPortal:Q8H102 SMR:Q8H102 IntAct:Q8H102 STRING:Q8H102
PaxDb:Q8H102 PRIDE:Q8H102 EnsemblPlants:AT1G05805.1 GeneID:837090
KEGG:ath:AT1G05805 TAIR:At1g05805 eggNOG:NOG249421
InParanoid:Q8H102 OMA:NEVNETP PhylomeDB:Q8H102
ProtClustDB:CLSN2687697 Genevestigator:Q8H102 Uniprot:Q8H102
Length = 362
Score = 145 (56.1 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 32/72 (44%), Positives = 48/72 (66%)
Query: 276 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD +
Sbjct: 275 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQ 334
Query: 334 YVQSLQRQVEFL 345
+++ LQ Q++ L
Sbjct: 335 HIKGLQHQLQNL 346
>TAIR|locus:2074865 [details] [associations]
symbol:HEC2 "AT3G50330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] [GO:0080126 "ovary
septum development" evidence=IGI] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL132976
HOGENOM:HOG000242863 ProtClustDB:CLSN2684406 GO:GO:0048462
GO:GO:0010500 EMBL:BT010607 EMBL:AK175679 EMBL:AK175912
EMBL:AK176020 IPI:IPI00532987 PIR:T45579 RefSeq:NP_190602.1
UniGene:At.35505 ProteinModelPortal:Q9SND4 SMR:Q9SND4 IntAct:Q9SND4
EnsemblPlants:AT3G50330.1 GeneID:824195 KEGG:ath:AT3G50330
TAIR:At3g50330 eggNOG:NOG315110 InParanoid:Q9SND4 OMA:NANMAAM
PhylomeDB:Q9SND4 Genevestigator:Q9SND4 GO:GO:0080126 Uniprot:Q9SND4
Length = 231
Score = 138 (53.6 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 39/81 (48%), Positives = 53/81 (65%)
Query: 273 VEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEII 332
V+PPK +VR + D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I
Sbjct: 115 VKPPKRK-NVRISK----DPQSVAARHRRERISERIRILQRLVPGGTKMD-TASMLDEAI 168
Query: 333 NYVQSLQRQVEFLSMKLATVN 353
+YV+ L++QV+ L + A VN
Sbjct: 169 HYVKFLKKQVQSLE-EHAVVN 188
>UNIPROTKB|Q6AV35 [details] [associations]
symbol:OSJNBa0063J18.7 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140
EMBL:AC107206 RefSeq:NP_001050667.1 UniGene:Os.79759
EnsemblPlants:LOC_Os03g42100.1 GeneID:4333457 KEGG:osa:4333457
eggNOG:NOG300710 OMA:CTSENDS ProtClustDB:CLSN2694086 Uniprot:Q6AV35
Length = 310
Score = 142 (55.0 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 47/157 (29%), Positives = 74/157 (47%)
Query: 192 ESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNS 251
+S+ N G+S +I Q D + RKS ++ +K + E + S +
Sbjct: 134 DSSVNLLDSIGASNKRKIQEQGRLDDQTKSRKSAKKAGSKRGKKAAQ----CEGEDGSIA 189
Query: 252 MRSKQDEX--XXXXXXXXXXXXPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMK 309
+ ++Q PV K ++ ATD SL R RRE+I+ER+K
Sbjct: 190 VTNRQSLSCCTSENDSIGSQESPVAA-KSNGKAQSGHRSATDPQSLYARKRRERINERLK 248
Query: 310 FLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 346
LQ+LVP KV + ML+E ++YV+ LQ Q++ LS
Sbjct: 249 ILQNLVPNGTKVD-ISTMLEEAMHYVKFLQLQIKLLS 284
>UNIPROTKB|Q2QMM0 [details] [associations]
symbol:LOC_Os12g40710 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 Gramene:Q2QMM0 Uniprot:Q2QMM0
Length = 266
Score = 140 (54.3 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
+R A +H+L E+ RR KI+ER + LQ LVPGC+ + +A LD+ I Y++SLQ Q+E
Sbjct: 78 SRHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLE 137
Query: 344 FLS 346
S
Sbjct: 138 ATS 140
>TAIR|locus:2144791 [details] [associations]
symbol:HEC3 "AT5G09750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB020752
EMBL:AL353994 GO:GO:0048462 GO:GO:0010500 IPI:IPI00522404
PIR:T49923 RefSeq:NP_196537.1 UniGene:At.65500
ProteinModelPortal:Q9LXD8 SMR:Q9LXD8 IntAct:Q9LXD8 STRING:Q9LXD8
EnsemblPlants:AT5G09750.1 GeneID:830835 KEGG:ath:AT5G09750
TAIR:At5g09750 eggNOG:NOG238444 HOGENOM:HOG000210013
InParanoid:Q9LXD8 OMA:NDPIGMA ProtClustDB:CLSN2916890
Genevestigator:Q9LXD8 Uniprot:Q9LXD8
Length = 224
Score = 133 (51.9 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 34/74 (45%), Positives = 45/74 (60%)
Query: 291 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA 350
D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L+
Sbjct: 128 DPQSVAARHRRERISERIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLLNNNTG 186
Query: 351 -TVNPRMDLNMEAL 363
T P D +A+
Sbjct: 187 YTPPPPQDQASQAV 200
Score = 38 (18.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 18/95 (18%), Positives = 39/95 (41%)
Query: 151 DP-GFA-ERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQ 208
DP G A ++ +L F + +S+S + +S + + +E ++ E
Sbjct: 39 DPIGMAMDQYTQLHIFNPFSSSHFPPLSSSLTTTTLLSGDQEDDEDEEEPLEELGAMKEM 98
Query: 209 ITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVA 243
+ S ++++PK + + DP+ VA
Sbjct: 99 MYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVA 133
>TAIR|locus:2089418 [details] [associations]
symbol:AT3G21330 "AT3G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP001305 EMBL:AF488617 EMBL:BT004279 EMBL:BT020364
IPI:IPI00541948 RefSeq:NP_188770.1 UniGene:At.38078
ProteinModelPortal:Q8S3D2 SMR:Q8S3D2 EnsemblPlants:AT3G21330.1
GeneID:821687 KEGG:ath:AT3G21330 TAIR:At3g21330 eggNOG:NOG330001
HOGENOM:HOG000095219 InParanoid:Q9LIG3 OMA:LMARELC PhylomeDB:Q8S3D2
ProtClustDB:CLSN2685101 Genevestigator:Q8S3D2 Uniprot:Q8S3D2
Length = 373
Score = 126 (49.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 30/69 (43%), Positives = 45/69 (65%)
Query: 289 ATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMK 348
+TD ++A R RRE+ISE+++ LQ LVPG K+ A MLDE NY++ L+ QV+ L
Sbjct: 276 STDPQTVAARQRRERISEKIRVLQTLVPGGTKMD-TASMLDEAANYLKFLRAQVKALE-- 332
Query: 349 LATVNPRMD 357
+ P++D
Sbjct: 333 --NLRPKLD 339
Score = 57 (25.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 26/93 (27%), Positives = 40/93 (43%)
Query: 161 LSCFAGSQMNMNSSVSASDSKKLRV--SRSSTPESNNNADSKEGSSLSEQITSQTVTDSN 218
L C + N N++ S D + + V S T S S E S + +IT++T T
Sbjct: 88 LDCLLSATSNSNNT-STEDDEGISVLFSDCQTLWSFGGVSSAE--SENREITTETTTTIK 144
Query: 219 PR--KR-KSIQRPKAKETPPTSDPKVVAENPED 248
P+ KR + + T T+ PK + N D
Sbjct: 145 PKPLKRNRGGDGGTTETTTTTTKPKSLKRNRGD 177
Score = 52 (23.4 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 20/79 (25%), Positives = 31/79 (39%)
Query: 168 QMNMNSSVSASDSKKLRVSRSSTPESNNNA-DSKEGSSLSEQITSQTVTDSNPRKRKSIQ 226
Q ++ + S+ D L S+T SNN + + EG S+ + +S
Sbjct: 73 QQHVGNRASSIDPSSLDCLLSATSNSNNTSTEDDEGISVLFSDCQTLWSFGGVSSAESEN 132
Query: 227 RPKAKETPPTSDPKVVAEN 245
R ET T PK + N
Sbjct: 133 REITTETTTTIKPKPLKRN 151
>TAIR|locus:2155543 [details] [associations]
symbol:HEC1 "HECATE 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010500 "transmitting tissue
development" evidence=IGI] [GO:0048462 "carpel formation"
evidence=IMP] [GO:0048445 "carpel morphogenesis" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:AF488618 EMBL:AK228927 IPI:IPI00530790
RefSeq:NP_201507.1 UniGene:At.28829 ProteinModelPortal:Q9FHA7
SMR:Q9FHA7 IntAct:Q9FHA7 EnsemblPlants:AT5G67060.1 GeneID:836841
KEGG:ath:AT5G67060 TAIR:At5g67060 eggNOG:NOG267961
HOGENOM:HOG000242863 InParanoid:Q9FHA7 OMA:FLFNSTH PhylomeDB:Q9FHA7
ProtClustDB:CLSN2684406 Genevestigator:Q9FHA7 GO:GO:0048462
GO:GO:0010500 Uniprot:Q9FHA7
Length = 241
Score = 135 (52.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 36/73 (49%), Positives = 49/73 (67%)
Query: 273 VEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEII 332
V+PPK +VR + D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I
Sbjct: 118 VKPPKRR-NVRISK----DPQSVAARHRRERISERIRILQRLVPGGTKMD-TASMLDEAI 171
Query: 333 NYVQSLQRQVEFL 345
+YV+ L++QV+ L
Sbjct: 172 HYVKFLKKQVQSL 184
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 137 (53.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 49/173 (28%), Positives = 81/173 (46%)
Query: 192 ESNNNADSKEGSS-----LSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENP 246
E+N N S+ GS L+E+ T Q T++N S P + + + +V++
Sbjct: 30 ETNTNPGSESGSGTGFELLAERPTKQMKTNNNMNSTSS--SPSSSSSSGSRTSQVISFGS 87
Query: 247 EDSNSMRSKQDEXXXXXXXXXXXXXPV-EPPKDYIHVRARRG-QATDSHSLAERVRREKI 304
D+ ++ E V KD ++ RR H LAER RR+K+
Sbjct: 88 PDT---KTNPVETSLNFSNQVSMDQKVGSKRKDCVNNGGRREPHLLKEHVLAERKRRQKL 144
Query: 305 SERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMD 357
+ER+ L L+PG K T KA +L++ I +++ LQ +V+ L + V +MD
Sbjct: 145 NERLIALSALLPGLKK-TDKATVLEDAIKHLKQLQERVKKLEEE-RVVTKKMD 195
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 138 (53.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 27/64 (42%), Positives = 47/64 (73%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
RRG+A H+ +ER RR++I++RM+ LQ L+P +K K +LD++I +++ LQ QV+F
Sbjct: 163 RRGRAAAIHNESERRRRDRINQRMRTLQKLLPTASKAD-KVSILDDVIEHLKQLQAQVQF 221
Query: 345 LSMK 348
+S++
Sbjct: 222 MSLR 225
>UNIPROTKB|Q2QMN2 [details] [associations]
symbol:LOC_Os12g40590 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 EMBL:CM000149 eggNOG:NOG272270
KEGG:dosa:Os12t0597800-01 Uniprot:Q2QMN2
Length = 265
Score = 132 (51.5 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 283 RARRGQA-TDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+ARR ++H L E+ RR +I+E+ K LQ LVPGC+K + + LD I+Y++SLQ+Q
Sbjct: 146 KARRNPGYAETHGLTEKRRRSRINEKFKMLQRLVPGCDKCSQSST-LDRTIHYMKSLQQQ 204
Query: 342 VE 343
++
Sbjct: 205 LQ 206
>UNIPROTKB|Q94LR3 [details] [associations]
symbol:OSJNBa0010C11.7 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC069300 RefSeq:NP_001065353.1
UniGene:Os.27587 IntAct:Q94LR3 STRING:Q94LR3 GeneID:4349351
KEGG:osa:4349351 ProtClustDB:CLSN2714538 Uniprot:Q94LR3
Length = 191
Score = 125 (49.1 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 32/80 (40%), Positives = 48/80 (60%)
Query: 300 RREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLN 359
RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ LQ QV+ +S + + P M +
Sbjct: 13 RRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIDYLKQLQAQVQVMSRMGSMMMP-MGMA 70
Query: 360 MEALLSKDLFQSCGYVQHSL 379
M L + Q Q L
Sbjct: 71 MPQLQMSVMAQMAQMAQIGL 90
>UNIPROTKB|Q9ASJ3 [details] [associations]
symbol:P0439B06.24 "Putative uncharacterized protein
P0439B06.24" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP002882 UniGene:Os.30617
ProteinModelPortal:Q9ASJ3 Gramene:Q9ASJ3 OMA:KAITYVK
ProtClustDB:CLSN2918925 Uniprot:Q9ASJ3
Length = 294
Score = 129 (50.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 30/53 (56%), Positives = 38/53 (71%)
Query: 294 SLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 346
S A +VRRE+ISER+K LQDLVP KV ML++ INYV+ LQ QV+ L+
Sbjct: 210 SAAAKVRRERISERLKVLQDLVPNGTKVD-LVTMLEKAINYVKFLQLQVKVLA 261
>TAIR|locus:2098008 [details] [associations]
symbol:PIL2 "phytochrome interacting factor 3-like 2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010017 "red or far-red light signaling
pathway" evidence=IEP] [GO:0010089 "xylem development"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 GO:GO:0010017
EMBL:AL138651 EMBL:AB090874 EMBL:BT033108 IPI:IPI00525935
IPI:IPI00846835 PIR:T48001 RefSeq:NP_001078329.1 RefSeq:NP_191768.2
UniGene:At.1005 UniGene:At.50304 ProteinModelPortal:Q8L5W7
SMR:Q8L5W7 IntAct:Q8L5W7 STRING:Q8L5W7 EnsemblPlants:AT3G62090.2
GeneID:825382 KEGG:ath:AT3G62090 TAIR:At3g62090 eggNOG:NOG305930
HOGENOM:HOG000115543 InParanoid:Q8L5W7 OMA:ETNMLES PhylomeDB:Q8L5W7
ProtClustDB:CLSN2680935 Genevestigator:Q8L5W7 Uniprot:Q8L5W7
Length = 363
Score = 129 (50.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 51/199 (25%), Positives = 90/199 (45%)
Query: 166 GSQMNMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSI 225
G+ N+ + S ++ ESN + D E +L + + + D + RK
Sbjct: 68 GAITNLGDTQVVPQSHVAAAHETNMLESNKHVDDSE--TLKASSSKRMMVDYHNRK---- 121
Query: 226 QRPKAKETPPTSDPKVVAENPE----DSNSMRSKQD-EXXXXXXXXXXXXXPVEPPKDYI 280
K K PP + VVA+ D++S+ +D E P+
Sbjct: 122 ---KIKFIPP-DEQSVVADRSFKLGFDTSSVGFTEDSEGSMYLSSSLDDESDDARPQVPA 177
Query: 281 HVR---ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQS 337
R +R + ++++ ER +R I+++M+ LQ+L+P +K ++ MLDE INY+ +
Sbjct: 178 RTRKALVKRKRNAEAYNSPERNQRNDINKKMRTLQNLLPNSHKDDNES-MLDEAINYMTN 236
Query: 338 LQRQVEFLSMKLATVNPRM 356
LQ QV+ ++M V P M
Sbjct: 237 LQLQVQMMTMGNRFVTPSM 255
>UNIPROTKB|Q8W5G3 [details] [associations]
symbol:OSJNBa0002J24.23 "Helix-loop-helix DNA-binding
domain containing protein, expressed" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000140 HOGENOM:HOG000240244 EMBL:AC090713
EnsemblPlants:LOC_Os03g55550.1 eggNOG:NOG237829 OMA:WIWERRR
Uniprot:Q8W5G3
Length = 310
Score = 119 (46.9 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
V ARR AT + SL R RRE+I+ R++ LQ LVP KV + ML+E ++YV+ LQ Q
Sbjct: 210 VPARRRSATIAQSLYARRRRERINGRLRILQKLVPNGTKVD-ISTMLEEAVHYVKFLQLQ 268
Query: 342 VE 343
++
Sbjct: 269 IK 270
Score = 46 (21.3 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 169 MNMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQ 226
+ +N V +D + V R + P++ + G L Q V+D R ++S+Q
Sbjct: 126 IGLNLLVGDNDGAGV-VLRDAAPQAKRRTQAGHGGDLGRQKKKARVSDK--RNQESMQ 180
Score = 38 (18.4 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 10/34 (29%), Positives = 14/34 (41%)
Query: 181 KKLRVSRSSTPESNNNADSKEGSSLSEQITSQTV 214
KK RVS ES + + S Q+ + V
Sbjct: 166 KKARVSDKRNQESMQSGSCSDNESNCSQVNRRKV 199
>TAIR|locus:2028957 [details] [associations]
symbol:RHD6 "AT1G66470" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0048766 "root
hair initiation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048766 EMBL:AC074025
EMBL:AY128310 EMBL:BT006320 EMBL:AF488615 IPI:IPI00529158
PIR:C96690 RefSeq:NP_176820.1 UniGene:At.35765
ProteinModelPortal:Q9C707 SMR:Q9C707 IntAct:Q9C707
EnsemblPlants:AT1G66470.1 GeneID:842965 KEGG:ath:AT1G66470
TAIR:At1g66470 eggNOG:NOG301765 HOGENOM:HOG000006063
InParanoid:Q9C707 OMA:HESFPPP PhylomeDB:Q9C707
ProtClustDB:CLSN2681768 Genevestigator:Q9C707 Uniprot:Q9C707
Length = 298
Score = 124 (48.7 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 40/138 (28%), Positives = 65/138 (47%)
Query: 215 TDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDEXXXXXXXXXXXXXPVE 274
T+ N + I P++ ETP + +++ + R++ +
Sbjct: 122 TNWNHQHHMDIISPRSTETPQGQKDWLYSDSTVVTTGSRNESLSPKSAGNKRSHTGESTQ 181
Query: 275 PPKDY---IHVRARRGQAT---DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVML 328
P K + + + T D SLA + RRE+ISER+K LQ+LVP KV ML
Sbjct: 182 PSKKLSSGVTGKTKPKPTTSPKDPQSLAAKNRRERISERLKILQELVPNGTKVD-LVTML 240
Query: 329 DEIINYVQSLQRQVEFLS 346
++ I+YV+ LQ QV+ L+
Sbjct: 241 EKAISYVKFLQVQVKVLA 258
>UNIPROTKB|Q2R0R9 [details] [associations]
symbol:LOC_Os11g41640 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240244 KEGG:dosa:Os11t0634700-00 Gramene:Q2R0R9
OMA:SLYAKRR Uniprot:Q2R0R9
Length = 246
Score = 119 (46.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 27/64 (42%), Positives = 41/64 (64%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
R + + D+ SL + RRE+I+ER++ LQ LVP KV + ML+E + YV+ LQ Q+
Sbjct: 156 RGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTKVD-ISTMLEEAVQYVKFLQLQI 214
Query: 343 EFLS 346
+ LS
Sbjct: 215 KLLS 218
Score = 38 (18.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 17/67 (25%), Positives = 29/67 (43%)
Query: 19 WSSCNFSSEKV-ITNCCLNPNWDYSMDQSDPFEAALSSIVSSPAASNAPTTCSVIIPADG 77
WSS + SE+ + + + W S D F + SS+ S S P++ + + D
Sbjct: 9 WSSADARSEESEMIDQLKSMFWS-STDAEINFYSPDSSVNSCVTTSTMPSSLFLPLMDDE 67
Query: 78 GGDNVMI 84
G V +
Sbjct: 68 GFGTVQL 74
>UNIPROTKB|Q6ZFY4 [details] [associations]
symbol:OJ1311_H06.19 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003983
EMBL:AP004161 Uniprot:Q6ZFY4
Length = 298
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 291 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 346
D SLA + RRE+ISER++ LQ+LVP KV ML++ I+YV+ LQ QV+ L+
Sbjct: 206 DPQSLAAKNRRERISERLRILQELVPNGTKVD-LVTMLEKAISYVKFLQLQVKVLA 260
>UNIPROTKB|Q8S0N2 [details] [associations]
symbol:P0692C11.41-1 "BHLH transcription factor-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 EMBL:AP003381 EMBL:AP003273 EMBL:AK106119
RefSeq:NP_001044022.1 UniGene:Os.25546 GeneID:4327679
KEGG:osa:4327679 eggNOG:NOG254276 OMA:EPDMEAM
ProtClustDB:CLSN2919059 Uniprot:Q8S0N2
Length = 393
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 26/57 (45%), Positives = 42/57 (73%)
Query: 289 ATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 345
++D ++A R+RRE++S+R++ LQ LVPG NK+ A MLDE +Y++ L+ QV+ L
Sbjct: 282 SSDPQTVAARLRRERVSDRLRVLQKLVPGGNKMD-TASMLDEAASYLKFLKSQVQKL 337
>TAIR|locus:2156015 [details] [associations]
symbol:RSL1 "AT5G37800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000006063 ProtClustDB:CLSN2681768 EMBL:AB016873
IPI:IPI00523734 RefSeq:NP_198596.1 UniGene:At.55195
ProteinModelPortal:Q9FJ00 SMR:Q9FJ00 EnsemblPlants:AT5G37800.1
GeneID:833758 KEGG:ath:AT5G37800 TAIR:At5g37800 eggNOG:NOG303056
InParanoid:Q9FJ00 OMA:MDFNASS PhylomeDB:Q9FJ00
Genevestigator:Q9FJ00 Uniprot:Q9FJ00
Length = 307
Score = 121 (47.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 29/56 (51%), Positives = 38/56 (67%)
Query: 291 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 346
D SLA + RRE+ISER+K LQ+LVP KV ML++ I YV+ LQ QV+ L+
Sbjct: 210 DPQSLAAKNRRERISERLKVLQELVPNGTKVD-LVTMLEKAIGYVKFLQVQVKVLA 264
Score = 38 (18.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 11/52 (21%), Positives = 22/52 (42%)
Query: 167 SQMNMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSN 218
S N + +S+ + L S++ S N+D + + +T+ D N
Sbjct: 15 STPNSSEDLSSPQNCGLDEGASASSSSTINSDHQNNQGFVFYPSGETIEDHN 66
>UNIPROTKB|Q69TX2 [details] [associations]
symbol:P0021C04.13 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP004687
ProteinModelPortal:Q69TX2 EnsemblPlants:LOC_Os06g10820.1
Gramene:Q69TX2 HOGENOM:HOG000241748 Uniprot:Q69TX2
Length = 211
Score = 115 (45.5 bits), Expect = 0.00023, P = 0.00023
Identities = 30/74 (40%), Positives = 46/74 (62%)
Query: 283 RARRGQA---TDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 339
R RR A ++ S+A R+RRE++S+RM+ LQ LVPG ++ A ML+E I YV+ L+
Sbjct: 112 RPRRRNARVSSEPQSVAARLRRERVSQRMRALQRLVPGGARLD-TASMLEEAIRYVKFLK 170
Query: 340 RQVEFLSMKLATVN 353
V+ L A ++
Sbjct: 171 GHVQSLERAAAALH 184
>UNIPROTKB|Q2QML8 [details] [associations]
symbol:LOC_Os12g40730 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 KEGG:dosa:Os12t0599400-00
KEGG:dosa:Os12t0599550-00 Gramene:Q2QML8 HOGENOM:HOG000244163
Uniprot:Q2QML8
Length = 387
Score = 120 (47.3 bits), Expect = 0.00027, P = 0.00027
Identities = 37/127 (29%), Positives = 61/127 (48%)
Query: 221 KRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDEXXXXXXXXXXXXXPVEPPKDYI 280
++K +++ A +P T+ K E +DS R K+ + Y
Sbjct: 154 EKKQMEKMPAAASPTTTMNK--DETSDDSGE-RKKKKASSAAGKSKQASPRGCRSSQPY- 209
Query: 281 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 340
+ G + D RR KI+ER + LQ LVPGC+K + +A LD+ I Y++SLQ
Sbjct: 210 ---RKSGDSIDELFTKFHRRRFKITERFRTLQRLVPGCDK-SNQASTLDQTIQYMKSLQH 265
Query: 341 QVEFLSM 347
Q++ +S+
Sbjct: 266 QLKAMSV 272
>UNIPROTKB|Q651K2 [details] [associations]
symbol:B1089G05.30 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CM000143 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005967 EnsemblPlants:LOC_Os06g30090.1 Uniprot:Q651K2
Length = 294
Score = 117 (46.2 bits), Expect = 0.00035, P = 0.00035
Identities = 27/74 (36%), Positives = 45/74 (60%)
Query: 272 PVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEI 331
P++ + + + + +R ++ S A + RRE+ISER++ LQ+LVP KV MLD
Sbjct: 179 PLQGSELHEYSKKQRANNKETQSSAAKSRRERISERLRALQELVPSGGKVD-MVTMLDRA 237
Query: 332 INYVQSLQRQVEFL 345
I+YV+ +Q Q+ L
Sbjct: 238 ISYVKFMQMQLRVL 251
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 121 (47.7 bits), Expect = 0.00041, P = 0.00041
Identities = 23/58 (39%), Positives = 41/58 (70%)
Query: 288 QATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 345
+ T +H+L+E+ RREK++ER L+ ++P +K+ K +LD+ I Y+Q LQ++V+ L
Sbjct: 401 EETGNHALSEKKRREKLNERFMTLRSIIPSISKID-KVSILDDTIEYLQDLQKRVQEL 457
>TAIR|locus:2199307 [details] [associations]
symbol:AT1G68240 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009686 "gibberellin biosynthetic process" evidence=RCA]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0016114 "terpenoid biosynthetic process"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC016447
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AJ577585 EMBL:AY735551
EMBL:AY735552 EMBL:AY924719 IPI:IPI00528459 IPI:IPI00657054
IPI:IPI00919318 PIR:H96705 RefSeq:NP_001031251.1 RefSeq:NP_176991.2
UniGene:At.35550 ProteinModelPortal:Q5XVH0 SMR:Q5XVH0
EnsemblPlants:AT1G68240.1 GeneID:843153 KEGG:ath:AT1G68240
TAIR:At1g68240 eggNOG:NOG270610 HOGENOM:HOG000095221 OMA:EGTHEEE
PhylomeDB:Q5XVH0 ProtClustDB:CLSN2681409 Genevestigator:Q5XVH0
Uniprot:Q5XVH0
Length = 185
Score = 110 (43.8 bits), Expect = 0.00051, P = 0.00051
Identities = 26/79 (32%), Positives = 46/79 (58%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPG-CNKVTGKAVMLDEII 332
E P + + A+R ++ + + E+ RR++I +++ LQ L+P C K A L+ II
Sbjct: 53 EEPDEESYRMAKRQRSMEYRMMMEKKRRKEIKDKVDILQGLMPNHCTK-PDLASKLENII 111
Query: 333 NYVQSLQRQVEFLSMKLAT 351
Y++SL+ QV+ +SM T
Sbjct: 112 EYIKSLKYQVDVMSMAYTT 130
>RGD|3092 [details] [associations]
symbol:Mitf "microphthalmia-associated transcription factor"
species:10116 "Rattus norvegicus" [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding transcription
factor activity involved in positive regulation of transcription"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=IEA;ISO] [GO:0003682 "chromatin
binding" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISO] [GO:0006461 "protein complex
assembly" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA;ISO] [GO:0030154 "cell differentiation" evidence=ISO]
[GO:0030316 "osteoclast differentiation" evidence=IEA;ISO]
[GO:0030318 "melanocyte differentiation" evidence=IEA;ISO]
[GO:0042127 "regulation of cell proliferation" evidence=IEA;ISO]
[GO:0042981 "regulation of apoptotic process" evidence=ISO]
[GO:0043010 "camera-type eye development" evidence=IEA;ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA;ISO] [GO:0043234 "protein complex" evidence=IEA;ISO]
[GO:0043473 "pigmentation" evidence=ISO] [GO:0045165 "cell fate
commitment" evidence=IEA;ISO] [GO:0045670 "regulation of osteoclast
differentiation" evidence=IEA;ISO] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0046849 "bone remodeling" evidence=IEA;ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 InterPro:IPR024097 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 RGD:3092 GO:GO:0005634 GO:GO:0043066 GO:GO:0043234
GO:GO:0006461 GO:GO:0016055 GO:GO:0003677 GO:GO:0046849 GO:GO:0003682
GO:GO:0003705 GO:GO:0042127 GO:GO:0001077 GO:GO:0043010 GO:GO:0045670
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014 GO:GO:0030318
GO:GO:0045165 GO:GO:0030316 eggNOG:NOG251286 HOGENOM:HOG000231368
OrthoDB:EOG495ZRR EMBL:AF029886 IPI:IPI00563001 UniGene:Rn.31427
ProteinModelPortal:O88368 STRING:O88368 UCSC:RGD:3092
InParanoid:O88368 ArrayExpress:O88368 Genevestigator:O88368
GermOnline:ENSRNOG00000008658 Uniprot:O88368
Length = 110
Score = 95 (38.5 bits), Expect = 0.00061, P = 0.00061
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 275 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVT---GKAVMLDEI 331
P + A+ Q D+H+L ER RR I++R+K L L+P N K +L
Sbjct: 7 PTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKAS 66
Query: 332 INYVQSLQRQ 341
++Y++ LQR+
Sbjct: 67 VDYIRKLQRE 76
>UNIPROTKB|O88368 [details] [associations]
symbol:Mitf "Microphthalmia-associated transcription
factor" species:10116 "Rattus norvegicus" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
InterPro:IPR024097 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
RGD:3092 GO:GO:0005634 GO:GO:0043066 GO:GO:0043234 GO:GO:0006461
GO:GO:0016055 GO:GO:0003677 GO:GO:0046849 GO:GO:0003682
GO:GO:0003705 GO:GO:0042127 GO:GO:0001077 GO:GO:0043010
GO:GO:0045670 Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
GO:GO:0030318 GO:GO:0045165 GO:GO:0030316 eggNOG:NOG251286
HOGENOM:HOG000231368 OrthoDB:EOG495ZRR EMBL:AF029886
IPI:IPI00563001 UniGene:Rn.31427 ProteinModelPortal:O88368
STRING:O88368 UCSC:RGD:3092 InParanoid:O88368 ArrayExpress:O88368
Genevestigator:O88368 GermOnline:ENSRNOG00000008658 Uniprot:O88368
Length = 110
Score = 95 (38.5 bits), Expect = 0.00061, P = 0.00061
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 275 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVT---GKAVMLDEI 331
P + A+ Q D+H+L ER RR I++R+K L L+P N K +L
Sbjct: 7 PTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKAS 66
Query: 332 INYVQSLQRQ 341
++Y++ LQR+
Sbjct: 67 VDYIRKLQRE 76
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 116 (45.9 bits), Expect = 0.00066, P = 0.00066
Identities = 28/62 (45%), Positives = 37/62 (59%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
+R H LAER RREK+S+R L +VPG K+ KA +L + I YV+ LQ QV+
Sbjct: 173 SRPASQNQEHILAERKRREKLSQRFIALSKIVPGLKKMD-KASVLGDAIKYVKQLQDQVK 231
Query: 344 FL 345
L
Sbjct: 232 GL 233
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 119 (46.9 bits), Expect = 0.00074, P = 0.00074
Identities = 23/56 (41%), Positives = 39/56 (69%)
Query: 290 TDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 345
T +H++ E+ RREK++ER L+ ++P NK+ K +LD+ I Y+Q L+R+V+ L
Sbjct: 439 TGNHAVLEKKRREKLNERFMTLRKIIPSINKID-KVSILDDTIEYLQELERRVQEL 493
>TAIR|locus:2126856 [details] [associations]
symbol:IND "AT4G00120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010197 "polar nucleus fusion" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161471
GO:GO:0010197 EMBL:AF069299 EMBL:BT029443 EMBL:AF488578
IPI:IPI00532644 PIR:T01340 RefSeq:NP_191923.1 UniGene:At.34598
ProteinModelPortal:O81313 SMR:O81313 IntAct:O81313 STRING:O81313
PRIDE:O81313 EnsemblPlants:AT4G00120.1 GeneID:827911
KEGG:ath:AT4G00120 TAIR:At4g00120 eggNOG:NOG274244
HOGENOM:HOG000113070 InParanoid:O81313 OMA:DWNKAND PhylomeDB:O81313
ProtClustDB:CLSN2916160 Genevestigator:O81313 Uniprot:O81313
Length = 198
Score = 109 (43.4 bits), Expect = 0.00094, P = 0.00094
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 291 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 345
D ++ R RRE+ISE+++ L+ +VPG K+ A MLDE I Y + L+RQV L
Sbjct: 121 DPQTVVARRRRERISEKIRILKRIVPGGAKMD-TASMLDEAIRYTKFLKRQVRIL 174
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.126 0.362 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 481 449 0.00092 118 3 11 23 0.47 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 98
No. of states in DFA: 609 (65 KB)
Total size of DFA: 265 KB (2140 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 53.90u 0.11s 54.01t Elapsed: 00:00:03
Total cpu time: 53.91u 0.11s 54.02t Elapsed: 00:00:03
Start: Sat May 11 02:16:21 2013 End: Sat May 11 02:16:24 2013