BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011621
(481 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|147786897|emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 305/587 (51%), Positives = 358/587 (60%), Gaps = 124/587 (21%)
Query: 1 MEKEDLLMNEGVNSTPPTWSSCNFSSE----------KVITNCCLNPNWDYSMDQSDPFE 50
MEKE L MNEG +TPP W NF E + + NC LNPNWD SMDQSDPFE
Sbjct: 1 MEKERLFMNEGNCTTPPNW---NFGMEIQSNELNCSSQAVQNCFLNPNWDNSMDQSDPFE 57
Query: 51 AALSSIVSSPAASNAPTTCSVIIPADGG--GDNVMIRELIGRLGSICNSGEVLPQSYIQA 108
+ALSSIVSSP S+A GG GD++ IRELIGRLGSICNSGE+ PQSYI
Sbjct: 58 SALSSIVSSPVGSSA-----------GGMPGDSIAIRELIGRLGSICNSGEISPQSYIGG 106
Query: 109 QNNNNSNTC----CYSTPLNSPPLPKLNLSM-------IRGSKSSNNLPI-PA-----AD 151
+ N+N CY+TPLNSPP KLNLS+ IR + +N+LP P+ AD
Sbjct: 107 GGHGNTNNSNNTSCYNTPLNSPP--KLNLSIMDHQQHQIRTNFPTNHLPTHPSLAPFPAD 164
Query: 152 PGFAERAARLSCF---------------------------------------AGSQMNMN 172
PGFAERAAR SCF AGSQ+
Sbjct: 165 PGFAERAARFSCFGTGNFSGLSAQFGLNDTELPYRSSTGKLSRVSSNQSFKAAGSQLGAQ 224
Query: 173 S---------SVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVT-----DSN 218
VSASD K ++SRSSTP++ DS+E SS+SEQI + D+N
Sbjct: 225 EFKDRSPPQDGVSASDKKLGKISRSSTPDNAELGDSREESSVSEQIPGGETSLKGQNDAN 284
Query: 219 PRKRKSIQRPKAKETP--PTSDPKVVAENPEDSNSMRSKQDENKS--------------- 261
RKRKSI R KAKE P P++ VA + ++SN+ RSK DE
Sbjct: 285 GRKRKSIPRGKAKEVPSSPSAKDAKVASDKDESNAKRSKPDEGSGSEKDAAKAKAEANGS 344
Query: 262 -------DSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDL 314
+ ++KDN KP E PKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDL
Sbjct: 345 TKSAGDGNQKQSKDNPKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDL 404
Query: 315 VPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGY 374
VPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMD NMEALLSK++FQS G
Sbjct: 405 VPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDFNMEALLSKEIFQSRGS 464
Query: 375 VQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPI 434
+ ++YP D S FP YQPQQG L +GI N E FS+N LNS++ R ++ LP I
Sbjct: 465 LPQAMYPLDSSALAFPYGYQPQQGPSL-QNGIPNGTETPFSVNPLNSAIRRTSSM-LPSI 522
Query: 435 NGHGEVGPRVPSLWDDDLQSLVQMGFNQNQPRSLNGSMATTQMKIEM 481
+G GE +V + W+D+L S+VQMG QNQP+ GSM QMKIE+
Sbjct: 523 DGFGEAASQVSTFWEDELHSVVQMGIGQNQPQGFPGSMGAAQMKIEL 569
>gi|359477937|ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 306/585 (52%), Positives = 358/585 (61%), Gaps = 120/585 (20%)
Query: 1 MEKEDLLMNEGVNSTPPTWS--------SCNFSSEKVITNCCLNPNWDYSMDQSDPFEAA 52
MEKE L MNEG TPP W+ N SS+ V NC LNPNWD SMDQSDPFE+A
Sbjct: 1 MEKERLFMNEGNCITPPNWNLGMEIQSNELNCSSQAV-QNCFLNPNWDNSMDQSDPFESA 59
Query: 53 LSSIVSSPAASNAPTTCSVIIPADGG--GDNVMIRELIGRLGSICNSGEVLPQSYIQAQN 110
LSSIVSSP S+A GG GD++ IRELIGRLGSICNSGE+ PQSYI
Sbjct: 60 LSSIVSSPVGSSA-----------GGMPGDSIAIRELIGRLGSICNSGEISPQSYIGGGG 108
Query: 111 NNNSNTC----CYSTPLNSPPLPKLNLSM-------IRGSKSSNNLPI-PA-----ADPG 153
+ N+N CY+TPLNSPP KLNLS+ IR + +N+LP P+ ADPG
Sbjct: 109 HGNTNNSNNTSCYNTPLNSPP--KLNLSIMDHQQHQIRTNFPTNHLPTHPSLAPFPADPG 166
Query: 154 FAERAARLSCF---------------------------------------AGSQMNMNS- 173
FAERAAR SCF AGSQ+
Sbjct: 167 FAERAARFSCFGTGNFSGLSAQFGLNDTELPYRSSTGKLSRVSSNQSFKAAGSQLGAQEF 226
Query: 174 --------SVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVT-----DSNPR 220
VSASD K ++SRSSTP++ DS+E SS+SEQI + D+N R
Sbjct: 227 KDRSPPQDGVSASDKKLGKISRSSTPDNTELGDSREESSVSEQIPGGETSLKGQNDANGR 286
Query: 221 KRKSIQRPKAKETP--PTSDPKVVAENPEDSNSMRSKQDENKS----------------- 261
KRKSI R KAKE P P++ VA + ++SN+ RSK DE
Sbjct: 287 KRKSIPRGKAKEVPSSPSAKDAKVASDKDESNAKRSKPDEGSGSEKDAAKAKAEANGSTK 346
Query: 262 -----DSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVP 316
+ ++KDN KP E PKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVP
Sbjct: 347 SAGDGNQKQSKDNPKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVP 406
Query: 317 GCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQ 376
GCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMD NMEALLSK++FQS G +
Sbjct: 407 GCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDFNMEALLSKEIFQSRGSLP 466
Query: 377 HSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPING 436
++YP D S FP YQPQQG L +GI N E FS+N LNS++ R ++ LP I+G
Sbjct: 467 QAMYPLDSSALAFPYGYQPQQGPSL-QNGIPNGTETPFSVNPLNSAIRRTSSM-LPSIDG 524
Query: 437 HGEVGPRVPSLWDDDLQSLVQMGFNQNQPRSLNGSMATTQMKIEM 481
GE +V + W+D+L S+VQMG QNQP+ GSM QMKIE+
Sbjct: 525 FGEAASQVSTFWEDELHSVVQMGIGQNQPQGFPGSMGAAQMKIEL 569
>gi|224128880|ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 297/574 (51%), Positives = 367/574 (63%), Gaps = 99/574 (17%)
Query: 1 MEKEDLLMNEGVNSTPPTWSSCNFSSE----------KVITNCCLNPNWDYSMDQSDPFE 50
ME++ L ++EG N+ W+SC+F E + + NC LNPNWD S+DQSDPFE
Sbjct: 1 MERDKLFVSEGANTAATIWNSCSFGMEMQANELSCGPEKLANCFLNPNWDNSLDQSDPFE 60
Query: 51 AALSSIVSSPAASNAPTTCSVIIPADGGGDNVMIRELIGRLGSICNSGEVLPQSYIQAQN 110
+ALSSIVSSP AS A + I A GGD++MIRELIGRLG+ICNSG++ QS++ N
Sbjct: 61 SALSSIVSSPVASGANANANAIPNAGVGGDSLMIRELIGRLGNICNSGDISLQSFVNNNN 120
Query: 111 NNNSNTCCYSTPLNSPPLPKLNLSMIRGSKSSNNLPIPA----ADPG-------FAERAA 159
N+ + + CYSTP+NSP PKLNLSM+ S+ NLPIP PG F ERAA
Sbjct: 121 NSTNTS-CYSTPMNSP--PKLNLSMM-DSQMRGNLPIPGNSVVKHPGLAPFPADFVERAA 176
Query: 160 RLSCFAGS-------QMNMNSS-----------------VSASDSKKLRV---------- 185
R SCF + Q +N S VS+++S K+ V
Sbjct: 177 RYSCFGSNNPGGINKQFGLNESELINRLMPRVEPGKLSRVSSNNSMKVTVSQANVQESNK 236
Query: 186 --------------SRSSTPESNNNADSKEGSSLSEQI-----TSQTVTDSNPRKRKSIQ 226
SR S P ++ N DS+E SSLSEQ+ + ++ D+N RKRKSI
Sbjct: 237 SSPQDGSLNSEKKFSRQSRPTTSENGDSREESSLSEQVPGGKLSMKSQNDANSRKRKSIP 296
Query: 227 RPKAKETPPT----SDPKVVAENPEDSNSMRSKQDE-NKSDSSKTKDN------------ 269
R KAKETP + SD KV AEN ++S + RSK DE N SD K+
Sbjct: 297 RGKAKETPSSSPSASDVKVAAEN-DESKAKRSKSDETNGSDKDTAKEKEEENGNQKQNKN 355
Query: 270 -SKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVML 328
SKP EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVML
Sbjct: 356 NSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVML 415
Query: 329 DEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQT 388
DEIINYVQSLQRQVEFLSMKL++VNPRM++NME LLSKD+FQS G + HSLYP D S
Sbjct: 416 DEIINYVQSLQRQVEFLSMKLSSVNPRMEINMETLLSKDIFQSRGSMPHSLYPLDASTPV 475
Query: 389 FPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPINGHGE-VGPRVPSL 447
FP YQ QQG L +G+ +NAE QFS+N LN++L RN ++ LP ++G G+ + ++
Sbjct: 476 FPYGYQSQQGLALQ-NGMPSNAETQFSMNPLNAALRRNPSMHLPHLDGFGDPAALQASAM 534
Query: 448 WDDDLQSLVQMGFNQNQPRSLNGSMATTQMKIEM 481
W+DDLQS+VQMG+ QN S GS+ +T MKIE+
Sbjct: 535 WEDDLQSVVQMGYGQNHQESFQGSVPSTHMKIEL 568
>gi|255550670|ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor, putative [Ricinus communis]
Length = 534
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 306/542 (56%), Positives = 354/542 (65%), Gaps = 95/542 (17%)
Query: 1 MEKEDLLMNEGVNSTP-PTWSSCNFSSE---------KVITNCCLNPNWDYSMDQSDPFE 50
MEKE L M+EGVNS P W+SCNF E I N N NW+ SMDQSDPFE
Sbjct: 1 MEKEKLFMSEGVNSREVPIWNSCNFGMEISSSNELNSDQIPNSFFNSNWENSMDQSDPFE 60
Query: 51 AALSSIVSSPAASNAPTTCSVIIPADGGGDNVMIRELIGRLGSICNSGEVLPQSYIQAQN 110
+ALSSIVSSP A+ P + GD VMIRELIGRLG+ICNS ++ PQSYI N
Sbjct: 61 SALSSIVSSPNANAVPNS---------NGDPVMIRELIGRLGNICNSRDISPQSYINTNN 111
Query: 111 NNNSNTCCYSTPLNSPPLPKLNLSM----IRGSKSSNN---LPIPA-----ADPGFAERA 158
NN++NT CY+TPLNSPP KLN+S+ IRG+ ++NN LPI + ADPGF ERA
Sbjct: 112 NNSTNTSCYTTPLNSPP--KLNISILDSQIRGNTNTNNSHNLPIASLAPLPADPGFVERA 169
Query: 159 ARLSCFA--------------------------GSQMNMNSSVSA-------SDSKKLRV 185
AR SCF GSQ+N ++ A SD K +
Sbjct: 170 ARFSCFGSSRNLSGLSGQFGSNESSFLSRIPATGSQVNASNVQQAVADGKPNSDRKLNVI 229
Query: 186 SRSSTPESNNNADSKEGSSLSEQITS-------QTVTDSNPRKRKSIQRPKAKETPPTS- 237
SRSSTPE+ DS+E SSLSEQI Q D + RKRK+I R KAKETP +S
Sbjct: 230 SRSSTPENAEFGDSREESSLSEQIPGGELSIKVQNNNDFSVRKRKAIPRGKAKETPSSSP 289
Query: 238 ---DPKVVAENPEDSNSMRSKQDE-NKSDSSKT---------KDNSKPVEPPKDYIHVRA 284
D KV AE E S + RSK DE N D +K KDN+K EPPKDYIHVRA
Sbjct: 290 SASDVKVAAEKDE-STAKRSKSDEANGHDKAKAEQNGNQKQNKDNTKLPEPPKDYIHVRA 348
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF
Sbjct: 349 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 408
Query: 345 LSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQ-TFPSRYQPQQGSHLTS 403
LSMKLATVNPRMD+NMEA LSKD+FQS G + HSLYP D S P YQ QQG L +
Sbjct: 409 LSMKLATVNPRMDVNMEA-LSKDVFQSFGSLPHSLYPLDSSAALALPYSYQSQQGVPLPN 467
Query: 404 SGINNNAENQFSINALNSSLHRNHNIQLPPINGHGEVGPR-VPSLWDDDLQSLVQMGFNQ 462
+++NAE QFS+NAL L RNH++QLPP++G G+ R V + W+++LQS+VQMGF Q
Sbjct: 468 D-MSSNAETQFSMNAL---LRRNHSMQLPPLDGFGDAAARQVSAFWEEELQSVVQMGFVQ 523
Query: 463 NQ 464
NQ
Sbjct: 524 NQ 525
>gi|449459842|ref|XP_004147655.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
gi|449525371|ref|XP_004169691.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
Length = 546
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 265/573 (46%), Positives = 327/573 (57%), Gaps = 128/573 (22%)
Query: 1 MEKEDLLMNEGVNSTPPTWSSCNFSSEKVITN------CCLNPNWDYSMDQSDPFEAALS 54
MEKE MN+G C+F ++ N LNPNW+ SMD SD FE+ LS
Sbjct: 1 MEKE-FFMNDG---------GCSFYGMEIQPNELNSSGGLLNPNWENSMDHSDLFESTLS 50
Query: 55 SIVSSPAASNAPTTCSVIIPADGGGDNVMIRELIGRLGSICNSGEVLPQSYIQAQNNNNS 114
SIVSSPA S+ D N+M+RELIGRLGSICNSGE+ P SYI NNN++
Sbjct: 51 SIVSSPANSHIIGGGGGGGGGD----NLMMRELIGRLGSICNSGEISPHSYIGGTNNNST 106
Query: 115 NTCCYSTPLNSPPLPKLNLSMIRGSKSSNNLPIP--------AADPGFAERAARLSCFAG 166
NT CY+TPLNSP PKLNLS I S+ NL IP + DPGFAERAAR SCF
Sbjct: 107 NTSCYNTPLNSP--PKLNLSSIMESQIRGNL-IPHHQNLAPFSTDPGFAERAARFSCFGN 163
Query: 167 SQM-NMNSSVSASDSKKL-------------RVSRSSTPES------------------- 193
+ +N + ++++++L ++SR S+ +S
Sbjct: 164 RNLGGLNGQLGSNETQELSNRSMAGAGVESGKLSRVSSNKSFNIGGVGSPQMVVQEGDQS 223
Query: 194 -------------------------NNNADSKEGSSLSEQ--ITSQTV---TDSNPRKRK 223
N DS+EGSS+SEQ I + ++N RKRK
Sbjct: 224 PVQKGNSMPIPNKKVSNRFSRSSTPENAGDSREGSSVSEQNPIGESGLKGKAETNTRKRK 283
Query: 224 SIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDE---NKSDSSKTK------------- 267
S+Q +AK D K EN E N + K DE + D +K K
Sbjct: 284 SVQTGQAK------DVKAAVENHE-PNGKKIKPDEVTKKEIDGAKGKAEAKSSGDANQKQ 336
Query: 268 --DNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKA 325
D+SKP EPPKDYIHVRARRGQATDSHSLAERVRREKIS+RMKFLQDLVPGCNKVTGKA
Sbjct: 337 NNDSSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISKRMKFLQDLVPGCNKVTGKA 396
Query: 326 VMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCS 385
VMLDEIINYVQSLQRQVEFLSMKLATVNPRMD NME L+ KD+F+ G H++YP D S
Sbjct: 397 VMLDEIINYVQSLQRQVEFLSMKLATVNPRMDFNMETLVPKDIFKGPGSSSHTVYPMDSS 456
Query: 386 VQTFPSRYQPQQGSHLT--SSGINNNAENQFSINALNSSLHRNHNIQLPPINGHGEV--G 441
V F YQ H+T SGI N E QFS+ + N + RN + Q+ NG+ EV G
Sbjct: 457 VPQFAYDYQSM---HVTPLHSGIPNGTEKQFSVASANDVMQRNLSGQM--TNGYNEVVNG 511
Query: 442 PRVPSLWDDDLQSLVQMGFNQNQPRSLNGSMAT 474
++ W+D+L ++VQMG+ QNQ ++ N M +
Sbjct: 512 IQISKFWEDELHTVVQMGYGQNQLQNANDEMKS 544
>gi|298205236|emb|CBI17295.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 249/487 (51%), Positives = 296/487 (60%), Gaps = 90/487 (18%)
Query: 26 SEKVITNCCLNPNWDYSMDQSDPFEAALSSIVSSPAASNAPTTCSVIIPADGGGDNVMIR 85
S + + NC LNPNWD SMDQSDPFE+ALSSIVSSP S+
Sbjct: 11 SSQAVQNCFLNPNWDNSMDQSDPFESALSSIVSSPVGSSG-------------------- 50
Query: 86 ELIGRLGSICNSGEVLPQSYIQAQNNNNSNTCCYSTPLNSPPLPKLNLSM-------IRG 138
NN++NT CY+TPLNSPP KLNLS+ IR
Sbjct: 51 ---------------------HGNTNNSNNTSCYNTPLNSPP--KLNLSIMDHQQHQIRT 87
Query: 139 SKSSNNLPI-PA-----ADPGFAERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPE 192
+ +N+LP P+ ADPGFAERAAR SCF + S+ + +L RSST
Sbjct: 88 NFPTNHLPTHPSLAPFPADPGFAERAARFSCFGTGNFSGLSAQFGLNDTELPY-RSST-- 144
Query: 193 SNNNADSKEGSSLSEQITSQTVT-----DSNPRKRKSIQRPKAKETP--PTSDPKVVAEN 245
DS+E SS+SEQI + D+N RKRKSI R KAKE P P++ VA +
Sbjct: 145 GWKLGDSREESSVSEQIPGGETSLKGQNDANGRKRKSIPRGKAKEVPSSPSAKDAKVASD 204
Query: 246 PEDSNSMRSKQDENKS----------------------DSSKTKDNSKPVEPPKDYIHVR 283
++SN+ RSK DE + ++KDN KP E PKDYIHVR
Sbjct: 205 KDESNAKRSKPDEGSGSEKDAAKAKAEANGSTKSAGDGNQKQSKDNPKPPEAPKDYIHVR 264
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE
Sbjct: 265 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 324
Query: 344 FLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTS 403
FLSMKLATVNPRMD NMEALLSK++FQS G + ++YP D S FP YQPQQG L
Sbjct: 325 FLSMKLATVNPRMDFNMEALLSKEIFQSRGSLPQAMYPLDSSALAFPYGYQPQQGPSL-Q 383
Query: 404 SGINNNAENQFSINALNSSLHRNHNIQLPPINGHGEVGPRVPSLWDDDLQSLVQMGFNQN 463
+GI N E FS+N LNS++ R ++ LP I+G GE +V + W+D+L S+VQMG QN
Sbjct: 384 NGIPNGTETPFSVNPLNSAIRRTSSM-LPSIDGFGEAASQVSTFWEDELHSVVQMGIGQN 442
Query: 464 QPRSLNG 470
QP+ G
Sbjct: 443 QPQGFPG 449
>gi|255587658|ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
gi|223525454|gb|EEF28039.1| transcription factor, putative [Ricinus communis]
Length = 554
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 228/504 (45%), Positives = 303/504 (60%), Gaps = 87/504 (17%)
Query: 23 NFSSEKVITNCCLNPNWDYSMDQSDPFEAALSSIVSSPAASNAPTTCSVIIPADGGGDNV 82
N SS +++C +PNW+ S DQS F++ALSS+VSSPAASN+ + I
Sbjct: 48 NNSSSNHLSDCFYDPNWEKSTDQSLQFDSALSSMVSSPAASNSNISTESFI--------- 98
Query: 83 MIRELIGRLGSICNSGEVLPQSY------------IQAQNNNNSNTCCYSTPLNSPPLPK 130
IRELIG+LG++ ++GE+ P S I NN++NT CY+TPL+SPP K
Sbjct: 99 -IRELIGKLGNVGSTGEISPHSQPMLAASYNNKNSITGTGNNSTNTSCYTTPLSSPP--K 155
Query: 131 LNLSMIRGSKSSNNLPIP----------AADPGFAERAARLSCFAG-------SQMNMNS 173
LN+S ++ L P ADPGFAERAAR SCF SQ +N
Sbjct: 156 LNMS------PTDQLSTPLALNSSVAEFTADPGFAERAARFSCFGSRSFNGRTSQFGLNK 209
Query: 174 -------------------SVSASDSKKLRVSRSSTPESNN-----NADSKEGSSLSEQI 209
S+ A S + +++S+P + N+ S+E SS+SEQ
Sbjct: 210 LEMQLMGNANKLPRVSSTPSLKAVGSHHQKGNKNSSPLLQDRSELANSTSQEESSVSEQ- 268
Query: 210 TSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSK---------QDENK 260
+ + N +KRK+ + K+KE P + K AE ++SN+ RSK ++E+K
Sbjct: 269 -NPPNAELNSKKRKTAPKAKSKEAPQPNSAKD-AEVDDNSNAKRSKGNEKNDVKAEEEHK 326
Query: 261 S--DSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC 318
D + K ++KP EPPKDYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGC
Sbjct: 327 GNGDDKQNKASTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGC 386
Query: 319 NKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHS 378
NKVTGKA+MLDEIINYVQSLQRQVEFLSMKLA+VN R+D+N++ L+SKD+FQ+ + H
Sbjct: 387 NKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDINLDTLMSKDIFQTTNQLPHP 446
Query: 379 LYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPINGHG 438
++P D S +QPQQ L S I+N A S++ L++ L N N+ LPP+ G
Sbjct: 447 IFPIDSSASAI-FGHQPQQNPAL-HSNISNGALTHCSVDPLDTGLSHNLNMHLPPLEGFN 504
Query: 439 EVGPRVPSLWDDDLQSLVQMGFNQ 462
P+ P+ ++DLQS+VQMGF Q
Sbjct: 505 HTPPQFPTFCEEDLQSIVQMGFTQ 528
>gi|224069890|ref|XP_002303073.1| predicted protein [Populus trichocarpa]
gi|222844799|gb|EEE82346.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 247/555 (44%), Positives = 325/555 (58%), Gaps = 103/555 (18%)
Query: 14 STPPTWSSCNFSSEKVITNC----CLNPNWDYSMDQSDPFEAALSSIVSSPAASNAPTTC 69
S+ P W S + S ++ NC N NW+ S D S FE++LSS+VSSP SN C
Sbjct: 25 SSMPVWQSLS-SPMEMQDNCSARRLFNSNWEKSTDHSPHFESSLSSMVSSPGVSN----C 79
Query: 70 SVIIPADGGGDNVMIRELIGRLGSICNS---GEVLPQS-------YIQAQNNNNSNTCCY 119
+V ++ M+RELIG LG+I NS GE+ P S YI A NN+ +NT CY
Sbjct: 80 NV------SSESFMVRELIGNLGNIDNSNNPGEISPHSQPMLAASYITAANNS-ANTSCY 132
Query: 120 STPLNSPPLPKLNLS-MIRGSKSSNNLPIPA-------------ADPGFAERAARLSCFA 165
+TPLNSPP KLN+ M + SK N+P ADPGFAERAA+ SCF
Sbjct: 133 TTPLNSPP--KLNMPVMDQFSKEHLNIPSLGKPMGLNSSVAEFTADPGFAERAAKFSCFG 190
Query: 166 G-------SQMNMNSSVSA-------SDSKKLRVSRS-------------STP-ESNNNA 197
SQ+ +N++ A + K RV+ S STP + +
Sbjct: 191 SRSFNGRISQLGLNNAEMANGCNPLMGNGKLARVASSPLLKAVGSQKGNKSTPLQDRSEL 250
Query: 198 DSKEGSSLSEQITS-----QTVTDSNPRKRKSIQRPKAKET---PPTSDPKVVAENPEDS 249
+ + SS+SEQI S + + N RKRK++ + KAK++ PP S K AE ++S
Sbjct: 251 TNSQESSVSEQIPSGEAGLKASNELNSRKRKALSKGKAKQSASNPPASATKD-AETDDNS 309
Query: 250 NSMRSKQDENK----------------SDSSKTKDNSKPVEPPKDYIHVRARRGQATDSH 293
N+ R K +E + D + K NS+P EPPKDYIHVRARRGQATDSH
Sbjct: 310 NTKRIKPNEGEENENSPVKAEEEPKGSGDDIQNKANSRPPEPPKDYIHVRARRGQATDSH 369
Query: 294 SLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 353
SLAERVRREKISERMK LQDLVPGCNKVTGKA+MLDEIINYVQSLQRQVEFLSMKLA+VN
Sbjct: 370 SLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVN 429
Query: 354 PRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQ 413
R+D NM+ L+SKD+FQS + H ++P D S +Q QQ L S+ I+N A
Sbjct: 430 TRLDFNMDTLISKDIFQSSQPLPHPIFPLDSSAPAAIFSHQQQQNPPLHSN-ISNGAVTH 488
Query: 414 FSINALNSS-LHRNHNIQLPPINGHGEVGPRVPSLWDDDLQSLVQMGFNQNQ------PR 466
S++ L+++ L + N QLPP++G + + P+ +DDLQ++VQMG+ QN P+
Sbjct: 489 CSVDPLDTTGLCQTLNAQLPPLDGFTQNAHQYPTFCEDDLQTIVQMGYGQNPNLETFLPQ 548
Query: 467 SLNGSMATTQMKIEM 481
+ +GS + MKIE+
Sbjct: 549 NFHGSNQVSHMKIEL 563
>gi|356558973|ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 548
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 239/543 (44%), Positives = 316/543 (58%), Gaps = 104/543 (19%)
Query: 32 NCCLNPNWD-----YSMDQSDPFEAALSSIVSSPAASNAPTTCSVIIPADGGGDNVMIRE 86
+C NPNWD + + D +ALSS+VSSPAAS+ P S +N +IRE
Sbjct: 17 DCFYNPNWDKSTADHGLHHFD--SSALSSMVSSPAASSNPNNKS--------NENFIIRE 66
Query: 87 LIGRLGSICNSGE---------VLPQSYIQAQNNNNSNTCCYSTPLNSPP-------LPK 130
L+G+LG I +S E V+ S + + NN++ T CYSTPL+SPP L
Sbjct: 67 LVGKLGPIGSSDEIPQHSPHPLVVASSCMNSNGNNSTYTSCYSTPLSSPPKVNIVHSLVN 126
Query: 131 LNLSMIRGSKSS----NNLPIPAADPGFAERAARLSCFAGS-------QMNMNSS----- 174
L+ + G KS+ +++ +ADPGFAERAA+ SCF Q+ +N++
Sbjct: 127 ERLANLGGGKSTMALNSSVAEFSADPGFAERAAKFSCFGSRSFNDRSVQLGVNNAELAQR 186
Query: 175 -------------VSASDSKKLRVSRSSTPESNNN-----------ADSKEGSSLSEQ-- 208
VS+S K S+ E+ N+ A+S+E S++SEQ
Sbjct: 187 SAPAMEHGGKLPRVSSSPLLKTLGSQMGAQENKNSAIHQEQEKMEGANSQEESTISEQAP 246
Query: 209 ---ITSQTVTD-SNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSS 264
I +T D N RKRK+ + KAKET + +P E EDSNS RSK +E + +
Sbjct: 247 NGEIGVKTSQDMMNSRKRKASSKGKAKETSNSFNPTKGVEGSEDSNSKRSKPNEGDGNEN 306
Query: 265 ---------------KTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMK 309
+ K NSKP EPPKDYIHVRARRGQATDSHSLAERVRREKISERMK
Sbjct: 307 GQVKVEEESKAEEEKQNKSNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMK 366
Query: 310 FLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLF 369
LQDLVPGCNKVTGKA+MLDEIINYVQSLQRQVEFLSMKLA+VN RMDL++E L+SKD+F
Sbjct: 367 LLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRMDLSIENLISKDVF 426
Query: 370 Q---SCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRN 426
Q S + ++++P D S QTF +QPQQ + + + I N + S++ L++SL +N
Sbjct: 427 QSNNSLATLPNAVFPLDSSAQTFYG-HQPQQNNPVAHNNIPNRSVTHCSVDPLDTSLCQN 485
Query: 427 HNIQLPPINGHGEVGPRVP-SLWDDDLQSLVQMGFNQNQPR-------SLNGSMATTQMK 478
+QLPP+N + G + P + +DDL ++VQMGF Q R S NGS QMK
Sbjct: 486 LAMQLPPLNVFNDGGSQFPLAFLEDDLHTIVQMGFGQAANRKTPIQSPSFNGSNNVPQMK 545
Query: 479 IEM 481
+E+
Sbjct: 546 VEL 548
>gi|356503048|ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 582
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 235/547 (42%), Positives = 312/547 (57%), Gaps = 94/547 (17%)
Query: 17 PTWSSCNFSSEKVITNCCLNPNWDYSM--DQS-DPFEAALSSIVSS-PAASNAPTTCSVI 72
PT +C +SE+ +C N NWD S DQ F+++ S + S PAAS+ P
Sbjct: 48 PTVMNC--ASEQTQQDCFYNSNWDKSTTTDQGLHHFDSSALSSMVSSPAASSNPNNNMSN 105
Query: 73 IPADGGGDNVMIRELIGRLGSICNSGE---------VLPQSYIQAQNNNNSNTCCYSTPL 123
+N +IREL+G+LG+I NS E V+ SY+ + NN++NT CYSTPL
Sbjct: 106 -------ENFIIRELMGKLGAIGNSDEIPQHSPHPLVVASSYMNTKGNNSTNTSCYSTPL 158
Query: 124 NSPPLPKLNLSMIRGSKSSNNLPIPAADPGFAERAARLSCFAGSQMNMNS---------- 173
+SPP + S+ + ++++ +ADPGFAERAA+ SCF N S
Sbjct: 159 SSPPKVNIVNSLSTTTVLNSSVAEFSADPGFAERAAKFSCFGSRSFNDRSVQLRVNNAEL 218
Query: 174 ---------------SVSASDSKKLRVSRSSTPESNNN-----------ADSKEGSSLSE 207
VS+S K S+ E+ N+ A+S+E S++SE
Sbjct: 219 AQRSAPAMEHGGKLPRVSSSPLLKTLGSQMGAQENKNSAIHQEQEKMEGANSQEESTISE 278
Query: 208 QI--------TSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDEN 259
Q TSQ + +S RKRK+ + KAKET T++P E E SNS RSK +E
Sbjct: 279 QTPNGEIGVKTSQDIMNS--RKRKASSKGKAKETSNTTNPTKGVEGSEYSNSKRSKPNEG 336
Query: 260 KSDS-------------SKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISE 306
+ ++K NSKP EPPKDYIHVRARRGQATDSHSLAERVRREKISE
Sbjct: 337 NENGQVKVEEESKAEEEKQSKSNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISE 396
Query: 307 RMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSK 366
RMK LQDLVPGCNKVTGKA+MLDEIINYVQSLQRQVEFLSMKLA+VN RMDL++E+L++K
Sbjct: 397 RMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRMDLSIESLVTK 456
Query: 367 DLFQS----CGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSS 422
D+FQS + ++P S Q F +QPQQ + + + I N S++ L++S
Sbjct: 457 DVFQSNNSLATHPNAIIFPLGSSAQAFYG-HQPQQNNPVFHNNIPNRTVTHCSVDPLDTS 515
Query: 423 LHRNHNIQLPPINGHGEVGPRVP-SLWDDDLQSLVQMGFNQN-------QPRSLNGSMAT 474
L +N +QL P++ E G + P + +DDL ++VQMGF Q Q S NGS
Sbjct: 516 LCQNLAMQLSPLDVFNEGGSQFPLAFLEDDLHTIVQMGFGQAANRKTPIQSSSFNGSNNV 575
Query: 475 TQMKIEM 481
QMK+E+
Sbjct: 576 PQMKVEL 582
>gi|356527316|ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 586
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 229/538 (42%), Positives = 301/538 (55%), Gaps = 112/538 (20%)
Query: 32 NCCLN--PNWDYSMDQSD-PFEAALSSIVSSPAASNAPTTCSVIIPADGGGDNVMIRELI 88
+C N P WD S D F++ALSS+VSSPAASN+ + +N +IRELI
Sbjct: 58 DCFYNNTPTWDKSTDHHGLQFDSALSSMVSSPAASNSNMSS----------ENFVIRELI 107
Query: 89 GRLGSI---CNSGEVLPQS--------YIQAQNNNNSNTCCYSTPLNSPP---------- 127
G+LG+I + E+ P S YI NN+ + T CYSTPL+S P
Sbjct: 108 GKLGNIGAGSDEIEISPHSQPLVGASSYINCNNNSTN-TSCYSTPLSSSPKVNMNKIPTM 166
Query: 128 ---LPKLNLSMIRGSKSSNNLPIP--AADPGFAERAARLSCFAGSQMNMNSS-------- 174
L K + + G+ +S N + +ADPGFAERAA+LSCF N ++
Sbjct: 167 VKHLVKEGMPLSLGTSTSLNSTVAEFSADPGFAERAAKLSCFGSRSFNGRTTQLCLNIAE 226
Query: 175 ------------------VSASDSKKLRVSRSSTPESNNN--------ADSKEGSSLSEQ 208
VS+S S K+ S+ T E+ N+ A+S+E S++SEQ
Sbjct: 227 LAQRSSPLVENGKKQLPRVSSSPSLKVLGSQMGTQENKNSPLQDLMEVANSQEESAISEQ 286
Query: 209 ITSQTVTDS-----NPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDE----- 258
+ + N RKRK + KAKET +++P + AE +DSN+ RSK +E
Sbjct: 287 TPNGDTGEKPSPYVNSRKRKGPSKGKAKETSTSTNPPMAAEASDDSNAKRSKPNEGEGNE 346
Query: 259 ----------------NKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRRE 302
N +D + K NSKP EPPKDYIHVRARRGQATDSHSLAERVRRE
Sbjct: 347 NGQVKAEEESKGGNNSNANDEKQNKSNSKPPEPPKDYIHVRARRGQATDSHSLAERVRRE 406
Query: 303 KISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEA 362
KISERMK LQDLVPGCNKVTGKA+MLDEIINYVQSLQRQVEFLSMKLA+VN R+D ++E+
Sbjct: 407 KISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDFSIES 466
Query: 363 LLSKDLFQSCGYVQHSLYPGDCSVQTF-PSRYQPQQGSHLTSSGINNNAENQFSINALNS 421
L+SKD+FQS + ++P D S F + QP H + I N S++ L++
Sbjct: 467 LISKDIFQSNNSLAQPIFPIDSSAPPFYGQQTQPNPAIH---NNIPNGTMTHNSVDPLDT 523
Query: 422 SLHRNHNIQLPPINGHGEVGPRVP-SLWDDDLQSLVQMGFNQN-------QPRSLNGS 471
+ +N + LP +NG E G + P + +DDL ++VQMGF Q Q +S NGS
Sbjct: 524 GMCQNLGMHLPHLNGFNEGGFQYPITFSEDDLHTIVQMGFGQTANRKTPIQSQSFNGS 581
>gi|224065260|ref|XP_002301743.1| predicted protein [Populus trichocarpa]
gi|222843469|gb|EEE81016.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 150/225 (66%), Positives = 179/225 (79%), Gaps = 1/225 (0%)
Query: 257 DENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVP 316
+E + + KDNS P EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVP
Sbjct: 2 EEENGNHKQKKDNSNPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVP 61
Query: 317 GCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQ 376
GCNKVTGKAVMLDEIINYVQSLQRQVEFLSMK+ATVNP+M++NME LSKD+FQS G +
Sbjct: 62 GCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKMATVNPKMEINMETFLSKDIFQSRGSMP 121
Query: 377 HSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPING 436
H LYP D S FP YQ QQG L G++ NAE+QFS+N LN++L R+ ++QLP ++G
Sbjct: 122 HGLYPLDSSTPAFPYGYQSQQGLAL-QDGMSRNAESQFSMNPLNAALRRSSSMQLPALDG 180
Query: 437 HGEVGPRVPSLWDDDLQSLVQMGFNQNQPRSLNGSMATTQMKIEM 481
G+ + ++W DDLQS+VQMG+ QNQ + GS+ TQMKIE+
Sbjct: 181 FGDASHQASAMWQDDLQSVVQMGYGQNQQQDFQGSVPPTQMKIEL 225
>gi|356566230|ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 585
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 237/565 (41%), Positives = 310/565 (54%), Gaps = 122/565 (21%)
Query: 16 PPTWSSCNFSSEKV---ITNC-------CL---NPNWDYSMDQSDPFEAALSSIVSSPAA 62
PP+W S S+ V + NC C P WD S D F++ALSS+VSSPAA
Sbjct: 29 PPSWQSSLSSAMDVQVTVLNCSTEQTQDCFYNTTPTWDKSTDHGLQFDSALSSMVSSPAA 88
Query: 63 SNAPTTCSVIIPADGGGDNVMIRELIGRLGSICN---SGEVLPQS-------YIQAQNNN 112
SN+ + +N +IRELIG+LG+I S E+ P S + NNN
Sbjct: 89 SNSNISS----------ENFVIRELIGKLGNIGGGGGSDEISPHSQPLVGASFYINCNNN 138
Query: 113 NSNTCCYSTPLNSPP------LPKLNLSMIR-GSKSSNNLPIP--------AADPGFAER 157
++NT CYSTPL+SPP +P + +++ G S P+ +ADPGFAER
Sbjct: 139 STNTSCYSTPLSSPPKVNTIKIPTMVNHLVKEGMPPSLETPMSLNSTVAKFSADPGFAER 198
Query: 158 AARLSCFAG-------SQMNMNSS-----------------VSASDSKKLRVSRSSTPES 193
AA+ SCF +Q+ +N++ VS+S S K+ S+ T E+
Sbjct: 199 AAKFSCFGSRSLNGRTTQLGLNNAELAQRSSLVENGKRLPRVSSSPSLKVLESQMGTQEN 258
Query: 194 NNN--------ADSKEGSSLSEQI-TSQTVTDSNP----RKRKSIQRPKAKET-----PP 235
N+ A+S+E S++SEQ T +P RKRK + KAKET PP
Sbjct: 259 KNSPLQDLMELANSQEESTISEQTPNGDTGVKPSPYVNSRKRKGPSKGKAKETSASINPP 318
Query: 236 TSDPKVVAENPEDSNSMRSK--------------------QDENKSDSSKTKDNSKPVEP 275
AE ED N+ RSK + N +D + K NSKP EP
Sbjct: 319 MGLSLQAAEASEDWNAKRSKPNAGEGNENGQVKAEEESKGGNSNANDEKQNKSNSKPPEP 378
Query: 276 PKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYV 335
PKDYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCNKVTGKA+MLDEIINYV
Sbjct: 379 PKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYV 438
Query: 336 QSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRY-Q 394
QSLQRQVEFLSMKLA+VN R+D ++E+L+SKD+FQS + H ++ D S F ++ Q
Sbjct: 439 QSLQRQVEFLSMKLASVNTRLDFSIESLISKDIFQSNNSLAHPIFLIDSSAPPFYGQHPQ 498
Query: 395 PQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPINGHGEVGPRVPSLW-DDDLQ 453
P H + I N S++ L++ L +N + LP +N E G + + +DDL
Sbjct: 499 PNPAVH---NNIPNGTMTHNSVDPLDTGLCQNLGMHLPHLNDFNEGGSQYAKPFSEDDLH 555
Query: 454 SLVQMGFNQN-------QPRSLNGS 471
+++QMGF QN Q +S NGS
Sbjct: 556 TIIQMGFGQNANRITPIQSQSFNGS 580
>gi|449527227|ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 450
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 217/501 (43%), Positives = 283/501 (56%), Gaps = 94/501 (18%)
Query: 17 PTWSSCNFSSEKVITNCCLNPNWDYSMDQSDPFEAALSSIVSSPAASNAPTTCSVIIPAD 76
P + C+ SS + +C LNP DQS F++ALSS+VSSPAASN+ T
Sbjct: 8 PDLTHCSSSSHQSPPDCFLNP----VSDQSFQFDSALSSMVSSPAASNSNIT-------- 55
Query: 77 GGGDNVMIRELIGRLGSICNSGEVLPQSYIQAQNNNNSNTCCYSTPLNSPPLPKLNLSMI 136
++ IRELIG+LG N+ S + LP + S+
Sbjct: 56 --NESFAIRELIGKLG-----------------GNSERRILELSNSTAAAALPPSSSSVA 96
Query: 137 RGSKSSNNLPIPAADPGFAERAARLSCFA-----GSQM-----NMNSSVSASDSKKLRVS 186
++DPGFAERAAR SCF G Q+ N S +S + K RVS
Sbjct: 97 EF----------SSDPGFAERAARFSCFGSRSFNGRQLTNEFGNYRSHLSIGNEKLSRVS 146
Query: 187 RSST----------PESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPT 236
S + E NN+ S+E S +++Q T +NPRKRK+I + K KE P
Sbjct: 147 SSPSLKALGSEMNLQEHKNNSSSQEDES---SLSNQDKTITNPRKRKAITKAKLKE--PL 201
Query: 237 SDPKVVAENPEDSNSMRSKQ--------DENKSDSSKTKDNSKPVEPPKDYIHVRARRGQ 288
PK +E EDS ++ DEN ++ +TK NSKP E PKDYIHVRARRGQ
Sbjct: 202 L-PKRKSEEVEDSGKKGKRENGRGFEENDENSAEEKQTKANSKPPEAPKDYIHVRARRGQ 260
Query: 289 ATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMK 348
ATDSHSLAERVRREKISERMK LQDLVPGCNKVTGKA+MLDEIINYVQSLQ QVEFLSMK
Sbjct: 261 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEFLSMK 320
Query: 349 LATVN-PRMDLNMEALL-SKDLFQSCGYVQH-SLYPGDCSVQTFPSRYQPQQGSHLTSSG 405
LA+VN R+D N+++L+ SK ++QS + H + P D S +F Y Q S T+S
Sbjct: 321 LASVNTTRVDFNVDSLISSKQMYQSGTSLTHPQISPIDSSASSF---YGHQNSSLPTTS- 376
Query: 406 INNNAENQFSINALNSSLHRNHNIQLPPINGHGEVGPRVPSLWDDDLQSLVQMGFNQNQP 465
S++ ++S L +N IQLPP+N + + P+ +D+LQS+VQMGF QNQ
Sbjct: 377 -------HCSVDPIDSVLCQNLPIQLPPLNSFLQNPSQYPNFGEDELQSIVQMGFVQNQT 429
Query: 466 RSL-----NGSMATTQMKIEM 481
+ + N ++ + QMKIE+
Sbjct: 430 QEISLQSHNFNLGSDQMKIEL 450
>gi|115441817|ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|56784941|dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113534719|dbj|BAF07102.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|215704868|dbj|BAG94896.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189599|gb|EEC72026.1| hypothetical protein OsI_04910 [Oryza sativa Indica Group]
gi|323388943|gb|ADX60276.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 481
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 210/515 (40%), Positives = 271/515 (52%), Gaps = 116/515 (22%)
Query: 33 CCLNPNWDYSMDQS--DPFEAALSSIVSSPAASNAPTTCSVIIPADGGGDNVMIRELIGR 90
C LN NWD SMD + + ALSS+VSSPA+++ G
Sbjct: 17 CFLNLNWDQSMDAAAGGHLDPALSSMVSSPASNS-----------------------TGA 53
Query: 91 LGSICNSGEVLPQSYIQAQNNNNSNTCCYSTPLNSPPLPKLNLSMI-------------R 137
L I PQ + TPL+SPP KLNLSM+
Sbjct: 54 LHGIS------PQPHYGG-----------GTPLSSPP--KLNLSMMGQFHHYAAPPQVGG 94
Query: 138 GSKSSNNLPIPA------------ADPGFAERAARLSCFAG--------------SQMNM 171
G LPI ADPGFAERAARLS F +Q +
Sbjct: 95 GGGGGGGLPILENLMPMGHLDQFLADPGFAERAARLSGFDARGGGGGGGYGGAGPAQFGL 154
Query: 172 NSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPKAK 231
+ +A SK++ + +T + ++ +D G + +I + +D N RKRK+ + K K
Sbjct: 155 PDAGAAGASKEMELG--NTRDESSVSDPAPGGA---EIPPKGASDGNARKRKASGKGKGK 209
Query: 232 ETP----------------PTSDPKVVAENPEDSNSMRSKQD--ENKSDSSKTKDNS-KP 272
++P T + AE E+S ++ Q EN + KD+S KP
Sbjct: 210 DSPMSTSAAKEDSSGKRCKSTEESNAAAE--ENSGKGKAAQSNSENGGGKKQGKDSSSKP 267
Query: 273 VEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEII 332
EPPKDYIHVRARRG+ATDSHSLAERVRREKIS+RMK LQDLVPGCNKV GKAVMLDEII
Sbjct: 268 PEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEII 327
Query: 333 NYVQSLQRQVEFLSMKLATVNPRMDL-NMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPS 391
NYVQSLQRQVEFLSMKLATVNP++D N+ LL+KD+ QSC +Q S +P + S P
Sbjct: 328 NYVQSLQRQVEFLSMKLATVNPQLDFNNLPNLLAKDMHQSCSPLQSSHFPLETSGAPLPY 387
Query: 392 RYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPINGHGEVGPRVPSLWDDD 451
QPQQG+ L G+ N +NQ S++ L+ + R P +NG + +V + W DD
Sbjct: 388 INQPQQGNPL-GCGLTNGMDNQGSMHPLDPAFCRPMGSHHPFLNGVSDAASQVGAFWQDD 446
Query: 452 LQSLVQMGFNQNQP-----RSLNGSMATTQMKIEM 481
LQS+VQM Q+Q S NGS+ T MK+E+
Sbjct: 447 LQSVVQMDMGQSQEIATSSNSYNGSLQTVHMKMEL 481
>gi|357513299|ref|XP_003626938.1| BHLH transcription factor [Medicago truncatula]
gi|355520960|gb|AET01414.1| BHLH transcription factor [Medicago truncatula]
Length = 498
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 218/522 (41%), Positives = 290/522 (55%), Gaps = 113/522 (21%)
Query: 32 NCCLNPNWDYSMDQSDPFEAALSSIVSSPAASNAPTTCSVIIPADGGGDNVMIRELIGRL 91
+C NPNWD S DQ+ +++ LSSIVSSPAA+++P+ ++ +N ++RELIG+L
Sbjct: 18 DCFFNPNWDKSTDQNLNYDSTLSSIVSSPAATSSPSNPNM------SNENFVMRELIGKL 71
Query: 92 GSICNSGEVLPQSYIQAQNNNNSNTCCYSTPLNSPPLPKLNLSMIRGSKSSNNLPIPAAD 151
G+ GE+ S S PL P + + + + D
Sbjct: 72 GTF---GEISQHS---------------SNPLVLPMMSR--------------VAEFSPD 99
Query: 152 PGFAERAARLSCFA-------GSQMNMN------------------SSVSASDSKKLRVS 186
PGF +RAA+ SCF G+QM MN S VS+S S K S
Sbjct: 100 PGFVQRAAKFSCFGSKSFNERGNQMVMNNVELAQRSHNLMENGMKLSRVSSSPSLKTFGS 159
Query: 187 RSSTPESNNN-----------ADSKEGSSLSEQ------ITSQTVTDSNPRKRKSIQRPK 229
+ E+ N+ A+S+E S +SEQ I + D N RKRK+ K
Sbjct: 160 QMVNHENKNSSLQQENEKMEVANSQEESKISEQNTPNGEIGVKASPDMNSRKRKA-SSSK 218
Query: 230 AKETPPTSDPKVVAENPEDSNSMRSKQDE--------------------NKSDSSKTKDN 269
K T+ K V + ED N+ + K +E N + + K +
Sbjct: 219 GKAPNSTNPTKGVEGSGEDFNAKKIKANEGERNENGVRNMEEEIKEGTPNAGEEKQNKSD 278
Query: 270 SKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLD 329
SKP EP KDYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCNKVTGKA+MLD
Sbjct: 279 SKPPEPQKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLD 338
Query: 330 EIINYVQSLQRQVEFLSMKLATVNPRMDLNMEAL-LSKDLFQSCGYVQHSLYPGDCSVQT 388
EIINYVQSLQRQVEFLSMKL++VN +MDL++E+L +SKD+FQS +Q+S++ D SV +
Sbjct: 339 EIINYVQSLQRQVEFLSMKLSSVNTKMDLSIESLVVSKDIFQSNNSLQNSIFQLDSSVPS 398
Query: 389 FPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPINGHGEVGP-RVP-S 446
F + QPQQ + ++ N N + S+ L+SSL N + LP +NG E G + P +
Sbjct: 399 FYGQ-QPQQNQAIHNNIPNTNG-SHCSVEPLDSSLCHNIGMHLPFLNGFNEGGSQQYPLT 456
Query: 447 LWDDDLQSLVQMGFNQNQPR-------SLNGSMATTQMKIEM 481
++DL ++VQMGF Q R S NGS +TQMKIE+
Sbjct: 457 FSEEDLNTVVQMGFGQTSNRNTPIHSPSFNGSNQSTQMKIEL 498
>gi|15231450|ref|NP_187390.1| transcription factor bHLH62 [Arabidopsis thaliana]
gi|75313804|sp|Q9SRT2.1|BH062_ARATH RecName: Full=Transcription factor bHLH62; AltName: Full=Basic
helix-loop-helix protein 62; Short=AtbHLH62; Short=bHLH
62; AltName: Full=Transcription factor EN 85; AltName:
Full=bHLH transcription factor bHLH062
gi|6041855|gb|AAF02164.1|AC009853_24 unknown protein [Arabidopsis thaliana]
gi|51968880|dbj|BAD43132.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51969134|dbj|BAD43259.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|111074462|gb|ABH04604.1| At3g07340 [Arabidopsis thaliana]
gi|332641009|gb|AEE74530.1| transcription factor bHLH62 [Arabidopsis thaliana]
Length = 456
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 211/511 (41%), Positives = 287/511 (56%), Gaps = 85/511 (16%)
Query: 1 MEKEDLLMNEGVNSTPPTWSS----------CNFSSEKVITNCCLNPNWDYSMDQSDPFE 50
ME E L MN GV S PP +S + ++ V + N W+ S +QS F+
Sbjct: 1 MENE-LFMNAGV-SHPPVMTSPSSSSAMLKWVSMETQPVDPSLSRNLFWEKSTEQSI-FD 57
Query: 51 AALSSIVSSPAASNAPTTCSVIIPADGGGDNVMIRELIGRLGSICNSGEVLPQSYIQAQN 110
+ALSS+VSSP SN+ + + GG+NV++RELIG+LG+I G++ I A N
Sbjct: 58 SALSSLVSSPTPSNSNFSVGGV-----GGENVIMRELIGKLGNI---GDIYG---ITASN 106
Query: 111 NNNSNTCCYSTPLNSPPLPKLNLSMIRGSKSSNNLPIPAADPGFAERAARLSCFAGSQMN 170
N+ CY+TP++SPP P SM+ +K++ + + DPGFAERAAR SCF N
Sbjct: 107 GNS----CYATPMSSPP-PG---SMME-TKTTTPMAELSGDPGFAERAARFSCFGSRSFN 157
Query: 171 MNSSVSASDSKKLRVSRSSTPESNNN-------------ADSKEGSSLSEQITSQTVTDS 217
SR+++P NN + S L+ + + +
Sbjct: 158 ---------------SRTNSPFPINNEPPITTNEKMPRVSSSPVFKPLASHVPAGESSGE 202
Query: 218 NPRKRKSIQRPKAKETPPT--SDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEP 275
RKRK+ K+K+ P+ S K + E EDS+ R K+ E D +K+ ++P
Sbjct: 203 LSRKRKT----KSKQNSPSAVSSSKEIEEK-EDSDPKRCKKSEENGDKTKS------IDP 251
Query: 276 PKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYV 335
KDYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCNKVTGKA+MLDEIINYV
Sbjct: 252 YKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYV 311
Query: 336 QSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQH--SLYPGDCSVQTFPSRY 393
QSLQRQVEFLSMKL++VN R+D NM+ALLSKD+F S + H + D S +T +
Sbjct: 312 QSLQRQVEFLSMKLSSVNTRLDFNMDALLSKDIFPSSNNLMHHQQVLQLDSSAETLLGDH 371
Query: 394 QPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPINGHGEVGPRVPSLWDDDLQ 453
H + +N + + IN L +S R+ LP + + + + +DDL
Sbjct: 372 ------HNKNLQLNPDISSNNVINPLETSETRSFISHLPTLAHFTDSISQYSTFSEDDLH 425
Query: 454 SLVQMGFNQNQPRSLN-GS--MATTQMKIEM 481
S++ MGF QN+ + LN GS + MK E+
Sbjct: 426 SIIHMGFAQNRLQELNQGSSNQVPSHMKAEL 456
>gi|51971323|dbj|BAD44326.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51971523|dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
Length = 456
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 211/511 (41%), Positives = 286/511 (55%), Gaps = 85/511 (16%)
Query: 1 MEKEDLLMNEGVNSTPPTWSS----------CNFSSEKVITNCCLNPNWDYSMDQSDPFE 50
ME E L MN GV S PP +S + ++ V + N W+ S +QS F+
Sbjct: 1 MENE-LFMNAGV-SHPPVMTSPSSSSAMLKWVSMETQPVDPSLSRNLFWEKSTEQSI-FD 57
Query: 51 AALSSIVSSPAASNAPTTCSVIIPADGGGDNVMIRELIGRLGSICNSGEVLPQSYIQAQN 110
+ALSS+VSSP SN+ + + GG+NV++RELIG+LG+I G++ I A N
Sbjct: 58 SALSSLVSSPTPSNSNFSVGGV-----GGENVIMRELIGKLGNI---GDIYG---ITASN 106
Query: 111 NNNSNTCCYSTPLNSPPLPKLNLSMIRGSKSSNNLPIPAADPGFAERAARLSCFAGSQMN 170
N+ CY+TP++SPP P SM+ +K++ + + DPGFAERAAR SCF N
Sbjct: 107 GNS----CYATPMSSPP-PG---SMME-TKTTTPMAELSGDPGFAERAARFSCFGSRSFN 157
Query: 171 MNSSVSASDSKKLRVSRSSTPESNNN-------------ADSKEGSSLSEQITSQTVTDS 217
SR+++P NN + S L+ + + +
Sbjct: 158 ---------------SRTNSPFPINNEPPITTNEKMPRVSSSPVFKPLASHVPAGESSGE 202
Query: 218 NPRKRKSIQRPKAKETPPT--SDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEP 275
RKRK+ K+K+ P+ S K + E EDS+ R K+ E D +K+ ++P
Sbjct: 203 LSRKRKT----KSKQNSPSAVSSSKEIEEK-EDSDPKRCKKSEENGDKTKS------IDP 251
Query: 276 PKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYV 335
KDYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCNKVTGKA+MLDEIINYV
Sbjct: 252 YKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYV 311
Query: 336 QSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQH--SLYPGDCSVQTFPSRY 393
QSLQRQVEFLSMKL++VN R+D NM+ALLSKD+F S + H + D S +T +
Sbjct: 312 QSLQRQVEFLSMKLSSVNTRLDFNMDALLSKDIFPSSNNLMHHQQVLQLDSSAETLLGDH 371
Query: 394 QPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPINGHGEVGPRVPSLWDDDLQ 453
H + +N + + IN L +S R+ LP + + + + DDL
Sbjct: 372 ------HNKNLQLNPDISSNNVINPLETSETRSFISHLPTLAHFTDSISQYSTFSGDDLH 425
Query: 454 SLVQMGFNQNQPRSLN-GS--MATTQMKIEM 481
S++ MGF QN+ + LN GS + MK E+
Sbjct: 426 SIIHMGFAQNRLQELNQGSSNQVPSHMKAEL 456
>gi|388499536|gb|AFK37834.1| unknown [Lotus japonicus]
Length = 493
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 219/515 (42%), Positives = 288/515 (55%), Gaps = 110/515 (21%)
Query: 17 PTWSSCN--FSSEKVITNCCLNP-NWDYSMDQ-SDPFEAALSSIVSSPAASNAPTTCSVI 72
PTW S SSE+ +C N W+ S D + F++A+SS+VSSPAASN+ +
Sbjct: 22 PTWQSPPPPQSSEQN-QDCFYNTQTWENSTDHHALHFDSAMSSMVSSPAASNSNMSS--- 77
Query: 73 IPADGGGDNVMIRELIGRLGSICNSGEVLPQSYIQAQNNNNSNTCCYSTPLNSPPLPKLN 132
DN IRELIG+LG+I G+ + +++ S LNS
Sbjct: 78 -------DNFAIRELIGKLGNIGGGGDEISPGFLK------------SMALNS------- 111
Query: 133 LSMIRGSKSSNNLPIPAADPGFAERAARLSCFA-------GSQMNMNSSVSASDSKK--- 182
+ ++DPGFA RAA+ SC GSQ+ +N++ + S++
Sbjct: 112 -----------TVAEFSSDPGFAARAAKFSCIGSRSFNGRGSQLGLNNNAELTQSQRSPS 160
Query: 183 ------LRVSRSSTPESN------NNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPKA 230
L SS+P +S+E S++SEQ S V N RKRK+ R KA
Sbjct: 161 LMENGMLLPRVSSSPSLKLLGSQMEGTNSQEESTISEQKPSPCV---NSRKRKASSRGKA 217
Query: 231 KETPPTSDPKVVAENPEDSNSMRSK--QDENK-------------------SDSSKTKDN 269
KET +++P + AE ED N+ R K +DE K D + +
Sbjct: 218 KETVNSTNPPMDAEASEDQNAKRGKPNEDEGKEKNGSVKAEEDSKAGTSSGGDEKQNMSS 277
Query: 270 SKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLD 329
SKP EPPKDYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCNKVTGKA+MLD
Sbjct: 278 SKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLD 337
Query: 330 EIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQTF 389
EIINYV+SLQRQVEFLSMKL++VN R+D + E+L+SKD+FQS + L+P D S Q F
Sbjct: 338 EIINYVRSLQRQVEFLSMKLSSVNTRLDFSTESLISKDIFQSNNSLAQPLFPLDSSAQAF 397
Query: 390 PSRYQPQQGSHLTSSGINNNAEN----QFSINALNSS-LHRNHNIQLPPINGHGEVGPRV 444
+ QPQQ +S I+NN N S++ L++ L +N +QL P+NG E G +
Sbjct: 398 YGQ-QPQQ-----NSAIHNNFPNGTVTHTSVDPLHTGDLCQNLGMQLLPLNGINEGGSQF 451
Query: 445 P-SLWDDDLQSLVQMGFNQNQPR-------SLNGS 471
P + +DDL ++VQMGF Q R S+NGS
Sbjct: 452 PLTFSEDDLHTIVQMGFGQTANRKTPIRFQSINGS 486
>gi|148906813|gb|ABR16552.1| unknown [Picea sitchensis]
Length = 605
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 170/356 (47%), Positives = 217/356 (60%), Gaps = 55/356 (15%)
Query: 178 SDSKKLRVSRSSTP-----------ESNNNAD------SKEGSSLSEQIT-----SQTVT 215
+D K R+SRSSTP S N +D +E SS S+QI S+T+
Sbjct: 253 TDRKISRISRSSTPVSTDDMKQRLATSGNESDEAEFSTGREESSCSDQIAGREPGSKTLN 312
Query: 216 DSNPRKRKSIQRPKAKETP-------------------PTSDPKVVAENPEDSNSMRSKQ 256
+ N RKR+ + + KAK+TP PT K + + +SK
Sbjct: 313 EVNGRKRRVLSKAKAKDTPSAVASSGGRETKSLEADESPTKRYKGAEVGSNEKDDAKSKA 372
Query: 257 DEN------KSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKF 310
+++ +S +TKD K EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKF
Sbjct: 373 EQSTILSTGESSPKQTKDIVKTPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKF 432
Query: 311 LQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQ 370
LQDLVPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR+D NM+ L++KD+ Q
Sbjct: 433 LQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNMDGLIAKDMLQ 492
Query: 371 SCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQ 430
S G L+ D + FP +QPQQG G+ E + + +L R N Q
Sbjct: 493 SHGSSPRMLFSTDPTA-AFPQLHQPQQGP--VQVGVTCGTEGHRMGHPVEGALRRTMNAQ 549
Query: 431 LPPINGHGEVGPRVPSLWDDDLQSLVQMGFNQNQ-----PRSLNGSMATTQMKIEM 481
P I+G+G+ P+V ++WD+DLQS+VQMGF QN+ + +GS+ T+ MKIE+
Sbjct: 550 PPCIDGYGDSIPQVANVWDEDLQSVVQMGFGQNRQSPFTSQGFHGSVPTSHMKIEL 605
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 76/140 (54%), Gaps = 31/140 (22%)
Query: 38 NWDYSMDQSDPFEAALSSIVS-SPAASNAPTTCSVIIPADGGGDNVMIRELIGRLGS-IC 95
NW+ ++QS PF+++LS +VS SP A++ P+ D++ IRELIGRLG IC
Sbjct: 60 NWEPLIEQSIPFQSSLSPMVSPSPPATSLPS------------DSIAIRELIGRLGGNIC 107
Query: 96 NSGEVLPQSYIQAQNNNNSNTCCYSTPLNSPPLPKLNLSM--------IRGSKSS--NNL 145
+ L + + N PLNS P LNL++ I+G K + +NL
Sbjct: 108 SVSGPLGSTM-----DTVLNMGTAWNPLNSSP--NLNLAVDPSKGALSIQGPKHTPPHNL 160
Query: 146 PIPAADPGFAERAARLSCFA 165
++DPGFAERAAR SCF
Sbjct: 161 AQFSSDPGFAERAARFSCFG 180
>gi|297833524|ref|XP_002884644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330484|gb|EFH60903.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 456
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 206/508 (40%), Positives = 277/508 (54%), Gaps = 79/508 (15%)
Query: 1 MEKEDLLMNEGVNSTPPTWSS----------CNFSSEKVITNCCLNPNWDYSMDQSDPFE 50
ME E L MN G +S P +S + ++ V + N W+ S +QS F
Sbjct: 1 MENE-LFMNAGASSHTPVMTSPSSSPAMLNWVSMETQPVDPSLGCNLFWEKSTEQSI-FH 58
Query: 51 AALSSIVSSPAASNAPTTCSVIIPADGGGDNVMIRELIGRLGSICNSGEVLPQSYIQAQN 110
+ALSS+VSSP SN+ + GG+NV+IRELIGRL +I G++ Y +
Sbjct: 59 SALSSLVSSPTPSNSNFS---------GGENVVIRELIGRLSNI---GDI----YGTPAS 102
Query: 111 NNNSNTCCYSTPLNSPPLPKLNLSMIRGSKSSNNLPIP--AADPGFAERAARLSCFAGSQ 168
N N + CY+TP++SP ++ ++ +PI + DPGFAERAAR SCF
Sbjct: 103 NGNVSGSCYATPMSSPTPGRMMVT-------KTTMPITEFSGDPGFAERAARFSCFGSRS 155
Query: 169 MNM---------NSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNP 219
N N A++ K R+S S + L + + +
Sbjct: 156 FNGRTNSPFPINNEQPVATNEKMPRISSSPVLKP-----------LVSHVPAGESSGEYS 204
Query: 220 RKRKSIQRPKAKE-TPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKD 278
RKRK+ K+K+ +P T P E EDS+ R K+ E+ D +K+ ++P KD
Sbjct: 205 RKRKA----KSKQNSPSTVSPSKEIEEKEDSDPKRCKKSEDNGDKTKS------IDPYKD 254
Query: 279 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 338
YIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCNKVTGKA+MLDEIINYVQSL
Sbjct: 255 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 314
Query: 339 QRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQH--SLYPGDCSVQTFPSRYQPQ 396
QRQVEFLSMKL++VN R+D NM+ALLSKD+F S + H + D S +T +
Sbjct: 315 QRQVEFLSMKLSSVNTRLDFNMDALLSKDIFPSSNNLMHHQHVLQLDSSAETLLGDH--- 371
Query: 397 QGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPINGHGEVGPRVPSLWDDDLQSLV 456
H + +N + IN +S R+ LP + + + + +DDL S++
Sbjct: 372 ---HNNNLRLNPDISCNNIINPSETSETRSFISHLPTLAHFTDSISQYSTFSEDDLTSII 428
Query: 457 QMGFNQNQPRSLN-GS--MATTQMKIEM 481
QMGF QN+ LN GS + MK E+
Sbjct: 429 QMGFAQNRLHELNHGSSKQVPSHMKAEL 456
>gi|20127064|gb|AAM10951.1|AF488595_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 450
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 207/504 (41%), Positives = 283/504 (56%), Gaps = 84/504 (16%)
Query: 8 MNEGVNSTPPTWSS----------CNFSSEKVITNCCLNPNWDYSMDQSDPFEAALSSIV 57
MN GV S PP +S + ++ V + N W+ S +QS F++ALSS+V
Sbjct: 1 MNAGV-SHPPVMTSPSSSSAMLKWVSMETQPVDPSLSRNLFWEKSTEQSI-FDSALSSLV 58
Query: 58 SSPAASNAPTTCSVIIPADGGGDNVMIRELIGRLGSICNSGEVLPQSYIQAQNNNNSNTC 117
SSP SN+ + + GG+NV++RELIG+LG+I G++ I A N N+
Sbjct: 59 SSPTPSNSNFSVGGV-----GGENVIMRELIGKLGNI---GDIYG---ITASNGNS---- 103
Query: 118 CYSTPLNSPPLPKLNLSMIRGSKSSNNLPIPAADPGFAERAARLSCFAGSQMNMNSSVSA 177
CY+TP++SPP P SM+ +K++ + + DPGFAERAAR SCF N
Sbjct: 104 CYATPMSSPP-PG---SMME-TKTTTPMAELSGDPGFAERAARFSCFGSRSFN------- 151
Query: 178 SDSKKLRVSRSSTPESNNN-------------ADSKEGSSLSEQITSQTVTDSNPRKRKS 224
SR+++P NN + S L+ + + + RKRK+
Sbjct: 152 --------SRTNSPFPINNEPPITTNEKMPRVSSSPVFKPLASHVPAGESSGELSRKRKT 203
Query: 225 IQRPKAKETPPT--SDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHV 282
K+K+ P+ S K + E EDS+ R K+ E D +K+ ++P KDYIHV
Sbjct: 204 ----KSKQNSPSAVSSSKEIEEK-EDSDPKRCKKSEENGDKTKS------IDPYKDYIHV 252
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RARRGQATDSHSLAERVRREKISERMK LQDLVPGCNKVTGKA+MLDEIINYVQSLQRQV
Sbjct: 253 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 312
Query: 343 EFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQH--SLYPGDCSVQTFPSRYQPQQGSH 400
EFLSMKL++VN R+D NM+ALLSKD+F S + H + D S +T + H
Sbjct: 313 EFLSMKLSSVNTRLDFNMDALLSKDIFPSSNNLMHHQQVLQLDSSAETLLGDH------H 366
Query: 401 LTSSGINNNAENQFSINALNSSLHRNHNIQLPPINGHGEVGPRVPSLWDDDLQSLVQMGF 460
+ +N + + IN L +S R+ LP + + + + +DDL S++ MGF
Sbjct: 367 NKNLQLNPDISSNNVINPLETSETRSFISHLPTLAHFTDSISQYSTFSEDDLHSIIHMGF 426
Query: 461 NQNQPRSLN-GS--MATTQMKIEM 481
QN+ + LN GS + MK E+
Sbjct: 427 AQNRLQELNQGSSNQVPSHMKAEL 450
>gi|449466372|ref|XP_004150900.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 412
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 201/464 (43%), Positives = 262/464 (56%), Gaps = 90/464 (19%)
Query: 56 IVSSPAASNAPTTCSVIIPADGGGDNVMIRELIGRLGSICNSGEVLPQSYIQAQNNNNSN 115
+VSSPAASN+ T ++ IRELIG+LG N+
Sbjct: 1 MVSSPAASNSNIT----------NESFAIRELIGKLGG-----------------NSERR 33
Query: 116 TCCYSTPLNSPPLPKLNLSMIRGSKSSNNLPIPAADPGFAERAARLSCFA-----GSQM- 169
S + LP + S+ ++DPGFAERAAR SCF G Q+
Sbjct: 34 ILELSNSTAAAALPPSSSSVAEF----------SSDPGFAERAARFSCFGSRSFNGRQLT 83
Query: 170 ----NMNSSVSASDSKKLRVSRS----------STPESNNNADSKEGSSLSEQITSQTVT 215
N S +S + K RVS S + E NN+ S+E S +++Q T
Sbjct: 84 NEFGNYRSHLSIGNEKLSRVSSSPSLKALGSEMNLQEHKNNSSSQEDES---SLSNQDKT 140
Query: 216 DSNPRKRKSIQRPKAKE-----TPPTSDPKVVA-----ENPEDSNSMRSKQDENKSDSSK 265
+NPRKRK+I + K KE TP PK + EN + ++ K DEN ++ +
Sbjct: 141 ITNPRKRKAITKAKLKEPVVEATPEKESPKKLKTVERKENVKTEEDLK-KNDENSAEERQ 199
Query: 266 TKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKA 325
TK NSKP E PKDYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCNKVTGKA
Sbjct: 200 TKANSKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKA 259
Query: 326 VMLDEIINYVQSLQRQVEFLSMKLATVN-PRMDLNMEALL-SKDLFQSCGYVQH-SLYPG 382
+MLDEIINYVQSLQ QVEFLSMKLA+VN R+D N+++L+ SK ++QS + H + P
Sbjct: 260 LMLDEIINYVQSLQHQVEFLSMKLASVNTTRVDFNVDSLISSKQMYQSGTSLTHPQISPI 319
Query: 383 DCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPINGHGEVGP 442
D S +F Y Q S T+S S++ ++S L +N IQLPP+N +
Sbjct: 320 DSSTSSF---YGHQNSSLPTTS--------HCSVDPIDSVLCQNLPIQLPPLNSFLQNPS 368
Query: 443 RVPSLWDDDLQSLVQMGFNQNQPRSL-----NGSMATTQMKIEM 481
+ P+ +D+LQS+VQMGF QNQ + + N ++ + QMKIE+
Sbjct: 369 QYPNFGEDELQSIVQMGFVQNQTQEISLQSHNFNLGSDQMKIEL 412
>gi|222619751|gb|EEE55883.1| hypothetical protein OsJ_04533 [Oryza sativa Japonica Group]
Length = 483
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 207/515 (40%), Positives = 263/515 (51%), Gaps = 112/515 (21%)
Query: 32 NCCLNPNWDYSMDQS--DPFEAALSSIVSSPAASNAPTTCSVIIPAD--GGGDNVMIREL 87
+C LN NWD SMD + + ALSS+VSSPA SN+ I P GGG
Sbjct: 16 SCFLNLNWDQSMDAAAGGHLDPALSSMVSSPA-SNSTGALHGISPQPHYGGG-------- 66
Query: 88 IGRLGSICNSGEVLPQSYIQAQNNNNSNTCCYSTPLNSPPLPKLNLSMIRGSKSSNNLPI 147
TPL+SPP KLNLSM+ P
Sbjct: 67 ---------------------------------TPLSSPP--KLNLSMMGQFHHYAAPPQ 91
Query: 148 PAADPGFAERAARLSCFAG--------------SQMNMNSSVSASDSKKLRV------SR 187
ADPGFAERAARLS F +Q + + +A SK++ + S
Sbjct: 92 FLADPGFAERAARLSGFDARGGGGGGGYGGAGPAQFGLPDAGAAGASKEMELGNTRDESS 151
Query: 188 SSTPESNNNADSKEGSSLSEQITSQTVTDSNPR-------KRKSIQR-PKAKETP----- 234
S P DS +G + ++ + + + +R+ +R P A P
Sbjct: 152 VSDPAPRRRRDSAQGGFRRQCTEAEGLREGQRQGQPHVHLRRQGTRRIPLAMAAPHHSWT 211
Query: 235 -------------------PTSDPKVVAENPEDSNSMRSKQ--DENKSDSSKTKD-NSKP 272
T + AE E+S ++ Q EN + KD +SKP
Sbjct: 212 ERFHLSSVLQEDSSGKRCKSTEESNAAAE--ENSGKGKAAQSNSENGGGKKQGKDSSSKP 269
Query: 273 VEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEII 332
EPPKDYIHVRARRG+ATDSHSLAERVRREKIS+RMK LQDLVPGCNKV GKAVMLDEII
Sbjct: 270 PEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEII 329
Query: 333 NYVQSLQRQVEFLSMKLATVNPRMDL-NMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPS 391
NYVQSLQRQVEFLSMKLATVNP++D N+ LL+KD+ QSC +Q S +P + S P
Sbjct: 330 NYVQSLQRQVEFLSMKLATVNPQLDFNNLPNLLAKDMHQSCSPLQSSHFPLETSGAPLPY 389
Query: 392 RYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPINGHGEVGPRVPSLWDDD 451
QPQQG+ L G+ N +NQ S++ L+ + R P +NG + +V + W DD
Sbjct: 390 INQPQQGNPL-GCGLTNGMDNQGSMHPLDPAFCRPMGSHHPFLNGVSDAASQVGAFWQDD 448
Query: 452 LQSLVQMGFNQNQP-----RSLNGSMATTQMKIEM 481
LQS+VQM Q+Q S NGS+ T MK+E+
Sbjct: 449 LQSVVQMDMGQSQEIATSSNSYNGSLQTVHMKMEL 483
>gi|357126478|ref|XP_003564914.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 475
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 196/490 (40%), Positives = 249/490 (50%), Gaps = 72/490 (14%)
Query: 32 NCCLNPNWDYSMDQ------SDPFEAALSSIVSSPAASNAPTTCSV----IIPADGGGDN 81
+C LN NWD SMD + AL S+VSSPAASN+ T + I P GG
Sbjct: 18 SCFLNLNWDQSMDAPAHRGAGAHLDPALGSMVSSPAASNSTATEGLALHGISPHYGGTPP 77
Query: 82 VMIR-ELIGRLGSICNSGEVLPQSYIQAQNNNNSNTCCYSTPLNSPPLPKLNLSMIRGSK 140
+ ++G+ Y Q S LP L M GS
Sbjct: 78 PKLDLSMMGQFH----------HHYPPPQAGGGSGGG----------LPTLENLMPMGS- 116
Query: 141 SSNNLPIPAADPGFAERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNADSK 200
L ADPGFAERAARLS D + + E N D
Sbjct: 117 ----LDQFLADPGFAERAARLSG---FGGPGPGQFGLPDDGPIGALKEL--ELGNARDES 167
Query: 201 EGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQ---- 256
S + ++ + D N RKRK+ + K K++ ++ K + EDS + R K
Sbjct: 168 SVSDPASEMALKGAPDGNARKRKAGSKGKGKDSSMSTSAKDLLAK-EDSAAKRCKSMEES 226
Query: 257 ----------------DENKSDSSKTKDN--SKPVEPPKDYIHVRARRGQATDSHSLAER 298
EN + KD SK EPPKDYIHVRARRG+ATDSHSLAER
Sbjct: 227 NGAEENCAKGKAAQSSSENGGGKKQGKDAGASKLPEPPKDYIHVRARRGEATDSHSLAER 286
Query: 299 VRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDL 358
VRREKIS+RMK LQDLVPGCNKV GKAVMLDEIINYVQSLQRQVEFLSMKLATVNP++D
Sbjct: 287 VRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDF 346
Query: 359 -NMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSI- 416
N+ LL+KD+ QSCG +Q S +P + S P QP QGS+ G+ + ++Q S+
Sbjct: 347 NNLPNLLAKDMQQSCGQLQSSHFPLEASGAPLPYMSQPHQGSNPLDCGMTDGMDDQGSMH 406
Query: 417 NALNSSLHRNHNIQLPPINGHGEVGPRVPSLWDDDLQSLVQMGFNQNQP-----RSLNGS 471
+ L+ + R +NG + +V + W DLQS+VQM Q+Q S +GS
Sbjct: 407 HQLDPAFCRPMGSHHHFLNGVSDAASQVGAFW-QDLQSVVQMDMGQSQEIATSSNSYDGS 465
Query: 472 MATTQMKIEM 481
+ T MK+E+
Sbjct: 466 LQTVHMKMEL 475
>gi|242059665|ref|XP_002458978.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
gi|241930953|gb|EES04098.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
Length = 484
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 182/415 (43%), Positives = 234/415 (56%), Gaps = 58/415 (13%)
Query: 121 TPLNSPPLPKLNLSMIR----------GSKSSNNLPIPA------------ADPGFAERA 158
TPL+SPP KLNLSM+ G + + LPI ADPGFAERA
Sbjct: 74 TPLSSPP--KLNLSMMGQFHHYPPPQVGGAAPSGLPILENLMPMAHLDQFLADPGFAERA 131
Query: 159 ARLSCFAGSQMNMNSSVSASDSKKLR----VSRSSTPESNNNADSK---EGSSLSEQITS 211
ARLS F G + L + E N D + +S S ++
Sbjct: 132 ARLSGFDGRPGGSGYGGAVPGQFGLPDADPIDALKELELGNGRDESSVSDPASASAEMAL 191
Query: 212 QTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAE--------------NPEDSNSMRSKQD 257
+ +D N +KRK+ + K K+ P ++ K +A+ N + NS + K
Sbjct: 192 KGPSDGNAKKRKASGKGKGKDGPGSTAAKDLAKEESGGKRCKSADESNGAEDNSTKGKAA 251
Query: 258 ENKSDSSKTKDN----SKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQD 313
++ S++ K SKP EPPKDYIHVRARRG+ATDSHSLAERVRREKIS+RMK LQD
Sbjct: 252 QSNSENGGKKQGKDSTSKPPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQD 311
Query: 314 LVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDL-NMEALLSKDLFQSC 372
LVPGCNKV GKAVMLDEIINYVQSLQRQVEFLSMKLATVNP++D N+ LL KD+ QSC
Sbjct: 312 LVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNNLPNLLPKDIHQSC 371
Query: 373 GYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLP 432
G +Q+S +P + S P QP QG+ L S ++Q S++ L+ + R N Q P
Sbjct: 372 GPLQNSHFPLETSGAPLPYLNQPHQGNPLGCS--LTGMDSQSSMHPLDPAFCRPMNSQHP 429
Query: 433 PINGHGEVGPRVPSLWDDDLQSLVQMGFNQNQP------RSLNGSMATTQMKIEM 481
+NG + +V + W DDLQS+V M Q+Q S NGS+ T MK+E+
Sbjct: 430 FLNGVSDAASQVGTFWQDDLQSVVHMDIGQSQEIAPTSSNSYNGSLQTVHMKMEL 484
>gi|297835410|ref|XP_002885587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331427|gb|EFH61846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 374
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 147/287 (51%), Positives = 168/287 (58%), Gaps = 45/287 (15%)
Query: 214 VTDSNPRKRKSIQRPKAKETPPTS-----DPKVVAENPEDSNSMRSKQDE--------NK 260
T SN RKRKSI KE+P +S + KV EN RSKQDE K
Sbjct: 112 TTKSNSRKRKSIPSGNGKESPASSSLTASNSKVSGENGGSKGGKRSKQDEAGSSKNGVEK 171
Query: 261 SDS-SKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCN 319
DS KD++KP E PKDYIHVRARRGQATDSHSLAER RREKISERM LQDLVPGCN
Sbjct: 172 CDSKGDNKDDAKPPEAPKDYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCN 231
Query: 320 KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSL 379
++TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM+ N A LS ++ Q + SL
Sbjct: 232 RITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEFNANAALSTEMIQPGESLTQSL 291
Query: 380 YPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPINGHGE 439
Y CS Q PS Y +L ++ R + Q P +G
Sbjct: 292 YAMACSEQRLPSAYY-----------------------SLGKNMPRFSDTQFPSNDGF-- 326
Query: 440 VGPRVPSLWD-DDLQSLVQMGFNQNQPRSLN-----GSMATTQMKIE 480
V P W+ +DLQS+VQMGF Q +S N S T QMK+E
Sbjct: 327 VQAETPGFWENNDLQSIVQMGFGDIQQQSNNNNCKKSSEPTLQMKLE 373
>gi|308080388|ref|NP_001183599.1| uncharacterized protein LOC100502193 [Zea mays]
gi|238013326|gb|ACR37698.1| unknown [Zea mays]
gi|413951548|gb|AFW84197.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 480
Score = 241 bits (614), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 198/519 (38%), Positives = 247/519 (47%), Gaps = 123/519 (23%)
Query: 32 NCCLNPNWDYSM--DQSDPFEAALSSIVSSPAASNAPTTCSVIIPADGGGDNVMIRELIG 89
+C LN NWD SM DQ DP ALSS+VSSPA SN+ +V DG R L G
Sbjct: 16 SCFLNLNWDQSMAADQLDP---ALSSMVSSPA-SNSTAAAAVT---DG-------RALHG 61
Query: 90 RLGSICNSGEVLPQSYIQAQNNNNSNTCCYSTPLNSPPLPKLNLSMIRGSKSSNNLPIPA 149
+ PQ TPL+SPP KLNL + ++ P P
Sbjct: 62 ----------ISPQQQYGG------------TPLSSPP--KLNL-FHQTRPQFHHFPPPQ 96
Query: 150 --------------------ADPGFAERAARLSCF------------------------- 164
ADPGFAERAARLS F
Sbjct: 97 VGGLPILENLMPMGHLDQFLADPGFAERAARLSGFDGRPGGSGYGGVGVPGQFGIPDAGP 156
Query: 165 --AGSQMNMN-----SSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDS 217
A ++ + SSVS S ++ + P N K + +
Sbjct: 157 IGALKELELGNGRDESSVSDPASGSAEMALNKGPSDGNAKKRKASGKGKGKDGPGSAAAG 216
Query: 218 NPRKRKSIQRPK-------AKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNS 270
++ S +R + A++ PT+ K + E+ + + E S TK
Sbjct: 217 AAKEESSGKRCRSADESSGAEDNNPTTKGKAAQSSSENGGGRKQQGKE-----SATK--- 268
Query: 271 KPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDE 330
P E PKDYIHVRARRG+ATDSHSLAERVRREKIS+RMK LQDLVPGCNKV GKAVMLDE
Sbjct: 269 PPAEAPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDE 328
Query: 331 IINYVQSLQRQVEFLSMKLATVNPRMDLNM--EALLSKDLFQSCGYVQHSLYPGDCSVQT 388
IINYVQSLQRQVEFLSMKLATVNP++D N LL KD+ Q CG +P + S
Sbjct: 329 IINYVQSLQRQVEFLSMKLATVNPQLDFNSLPNLLLPKDIHQPCGPPH---FPLETSGAP 385
Query: 389 FPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPINGHGEVGPRVPSLW 448
P QP GS L S++ L+++ R N Q P +NG + +V + W
Sbjct: 386 LPYLSQPHHGSPLGCCMDTQGG----SMHPLDAAFCRPMNPQHPFLNGASDAASQVGTFW 441
Query: 449 DDDLQSLVQMGFNQNQP------RSLNGSMATTQMKIEM 481
DDLQS+V M Q+Q S NGS+ T MK+E+
Sbjct: 442 QDDLQSVVHMDIGQSQEIAPTSSNSYNGSLQTVHMKMEL 480
>gi|297792043|ref|XP_002863906.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
gi|297309741|gb|EFH40165.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
Length = 498
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 202/530 (38%), Positives = 277/530 (52%), Gaps = 88/530 (16%)
Query: 5 DLLMNEGVNSTPPTWSSCNF------SSEKVITNCCLNPN--------WDYSMDQSDP-- 48
+L MN PP + +F SS ++ ++PN W+ S +Q
Sbjct: 4 ELFMN--TEFPPPPEMATHFEPPPSSSSAMMLNWALMDPNPPQDSSFIWEKSTEQQQQQS 61
Query: 49 -FEAALSSIVSSPAASNAPTTCSVIIPADGGGDNVMIRELIGRLGSICNSGEVLPQSYIQ 107
F++ALSS+VSSP SN+ + GGGD +IRELIG+LG+I N+ + Y
Sbjct: 62 IFDSALSSLVSSPTPSNSNFS-------GGGGDGFLIRELIGKLGNIGNNNNNSGEIYGT 114
Query: 108 AQNNNNSNTCCYSTPLNSPPLPKLNLSMIRGSKSSNNLPIPAADPGFAERAARLSCFAGS 167
+ + S CY+TP++SPP P S + ++++ L +ADPGFAERA+R SCF
Sbjct: 115 PMSRSAS---CYATPMSSPPPPTNTNSQMMMNRTTP-LTEFSADPGFAERASRFSCFGSR 170
Query: 168 QMNMNSSV----------SASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDS 217
N ++ + K RVS STP +L ++ +
Sbjct: 171 SFNGRTNTNLPINNGNNIVNNSGKLTRVS--STP------------ALKALVSPEVAPGG 216
Query: 218 N-PRKRKSIQRPKAKETP-----PTSDPKVVAENPEDSNSMRSKQDENKSD--------- 262
PRKRKS+ + K+KE P P+ AE E+ SK E K
Sbjct: 217 EFPRKRKSVPKGKSKENPISTASPSPSFSKTAEKKEEWGGKGSKSSEEKGGKRRREDEDE 276
Query: 263 ---SSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCN 319
+ +N+KP EPPKDYIHVRARRGQATDSHSLAERVRREKI ERMK LQDLVPGCN
Sbjct: 277 EEGEGEGNNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCN 336
Query: 320 KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN-PRMDLNMEALLSKDLFQSCGYVQHS 378
KVTGKA+MLDEIINYVQSLQRQVEFLSMKL++VN R+D N++AL+SKD+ +
Sbjct: 337 KVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVDALVSKDVMIPSS--NNR 394
Query: 379 LYPGDCSVQTFPSRYQPQQ-------GSHLTSSGINNNAENQFSINALNSSLHRNHNIQL 431
L+ ++ +Q QQ + L + +NN Q +N+L +S L
Sbjct: 395 LHEEGLQSKSSSRHHQQQQLNMYNSNNAQLLPNISSNNMMLQSPMNSLEASTLARSFTHL 454
Query: 432 PPINGHGEVGPRVPSLWDDDLQSLVQMGFNQNQPRSLNGSMATTQMKIEM 481
P + + + ++DLQS+V MG +LN + + MKIE+
Sbjct: 455 PTLTQFTDSISQYQMFSEEDLQSIVGMGV------ALNPNNESQHMKIEL 498
>gi|15239013|ref|NP_199667.1| transcription factor bHLH78 [Arabidopsis thaliana]
gi|75309142|sp|Q9FJL4.1|BH078_ARATH RecName: Full=Transcription factor bHLH78; AltName: Full=Basic
helix-loop-helix protein 78; Short=AtbHLH78; Short=bHLH
78; AltName: Full=Transcription factor EN 86; AltName:
Full=bHLH transcription factor bHLH078
gi|10177346|dbj|BAB10689.1| unnamed protein product [Arabidopsis thaliana]
gi|27754625|gb|AAO22758.1| unknown protein [Arabidopsis thaliana]
gi|28973465|gb|AAO64057.1| unknown protein [Arabidopsis thaliana]
gi|332008305|gb|AED95688.1| transcription factor bHLH78 [Arabidopsis thaliana]
Length = 498
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 197/514 (38%), Positives = 271/514 (52%), Gaps = 86/514 (16%)
Query: 5 DLLMNEGVNSTPPTWSSCNF------SSEKVITNCCLNPN--------WDYSMDQSDP-- 48
+L MN PP + +F SS ++ ++PN W+ S +Q
Sbjct: 4 ELFMN--TEFPPPPEMATHFEHQQSSSSAMMLNWALMDPNPHQDSSFLWEKSTEQQQQQS 61
Query: 49 -FEAALSSIVSSPAASNAPTTCSVIIPADGGGDNVMIRELIGRLGSICNSGEVLPQSYIQ 107
F++ALSS+VSSP SN+ + GGGD +IRELIG+LG+I N+ + Y
Sbjct: 62 IFDSALSSLVSSPTPSNSNFS-------GGGGDGFLIRELIGKLGNIGNNNNNSGEIYGT 114
Query: 108 AQNNNNSNTCCYSTPLNSPPLPKLNLSMIRGSKSSNNLPIPAADPGFAERAARLSCFAGS 167
+ + S CY+TP++SPP P + S + ++++ L +ADPGFAERAAR SCF
Sbjct: 115 PMSRSAS---CYATPMSSPPPPTNSNSQMMMNRTTP-LTEFSADPGFAERAARFSCFGSR 170
Query: 168 QMNMNSSVS----------ASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDS 217
N ++ + + K RVS + ++ + + G S
Sbjct: 171 SFNGRTNTNLPINNGNNMVNNSGKLTRVSSTPALKALVSPEVTPGGEFS----------- 219
Query: 218 NPRKRKSIQRPKAKETP-PTSDP-----KVVAENPEDSNSMRSKQDENKSDSSKTK---- 267
RKRKS+ + K+KE P T+ P K +N S S++ K +
Sbjct: 220 --RKRKSVPKGKSKENPISTASPSPSFSKTAEKNGGKGGSKSSEEKGGKRRREEEDDEEE 277
Query: 268 ---------DNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC 318
+N+KP EPPKDYIHVRARRGQATDSHSLAERVRREKI ERMK LQDLVPGC
Sbjct: 278 EGEGEGNKSNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGC 337
Query: 319 NKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN-PRMDLNMEALLSKD-LFQSCGYVQ 376
NKVTGKA+MLDEIINYVQSLQRQVEFLSMKL++VN R+D N++AL+SKD + S
Sbjct: 338 NKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVDALVSKDVMIPSSNNRL 397
Query: 377 HSLYPGDCSVQTFPSRYQPQQ-------GSHLTSSGINNNAENQFSINALNSSLHRNHNI 429
H + +Q+ S + QQ S L + +NN Q +N+L +S
Sbjct: 398 H-----EEGLQSKSSSHHHQQQLNIYNNNSQLLPNISSNNMMLQSPMNSLETSTLARSFT 452
Query: 430 QLPPINGHGEVGPRVPSLWDDDLQSLVQMGFNQN 463
LP + + + ++DLQS+V MG +N
Sbjct: 453 HLPTLTQFTDSISQYQMFSEEDLQSIVGMGVAEN 486
>gi|20127085|gb|AAM10957.1|AF488610_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 498
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 197/514 (38%), Positives = 270/514 (52%), Gaps = 86/514 (16%)
Query: 5 DLLMNEGVNSTPPTWSSCNF------SSEKVITNCCLNPN--------WDYSMDQSDP-- 48
+L MN PP + +F SS ++ ++PN W+ S +Q
Sbjct: 4 ELFMN--TEFPPPPEMATHFEHQQSSSSAMMLNWALMDPNPHQDSSFLWEKSTEQQQQQS 61
Query: 49 -FEAALSSIVSSPAASNAPTTCSVIIPADGGGDNVMIRELIGRLGSICNSGEVLPQSYIQ 107
F++ALSS+VSSP SN+ + GGGD +IRELIG+LG+I N+ + Y
Sbjct: 62 IFDSALSSLVSSPTPSNSNF-------SGGGGDGFLIRELIGKLGNIGNNNNNSGEIYGT 114
Query: 108 AQNNNNSNTCCYSTPLNSPPLPKLNLSMIRGSKSSNNLPIPAADPGFAERAARLSCFAGS 167
+ + S CY+TP++SPP P + S + ++++ L +ADPGFAERAAR SCF
Sbjct: 115 PMSRSAS---CYATPMSSPPPPTNSNSQMMMNRTTP-LTEFSADPGFAERAARFSCFGSR 170
Query: 168 QMNMNSSVS----------ASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDS 217
N ++ + + K RVS + ++ + + G S
Sbjct: 171 SFNGRTNTNLPINNGNNMVNNSGKLTRVSSTPALKALVSPEVTPGGEFS----------- 219
Query: 218 NPRKRKSIQRPKAKETP-PTSDPKVVAENPEDSNSMR--SKQDENKSDSSK--------- 265
RKRKS+ + K+KE P T+ P + N + SK E K +
Sbjct: 220 --RKRKSVPKGKSKENPISTASPSPSFSKTAEKNGGKGGSKSSEEKGGKRRREEEDDEEE 277
Query: 266 -------TKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC 318
+N+KP EPPKDYIHVRARRGQATDSHSLAERVRREKI ERMK LQDLVPGC
Sbjct: 278 EGGGEGNKSNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGC 337
Query: 319 NKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN-PRMDLNMEALLSKD-LFQSCGYVQ 376
NKVTGKA+MLDEIINYVQSLQRQVEFLSMKL++VN R+D N++AL+SKD + S
Sbjct: 338 NKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVDALVSKDVMIPSSNNRL 397
Query: 377 HSLYPGDCSVQTFPSRYQPQQ-------GSHLTSSGINNNAENQFSINALNSSLHRNHNI 429
H + +Q+ S + QQ S L + +NN Q +N+L +S
Sbjct: 398 H-----EEGLQSKSSSHHHQQQLNIYNNNSQLLPNISSNNMMLQSPMNSLETSTLARSFT 452
Query: 430 QLPPINGHGEVGPRVPSLWDDDLQSLVQMGFNQN 463
LP + + + ++DLQS+V MG +N
Sbjct: 453 HLPTLTQFTDSISQYQMFSEEDLQSIVGMGVAEN 486
>gi|22331295|ref|NP_189011.2| transcription factor bHLH77 [Arabidopsis thaliana]
gi|75311240|sp|Q9LK48.1|BH077_ARATH RecName: Full=Transcription factor bHLH77; AltName: Full=Basic
helix-loop-helix protein 77; Short=AtbHLH77; Short=bHLH
77; AltName: Full=Transcription factor EN 87; AltName:
Full=bHLH transcription factor bHLH077
gi|9293943|dbj|BAB01846.1| unnamed protein product [Arabidopsis thaliana]
gi|17529310|gb|AAL38882.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|20465453|gb|AAM20186.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332643281|gb|AEE76802.1| transcription factor bHLH77 [Arabidopsis thaliana]
Length = 371
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 143/287 (49%), Positives = 165/287 (57%), Gaps = 45/287 (15%)
Query: 214 VTDSNPRKRKSIQRPKAKETPPTS-----DPKVVAENPEDSNSMRSKQD---------EN 259
T SN RKRKSI KE+P +S + KV EN RSKQD E
Sbjct: 109 TTKSNSRKRKSIPSGNGKESPASSSLTASNSKVSGENGGSKGGKRSKQDVAGSSKNGVEK 168
Query: 260 KSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCN 319
KD++KP E PKDYIHVRARRGQATDSHSLAER RREKISERM LQDLVPGCN
Sbjct: 169 CDSKGDNKDDAKPPEAPKDYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCN 228
Query: 320 KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSL 379
++TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM+ N A LS ++ Q + SL
Sbjct: 229 RITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEFNANASLSTEMIQPGESLTQSL 288
Query: 380 YPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPINGHGE 439
Y CS Q PS Y +L ++ R + Q P +G
Sbjct: 289 YAMACSEQRLPSAYY-----------------------SLGKNMPRFSDTQFPSNDGF-- 323
Query: 440 VGPRVPSLWD-DDLQSLVQMGFN-----QNQPRSLNGSMATTQMKIE 480
V P W+ +DLQS+VQMGF Q+ + N S T QMK+E
Sbjct: 324 VHTETPGFWENNDLQSIVQMGFGDILQQQSNNNNNNCSEPTLQMKLE 370
>gi|297738215|emb|CBI27416.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 231 bits (588), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 153/381 (40%), Positives = 205/381 (53%), Gaps = 70/381 (18%)
Query: 150 ADPGFAERAARLSCFAGSQMN---------------------MNSSVSASDSKKLRVSRS 188
AD GF ERAAR SCF G + + V AS+ K
Sbjct: 137 ADSGFIERAARFSCFNGGNFSDMMNPFSIPESLNPYSRGGGMLQQDVFASNGLK------ 190
Query: 189 STPESNNNADSKEGSSLSEQITSQTVTD-------------SNPRKRKSIQRPKAKETPP 235
S P + D + +S+ ++S + ++++S Q P+ +
Sbjct: 191 SVPGGQSQKDEPSMAEISKDVSSAKQNKELGCGEPSSGKGLGSKKRKRSGQDPEIDQV-- 248
Query: 236 TSDPKVVAENPEDSNSMRSKQDEN------KSDSSKTKDNSKPVEPPKD-YIHVRARRGQ 288
P+ E +D+ ++ K D+N K+ K ++ +PPK+ YIHVRARRGQ
Sbjct: 249 KGSPQQPGEASKDNPEIQHKGDQNPSSVPSKNTGKHGKQGAQASDPPKEEYIHVRARRGQ 308
Query: 289 ATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMK 348
AT+SHSLAERVRREKISERMKFLQDLVPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSMK
Sbjct: 309 ATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK 368
Query: 349 LATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQTF-PSRYQPQQGSHLTSSGIN 407
LATVNPR+D N+E +L KD+ QS G S F P P H + G+
Sbjct: 369 LATVNPRLDFNIEGMLGKDILQS--------RVGPSSTMGFSPETTMPYPQLHPSQPGL- 419
Query: 408 NNAENQFSINALNSS---LHRNHNIQLPPI-NGHGEVGPRVPSLWDDDLQSLVQMGFNQN 463
Q + L +S + R N QL + G+ E P++P++W+D+L ++VQMGF+
Sbjct: 420 ----IQVGLPGLGNSSDAIRRTINSQLAAMSGGYKESAPQLPNVWEDELHNVVQMGFSTG 475
Query: 464 QP---RSLNGSMATTQMKIEM 481
P + LNGS+ MK E+
Sbjct: 476 APLNSQDLNGSLPPGHMKAEL 496
>gi|293333026|ref|NP_001168271.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194707870|gb|ACF88019.1| unknown [Zea mays]
gi|223947139|gb|ACN27653.1| unknown [Zea mays]
gi|414879034|tpg|DAA56165.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414879035|tpg|DAA56166.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 460
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 131/257 (50%), Positives = 164/257 (63%), Gaps = 25/257 (9%)
Query: 247 EDSNSMRSKQDENKSDSSKTKDN----------SKPVEPPKDYIHVRARRGQATDSHSLA 296
E+SN + K+ + DN SKP EPPKDYIHVRARRG+ATDSHSLA
Sbjct: 207 EESNGAEENSGKGKAAAQSNSDNGGKKQGKDGASKPPEPPKDYIHVRARRGEATDSHSLA 266
Query: 297 ERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM 356
ERVRREKIS+RMK LQDLVPGCNKV GKAVMLDEIINYVQSLQRQVEFLSMKLATVNP++
Sbjct: 267 ERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQL 326
Query: 357 DL-NMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAEN-QF 414
D N+ LL KD+ QSCG +Q+S +P + S P QG+ L G+ N +N Q
Sbjct: 327 DFNNLPNLLPKDMHQSCGPLQNSHFPLETSGAPLPYL---NQGNPLIGCGLPNGMDNSQS 383
Query: 415 SINALNSSLHRNHNIQLPP-INGHGEVGPRVPSLWDDDLQSLVQMGFNQNQPRSL----- 468
S++ L+ + R + Q P +NG + +V + W DDLQS+V M Q + +
Sbjct: 384 SMHPLDPAFCRPMSSQQHPFLNGVSDAASKVGTFWQDDLQSVVHMDMGQQSQQEMAPTSS 443
Query: 469 ----NGSMATTQMKIEM 481
+GS+ T MK+E+
Sbjct: 444 NSYNDGSLQTVHMKMEL 460
>gi|357148526|ref|XP_003574799.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 401
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 156/379 (41%), Positives = 205/379 (54%), Gaps = 53/379 (13%)
Query: 120 STPLNSPPLPKLNLSMIRGSKSSNN-LPIPAADPGFAERAARLSCFAGSQMNMNSSVSAS 178
S+ LNS P+ L+ ++ G+ + + L DPGFAERAARLS F G +
Sbjct: 11 SSLLNSSPM--LDFGVLDGTGAGGDCLDKFCGDPGFAERAARLSSFNGQRF-------PG 61
Query: 179 DSKKLRVSRSSTPESNNN----ADSKEGSSLSEQI------------------------- 209
+ L P ++N A S+E SS+S+
Sbjct: 62 AAAGLFGMPPPAPAASNGDFGGAGSREASSVSDPASGMMKDANAKKRKASAAKGKAREPS 121
Query: 210 --TSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTK 267
TS V D K + A++ PK E + S S +D + K K
Sbjct: 122 LSTSGQVGDQKELDAKRCRTGDAEKKTAPVKPKA-----EQARSGSSVEDYGEPKKGKGK 176
Query: 268 DNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVM 327
N+KPVEPPKDY+HVRARRGQATDSHSLAERVRRE+IS+RMKFLQDLVPGCNKV GKA+M
Sbjct: 177 -NAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALM 235
Query: 328 LDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQ 387
LDEIINYVQSLQRQVEFLSMKLATVNP N+ LL KD++Q+CG S++ + S
Sbjct: 236 LDEIINYVQSLQRQVEFLSMKLATVNPLDFSNLPTLLHKDMYQACGPSASSVFSLESSNS 295
Query: 388 TFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPINGHGE--VGPRVP 445
FP Q + S + N+ E+Q ++N L+ +L + Q +G G + +
Sbjct: 296 AFPFSDQ----GDVFQSFVPNSMESQCTLNQLDLALSHATSAQYAFQDGTGSTNLQQQQR 351
Query: 446 SLWDDDLQSLVQMGFNQNQ 464
+ W+DDLQS+ + N Q
Sbjct: 352 NFWEDDLQSVFHVDNNNGQ 370
>gi|226530189|ref|NP_001145523.1| uncharacterized protein LOC100278938 [Zea mays]
gi|195657423|gb|ACG48179.1| hypothetical protein [Zea mays]
Length = 460
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 130/257 (50%), Positives = 163/257 (63%), Gaps = 25/257 (9%)
Query: 247 EDSNSMRSKQDENKSDSSKTKDN----------SKPVEPPKDYIHVRARRGQATDSHSLA 296
E+SN + K+ + DN SKP EPPKDYIH RARRG+ATDSHSLA
Sbjct: 207 EESNGAEENSGKGKAAAQSNSDNGGKKQGKDGASKPPEPPKDYIHFRARRGEATDSHSLA 266
Query: 297 ERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM 356
ERVRREKIS+RMK LQDLVPGCNKV GKAVMLDEIINYVQSLQRQVEFLSMKLATVNP++
Sbjct: 267 ERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQL 326
Query: 357 DL-NMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAEN-QF 414
D N+ LL KD+ QSCG +Q+S +P + S P QG+ L G+ N +N Q
Sbjct: 327 DFNNLPNLLPKDMHQSCGPLQNSHFPLETSGAPLPYL---NQGNPLIGCGLPNGMDNSQS 383
Query: 415 SINALNSSLHRNHNIQLPP-INGHGEVGPRVPSLWDDDLQSLVQMGFNQNQPRSL----- 468
S++ L+ + R + Q P +NG + +V + W DDLQS+V M Q + +
Sbjct: 384 SMHPLDPAFCRPMSSQQHPFLNGVSDAASQVGTFWQDDLQSVVHMDMGQQSQQEMAPTSS 443
Query: 469 ----NGSMATTQMKIEM 481
+GS+ T MK+E+
Sbjct: 444 NSYNDGSLQTVHMKMEL 460
>gi|218201482|gb|EEC83909.1| hypothetical protein OsI_29959 [Oryza sativa Indica Group]
Length = 405
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 144/361 (39%), Positives = 193/361 (53%), Gaps = 34/361 (9%)
Query: 150 ADPGFAERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQI 209
DPGFAERAARLS F + + + + P S+E SS+S+
Sbjct: 50 GDPGFAERAARLSSFNNGGGGVGQRYGGAGAGLFGMP-PPAPGDFAGGGSREASSVSDPA 108
Query: 210 TS------------QTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQD 257
+S ++ + + + P E + + N E +S++ K +
Sbjct: 109 SSAMKDAAANAKKRKSTAAAAAAAKGKGKEPPVGEEKESDGKRCKTGNGEKESSVKPKAE 168
Query: 258 ENKSDSS-----------KTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISE 306
+ SDSS N+KPVEPPKDY+HVRARRGQATDSHSLAERVRRE+IS+
Sbjct: 169 QAGSDSSVEDGSGGGQKQGKGKNAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQ 228
Query: 307 RMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSK 366
RMK LQDLVPGCNKV GKA+MLDEIINYVQSLQRQVEFLSMKLATVNP N+ LL K
Sbjct: 229 RMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLATVNPLDFSNLPTLLQK 288
Query: 367 DLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRN 426
D+FQ+CG S++ + S FP Q + N+ E+Q ++N L+ +L +
Sbjct: 289 DMFQACGPSASSVFSLESSNSAFPFAEQ----GDVFQQFAQNSMESQCTLNQLDLALSQA 344
Query: 427 HN-IQLPPINGHGEVGPRVPSLWDDDLQSLVQMGFNQNQPRS-----LNGSMATTQMKIE 480
N Q +G + + W+DDLQS+ + Q+Q +G + MK+E
Sbjct: 345 TNAAQYAFQDGTAGANLQQRNFWEDDLQSVFHIENGQSQENGVSAPNFHGQLQAGHMKME 404
Query: 481 M 481
Sbjct: 405 F 405
>gi|242082133|ref|XP_002445835.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
gi|241942185|gb|EES15330.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
Length = 397
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 157/388 (40%), Positives = 211/388 (54%), Gaps = 45/388 (11%)
Query: 129 PKLNLSMIR----GSKSSNNLPIPAADPGFAERAARLSCFAGSQMNMNSSVSASDSKKLR 184
P+L+ ++ G + + L DPGFA RAARLS F+ + +S+ L
Sbjct: 20 PRLDFGVLGAADGGGEEEDCLDKFCGDPGFAARAARLSSFSAQRFPGAASLFG-----LP 74
Query: 185 VSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKS--IQRPKAKET--------- 233
+ A S+E SS+S+ S + D+N +KRK+ + K KE+
Sbjct: 75 PPVPAASGGGEFAGSREASSVSDP-ASAMMKDANAKKRKAPPAAKGKGKESSVQAGEQKD 133
Query: 234 PPTSDPKVVAENPEDSNSMRSKQDENKSDSS-----------KTKDNSKPVEPPKDYIHV 282
P T K ++ + ++ K ++ SDSS N+K VEPPKDY+HV
Sbjct: 134 PDTKRCKTEGGEGKEGSPVKPKPEQAGSDSSVEDGGQTQKPPGKGKNAKLVEPPKDYVHV 193
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RARRGQATDSHSLAERVRRE+IS+RMK LQDLVPGCNKV GKA+MLDEIINYVQSLQRQV
Sbjct: 194 RARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQV 253
Query: 343 EFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLT 402
EFLSMKLATVNP N+ LL KD+FQ+CG S++ + S FP +
Sbjct: 254 EFLSMKLATVNPLDFSNLPTLLQKDMFQACGPSASSVFSLESSSSGFPFSDH----GDVF 309
Query: 403 SSGINNNAENQFSINALNSSLHRNHNIQLPPING-HGEVGPRVPSLWDDDLQSLVQMGFN 461
S + N ENQ +N L+ +L Q +G G + S W++DLQS+ + N
Sbjct: 310 QSFVPNGLENQCGLNPLDLALSHATTGQYGFQDGTAGTTNLQQRSYWEEDLQSVFHIDNN 369
Query: 462 -QNQ-------PRSLNGSMATTQMKIEM 481
Q+Q +S +G + MK+E
Sbjct: 370 GQSQENGVSVSAQSFHGQLQEGHMKMEF 397
>gi|356495611|ref|XP_003516668.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 414
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 131/251 (52%), Positives = 166/251 (66%), Gaps = 24/251 (9%)
Query: 243 AENPEDSNSMRSKQDENKSDSSKT-----KDNSKPVEPPKD-YIHVRARRGQATDSHSLA 296
+E ED+ + K D + ++K K S+ +PPK+ YIHVRARRGQAT+SHSLA
Sbjct: 176 SEGAEDNYENQQKGDHQPTSTAKASGKNAKLGSQASDPPKEEYIHVRARRGQATNSHSLA 235
Query: 297 ERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM 356
ERVRREKISERMKFLQDLVPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR+
Sbjct: 236 ERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL 295
Query: 357 DLNMEALLSKDLFQSCGYVQHSL-YPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFS 415
D N+E LL+KD+ Q +L +P D S+ FP + PQ G L I N A
Sbjct: 296 DFNIEGLLAKDILQQRPGPSSALGFPLDMSM-AFPPLHPPQPG--LIHPVIPNMA----- 347
Query: 416 INALNSS--LHRNHNIQLPPINGHGEVGPRVPSLWDDDLQSLVQMGFNQNQP---RSLNG 470
NSS L R + QL P+NG + ++P +W+D+L ++VQM F P + +G
Sbjct: 348 ----NSSDILQRTIHPQLAPLNGGLKEPNQLPDVWEDELHNVVQMSFATTAPLTSQDFDG 403
Query: 471 SMATTQMKIEM 481
+ +QMK+E+
Sbjct: 404 TGPASQMKVEL 414
>gi|115477387|ref|NP_001062289.1| Os08g0524800 [Oryza sativa Japonica Group]
gi|29647487|dbj|BAC75416.1| bHLH transcription factor(GBOF-1)-like [Oryza sativa Japonica
Group]
gi|113624258|dbj|BAF24203.1| Os08g0524800 [Oryza sativa Japonica Group]
Length = 405
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 144/361 (39%), Positives = 193/361 (53%), Gaps = 34/361 (9%)
Query: 150 ADPGFAERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQI 209
DPGFAERAARLS F + + + + P S+E SS+S+
Sbjct: 50 GDPGFAERAARLSSFNNGGGGVGQRYGGAGAGLFGMP-PPAPGDFAGGGSREASSVSDPA 108
Query: 210 TS------------QTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQD 257
+S ++ + + + P E + + N E +S++ K +
Sbjct: 109 SSAMKDAAANAKKRKSTAAAAAAAKGKGKEPPVGEEKESDGKRCKTGNGEKESSVKPKAE 168
Query: 258 ENKSDSS-----------KTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISE 306
+ SDSS N+KPVEPPKDY+HVRARRGQATDSHSLAERVRRE+IS+
Sbjct: 169 QAGSDSSVEDGGGGGQKQGKGKNAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQ 228
Query: 307 RMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSK 366
RMK LQDLVPGCNKV GKA+MLDEIINYVQSLQRQVEFLSMKLATVNP N+ LL K
Sbjct: 229 RMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLATVNPLDFSNLPTLLQK 288
Query: 367 DLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRN 426
D+FQ+CG S++ + S F R+ Q + N+ E+Q ++N L+ +L +
Sbjct: 289 DMFQACGPSASSVFSLESSNSAF--RFAEQ--GDVFQQFAQNSMESQCTLNQLDLALSQA 344
Query: 427 HN-IQLPPINGHGEVGPRVPSLWDDDLQSLVQMGFNQNQPRS-----LNGSMATTQMKIE 480
N Q +G + + W+DDLQS+ + Q+Q +G MK+E
Sbjct: 345 TNAAQYAFQDGTAGANLQQRNFWEDDLQSVFHIENGQSQENGVSAPNFHGQQQAGHMKME 404
Query: 481 M 481
Sbjct: 405 F 405
>gi|359473485|ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
[Vitis vinifera]
Length = 609
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 129/277 (46%), Positives = 172/277 (62%), Gaps = 22/277 (7%)
Query: 220 RKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDEN------KSDSSKTKDNSKPV 273
++++S Q P+ + P+ E +D+ ++ K D+N K+ K ++
Sbjct: 340 KRKRSGQDPEIDQV--KGSPQQPGEASKDNPEIQHKGDQNPSSVPSKNTGKHGKQGAQAS 397
Query: 274 EPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEII 332
+PPK+ YIHVRARRGQAT+SHSLAERVRREKISERMKFLQDLVPGC+KVTGKAVMLDEII
Sbjct: 398 DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 457
Query: 333 NYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQTF-PS 391
NYVQSLQRQVEFLSMKLATVNPR+D N+E +L KD+ + G S F P
Sbjct: 458 NYVQSLQRQVEFLSMKLATVNPRLDFNIEGMLGKDVSEIAXQKILQSRVGPSSTMGFSPE 517
Query: 392 RYQPQQGSHLTSSGINNNAENQFSINALNSS---LHRNHNIQLPPI-NGHGEVGPRVPSL 447
P H + G+ Q + L +S + R N QL + G+ E P++P++
Sbjct: 518 TTMPYPQLHPSQPGL-----IQVGLPGLGNSSDAIRRTINSQLAAMSGGYKESAPQLPNV 572
Query: 448 WDDDLQSLVQMGFNQNQP---RSLNGSMATTQMKIEM 481
W+D+L ++VQMGF+ P + LNGS+ MK E+
Sbjct: 573 WEDELHNVVQMGFSTGAPLNSQDLNGSLPPGHMKAEL 609
>gi|326501104|dbj|BAJ98783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 384
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 164/385 (42%), Positives = 214/385 (55%), Gaps = 53/385 (13%)
Query: 129 PKLNLSMIRGSKSSNN--LPIPAADPGFAERAARLSCFAGSQMNMNSSVSASDSKKLRVS 186
P L+ M+ G+ ++ L DPGFAERAARLS F G + + L
Sbjct: 21 PMLDFGMLDGAVTAGGDCLDKFCGDPGFAERAARLSSFNGQHL----------APGLLGM 70
Query: 187 RSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKS-IQRPKAKETPPTSDPKVVAEN 245
P S+E SS+S+ ++ + D+N +KRK+ + KAKE P S V E+
Sbjct: 71 LPPAP-GGEFGGSREASSVSDPASA--MKDANAKKRKAPASKGKAKE-PSLSTSCQVGEH 126
Query: 246 PE-DSNSMRSKQDENK-------------SDSS-------KTKD-NSKPVEPPKDYIHVR 283
E D+ R+ E K SDSS K K N+KPVEPPKDY+HVR
Sbjct: 127 KEPDAKRCRTGDAEKKAAAPVRPKAEQAGSDSSVEDGEQRKGKGKNAKPVEPPKDYVHVR 186
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
ARRGQATDSHSLAERVRRE+IS+RMKFLQDLVPGCNKV GKA+MLDEIINYVQSLQRQVE
Sbjct: 187 ARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVE 246
Query: 344 FLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTS 403
FLSMKLATVNP N+ LL KD++ G S++ + S FP Q +
Sbjct: 247 FLSMKLATVNPLDFSNLPTLLHKDMY---GPSASSVFSLESSSSAFPFSDQ----GDVFQ 299
Query: 404 SGINNNAENQFSINALNSSLHRNHN-IQLPPINGHGEVG-PRVPSLWDDDLQSLVQMGFN 461
S + N+ E+Q ++N L+ +L + N Q + + + W+DDLQS+ +
Sbjct: 300 SFLPNSMESQCTLNQLDLALSQATNAAQYGFQDATASTNLQQQRNFWEDDLQSVFHVDNR 359
Query: 462 QNQ-----PRSLNGSMATTQMKIEM 481
Q+Q S +G + QMK+E
Sbjct: 360 QSQDNGVSAESFHGDLQAGQMKMEF 384
>gi|326495502|dbj|BAJ85847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 167/424 (39%), Positives = 222/424 (52%), Gaps = 71/424 (16%)
Query: 120 STPLNSPPLPKLNLSMIRGSKS----------------SNNLPIPA-----ADPGFAERA 158
TPL SP KLNLSM+ + N +P+ + ADPGFA+RA
Sbjct: 60 GTPLGSPT--KLNLSMMGQYRHHAHQYPPPQVGGLPTLENLMPMGSLDQFLADPGFAQRA 117
Query: 159 ARLSCF-----AGSQMNMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQT 213
ARLS F G+Q + K+L + + +++ +S + +
Sbjct: 118 ARLSGFDARGGYGAQFGLPDDGPVGALKELELG---SARDDSSVSDPASASAGAGMALKG 174
Query: 214 VTDSNPRKRKSIQRPKAK----ETPPTSDPKVVAENPEDSNSMRSK---QDENKSDSSKT 266
+D N RKRK+ K K TS ++A+ EDS S R K ++ + +S K
Sbjct: 175 ASDGNARKRKAAGGSKGKGKDASVSTTSAKDLLAK--EDSASKRCKSMSMEDGEENSGKG 232
Query: 267 K----------------DNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKF 310
K SK EPPKD+IHVRARRG+ATDSHSLAERVRREKIS+RMK
Sbjct: 233 KAAQSSSENGGKKQGKDGASKLPEPPKDFIHVRARRGEATDSHSLAERVRREKISQRMKL 292
Query: 311 LQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDL-NMEALLSKDLF 369
LQDLVPGCNKV GKAVMLDEIINYVQSLQRQVEFLSMKLATVNP++D N+ LL+KD+
Sbjct: 293 LQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNNLPNLLAKDMQ 352
Query: 370 QSCGYVQH---SLYPGDCSVQTFPSRYQPQQGSHLTSSGINNN--AENQFSINALNSSLH 424
Q S +P + S P Q HL G+++ ++Q +++ L+ +
Sbjct: 353 QQSCGQLQQGSSHFPLEASGAALPYMGQGNN-DHLGGCGMSDGGMGDDQGAMHPLDQAFC 411
Query: 425 RNHNIQLPPINGH--GEVGPRVPSLWDDDLQSLVQMGFNQNQP-----RSLNGSMATTQM 477
R Q H + +V + W DLQS+VQM Q+Q S +GS+ T M
Sbjct: 412 RPMGSQQQQQQQHFLSDAASQVGAFW-QDLQSVVQMDMGQSQEIATSSNSYDGSLQTVHM 470
Query: 478 KIEM 481
K+E+
Sbjct: 471 KMEL 474
>gi|326525931|dbj|BAJ93142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 169/424 (39%), Positives = 223/424 (52%), Gaps = 71/424 (16%)
Query: 120 STPLNSPPLPKLNLSM---------------IRGSKSSNNL-PIPA-----ADPGFAERA 158
TPL SP KLNLSM + G + NL P+ + ADPGFA+RA
Sbjct: 60 GTPLGSPT--KLNLSMMGQYRHHAHQYPPPQVGGLPTLENLMPMDSLDQFLADPGFAQRA 117
Query: 159 ARLSCF-----AGSQMNMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQT 213
ARLS F G+Q + K+L + + +++ +S + +
Sbjct: 118 ARLSGFDARGGYGAQFGLPDDGPVGALKELELG---SARDDSSVSDPASASAGAGMALKG 174
Query: 214 VTDSNPRKRKSIQRPKAK----ETPPTSDPKVVAENPEDSNSMRSK---QDENKSDSSKT 266
+D N RKRK+ K K TS ++A+ EDS S R K ++ + +S K
Sbjct: 175 ASDGNARKRKAAGGSKGKGKDASVSTTSAKDLLAK--EDSASKRCKSMSMEDGEENSGKG 232
Query: 267 K----------------DNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKF 310
K SK EPPKD+IHVRARRG+ATDSHSLAERVRREKIS+RMK
Sbjct: 233 KAAQSSSENGGKKQGKDGASKLPEPPKDFIHVRARRGEATDSHSLAERVRREKISQRMKL 292
Query: 311 LQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDL-NMEALLSKDLF 369
LQDLVPGCNKV GKAVMLDEIINYVQSLQRQVEFLSMKLATVNP++D N+ LL+KD+
Sbjct: 293 LQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNNLPNLLAKDMQ 352
Query: 370 QSCGYVQH---SLYPGDCSVQTFPSRYQPQQGSHLTSSGINNN--AENQFSINALNSSLH 424
Q S +P + S P Q HL G+++ ++Q +++ L+ +
Sbjct: 353 QQSCGQLQQGSSHFPLEASGAALPYMGQGNN-DHLGGCGMSDGGMGDDQGAMHPLDQAFC 411
Query: 425 RNHNIQLPPINGH--GEVGPRVPSLWDDDLQSLVQMGFNQNQP-----RSLNGSMATTQM 477
R Q H + +V + W DLQS+VQM Q+Q S +GS+ T M
Sbjct: 412 RPMGSQQQQQQQHFLSDAASQVGAFW-QDLQSVVQMDMGQSQEIATSSNSYDGSLQTVHM 470
Query: 478 KIEM 481
K+E+
Sbjct: 471 KMEL 474
>gi|356502674|ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 551
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/229 (53%), Positives = 157/229 (68%), Gaps = 17/229 (7%)
Query: 259 NKSDSSKTKDNSKPVEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPG 317
NK+ K S+ +PPK+ YIHVRARRGQAT+SHSLAERVRREKISERMKFLQDLVPG
Sbjct: 334 NKACGKNAKLGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPG 393
Query: 318 CNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQH 377
C+KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR+D N+E LL+KD+ Q
Sbjct: 394 CSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGLLAKDILQQRPDPST 453
Query: 378 SL-YPGDCSVQTFPSRYQPQQG-SHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPIN 435
+L +P D S+ FP + PQ G H + N+++ L R + QL P+N
Sbjct: 454 ALGFPLDMSM-AFPPLHPPQPGLIHPVIPNMTNSSD----------ILQRTIHPQLAPLN 502
Query: 436 GHGEVGPRVPSLWDDDLQSLVQMGFNQNQP---RSLNGSMATTQMKIEM 481
G + ++P +W+D+L ++VQM F P + ++G+ +QMK+E+
Sbjct: 503 GGFKEPNQLPDVWEDELHNVVQMSFATTAPPTSQDVDGTGPASQMKVEL 551
>gi|125564259|gb|EAZ09639.1| hypothetical protein OsI_31923 [Oryza sativa Indica Group]
Length = 366
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 141/302 (46%), Positives = 175/302 (57%), Gaps = 43/302 (14%)
Query: 152 PGFAERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITS 211
PGFAERAARL C G+ + +V + S+EGSS+S+ +
Sbjct: 38 PGFAERAARL-CGGGAGLFGLPAVG---------------NAERGGCSREGSSVSDPAWA 81
Query: 212 QTVTDS--NPRKRKS-----IQRPKAKETPPTSDPKVVAENPE-DSNSMRS----KQDEN 259
N RKRK+ + K S P V E DS ++ K +E
Sbjct: 82 HATGGGGDNARKRKAPASAAAGKDKDAVVGGGSSPCEVGEAKAPDSKKCKAEVNPKVEEA 141
Query: 260 KSDSS---------KTKDNSKPV-EPPKDYIHVRARRGQATDSHSLAERVRREKISERMK 309
SD S K K++SKP EPPKDY+HVRARRGQATDSHSLAERVRREKIS+RMK
Sbjct: 142 ASDGSVGDRVQKQGKGKNSSKPAAEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMK 201
Query: 310 FLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDL-NMEALLSKDL 368
LQDLVPGCNKV GKA+MLDEIINYVQSLQ+QVEFLSMKLATVNP++D N+ LL KD+
Sbjct: 202 VLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFGNLSTLLQKDM 261
Query: 369 FQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHN 428
FQSCG +S++P + + FP Q S G+ ENQ S++ N++L +
Sbjct: 262 FQSCGPSVNSVFPLESAGTAFPF---CDQADFFQSFGL-GAMENQCSLDLANTALPHTGS 317
Query: 429 IQ 430
Q
Sbjct: 318 TQ 319
>gi|115479977|ref|NP_001063582.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|113631815|dbj|BAF25496.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|125606227|gb|EAZ45263.1| hypothetical protein OsJ_29905 [Oryza sativa Japonica Group]
gi|215765178|dbj|BAG86875.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 141/302 (46%), Positives = 175/302 (57%), Gaps = 43/302 (14%)
Query: 152 PGFAERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITS 211
PGFAERAARL C G+ + +V + S+EGSS+S+ +
Sbjct: 38 PGFAERAARL-CGGGAGLFGLPAVG---------------NAERGGCSREGSSVSDPAWA 81
Query: 212 QTVTDS--NPRKRKS-----IQRPKAKETPPTSDPKVVAENPE-DSNSMRS----KQDEN 259
N RKRK+ + K S P V E DS ++ K +E
Sbjct: 82 HATGGGGDNARKRKAPASAAAGKDKDAVVGGGSSPCEVGEAKAPDSKKCKAEVNPKVEEA 141
Query: 260 KSDSS---------KTKDNSKPV-EPPKDYIHVRARRGQATDSHSLAERVRREKISERMK 309
SD S K K++SKP EPPKDY+HVRARRGQATDSHSLAERVRREKIS+RMK
Sbjct: 142 ASDGSVGDRVQKQGKGKNSSKPAAEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMK 201
Query: 310 FLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDL-NMEALLSKDL 368
LQDLVPGCNKV GKA+MLDEIINYVQSLQ+QVEFLSMKLATVNP++D N+ LL KD+
Sbjct: 202 VLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFGNLSTLLQKDM 261
Query: 369 FQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHN 428
FQSCG +S++P + + FP Q S G+ ENQ S++ N++L +
Sbjct: 262 FQSCGPSVNSVFPLESAGTAFPF---CDQADFFQSFGL-GAMENQCSLDLANTALPHTGS 317
Query: 429 IQ 430
Q
Sbjct: 318 TQ 319
>gi|118486023|gb|ABK94855.1| unknown [Populus trichocarpa]
Length = 348
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 127/273 (46%), Positives = 173/273 (63%), Gaps = 14/273 (5%)
Query: 217 SNPRKR--KSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVE 274
SN RKR + + +AK TP +++P + + + +K + K S +
Sbjct: 82 SNKRKRNGQDAELDQAKGTPQSAEPAKGSPETQQKGDQKPTSTTSKDAGKQGKQGSLGSD 141
Query: 275 PPKD-YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
PK+ YIHVRARRGQAT+SHSLAERVRREKISERMKFLQDLVPGC+KVTGKAVMLDEIIN
Sbjct: 142 QPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIIN 201
Query: 334 YVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQ-TFPSR 392
YVQSLQRQVEFLSMKLATVNPR+DLN+E LL+KD+F H++ P + P
Sbjct: 202 YVQSLQRQVEFLSMKLATVNPRLDLNIEGLLAKDVFDPKILQLHAVPPSSLAFSLEMPMA 261
Query: 393 YQPQQGSHLTSSGINNNAENQF-SINALNSSLHRNHNIQLPPINGHGEVGPRVPSLWDDD 451
Y P SH + +G+ A F +N + + R N QL P+ + ++P++WDD+
Sbjct: 262 YPP---SHPSQAGLIPTA---FPGMNNHSDIICRTINSQLTPMTAGFKEPAQLPNVWDDE 315
Query: 452 LQSLVQMGFNQNQP---RSLNGSMATTQMKIEM 481
L+++VQM + + P + +N + +K+E+
Sbjct: 316 LRNVVQMSYETSAPHDSQDVNKPLPPGHLKVEL 348
>gi|323388953|gb|ADX60281.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 405
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 142/361 (39%), Positives = 191/361 (52%), Gaps = 34/361 (9%)
Query: 150 ADPGFAERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQI 209
DP FAERAARLS F + + + + P S+E SS+S+
Sbjct: 50 GDPVFAERAARLSSFNNGGGGVGQRYGGAGAGLFGMP-PPAPGDFAGGGSREASSVSDPA 108
Query: 210 TS------------QTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQD 257
+S ++ + + + P E + + N E +S++ K +
Sbjct: 109 SSAMKDAAANAKKRKSTAAAAAAAKGKGKEPPVGEEKESDGKRCKTGNGEKESSVKPKAE 168
Query: 258 ENKSDSS-----------KTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISE 306
+ SDSS N+KPVEPPKDY+HVRARRGQATDSHSLAERVRRE+IS+
Sbjct: 169 QAGSDSSVEDGGGGGQKQGKGKNAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQ 228
Query: 307 RMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSK 366
RMK LQDLVPGCNKV GKA+MLDEIINYVQSLQRQVEFLSMKLATVNP N+ LL K
Sbjct: 229 RMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLATVNPLDFSNLPTLLQK 288
Query: 367 DLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRN 426
D+ Q+CG S++ + S F R+ Q + N+ E+Q ++N L+ +L +
Sbjct: 289 DMLQACGPSASSVFSLESSNSAF--RFAEQ--GDVFQQFAQNSMESQCTLNQLDLALSQA 344
Query: 427 HN-IQLPPINGHGEVGPRVPSLWDDDLQSLVQMGFNQNQPRS-----LNGSMATTQMKIE 480
N Q +G + + W+DDLQS+ + Q+Q +G MK+E
Sbjct: 345 TNAAQYAFQDGTAGANLQQRNFWEDDLQSVFHIENGQSQENGVSAPNFHGQQQAGHMKME 404
Query: 481 M 481
Sbjct: 405 F 405
>gi|194692938|gb|ACF80553.1| unknown [Zea mays]
gi|414886197|tpg|DAA62211.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 353
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 136/309 (44%), Positives = 172/309 (55%), Gaps = 37/309 (11%)
Query: 199 SKEGSSLSEQITSQTVTDSNPRKRKS--IQRPKAKETPPTS-------DPKVVAENPEDS 249
S EGSS+S+ ++ D N RKRK+ KE P D K DS
Sbjct: 56 SPEGSSVSDPAWARARGDDNVRKRKAPPTGSAGGKEACPGKAAEAKGPDGKRCRVGGSDS 115
Query: 250 NSMRSKQDENKSDSS---------KTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVR 300
++ SD+S K K VEPPKDY+HVRARRGQATDSHSLAERVR
Sbjct: 116 PVKPKVEEVAASDASVELKAQKKGKGKTAKPAVEPPKDYVHVRARRGQATDSHSLAERVR 175
Query: 301 REKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDL-N 359
REKIS+RMKFLQDLVPGCNKV GKA+MLDEIINYVQSLQ+QVEFLSMKLATVNP++D N
Sbjct: 176 REKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSN 235
Query: 360 MEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNA-ENQFSINA 418
+ LL KD++Q CG +S++P + FP Q S G + A E+Q S++
Sbjct: 236 LSTLLHKDMYQPCGPSANSVFPLESDGAAFPF---CDQADLFHSFGSGSAAMEDQCSLSL 292
Query: 419 LNSSLHRNHNIQLPPINGHGEVGPRVPSLWDDDLQSLVQMGFNQNQPR------SLNGSM 472
L+++L N Q + W+D LQ+ + G Q Q + +G +
Sbjct: 293 LDTALPHAANPQF--------AFQKQRDFWEDGLQNALPTGSEQRQEEDGLLVPNFDGQL 344
Query: 473 ATTQMKIEM 481
Q K+E
Sbjct: 345 HADQTKVEF 353
>gi|255547017|ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
gi|223546170|gb|EEF47672.1| conserved hypothetical protein [Ricinus communis]
Length = 566
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/230 (51%), Positives = 152/230 (66%), Gaps = 17/230 (7%)
Query: 259 NKSDSSKTKDNSKPVEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPG 317
NK+ + K S+ +PPK+ YIHVRARRGQAT+SHSLAERVRREKISERMKFLQDLVPG
Sbjct: 347 NKTSGKQGKQGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPG 406
Query: 318 CNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQH 377
C+KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR+D N+E LL+KD+ S
Sbjct: 407 CSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGLLAKDILHSRAVPSS 466
Query: 378 SLYPGDCSVQTFPSRYQPQQGSHLTSS-GINNNAENQFSINALNSSLHRNHNIQLPPING 436
+L + +P Q G S G+ ++++ L R + QL P++G
Sbjct: 467 TLAFSPDMIMAYPPFNTSQPGLIQASFPGMESHSD----------VLRRTISSQLTPLSG 516
Query: 437 HGEVGPRVPSLWDDDLQSLVQMGFN----QNQPRSLNGSM-ATTQMKIEM 481
+ ++P+ WDD+L ++VQMG+ Q+ GS+ A QMK E+
Sbjct: 517 VFKEPTQLPNAWDDELHNVVQMGYGTGTTQDSQDVNAGSLPAAGQMKAEL 566
>gi|414886196|tpg|DAA62210.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 354
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 136/309 (44%), Positives = 172/309 (55%), Gaps = 36/309 (11%)
Query: 199 SKEGSSLSEQITSQTVTDSNPRKRKS--IQRPKAKETPPTS-------DPKVVAENPEDS 249
S EGSS+S+ ++ D N RKRK+ KE P D K DS
Sbjct: 56 SPEGSSVSDPAWARARGDDNVRKRKAPPTGSAGGKEACPGKAAEAKGPDGKRCRVGGSDS 115
Query: 250 NSMRSKQDENKSDSS---------KTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVR 300
++ SD+S K K VEPPKDY+HVRARRGQATDSHSLAERVR
Sbjct: 116 PVKPKVEEVAASDASVELKAQKKGKGKTAKPAVEPPKDYVHVRARRGQATDSHSLAERVR 175
Query: 301 REKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDL-N 359
REKIS+RMKFLQDLVPGCNKV GKA+MLDEIINYVQSLQ+QVEFLSMKLATVNP++D N
Sbjct: 176 REKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSN 235
Query: 360 MEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNA-ENQFSINA 418
+ LL KD++Q CG +S++P + FP Q S G + A E+Q S++
Sbjct: 236 LSTLLHKDMYQPCGPSANSVFPLESDGAAFPF---CDQADLFHSFGSGSAAMEDQCSLSL 292
Query: 419 LNSSLHRNHNIQLPPINGHGEVGPRVPSLWDDDLQSLVQMGFNQNQPR------SLNGSM 472
L+++L N Q + W+D LQ+ + G Q Q + +G +
Sbjct: 293 LDTALPHAANPQF-------AFQKQQRDFWEDGLQNALPTGSEQRQEEDGLLVPNFDGQL 345
Query: 473 ATTQMKIEM 481
Q K+E
Sbjct: 346 HADQTKVEF 354
>gi|326523695|dbj|BAJ93018.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 140/340 (41%), Positives = 191/340 (56%), Gaps = 50/340 (14%)
Query: 49 FEAALSSIVSSPAASNAPTTCSVIIPADGGGDNVMIRELIGRLGSICNSGEVLPQSYIQA 108
F++ALSS+VSSPA+++A A GG D+V I +LIGRLGSICN
Sbjct: 61 FDSALSSLVSSPASASAGGGL-----ARGGEDDVAIGDLIGRLGSICNGA---------- 105
Query: 109 QNNNNSNTCCYSTPLNSPPLPKLNLSMIRGSKSSNNLPIPAADPGFAERAARLSCFAGSQ 168
++N CYSTPL+SPP + RG + I A + G R + G+
Sbjct: 106 ----SANNSCYSTPLSSPP--RGAPQAFRGYGA-----IAALETGRLSRVSSSKSLVGNT 154
Query: 169 MNMNSSVSASDSKKLRVS-RSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQR 227
+ ++ + +L +S + +P + + +K G++ S + + +
Sbjct: 155 SGVAATAPLDQNAQLEMSPETDSPAAMQDPATKRGAAGSARKRKAAPAKGKAKASLPAVQ 214
Query: 228 P----KAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVR 283
P A T P P+V ++ D N+ +E KS EP KDYIHVR
Sbjct: 215 PSCSMAAINTSPPKRPRV-SDGGNDENA--GAVEEEKS------------EPVKDYIHVR 259
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
ARRGQATDSHSLAERVRREKI ERMK LQ LVP CNK+TGKA+MLDEIINYVQSLQRQVE
Sbjct: 260 ARRGQATDSHSLAERVRREKIGERMKLLQSLVPSCNKITGKALMLDEIINYVQSLQRQVE 319
Query: 344 FLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGD 383
FLSMKL+T+NP+++L+ + + SK++ Q + +YP D
Sbjct: 320 FLSMKLSTMNPQLELDEQCIPSKEMNQ----MAVPVYPSD 355
>gi|226498378|ref|NP_001148110.1| BHLH transcription factor [Zea mays]
gi|195615854|gb|ACG29757.1| BHLH transcription factor [Zea mays]
Length = 403
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 144/380 (37%), Positives = 199/380 (52%), Gaps = 46/380 (12%)
Query: 129 PKLNLSMIRGSKSSNNLPIPAADPGFAERAARLSCFAGSQMNMNS---------SVSASD 179
P+L+ G + + L DPGFA RAARLS F+G + + + S ++
Sbjct: 20 PRLDFG---GEEEEDCLDRFCGDPGFAARAARLSSFSGQRFAVTAGLFGLPPPLSAASGG 76
Query: 180 SKKLRVSRSSTPESNNNADSKE----------------GSSLSEQITSQTVTDSNPRKRK 223
+ SR ++ S+ + K+ G S Q + + ++
Sbjct: 77 GGEFAGSREASSVSDPASAMKDANAKKRKAPAAAAKGKGREPSAQAQAGEPKGPDAKRCC 136
Query: 224 SIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSK----TKDNSKPVEPPKDY 279
+ + E P PK PE + S S +D + + K N+KPVEPP+DY
Sbjct: 137 KAEGGEGVEGSPVKLPK-----PEQAGSDSSVEDGGGAQNQKPPPGKGKNAKPVEPPRDY 191
Query: 280 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 339
+HVRARRGQATDSHSLAERVRRE+IS+RMK LQDLVPGCNKV GKA+MLDEIINYVQSLQ
Sbjct: 192 VHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQ 251
Query: 340 RQVEFLSMKLATVNPRMDL-NMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQG 398
RQVEFLSMKLATVNP +DL N+ LL KD+FQ+CG S++ + FP Q
Sbjct: 252 RQVEFLSMKLATVNP-LDLSNLPTLLQKDMFQACGASASSVFSLESCSPGFPFGGQGDVF 310
Query: 399 SHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPINGHGEVGPRVPSLW--DDDLQSLV 456
+G+ N +N L+ +L Q +G + + W ++DLQS+
Sbjct: 311 QSFAPNGLENPCGG---LNPLDLALSHATGGQFGFQDGTAGTNLQQRNYWEEEEDLQSVF 367
Query: 457 QMGFNQNQPRSLNGSMATTQ 476
+ + N +G+ A+ Q
Sbjct: 368 HI--DDNGQSQEHGASASAQ 385
>gi|226497606|ref|NP_001151910.1| BHLH transcription factor [Zea mays]
gi|195650891|gb|ACG44913.1| BHLH transcription factor [Zea mays]
Length = 354
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 136/309 (44%), Positives = 170/309 (55%), Gaps = 36/309 (11%)
Query: 199 SKEGSSLSEQITSQTVTDSNPRKRKS--IQRPKAKETPPTS-------DPKVVAENPEDS 249
S EGSS+S+ ++ D N RKRK KE P D K DS
Sbjct: 56 SPEGSSVSDPAWARARDDDNVRKRKEPPTGSAGGKEACPGKAAEAKGPDGKRCRVGGSDS 115
Query: 250 NSMRSKQDENKSDSS---------KTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVR 300
++ SD+S K K VEPPKDY+HVRARRGQATDSHSLAERVR
Sbjct: 116 PVKPKVEEVAASDASVELKAQKKGKGKTAKPAVEPPKDYVHVRARRGQATDSHSLAERVR 175
Query: 301 REKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDL-N 359
REKIS+RMKFLQDLVPGCNKV GKA+MLDEIINYVQSLQ+QVEFLSMKLATVNP++D N
Sbjct: 176 REKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSN 235
Query: 360 MEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNA-ENQFSINA 418
+ LL KD++Q CG +S++P + FP Q S G + A E+Q S++
Sbjct: 236 LSTLLHKDMYQPCGPSANSVFPLESDGAAFPF---CDQADLFHSFGSGSAAMEDQCSLSL 292
Query: 419 LNSSLHRNHNIQLPPINGHGEVGPRVPSLWDDDLQSLVQMGFNQNQPRS------LNGSM 472
L+++L N Q + W+D LQ+ + G Q Q +G +
Sbjct: 293 LDTALPHAANPQF-------AFQKQQRDFWEDGLQNALPTGSEQRQEEDGLLVPNFDGQL 345
Query: 473 ATTQMKIEM 481
Q K+E
Sbjct: 346 HADQTKVEF 354
>gi|46367684|emb|CAE00874.1| TA1 protein [Oryza sativa Japonica Group]
Length = 204
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 114/204 (55%), Positives = 136/204 (66%), Gaps = 12/204 (5%)
Query: 210 TSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDN 269
TS DS+ ++ KS + A + K N E+ + +D +
Sbjct: 12 TSAAKEDSSGKRCKSTEESNAAAEENSGKGKAAQSNSENGGGKKQGKD----------SS 61
Query: 270 SKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLD 329
SKP EPPKDYIHVRARRG+ATDSHSLAERVRREKIS+RMK LQDLVPGCNKV GKAVMLD
Sbjct: 62 SKPPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLD 121
Query: 330 EIINYVQSLQRQVEFLSMKLATVNPRMDL-NMEALLSKDLFQSCGYVQHSLYPGDCSVQT 388
EIINYVQSLQRQVEFLSMKLATVNP++D N+ LL+KD+ QSC +Q S +P + S
Sbjct: 122 EIINYVQSLQRQVEFLSMKLATVNPQLDFNNLPNLLAKDMHQSCSPLQSSHFPLETSGAP 181
Query: 389 FPSRYQPQQGSHLTSSGINNNAEN 412
P QPQQG+ L G+ N +N
Sbjct: 182 LPYINQPQQGNPL-GCGLTNGMDN 204
>gi|194699354|gb|ACF83761.1| unknown [Zea mays]
Length = 353
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/309 (44%), Positives = 171/309 (55%), Gaps = 37/309 (11%)
Query: 199 SKEGSSLSEQITSQTVTDSNPRKRKS--IQRPKAKETPPTS-------DPKVVAENPEDS 249
S EGSS+S+ ++ D N RKRK+ KE P D K DS
Sbjct: 56 SPEGSSVSDPAWARARGDDNVRKRKAPPTGSAGGKEACPGKAAEAKGPDGKRCRVGGSDS 115
Query: 250 NSMRSKQDENKSDSS---------KTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVR 300
++ SD+S K K VEPPKDY+HVRARRGQATDSHSLAERVR
Sbjct: 116 PVKPKVEEVAASDASVELKAQKKGKGKTAKPAVEPPKDYVHVRARRGQATDSHSLAERVR 175
Query: 301 REKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDL-N 359
REKIS+RMKFLQDLVPGCNKV GKA+MLDEIINYVQSLQ+QVEFLSMKLATVNP++D N
Sbjct: 176 REKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSN 235
Query: 360 MEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNA-ENQFSINA 418
+ LL KD+ Q CG +S++P + FP Q S G + A E+Q S++
Sbjct: 236 LSTLLHKDMHQPCGPSANSVFPLESDGAAFPF---CDQADLFHSFGSGSAAMEDQCSLSL 292
Query: 419 LNSSLHRNHNIQLPPINGHGEVGPRVPSLWDDDLQSLVQMGFNQNQPR------SLNGSM 472
L+++L N Q + W+D LQ+ + G Q Q + +G +
Sbjct: 293 LDTALPHAANPQF--------AFQKQRDFWEDGLQNALPTGSEQRQEEDGLLVPNFDGQL 344
Query: 473 ATTQMKIEM 481
Q K+E
Sbjct: 345 HADQTKVEF 353
>gi|294462520|gb|ADE76806.1| unknown [Picea sitchensis]
Length = 392
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/265 (45%), Positives = 166/265 (62%), Gaps = 36/265 (13%)
Query: 220 RKRKSIQRPKAK--ETPPTSDPKVVAEN------PEDSNSMRSKQDENKSDSSK------ 265
RKR+++ KA+ ++ TS + EN P+ + +M+ + D++KSD+ +
Sbjct: 136 RKRRTLPNDKARFHDSTFTSPSEKNTENESKSKRPKSAEAMK-ENDDSKSDAEQRTHTGR 194
Query: 266 -------TKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC 318
++ ++KP EPPKDYIHVRARRGQATD HSLAERVRREKI ERMK LQDLVPGC
Sbjct: 195 PEVNPRQSEQSAKPPEPPKDYIHVRARRGQATDRHSLAERVRREKIGERMKLLQDLVPGC 254
Query: 319 NKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHS 378
NK+TGKAVM+DEIINYVQSLQ QVEFLSMKL VNP++ NME L++D+
Sbjct: 255 NKITGKAVMVDEIINYVQSLQCQVEFLSMKLEAVNPKLACNMEGFLARDM---------- 304
Query: 379 LYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPINGHG 438
L P + + +P +QP+ + G + E Q NA +L R N P I G G
Sbjct: 305 LEPSFNTAKAYPQFHQPEWLA--MQVGTSCEMEEQCMGNARQVALRRIMNENSPLIEGCG 362
Query: 439 EVGPRVPSLWDDDLQSLVQMGFNQN 463
+ ++ ++WDD+LQ++V++G QN
Sbjct: 363 DA--KISNVWDDELQNVVRLGVGQN 385
>gi|302763871|ref|XP_002965357.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
gi|300167590|gb|EFJ34195.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
Length = 730
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 174/312 (55%), Gaps = 44/312 (14%)
Query: 178 SDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTS 237
+D+ KL V + S + D+ S E + V +S RKR+++ K K+
Sbjct: 251 ADASKLPVVETKVEASVD--DTSGAKSAQETSQASIVKESTGRKRRTLSEDKLKDGSSC- 307
Query: 238 DPKVVAENPEDSNSMRSKQDEN-------------KSDSSK-----------TKDNSKPV 273
V + +D ++ K+ N K+D S K+N+KP
Sbjct: 308 ---VTSSGIKDGEQVKGKRQRNPNAKEESKQHGNGKADRSSSDNSGSTSPKSVKENTKPP 364
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN
Sbjct: 365 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 424
Query: 334 YVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL-FQSCGYVQHSLYPGDCSVQTFPSR 392
YVQSLQRQVEFLSMKLA VNPR++ N+E+LL K++ L P Q++ +
Sbjct: 425 YVQSLQRQVEFLSMKLAAVNPRLEFNVESLLGKEVPHGRASPTNFVLGP-----QSYSQQ 479
Query: 393 YQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPINGHGEVGPRVPSLWDDDL 452
Q S L +G + ++ L R P ++ + + + S+WD +L
Sbjct: 480 LHQAQHSALQLAGFDLR-----TLTGLQEVAMRRG--AFPCLDPYSDPASQTSSVWDGEL 532
Query: 453 QSLVQ-MGFNQN 463
Q++V MGF +N
Sbjct: 533 QNIVHMMGFVEN 544
>gi|449493518|ref|XP_004159328.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 517
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 139/383 (36%), Positives = 194/383 (50%), Gaps = 73/383 (19%)
Query: 150 ADPGFAERAARLSCFAGSQ-----------------------------------MNMNSS 174
AD F ERAARLSCF+G + + S
Sbjct: 155 ADSSFIERAARLSCFSGGNFGGDVGHFNVPDPVGVFSRGMGVIPERWDEIPRNGLGLASG 214
Query: 175 VSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETP 234
+ + S SS P + + + ++++++ + + RKR + +
Sbjct: 215 TGGQSQRNVVNSESSMPRGDGLGEPCTLEATGKELSTKGL-GTRKRKRSGQKTELDQANG 273
Query: 235 PTSDPKVVAENPEDSNSMRSKQDEN------KSDSSKTKDNSKPVEPPKD-YIHVRARRG 287
P V +P+D + K+D+N K K S+P +PPK+ YIHVRARRG
Sbjct: 274 PLQQTTV---SPKDDAETQRKRDQNPNSTANKGTGKHGKQASQPSDPPKEEYIHVRARRG 330
Query: 288 QATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
QAT+SHSLAERVRREKISERMKFLQ+LVPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSM
Sbjct: 331 QATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 390
Query: 348 KLATVNPRMDLNMEALLSKDLFQS-------CGYVQHSLYPGDCSVQTFPSRYQPQQGSH 400
KLATVNPR+D+N++ +++KD+ QS G+ H P P SH
Sbjct: 391 KLATVNPRLDINIDGVVAKDILQSRVGPLSTLGFSSH-----------MPVACPPPHISH 439
Query: 401 LTSSGINNNAENQFSINALNSSLHRNHNIQLPPINGHGEVGPRVPSLWDDDLQSLVQMGF 460
+ F + L N + P +G + ++ ++W+ +LQ+LVQM F
Sbjct: 440 ------HELIPTSFPAIGSSEMLRSTMNSHMTPRSGGFKNPSQIKNVWEGELQNLVQMSF 493
Query: 461 NQNQP---RSLNGSMATTQMKIE 480
P + GS ++ + K+E
Sbjct: 494 GMPTPPNCLEVEGSDSSGRTKVE 516
>gi|212721436|ref|NP_001132323.1| uncharacterized protein LOC100193765 [Zea mays]
gi|194694078|gb|ACF81123.1| unknown [Zea mays]
gi|414869584|tpg|DAA48141.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 404
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 144/376 (38%), Positives = 201/376 (53%), Gaps = 37/376 (9%)
Query: 129 PKLNLSMIRGSKSSNNLPIPAADPGFAERAARLSCFAGSQMNMNSSV--------SASDS 180
P+L+ G + + L DPGFA RAARLS F+G + + + + +AS
Sbjct: 20 PRLDFG---GEEEEDCLDRFCGDPGFAARAARLSSFSGQRFAVTAGLFGLPPPLPAASGG 76
Query: 181 KKLRVSRSSTPESNNNADSKEGSSLSEQIT------------SQTVTDSNPRKRKSIQRP 228
+ SR ++ S+ + K+ ++ + S P+ + +
Sbjct: 77 GEFAGSREASSVSDPASAMKDANAKKRKAPAAAAAKGKGREPSAQAQAGEPKGPDAKRCC 136
Query: 229 KAKETPPTSDPKVVAENPEDSNSMRSKQD---ENKSDSSKTKD-NSKPVEPPKDYIHVRA 284
KA+ V PE + S S +D +N+ K N+KPVEPP+DY+HVRA
Sbjct: 137 KAEGGEGEEGSPVKLPKPEQAGSDSSVEDGGAQNQKPPPPVKGKNAKPVEPPRDYVHVRA 196
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
RRGQATDSHSLAERVRRE+IS+RMK LQDLVPGCNKV GKA+MLDEIINYVQSLQRQVEF
Sbjct: 197 RRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEF 256
Query: 345 LSMKLATVNPRMDL-NMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTS 403
LSMKLATVNP +DL N+ LL KD+FQ+CG S++ + FP Q
Sbjct: 257 LSMKLATVNP-LDLSNLPTLLQKDMFQACGASASSVFSLESCSPGFPFGGQGDVFQSFVP 315
Query: 404 SGINNNAENQFSINALNSSLHRNHNIQLPPINGHGEVGPRVPSLW---DDDLQSLVQMGF 460
+G+ N +N L+ +L + Q +G + + W ++DLQS+ +
Sbjct: 316 NGLENPCGG---LNPLDLALSQATGGQFGFQDGTAGTNLQQRNYWEEEEEDLQSVFHI-- 370
Query: 461 NQNQPRSLNGSMATTQ 476
+ N +G+ A+ Q
Sbjct: 371 DDNGQSQEHGASASAQ 386
>gi|224108619|ref|XP_002314910.1| predicted protein [Populus trichocarpa]
gi|222863950|gb|EEF01081.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 109/212 (51%), Positives = 145/212 (68%), Gaps = 14/212 (6%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
+P ++YIHVRARRGQAT+SHSLAERVRREKISERMKFLQDLVPGC+KVTGKAVMLDEIIN
Sbjct: 361 QPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIIN 420
Query: 334 YVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRY 393
YVQSLQRQVEFLSMKLATVNPR+D N+E LL+KD+ QS SL +P+ +
Sbjct: 421 YVQSLQRQVEFLSMKLATVNPRLDFNIEGLLAKDILQSRAVPPSSLAFSSEMPMAYPALH 480
Query: 394 QPQQGSHLTS-SGINNNAENQFSINALNSSLHRNHNIQLPPINGHGEVGPRVPSLWDDDL 452
Q Q G T+ G+ ++++ + R N QL + + ++P++WDD+L
Sbjct: 481 QSQPGLIPTAFPGMESHSD----------IIRRTINSQLTAMTAGFKEPAQLPNVWDDEL 530
Query: 453 QSLVQMGFNQNQP---RSLNGSMATTQMKIEM 481
++VQM + + P + +N + +K+E+
Sbjct: 531 HNVVQMTYGTSAPQDSQDVNEPLPPGHLKVEL 562
>gi|15221563|ref|NP_177058.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|79590003|ref|NP_849863.2| transcription factor bHLH49 [Arabidopsis thaliana]
gi|75333634|sp|Q9CAA9.1|BH049_ARATH RecName: Full=Transcription factor bHLH49; AltName: Full=Basic
helix-loop-helix protein 49; Short=AtbHLH49; Short=bHLH
49; AltName: Full=Transcription factor EN 82; AltName:
Full=bHLH transcription factor bHLH049
gi|12323211|gb|AAG51583.1|AC011665_4 putative DNA-binding protein [Arabidopsis thaliana]
gi|22135841|gb|AAM91106.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|25090290|gb|AAN72270.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|332196740|gb|AEE34861.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|332196741|gb|AEE34862.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 486
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 126/288 (43%), Positives = 158/288 (54%), Gaps = 59/288 (20%)
Query: 150 ADPGFAERAARLSCFAGSQM---------------------------------------- 169
AD GF ERAAR S F+G
Sbjct: 128 ADSGFIERAARFSLFSGGNFSDMVNQPLGNSEAIGLFLQGGGTMQGQCQSNELNVGEPHN 187
Query: 170 NMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPK 229
+++ +V S + ++ + P S N ++ + S + Q +T +++ RKR + +
Sbjct: 188 DVSVAVKESTVRSSEQAKPNVPGSGNVSEDTQSSGGNGQKGRETSSNTKKRKRNGQKNSE 247
Query: 230 AKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNS------KPVEPPKD-YIHV 282
A ++ + +E D+N + DE +S K NS + +PPKD YIHV
Sbjct: 248 AAQSHRSQQ----SEEEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHV 303
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RARRGQAT+SHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV
Sbjct: 304 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 363
Query: 343 EFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQTFP 390
EFLSMKLATVNP+MD N+E LL+KD Q L G S FP
Sbjct: 364 EFLSMKLATVNPQMDFNLEGLLAKDALQ--------LRAGSSSTTPFP 403
>gi|20127044|gb|AAM10942.1|AF488584_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 486
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 128/288 (44%), Positives = 158/288 (54%), Gaps = 59/288 (20%)
Query: 150 ADPGFAERAARLSCFAGSQMN--MNSSVSASDSKKLRVSRSST----------------- 190
AD GF ERAAR S F+G + +N + S++ L + T
Sbjct: 128 ADSGFIERAARFSLFSGGNFSDMVNQPLGNSEAIGLFLQGGGTMHGQCQSNELNVGEPHN 187
Query: 191 ---------------------PESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPK 229
P S N ++ + S + Q +T +++ RKR + +
Sbjct: 188 DVSVAVKESTVRSSEQAEPNVPGSGNVSEDTQSSGGNGQKGRETSSNTKKRKRNGQKNSE 247
Query: 230 AKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNS------KPVEPPKD-YIHV 282
A ++ + +E D+N + DE +S K NS + +PPKD YIHV
Sbjct: 248 AAQSHRSQQ----SEEEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHV 303
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RARRGQAT+SHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV
Sbjct: 304 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 363
Query: 343 EFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQTFP 390
EFLSMKLATVNP+MD N+E LL+KD Q L G S FP
Sbjct: 364 EFLSMKLATVNPQMDFNLEGLLAKDALQ--------LRAGSSSTTPFP 403
>gi|79320926|ref|NP_001031255.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|227204401|dbj|BAH57052.1| AT1G68920 [Arabidopsis thaliana]
gi|332196742|gb|AEE34863.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 485
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/288 (44%), Positives = 155/288 (53%), Gaps = 60/288 (20%)
Query: 150 ADPGFAERAARLSCFAGSQM---------------------------------------- 169
AD GF ERAAR S F+G
Sbjct: 128 ADSGFIERAARFSLFSGGNFSDMVNQPLGNSEAIGLFLQGGGTMQGQCQSNELNVGEPHN 187
Query: 170 NMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPK 229
+++ +V S + ++ + P S N ++ + S + Q +T +++ RKR
Sbjct: 188 DVSVAVKESTVRSSEQAKPNVPGSGNVSEDTQSSGGNGQKGRETSSNTKKRKRNGQNSEA 247
Query: 230 AKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNS------KPVEPPKD-YIHV 282
A+ S +E D+N + DE +S K NS + +PPKD YIHV
Sbjct: 248 AQ-----SHRSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHV 302
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RARRGQAT+SHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV
Sbjct: 303 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 362
Query: 343 EFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQTFP 390
EFLSMKLATVNP+MD N+E LL+KD Q L G S FP
Sbjct: 363 EFLSMKLATVNPQMDFNLEGLLAKDALQ--------LRAGSSSTTPFP 402
>gi|449434704|ref|XP_004135136.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 561
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 116/252 (46%), Positives = 152/252 (60%), Gaps = 34/252 (13%)
Query: 246 PEDSNSMRSKQDEN------KSDSSKTKDNSKPVEPPKD-YIHVRARRGQATDSHSLAER 298
P+D + K+D+N K K S+P +PPK+ YIHVRARRGQAT+SHSLAER
Sbjct: 326 PKDDAETQRKRDQNPNSTANKGTGKHGKQASQPSDPPKEEYIHVRARRGQATNSHSLAER 385
Query: 299 VRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDL 358
VRREKISERMKFLQ+LVPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR+D+
Sbjct: 386 VRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDI 445
Query: 359 NMEALLSKDLFQS-------CGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAE 411
N++ +++KD+ QS G+ H P P SH +
Sbjct: 446 NIDGVVAKDILQSRVGPLSTLGFSSH-----------MPVACPPPHISH------HELIP 488
Query: 412 NQFSINALNSSLHRNHNIQLPPINGHGEVGPRVPSLWDDDLQSLVQMGFNQNQP---RSL 468
F + L N + P +G + ++ ++W+ +LQ+LVQM F P +
Sbjct: 489 TSFPAIGSSEMLRSTMNSHMTPRSGGFKNPSQIKNVWEGELQNLVQMSFGMPTPPNCLEV 548
Query: 469 NGSMATTQMKIE 480
GS ++ + K+E
Sbjct: 549 EGSDSSGRTKVE 560
>gi|290768004|gb|ADD60710.1| putative TA1 protein [Oryza brachyantha]
Length = 426
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 98/153 (64%), Positives = 117/153 (76%), Gaps = 3/153 (1%)
Query: 244 ENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREK 303
EN E RS KS + KDN+ P ++YIHVRARRGQAT+SHSLAERVRREK
Sbjct: 213 ENDEKDEPKRSSVASGKSSGKQAKDNAG--SPKEEYIHVRARRGQATNSHSLAERVRREK 270
Query: 304 ISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEAL 363
ISERMK+LQDLVPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSMKLA+VNP +D N++ +
Sbjct: 271 ISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIDRI 330
Query: 364 LSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQ 396
LSKD+FQS G + S++ G +P +QP+
Sbjct: 331 LSKDIFQSQGAIASSVF-GFLPGIVYPQLHQPK 362
>gi|290767992|gb|ADD60699.1| putative TA1 protein [Oryza officinalis]
Length = 435
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 109/199 (54%), Positives = 131/199 (65%), Gaps = 12/199 (6%)
Query: 202 GSSLSEQITSQTVTDSNPRKRKS----IQRPKAKETPPTSDPKVVAENPEDSNSMRSKQD 257
G+ E+I V+ S RKR ++ + E T EN ++ RS
Sbjct: 179 GAGHDEEIR---VSCSKKRKRSGQDGGVKHAEGGEQLATVGSAKKNENDDNGEPKRSSVA 235
Query: 258 ENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPG 317
KS +TKDN+ P +DYIHVRARRGQAT+SHSLAERVRREKISERMK+LQDLVPG
Sbjct: 236 SRKSSGKQTKDNAG--SPKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPG 293
Query: 318 CNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQH 377
C+KVTGKAVMLDEIINYVQSLQRQVEFLSMKLA+VNP +D N+E +LSKD+FQS G
Sbjct: 294 CSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIERILSKDIFQSRGTTAS 353
Query: 378 S---LYPGDCSVQTFPSRY 393
S +P + P +Y
Sbjct: 354 SAFGFFPDIVHPRLHPPKY 372
>gi|302790872|ref|XP_002977203.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
gi|300155179|gb|EFJ21812.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
Length = 158
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 90/103 (87%), Positives = 98/103 (95%)
Query: 266 TKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKA 325
K+N+KP EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKA
Sbjct: 42 VKENTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKA 101
Query: 326 VMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
VMLDEIINYVQSLQRQVEFLSMKLA VNPR++ N+E+LL K++
Sbjct: 102 VMLDEIINYVQSLQRQVEFLSMKLAAVNPRLEFNVESLLGKEV 144
>gi|449518045|ref|XP_004166054.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 121/276 (43%), Positives = 164/276 (59%), Gaps = 28/276 (10%)
Query: 202 GSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKS 261
G +++E T R +++ + KE P + + E ++ + K +N S
Sbjct: 259 GGTMTEPSTEGLCFKKRKRGEQNVGLGQVKEAP-----QQINETAKNGAFNQQKGGQNPS 313
Query: 262 DSS------KTKDNSKPVEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKFLQDL 314
++ + K +S+P + PK+ YIHVRARRGQAT+SHSLAERVRREKISERM+ LQDL
Sbjct: 314 STTSKPAGKQGKQDSQPSDAPKEEYIHVRARRGQATNSHSLAERVRREKISERMRLLQDL 373
Query: 315 VPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGY 374
VPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR+D N+E LL+K+ QS
Sbjct: 374 VPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLTKEFIQSKAG 433
Query: 375 VQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSS---LHRNHNIQL 431
+P D P Y PQ SH + + + SS L R N QL
Sbjct: 434 PSLFGFPPD-----MPVPYLPQHSSH--------HGLIPPCLPTMGSSPDLLRRTINSQL 480
Query: 432 PPINGHGEVGPRVPSLWDDDLQSLVQMGFNQNQPRS 467
+ G + ++P+ W+++L ++V M F+ + P S
Sbjct: 481 TSLVGGFKEPVQLPNRWENELHNVVPMNFDVSAPSS 516
>gi|297744394|emb|CBI37656.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 147/367 (40%), Positives = 195/367 (53%), Gaps = 71/367 (19%)
Query: 153 GFAERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQ 212
GF E A L+C +G +MN +S + SS P + A +E S L E+I S
Sbjct: 12 GF-ESAGILNC-SGFEMNHTTSRT-----------SSCPLAAAEAKVRE-SVLPEKIASA 57
Query: 213 TVTDS-NPRKRKSIQRPKAKETPPTSDPKV--VAENPED--------------------S 249
+S RK +Q PK T D ++ AE+ E +
Sbjct: 58 VGRESFKKRKADKVQSPKVVAEEETKDKRIKGCAEDGESKITEANNNKNSTTTTTTTATT 117
Query: 250 NSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMK 309
+ + E +D+SK + KP DYIHVRARRGQATDSHSLAERVRREKISERMK
Sbjct: 118 TTTNNNNRETSADTSKVSEVQKP-----DYIHVRARRGQATDSHSLAERVRREKISERMK 172
Query: 310 FLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLF 369
+LQDLVPGCNK+TGKA MLDEIINYVQSLQRQVEFLSMKLA VNPR+D N++ L+K++F
Sbjct: 173 YLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDNFLAKEVF 232
Query: 370 QSCGYVQHSLYP--GDCSVQTFPS--RYQPQQGSHLTSSGINNNAENQFSINALNSSLHR 425
+C + +P G S T PS Y P Q + + G+ + IN +L R
Sbjct: 233 PACA----ANFPTIGMSSEMTNPSYLHYDPIQ--QVATCGV------EMGINPAEIALRR 280
Query: 426 NHN--IQLPPI---NGHGEVGPRVPSLWDDDLQSLVQMGFNQNQPRS------LNGSMAT 474
+ + +P + ++ P S WD DLQ+L F+Q + S G +
Sbjct: 281 TISAPVSIPDTFLDSCFTQIQP--SSTWDADLQNLYGPEFHQGRLMSFPSQAAFTGPIDA 338
Query: 475 TQMKIEM 481
+ +K+EM
Sbjct: 339 SNLKMEM 345
>gi|225458914|ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
gi|302142156|emb|CBI19359.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 134/310 (43%), Positives = 178/310 (57%), Gaps = 56/310 (18%)
Query: 190 TPESNNNADSKEGSSLSEQITSQTVTDSNP--RKRKSIQRPK--------AKETPPTSDP 239
T +S N A S+EG QI+ D++P ++RKS P+ A P P
Sbjct: 159 TEKSLNGAQSQEG----HQISEGDAVDASPSGKRRKSSFDPRPPLNTSKSADGEQPKGLP 214
Query: 240 KVVAENPEDSNSMRSKQDEN-------KSDSSKTKDNSKPVEPPKD-YIHVRARRGQATD 291
+E ++ + K D+N K + KDNS E PK+ YIHVRARRGQAT+
Sbjct: 215 WENSEFSKEQEEKKLKIDQNMSPNLRGKQPNKHAKDNSSNGEAPKENYIHVRARRGQATN 274
Query: 292 SHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAT 351
SHSLAERVRREKISERM+ LQ+LVPGCNK+TGKAVMLDEIINYVQSLQ+QVEFLSMKLAT
Sbjct: 275 SHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLAT 334
Query: 352 VNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAE 411
VNP +++++E LLSKD+ S G G SV F G ++SS +
Sbjct: 335 VNPELNIDIERLLSKDILNSRG--------GSTSVLGF--------GPGMSSSHPYPHGI 378
Query: 412 NQFSINALNSSLHRNHNIQLPPINGHGEVGPRVPSLWDDDLQSLVQMGFNQNQPRSLNGS 471
+Q ++ + + + H+ Q ++WD +LQSL+QMGF+ N P S N
Sbjct: 379 SQGTLPGIPTP--QFHSTQ---------------AVWDGELQSLLQMGFDSN-PSSNNLG 420
Query: 472 MATTQMKIEM 481
+ K+E+
Sbjct: 421 TNAGRSKLEL 430
>gi|242045042|ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
gi|241923769|gb|EER96913.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
Length = 438
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 123/263 (46%), Positives = 151/263 (57%), Gaps = 31/263 (11%)
Query: 143 NNLPIPAADPGFAERAARLSCF--------------AGSQMNMNSSVSASDSKKLRVSRS 188
+ P+ D GF ERAAR SCF MN++ S S L R
Sbjct: 96 GHFPV---DSGFIERAARASCFGGGGGVMGATAGYGTADHQTMNNAFSGSSEALLDHQRK 152
Query: 189 -----STPESNNNADSKEGSS--LSEQITSQTVTDSNPRKR-----KSIQRPKAKETPPT 236
PE N SS + +S+ +DS R+R Q A +
Sbjct: 153 DGNDKGEPELGRNGHDGVLSSEAAAGDCSSKGTSDSKKRRRPNEVMGGDQVQSANLPADS 212
Query: 237 SDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLA 296
++ V +++ + +S + KS K+ S+ + +DYIHVRARRGQAT+SHSLA
Sbjct: 213 ANESVHSKDKGEESSPATTTGPGKSKGKGAKETSESQK--EDYIHVRARRGQATNSHSLA 270
Query: 297 ERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM 356
ER+RREKISERMK LQDLVPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR+
Sbjct: 271 ERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL 330
Query: 357 DLNMEALLSKDLFQSCGYVQHSL 379
DLN+E LLSKDL + G SL
Sbjct: 331 DLNIEGLLSKDLLRFPGVPSSSL 353
>gi|225428454|ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
Length = 456
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 147/367 (40%), Positives = 195/367 (53%), Gaps = 71/367 (19%)
Query: 153 GFAERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQ 212
GF E A L+C +G +MN +S + SS P + A +E S L E+I S
Sbjct: 123 GF-ESAGILNC-SGFEMNHTTSRT-----------SSCPLAAAEAKVRE-SVLPEKIASA 168
Query: 213 TVTDS-NPRKRKSIQRPKAKETPPTSDPKV--VAENPED--------------------S 249
+S RK +Q PK T D ++ AE+ E +
Sbjct: 169 VGRESFKKRKADKVQSPKVVAEEETKDKRIKGCAEDGESKITEANNNKNSTTTTTTTATT 228
Query: 250 NSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMK 309
+ + E +D+SK + KP DYIHVRARRGQATDSHSLAERVRREKISERMK
Sbjct: 229 TTTNNNNRETSADTSKVSEVQKP-----DYIHVRARRGQATDSHSLAERVRREKISERMK 283
Query: 310 FLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLF 369
+LQDLVPGCNK+TGKA MLDEIINYVQSLQRQVEFLSMKLA VNPR+D N++ L+K++F
Sbjct: 284 YLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDNFLAKEVF 343
Query: 370 QSCGYVQHSLYP--GDCSVQTFPS--RYQPQQGSHLTSSGINNNAENQFSINALNSSLHR 425
+C + +P G S T PS Y P Q + + G+ + IN +L R
Sbjct: 344 PACA----ANFPTIGMSSEMTNPSYLHYDPIQ--QVATCGV------EMGINPAEIALRR 391
Query: 426 NHN--IQLPPI---NGHGEVGPRVPSLWDDDLQSLVQMGFNQNQPRS------LNGSMAT 474
+ + +P + ++ P S WD DLQ+L F+Q + S G +
Sbjct: 392 TISAPVSIPDTFLDSCFTQIQP--SSTWDADLQNLYGPEFHQGRLMSFPSQAAFTGPIDA 449
Query: 475 TQMKIEM 481
+ +K+EM
Sbjct: 450 SNLKMEM 456
>gi|290767965|gb|ADD60674.1| putative TA1 protein [Oryza granulata]
Length = 430
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/224 (50%), Positives = 140/224 (62%), Gaps = 25/224 (11%)
Query: 178 SDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTS 237
S SK+L S PE A EG+ +S + ++++SIQ K
Sbjct: 161 SSSKEL-----SKPECVGGAGRDEGTRVS----------CSKKRKRSIQHGGVKHVEGGE 205
Query: 238 DPKVVA-----ENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDS 292
+A EN E RS KS + KDN+ P ++YIHVRARRGQAT+S
Sbjct: 206 QLATMAAAQKNENDEKYEPKRSSVAPGKSSRKQAKDNAG--SPKEEYIHVRARRGQATNS 263
Query: 293 HSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATV 352
HSLAERVRREKISERMK+LQDLVPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSMKLA+V
Sbjct: 264 HSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASV 323
Query: 353 NPRMDLNMEALLSKDLFQSCGY---VQHSLYPGDCSVQTFPSRY 393
NP +DLN+E++LSKD+FQS G + +P + P +Y
Sbjct: 324 NPTLDLNIESILSKDIFQSRGTTASLAFGFFPDIIPPRLHPPKY 367
>gi|223950211|gb|ACN29189.1| unknown [Zea mays]
gi|414869585|tpg|DAA48142.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 401
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 142/376 (37%), Positives = 198/376 (52%), Gaps = 40/376 (10%)
Query: 129 PKLNLSMIRGSKSSNNLPIPAADPGFAERAARLSCFAGSQMNMNSSV--------SASDS 180
P+L+ G + + L DPGFA RAARLS F+G + + + + +AS
Sbjct: 20 PRLDFG---GEEEEDCLDRFCGDPGFAARAARLSSFSGQRFAVTAGLFGLPPPLPAASGG 76
Query: 181 KKLRVSRSSTPESNNNADSKEGSSLSEQIT------------SQTVTDSNPRKRKSIQRP 228
+ SR ++ S+ + K+ ++ + S P+ + +
Sbjct: 77 GEFAGSREASSVSDPASAMKDANAKKRKAPAAAAAKGKGREPSAQAQAGEPKGPDAKRCC 136
Query: 229 KAKETPPTSDPKVVAENPEDSNSMRSKQD---ENKSDSSKTKD-NSKPVEPPKDYIHVRA 284
KA+ V PE + S S +D +N+ K N+KPVEPP+DY+HVRA
Sbjct: 137 KAEGGEGEEGSPVKLPKPEQAGSDSSVEDGGAQNQKPPPPVKGKNAKPVEPPRDYVHVRA 196
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
RRGQATDSHSLAERVRRE+IS+RMK LQDLVPGCNKV GKA+MLDEIINYVQSLQRQVEF
Sbjct: 197 RRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEF 256
Query: 345 LSMKLATVNPRMDL-NMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTS 403
LSMKLATVNP +DL N+ LL KD +CG S++ + FP Q
Sbjct: 257 LSMKLATVNP-LDLSNLPTLLQKD---ACGASASSVFSLESCSPGFPFGGQGDVFQSFVP 312
Query: 404 SGINNNAENQFSINALNSSLHRNHNIQLPPINGHGEVGPRVPSLW---DDDLQSLVQMGF 460
+G+ N +N L+ +L + Q +G + + W ++DLQS+ +
Sbjct: 313 NGLENPCGG---LNPLDLALSQATGGQFGFQDGTAGTNLQQRNYWEEEEEDLQSVFHI-- 367
Query: 461 NQNQPRSLNGSMATTQ 476
+ N +G+ A+ Q
Sbjct: 368 DDNGQSQEHGASASAQ 383
>gi|449463525|ref|XP_004149484.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/276 (43%), Positives = 163/276 (59%), Gaps = 28/276 (10%)
Query: 202 GSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKS 261
G +++E T R +++ + KE P + + E ++ + K +N S
Sbjct: 259 GGTMTEPSTEGLCFKKRKRGEQNVGLGQVKEAP-----QQINETAKNGAFNQQKGGQNPS 313
Query: 262 DSS------KTKDNSKPVEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKFLQDL 314
++ + K +S+P + PK+ YIHVRARRGQAT+SHSLAERVRREKISERM+ LQDL
Sbjct: 314 STTSKPAGKQGKQDSQPSDAPKEEYIHVRARRGQATNSHSLAERVRREKISERMRLLQDL 373
Query: 315 VPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGY 374
VPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR+D N+E LL+K+ QS
Sbjct: 374 VPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLTKEFIQSKAG 433
Query: 375 VQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSS---LHRNHNIQL 431
+P D P Y PQ SH + + + SS L R N QL
Sbjct: 434 PSLFGFPPD-----MPVPYLPQHSSH--------HGLIPPCLPTMGSSPDLLRRAINSQL 480
Query: 432 PPINGHGEVGPRVPSLWDDDLQSLVQMGFNQNQPRS 467
+ G + ++P+ W ++L ++V M F+ + P S
Sbjct: 481 TSLVGGFKEPVQLPNRWGNELHNVVPMNFDVSAPSS 516
>gi|15222679|ref|NP_173950.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|42571645|ref|NP_973913.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|75308803|sp|Q9C670.1|BH076_ARATH RecName: Full=Transcription factor bHLH76; AltName: Full=Basic
helix-loop-helix protein 76; Short=AtbHLH76; Short=bHLH
76; AltName: Full=Transcription factor EN 83; AltName:
Full=bHLH transcription factor bHLH076
gi|12321176|gb|AAG50678.1|AC079829_11 bHLH transcription factor GBOF-1, putative [Arabidopsis thaliana]
gi|26449804|dbj|BAC42025.1| putative transcription factor bHLH076 [Arabidopsis thaliana]
gi|28950949|gb|AAO63398.1| At1g26260 [Arabidopsis thaliana]
gi|332192546|gb|AEE30667.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|332192547|gb|AEE30668.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 390
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/324 (40%), Positives = 179/324 (55%), Gaps = 35/324 (10%)
Query: 140 KSSNNLPIPA----------ADPGFAERAARLSCFAGSQMNMN---SSVSASDSKKLRVS 186
+ +NN+ IP AD GF ERAA+ S F +M MN SS+ DS L +
Sbjct: 59 RGNNNIDIPLEMGWNMAQFPADSGFIERAAKFSFFGCGEMMMNQQQSSLGVPDSTGLFLQ 118
Query: 187 RSSTPESN--NNADSKEGSSLSEQITSQTVT-DSNPRKRKSIQRPKAKETPP----TSDP 239
+ P + +N + S L ++ + V+ DS K +T +
Sbjct: 119 DTQIPSGSKLDNGPLTDASKLVKERSINNVSEDSQSSGGNGHDDAKCGQTSSKGFSSKKR 178
Query: 240 KVVAENPEDSNSMRSKQDEN-KSDSSKTKDNSKPVEPPKD-YIHVRARRGQATDSHSLAE 297
K + ++ E+ + K +++ S+++KT +P + KD YIH+RARRGQAT+SHSLAE
Sbjct: 179 KRIGKDCEEEEDKKQKDEQSPTSNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAE 238
Query: 298 RVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMD 357
RVRREKISERMKFLQDLVPGC+KVTGKAVMLDEIINYVQSLQ Q+EFLSMKL+ VNP +D
Sbjct: 239 RVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLD 298
Query: 358 LNMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQG--------SHLTSSGINNN 409
N+E+LL+KD QS +P + S+ P Y Q G L S G+
Sbjct: 299 FNLESLLAKDALQSSA----PTFPHNMSMLYPPVSYLSQTGFMQPNISSMSLLSGGLKRQ 354
Query: 410 AENQFSINALNSSLHRNHNIQLPP 433
+ + + N +H NH P
Sbjct: 355 ETHGYESDHHN-LVHMNHETGTAP 377
>gi|219363183|ref|NP_001136483.1| uncharacterized protein LOC100216597 [Zea mays]
gi|194695886|gb|ACF82027.1| unknown [Zea mays]
gi|413920793|gb|AFW60725.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 469
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 148/362 (40%), Positives = 189/362 (52%), Gaps = 52/362 (14%)
Query: 141 SSNNLPI-PAADPGFAERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNADS 199
S ++ P+ P G AERA RLSCF S + S AS LR ++ A +
Sbjct: 109 SCHSTPVAPCVLAGDAERAERLSCFPASGRKL--SRVASSQSLLR------EQAPAPAPA 160
Query: 200 KEGSSLSEQITSQTVTDSNPRKRK----SIQRPKAKETPPTSDPKVVAENPEDSNSMRSK 255
+ ++Q D RKRK S ++ KAKE T+ P+ + +
Sbjct: 161 PSPGAAAKQHAGDGACDGPCRKRKASGTSSKQSKAKEAVTTAPPESRETAETRAKKCKLS 220
Query: 256 QDENKS--------DSSKTKD-NSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISE 306
DE + S K K+ + EPPKDYIHVRARRGQATDSHSLAERVRREKI E
Sbjct: 221 TDEERKPAAGEGWRGSGKGKELVAADAEPPKDYIHVRARRGQATDSHSLAERVRREKIGE 280
Query: 307 RMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNME--ALL 364
RMK LQDLVPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSMKL+TVNPR++L + +
Sbjct: 281 RMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPRLELGADDSFVP 340
Query: 365 SKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGS-----HLTSS---------GINNNA 410
D + C S+ + P+ Y +GS + T+ G+ +
Sbjct: 341 RDDANKMCAAATSSISMAQQPL-PLPAAYHALEGSSPAFCYTTTPPAPGTAARLGVAASD 399
Query: 411 ENQFSINALNSSLHRNH--NIQLPPINGHG------EVGPRVPSLW---DDDLQSLVQMG 459
F + +S+ NH + P+ G ++G R SLW DDDLQSLV MG
Sbjct: 400 AKAFEMAPPSSAATVNHAGTAERRPLEGPADENASPQMGGR--SLWEEGDDDLQSLVLMG 457
Query: 460 FN 461
F
Sbjct: 458 FR 459
>gi|290767978|gb|ADD60686.1| putative TA1 protein [Oryza australiensis]
Length = 436
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/207 (54%), Positives = 131/207 (63%), Gaps = 20/207 (9%)
Query: 178 SDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKS----IQRPKAKET 233
S SK+L S P N A EG+ V+ S RKR ++ + E
Sbjct: 167 SSSKEL-----SMPGRNGGAGHDEGTR---------VSCSKKRKRSGQDDGVKHAEGDEQ 212
Query: 234 PPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSH 293
T EN E RS KS +TKDN+ P ++YIHVRARRGQAT+SH
Sbjct: 213 LATVGSAQKNENDEKGKPKRSSVASGKSSGKQTKDNAG--SPKEEYIHVRARRGQATNSH 270
Query: 294 SLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 353
SLAERVRREKISERMK+LQ+LVPGC KVTGKAVMLDEIINYVQSLQRQVEFLSMKLA+VN
Sbjct: 271 SLAERVRREKISERMKYLQNLVPGCTKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVN 330
Query: 354 PRMDLNMEALLSKDLFQSCGYVQHSLY 380
P +D N+E +LSKD+FQS G S +
Sbjct: 331 PTLDFNIERILSKDIFQSRGSAASSAF 357
>gi|414885894|tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 434
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 124/259 (47%), Positives = 152/259 (58%), Gaps = 33/259 (12%)
Query: 151 DPGFAERAARLSCFAGSQMN--------------MNSSVSASDSKKLRVSRS------ST 190
D GF ERAAR SCF G MNS+ S S L R+
Sbjct: 95 DSGFIERAARASCFGGGGGGGVMAAFGAAADHQPMNSAFSGSSEALLDHQRTKDGSDKGE 154
Query: 191 PESNNNAD----SKEGSSLSEQITSQTVTDSNPRKR----KSIQRPKAKETPPTSDPKVV 242
PE N S E ++ + +S+ +DS R+R + ++ P S + V
Sbjct: 155 PELGRNGHDGVLSSEAAAAGD-CSSKGTSDSKKRRRPNEVMGGDQVQSSNLPADSANESV 213
Query: 243 --AENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVR 300
+ E+S+ + KS ++ S+ + +DYIHVRARRGQAT+SHSLAER+R
Sbjct: 214 HSKDKGEESSLATTTTGPGKSKGKGARETSESQK--EDYIHVRARRGQATNSHSLAERLR 271
Query: 301 REKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNM 360
REKISERMK LQDLVPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR+DLN+
Sbjct: 272 REKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNI 331
Query: 361 EALLSKDLFQSCGYVQHSL 379
E LLSKDL + G SL
Sbjct: 332 EGLLSKDLLRFPGVPSSSL 350
>gi|116787273|gb|ABK24441.1| unknown [Picea sitchensis]
Length = 320
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 126/297 (42%), Positives = 166/297 (55%), Gaps = 44/297 (14%)
Query: 218 NPRKRKSIQRPKAKETPPTSDPKVVAENPE-DSNSMRSKQDEN------------KSDSS 264
N RKRK + PK K S P E E + N K E+ +S+S+
Sbjct: 35 NLRKRKCLSNPKVKVADVHSIPPKTKETDETERNGKHYKVGESTKDKDDLKDKLEESNSA 94
Query: 265 KTK--------DNSKP--VEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDL 314
+T DN+KP V +DYIHVRARRGQATDSHSLAERVRREKISERMK LQDL
Sbjct: 95 ETAESCPKQTVDNAKPSSVSVKQDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 154
Query: 315 VPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNME-ALLSKDLFQ-SC 372
VPGCNKVTGKAVMLDEIINYVQ+LQ QVEFLSMKLA VNP++D N+E L++D+ Q C
Sbjct: 155 VPGCNKVTGKAVMLDEIINYVQALQCQVEFLSMKLAAVNPQLDCNVEGGYLTRDVLQPHC 214
Query: 373 GYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQ-FSINALNSSLHRNHNIQL 431
+ P + + ++ Q H G+ A+ Q +I + + Q
Sbjct: 215 SSISKMFAPDTTAAASQINQLQKTPLQH----GLQCRADRQELAIRGM-------MDTQF 263
Query: 432 PPINGHGE--VGPRVPSLWDDDLQSLVQMGFNQN-----QPRSLNGSMATTQMKIEM 481
+NG+ + ++ WDD+ Q+ V +G +QN + +G + T MK+E+
Sbjct: 264 TCMNGYADPTFQLQMSQGWDDEFQNAVDIGLDQNRSNPLKSHGFHGVLPTGHMKVEL 320
>gi|356508360|ref|XP_003522925.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 398
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 100/164 (60%), Positives = 115/164 (70%), Gaps = 20/164 (12%)
Query: 229 KAKETPPTSDPKVVAENPEDSNSMRSKQDENKS-------------------DSSKTKDN 269
K ++T +PKVVAEN ++ D+ +S D+S +K N
Sbjct: 123 KKRKTDKPHNPKVVAENENKDKRIKVGADDGESKITKCNTINTNTNNKETCTDTSNSKQN 182
Query: 270 SKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLD 329
SK E P DYIHVRARRGQATDSHSLAERVRREKISERM +LQDLVPGCNKVTGKA MLD
Sbjct: 183 SKASEKP-DYIHVRARRGQATDSHSLAERVRREKISERMNYLQDLVPGCNKVTGKAGMLD 241
Query: 330 EIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCG 373
EIINYVQSLQRQVEFLSMKLA VNPR+D +M+ L KD+F +C
Sbjct: 242 EIINYVQSLQRQVEFLSMKLAAVNPRLDFSMDDLFDKDVFPTCA 285
>gi|297838663|ref|XP_002887213.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333054|gb|EFH63472.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 115/268 (42%), Positives = 149/268 (55%), Gaps = 51/268 (19%)
Query: 150 ADPGFAERAARLSCFAGSQM---------------------------------------- 169
AD GF ERAAR S F+G
Sbjct: 128 ADSGFIERAARFSLFSGGNFSDMVNQPLGNPESIGLFLQGGGTMQGQCQCDELNVGEPHN 187
Query: 170 NMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPK 229
+++++V + ++ + P S N ++ + S + + +T +++ RKR +
Sbjct: 188 DVSTAVKDPTVRSCEQAKPNVPGSGNVSEDTQSSGGNGRKGRETSSNTKKRKRNGQVNSE 247
Query: 230 AKETPPTSDPKVVAENPEDSNSMRSKQDE-------NKSDSSKTKDNSKPVEPPKDYIHV 282
A ++ + +E D+N + + E NK++S K + P YIHV
Sbjct: 248 AAQSHRSQQ----SEEEPDNNGDKKRNSEQSPNSPGNKTNSGKRQGKQSSDLPKDGYIHV 303
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RARRGQAT+SHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV
Sbjct: 304 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 363
Query: 343 EFLSMKLATVNPRMDLNMEALLSKDLFQ 370
EFLSMKLATVNP+MD N+E LL+KD Q
Sbjct: 364 EFLSMKLATVNPQMDFNLEGLLAKDALQ 391
>gi|115467562|ref|NP_001057380.1| Os06g0275600 [Oryza sativa Japonica Group]
gi|55295989|dbj|BAD68029.1| putative TA1 protein [Oryza sativa Japonica Group]
gi|113595420|dbj|BAF19294.1| Os06g0275600 [Oryza sativa Japonica Group]
Length = 437
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 114/223 (51%), Positives = 135/223 (60%), Gaps = 23/223 (10%)
Query: 178 SDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKS----IQRPKAKET 233
S SK+L S P N A EG+ V+ S RKR ++ + E
Sbjct: 168 SSSKEL-----SMPGRNGGAGHDEGTR---------VSCSKKRKRSGQDGGVKHAEGGEQ 213
Query: 234 PPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSH 293
T E+ E RS KS + KDN+ P +DYIHVRARRGQAT+SH
Sbjct: 214 LATVGSAQKNEDDEKGEPKRSSVASGKSSGKQIKDNAG--SPKEDYIHVRARRGQATNSH 271
Query: 294 SLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 353
SLAERVRREKISERMK+LQDLVPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSMKLA+VN
Sbjct: 272 SLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVN 331
Query: 354 PRMDLNMEALLSKDLFQSCGYVQHS---LYPGDCSVQTFPSRY 393
P +D N+E +LSKD+FQ G S +P + P +Y
Sbjct: 332 PTLDFNIERILSKDIFQCRGTTASSAFGFFPDIVHPRLHPPKY 374
>gi|323388959|gb|ADX60284.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 437
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 114/223 (51%), Positives = 135/223 (60%), Gaps = 23/223 (10%)
Query: 178 SDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKS----IQRPKAKET 233
S SK+L S P N A EG+ V+ S RKR ++ + E
Sbjct: 168 SSSKEL-----SMPGRNGGAGHDEGTR---------VSCSKKRKRSGQDGGVKHAEGGEQ 213
Query: 234 PPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSH 293
T E+ E RS KS + KDN+ P +DYIHVRARRGQAT+SH
Sbjct: 214 LATVGSAQKNEDDEKGEPERSSVASGKSSGKQIKDNAG--SPKEDYIHVRARRGQATNSH 271
Query: 294 SLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 353
SLAERVRREKISERMK+LQDLVPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSMKLA+VN
Sbjct: 272 SLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVN 331
Query: 354 PRMDLNMEALLSKDLFQSCGYVQHS---LYPGDCSVQTFPSRY 393
P +D N+E +LSKD+FQ G S +P + P +Y
Sbjct: 332 PTLDFNIERILSKDIFQCRGTTASSAFGFFPDIVHPRLHPPKY 374
>gi|357158920|ref|XP_003578282.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 415
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 130/290 (44%), Positives = 158/290 (54%), Gaps = 42/290 (14%)
Query: 135 MIRGSKSSNNLPIPAA-------------DPGFAERAARLSCFAGSQ-------MNMNSS 174
M RG P+P A D GF ERAAR SCFAG +M S+
Sbjct: 73 MSRGHGPGFLGPVPGAFLPPSCLGGHFPVDSGFIERAARSSCFAGPGAFGGGGDQHMGSA 132
Query: 175 VSASDSKKL--RVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPKAKE 232
L R S + PE N + +S+ +DS R+R S +
Sbjct: 133 FGGVSEGYLDHRSSDKAEPEIAGNQGVPSSEAAGGDCSSKG-SDSKKRRRPS----EVMG 187
Query: 233 TPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKD----NSKPVEPPKDYIHVRARRGQ 288
V A++ +S + K +E+ ++ T +K +DYIHVRARRGQ
Sbjct: 188 ADQVQSSNVAADSANESVHSKDKGEESSPATTTTGKSKGKGAKESSEKEDYIHVRARRGQ 247
Query: 289 ATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMK 348
AT+SHSLAER+RREKISERMK LQDLVPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSMK
Sbjct: 248 ATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK 307
Query: 349 LATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPG--DCSVQTFPSRYQPQ 396
LATVNPR+DLN+E LLSKDL + +PG S+ P PQ
Sbjct: 308 LATVNPRLDLNIEGLLSKDLLR---------FPGVSSSSIGFSPEMMHPQ 348
>gi|222635385|gb|EEE65517.1| hypothetical protein OsJ_20959 [Oryza sativa Japonica Group]
Length = 545
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/212 (51%), Positives = 130/212 (61%), Gaps = 18/212 (8%)
Query: 189 STPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKS----IQRPKAKETPPTSDPKVVAE 244
S P N A EG+ V+ S RKR ++ + E T E
Sbjct: 282 SMPGRNGGAGHDEGTR---------VSCSKKRKRSGQDGGVKHAEGGEQLATVGSAQKNE 332
Query: 245 NPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKI 304
+ E RS KS + KDN+ P +DYIHVRARRGQAT+SHSLAERVRREKI
Sbjct: 333 DDEKGEPKRSSVASGKSSGKQIKDNAG--SPKEDYIHVRARRGQATNSHSLAERVRREKI 390
Query: 305 SERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALL 364
SERMK+LQDLVPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSMKLA+VNP +D N+E +L
Sbjct: 391 SERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIERIL 450
Query: 365 SKDLFQSCGYVQHS---LYPGDCSVQTFPSRY 393
SKD+FQ G S +P + P +Y
Sbjct: 451 SKDIFQCRGTTASSAFGFFPDIVHPRLHPPKY 482
>gi|356517054|ref|XP_003527205.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 384
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/271 (44%), Positives = 155/271 (57%), Gaps = 41/271 (15%)
Query: 239 PKVVAENPEDSNSMRSKQDENKSDSSKTK----------------DNSKPVEPPKDYIHV 282
PKVVAEN ++ D+ +S +K+ NSK E P DYIHV
Sbjct: 127 PKVVAENDNKDKRIKFGSDDGESKITKSNTTNTNTNNNKETCAETSNSKASEKP-DYIHV 185
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RARRGQATDSHSLAERVRREKISERMK+LQDLVPGCNKVTGKA MLDEIINYVQSLQRQV
Sbjct: 186 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQV 245
Query: 343 EFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLT 402
EFLSMKLA VNPR+DL+++ L KD+F +C ++ S + P+ Q
Sbjct: 246 EFLSMKLAAVNPRLDLSIDDLFDKDVFSTCATNFPNIGISSTSDISNPAYLQ-------- 297
Query: 403 SSGINNNAENQFSINALNSS---LHRNHN--IQLPPINGHGEVGPRV--PSLWDDDLQSL 455
N+ + FS + L+ S L R + + +P ++ S W+ D Q+L
Sbjct: 298 ----FNSPQQIFSYDGLDPSDMGLRRTISAPVSMPETYLQSSCFTQMLPSSTWEGDFQNL 353
Query: 456 VQMGFNQNQPRS-----LNGSMATTQMKIEM 481
F+Q + S L+G + +K+EM
Sbjct: 354 CNFDFDQARATSFPSQLLSGLVEAGNLKMEM 384
>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]
Length = 408
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 137/350 (39%), Positives = 197/350 (56%), Gaps = 56/350 (16%)
Query: 137 RGSKSSNNLPIPAADPGFAERAARLSCFA-GSQMNMNSSVSASDSKKLRVSRSSTPESNN 195
+G SS++L +D + E + + GS M SS +D ++ S ++N
Sbjct: 72 QGINSSSHLVHYQSDSSYVELVPKFPSYGSGSFSEMVSSFGLTDCGQISNSGCHPNYTSN 131
Query: 196 NADSKE----GSSLSE---QITSQTVTDSNP--RKRKSIQRPKAKETPPTSDPKVVAENP 246
+A + E S+LS+ Q++ + V +P ++RK + P + P + ++ +
Sbjct: 132 SAANNERTITNSALSQEDHQLSEEPVVGVSPDGKRRKRLAEPSSPFDPNKNAEEMHKDPS 191
Query: 247 EDSNSMRSKQDENKSDSSK--------------TKDNSKPVEPPKD-YIHVRARRGQATD 291
+S+ + +QDE KS + + K+NS E PK+ YIHVRARRGQAT+
Sbjct: 192 GNSSDIPKEQDEKKSRTEQNTAANLRGKQAAKQAKENSHSGEAPKENYIHVRARRGQATN 251
Query: 292 SHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAT 351
SHSLAERVRREKISERM+ LQ+LVPGCNK+TGKAVMLDEIINYVQSLQ+QVEFLSMKLAT
Sbjct: 252 SHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLAT 311
Query: 352 VNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAE 411
VNP +++++E +LSKD+ S G G+ ++ P +H S GI
Sbjct: 312 VNPELNIDIERILSKDILHSRG--------GNAAIMGL----SPGINAHPYSHGI----- 354
Query: 412 NQFSINALNSSLHRNHNIQLPPINGHGEVGPRVPSLWDDDLQSLVQMGFN 461
F N + N N Q PP+ P ++ ++DLQ+L QMGF+
Sbjct: 355 --FPPNI---PVIPNTNPQFPPM-------PH--TVLENDLQNLFQMGFD 390
>gi|224105381|ref|XP_002313791.1| predicted protein [Populus trichocarpa]
gi|222850199|gb|EEE87746.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/227 (48%), Positives = 142/227 (62%), Gaps = 12/227 (5%)
Query: 263 SSKTKDNSKPVEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKV 321
+ +KDNSK E K DYIHVRARRGQATDSHSLAERVRREKISERMK+LQDLVPGCNK+
Sbjct: 217 AGNSKDNSKVTEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKI 276
Query: 322 TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYP 381
TGKA MLDEIINYVQSLQRQVEFLSMKLA VNPR+D N + L +++ F +C ++
Sbjct: 277 TGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNFDNLFAREAFPACSVNFPTI-- 334
Query: 382 GDCSVQTFPS--RYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPINGHGE 439
G S T P+ ++ P Q +T G++ + L + +I ++
Sbjct: 335 GMSSDMTNPAYLQFNPAQQQLVTCCGLDMGTDP--PDMGLKRTTSSPESIPETFLDSSCF 392
Query: 440 VGPRVPSLWDDDLQSLVQMGFNQNQPRS-----LNGSMATTQMKIEM 481
P WD DLQ+L + F+Q + S GS+ + +K+EM
Sbjct: 393 TQAHPPPAWDADLQNLYNVAFDQGRQTSFPTQPFTGSIEASNLKMEM 439
>gi|218197962|gb|EEC80389.1| hypothetical protein OsI_22515 [Oryza sativa Indica Group]
Length = 494
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/223 (51%), Positives = 135/223 (60%), Gaps = 23/223 (10%)
Query: 178 SDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKS----IQRPKAKET 233
S SK+L S P N A EG+ V+ S RKR ++ + E
Sbjct: 225 SSSKEL-----SMPGRNGGAGHDEGTR---------VSCSKKRKRSGQDGGVKHAEGGEQ 270
Query: 234 PPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSH 293
T E+ E RS KS + KDN+ P +DYIHVRARRGQAT+SH
Sbjct: 271 LATVGSAQKNEDDEKGEPKRSSVASGKSSGKQIKDNAG--SPKEDYIHVRARRGQATNSH 328
Query: 294 SLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 353
SLAERVRREKISERMK+LQDLVPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSMKLA+VN
Sbjct: 329 SLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVN 388
Query: 354 PRMDLNMEALLSKDLFQSCGYVQHS---LYPGDCSVQTFPSRY 393
P +D N+E +LSKD+FQ G S +P + P +Y
Sbjct: 389 PTLDFNIERILSKDIFQCRGTTASSAFGFFPDIVHPRLHPPKY 431
>gi|357516845|ref|XP_003628711.1| BHLH transcription factor [Medicago truncatula]
gi|355522733|gb|AET03187.1| BHLH transcription factor [Medicago truncatula]
Length = 467
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/300 (41%), Positives = 169/300 (56%), Gaps = 30/300 (10%)
Query: 87 LIGRLGSICNSGEVLPQSYIQAQNNNN----SNTCCYSTP-----LNSPPLPKLNLSMIR 137
+I R G + N E+ PQS Q ++ + C+S +NS +P+ +
Sbjct: 108 MIKRDGVLPNGAEIFPQSLSQFSTDSGFVDAARMSCFSAGSFVDMMNSCGIPQSMALPLH 167
Query: 138 GSKSSNNLPIPAADPGFAERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNA 197
S+S +L +D + R C V + D K + RS + +
Sbjct: 168 VSRSVEHL---GSDGSPIQNDRRSDC----------PVMSQDEGKQVLGRSCNEADGDES 214
Query: 198 DSKEGSSLSEQITSQ-TVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQ 256
+GS + + + + ++ NP+KRK + T ++ +E +D+ R K
Sbjct: 215 SGDDGSQMLDCASGEPSIKGLNPKKRKRNGQ-DGDSDKATGTLELPSETAKDNCESRKKG 273
Query: 257 DENKSDSSKT-----KDNSKPVEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKF 310
+ S ++K K S+ +PP + Y+HVRARRGQAT+SHSLAERVRREKISERMKF
Sbjct: 274 KQQTSSTAKASGKNAKQGSQASDPPNEGYVHVRARRGQATNSHSLAERVRREKISERMKF 333
Query: 311 LQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQ 370
LQDLVPGCNKVTGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP +D NME LL KD+ Q
Sbjct: 334 LQDLVPGCNKVTGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPHVDFNMERLLPKDILQ 393
>gi|218202318|gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indica Group]
Length = 428
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/252 (49%), Positives = 153/252 (60%), Gaps = 28/252 (11%)
Query: 143 NNLPIPAADPGFAERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPES--------- 193
+ P+ D GF ERAAR +CF G M A+D + + + T E
Sbjct: 95 GHFPV---DSGFIERAARSTCFGGGMM-AGGPYGAAD-QAMGDAFGGTAEGLMDHHRNVG 149
Query: 194 NNNADSKEGSSLSEQITSQTVT-DSNPRKRKSIQRPKAKETPPTSDPKVVAEN-PEDS-- 249
N+ A+ G+ E +S+ D + + S +R + E T +V + N P DS
Sbjct: 150 NDKAEEFAGNGHDEVPSSEVAGGDCSSKGSDSKKRRRPNEVMGTD--QVHSSNLPSDSAN 207
Query: 250 NSMRSKQDENKSDSSKT-------KDNSKPVEPPKD-YIHVRARRGQATDSHSLAERVRR 301
S+ SK +S + T K + E K+ YIHVRARRGQAT+SHSLAER+RR
Sbjct: 208 ESVHSKDKGEESSPATTNGGKSKGKGAKETYESQKEEYIHVRARRGQATNSHSLAERLRR 267
Query: 302 EKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNME 361
EKISERMK LQDLVPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR+DLN+E
Sbjct: 268 EKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIE 327
Query: 362 ALLSKDLFQSCG 373
LLSKDL + G
Sbjct: 328 GLLSKDLLRFPG 339
>gi|115479723|ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|50726625|dbj|BAD34345.1| TA1 protein-like [Oryza sativa Japonica Group]
gi|113631688|dbj|BAF25369.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|215768249|dbj|BAH00478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388941|gb|ADX60275.1| bHLH- transcription factor [Oryza sativa Japonica Group]
Length = 428
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/277 (45%), Positives = 158/277 (57%), Gaps = 39/277 (14%)
Query: 143 NNLPIPAADPGFAERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPES--------- 193
+ P+ D GF ERAAR +CF G M A+D + + + T E
Sbjct: 95 GHFPV---DSGFIERAARSTCFGGGMM-AGGPYGAAD-QAMGDAFGGTAEGLMDHHRNVG 149
Query: 194 NNNADSKEGSSLSEQITSQTVT-DSNPRKRKSIQRPKAKETPPTSDPKVVAEN-PEDS-- 249
N+ A+ G+ E +S+ D + + S +R + E T +V + N P DS
Sbjct: 150 NDKAEEFAGNGHDEVPSSEVAGGDCSSKGSDSKKRRRPNEVMGTD--QVHSSNLPSDSAN 207
Query: 250 NSMRSKQDENKSDSSKTKDNSKPVEP--------PKDYIHVRARRGQATDSHSLAERVRR 301
S+ SK +S + T + ++YIHVRARRGQAT+SHSLAER+RR
Sbjct: 208 ESVHSKDKGEESSPATTNGGKSKGKGAKETSESQKEEYIHVRARRGQATNSHSLAERLRR 267
Query: 302 EKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNME 361
EKISERMK LQDLVPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR+DLN+E
Sbjct: 268 EKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIE 327
Query: 362 ALLSKDLFQSCGYVQHSLYPG--DCSVQTFPSRYQPQ 396
LLSKDL + +PG S+ P PQ
Sbjct: 328 GLLSKDLLR---------FPGVPSSSIGFSPEMMHPQ 355
>gi|222641764|gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japonica Group]
Length = 809
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/241 (49%), Positives = 147/241 (60%), Gaps = 25/241 (10%)
Query: 151 DPGFAERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPES---------NNNADSKE 201
D GF ERAAR +CF G M A+D + + + T E N+ A+
Sbjct: 481 DSGFIERAARSTCFGGGMM-AGGPYGAAD-QAMGDAFGGTAEGLMDHHRNVGNDKAEEFA 538
Query: 202 GSSLSEQITSQTVT-DSNPRKRKSIQRPKAKETPPTSDPKVVAEN-PEDS--NSMRSKQD 257
G+ E +S+ D + + S +R + E T +V + N P DS S+ SK
Sbjct: 539 GNGHDEVPSSEVAGGDCSSKGSDSKKRRRPNEVMGTD--QVHSSNLPSDSANESVHSKDK 596
Query: 258 ENKSDSSKTKDNSKPVEP--------PKDYIHVRARRGQATDSHSLAERVRREKISERMK 309
+S + T + ++YIHVRARRGQAT+SHSLAER+RREKISERMK
Sbjct: 597 GEESSPATTNGGKSKGKGAKETSESQKEEYIHVRARRGQATNSHSLAERLRREKISERMK 656
Query: 310 FLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLF 369
LQDLVPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR+DLN+E LLSKDL
Sbjct: 657 LLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIEGLLSKDLL 716
Query: 370 Q 370
+
Sbjct: 717 R 717
>gi|293332515|ref|NP_001169165.1| uncharacterized protein LOC100383015 [Zea mays]
gi|223975273|gb|ACN31824.1| unknown [Zea mays]
Length = 443
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 119/262 (45%), Positives = 147/262 (56%), Gaps = 32/262 (12%)
Query: 149 AADPGFAERAARLSCFAGSQ---------------MNMNSSVSASDS-------KKLRVS 186
A D GF ERAAR SCF+G +N++ S S KK V
Sbjct: 83 AVDSGFIERAARTSCFSGGGGGVMGASAAAFGAAGQTVNNAFSGSSEALLLDHQKKDVVG 142
Query: 187 RSSTPE--SNNNADSKEGSSLSEQITSQTVTDSNPRKR-------KSIQRPKAKETPPTS 237
PE ++ S E + + +S+ +DS R+R +Q +
Sbjct: 143 EKGEPELGRDDGVLSPEAAGGGD-CSSKGTSDSKKRRRPNEVVGSDQVQSANLPSADSAN 201
Query: 238 DPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAE 297
+ + E+S+ + S + P +DYIH+RARRGQAT+SHSLAE
Sbjct: 202 ESVHSMDKGEESSPATTTAGAGPGKSRGKGEKEVPESQKEDYIHIRARRGQATNSHSLAE 261
Query: 298 RVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMD 357
R+RREKISERMK LQDLVPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR+D
Sbjct: 262 RLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLD 321
Query: 358 LNMEALLSKDLFQSCGYVQHSL 379
LN+E LLSKDL + G SL
Sbjct: 322 LNIEGLLSKDLLRFPGAPSSSL 343
>gi|414589749|tpg|DAA40320.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 453
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 119/262 (45%), Positives = 147/262 (56%), Gaps = 32/262 (12%)
Query: 149 AADPGFAERAARLSCFAGSQ---------------MNMNSSVSASDS-------KKLRVS 186
A D GF ERAAR SCF+G +N++ S S KK V
Sbjct: 93 AVDSGFIERAARTSCFSGGGGGVMGASAAAFGAAGQTVNNAFSGSSEALLLDHQKKDVVG 152
Query: 187 RSSTPE--SNNNADSKEGSSLSEQITSQTVTDSNPRKR-------KSIQRPKAKETPPTS 237
PE ++ S E + + +S+ +DS R+R +Q +
Sbjct: 153 EKGEPELGRDDGVLSPEAAGGGD-CSSKGTSDSKKRRRPNEVVGSDQVQSANLPSADSAN 211
Query: 238 DPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAE 297
+ + E+S+ + S + P +DYIH+RARRGQAT+SHSLAE
Sbjct: 212 ESVHSMDKGEESSPATTTAGAGPGKSRGKGEKEVPESQKEDYIHIRARRGQATNSHSLAE 271
Query: 298 RVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMD 357
R+RREKISERMK LQDLVPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR+D
Sbjct: 272 RLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLD 331
Query: 358 LNMEALLSKDLFQSCGYVQHSL 379
LN+E LLSKDL + G SL
Sbjct: 332 LNIEGLLSKDLLRFPGAPSSSL 353
>gi|356545203|ref|XP_003541034.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 402
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 113/237 (47%), Positives = 144/237 (60%), Gaps = 18/237 (7%)
Query: 258 ENKSDSSKTKD--NSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLV 315
E +D+SK + N KP DYIHVRARRGQATDSHSLAERVRREKISERMK+LQDL+
Sbjct: 171 ETSADTSKGSEVQNQKP-----DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLI 225
Query: 316 PGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYV 375
PGCNKV GKA MLDEIINYVQSLQRQVEFLSMKLA VNPR+D N++ L +K++F SC
Sbjct: 226 PGCNKVAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFAKEVFPSCAQS 285
Query: 376 QHSL-YPGDCSVQTFPSRYQPQQGSHLTS--SGINNNAENQFSINALNSSLHRNHNIQLP 432
++ P D S+ PS Q L S G+ N+ L +++ + LP
Sbjct: 286 FPNIGIPSDMSISNNPSYLQFNSAQQLVSCCGGLINSMGISPPNMGLRTNIISTSTVPLP 345
Query: 433 PINGHGEVGPRV--PSLWD-DDLQSLVQMGFNQNQ-----PRSLNGSMATTQMKIEM 481
++ S W+ D QSL + F+Q + P+ G + + +K+EM
Sbjct: 346 ETFLDSSCFAQILPSSNWEGGDFQSLYNVAFDQGRTASFPPQPFTGLVEASNLKMEM 402
>gi|302766193|ref|XP_002966517.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
gi|302801203|ref|XP_002982358.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300149950|gb|EFJ16603.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300165937|gb|EFJ32544.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
Length = 102
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/102 (87%), Positives = 98/102 (96%), Gaps = 1/102 (0%)
Query: 268 DNSKPVEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAV 326
+NSKP EPPK DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC+KVTGKAV
Sbjct: 1 ENSKPPEPPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAV 60
Query: 327 MLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
MLDEIINYVQSLQRQVEFLSMKLA VNPR+D+N++ LL+K++
Sbjct: 61 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDINLDGLLTKEV 102
>gi|356538777|ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 420
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 132/309 (42%), Positives = 175/309 (56%), Gaps = 34/309 (11%)
Query: 195 NNADSKEGSSLSEQITSQTVTDSNPRKRKSI----QRPKAKETPPTSDPKVVAENPEDSN 250
N A +KE + + S+ V S+ ++ K + + ++K T TS+ K N +N
Sbjct: 124 NMASAKENTKKRKPQNSKVVAASDNKQDKRVKASGEEGESKVTEQTSN-KNGKSNANKNN 182
Query: 251 SMRSKQDENKSDSSKTKD--NSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERM 308
+ + E D+SK + N KP +YIHVRARRGQATDSHSLAERVRREKISERM
Sbjct: 183 NRETTSAETSKDNSKGSEVQNQKP-----EYIHVRARRGQATDSHSLAERVRREKISERM 237
Query: 309 KFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
K+LQDLVPGCNKV GKA MLDEIINYVQSLQRQVEFLSMKLA VNPR+D N++ L +K++
Sbjct: 238 KYLQDLVPGCNKVAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNLDELFTKEV 297
Query: 369 FQSCGYVQHSL-YPGDCSVQTFPSRYQPQQGSHLTS--SGINNNAENQFSINALNSSLHR 425
F SC ++ P D S+ PS L S G+ NN I+ N L R
Sbjct: 298 FPSCAQSFPNIGMPLDMSMSNNPSYLPFNSAQQLVSCCGGLINN----MGISPPNMGLRR 353
Query: 426 NHNIQLPPI-------NGHGEVGPRVPSLWD-DDLQSLVQMGFNQNQPRS-----LNGSM 472
N + P+ + ++ P S W+ D QSL + F+Q + S G +
Sbjct: 354 NISTSPVPLPETFLDSSCFTQILPS--SNWEGGDFQSLYNVAFDQGRTASFPSQPFTGLV 411
Query: 473 ATTQMKIEM 481
+ +K+EM
Sbjct: 412 EASNLKMEM 420
>gi|357152259|ref|XP_003576061.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 211
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/201 (53%), Positives = 126/201 (62%), Gaps = 7/201 (3%)
Query: 265 KTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGK 324
K K+ +P KDYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVP CNKVTGK
Sbjct: 15 KGKEKEVAEDPHKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPSCNKVTGK 74
Query: 325 AVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGD- 383
AVMLDEIINYVQSLQRQVEFLSMKL+TVNP+M+ +++ L KD + C + +
Sbjct: 75 AVMLDEIINYVQSLQRQVEFLSMKLSTVNPQMEFDVDNFLPKDDNEPCSLPATAYTAAEG 134
Query: 384 CSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPINGHGEVGPR 443
+ F P+ G F + SL H +P + H E+
Sbjct: 135 ANPAAFCYPPSPEAGKATMQQSALAICSKGFEV----PSLFVTHGT-IPASSSHQELIQN 189
Query: 444 VPSLW-DDDLQSLVQMGFNQN 463
+LW DDDLQS+VQMGF N
Sbjct: 190 ACNLWEDDDLQSVVQMGFRGN 210
>gi|326489817|dbj|BAJ93982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 427
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/272 (44%), Positives = 147/272 (54%), Gaps = 54/272 (19%)
Query: 143 NNLPIPAADPGFAERAARLSCFAGSQ----------------MNMNSSVSAS--DSKKLR 184
+ P+ D GF ERAAR SCF G +M S+ D ++
Sbjct: 86 GHFPV---DSGFIERAARSSCFVGPGAGGGMIGAGAFGGAGDQHMGSAFGEGYLDHRRKD 142
Query: 185 VSRSSTPE-----------------SNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQR 227
+ PE S+ +DSK+ SE + V SN + +
Sbjct: 143 GGDKAEPELAGSGGVPSSEAAGGDCSSKGSDSKKRRRPSEVMGGDQVQSSNVAADSANES 202
Query: 228 PKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRG 287
++K+ S P + RSK K S K +DYIHVRARRG
Sbjct: 203 VQSKDKGEESSPATGT-----TTGGRSKGKGAKEGSEK-----------EDYIHVRARRG 246
Query: 288 QATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
QAT+SHSLAER+RREKISERMK LQDLVPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSM
Sbjct: 247 QATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 306
Query: 348 KLATVNPRMDLNMEALLSKDLFQSCGYVQHSL 379
KLATVNPR+DLN+E LLSKDL + G S+
Sbjct: 307 KLATVNPRLDLNIEGLLSKDLLRFPGVSSSSM 338
>gi|414589882|tpg|DAA40453.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 329
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/223 (50%), Positives = 140/223 (62%), Gaps = 24/223 (10%)
Query: 192 ESNNNADSKEGSSLSEQITSQTVTDSNPRKRKS------------IQRPKAKETPPTSDP 239
E+ S EGSS+S+ ++ N RKRK+ + + + P
Sbjct: 45 EAGCGGGSPEGSSVSDPAWARARDYGNARKRKAPPTGSAGGKEACLSKVAEAKGPDGKRC 104
Query: 240 KVVAEN-----PEDSNSMRSKQD---ENKSDSSKTKDNSKP-VEPPKDYIHVRARRGQAT 290
+VV + P++ + D E K+ +SKP VEPPKDY+HVRARRGQAT
Sbjct: 105 RVVGASDSPVKPKEEEEEAAASDALVEVKAQKKGKGKSSKPAVEPPKDYVHVRARRGQAT 164
Query: 291 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA 350
DSHSLAERVRREKIS+RMKFLQDLVPGCNKV GKA+MLDEIINYVQSLQ+QVEFLSMKLA
Sbjct: 165 DSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLA 224
Query: 351 TVNPRMDL-NMEALLSKDLFQS-CGY-VQHSLYPGDCSVQTFP 390
TVNP +D N+ LL KD++Q CG S++P + + FP
Sbjct: 225 TVNPELDFSNLSTLLHKDMYQQPCGGPSASSVFPLESAGAAFP 267
>gi|193848525|gb|ACF22714.1| putative TA1 protein [Brachypodium distachyon]
Length = 428
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 92/130 (70%), Positives = 104/130 (80%), Gaps = 2/130 (1%)
Query: 244 ENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREK 303
+N E R KS+ +T+DNS P +DYIH+RAR GQAT+SHSLAERVRREK
Sbjct: 227 DNDEKDGPKRPISASRKSNGKQTEDNSD--APKEDYIHIRARSGQATNSHSLAERVRREK 284
Query: 304 ISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEAL 363
ISERMKFLQDLVPGC+KV GKAVMLDEIINYVQSLQRQVEFLSMKL+TVNP +D N+E +
Sbjct: 285 ISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPALDFNIERI 344
Query: 364 LSKDLFQSCG 373
LSKD FQS G
Sbjct: 345 LSKDFFQSQG 354
>gi|357124540|ref|XP_003563957.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 441
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 92/130 (70%), Positives = 104/130 (80%), Gaps = 2/130 (1%)
Query: 244 ENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREK 303
+N E R KS+ +T+DNS P +DYIH+RAR GQAT+SHSLAERVRREK
Sbjct: 227 DNDEKDGPKRPISASRKSNGKQTEDNSD--APKEDYIHIRARSGQATNSHSLAERVRREK 284
Query: 304 ISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEAL 363
ISERMKFLQDLVPGC+KV GKAVMLDEIINYVQSLQRQVEFLSMKL+TVNP +D N+E +
Sbjct: 285 ISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPALDFNIERI 344
Query: 364 LSKDLFQSCG 373
LSKD FQS G
Sbjct: 345 LSKDFFQSQG 354
>gi|293332473|ref|NP_001169219.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975629|gb|ACN32002.1| unknown [Zea mays]
gi|414589883|tpg|DAA40454.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 112/223 (50%), Positives = 140/223 (62%), Gaps = 24/223 (10%)
Query: 192 ESNNNADSKEGSSLSEQITSQTVTDSNPRKRKS------------IQRPKAKETPPTSDP 239
E+ S EGSS+S+ ++ N RKRK+ + + + P
Sbjct: 45 EAGCGGGSPEGSSVSDPAWARARDYGNARKRKAPPTGSAGGKEACLSKVAEAKGPDGKRC 104
Query: 240 KVVAEN-----PEDSNSMRSKQD---ENKSDSSKTKDNSKP-VEPPKDYIHVRARRGQAT 290
+VV + P++ + D E K+ +SKP VEPPKDY+HVRARRGQAT
Sbjct: 105 RVVGASDSPVKPKEEEEEAAASDALVEVKAQKKGKGKSSKPAVEPPKDYVHVRARRGQAT 164
Query: 291 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA 350
DSHSLAERVRREKIS+RMKFLQDLVPGCNKV GKA+MLDEIINYVQSLQ+QVEFLSMKLA
Sbjct: 165 DSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLA 224
Query: 351 TVNPRMDL-NMEALLSKDLFQS-CGY-VQHSLYPGDCSVQTFP 390
TVNP +D N+ LL KD++Q CG S++P + + FP
Sbjct: 225 TVNPELDFSNLSTLLHKDMYQQPCGGPSASSVFPLESAGAAFP 267
>gi|449533331|ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 456
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 117/244 (47%), Positives = 141/244 (57%), Gaps = 39/244 (15%)
Query: 261 SDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNK 320
+D+SK + V+ P DYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNK
Sbjct: 229 ADTSKENSKASEVQKP-DYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNK 287
Query: 321 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLF-QSCGYVQHSL 379
+TGKA MLDEIINYVQSLQRQVEFLSMKLA VNPR+D N++ L +K++F SC
Sbjct: 288 ITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDDLFNKEVFPPSCTAANFPS 347
Query: 380 YPGDCSVQTFPSRY-------QPQQGSHLTSSGINN---------NAENQFSINALNSSL 423
G S T PS Y Q GIN +A F N L+SS
Sbjct: 348 VGGMSSEMTDPSSYLQFNPNNQQMDSCCGLEMGINTSHVALRRTISAPVSFPENFLDSSC 407
Query: 424 HRNHNIQLPPINGHGEVGPRVPSLWDDDLQSLVQMGFNQNQPRS------LNGSMATTQM 477
Q P +G WD DLQ++ +GF+Q + + GS+ +
Sbjct: 408 L----TQFQPSSG-----------WDVDLQNMYNVGFDQGRSSNAFSSHPYTGSIEAGNI 452
Query: 478 KIEM 481
K+EM
Sbjct: 453 KMEM 456
>gi|357159196|ref|XP_003578371.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 372
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 109/233 (46%), Positives = 144/233 (61%), Gaps = 25/233 (10%)
Query: 227 RPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARR 286
+PK +ET SD E KQ + KS SK D+ EPP+DY+HVRARR
Sbjct: 135 KPKVEET--ASDGSAGGERGR-------KQAKGKSSKSKQADD----EPPRDYVHVRARR 181
Query: 287 GQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 346
GQATDSHSLAERVRREKI+ +MK LQDLVPGCNKV GKA+MLDEIINYVQSLQ+QVEFLS
Sbjct: 182 GQATDSHSLAERVRREKITIKMKMLQDLVPGCNKVIGKALMLDEIINYVQSLQQQVEFLS 241
Query: 347 MKLATVNPRMDLN-MEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSG 405
MKLATVNP++D + + LL KD+ ++ G S++P + + FP Q + + S
Sbjct: 242 MKLATVNPQLDFSTLSTLLHKDMNEAFGPSPSSVFPLESAGGAFPFYEQ----ADIFQSF 297
Query: 406 INNNAENQFSINALNSSLHRNHNIQLPPINGHGEVGPRVPSLWDDDLQSLVQM 458
+ + ENQ + L++ L N Q + + WD++LQ+ + +
Sbjct: 298 GSGSMENQCPLGLLDTVLPHASNPQYA-------FHKQQQNFWDENLQNALHI 343
>gi|255646074|gb|ACU23524.1| unknown [Glycine max]
Length = 402
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 112/237 (47%), Positives = 143/237 (60%), Gaps = 18/237 (7%)
Query: 258 ENKSDSSKTKD--NSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLV 315
E +D+SK + N KP DYIHVRARRGQATDSHSLAERVRREKISERMK+LQDL+
Sbjct: 171 ETSADTSKGSEVQNQKP-----DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLI 225
Query: 316 PGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYV 375
PGCNKV GKA MLDEIINYVQSLQRQVEFLSMKLA VNP +D N++ L +K++F SC
Sbjct: 226 PGCNKVAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPGLDFNIDELFAKEVFPSCAQS 285
Query: 376 QHSL-YPGDCSVQTFPSRYQPQQGSHLTS--SGINNNAENQFSINALNSSLHRNHNIQLP 432
++ P D S+ PS Q L S G+ N+ L +++ + LP
Sbjct: 286 FPNIGIPSDMSISNNPSYLQFNSAQQLVSCCGGLINSMGISPPNMGLRTNIISTSTVPLP 345
Query: 433 PINGHGEVGPRV--PSLWD-DDLQSLVQMGFNQNQ-----PRSLNGSMATTQMKIEM 481
++ S W+ D QSL + F+Q + P+ G + + +K+EM
Sbjct: 346 ETFLDSSCFAQILPSSNWEGGDFQSLYNVAFDQGRTASFPPQPFTGLVEASNLKMEM 402
>gi|326521466|dbj|BAK00309.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 440
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 107/200 (53%), Positives = 127/200 (63%), Gaps = 36/200 (18%)
Query: 189 STPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKV--VAENP 246
S PE + A EG S+S P+KRK P+ D V V E
Sbjct: 178 SKPECSGGAGQDEGPSVS-----------CPKKRKR----------PSQDRGVKNVQEGS 216
Query: 247 EDSNSMRSKQDENKSDS--------SKTKDNSKPVE-----PPKDYIHVRARRGQATDSH 293
+ ++ +KQ+++ D + K N K E P +DYIH+RAR GQAT+SH
Sbjct: 217 QQLATLAAKQEKDDGDKDEPKRPIVTSRKSNGKQTEDKSDAPKEDYIHIRARSGQATNSH 276
Query: 294 SLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 353
SLAERVRREKISERMKFLQDLVPGC+KV GKAVMLDEIINYVQSLQRQVEFLSMKL+ VN
Sbjct: 277 SLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFLSMKLSAVN 336
Query: 354 PRMDLNMEALLSKDLFQSCG 373
P +D N+E +LSKDLFQS G
Sbjct: 337 PALDFNIERILSKDLFQSQG 356
>gi|62701739|gb|AAX92812.1| expressed protein [Oryza sativa Japonica Group]
Length = 507
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 152/456 (33%), Positives = 206/456 (45%), Gaps = 154/456 (33%)
Query: 118 CYSTPLNSP-------PLPKLNLSMIRGSKSSNNLPIPAADPGFAERAARLSCFAGSQMN 170
CYSTP+ SP P+P L + AAD AERAAR+SC A +
Sbjct: 95 CYSTPVGSPCKPAPAPPVPSL---------------LAAADAMIAERAARMSCLAAAGHG 139
Query: 171 MNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKS-IQRPK 229
A+ S+ L ++ ++ + + +GSS +D+ RKRK+ + +
Sbjct: 140 GGKLSRAASSQSL-LAETAAAGGVHQLPASDGSS----------SDAPCRKRKAPCAKAR 188
Query: 230 AKETPPT------------------SDPKVVAENPEDSN-SMRSKQDENKSDSSKTKDNS 270
K+ T + P+ + P+ ++K+ + +D++ +D +
Sbjct: 189 GKDAATTIAKVLRLLSAPPLQSRRRTSPETMVNFPQSPEPGTKAKKCKLSADAAGDED-T 247
Query: 271 KPV-------------------EPPKDYIHVRARRGQATDSHSLAERV------------ 299
KPV EPPKDYIHVRARRGQATDSHSLAERV
Sbjct: 248 KPVAGDAGHGGNGKGKVLDAAGEPPKDYIHVRARRGQATDSHSLAERVKAAGIDAANHNF 307
Query: 300 --------------------RREKISERMKFLQDLVPGCNKV--------------TGKA 325
RREKISERMK LQDLVPGCNKV TGKA
Sbjct: 308 FFSSILAFADAIAAVFHLQVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKA 367
Query: 326 VMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL--------------FQS 371
VMLDEIINYVQSLQRQVEFLSMKL+TVNP++D +++ + KD
Sbjct: 368 VMLDEIINYVQSLQRQVEFLSMKLSTVNPQLDFDVDNFIPKDASDPIMPAPLSLPPPPPP 427
Query: 372 CGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQL 431
Y PG C Y QG+ + S + + + + N +H I +
Sbjct: 428 LSYSPEGASPGIC--------YASSQGTAMQSV-VTSTKHLETAPTFAN-----HHVIPV 473
Query: 432 PPING----HGEVGPRVPSLWDDDLQSLVQMGFNQN 463
P ++G H + G +W+DDLQS+VQMGF N
Sbjct: 474 PSLDGFHSAHSQAG---SCMWEDDLQSVVQMGFRGN 506
>gi|295913599|gb|ADG58045.1| transcription factor [Lycoris longituba]
Length = 229
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/214 (54%), Positives = 137/214 (64%), Gaps = 32/214 (14%)
Query: 216 DSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVE- 274
++ P+KRK I + + P + E N + +KQ + DSS T N+KP
Sbjct: 5 ENGPKKRKRINQDMELGQIQGASPMSIETTNE--NVLDTKQ-KGGQDSS-TMANAKPSGT 60
Query: 275 --------PPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAV 326
+DYIHVRARRGQAT+SHSLAERVRREKISERMKFLQDLVPGC+KVTGKAV
Sbjct: 61 NAKNSTDGAKEDYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAV 120
Query: 327 MLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQ-------SCGYV-QHS 378
MLDEIINYVQSLQRQVEFLSMKLA VNP +D N+E LLSKDL Q + G+ Q
Sbjct: 121 MLDEIINYVQSLQRQVEFLSMKLAAVNPTLDFNIEGLLSKDLLQLRGGSSSAIGFSPQRI 180
Query: 379 LYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAEN 412
L+P Q PS QQG L +GI++ A N
Sbjct: 181 LHP-----QLHPS----QQG--LIQAGISSMAIN 203
>gi|357467301|ref|XP_003603935.1| Transcription factor BEE [Medicago truncatula]
gi|355492983|gb|AES74186.1| Transcription factor BEE [Medicago truncatula]
Length = 398
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/112 (77%), Positives = 100/112 (89%), Gaps = 1/112 (0%)
Query: 262 DSSKTKDNSKPVEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNK 320
D+S +K+NSK + K DYIHVRARRGQATDSHSLAERVRREKISERMK+LQDLVPGCNK
Sbjct: 170 DTSNSKENSKVSDVQKTDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNK 229
Query: 321 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSC 372
+TGKA MLDEIINYVQSLQ+QVEFLSMKLATVNPR+D N++ L K++F +C
Sbjct: 230 ITGKAGMLDEIINYVQSLQKQVEFLSMKLATVNPRLDFNIDDLFEKEVFPNC 281
>gi|388504626|gb|AFK40379.1| unknown [Medicago truncatula]
Length = 397
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/112 (77%), Positives = 100/112 (89%), Gaps = 1/112 (0%)
Query: 262 DSSKTKDNSKPVEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNK 320
D+S +K+NSK + K DYIHVRARRGQATDSHSLAERVRREKISERMK+LQDLVPGCNK
Sbjct: 170 DTSNSKENSKVSDVQKTDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNK 229
Query: 321 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSC 372
+TGKA MLDEIINYVQSLQ+QVEFLSMKLATVNPR+D N++ L K++F +C
Sbjct: 230 ITGKAGMLDEIINYVQSLQKQVEFLSMKLATVNPRLDFNIDDLFEKEVFPNC 281
>gi|108864345|gb|ABA93365.2| expressed protein [Oryza sativa Japonica Group]
Length = 508
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 152/457 (33%), Positives = 206/457 (45%), Gaps = 155/457 (33%)
Query: 118 CYSTPLNSP-------PLPKLNLSMIRGSKSSNNLPIPAADPGFAERAARLSCFAGSQMN 170
CYSTP+ SP P+P L + AAD AERAAR+SC A +
Sbjct: 95 CYSTPVGSPCKPAPAPPVPSL---------------LAAADAMIAERAARMSCLAAAGHG 139
Query: 171 MNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKS-IQRPK 229
A+ S+ L ++ ++ + + +GSS +D+ RKRK+ + +
Sbjct: 140 GGKLSRAASSQSL-LAETAAAGGVHQLPASDGSS----------SDAPCRKRKAPCAKAR 188
Query: 230 AKETPPT------------------SDPKVVAENPEDSN-SMRSKQDENKSDSSKTKDNS 270
K+ T + P+ + P+ ++K+ + +D++ +D +
Sbjct: 189 GKDAATTIAKVLRLLSAPPLQSRRRTSPETMVNFPQSPEPGTKAKKCKLSADAAGDED-T 247
Query: 271 KPV-------------------EPPKDYIHVRARRGQATDSHSLAERV------------ 299
KPV EPPKDYIHVRARRGQATDSHSLAERV
Sbjct: 248 KPVAGDAGHGGNGKGKVLDAAGEPPKDYIHVRARRGQATDSHSLAERVKAAGIDAANHNF 307
Query: 300 --------------------RREKISERMKFLQDLVPGCNKV--------------TGKA 325
RREKISERMK LQDLVPGCNKV TGKA
Sbjct: 308 FFSSILAFADAIAAVFHLQVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKA 367
Query: 326 VMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKD---------------LFQ 370
VMLDEIINYVQSLQRQVEFLSMKL+TVNP++D +++ + KD
Sbjct: 368 VMLDEIINYVQSLQRQVEFLSMKLSTVNPQLDFDVDNFIPKDQASDPIMPAPLSLPPPPP 427
Query: 371 SCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQ 430
Y PG C Y QG+ + S + + + + N +H I
Sbjct: 428 PLSYSPEGASPGIC--------YASSQGTAMQSV-VTSTKHLETAPTFAN-----HHVIP 473
Query: 431 LPPING----HGEVGPRVPSLWDDDLQSLVQMGFNQN 463
+P ++G H + G +W+DDLQS+VQMGF N
Sbjct: 474 VPSLDGFHSAHSQAG---SCMWEDDLQSVVQMGFRGN 507
>gi|356577684|ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 435
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/154 (62%), Positives = 117/154 (75%), Gaps = 8/154 (5%)
Query: 239 PKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKD-YIHVRARRGQATDSHSLAE 297
PKV N D +R KQ ++ K +NS+ E PK+ +IHVRARRGQAT+SHSLAE
Sbjct: 231 PKVEQNNGAD---VRGKQSVKQA---KDNNNSQSGEAPKENFIHVRARRGQATNSHSLAE 284
Query: 298 RVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMD 357
RVRREKISERM+ LQ+LVPGCNK+TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP ++
Sbjct: 285 RVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELN 344
Query: 358 LNMEALLSKDLFQS-CGYVQHSLYPGDCSVQTFP 390
+++ +LSKD+ QS G+ + PG S TFP
Sbjct: 345 FDVDRILSKDILQSRIGHGIGAYGPGINSSHTFP 378
>gi|449461645|ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 523
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 109/219 (49%), Positives = 136/219 (62%), Gaps = 29/219 (13%)
Query: 261 SDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNK 320
+D+SK + V+ P DYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNK
Sbjct: 229 ADTSKENSKASEVQKP-DYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNK 287
Query: 321 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLY 380
+TGKA MLDEIINYVQSLQRQVEFLSMKLA VNPR+D N++ L +K++F
Sbjct: 288 ITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDDLFNKEVF----------- 336
Query: 381 PGDCSVQTFPSRYQPQQGSHLT--SSGINNNAENQ---------FSINALNSSLHRNHN- 428
P C+ FPS S +T SS + N NQ IN + +L R +
Sbjct: 337 PPSCTAANFPS--VGGMSSEMTDPSSYLQFNPNNQQMDSCCGLEMGINTSHVALRRTISA 394
Query: 429 -IQLPP--INGHGEVGPRVPSLWDDDLQSLVQMGFNQNQ 464
+ P ++ + S WD DLQ++ +GF+Q +
Sbjct: 395 PVSFPENFLDSSCLTQFQPSSGWDVDLQNMYNVGFDQGR 433
>gi|255543699|ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
gi|223547923|gb|EEF49415.1| conserved hypothetical protein [Ricinus communis]
Length = 444
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 116/238 (48%), Positives = 146/238 (61%), Gaps = 32/238 (13%)
Query: 266 TKDNSKPVEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGK 324
+KDNSK E K DYIHVRARRGQATDSHSLAERVRREKISERMK+LQDLVPGCNK+TGK
Sbjct: 217 SKDNSKVTEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGK 276
Query: 325 AVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYP--G 382
A MLDEIINYVQSLQRQVEFLSMKLA VNPR+D N++ L++K+ F C + +P G
Sbjct: 277 AGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDNLIAKETFPPC----PTNFPAIG 332
Query: 383 DCSVQTFPSRYQ----------PQQGSHLTSSGINNNAENQFSINALNSSLHRNHN--IQ 430
S T P+ Q QQ +T G++ IN + + R + +
Sbjct: 333 LSSDMTNPAYLQFNPVQQQQQQQQQQQLVTCCGLD------MGINNPDMGIRRTISAPVS 386
Query: 431 LPP--INGHGEVGPRVPSLWDDDLQSLVQMGFNQNQPRS-----LNGSMATTQMKIEM 481
+P I+ + S WD DLQ+L + F+Q + S G++ +K+EM
Sbjct: 387 IPESYIDSSCFNQIQSSSTWDADLQNLYNVAFDQGRSTSFPTQPFTGAIDAGNLKMEM 444
>gi|168059612|ref|XP_001781795.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666702|gb|EDQ53349.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 132/292 (45%), Positives = 167/292 (57%), Gaps = 46/292 (15%)
Query: 214 VTDSNPRKRKS----IQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDN 269
V DS P++ K + + KA+ + +EN DS S R+ ++ N S KD+
Sbjct: 387 VADSQPKRCKGDNDDLVKAKAERSS--------SENSGDSGSPRAHKENNSS-----KDH 433
Query: 270 SKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLD 329
+K +DYIHVRARRGQATDSHSLAERVRREKISERMK+LQDLVPGC+KVTGKAVMLD
Sbjct: 434 AK-----QDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLD 488
Query: 330 EIINYVQSLQRQVEFLSMKLATVNP-----RMDLNMEALLSKDLFQSCGYVQHSLYPGDC 384
EIINYVQSLQRQVE LSMKLA+VNP R+D N E ++KD+ QS + SL G
Sbjct: 489 EIINYVQSLQRQVENLSMKLASVNPGPSSTRIDHNFETTMNKDMLQS--QMSGSL-GGSE 545
Query: 385 SVQTFPSRYQPQQGSHLTSSGINNNAENQFSI--NALNSSLHRNHNIQL---PPINGHGE 439
S TF Q Q +N + F +++ L R+++ + I
Sbjct: 546 STTTFGMMQQHQHQPQPQGHMMNGHCGLDFRAMGTSMDGYLRRSNSAPIRVQSGITSLDS 605
Query: 440 VGPRVPSL--WDDDLQSLV-QMGFNQNQPR-------SLNGSMATTQMKIEM 481
G V WD +LQS+V QMGF+ Q R SL + MK+EM
Sbjct: 606 FGDDVSQSIGWDGELQSIVNQMGFS-FQGRYGSSPLDSLQCQLPVGHMKVEM 656
>gi|224081861|ref|XP_002306505.1| predicted protein [Populus trichocarpa]
gi|222855954|gb|EEE93501.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 134/341 (39%), Positives = 183/341 (53%), Gaps = 67/341 (19%)
Query: 150 ADPGFAERAARLSCFA-GSQMNMNSSVSASDSKKLRVSRSSTP---ESNN-----NADSK 200
+D GF E + F G+ M SV ++ ++ V+ P E+NN A +
Sbjct: 86 SDSGFVELVPKFPGFGSGNFSEMVGSVGLTECGQI-VNAGCPPNYKEANNESTAHGAQRE 144
Query: 201 EGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQ-DEN 259
E LSE+ T + N ++R+ + + P + ++P +S +K+ DE
Sbjct: 145 EDQQLSEETTIGALP--NGKRRRLVAESNSPFDPNKNAEGEFQKDPSGESSDIAKELDEK 202
Query: 260 KSD--------------SSKTKDNSKPVEPPKD-YIHVRARRGQATDSHSLAERVRREKI 304
K + + KDN + E PKD YIHVRARRGQAT+SHSLAERVRREKI
Sbjct: 203 KQKIEQNCSANLRGKQVAKQAKDNPQSGEAPKDDYIHVRARRGQATNSHSLAERVRREKI 262
Query: 305 SERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALL 364
SERM+ LQ+LVPGCNK+TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP + ++E +
Sbjct: 263 SERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELYNDVEKIQ 322
Query: 365 SKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLH 424
SKD+ S G G+ ++ F S GIN+ +Q+S
Sbjct: 323 SKDILHSRG--------GNAAILGF-------------SPGINS---HQYS--------- 349
Query: 425 RNHNIQLPPI----NGHGEVGPRVPSLWDDDLQSLVQMGFN 461
H I P I N + + P ++ D++LQS QMGF+
Sbjct: 350 --HGIFQPGIPVILNSNPQFSPAHHAVLDNELQSFFQMGFD 388
>gi|414589881|tpg|DAA40452.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 107/211 (50%), Positives = 133/211 (63%), Gaps = 22/211 (10%)
Query: 192 ESNNNADSKEGSSLSEQITSQTVTDSNPRKRKS------------IQRPKAKETPPTSDP 239
E+ S EGSS+S+ ++ N RKRK+ + + + P
Sbjct: 45 EAGCGGGSPEGSSVSDPAWARARDYGNARKRKAPPTGSAGGKEACLSKVAEAKGPDGKRC 104
Query: 240 KVVAEN-----PEDSNSMRSKQD---ENKSDSSKTKDNSKP-VEPPKDYIHVRARRGQAT 290
+VV + P++ + D E K+ +SKP VEPPKDY+HVRARRGQAT
Sbjct: 105 RVVGASDSPVKPKEEEEEAAASDALVEVKAQKKGKGKSSKPAVEPPKDYVHVRARRGQAT 164
Query: 291 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA 350
DSHSLAERVRREKIS+RMKFLQDLVPGCNKV GKA+MLDEIINYVQSLQ+QVEFLSMKLA
Sbjct: 165 DSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLA 224
Query: 351 TVNPRMDL-NMEALLSKDLFQSCGYVQHSLY 380
TVNP +D N+ LL KD+ + + +LY
Sbjct: 225 TVNPELDFSNLSTLLHKDVSLTHTSISDALY 255
>gi|125664136|gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
Length = 400
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 114/249 (45%), Positives = 147/249 (59%), Gaps = 43/249 (17%)
Query: 220 RKRKSIQRPKAKETPPTSD----PKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEP 275
RKRK+++ K K+ T D PK E S RS+Q ++ KDNS E
Sbjct: 174 RKRKNVEVEKQKDQ--TRDLAELPKEYDEKKNSGPSSRSRQAVKEA-----KDNSSGAEA 226
Query: 276 PKD-YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINY 334
K+ YIHVRA+RGQAT+SHSLAERVRRE+ISERM+ LQ+LVPGCNK+TGKAVMLDEIINY
Sbjct: 227 SKENYIHVRAKRGQATNSHSLAERVRRERISERMRLLQELVPGCNKITGKAVMLDEIINY 286
Query: 335 VQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQ 394
VQSLQ+QVEFLSMKLATVNP +++++E LLSKD+ S G +L G + P +
Sbjct: 287 VQSLQQQVEFLSMKLATVNPELNVDIERLLSKDILHSRGSNATALGIGPGLSSSHPFQGL 346
Query: 395 PQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPINGHGEVGPRVPSLWDDDLQS 454
PQ LN+ Q P N LW+++LQ+
Sbjct: 347 PQ--------------------GTLNAFPGTAPQFQSLPQN-----------LWNNELQN 375
Query: 455 LVQMGFNQN 463
++Q G++ N
Sbjct: 376 ILQNGYDSN 384
>gi|168063707|ref|XP_001783811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664693|gb|EDQ51403.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 164
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 91/118 (77%), Positives = 99/118 (83%), Gaps = 6/118 (5%)
Query: 258 ENKSDS---SKTKDNSKPVE--PPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQ 312
EN DS S K +SK V+ P +DYIHVRARRGQATDSHSLAERVRREKISERMKFLQ
Sbjct: 44 ENSGDSVGPSSLKASSKSVQNLPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQ 103
Query: 313 DLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQ 370
DLVPGC+KVTGKAVMLDEIINYVQSLQRQ+EFLSMKLA VNPR+D + +L KDL Q
Sbjct: 104 DLVPGCSKVTGKAVMLDEIINYVQSLQRQIEFLSMKLAAVNPRLDYGFD-VLGKDLLQ 160
>gi|226508342|ref|NP_001152551.1| DNA binding protein [Zea mays]
gi|195657419|gb|ACG48177.1| DNA binding protein [Zea mays]
Length = 454
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 144/262 (54%), Gaps = 32/262 (12%)
Query: 149 AADPGFAERAARLSCFAGSQ-----------------MNMNSSVSASDSKKLR------- 184
A D GF ERAAR SCF+G +N++ S S L
Sbjct: 93 AVDSGFIERAARTSCFSGGGGGGGVMGASAAAFGAAGQTVNNAFSGSSGALLEDHQRKDV 152
Query: 185 VSRSSTPESNNN-----ADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDP 239
V PE + ++ G S + TS + P + + ++ P S
Sbjct: 153 VGEKGEPELGRDDGVLSPEAAGGGDCSSKGTSDSKKRRRPNEVVGGDQVQSANLPADSAN 212
Query: 240 KVV--AENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAE 297
+ V + E+S+ + S + P +DYIH+RARRGQAT+SHSLAE
Sbjct: 213 ESVHSMDKGEESSPATTTAGAGPGKSRGKGEKEVPESQKEDYIHIRARRGQATNSHSLAE 272
Query: 298 RVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMD 357
R+RREKISERMK LQDLVPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR+D
Sbjct: 273 RLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLD 332
Query: 358 LNMEALLSKDLFQSCGYVQHSL 379
N+E LLSKDL + G SL
Sbjct: 333 -NIEGLLSKDLLRFPGAPSSSL 353
>gi|414591363|tpg|DAA41934.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 448
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 145/363 (39%), Positives = 183/363 (50%), Gaps = 62/363 (17%)
Query: 118 CYSTPLNSPPLPKLNLSMIRGSKSSNNLPIPAADPGFAERAARLSCFAGSQMNMNSSVSA 177
C+ TP SP SKS+ + A D AERA L CF S + S V +
Sbjct: 127 CHGTPAGSP------------SKSAAPW-VLAGDAAPAERATGLPCFPASCGEL-SRVPS 172
Query: 178 SDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTS 237
S L + + +K+ +S + +D RKRK+ KAK+ T+
Sbjct: 173 CQSSLLGEHAPTPAPAPLPGAAKQHAS------DGSCSDGPCRKRKA-SGGKAKDVVTTA 225
Query: 238 DPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVE----------PPKDYIHVRARRG 287
PK + PE R + D + + N K E PPKDYIHVRARRG
Sbjct: 226 TPK--SREPETMAKRRKLSTDAARDEAGSHGNGKGKEVAPAAEPEPQPPKDYIHVRARRG 283
Query: 288 QATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
QATDSHSLAERVRREKISERMK LQDLVPGC+KVTGKAVMLDEIINYVQSLQ QVEFLSM
Sbjct: 284 QATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVEFLSM 343
Query: 348 KLATVNPRMDLNMEA-LLSKDLFQSCGYVQHSLYPGDCSVQT----FPSRYQPQQGSHLT 402
KL+TV+PR +L++ ++ KD D ++Q P+
Sbjct: 344 KLSTVDPRRELDVGCFVVPKD---------------DVTMQANRLCAPATSSSSSAFCYA 388
Query: 403 SSGINNNAENQFSINALNSSLHRNHNIQL---PPINGHGEVGPRVPSLW-DDDLQSLVQM 458
+ + NA+ + L NH + P + GP+ SLW +DDLQSLV M
Sbjct: 389 ARSVVTNAKGFETPLPLA-----NHGVAADDRPLERRTRDAGPQAGSLWEEDDLQSLVLM 443
Query: 459 GFN 461
GF
Sbjct: 444 GFR 446
>gi|359494803|ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like [Vitis vinifera]
gi|296090643|emb|CBI41042.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 116/276 (42%), Positives = 157/276 (56%), Gaps = 40/276 (14%)
Query: 195 NNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETP--PTSDPKVVAENPEDSNSM 252
NN EG +++ T + RKR + R + + PK +D
Sbjct: 151 NNCAQMEGCQIADDGTMELSPIEKKRKRLADDRSQFAHLKNMEAAQPKDECLGRQDERKQ 210
Query: 253 RSKQ-----DENKSDSSKTKDNSKPVEPPK-DYIHVRARRGQATDSHSLAERVRREKISE 306
+++Q + K ++ K +S+ E PK DYIHVRA+RGQAT+SHSLAERVRRE+ISE
Sbjct: 211 KAEQKIVANNCGKLIGAEVKMSSQTGEAPKEDYIHVRAKRGQATNSHSLAERVRRERISE 270
Query: 307 RMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSK 366
RMKFLQDLVPGCNK+TGKAVMLDEIINYVQSLQRQVEFLSMKLATV P M++ +E +LS
Sbjct: 271 RMKFLQDLVPGCNKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVYPEMNVQIERILSS 330
Query: 367 DLFQSCGYVQHSL--YPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLH 424
D+ S G L PG S P Q ++ A++ ++
Sbjct: 331 DIHHSKGGTAPILGFGPGMNSAYPIP----------------------QVTLQAISPAIE 368
Query: 425 RNHNIQLPPINGHGEVGPRVPSLWDDDLQSLVQMGF 460
+ +Q P++ +P++WD++LQ + QMGF
Sbjct: 369 SS-TLQSSPMS-------PMPNVWDNELQGIKQMGF 396
>gi|219363691|ref|NP_001136513.1| uncharacterized protein LOC100216628 [Zea mays]
gi|194695994|gb|ACF82081.1| unknown [Zea mays]
Length = 314
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/109 (77%), Positives = 95/109 (87%), Gaps = 1/109 (0%)
Query: 273 VEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEII 332
VEPPKDY+HVRARRGQATDSHSLAERVRREKIS+RMKFLQDLVPGCNKV GKA+MLDEII
Sbjct: 149 VEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEII 208
Query: 333 NYVQSLQRQVEFLSMKLATVNPRMDL-NMEALLSKDLFQSCGYVQHSLY 380
NYVQSLQ+QVEFLSMKLATVNP +D N+ LL KD+ + + +LY
Sbjct: 209 NYVQSLQQQVEFLSMKLATVNPELDFSNLSTLLHKDVSLTHTSISDALY 257
>gi|449447083|ref|XP_004141299.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 249
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/206 (51%), Positives = 133/206 (64%), Gaps = 33/206 (16%)
Query: 260 KSDSSKTKD-NSKPVEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPG 317
KS +TK+ +S E PK+ YIHVRARRGQAT+SHSLAERVRREKISERM+ LQ+LVPG
Sbjct: 55 KSTGKQTKEKSSNSAEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPG 114
Query: 318 CNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQH 377
CNK+TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP +++++E +LSKD+F G +
Sbjct: 115 CNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPDVNVDIERILSKDIFNIRGSSGN 174
Query: 378 SLY--PGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPIN 435
L PG +V P F SS+ + Q PP+
Sbjct: 175 VLGFDPGLSAVSPVP-------------------PHRMFQFQGTMSSMP-TTSTQFPPM- 213
Query: 436 GHGEVGPRVPSLWDDDLQSLVQMGFN 461
P+ ++ + DLQSL+QMGF+
Sbjct: 214 ------PQ--TMLESDLQSLLQMGFD 231
>gi|357167346|ref|XP_003581118.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 407
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 122/203 (60%), Gaps = 34/203 (16%)
Query: 257 DENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVP 316
DEN + +K + + EP KDYIHVRARRGQATDSHSLAERVRR++ISERMK LQ LVP
Sbjct: 222 DENAAVPAKVELEEEKPEPVKDYIHVRARRGQATDSHSLAERVRRKRISERMKLLQSLVP 281
Query: 317 GCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQ 376
GCNK+TGKA+MLDEIINYVQSLQRQVEFLSMKL+T+NP++DL+ + SKD+ Q V
Sbjct: 282 GCNKITGKALMLDEIINYVQSLQRQVEFLSMKLSTMNPQLDLDGQYKPSKDMNQ----VT 337
Query: 377 HSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPING 436
Y D F P + S+ ++ E Q + +
Sbjct: 338 MPAYASDEPAGAFSYASSPADSFAMGSAVAHHGLELQGTFS------------------- 378
Query: 437 HGEVGPRVPSLWDDDLQSLVQMG 459
W+ DLQS+VQMG
Sbjct: 379 -----------WEHDLQSMVQMG 390
>gi|449509268|ref|XP_004163540.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 402
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/206 (51%), Positives = 133/206 (64%), Gaps = 33/206 (16%)
Query: 260 KSDSSKTKD-NSKPVEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPG 317
KS +TK+ +S E PK+ YIHVRARRGQAT+SHSLAERVRREKISERM+ LQ+LVPG
Sbjct: 208 KSTGKQTKEKSSNSAEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPG 267
Query: 318 CNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQH 377
CNK+TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP +++++E +LSKD+F G +
Sbjct: 268 CNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPDVNVDIERILSKDIFNIRGSSGN 327
Query: 378 SLY--PGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPIN 435
L PG +V P F SS+ + Q PP+
Sbjct: 328 VLGFDPGLSAVSPVP-------------------PHRMFQFQGTMSSMPTT-STQFPPM- 366
Query: 436 GHGEVGPRVPSLWDDDLQSLVQMGFN 461
P+ ++ + DLQSL+QMGF+
Sbjct: 367 ------PQ--TMLESDLQSLLQMGFD 384
>gi|226492880|ref|NP_001152266.1| BHLH transcription factor [Zea mays]
gi|195654447|gb|ACG46691.1| BHLH transcription factor [Zea mays]
Length = 428
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 145/363 (39%), Positives = 183/363 (50%), Gaps = 62/363 (17%)
Query: 118 CYSTPLNSPPLPKLNLSMIRGSKSSNNLPIPAADPGFAERAARLSCFAGSQMNMNSSVSA 177
C+ TP SP SKS+ + A D AERA L CF S + S V +
Sbjct: 107 CHGTPAGSP------------SKSAAPW-VLAGDAAPAERATGLPCFPASCGEL-SRVPS 152
Query: 178 SDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTS 237
S L + + +K+ +S + +D RKRK+ KAK+ T+
Sbjct: 153 CQSSLLGEHAPTPAPAPLPGAAKQHAS------DGSCSDGPCRKRKA-SGGKAKDVVTTA 205
Query: 238 DPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVE----------PPKDYIHVRARRG 287
PK + PE R + D + + N K E PPKDYIHVRARRG
Sbjct: 206 TPK--SREPETMAKRRKLSTDAARDEAGSHGNGKGKEVAPAAEPEPQPPKDYIHVRARRG 263
Query: 288 QATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
QATDSHSLAERVRREKISERMK LQDLVPGC+KVTGKAVMLDEIINYVQSLQ QVEFLSM
Sbjct: 264 QATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVEFLSM 323
Query: 348 KLATVNPRMDLNMEA-LLSKDLFQSCGYVQHSLYPGDCSVQT----FPSRYQPQQGSHLT 402
KL+TV+PR +L++ ++ KD D ++Q P+
Sbjct: 324 KLSTVDPRRELDVGCFVVPKD---------------DVTMQANRLCAPATSSSSSAFCYA 368
Query: 403 SSGINNNAENQFSINALNSSLHRNHNIQL---PPINGHGEVGPRVPSLW-DDDLQSLVQM 458
+ + NA+ + L NH + P + GP+ SLW +DDLQSLV M
Sbjct: 369 ARSVVTNAKGFETPLPLA-----NHGVAADDRPLERRTRDAGPQAGSLWEEDDLQSLVLM 423
Query: 459 GFN 461
GF
Sbjct: 424 GFR 426
>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 429
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/134 (67%), Positives = 108/134 (80%), Gaps = 3/134 (2%)
Query: 260 KSDSSKTKDN-SKPVEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPG 317
K + KDN S+ E PK+ +IHVRARRGQAT+SHSLAERVRREKISERM+ LQ+LVPG
Sbjct: 239 KQSVKQAKDNNSQSGEAPKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPG 298
Query: 318 CNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQS-CGYVQ 376
CNK+TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP ++ +++ +LSKD+ QS G+
Sbjct: 299 CNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFDVDRILSKDILQSRIGHGI 358
Query: 377 HSLYPGDCSVQTFP 390
+ PG S TFP
Sbjct: 359 GAYGPGINSSHTFP 372
>gi|168056080|ref|XP_001780050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668548|gb|EDQ55153.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 87/119 (73%), Positives = 98/119 (82%), Gaps = 6/119 (5%)
Query: 258 ENKSDSSKTKDNSKPVEPPKD-----YIHVRARRGQATDSHSLAERVRREKISERMKFLQ 312
EN DS+ + +PP+D YIHVRARRGQATDSHSLAERVRREKISERMKFLQ
Sbjct: 40 ENSGDSASPRSLKATSKPPQDLSKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQ 99
Query: 313 DLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQS 371
DLVPGC+K+TGKAVMLDEIINYVQSLQRQ+EFLSMKLA VNPR+D + + LL KD+ QS
Sbjct: 100 DLVPGCSKITGKAVMLDEIINYVQSLQRQIEFLSMKLAAVNPRLDYSYD-LLGKDMLQS 157
>gi|224067162|ref|XP_002302386.1| predicted protein [Populus trichocarpa]
gi|222844112|gb|EEE81659.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 103/207 (49%), Positives = 131/207 (63%), Gaps = 40/207 (19%)
Query: 260 KSDSSKTKDNSKPVEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC 318
K + + KD+++ E PK+ Y HVRARRGQAT+SHSLAERVRREKISERM+ LQ+LVPGC
Sbjct: 140 KQAAKQAKDDTQSGEVPKENYFHVRARRGQATNSHSLAERVRREKISERMRMLQELVPGC 199
Query: 319 NKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHS 378
NK+TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP + +++E +LSKD+ S G
Sbjct: 200 NKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELQIDVERILSKDILHSRG----- 254
Query: 379 LYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPI---- 434
G+ ++ F S GI SS +H I P I
Sbjct: 255 ---GNAAILGF-------------SPGI--------------SSHPYSHRIFQPGIQVIP 284
Query: 435 NGHGEVGPRVPSLWDDDLQSLVQMGFN 461
N + + P ++ D++LQS QMGF+
Sbjct: 285 NSNPQFSPAPHAVLDNELQSYFQMGFD 311
>gi|116787019|gb|ABK24344.1| unknown [Picea sitchensis]
Length = 467
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/263 (45%), Positives = 148/263 (56%), Gaps = 39/263 (14%)
Query: 150 ADPGFAERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQI 209
+DPGF E+AA+ S F N + +V S + N S SE
Sbjct: 167 SDPGFVEQAAKFSPFNNIDRNSSENVVCGASNLPPIVGGVQQGGGENM-----SVFSE-- 219
Query: 210 TSQTVTDSNPRKRKSIQRPKAKETPPTSDPKV----VAENPE-----------DSNSMRS 254
++ V D N +KR++ A+ + + K + E+ E DSNS +
Sbjct: 220 PTKCVDDGNGKKRRAKSLTSAENSKEPEEAKAKRCRLGESSEIDDDDNNDETSDSNSKKG 279
Query: 255 KQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDL 314
K E S+ S+ DN YIHVRARRGQATDSHSLAERVRREKI++RMKFLQDL
Sbjct: 280 K--EKNSNVSQKDDN---------YIHVRARRGQATDSHSLAERVRREKINQRMKFLQDL 328
Query: 315 VPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL---FQS 371
VP CNKVTGKAVMLDEIINYVQSLQ QVEFLSMKLATVNP++D N++ +K++ F S
Sbjct: 329 VPTCNKVTGKAVMLDEIINYVQSLQHQVEFLSMKLATVNPKLDFNIDNFFAKEMSGSFSS 388
Query: 372 CGY---VQHSLYPGDCSVQTFPS 391
G H S+QT PS
Sbjct: 389 KGMSPTYFHLDQLKQASLQTVPS 411
>gi|253761888|ref|XP_002489318.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
gi|241946966|gb|EES20111.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
Length = 324
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/176 (56%), Positives = 122/176 (69%), Gaps = 11/176 (6%)
Query: 203 SSLSEQITSQTVTDSNPRKRK-SIQRPKAK-----ETPPTSDPKVVAENPEDSNSMRSKQ 256
++ + + + +D RKRK S + KAK P + P+ A+ + S +
Sbjct: 149 GAVKQHASDGSCSDGPCRKRKASGGKSKAKVVVTPAAPKSRAPETRAKKCKLSTDVGHDD 208
Query: 257 DENKSDSSKT-KDNSK----PVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFL 311
+E K + + DNS EP KDYIHVRARRGQATDSHSLAERVRREKISERMK L
Sbjct: 209 EEQKPAAGEAWHDNSNGKEVAAEPSKDYIHVRARRGQATDSHSLAERVRREKISERMKLL 268
Query: 312 QDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKD 367
QDLVPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSMKL+TVNPR+ L++++ + KD
Sbjct: 269 QDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPRLKLDVDSCIPKD 324
>gi|79340401|ref|NP_172483.4| transcription factor bHLH74 [Arabidopsis thaliana]
gi|75291341|sp|Q6NKN9.1|BH074_ARATH RecName: Full=Transcription factor bHLH74; AltName: Full=Basic
helix-loop-helix protein 74; Short=AtbHLH74; Short=bHLH
74; AltName: Full=Transcription factor EN 90; AltName:
Full=bHLH transcription factor bHLH074
gi|46931340|gb|AAT06474.1| At1g10120 [Arabidopsis thaliana]
gi|62320956|dbj|BAD93978.1| bHLH transcription factor like protein [Arabidopsis thaliana]
gi|332190423|gb|AEE28544.1| transcription factor bHLH74 [Arabidopsis thaliana]
Length = 366
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/227 (45%), Positives = 143/227 (62%), Gaps = 15/227 (6%)
Query: 148 PAADPGFA-ERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLS 206
P + GFA + A L F SD K R+ R+ ++
Sbjct: 81 PGSVSGFAADMPASLLPFGDCGGGQIGHFLGSDKKGERLIRAGESSHEDH---------- 130
Query: 207 EQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDEN-KSDSSK 265
Q++ V ++P ++ + P+A+ + E+P+ N K+ +N +S +
Sbjct: 131 HQVSDDAVLGASPVGKRRL--PEAESQWNKKAVEEFQEDPQRGNDQSQKKHKNDQSKETV 188
Query: 266 TKDNSKPVEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGK 324
K++S+ E PK+ YIH+RARRGQAT+SHSLAERVRREKISERM+ LQ+LVPGCNK+TGK
Sbjct: 189 NKESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGK 248
Query: 325 AVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQS 371
AVMLDEIINYVQSLQ+QVEFLSMKLATVNP ++++++ +L+KDL QS
Sbjct: 249 AVMLDEIINYVQSLQQQVEFLSMKLATVNPEINIDIDRILAKDLLQS 295
>gi|223702402|gb|ACN21632.1| putative basic helix-loop-helix protein BHLH7 [Lotus japonicus]
Length = 340
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/167 (60%), Positives = 114/167 (68%), Gaps = 25/167 (14%)
Query: 229 KAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKT-----KDN-------------- 269
K +++ +PK+VAEN DS R K D +S+ T KDN
Sbjct: 93 KKRKSDKPHNPKIVAEN--DSKDKRIKVDSEDGESNITGKISIKDNKTATKSKNRGTCAN 150
Query: 270 ---SKPVEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKA 325
SK E K DYIHVRARRGQATDSHSLAERVRREKISERMK+LQDLVPGCNK+TGKA
Sbjct: 151 SSNSKENEDQKLDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKA 210
Query: 326 VMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSC 372
MLDEIINYVQSLQRQVEFLSMKLATVNP ++ N + L K +F SC
Sbjct: 211 GMLDEIINYVQSLQRQVEFLSMKLATVNPALEFNSDDLFDKVVFPSC 257
>gi|110738493|dbj|BAF01172.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 314
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/227 (45%), Positives = 143/227 (62%), Gaps = 15/227 (6%)
Query: 148 PAADPGFA-ERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLS 206
P + GFA + A L F SD K R+ R+ ++
Sbjct: 29 PGSVSGFAADMPASLLPFGDCGGGQIGHFLGSDKKGERLIRAGESSHEDH---------- 78
Query: 207 EQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDEN-KSDSSK 265
Q++ V ++P ++ + P+A+ + E+P+ N K+ +N +S +
Sbjct: 79 HQVSDDAVLGASPVGKRRL--PEAESQWNKKAVEEFQEDPQRGNDQSQKKHKNDQSKETV 136
Query: 266 TKDNSKPVEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGK 324
K++S+ E PK+ YIH+RARRGQAT+SHSLAERVRREKISERM+ LQ+LVPGCNK+TGK
Sbjct: 137 NKESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGK 196
Query: 325 AVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQS 371
AVMLDEIINYVQSLQ+QVEFLSMKLATVNP ++++++ +L+KDL QS
Sbjct: 197 AVMLDEIINYVQSLQQQVEFLSMKLATVNPEINIDIDRILAKDLLQS 243
>gi|79318615|ref|NP_001031093.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|45935021|gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana]
gi|46367460|emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana]
gi|332192548|gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 339
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/204 (49%), Positives = 131/204 (64%), Gaps = 15/204 (7%)
Query: 240 KVVAENPEDSNSMRSKQDEN-KSDSSKTKDNSKPVEPPKD-YIHVRARRGQATDSHSLAE 297
K + ++ E+ + K +++ S+++KT +P + KD YIH+RARRGQAT+SHSLAE
Sbjct: 128 KRIGKDCEEEEDKKQKDEQSPTSNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAE 187
Query: 298 RVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMD 357
RVRREKISERMKFLQDLVPGC+KVTGKAVMLDEIINYVQSLQ Q+EFLSMKL+ VNP +D
Sbjct: 188 RVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLD 247
Query: 358 LNMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQG--------SHLTSSGINNN 409
N+E+LL+KD QS +P + S+ P Y Q G L S G+
Sbjct: 248 FNLESLLAKDALQSSA----PTFPHNMSMLYPPVSYLSQTGFMQPNISSMSLLSGGLKRQ 303
Query: 410 AENQFSINALNSSLHRNHNIQLPP 433
+ + + N +H NH P
Sbjct: 304 ETHGYESDHHN-LVHMNHETGTAP 326
>gi|326496517|dbj|BAJ94720.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 261
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/246 (45%), Positives = 144/246 (58%), Gaps = 35/246 (14%)
Query: 227 RPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPV--EPPKDYIHVRA 284
RPK +E T+ A + KQ + K SK +P EPP+DY+HVRA
Sbjct: 20 RPKVEEEAATA----TASDGSAGGERGRKQAKGKVSKSK-----QPAADEPPRDYVHVRA 70
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
RRGQATDSHSLAERVRREKI+ +MK LQDLVPGCNKV GKA+MLDEIINYVQSLQ+QVEF
Sbjct: 71 RRGQATDSHSLAERVRREKITLKMKMLQDLVPGCNKVIGKALMLDEIINYVQSLQQQVEF 130
Query: 345 LSMKLATVNPRMDLN-MEALLSKDLFQSCGYVQHSLYPGDCSVQTFP-----SRYQPQQG 398
LSMKL+TVNP++D + + LL KD+ Q+ G +++P + + +P YQP
Sbjct: 131 LSMKLSTVNPQLDFDTLSNLLHKDMNQALGPSASTVFPLESAGTVYPLCDQADLYQP--- 187
Query: 399 SHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPINGHGEVGPRVPSLWDDDLQSLVQM 458
SSG ENQ S+ L+ +L H Q P + W+ Q+ + M
Sbjct: 188 ---FSSGA---MENQCSMGLLDMAL--PHAPQYP-------FQKQQQDFWEASAQNALHM 232
Query: 459 GFNQNQ 464
Q+Q
Sbjct: 233 EHGQSQ 238
>gi|297849334|ref|XP_002892548.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
gi|297338390|gb|EFH68807.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/230 (45%), Positives = 141/230 (61%), Gaps = 21/230 (9%)
Query: 148 PAADPGFA-ERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLS 206
P + GFA + A L + SD K R+ R+ ++
Sbjct: 79 PGSGSGFAADMPASLLPYGDCGGGQIGHFLGSDKKGERLIRAGESSHEDH---------- 128
Query: 207 EQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPED----SNSMRSKQDENKSD 262
Q++ V ++P I + + E + K V E ED S+ + K ++S
Sbjct: 129 HQVSDDAVLGASP-----IGKRRLPEAESQWNKKAVEEFQEDPQRGSDQSQKKHKNDQSK 183
Query: 263 SSKTKDNSKPVEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKV 321
+ K++S+ E PK+ YIH+RARRGQAT+SHSLAERVRREKISERM+ LQ+LVPGCNK+
Sbjct: 184 ETVNKESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKI 243
Query: 322 TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQS 371
TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP ++++++ +L+KDL QS
Sbjct: 244 TGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEINIDIDRILAKDLLQS 293
>gi|110741191|dbj|BAF02146.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 366
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 102/227 (44%), Positives = 142/227 (62%), Gaps = 15/227 (6%)
Query: 148 PAADPGFA-ERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLS 206
P + GFA + A L F SD K R+ R+ ++
Sbjct: 81 PGSVSGFAADMPASLLPFGDCGGGQIGHFLGSDKKGERLIRAGESSHEDH---------- 130
Query: 207 EQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDEN-KSDSSK 265
Q++ V ++P ++ + P+A+ + E+P+ N K+ +N +S +
Sbjct: 131 HQVSDDAVLGASPVGKRRL--PEAESQWNKKAVEEFQEDPQRGNDQSQKKHKNDQSKETV 188
Query: 266 TKDNSKPVEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGK 324
K++S+ E PK+ YIH+RARRGQAT+SHSLAERVRREKISERM+ LQ+L PGCNK+TGK
Sbjct: 189 NKESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELAPGCNKITGK 248
Query: 325 AVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQS 371
AVMLDEIINYVQSLQ+QVEFLSMKLATVNP ++++++ +L+KDL QS
Sbjct: 249 AVMLDEIINYVQSLQQQVEFLSMKLATVNPEINIDIDRILAKDLLQS 295
>gi|357473295|ref|XP_003606932.1| BHLH transcription factor [Medicago truncatula]
gi|355507987|gb|AES89129.1| BHLH transcription factor [Medicago truncatula]
Length = 344
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/131 (67%), Positives = 103/131 (78%), Gaps = 4/131 (3%)
Query: 242 VAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPK---DYIHVRARRGQATDSHSLAER 298
+ E + + + + K EN D +K+NSK E DYIHVRARRGQATDSHSLAER
Sbjct: 101 ITEQIKGNKNTKLKNREN-CDDVGSKENSKGSEIQNHKPDYIHVRARRGQATDSHSLAER 159
Query: 299 VRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDL 358
VRREKISERMK+LQDLVPGCNK+ GKA MLDEIINYVQSLQRQVEFLSMKLA VNPR+D
Sbjct: 160 VRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF 219
Query: 359 NMEALLSKDLF 369
N++ L +K++F
Sbjct: 220 NIDELFAKEVF 230
>gi|168039065|ref|XP_001772019.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676620|gb|EDQ63100.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 91/133 (68%), Positives = 101/133 (75%), Gaps = 14/133 (10%)
Query: 243 AENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRRE 302
+EN DS S R+ +D N N + +DYIHVRARRGQATDSHSLAERVRRE
Sbjct: 24 SENSGDSGSPRALKDSN---------NRNKILSKQDYIHVRARRGQATDSHSLAERVRRE 74
Query: 303 KISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP-----RMD 357
KISERMK+LQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE LSMKLA+VNP R+D
Sbjct: 75 KISERMKYLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVESLSMKLASVNPGPSTARLD 134
Query: 358 LNMEALLSKDLFQ 370
N E L+KD+ Q
Sbjct: 135 YNFETALNKDMLQ 147
>gi|449440736|ref|XP_004138140.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
gi|449477343|ref|XP_004154996.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
Length = 276
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 84/129 (65%), Positives = 101/129 (78%), Gaps = 2/129 (1%)
Query: 242 VAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRR 301
V E+ +++ ++++ D N SD K + S EPPKDYIHVRARRGQATDSHSLAER RR
Sbjct: 107 VVESRDENGGIKAEVDPNSSDGKKLAEQSPKPEPPKDYIHVRARRGQATDSHSLAERARR 166
Query: 302 EKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDL--N 359
EKISERMK LQDLVPGCNKV GKA++LDEIINY+QSLQRQVEFLSMKL VN RM++
Sbjct: 167 EKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNITPG 226
Query: 360 MEALLSKDL 368
+E K++
Sbjct: 227 IEGFTVKNI 235
>gi|55419646|gb|AAV51936.1| bHLH transcription factor [Gossypium hirsutum]
Length = 222
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/212 (50%), Positives = 126/212 (59%), Gaps = 31/212 (14%)
Query: 209 ITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMR------------SKQ 256
+T Q+V RKRK + E+ A DSN R SK+
Sbjct: 6 VTEQSVGCGGGRKRKEL--SSEDESSKIVSTTTSANELNDSNGKRMKTPVSKNGNTGSKE 63
Query: 257 DE---NKSDSSKTKDNSKPVEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQ 312
E + +D SK NSKP EPPK DYIHVRARRGQATDSHSLAER RRE+ISERMK LQ
Sbjct: 64 AEVEASSADGSKPDKNSKPAEPPKQDYIHVRARRGQATDSHSLAERARRERISERMKILQ 123
Query: 313 DLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLN--MEALLSKDLFQ 370
DLVPGCNKV GKA++LDEIINY+QSLQ+QVEFLSMKL VN R+++N E SKDL
Sbjct: 124 DLVPGCNKVIGKALVLDEIINYIQSLQQQVEFLSMKLEAVNSRINVNPSFEGFHSKDL-- 181
Query: 371 SCGYVQHSLYPGDCSVQTFPSRYQPQ--QGSH 400
L P D + F S+ + QG H
Sbjct: 182 -------GLQPIDGAGMIFGSQTAREYAQGLH 206
>gi|297851058|ref|XP_002893410.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297339252|gb|EFH69669.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 347
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/149 (62%), Positives = 112/149 (75%), Gaps = 7/149 (4%)
Query: 253 RSKQDENKSDSSKTKDNS--KPVEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMK 309
+ ++DE S+S+ K NS + + KD YIH+RARRGQAT+SHSLAERVRREKISERMK
Sbjct: 136 KMQKDEQSSNSNVNKTNSEKQASDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMK 195
Query: 310 FLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLF 369
FLQDLVPGC+KVTGKAVMLDEIINYVQSLQ Q+EFLSMKL+ VNP +D N+E+LL+KD
Sbjct: 196 FLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDFNLESLLAKDAL 255
Query: 370 QSCGYVQHSLYPGDCSVQTFPSRYQPQQG 398
QS +P + S+ P Y Q G
Sbjct: 256 QSSA----PTFPQNMSMLYPPLSYLSQTG 280
>gi|125526612|gb|EAY74726.1| hypothetical protein OsI_02617 [Oryza sativa Indica Group]
Length = 386
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 139/413 (33%), Positives = 190/413 (46%), Gaps = 132/413 (31%)
Query: 154 FAERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQT 213
AERAAR+SC A + A+ S+ L ++ ++ + + +GSS
Sbjct: 2 IAERAARMSCLAAAGHGGGKLSRAASSQSL-LAETAAAGGVHQLPASDGSS--------- 51
Query: 214 VTDSNPRKRKS-IQRPKAKETPPT------------------SDPKVVAENPEDSN-SMR 253
+D+ RKRK+ + + K+ T + P+ + P+ +
Sbjct: 52 -SDAPCRKRKAPCAKARGKDAATTIAKVLRLLSAPPLQSRRRTSPETMVNFPQSPEPGTK 110
Query: 254 SKQDENKSDSSKTKDNSKPV-------------------EPPKDYIHVRARRGQATDSHS 294
+K+ + +D++ +D +KPV EPPKDYIHVRARRGQATDSHS
Sbjct: 111 AKKCKLSADAAGDED-TKPVAGDAGHGGNGKGKVLDAAGEPPKDYIHVRARRGQATDSHS 169
Query: 295 LAERV--------------------------------RREKISERMKFLQDLVPGCNKV- 321
LAERV RREKISERMK LQDLVPGCNKV
Sbjct: 170 LAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRREKISERMKLLQDLVPGCNKVA 229
Query: 322 -------------TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
TGKAVMLDEIINYVQSLQRQVEFLSMKL+TVNP++D +++ + KD
Sbjct: 230 KFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPQLDFDVDNFIPKDA 289
Query: 369 --------------FQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQF 414
Y PG C Y QG+ + S + + +
Sbjct: 290 SDPIMPAPLSLPPPPPPLSYSPEGASPGIC--------YASSQGTAMQSV-VTSTKHLET 340
Query: 415 SINALNSSLHRNHNIQLPPING----HGEVGPRVPSLWDDDLQSLVQMGFNQN 463
+ N +H I +P ++G H + G +W+DDLQS+VQMGF N
Sbjct: 341 APTFAN-----HHVIPVPSLDGFHSAHSQAG---SCMWEDDLQSVVQMGFRGN 385
>gi|168046350|ref|XP_001775637.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673055|gb|EDQ59584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/95 (87%), Positives = 89/95 (93%), Gaps = 2/95 (2%)
Query: 275 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINY 334
P +DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC+KVTGKAVMLDEIINY
Sbjct: 69 PKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 128
Query: 335 VQSLQRQVEFLSMKLATVN-PRMDLNMEALLSKDL 368
VQSLQRQ+EFLSMKLA VN PR+D N + LLSKD+
Sbjct: 129 VQSLQRQIEFLSMKLAAVNPPRLDHNYD-LLSKDM 162
>gi|297602519|ref|NP_001052532.2| Os04g0350700 [Oryza sativa Japonica Group]
gi|57834129|emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa Japonica Group]
gi|215766234|dbj|BAG98462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675358|dbj|BAF14446.2| Os04g0350700 [Oryza sativa Japonica Group]
Length = 263
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 78/95 (82%), Positives = 87/95 (91%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
EP KDYIHVRARRGQATDSHSLAERVRRE+ISERMK LQ LVPGCNK+TGKA+MLDEIIN
Sbjct: 73 EPAKDYIHVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIIN 132
Query: 334 YVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
YVQSLQRQVEFLSMKLAT+NP++D + + SKD+
Sbjct: 133 YVQSLQRQVEFLSMKLATMNPQLDFDSHYMPSKDM 167
>gi|222628662|gb|EEE60794.1| hypothetical protein OsJ_14380 [Oryza sativa Japonica Group]
Length = 293
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 78/95 (82%), Positives = 87/95 (91%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
EP KDYIHVRARRGQATDSHSLAERVRRE+ISERMK LQ LVPGCNK+TGKA+MLDEIIN
Sbjct: 103 EPAKDYIHVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIIN 162
Query: 334 YVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
YVQSLQRQVEFLSMKLAT+NP++D + + SKD+
Sbjct: 163 YVQSLQRQVEFLSMKLATMNPQLDFDSHYMPSKDM 197
>gi|168056950|ref|XP_001780480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668066|gb|EDQ54681.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 93/133 (69%), Positives = 107/133 (80%), Gaps = 12/133 (9%)
Query: 247 EDSNSMRSKQ---DENKSDSS------KTKDNSKPVEPPK-DYIHVRARRGQATDSHSLA 296
ED +++++Q EN DS K + +P + PK DYIHVRARRGQATDSHSLA
Sbjct: 19 EDVRAVKAEQASASENSGDSISPRSTLKGATSKRPQDFPKQDYIHVRARRGQATDSHSLA 78
Query: 297 ERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN-PR 355
ERVRREKISERMKFLQDLVPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN PR
Sbjct: 79 ERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNVPR 138
Query: 356 MDLNMEALLSKDL 368
+D + + LLSK++
Sbjct: 139 LDYSYD-LLSKEM 150
>gi|242033101|ref|XP_002463945.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
gi|241917799|gb|EER90943.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
Length = 315
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/215 (46%), Positives = 137/215 (63%), Gaps = 41/215 (19%)
Query: 252 MRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFL 311
M+SK+D + D +K +DY+HVRA+RGQAT+SHSLAER+RR+KISERMK L
Sbjct: 119 MQSKEDSSDGDGTK-----------EDYVHVRAKRGQATNSHSLAERLRRKKISERMKLL 167
Query: 312 QDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLF-- 369
QDLVPGCNK+TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP + ++E ++SK +
Sbjct: 168 QDLVPGCNKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPELGFDIEQIISKQMMLS 227
Query: 370 QSCGYVQHSLYPGDCSVQTFP---SRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRN 426
Q + + PG S+ T P QP+ ++++ ++ L+ ++H
Sbjct: 228 QDRHLAFYGVDPGSSSL-TAPFNQGIMQPEMMCNISN-----------PVDVLHGTIH-- 273
Query: 427 HNIQLPPINGHGEVGPRVPSLWDDDLQSLVQMGFN 461
L +N ++PS+W + +Q++ QM FN
Sbjct: 274 ---DLSTMN-------QIPSMW-EGVQNMPQMNFN 297
>gi|242082417|ref|XP_002445977.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
gi|241942327|gb|EES15472.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
Length = 343
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/251 (43%), Positives = 132/251 (52%), Gaps = 49/251 (19%)
Query: 145 LPIPAA-----DPGFAERAAR----------LSCFAGSQMNMNSSVSASDSKKLRVSRSS 189
LP PAA DPG + A R L GS D+ S
Sbjct: 40 LPSPAALEHFMDPGLVQLAMRSSYITSEEHPLQATTGSGNGEPGFGGGGDAPSAEACSSR 99
Query: 190 TPESNNNADSKEGSSLSEQITSQTVTDSN--------PRKRKSIQRPKAKETPPTSDPKV 241
PE ++N++ ++ S+ E + TD + ++R +ETPP + K
Sbjct: 100 VPEPDSNSNKRKRSN--EDVLGMIGTDQDQGMPSVDSSKERGEDDAKGKEETPPATRKK- 156
Query: 242 VAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRR 301
K K S + YIHVRAR+GQAT+ HSLAER+RR
Sbjct: 157 -----------------------KGKGASAADGESESYIHVRARKGQATNRHSLAERLRR 193
Query: 302 EKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNME 361
EKISERMK LQDLVPGC KVTGKAVMLDEIINYVQSLQRQVEFLSMKLA VNP++ LN++
Sbjct: 194 EKISERMKLLQDLVPGCTKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAAVNPQLGLNIK 253
Query: 362 ALLSKDLFQSC 372
LLSKD + C
Sbjct: 254 QLLSKDFCKKC 264
>gi|115455099|ref|NP_001051150.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|28273388|gb|AAO38474.1| putative Helix-loop-helix DNA-binding domain containing protein
[Oryza sativa Japonica Group]
gi|50428703|gb|AAT77054.1| putative DNA binding protein [Oryza sativa Japonica Group]
gi|108710880|gb|ABF98675.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549621|dbj|BAF13064.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|125544737|gb|EAY90876.1| hypothetical protein OsI_12481 [Oryza sativa Indica Group]
gi|125587792|gb|EAZ28456.1| hypothetical protein OsJ_12437 [Oryza sativa Japonica Group]
Length = 327
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 113/157 (71%), Gaps = 14/157 (8%)
Query: 218 NPRKRKSIQRPKAKETPPTSDPKVVA---ENPEDSNSMRSKQDENKSDSSKTKDNSKPVE 274
NP IQ ++T +S + ++ +N + + M+SK+D + D +K
Sbjct: 91 NPSASSRIQNVGDQQTEVSSQQERISMEEDNQKSCSKMQSKEDSSDGDGTK--------- 141
Query: 275 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINY 334
+DY+HVRA+RGQAT+SHSLAER+RR+KISERMK LQDLVPGC+K+TGKAVMLDEIINY
Sbjct: 142 --EDYVHVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINY 199
Query: 335 VQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQS 371
VQSLQRQVEFLSMKLATVNP + ++E +LSK + S
Sbjct: 200 VQSLQRQVEFLSMKLATVNPELSFDIEQILSKQMMLS 236
>gi|125578091|gb|EAZ19313.1| hypothetical protein OsJ_34859 [Oryza sativa Japonica Group]
Length = 311
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/142 (61%), Positives = 100/142 (70%), Gaps = 14/142 (9%)
Query: 240 KVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERV 299
K+ A+ D ++ D + K K EPPKDYIHVRARRGQATDSHSLAERV
Sbjct: 103 KLSADAAGDEDTKPVAGDAGHGGNGKGKVLDAAGEPPKDYIHVRARRGQATDSHSLAERV 162
Query: 300 RREKISERMKFLQDLVPGCNK--------------VTGKAVMLDEIINYVQSLQRQVEFL 345
RREKISERMK LQDLVPGCNK VTGKAVMLDEIINYVQSLQRQVEFL
Sbjct: 163 RREKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVEFL 222
Query: 346 SMKLATVNPRMDLNMEALLSKD 367
SMKL+TVNP++D +++ + KD
Sbjct: 223 SMKLSTVNPQLDFDVDNFIPKD 244
>gi|33339703|gb|AAQ14331.1|AF283506_1 MYC1 [Catharanthus roseus]
Length = 271
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/115 (70%), Positives = 93/115 (80%), Gaps = 1/115 (0%)
Query: 257 DENKSDSSKTKDNSKPVEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLV 315
+EN ++ ++ +KP EPPK DYIHVRARRGQATDSHSLAER RREKISERMK LQDLV
Sbjct: 118 NENHESKAEGEETAKPAEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLV 177
Query: 316 PGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQ 370
PGCNKV GKA++LDEIINY+QSLQRQVEFLSMKL VN R+ +E SK+ Q
Sbjct: 178 PGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLSPGIEGFPSKEFGQ 232
>gi|3096922|emb|CAA18832.1| putative protein [Arabidopsis thaliana]
gi|7270403|emb|CAB80170.1| putative protein [Arabidopsis thaliana]
Length = 324
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/161 (57%), Positives = 116/161 (72%), Gaps = 12/161 (7%)
Query: 216 DSNPRKRK-SIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQ-----DEN--KSDSSKTK 267
D N +K+K ++ R E K+ +N + S++ + +EN +DSSK
Sbjct: 102 DCNEKKKKMTMNRDDLVEEGEEEKSKITEQNNGSTKSIKKMKHKAKKEENNFSNDSSKV- 160
Query: 268 DNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVM 327
+K +E DYIHVRARRGQATDSHS+AERVRREKISERMKFLQDLVPGC+K+TGKA M
Sbjct: 161 --TKELEKT-DYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGM 217
Query: 328 LDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
LDEIINYVQSLQRQ+EFLSMKLA VNPR D +M+ + +K++
Sbjct: 218 LDEIINYVQSLQRQIEFLSMKLAIVNPRPDFDMDDIFAKEV 258
>gi|357117083|ref|XP_003560304.1| PREDICTED: transcription factor bHLH74-like isoform 1 [Brachypodium
distachyon]
Length = 326
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 82/130 (63%), Positives = 101/130 (77%), Gaps = 11/130 (8%)
Query: 242 VAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRR 301
+ EN S M+SK+D + D +K +DY+H+RA+RGQAT+SHSLAER+RR
Sbjct: 117 LEENRTISPKMQSKEDSSDGDGTK-----------EDYVHIRAKRGQATNSHSLAERLRR 165
Query: 302 EKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNME 361
+KISERMK LQDLVPGC+K+TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP + ++E
Sbjct: 166 KKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPELGFDIE 225
Query: 362 ALLSKDLFQS 371
+LSK + S
Sbjct: 226 QILSKQMMLS 235
>gi|357117085|ref|XP_003560305.1| PREDICTED: transcription factor bHLH74-like isoform 2 [Brachypodium
distachyon]
Length = 317
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 82/130 (63%), Positives = 101/130 (77%), Gaps = 11/130 (8%)
Query: 242 VAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRR 301
+ EN S M+SK+D + D +K +DY+H+RA+RGQAT+SHSLAER+RR
Sbjct: 111 LEENRTISPKMQSKEDSSDGDGTK-----------EDYVHIRAKRGQATNSHSLAERLRR 159
Query: 302 EKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNME 361
+KISERMK LQDLVPGC+K+TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP + ++E
Sbjct: 160 KKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPELGFDIE 219
Query: 362 ALLSKDLFQS 371
+LSK + S
Sbjct: 220 QILSKQMMLS 229
>gi|20127066|gb|AAM10952.1|AF488596_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 335
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 92/161 (57%), Positives = 116/161 (72%), Gaps = 12/161 (7%)
Query: 216 DSNPRKRK-SIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQ-----DEN--KSDSSKTK 267
D N +K+K ++ R E K+ +N + S++ + +EN +DSSK
Sbjct: 102 DCNEKKKKVTMNRDDLVEEGEEEKSKITEQNNGSTKSIKKMKHKAKKEENNFSNDSSKV- 160
Query: 268 DNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVM 327
+K +E DYIHVRARRGQATDSHS+AERVRREKISERMKFLQDLVPGC+K+TGKA M
Sbjct: 161 --TKELEKT-DYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGM 217
Query: 328 LDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
LDEIINYVQSLQRQ+EFLSMKLA VNPR D +M+ + +K++
Sbjct: 218 LDEIINYVQSLQRQIEFLSMKLAIVNPRPDFDMDDIFAKEV 258
>gi|22329164|ref|NP_195179.2| transcription factor bHLH63 [Arabidopsis thaliana]
gi|75299602|sp|Q8GY61.1|BH063_ARATH RecName: Full=Transcription factor bHLH63; AltName: Full=Basic
helix-loop-helix protein 63; Short=AtbHLH63; Short=bHLH
63; AltName: Full=Transcription factor EN 84; AltName:
Full=bHLH transcription factor bHLH063
gi|26450757|dbj|BAC42487.1| putative bHLH transcription factor bHLH063 [Arabidopsis thaliana]
gi|28950907|gb|AAO63377.1| At4g34530 [Arabidopsis thaliana]
gi|332660989|gb|AEE86389.1| transcription factor bHLH63 [Arabidopsis thaliana]
Length = 335
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 92/161 (57%), Positives = 116/161 (72%), Gaps = 12/161 (7%)
Query: 216 DSNPRKRK-SIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQ-----DEN--KSDSSKTK 267
D N +K+K ++ R E K+ +N + S++ + +EN +DSSK
Sbjct: 102 DCNEKKKKMTMNRDDLVEEGEEEKSKITEQNNGSTKSIKKMKHKAKKEENNFSNDSSKV- 160
Query: 268 DNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVM 327
+K +E DYIHVRARRGQATDSHS+AERVRREKISERMKFLQDLVPGC+K+TGKA M
Sbjct: 161 --TKELEKT-DYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGM 217
Query: 328 LDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
LDEIINYVQSLQRQ+EFLSMKLA VNPR D +M+ + +K++
Sbjct: 218 LDEIINYVQSLQRQIEFLSMKLAIVNPRPDFDMDDIFAKEV 258
>gi|21539493|gb|AAM53299.1| unknown protein [Arabidopsis thaliana]
Length = 335
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 92/161 (57%), Positives = 116/161 (72%), Gaps = 12/161 (7%)
Query: 216 DSNPRKRK-SIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQ-----DEN--KSDSSKTK 267
D N +K+K ++ R E K+ +N + S++ + +EN +DSSK
Sbjct: 102 DCNEKKKKMTMNRDDLVEEGEEEKSKITEQNNGSTKSIKKMKHKAKKEENNFSNDSSKV- 160
Query: 268 DNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVM 327
+K +E DYIHVRARRGQATDSHS+AERVRREKISERMKFLQDLVPGC+K+TGKA M
Sbjct: 161 --TKELEKT-DYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGM 217
Query: 328 LDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
LDEIINYVQSLQRQ+EFLSMKLA VNPR D +M+ + +K++
Sbjct: 218 LDEIINYVQSLQRQIEFLSMKLAIVNPRPDFDMDDIFAKEV 258
>gi|225430730|ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like [Vitis vinifera]
Length = 362
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 113/157 (71%), Gaps = 9/157 (5%)
Query: 222 RKSIQRPKAKE--TPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDY 279
R S+++ KA+ T D K+ + E+ + + K E ++SK + KP DY
Sbjct: 133 RNSVKKRKAEVALTEECKDQKIKRDEEEEESKIEEKHSEISPNASKVSGSPKP-----DY 187
Query: 280 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 339
IHVRARRGQATDSHSLAER RREKIS++MK+LQDLVPGCNK+TGKA MLDEIINYVQSLQ
Sbjct: 188 IHVRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 247
Query: 340 RQVEFLSMKLATVNPRMDLNMEALLSKDL--FQSCGY 374
RQVEFLS+KLAT+NPR D N++ L K+ + + G+
Sbjct: 248 RQVEFLSLKLATMNPRTDFNLDTFLGKEFPAYVAAGF 284
>gi|326514032|dbj|BAJ92166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 316
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 112/258 (43%), Positives = 148/258 (57%), Gaps = 47/258 (18%)
Query: 220 RKRKSIQRPKAKETPPTSDPKV------VAENPEDSNSM---------RSKQDENKSDSS 264
+KRK A P S V V+ PE SNSM +++ E+ SD
Sbjct: 71 KKRKGTNDCIALLNPSASSKNVGDQQTEVSSQPE-SNSMERDNRKISPKTQSKEDSSDGD 129
Query: 265 KTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGK 324
TK+N Y+H+RA+RGQAT+SHSLAER+RR+KISERMK LQDLVPGCNK+TGK
Sbjct: 130 GTKEN---------YVHLRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGK 180
Query: 325 AVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQH-SLYPGD 383
AVMLDEIINYVQSLQRQVEFLSMKLATVNP + ++E +LSK + S +H Y D
Sbjct: 181 AVMLDEIINYVQSLQRQVEFLSMKLATVNPELGFDIEQILSKQMMLSQD--RHLGFYGAD 238
Query: 384 CSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPINGHGEVGPR 443
+ + QG + + NA N + AL+ ++H + +N +
Sbjct: 239 PGASALIAHF--NQG--MMHPDMICNASN--PVGALHGTIH-----DISTMN-------Q 280
Query: 444 VPSLWDDDLQSLVQMGFN 461
+P +W + LQ++ M FN
Sbjct: 281 MPEMW-ETLQNIPHMNFN 297
>gi|297735141|emb|CBI17503.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 113/157 (71%), Gaps = 9/157 (5%)
Query: 222 RKSIQRPKAKE--TPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDY 279
R S+++ KA+ T D K+ + E+ + + K E ++SK + KP DY
Sbjct: 133 RNSVKKRKAEVALTEECKDQKIKRDEEEEESKIEEKHSEISPNASKVSGSPKP-----DY 187
Query: 280 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 339
IHVRARRGQATDSHSLAER RREKIS++MK+LQDLVPGCNK+TGKA MLDEIINYVQSLQ
Sbjct: 188 IHVRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 247
Query: 340 RQVEFLSMKLATVNPRMDLNMEALLSKDL--FQSCGY 374
RQVEFLS+KLAT+NPR D N++ L K+ + + G+
Sbjct: 248 RQVEFLSLKLATMNPRTDFNLDTFLGKEFPAYVAAGF 284
>gi|297802514|ref|XP_002869141.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
gi|297314977|gb|EFH45400.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/110 (74%), Positives = 93/110 (84%), Gaps = 4/110 (3%)
Query: 262 DSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKV 321
DSSK +K +E DYIHVRARRGQATDSHS+AERVRREKISERMKFLQDLVPGC+K+
Sbjct: 153 DSSKV---TKELEK-TDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKI 208
Query: 322 TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQS 371
TGKA MLDEIINYVQSLQRQ+EFLSMKLA VNPR D +M+ + K++ S
Sbjct: 209 TGKAGMLDEIINYVQSLQRQIEFLSMKLAVVNPRPDFDMDDIFDKEVIVS 258
>gi|225424835|ref|XP_002272776.1| PREDICTED: transcription factor BPE-like [Vitis vinifera]
Length = 277
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/124 (68%), Positives = 97/124 (78%), Gaps = 9/124 (7%)
Query: 256 QDENKSDSSKTKDNS-KPVE-------PPK-DYIHVRARRGQATDSHSLAERVRREKISE 306
+DEN+ ++ + +S KPVE PPK D+IHVRARRGQATDSHSLAER RREKISE
Sbjct: 116 RDENRDSKTEVETSSGKPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISE 175
Query: 307 RMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSK 366
RMK LQDLVPGCNKV GKA++LDEIINY+QSLQRQVEFLSMKL VN RM+ +E SK
Sbjct: 176 RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNSGIEGFPSK 235
Query: 367 DLFQ 370
D Q
Sbjct: 236 DFGQ 239
>gi|225456604|ref|XP_002267633.1| PREDICTED: transcription factor bHLH79 isoform 1 [Vitis vinifera]
Length = 284
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/128 (63%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
Query: 242 VAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPK-DYIHVRARRGQATDSHSLAERVR 300
++ P+++ +++ + + K + SKP E K DYIHVRARRGQATDSHSLAER R
Sbjct: 116 ISRTPDENGGSKAELEASSVAGEKPAEESKPAEQSKQDYIHVRARRGQATDSHSLAERAR 175
Query: 301 REKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNM 360
REKISERMK LQDLVPGCNKV GKA++LDEIINY+QSLQRQVEFLSMKL VN RM+ +
Sbjct: 176 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNHTV 235
Query: 361 EALLSKDL 368
E KDL
Sbjct: 236 EGFPLKDL 243
>gi|296086467|emb|CBI32056.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/124 (68%), Positives = 97/124 (78%), Gaps = 9/124 (7%)
Query: 256 QDENKSDSSKTKDNS-KPVE-------PPK-DYIHVRARRGQATDSHSLAERVRREKISE 306
+DEN+ ++ + +S KPVE PPK D+IHVRARRGQATDSHSLAER RREKISE
Sbjct: 47 RDENRDSKTEVETSSGKPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISE 106
Query: 307 RMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSK 366
RMK LQDLVPGCNKV GKA++LDEIINY+QSLQRQVEFLSMKL VN RM+ +E SK
Sbjct: 107 RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNSGIEGFPSK 166
Query: 367 DLFQ 370
D Q
Sbjct: 167 DFGQ 170
>gi|255558300|ref|XP_002520177.1| DNA binding protein, putative [Ricinus communis]
gi|223540669|gb|EEF42232.1| DNA binding protein, putative [Ricinus communis]
Length = 265
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/151 (60%), Positives = 101/151 (66%), Gaps = 5/151 (3%)
Query: 254 SKQDENKSDSSKTKDNSKPVEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQ 312
SK + S + N++P E PK DYIHVRARRGQATDSHSLAER RREKISERMK LQ
Sbjct: 109 SKSEAEPSSGKHVEQNTQPPELPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQ 168
Query: 313 DLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL---- 368
DLVPGCNKV GKA++LDEIINY+QSLQRQVEFLSMKL VN RM +EA SKD
Sbjct: 169 DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNTRMTPGIEAFPSKDFGQQT 228
Query: 369 FQSCGYVQHSLYPGDCSVQTFPSRYQPQQGS 399
F + G S D + T P Q G
Sbjct: 229 FDAAGMAFGSQATRDYNRGTSPEWLHMQVGG 259
>gi|168000495|ref|XP_001752951.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695650|gb|EDQ81992.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 119
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/104 (76%), Positives = 94/104 (90%)
Query: 265 KTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGK 324
K++ S+ + P + YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVP C+KVTGK
Sbjct: 8 KSRSKSQVMHPKQHYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPSCSKVTGK 67
Query: 325 AVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
AVMLDEIINYVQSLQRQ+EFLSMKLA V+PR+D+N+ LL+K++
Sbjct: 68 AVMLDEIINYVQSLQRQIEFLSMKLAAVDPRLDINLLNLLNKEV 111
>gi|297734057|emb|CBI15304.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/128 (63%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
Query: 242 VAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPK-DYIHVRARRGQATDSHSLAERVR 300
++ P+++ +++ + + K + SKP E K DYIHVRARRGQATDSHSLAER R
Sbjct: 101 ISRTPDENGGSKAELEASSVAGEKPAEESKPAEQSKQDYIHVRARRGQATDSHSLAERAR 160
Query: 301 REKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNM 360
REKISERMK LQDLVPGCNKV GKA++LDEIINY+QSLQRQVEFLSMKL VN RM+ +
Sbjct: 161 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNHTV 220
Query: 361 EALLSKDL 368
E KDL
Sbjct: 221 EGFPLKDL 228
>gi|413933172|gb|AFW67723.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 284
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/235 (42%), Positives = 139/235 (59%), Gaps = 35/235 (14%)
Query: 229 KAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQ 288
+ K +P V N + S M+SK+D + D +K +DY+H+RA+RGQ
Sbjct: 64 QTKGSPQPERNSVEEGNRKISPKMQSKEDSSDGDGTK-----------EDYVHIRAKRGQ 112
Query: 289 ATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMK 348
AT+SHSLAER+RR+KISERMK LQDLVPGC+K+TGKAVMLDEIINYVQSLQRQVEFLSMK
Sbjct: 113 ATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMK 172
Query: 349 LATVNPRMDLNMEALLSKDLF--QSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGI 406
LATVNP + ++E ++SK + Q + + PG + T P Q + + I
Sbjct: 173 LATVNPELGFDIEQIISKQMLLSQDRHLAFYGVEPGSSGL-TGPFNQGIMQPELMCT--I 229
Query: 407 NNNAENQFSINALNSSLHRNHNIQLPPINGHGEVGPRVPSLWDDDLQSLVQMGFN 461
N ++ L+ ++H + +PS+W + LQ++ QM FN
Sbjct: 230 AN------PVDVLHGAIHDASTMN------------HIPSMW-EGLQNMPQMNFN 265
>gi|255540845|ref|XP_002511487.1| DNA binding protein, putative [Ricinus communis]
gi|223550602|gb|EEF52089.1| DNA binding protein, putative [Ricinus communis]
Length = 275
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/198 (51%), Positives = 119/198 (60%), Gaps = 26/198 (13%)
Query: 200 KEGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSK---- 255
++GS +T Q+V RKR+ E+ +DSN R K
Sbjct: 52 RDGSVEESTVTEQSV--GGGRKRRDF--SSEDESSKMVSTSSSGNELQDSNVKRMKISGS 107
Query: 256 QDEN-----------KSDSSKTKDNSKPVEPPK-DYIHVRARRGQATDSHSLAERVRREK 303
Q+EN +D + + NSK EPPK DYIHVRARRGQATDSHSLAER RREK
Sbjct: 108 QNENGKSKAEVEASSANDKNAAEQNSKISEPPKQDYIHVRARRGQATDSHSLAERARREK 167
Query: 304 ISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLN--ME 361
ISERMK LQDLVPGCNKV GKA++LDEIINY+QSLQRQVEFLSMKL VN RM +N +E
Sbjct: 168 ISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMGMNPTVE 227
Query: 362 ALLSKDL----FQSCGYV 375
KD F + G +
Sbjct: 228 GFHPKDADAQPFDATGMI 245
>gi|297843798|ref|XP_002889780.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335622|gb|EFH66039.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 140
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/134 (64%), Positives = 110/134 (82%), Gaps = 5/134 (3%)
Query: 240 KVVAENPEDSNSMRSK-QDENKSDSSKT---KDNSKPVEPPKD-YIHVRARRGQATDSHS 294
K V E ED S + Q ++K+D SK K++S+ E PK+ YIH+RARRGQAT+SHS
Sbjct: 1 KAVEEFQEDPQSGSDQSQKKHKNDQSKETMNKESSQNEEEPKEKYIHMRARRGQATNSHS 60
Query: 295 LAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 354
LAERVRREKISERM+ LQ+LVPGCNK+TGKA MLDEIINY+QSLQ+QVEFLSMKLATVNP
Sbjct: 61 LAERVRREKISERMRLLQELVPGCNKITGKAFMLDEIINYIQSLQQQVEFLSMKLATVNP 120
Query: 355 RMDLNMEALLSKDL 368
++++++ +L+KD+
Sbjct: 121 DINIDIDRILAKDV 134
>gi|212723614|ref|NP_001131789.1| uncharacterized protein LOC100193160 [Zea mays]
gi|194692538|gb|ACF80353.1| unknown [Zea mays]
gi|414872589|tpg|DAA51146.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/270 (41%), Positives = 160/270 (59%), Gaps = 45/270 (16%)
Query: 204 SLSEQITSQTVTDSNPRKRKSIQR-----PKA--KETPPTSDPK---VVAENPEDSNSMR 253
+LS I +KRK ++ P A ++T +S P+ + N + S ++
Sbjct: 61 TLSHDIQMSDEHSGGVKKRKGVEDCVTLLPNAGDQQTEGSSQPERNSMEEGNRKISPKIQ 120
Query: 254 SKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQD 313
SK+D + D +K +DY+H+RA+RGQAT+SHSLAER+RR+KISERMK LQD
Sbjct: 121 SKEDSSDGDGTK-----------EDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQD 169
Query: 314 LVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLF--QS 371
LVPGC+K+TGKAVMLDEIINYVQSLQRQVEFLSMKL+TVNP + ++E ++SK + Q
Sbjct: 170 LVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPELGFDIEQIISKQMMLSQD 229
Query: 372 CGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQL 431
+ + PG S+ T P Q + + + I+N A+ L+ ++H +
Sbjct: 230 RHLAFYGVDPGSSSL-TAPFNQGIVQPAMMCN--ISNPAD------VLHGTIH-----DV 275
Query: 432 PPINGHGEVGPRVPSLWDDDLQSLVQMGFN 461
+N ++PS+W + LQS+ QM FN
Sbjct: 276 STMN-------QIPSMW-EGLQSMPQMNFN 297
>gi|414872588|tpg|DAA51145.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 209
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 140/219 (63%), Gaps = 35/219 (15%)
Query: 245 NPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKI 304
N + S ++SK+D + D +K +DY+H+RA+RGQAT+SHSLAER+RR+KI
Sbjct: 5 NRKISPKIQSKEDSSDGDGTK-----------EDYVHIRAKRGQATNSHSLAERLRRKKI 53
Query: 305 SERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALL 364
SERMK LQDLVPGC+K+TGKAVMLDEIINYVQSLQRQVEFLSMKL+TVNP + ++E ++
Sbjct: 54 SERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPELGFDIEQII 113
Query: 365 SKDLF--QSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSS 422
SK + Q + + PG S+ T P Q + + + I+N A+ L+ +
Sbjct: 114 SKQMMLSQDRHLAFYGVDPGSSSL-TAPFNQGIVQPAMMCN--ISNPAD------VLHGT 164
Query: 423 LHRNHNIQLPPINGHGEVGPRVPSLWDDDLQSLVQMGFN 461
+H + +N ++PS+W + LQS+ QM FN
Sbjct: 165 IH-----DVSTMN-------QIPSMW-EGLQSMPQMNFN 190
>gi|18406408|ref|NP_564749.1| transcription factor BPE [Arabidopsis thaliana]
gi|28393152|gb|AAO42009.1| putative bHLH protein [Arabidopsis thaliana]
gi|28827506|gb|AAO50597.1| putative bHLH protein [Arabidopsis thaliana]
gi|113431918|emb|CAK32498.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195476|gb|AEE33597.1| transcription factor BPE [Arabidopsis thaliana]
Length = 264
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 79/115 (68%), Positives = 91/115 (79%)
Query: 258 ENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPG 317
E +S ++T+ + +EP KDYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPG
Sbjct: 112 EAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG 171
Query: 318 CNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSC 372
CNKV GKA++LDEIINY+QSLQRQVEFLSMKL VN RM+ +E K+ Q
Sbjct: 172 CNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGIEVFPPKEFGQQA 226
>gi|21592490|gb|AAM64440.1| unknown [Arabidopsis thaliana]
Length = 264
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 79/115 (68%), Positives = 91/115 (79%)
Query: 258 ENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPG 317
E +S ++T+ + +EP KDYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPG
Sbjct: 112 EAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG 171
Query: 318 CNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSC 372
CNKV GKA++LDEIINY+QSLQRQVEFLSMKL VN RM+ +E K+ Q
Sbjct: 172 CNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGIEVFPPKEFGQQA 226
>gi|147774847|emb|CAN69076.1| hypothetical protein VITISV_004761 [Vitis vinifera]
Length = 302
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/124 (68%), Positives = 97/124 (78%), Gaps = 9/124 (7%)
Query: 256 QDENKSDSSKTKDNS-KPVE-------PPK-DYIHVRARRGQATDSHSLAERVRREKISE 306
+DEN+ ++ + +S KPVE PPK D+IHVRARRGQATDSHSLAER RREKISE
Sbjct: 116 RDENRDSKTEVETSSGKPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISE 175
Query: 307 RMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSK 366
RMK LQDLVPGCNKV GKA++LDEIINY+QSLQRQVEFLSMKL VN RM+ +E SK
Sbjct: 176 RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNSGIEGFPSK 235
Query: 367 DLFQ 370
D Q
Sbjct: 236 DFGQ 239
>gi|159505446|gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]
Length = 370
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/129 (66%), Positives = 97/129 (75%), Gaps = 4/129 (3%)
Query: 236 TSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPV--EPPKDYIHVRARRGQATDSH 293
+ DP+ V + ++ + E K +S K D+ K V EPPKDYIHVRARRGQATDSH
Sbjct: 136 SKDPREVKSKKQKKGNVNDAKKEEKENSPKA-DSEKKVAKEPPKDYIHVRARRGQATDSH 194
Query: 294 SLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 353
SLAERVRREKISERMK LQ LVPGC+KVTGKA MLDEIINYVQ LQ QVEFLSMKLA+VN
Sbjct: 195 SLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVN 254
Query: 354 PRM-DLNME 361
P D M+
Sbjct: 255 PMFYDFGMD 263
>gi|224107851|ref|XP_002314625.1| predicted protein [Populus trichocarpa]
gi|222863665|gb|EEF00796.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/118 (68%), Positives = 91/118 (77%), Gaps = 1/118 (0%)
Query: 255 KQDENKSDSSKTKDNSKPVEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQD 313
K + S + ++P EP K DYIHVRARRGQATDSHSLAER RREKISERMK LQD
Sbjct: 46 KHEAEPSSGKHVEHKTQPPEPSKQDYIHVRARRGQATDSHSLAERARREKISERMKILQD 105
Query: 314 LVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQS 371
LVPGCNKV GKA++LDEIINY+QSLQRQVEFLSMKL VN RM+ +E SKD Q+
Sbjct: 106 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNTRMNPGIEVFASKDFGQT 163
>gi|339716200|gb|AEJ88339.1| putative MYC protein [Tamarix hispida]
Length = 301
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 96/188 (51%), Positives = 122/188 (64%), Gaps = 14/188 (7%)
Query: 195 NNADSKEGSSLSEQITSQTVTDSNPRKRKSI--QRPKAKETPPTSDPKVVAENPE----- 247
N S E S+++EQ S RKRK + + +K T+ + EN +
Sbjct: 72 NRDGSIEESTVTEQSGSHG--GGGCRKRKDVISEDESSKLVSATTSANELTENGKRMKIS 129
Query: 248 ----DSNSMRSKQDENKSDSSKTKD-NSKPVEPPKDYIHVRARRGQATDSHSLAERVRRE 302
++N ++ + + S K+ + +S+P EPPKDYIHVRARRGQATDSHSLAER RRE
Sbjct: 130 GSRYENNGSKTGIEASSSGGGKSAEKSSQPPEPPKDYIHVRARRGQATDSHSLAERARRE 189
Query: 303 KISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEA 362
KISERMK LQDLVPGCNKV GKA++LDEIINY+QSLQRQVEFLSMKL VN ++ +
Sbjct: 190 KISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEVVNSGVNPAINC 249
Query: 363 LLSKDLFQ 370
SKD+ Q
Sbjct: 250 FPSKDVNQ 257
>gi|297837577|ref|XP_002886670.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
gi|297332511|gb|EFH62929.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 79/113 (69%), Positives = 90/113 (79%)
Query: 258 ENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPG 317
E +S ++T+ +EP KDYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPG
Sbjct: 112 EAESLGTETEQKKLQIEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG 171
Query: 318 CNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQ 370
CNKV GKA++LDEIINY+QSLQRQVEFLSMKL VN RM+ +E K+ Q
Sbjct: 172 CNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGIEVFPPKEFGQ 224
>gi|356500821|ref|XP_003519229.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 260
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 81/114 (71%), Positives = 87/114 (76%), Gaps = 1/114 (0%)
Query: 258 ENKSDSSKTKDNSKPVEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVP 316
EN S + P EPPK DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVP
Sbjct: 108 ENSSGKPAEQSGKPPSEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKTLQDLVP 167
Query: 317 GCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQ 370
GCNKV GKA++LDEIINY+QSLQRQ EFLSMKL VN RM+ +E KD Q
Sbjct: 168 GCNKVIGKALVLDEIINYIQSLQRQAEFLSMKLEAVNSRMESGIEVFPPKDFDQ 221
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 91/170 (53%), Positives = 112/170 (65%), Gaps = 9/170 (5%)
Query: 201 EGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENK 260
E LS+ +++ + + P+AK P ++ + ++S+R++ +
Sbjct: 52 EDDDLSKVVSTSAASGGGGGGGQDSDAPEAKRLKPM-------KSSDKNDSLRTEAGTDS 104
Query: 261 SDSSKTKD-NSKPVEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC 318
+SSK D N+ P EPPK DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGC
Sbjct: 105 GNSSKAADKNATPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 164
Query: 319 NKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
NKV GKA +LDEIINY+QSLQ QVEFLSMKL VN M + A SKD
Sbjct: 165 NKVIGKASVLDEIINYIQSLQHQVEFLSMKLEAVNSHMINGIVAFPSKDF 214
>gi|8778763|gb|AAF79771.1|AC009317_30 T30E16.21 [Arabidopsis thaliana]
Length = 348
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/111 (70%), Positives = 91/111 (81%)
Query: 258 ENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPG 317
E +S ++T+ + +EP KDYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPG
Sbjct: 106 EAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG 165
Query: 318 CNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
CNKV GKA++LDEIINY+QSLQRQVEFLSMKL VN RM+ +E K++
Sbjct: 166 CNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGIEVFPPKEV 216
>gi|356526880|ref|XP_003532044.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 273
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/109 (73%), Positives = 89/109 (81%), Gaps = 2/109 (1%)
Query: 266 TKDNSKPV-EPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 323
+ ++KP EPPK DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNKV G
Sbjct: 128 AEQSAKPASEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG 187
Query: 324 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSC 372
KA++LDEIINY+QSLQRQVEFLSMKL VN R++ +EA KD Q
Sbjct: 188 KALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNSGIEAFPPKDFGQQA 236
>gi|356500809|ref|XP_003519223.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 255
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 106/158 (67%), Gaps = 6/158 (3%)
Query: 219 PRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMR---SKQDENKSDSSKTKDNSK--PV 273
P+KR+ + + + T S V E D ++ S + E +S S K S P
Sbjct: 59 PKKRRQAEEEEVESTRGASTTNAVDEGCGDGKRVKTSESGKGEGESCSGKPAKQSGKPPS 118
Query: 274 EPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEII 332
EPPK DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNKV GKA++LDEII
Sbjct: 119 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 178
Query: 333 NYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQ 370
NY+QSLQRQVEFLSMKL VN R+ +E KD Q
Sbjct: 179 NYIQSLQRQVEFLSMKLEAVNSRIAPGIEVFPPKDFDQ 216
>gi|356509797|ref|XP_003523632.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 376
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/108 (72%), Positives = 95/108 (87%), Gaps = 5/108 (4%)
Query: 260 KSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCN 319
K D S++++ SK +++IHVRARRGQAT+SHSLAERVRREKISERM+ LQ+LVPGC+
Sbjct: 214 KKDDSESEEGSK-----ENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCD 268
Query: 320 KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKD 367
K TGKAVMLDEIINYVQSLQ+QVEFLSMKLATVNP+++ N+E + SKD
Sbjct: 269 KKTGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPQLNFNVEQICSKD 316
>gi|449458041|ref|XP_004146756.1| PREDICTED: transcription factor BPE-like [Cucumis sativus]
Length = 298
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/115 (70%), Positives = 91/115 (79%), Gaps = 2/115 (1%)
Query: 258 ENKSDSSKTKDNSKPV--EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLV 315
E + S KT+ NS+P +P +DYIHVRARRGQATDSHSLAER RREKISERMK LQDLV
Sbjct: 145 EAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLV 204
Query: 316 PGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQ 370
PGCNKV GKA++LDEIINY+QSLQRQVEFLSMKL VN R+ +E KD Q
Sbjct: 205 PGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKDYGQ 259
>gi|449533777|ref|XP_004173848.1| PREDICTED: transcription factor BPE-like, partial [Cucumis sativus]
Length = 174
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 89/110 (80%), Gaps = 2/110 (1%)
Query: 263 SSKTKDNSKPV--EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNK 320
S KT+ NS+P +P +DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK
Sbjct: 26 SGKTEQNSQPTPEQPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 85
Query: 321 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQ 370
V GKA++LDEIINY+QSLQRQVEFLSMKL VN R+ +E KD Q
Sbjct: 86 VIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKDYGQ 135
>gi|6520231|dbj|BAA87957.1| helix-loop-helix protein homolog [Arabidopsis thaliana]
Length = 318
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/111 (70%), Positives = 91/111 (81%)
Query: 258 ENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPG 317
E +S ++T+ + +EP KDYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPG
Sbjct: 112 EAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG 171
Query: 318 CNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
CNKV GKA++LDEIINY+QSLQRQVEFLSMKL VN RM+ +E K++
Sbjct: 172 CNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGIEVFPPKEV 222
>gi|356516734|ref|XP_003527048.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 269
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 104/136 (76%), Gaps = 8/136 (5%)
Query: 248 DSNSMRSKQDENKSDSSKTKDNS-KPVEPPK-DYIHVRARRGQATDSHSLAERVRREKIS 305
+++ +++ + + + +K+ + S KP E PK DYIHVRARRGQATDSHSLAER RREKIS
Sbjct: 103 ENDGFKAEAEASSAGGNKSSEQSNKPCEAPKQDYIHVRARRGQATDSHSLAERARREKIS 162
Query: 306 ERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLN--MEAL 363
ERMK LQDLVPGCNKV GKA++LDEIINY+QSLQRQVEFLSMKL VN RM++N ++
Sbjct: 163 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNMNPTIDGF 222
Query: 364 LSKDL----FQSCGYV 375
SKD+ F G V
Sbjct: 223 PSKDVGTQPFDIAGMV 238
>gi|30696324|ref|NP_849829.1| transcription factor BPE [Arabidopsis thaliana]
gi|122222656|sp|Q0JXE7.1|BPE_ARATH RecName: Full=Transcription factor BPE; AltName: Full=Basic
helix-loop-helix protein 31; Short=AtbHLH31; Short=bHLH
31; AltName: Full=Protein BIG PETAL; AltName:
Full=Transcription factor EN 88; AltName: Full=bHLH
transcription factor bHLH031
gi|113431920|emb|CAK32499.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195477|gb|AEE33598.1| transcription factor BPE [Arabidopsis thaliana]
Length = 343
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/111 (70%), Positives = 91/111 (81%)
Query: 258 ENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPG 317
E +S ++T+ + +EP KDYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPG
Sbjct: 112 EAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG 171
Query: 318 CNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
CNKV GKA++LDEIINY+QSLQRQVEFLSMKL VN RM+ +E K++
Sbjct: 172 CNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGIEVFPPKEV 222
>gi|302774124|ref|XP_002970479.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
gi|302793582|ref|XP_002978556.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300153905|gb|EFJ20542.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300161995|gb|EFJ28609.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
Length = 125
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/104 (77%), Positives = 90/104 (86%), Gaps = 1/104 (0%)
Query: 254 SKQDENKSDSSKTKDNSKP-VEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQ 312
S+ EN ++S+ K+NSKP +DYIHVRARRGQATDSHSLAERVRREKISERMK LQ
Sbjct: 4 SESTENTTNSNLGKENSKPGAGNTQDYIHVRARRGQATDSHSLAERVRREKISERMKTLQ 63
Query: 313 DLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM 356
DLVPGC+KVTGKA+MLDEIINYVQSLQRQVEFLSMKLA V P +
Sbjct: 64 DLVPGCSKVTGKAMMLDEIINYVQSLQRQVEFLSMKLAAVKPAL 107
>gi|351720977|ref|NP_001237962.1| uncharacterized protein LOC100306638 [Glycine max]
gi|255629145|gb|ACU14917.1| unknown [Glycine max]
Length = 240
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/134 (64%), Positives = 96/134 (71%), Gaps = 17/134 (12%)
Query: 271 KPVEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLD 329
KP E PK DYIHVRARRGQATDSHSLAER RREKISERMK LQDL PGCNKV GKA++LD
Sbjct: 102 KPCEAPKPDYIHVRARRGQATDSHSLAERARREKISERMKILQDLAPGCNKVIGKALVLD 161
Query: 330 EIINYVQSLQRQVEFLSMKLATVNPRMDLN--MEALLSKD-----------LFQSC---G 373
EIINY+QSLQRQVEFLSMKL VN RM+ N ++ SKD +F S G
Sbjct: 162 EIINYIQSLQRQVEFLSMKLEAVNSRMNTNPTIDGFPSKDVGTQPFDIAGMVFGSQAARG 221
Query: 374 YVQHSLYPGDCSVQ 387
Y Q S +PG +Q
Sbjct: 222 YAQGSSHPGWLHMQ 235
>gi|158147058|gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147060|gb|ABW22631.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147061|gb|ABW22632.1| bHLH transcription factor Upa20 [Capsicum annuum]
Length = 340
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/187 (51%), Positives = 115/187 (61%), Gaps = 17/187 (9%)
Query: 192 ESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNS 251
+ N N +K SS+S + S +VTD + +P T P + E S
Sbjct: 70 DQNTNVTNKSSSSISLDMDSSSVTD---KMESGNNKPNV--TSPMDKKRKSREGSSSMTS 124
Query: 252 MRSKQDENKSDSSKTKDNSKPV---------EPPKDYIHVRARRGQATDSHSLAERVRRE 302
SK + K K NSK V E P YIHVRARRGQATDSHSLAERVRRE
Sbjct: 125 ANSKNVTQGDNGKKNKSNSKLVAKDEKKANEEAPTGYIHVRARRGQATDSHSLAERVRRE 184
Query: 303 KISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR---MDLN 359
KISERMK LQ LVPGC+KVTGKA+MLDEIINYVQSLQ QVEFLSMKLA++NP ++
Sbjct: 185 KISERMKMLQSLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLNPMYYDFGMD 244
Query: 360 MEALLSK 366
++AL+ +
Sbjct: 245 LDALMVR 251
>gi|357141712|ref|XP_003572320.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 327
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/155 (54%), Positives = 104/155 (67%), Gaps = 31/155 (20%)
Query: 246 PEDSNSMRSKQDE-NKSDSSKTKDNSKPVEPPKD-------------------------- 278
P DS R + DE + +D +KT + ++ E KD
Sbjct: 81 PADSKKKRRRSDEVSGTDHAKTSNGAEETERGKDAKGEEEAGPAAAAATGQSKGKGAGER 140
Query: 279 ----YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINY 334
Y+HVRAR QAT+SHS+AE++RREKISERMK LQDLVPGC+KVTGKAVMLDEIINY
Sbjct: 141 QKEGYVHVRARSEQATNSHSIAEKLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINY 200
Query: 335 VQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLF 369
VQSLQRQVEFLSMKL+TVNPR+ +++E LL+KD+
Sbjct: 201 VQSLQRQVEFLSMKLSTVNPRLGVDIELLLAKDIL 235
>gi|356498105|ref|XP_003517894.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 264
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/120 (68%), Positives = 92/120 (76%), Gaps = 3/120 (2%)
Query: 254 SKQDENKSDSSKTKDNSK--PVEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKF 310
S + E ++ S K + S P EPPK DYIHVRARRGQATDSHSLAER RREKISERMK
Sbjct: 106 SGKGEGETSSGKLAEQSGKPPSEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKI 165
Query: 311 LQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQ 370
LQD+VPGCNKV GKA++LDEIINY+QSLQRQVEFLSMKL VN R+ +E KD Q
Sbjct: 166 LQDIVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLAPRIEVFPPKDFDQ 225
>gi|18398703|ref|NP_565434.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|15724318|gb|AAL06552.1|AF412099_1 At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|18700242|gb|AAL77731.1| At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|20197806|gb|AAD15506.2| expressed protein [Arabidopsis thaliana]
gi|330251658|gb|AEC06752.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 335
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/151 (54%), Positives = 102/151 (67%), Gaps = 4/151 (2%)
Query: 223 KSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQD----ENKSDSSKTKDNSKPVEPPKD 278
K+ ++P+ K K + E +SM+ K + E SD+SK D
Sbjct: 122 KNKRKPEVKTREEQKTEKKIKVEAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLD 181
Query: 279 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 338
YIHVRARRGQATD HSLAER RREKIS++MK+LQD+VPGCNKVTGKA MLDEIINYVQ L
Sbjct: 182 YIHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCL 241
Query: 339 QRQVEFLSMKLATVNPRMDLNMEALLSKDLF 369
QRQVEFLSMKLA +NP ++L +E + K +
Sbjct: 242 QRQVEFLSMKLAVLNPELELAVEDVSVKQAY 272
>gi|30680338|ref|NP_849976.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|218563534|sp|Q9ZPW3.3|BH064_ARATH RecName: Full=Transcription factor bHLH64; AltName: Full=Basic
helix-loop-helix protein 64; Short=AtbHLH64; Short=bHLH
64; AltName: Full=Transcription factor EN 79; AltName:
Full=bHLH transcription factor bHLH064
gi|330251659|gb|AEC06753.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 337
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 82/143 (57%), Positives = 99/143 (69%), Gaps = 4/143 (2%)
Query: 223 KSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQD----ENKSDSSKTKDNSKPVEPPKD 278
K+ ++P+ K K + E +SM+ K + E SD+SK D
Sbjct: 122 KNKRKPEVKTREEQKTEKKIKVEAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLD 181
Query: 279 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 338
YIHVRARRGQATD HSLAER RREKIS++MK+LQD+VPGCNKVTGKA MLDEIINYVQ L
Sbjct: 182 YIHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCL 241
Query: 339 QRQVEFLSMKLATVNPRMDLNME 361
QRQVEFLSMKLA +NP ++L +E
Sbjct: 242 QRQVEFLSMKLAVLNPELELAVE 264
>gi|334184293|ref|NP_001189548.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|330251660|gb|AEC06754.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 364
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 115/191 (60%), Gaps = 8/191 (4%)
Query: 223 KSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQD----ENKSDSSKTKDNSKPVEPPKD 278
K+ ++P+ K K + E +SM+ K + E SD+SK D
Sbjct: 122 KNKRKPEVKTREEQKTEKKIKVEAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLD 181
Query: 279 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 338
YIHVRARRGQATD HSLAER RREKIS++MK+LQD+VPGCNKVTGKA MLDEIINYVQ L
Sbjct: 182 YIHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCL 241
Query: 339 QRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQG 398
QRQVEFLSMKLA +NP ++L +E + K V S V FP QQG
Sbjct: 242 QRQVEFLSMKLAVLNPELELAVEDVSVKQFQAYFTNVVASKQSIMVDVPLFP---LDQQG 298
Query: 399 SHLTSSGINNN 409
S L S IN N
Sbjct: 299 S-LDLSAINPN 308
>gi|20127068|gb|AAM10953.1|AF488597_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 320
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 115/191 (60%), Gaps = 8/191 (4%)
Query: 223 KSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQD----ENKSDSSKTKDNSKPVEPPKD 278
K+ ++P+ K K + E +SM+ K + E SD+SK D
Sbjct: 105 KNKRKPEVKTREEQKTEKKIKVEAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLD 164
Query: 279 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 338
YIHVRARRGQATD HSLAER RREKIS++MK+LQD+VPGCNKVTGKA MLDEIINYVQ L
Sbjct: 165 YIHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCL 224
Query: 339 QRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQG 398
QRQVEFLSMKLA +NP ++L +E + K V S V FP QQG
Sbjct: 225 QRQVEFLSMKLAVLNPELELAVEDVSVKQFQAYFTNVVASKQSIMVDVPLFP---LDQQG 281
Query: 399 SHLTSSGINNN 409
S L S IN N
Sbjct: 282 S-LDSFAINPN 291
>gi|224133354|ref|XP_002321546.1| predicted protein [Populus trichocarpa]
gi|222868542|gb|EEF05673.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/136 (63%), Positives = 104/136 (76%), Gaps = 8/136 (5%)
Query: 248 DSNSMRSKQDENKSDSSKTKD-NSKPVEPPK-DYIHVRARRGQATDSHSLAERVRREKIS 305
++N R++ + + + ++KT + +SKP EPPK DYIHVRARRGQATDSHSLAER RREKIS
Sbjct: 48 ENNDSRAETEASSAANNKTAEQSSKPSEPPKQDYIHVRARRGQATDSHSLAERARREKIS 107
Query: 306 ERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLN--MEAL 363
ERM LQDLVPGCNKV GKA++LDEIINY+QSLQ QVEFLSMKL VN RM+ + E L
Sbjct: 108 ERMNMLQDLVPGCNKVIGKALVLDEIINYIQSLQCQVEFLSMKLEAVNSRMNTSPTTEHL 167
Query: 364 LSKDL----FQSCGYV 375
KDL F + G +
Sbjct: 168 HPKDLGAQPFVATGMI 183
>gi|224122148|ref|XP_002318764.1| predicted protein [Populus trichocarpa]
gi|222859437|gb|EEE96984.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 122/209 (58%), Gaps = 13/209 (6%)
Query: 154 FAERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQT 213
F E + S + +S VS SD++ + ST S + G +++++T
Sbjct: 56 FHEAPLDVRFHEFSHHDHSSKVSLSDNETSLTKKQSTGSSTVVDKLETGEQVTQEVT--- 112
Query: 214 VTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPV 273
P RK + + + D K V + KQ+E + + K P
Sbjct: 113 -----PVDRKRKTTNGSLNSAQSKDVKEVKSKRQKKCRGDMKQEEKRPKAVK----KVPE 163
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
EPP Y+HVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC+KVTGKA+MLDEIIN
Sbjct: 164 EPPTGYVHVRARRGQATDSHSLAERVRREKISERMKMLQRLVPGCDKVTGKALMLDEIIN 223
Query: 334 YVQSLQRQVEFLSMKLATVNPRM-DLNME 361
YVQSLQ QVEFLSMKLA+VNP D ME
Sbjct: 224 YVQSLQNQVEFLSMKLASVNPMFYDFGME 252
>gi|390979910|gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
Length = 330
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/287 (41%), Positives = 157/287 (54%), Gaps = 46/287 (16%)
Query: 198 DSKEGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQD 257
D K SS+S + + +VTD + I KA +P K + +++ SK +
Sbjct: 64 DPKSSSSISLDMDASSVTD---KIESGINNNKANVSPLDKKRKSSEGSSSMTSA-HSKNE 119
Query: 258 ENKSDSSKTKDNSKPV---------EPPKDYIHVRARRGQATDSHSLAERVRREKISERM 308
+ + K K NSK V E P YIHVRARRGQATDSHSLAERVRREKISERM
Sbjct: 120 KQGDNGKKKKINSKLVAKDEKKANEEAPTGYIHVRARRGQATDSHSLAERVRREKISERM 179
Query: 309 KFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR---MDLNMEALLS 365
K LQ LVPGC+KVTGKA+MLDEIINYVQSLQ QVEFLSMKL ++NP ++++AL+
Sbjct: 180 KILQSLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLTSLNPMYYDFGMDLDALMV 239
Query: 366 KDLFQSCGYVQHSLYPGDCSVQTFPSRY-QPQQGSHLTSSG-----INNNAENQFSINAL 419
+ P D S+ ++ QQGS T+S N N+ QF N+
Sbjct: 240 R--------------PDDQSLSGLETQMANIQQGSTTTTSQAAEVIANTNSGYQFLDNST 285
Query: 420 NSSLHRNHNIQLPPINGHGEVGPRVPSLW--DDDLQSLV-QMGFNQN 463
+ ++H P G G++ LW D+ Q ++ Q GF+ N
Sbjct: 286 SLMFQQSHFPNSIP-QGIGQL------LWGADEQTQKIINQSGFSNN 325
>gi|312283223|dbj|BAJ34477.1| unnamed protein product [Thellungiella halophila]
Length = 342
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/155 (60%), Positives = 103/155 (66%), Gaps = 7/155 (4%)
Query: 258 ENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPG 317
E SD+SK DYIHVRARRGQATD HSLAER RREKIS++MK+LQDLVPG
Sbjct: 163 EASSDTSKEISKGASESQKLDYIHVRARRGQATDRHSLAERARREKISKKMKYLQDLVPG 222
Query: 318 CNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL---FQSCGY 374
CNKVTGKA MLDEIINYVQSLQRQVEFLSMKLA +NP ++L +E L K F +
Sbjct: 223 CNKVTGKAGMLDEIINYVQSLQRQVEFLSMKLAVLNPELELAVEDLSVKQFQAYFTNLPV 282
Query: 375 VQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNN 409
V S P V FP QQGS L S IN N
Sbjct: 283 VVDSKPPIMVDVPLFP---LDQQGS-LDLSVINPN 313
>gi|168023966|ref|XP_001764508.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684372|gb|EDQ70775.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 679
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/256 (44%), Positives = 139/256 (54%), Gaps = 48/256 (18%)
Query: 238 DPKVVAENPEDSNSMRSKQDENKSDSS-------------------KTKDNSKPVEPPK- 277
DPKV + E+S + R K ++ KSD + ++N K E K
Sbjct: 326 DPKV--GDVENSKAKRCKGEDTKSDCKGERSSSEISSESAGSPKVPQKENNQKAKEFSKQ 383
Query: 278 DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQS 337
DYIHVRARRGQATDSHSLAERVRREKISERMK+LQDLVPGC KVTGKAVMLDEIINYVQS
Sbjct: 384 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQS 443
Query: 338 LQRQVEFLSMKLATVNPRMD--LNMEALLS-KDLFQSCGYVQHSLYPGDCSVQTFPSRYQ 394
LQRQVE LSMK+A+VNP L +E+ LS +D+ QS H + F S +
Sbjct: 444 LQRQVESLSMKVASVNPTHSGRLTLESRLSNEDIIQSQLSSIHGSSDSSINAAAFGSHHL 503
Query: 395 PQQGSHLTS-----SGINNNAENQFSINALNSSLHRNHNIQLPPINGHGEVGPRVPSL-- 447
QQ L + + N N F I++ H+ PPI E+ V S
Sbjct: 504 QQQSELLLNVYCGFDHLQANLGNCFDISS--------HHTTNPPIGRLAEMQSMVRSFDN 555
Query: 448 --------WDDDLQSL 455
WD QS+
Sbjct: 556 NLVSQSSGWDGSPQSV 571
>gi|295913405|gb|ADG57955.1| transcription factor [Lycoris longituba]
Length = 186
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/101 (75%), Positives = 84/101 (83%), Gaps = 1/101 (0%)
Query: 269 NSKPVEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVM 327
N++P+E PK DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNKV GKA +
Sbjct: 45 NTQPLEAPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASV 104
Query: 328 LDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
LDEIINY+Q+LQRQVEFLSMKL VN R + +E KD
Sbjct: 105 LDEIINYIQALQRQVEFLSMKLEAVNSRTNSGIEGFPPKDF 145
>gi|449437607|ref|XP_004136583.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
gi|449501894|ref|XP_004161487.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
Length = 369
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/155 (52%), Positives = 109/155 (70%), Gaps = 11/155 (7%)
Query: 213 TVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKP 272
T TDSNP +++ SDP V N + S + ++ + + + K+K+ S
Sbjct: 143 TDTDSNPNPLQTL----------ISDPTVENTN-QRSAKRKEREKKGRGSTKKSKNESNE 191
Query: 273 VEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEII 332
Y+HVRARRGQATDSHSLAER RREKI+ RMK LQ+LVPGCNK++G A++LDEII
Sbjct: 192 DAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEII 251
Query: 333 NYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKD 367
N+VQSLQRQVEFLSM+LA VNPR+D N+E++L+ +
Sbjct: 252 NHVQSLQRQVEFLSMRLAAVNPRVDFNIESILATE 286
>gi|125526611|gb|EAY74725.1| hypothetical protein OsI_02616 [Oryza sativa Indica Group]
Length = 467
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 135/408 (33%), Positives = 184/408 (45%), Gaps = 94/408 (23%)
Query: 118 CYSTPLNSP-------PLPKLNLSMIRGSKSSNNLPIPAADPGFAERAARLSCFAG---- 166
CYSTP+ SP P+P L + AAD AERAAR+SC A
Sbjct: 91 CYSTPVGSPCKPAPAPPVPSL---------------LAAADAMIAERAARMSCLAAAGHG 135
Query: 167 ---------SQMNMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDS 217
SQ + +A +L S S+ ++ + GS + + ++
Sbjct: 136 GGKLSRAASSQSLLAEPAAAGGVHQLPASDGSSSDAPSRKRKAPGSKARGKDAATSIAKV 195
Query: 218 NPRKRKS---IQRPKAKET----PPTSDP-------KVVAENPEDSNSMRSKQDENKSDS 263
P S QR + ET P + +P K+ A+ D ++ D +
Sbjct: 196 LPLLSASPLQSQRRTSPETMVNFPQSPEPGTKAKKCKLSADAAGDEDTKPVAGDAGHGGN 255
Query: 264 SKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKI---------SERMKFLQDL 314
K K EPPKDYIHVRARRGQATDSHSLAERV + S + F +
Sbjct: 256 GKGKVLDAAGEPPKDYIHVRARRGQATDSHSLAERVNTAGVYAAIHNFVFSSILAFADAI 315
Query: 315 VPGCN-KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL----- 368
+ +VTGKAVMLDEIINYVQSLQRQVEFLSMKL+TVNP++D +++ + KD
Sbjct: 316 AAVFHLQVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPQLDFDVDNFIPKDANDPSM 375
Query: 369 ---------FQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINAL 419
Y PG C Y QG+ + S + + + +
Sbjct: 376 PAPLSLPPPPPPLSYSPEGASPGIC--------YASSQGTAMQSV-VTSTKHLETAPTFA 426
Query: 420 NSSLHRNHNIQLPPING----HGEVGPRVPSLWDDDLQSLVQMGFNQN 463
N +H I +P ++G H + G +W+DDLQS+VQMGF N
Sbjct: 427 N-----HHVIPVPSLDGFHSAHSQAG---SCMWEDDLQSVVQMGFRGN 466
>gi|297836564|ref|XP_002886164.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332004|gb|EFH62423.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 114/191 (59%), Gaps = 8/191 (4%)
Query: 223 KSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQD----ENKSDSSKTKDNSKPVEPPKD 278
K+ + P+ K K + E +SM+ K + E SD+SK D
Sbjct: 122 KNKRNPEVKTRGEEKTEKKIKVEAETESSMKGKSNMRNTEASSDTSKETSKKASEIQKLD 181
Query: 279 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 338
YIHVRARRGQATD HSLAER RREKIS++MK+LQD+VPGCNKVTGKA MLDEIINYVQ L
Sbjct: 182 YIHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCL 241
Query: 339 QRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQG 398
QRQVEFLSMKLA +NP ++L +E + K V S V FP QQG
Sbjct: 242 QRQVEFLSMKLAVLNPELELAVEDVSVKQFQAYFTNVVASKQSIMVDVPLFP---LDQQG 298
Query: 399 SHLTSSGINNN 409
S L S IN N
Sbjct: 299 S-LDLSAINPN 308
>gi|115477012|ref|NP_001062102.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|42408258|dbj|BAD09414.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113624071|dbj|BAF24016.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|125561978|gb|EAZ07426.1| hypothetical protein OsI_29678 [Oryza sativa Indica Group]
gi|125603820|gb|EAZ43145.1| hypothetical protein OsJ_27735 [Oryza sativa Japonica Group]
Length = 365
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 75/99 (75%), Positives = 90/99 (90%), Gaps = 2/99 (2%)
Query: 277 KDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQ 336
+ Y HVRAR+GQAT++HSLAER+RREKISERMK LQDLVPGC+KVTGKA+MLDEIINYVQ
Sbjct: 171 EGYSHVRARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQ 230
Query: 337 SLQRQVEFLSMKLATVNPRMDLNMEALL--SKDLFQSCG 373
SLQRQVEFLSMKL+ VNPR+DL++E+L+ SKD+ + G
Sbjct: 231 SLQRQVEFLSMKLSAVNPRIDLDIESLVNNSKDVLRFPG 269
>gi|413938470|gb|AFW73021.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 340
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 75/105 (71%), Positives = 87/105 (82%), Gaps = 1/105 (0%)
Query: 278 DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQS 337
DYIHVRARRGQATDSHSLAERVRRE+ISERM++LQ+LVPGC+KVTGKA MLDEIINYVQS
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 338 LQRQVEFLSMKLATVNPRMDLNM-EALLSKDLFQSCGYVQHSLYP 381
LQ+QVEFLSMK+A NP + ++ E L + L Q+CG L P
Sbjct: 202 LQKQVEFLSMKIAASNPVVSFDIVEDLFGRQLKQACGPAAGQLEP 246
>gi|168009958|ref|XP_001757672.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691366|gb|EDQ77729.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 159 bits (401), Expect = 4e-36, Method: Composition-based stats.
Identities = 74/83 (89%), Positives = 82/83 (98%)
Query: 277 KDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQ 336
+DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC+K+TGKAVML+EIINYVQ
Sbjct: 1 QDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLEEIINYVQ 60
Query: 337 SLQRQVEFLSMKLATVNPRMDLN 359
SLQRQ+EFLSMKLA V+PR+D+N
Sbjct: 61 SLQRQIEFLSMKLAAVDPRLDIN 83
>gi|413920794|gb|AFW60726.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 328
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 106/227 (46%), Positives = 128/227 (56%), Gaps = 22/227 (9%)
Query: 141 SSNNLPI-PAADPGFAERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNADS 199
S ++ P+ P G AERA RLSCF S + S AS LR ++ A +
Sbjct: 109 SCHSTPVAPCVLAGDAERAERLSCFPASGRKL--SRVASSQSLLR------EQAPAPAPA 160
Query: 200 KEGSSLSEQITSQTVTDSNPRKRK----SIQRPKAKETPPTSDPKVVAENPEDSNSMRSK 255
+ ++Q D RKRK S ++ KAKE T+ P+ + +
Sbjct: 161 PSPGAAAKQHAGDGACDGPCRKRKASGTSSKQSKAKEAVTTAPPESRETAETRAKKCKLS 220
Query: 256 QDENKS--------DSSKTKD-NSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISE 306
DE + S K K+ + EPPKDYIHVRARRGQATDSHSLAERVRREKI E
Sbjct: 221 TDEERKPAAGEGWRGSGKGKELVAADAEPPKDYIHVRARRGQATDSHSLAERVRREKIGE 280
Query: 307 RMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 353
RMK LQDLVPGC+KVTGKAVMLDEIINYVQSLQRQVE + L +
Sbjct: 281 RMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEVRRVCLLCIG 327
>gi|224029073|gb|ACN33612.1| unknown [Zea mays]
gi|413938471|gb|AFW73022.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/105 (71%), Positives = 87/105 (82%), Gaps = 1/105 (0%)
Query: 278 DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQS 337
DYIHVRARRGQATDSHSLAERVRRE+ISERM++LQ+LVPGC+KVTGKA MLDEIINYVQS
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 338 LQRQVEFLSMKLATVNPRMDLNM-EALLSKDLFQSCGYVQHSLYP 381
LQ+QVEFLSMK+A NP + ++ E L + L Q+CG L P
Sbjct: 202 LQKQVEFLSMKIAASNPVVSFDIVEDLFGRQLKQACGPAAGQLEP 246
>gi|357148647|ref|XP_003574844.1| PREDICTED: transcription factor bHLH137-like [Brachypodium
distachyon]
Length = 294
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 77/145 (53%), Positives = 103/145 (71%), Gaps = 6/145 (4%)
Query: 210 TSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDN 269
+S V D+ P+ S+ R + T S + + + +D +S++ + + K +
Sbjct: 59 SSSAVLDTYPQGSASVGRKRKASTADDSSATLSSAHSKDCKDGKSRRGK------REKSS 112
Query: 270 SKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLD 329
+ E PK YIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ LVPGC+KVTGKA++LD
Sbjct: 113 TDQEEAPKGYIHVRARRGQATDSHSLAERVRRERISERMRLLQTLVPGCDKVTGKALILD 172
Query: 330 EIINYVQSLQRQVEFLSMKLATVNP 354
EIINYVQSLQ QVEFLSM++A+++P
Sbjct: 173 EIINYVQSLQNQVEFLSMRIASMSP 197
>gi|255540091|ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
gi|223550225|gb|EEF51712.1| DNA binding protein, putative [Ricinus communis]
Length = 422
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 80/107 (74%), Positives = 87/107 (81%), Gaps = 3/107 (2%)
Query: 258 ENKSDSSKTKDNSK--PVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLV 315
E+K ++ KD K EPP YIHVRARRGQATDSHSLAERVRREKISERMK LQ LV
Sbjct: 146 EDKKPKAEKKDQKKVPDQEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKILQRLV 205
Query: 316 PGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM-DLNME 361
PGC+KVTGKA+MLDEIINYVQSLQ QVEFLSMKLA+VNP D M+
Sbjct: 206 PGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPLFYDFGMD 252
>gi|357119169|ref|XP_003561318.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 240
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/119 (66%), Positives = 93/119 (78%), Gaps = 2/119 (1%)
Query: 252 MRSKQDENKSDSSKTKD-NSKPVEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMK 309
+R+ + ++SK D N P EPPK DYIHVRARRGQATDSHS+AER RREKISERMK
Sbjct: 80 LRTNAQTDSGNASKVVDRNPTPPEPPKQDYIHVRARRGQATDSHSIAERARREKISERMK 139
Query: 310 FLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
LQDLVPGCNKV GKA +LDEIINY+Q+LQRQVEFLSMKL VN ++ + + SKD+
Sbjct: 140 MLQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLEAVNAHVNNRIASFQSKDV 198
>gi|102139897|gb|ABF70046.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 278
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 75/112 (66%), Positives = 86/112 (76%), Gaps = 2/112 (1%)
Query: 263 SSKTKDNSKPVEPPK--DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNK 320
+SK K + + PK DYIHVRARRGQATDSHSLAERVRRE+ISERMK+LQ+LVPGC+K
Sbjct: 111 TSKNKKKASGSDAPKETDYIHVRARRGQATDSHSLAERVRRERISERMKYLQELVPGCSK 170
Query: 321 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSC 372
+ GKA LDEIINYVQSLQRQVEFLSMKLA PRM L+ ++ C
Sbjct: 171 IMGKASTLDEIINYVQSLQRQVEFLSMKLAAAEPRMHLSSSNFFDREEVHGC 222
>gi|168024189|ref|XP_001764619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684197|gb|EDQ70601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 351
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/99 (75%), Positives = 85/99 (85%), Gaps = 1/99 (1%)
Query: 267 KDNSKPVEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKA 325
K K +PPK +IHVRARRGQATD HSLAER RREKIS RMKFLQ LVPGC++VTGKA
Sbjct: 134 KKVKKKEQPPKQGFIHVRARRGQATDGHSLAERARREKISNRMKFLQALVPGCSEVTGKA 193
Query: 326 VMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALL 364
VML+EIINYV+SLQRQ+EFLSMKLA V+PR+D N+E LL
Sbjct: 194 VMLEEIINYVKSLQRQIEFLSMKLAAVDPRVDTNVEGLL 232
>gi|297795891|ref|XP_002865830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311665|gb|EFH42089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/101 (76%), Positives = 87/101 (86%), Gaps = 1/101 (0%)
Query: 254 SKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQD 313
SK+ + S K K SK EPPKDYIHVRARRGQATDSHSLAERVRREKISERM+ LQ+
Sbjct: 110 SKEGVEGTKSKKQKRGSKE-EPPKDYIHVRARRGQATDSHSLAERVRREKISERMRTLQN 168
Query: 314 LVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 354
LVPGC+KVTGKA+MLDEIINYVQ+LQ QVEFLSMKL +++P
Sbjct: 169 LVPGCDKVTGKALMLDEIINYVQTLQNQVEFLSMKLTSISP 209
>gi|225456461|ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
gi|297734492|emb|CBI15739.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/241 (41%), Positives = 132/241 (54%), Gaps = 26/241 (10%)
Query: 148 PAADPGFAERAARLSCFA-------------------GSQMNMNSSVSASDSKKLRVSRS 188
P GF E +CF+ + + +S V+ SD++ +
Sbjct: 22 PIKMSGFMEEGNTTTCFSQFFPSESLHEVPADARVHESTSLQHSSKVTLSDNEPCVTQKL 81
Query: 189 STPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPED 248
ST +S++ D E L EQ+T + RKRKS + + +
Sbjct: 82 ST-DSSSVVDRLE---LGEQVTQKVAPIERERKRKSRDGSSLTSAQSKDAREGKGKKAKK 137
Query: 249 SNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERM 308
+ + +E + + K EPP YIHVRARRGQATDSHSLAERVRREKISERM
Sbjct: 138 GSGLVKDGEEEQLKADKKDQKKASEEPPTGYIHVRARRGQATDSHSLAERVRREKISERM 197
Query: 309 KFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR---MDLNMEALLS 365
K LQ LVPGC+KVTGKA+MLDEIINYVQSLQ QVEFLSMKLA+VNP ++++AL+
Sbjct: 198 KLLQALVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPMFYDFGMDLDALMV 257
Query: 366 K 366
+
Sbjct: 258 R 258
>gi|125546085|gb|EAY92224.1| hypothetical protein OsI_13945 [Oryza sativa Indica Group]
Length = 263
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/134 (60%), Positives = 100/134 (74%), Gaps = 2/134 (1%)
Query: 237 SDPKVVAENPEDSNSMRSKQDENKSDSSKTKDN--SKPVEPPKDYIHVRARRGQATDSHS 294
S+ K + D++S+R++ + + ++SK+ D P P +DYIHVRARRGQATDSHS
Sbjct: 87 SEAKRFKASKSDNSSLRTEAETDSRNASKSGDQNPPPPEPPKQDYIHVRARRGQATDSHS 146
Query: 295 LAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 354
LAER RREKISERMK LQDLVPGCNKV GKA +LDEIINY+Q+LQRQVEFLSMKL VN
Sbjct: 147 LAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLEAVNA 206
Query: 355 RMDLNMEALLSKDL 368
++ +EA KD
Sbjct: 207 HVNNGIEAFPPKDF 220
>gi|323388909|gb|ADX60259.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 265
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/123 (64%), Positives = 96/123 (78%), Gaps = 2/123 (1%)
Query: 248 DSNSMRSKQDENKSDSSKTKDN--SKPVEPPKDYIHVRARRGQATDSHSLAERVRREKIS 305
D++S+R++ + + ++SK+ D P P +DYIHVRARRGQATDSHSLAER RREKIS
Sbjct: 100 DNSSLRTEAETDSRNASKSGDQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKIS 159
Query: 306 ERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLS 365
ERMK LQDLVPGCNKV GKA +LDEIINY+Q+LQRQVEFLSMKL VN ++ +EA
Sbjct: 160 ERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLEAVNAHVNNGIEAFPP 219
Query: 366 KDL 368
KD
Sbjct: 220 KDF 222
>gi|356516503|ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 320
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/98 (79%), Positives = 85/98 (86%), Gaps = 3/98 (3%)
Query: 272 PVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEI 331
P EPP YIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC+KVTGKA+MLDEI
Sbjct: 154 PEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEI 213
Query: 332 INYVQSLQRQVEFLSMKLATVNPRM-DL--NMEALLSK 366
INYVQSLQ QVEFLSMKLA+VNP DL +++ LL +
Sbjct: 214 INYVQSLQNQVEFLSMKLASVNPMFYDLATDLDTLLVR 251
>gi|115456009|ref|NP_001051605.1| Os03g0802900 [Oryza sativa Japonica Group]
gi|29150361|gb|AAO72370.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711612|gb|ABF99407.1| bHLH transcription factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113550076|dbj|BAF13519.1| Os03g0802900 [Oryza sativa Japonica Group]
Length = 265
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/123 (64%), Positives = 96/123 (78%), Gaps = 2/123 (1%)
Query: 248 DSNSMRSKQDENKSDSSKTKDN--SKPVEPPKDYIHVRARRGQATDSHSLAERVRREKIS 305
D++S+R++ + + ++SK+ D P P +DYIHVRARRGQATDSHSLAER RREKIS
Sbjct: 100 DNSSLRTEAETDSRNASKSGDQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKIS 159
Query: 306 ERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLS 365
ERMK LQDLVPGCNKV GKA +LDEIINY+Q+LQRQVEFLSMKL VN ++ +EA
Sbjct: 160 ERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLEAVNAHVNNGIEAFPP 219
Query: 366 KDL 368
KD
Sbjct: 220 KDF 222
>gi|357516593|ref|XP_003628585.1| Transcription factor bHLH79 [Medicago truncatula]
gi|355522607|gb|AET03061.1| Transcription factor bHLH79 [Medicago truncatula]
Length = 278
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/92 (79%), Positives = 79/92 (85%)
Query: 279 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 338
YIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNKV GKA++LDEIINY+QSL
Sbjct: 148 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 207
Query: 339 QRQVEFLSMKLATVNPRMDLNMEALLSKDLFQ 370
QRQVEFLSMKL VN R++ +EA KD Q
Sbjct: 208 QRQVEFLSMKLEAVNSRLNTGIEAFPPKDYGQ 239
>gi|18423212|ref|NP_568745.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|30695963|ref|NP_851163.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|75305763|sp|Q93W88.1|BH137_ARATH RecName: Full=Transcription factor bHLH137; AltName: Full=Basic
helix-loop-helix protein 137; Short=AtbHLH137;
Short=bHLH 137; AltName: Full=Transcription factor EN
89; AltName: Full=bHLH transcription factor bHLH137
gi|16226850|gb|AAL16280.1|AF428350_1 unknown protein [Arabidopsis thaliana]
gi|15982883|gb|AAL09788.1| probable DNA-binding protein [Arabidopsis thaliana]
gi|21360503|gb|AAM47367.1| At5g50917/At5g50917 [Arabidopsis thaliana]
gi|21593195|gb|AAM65144.1| unknown [Arabidopsis thaliana]
gi|332008626|gb|AED96009.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|332008627|gb|AED96010.1| transcription factor bHLH137 [Arabidopsis thaliana]
Length = 286
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/105 (74%), Positives = 87/105 (82%), Gaps = 1/105 (0%)
Query: 250 NSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMK 309
NS SK+ S K K SK EPP DYIHVRARRGQATDSHSLAERVRREKISERM+
Sbjct: 105 NSNNSKEGVEGRKSKKQKRGSKE-EPPTDYIHVRARRGQATDSHSLAERVRREKISERMR 163
Query: 310 FLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 354
LQ+LVPGC+KVTGKA+MLDEIINYVQ+LQ QVEFLSMKL +++P
Sbjct: 164 TLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSISP 208
>gi|388503848|gb|AFK39990.1| unknown [Lotus japonicus]
Length = 248
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/127 (65%), Positives = 93/127 (73%), Gaps = 9/127 (7%)
Query: 259 NKSDSSKTKDNSKPVEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPG 317
N SD TK + EPPK DYIHVRARRGQATDSHS+AER RREKISERMK LQDLVPG
Sbjct: 97 NNSDEQSTKPSES--EPPKQDYIHVRARRGQATDSHSIAERARREKISERMKILQDLVPG 154
Query: 318 CNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLN--MEALLSKDL----FQS 371
CNK+ GKA++LDEIINY+QSLQ QVEFLSMKL VN R ++N E SKD+ F
Sbjct: 155 CNKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANMNPTNEGFPSKDVVTQPFDI 214
Query: 372 CGYVQHS 378
G + S
Sbjct: 215 AGVIYES 221
>gi|125588289|gb|EAZ28953.1| hypothetical protein OsJ_12999 [Oryza sativa Japonica Group]
Length = 224
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/123 (64%), Positives = 96/123 (78%), Gaps = 2/123 (1%)
Query: 248 DSNSMRSKQDENKSDSSKTKDN--SKPVEPPKDYIHVRARRGQATDSHSLAERVRREKIS 305
D++S+R++ + + ++SK+ D P P +DYIHVRARRGQATDSHSLAER RREKIS
Sbjct: 59 DNSSLRTEAETDSRNASKSGDQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKIS 118
Query: 306 ERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLS 365
ERMK LQDLVPGCNKV GKA +LDEIINY+Q+LQRQVEFLSMKL VN ++ +EA
Sbjct: 119 ERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLEAVNAHVNNGIEAFPP 178
Query: 366 KDL 368
KD
Sbjct: 179 KDF 181
>gi|242032639|ref|XP_002463714.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
gi|241917568|gb|EER90712.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
Length = 253
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/120 (66%), Positives = 90/120 (75%), Gaps = 2/120 (1%)
Query: 250 NSMRSKQDENKSDSSKTKDNSKPV-EPPK-DYIHVRARRGQATDSHSLAERVRREKISER 307
S+R++ + + + K S P EPPK DYIHVRARRGQATDSHSLAER RREKISER
Sbjct: 90 GSLRTEAETDPRSAGKAVSKSLPAAEPPKQDYIHVRARRGQATDSHSLAERARREKISER 149
Query: 308 MKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKD 367
MK LQDLVPGCNKV GKA +LDEIINY+QSLQ QVEFLSMKL VN + +EA KD
Sbjct: 150 MKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQVEFLSMKLEAVNAHANQGVEAFPVKD 209
>gi|356507384|ref|XP_003522447.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 334
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/98 (79%), Positives = 85/98 (86%), Gaps = 3/98 (3%)
Query: 272 PVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEI 331
P EPP YIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC+KVTGKA+MLDEI
Sbjct: 137 PEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEI 196
Query: 332 INYVQSLQRQVEFLSMKLATVNPRM-DL--NMEALLSK 366
INYVQSLQ QVEFLSMKLA+VNP DL +++ LL +
Sbjct: 197 INYVQSLQNQVEFLSMKLASVNPMFYDLATDLDTLLVR 234
>gi|363808192|ref|NP_001242485.1| uncharacterized protein LOC100809878 [Glycine max]
gi|255644791|gb|ACU22897.1| unknown [Glycine max]
Length = 224
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 116/200 (58%), Gaps = 30/200 (15%)
Query: 194 NNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMR 253
N++ S SLSE S +D PRKR+ P+SD A N S
Sbjct: 7 NDSTFSSANPSLSEIWPSHFPSDHTPRKRR---------LSPSSDS---ASNKHIKLSAP 54
Query: 254 SKQDENKS------DSSKTKDNSKPVEPPK----------DYIHVRARRGQATDSHSLAE 297
QD+N + D++ N P + PK DYIHVRARRGQATD+HSLAE
Sbjct: 55 ESQDQNGALKVGEVDATSVAGNKLPQQTPKPSSSEQAPKQDYIHVRARRGQATDNHSLAE 114
Query: 298 RVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMD 357
R RREKISERMK LQDLVPGCNKV GKA +LD IINYVQSLQRQVEFLSMKL V+ R+
Sbjct: 115 RARREKISERMKILQDLVPGCNKVIGKAFVLDGIINYVQSLQRQVEFLSMKLEAVSSRLS 174
Query: 358 L--NMEALLSKDLFQSCGYV 375
+ +E SK++ G +
Sbjct: 175 MKPTLECFPSKEVCTQAGII 194
>gi|218195917|gb|EEC78344.1| hypothetical protein OsI_18091 [Oryza sativa Indica Group]
Length = 339
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 86/110 (78%)
Query: 247 EDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISE 306
E+ + R ++ D K + EPP YIHVRARRGQATDSHSLAERVRREKISE
Sbjct: 145 EEKKARRVVLHQHDDDVKKKAKEAAGGEPPAGYIHVRARRGQATDSHSLAERVRREKISE 204
Query: 307 RMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM 356
RMK LQ LVPGC+KVTGKA+MLDEII+YVQSLQ QVEFLSMKLA++NP M
Sbjct: 205 RMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQVEFLSMKLASLNPLM 254
>gi|5923912|gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
Length = 321
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/183 (51%), Positives = 114/183 (62%), Gaps = 31/183 (16%)
Query: 176 SASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITS--QTVTDSNPRKRKSIQRPKAKET 233
SASD++K S + P+S+ ++ S +TS T + RKS ++PKA E+
Sbjct: 56 SASDNQKDCSSSVAEPQSSTEIRKRKDKSDGSCMTSVQSKGTKRETKSRKSQKKPKANES 115
Query: 234 PPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSH 293
D R++++E E P YIHVRARRGQATDSH
Sbjct: 116 --------------DEMKERTQEEE---------------EAPVGYIHVRARRGQATDSH 146
Query: 294 SLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 353
SLAERVRREKISERMK LQ LVPGC+KVTGKAVMLDEIINYVQSLQ QVEFLSMKLATV+
Sbjct: 147 SLAERVRREKISERMKLLQALVPGCDKVTGKAVMLDEIINYVQSLQNQVEFLSMKLATVS 206
Query: 354 PRM 356
P +
Sbjct: 207 PML 209
>gi|224119176|ref|XP_002318005.1| predicted protein [Populus trichocarpa]
gi|222858678|gb|EEE96225.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/113 (69%), Positives = 88/113 (77%), Gaps = 7/113 (6%)
Query: 270 SKPVEPP-KDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVML 328
SKP EPP +DYIHVR+RRGQATDSHSLAER RRE+I ERMK LQDLVPGCNKV GKA+ L
Sbjct: 130 SKPSEPPMQDYIHVRSRRGQATDSHSLAERARRERIGERMKILQDLVPGCNKVIGKALAL 189
Query: 329 DEIINYVQSLQRQVEFLSMKLATVNPRMDLN--MEALLSKDL----FQSCGYV 375
DEIINY+QSLQ QVEFLSMKL VN RM + +E L KDL F + G +
Sbjct: 190 DEIINYIQSLQCQVEFLSMKLEAVNSRMSTSPAIEGLHPKDLGAQPFDATGMI 242
>gi|226500746|ref|NP_001149110.1| LOC100282732 [Zea mays]
gi|195624818|gb|ACG34239.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 287
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/146 (56%), Positives = 102/146 (69%), Gaps = 4/146 (2%)
Query: 210 TSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRS-KQDENKSDSSKTKD 268
TS V D++PR S ++ S + +DSNS S K+ K D S K
Sbjct: 41 TSSGVLDTSPRGTSSGDNKACRKHKEDSGASFSSARSKDSNSKESSKRSGGKRDRSSKKV 100
Query: 269 NSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVML 328
+ E PK YIHVRARRGQATD+HSLAERVRRE+ISERM+ LQ LVPGC+KVTGKA++L
Sbjct: 101 DE---EEPKGYIHVRARRGQATDNHSLAERVRRERISERMRVLQALVPGCDKVTGKALIL 157
Query: 329 DEIINYVQSLQRQVEFLSMKLATVNP 354
DEIINYVQSLQ QVEFLSM++A+++P
Sbjct: 158 DEIINYVQSLQNQVEFLSMRIASLSP 183
>gi|358347900|ref|XP_003637988.1| Transcription factor BPE [Medicago truncatula]
gi|355503923|gb|AES85126.1| Transcription factor BPE [Medicago truncatula]
Length = 249
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/90 (80%), Positives = 79/90 (87%)
Query: 279 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 338
YIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNKV GKA++LDEIINY+QSL
Sbjct: 148 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 207
Query: 339 QRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
QRQVEFLSMKL VN R++ +EA KD+
Sbjct: 208 QRQVEFLSMKLEAVNSRLNTGIEAFPPKDV 237
>gi|224134264|ref|XP_002327796.1| predicted protein [Populus trichocarpa]
gi|222836881|gb|EEE75274.1| predicted protein [Populus trichocarpa]
Length = 290
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/104 (72%), Positives = 88/104 (84%), Gaps = 1/104 (0%)
Query: 266 TKDNSKPVEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGK 324
+K+N + PK DYIHVRARRGQATDSHSLAER RREKIS++MK LQDLVPGCNK+TG+
Sbjct: 185 SKENQQTSALPKTDYIHVRARRGQATDSHSLAERARREKISKKMKSLQDLVPGCNKITGR 244
Query: 325 AVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
A MLDEIINYVQSLQRQVEFLSMKLA +NPR + N++ K++
Sbjct: 245 AGMLDEIINYVQSLQRQVEFLSMKLAALNPRPEFNIDNFSGKEV 288
>gi|388504966|gb|AFK40549.1| unknown [Medicago truncatula]
Length = 278
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/92 (78%), Positives = 78/92 (84%)
Query: 279 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 338
YIHVRARRGQATDSH LAER RREKISERMK LQDLVPGCNKV GKA++LDEIINY+QSL
Sbjct: 148 YIHVRARRGQATDSHGLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 207
Query: 339 QRQVEFLSMKLATVNPRMDLNMEALLSKDLFQ 370
QRQVEFLSMKL VN R++ +EA KD Q
Sbjct: 208 QRQVEFLSMKLEAVNSRLNTGIEAFPPKDYGQ 239
>gi|242047764|ref|XP_002461628.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
gi|241925005|gb|EER98149.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
Length = 178
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/124 (63%), Positives = 93/124 (75%), Gaps = 1/124 (0%)
Query: 246 PEDSNSMRSKQDENKSDSSKTKDNSKPVEPPK-DYIHVRARRGQATDSHSLAERVRREKI 304
P ++N R++ N ++SK+ D + P DYIHVRARRGQATDSHSLAER RREKI
Sbjct: 13 PSENNDRRTEAGSNSGNASKSADKKPAPKEPPKDYIHVRARRGQATDSHSLAERARREKI 72
Query: 305 SERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALL 364
SERMK LQD+VPGCNKV GKA +LDEIINY+QSLQRQVEFLSMKL T+N M+ A
Sbjct: 73 SERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQVEFLSMKLETINAHMNNATVAFP 132
Query: 365 SKDL 368
+KD
Sbjct: 133 TKDF 136
>gi|238009798|gb|ACR35934.1| unknown [Zea mays]
Length = 287
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/146 (56%), Positives = 102/146 (69%), Gaps = 4/146 (2%)
Query: 210 TSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRS-KQDENKSDSSKTKD 268
TS V D++PR S ++ S + +DSNS S K+ K D S K
Sbjct: 41 TSSGVLDTSPRGTSSDDNKACRKHKEDSGASFSSARSKDSNSKESSKRSGGKRDRSSKKV 100
Query: 269 NSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVML 328
+ E PK YIHVRARRGQATD+HSLAERVRRE+ISERM+ LQ LVPGC+KVTGKA++L
Sbjct: 101 DE---EEPKGYIHVRARRGQATDNHSLAERVRRERISERMRVLQALVPGCDKVTGKALIL 157
Query: 329 DEIINYVQSLQRQVEFLSMKLATVNP 354
DEIINYVQSLQ QVEFLSM++A+++P
Sbjct: 158 DEIINYVQSLQNQVEFLSMRIASLSP 183
>gi|226504718|ref|NP_001150409.1| LOC100284039 [Zea mays]
gi|195639036|gb|ACG38986.1| protein SPATULA [Zea mays]
gi|414873439|tpg|DAA51996.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 255
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/120 (65%), Positives = 91/120 (75%), Gaps = 2/120 (1%)
Query: 250 NSMRSKQDENKSDSSKTKDNSKPV-EPPK-DYIHVRARRGQATDSHSLAERVRREKISER 307
S+R++ + + + K + P EPPK DYIHVRARRGQATDSHSLAER RREKISER
Sbjct: 92 GSLRTEVETDSRSAGKAVSKNIPAAEPPKQDYIHVRARRGQATDSHSLAERARREKISER 151
Query: 308 MKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKD 367
MK LQDLVPGCNKV GKA +LDEIINY+QSLQ QVEFLSMKL VN + + +E +KD
Sbjct: 152 MKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQVEFLSMKLEAVNAQANQGVEVFPAKD 211
>gi|218191430|gb|EEC73857.1| hypothetical protein OsI_08622 [Oryza sativa Indica Group]
Length = 361
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/129 (62%), Positives = 96/129 (74%), Gaps = 3/129 (2%)
Query: 246 PEDSNSMRSKQDENKS--DSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREK 303
PE + K+ E S DS T ++ DYIHVRARRGQATDSHSLAERVRRE+
Sbjct: 126 PERARPGAKKKAEVASPKDSPATSASTVTAGQKTDYIHVRARRGQATDSHSLAERVRRER 185
Query: 304 ISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNM-EA 362
ISERM++LQ+LVPGCNKVTGKA MLDEIINYVQSLQ+QVEFLSMK+A NP ++ N+ E
Sbjct: 186 ISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFLSMKIAASNPVVNFNIVED 245
Query: 363 LLSKDLFQS 371
L + L Q+
Sbjct: 246 LFGRQLSQA 254
>gi|115448177|ref|NP_001047868.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|41053096|dbj|BAD08039.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113537399|dbj|BAF09782.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|215767339|dbj|BAG99567.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/129 (62%), Positives = 96/129 (74%), Gaps = 3/129 (2%)
Query: 246 PEDSNSMRSKQDENKS--DSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREK 303
PE + K+ E S DS T ++ DYIHVRARRGQATDSHSLAERVRRE+
Sbjct: 126 PERARPGAKKKAEVASPKDSPATSASTVTAGQKTDYIHVRARRGQATDSHSLAERVRRER 185
Query: 304 ISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNM-EA 362
ISERM++LQ+LVPGCNKVTGKA MLDEIINYVQSLQ+QVEFLSMK+A NP ++ N+ E
Sbjct: 186 ISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFLSMKIAASNPVVNFNIVED 245
Query: 363 LLSKDLFQS 371
L + L Q+
Sbjct: 246 LFGRQLSQA 254
>gi|295913657|gb|ADG58071.1| transcription factor [Lycoris longituba]
Length = 258
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/135 (62%), Positives = 100/135 (74%), Gaps = 4/135 (2%)
Query: 247 EDSNSMRSKQDENKSDSSKTKDNS-KPVEPPK-DYIHVRARRGQATDSHSLAERVRREKI 304
E+SNS +++ + + +K D S +P E PK DYIHVRARRGQATDSHSLAER RREKI
Sbjct: 95 ENSNS-KTEAEASSGLCNKLADQSNQPSEAPKQDYIHVRARRGQATDSHSLAERARREKI 153
Query: 305 SERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALL 364
SERM LQDLVPGCNKV GKA +LDEIINY+Q+LQRQVEFLSMKL VN +M+ +E
Sbjct: 154 SERMNILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLEAVNSQMNPGIEGFP 213
Query: 365 SKDLFQSCGYVQHSL 379
KD F + Y SL
Sbjct: 214 PKD-FGAQAYETPSL 227
>gi|50509096|dbj|BAD30156.1| putative bHLH protein [Oryza sativa Japonica Group]
Length = 268
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 112/182 (61%), Gaps = 21/182 (11%)
Query: 201 EGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENK 260
E LS+ +++ + + P+AK P ++ + ++S+R++ +
Sbjct: 52 EDDDLSKVVSTSAASGGGGGGGQDSDAPEAKRLKPM-------KSSDKNDSLRTEAGTDS 104
Query: 261 SDSSKTKD-NSKPVEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC 318
+SSK D N+ P EPPK DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGC
Sbjct: 105 GNSSKAADKNATPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 164
Query: 319 NKVTGKAVMLDEIINYVQSLQRQVE------------FLSMKLATVNPRMDLNMEALLSK 366
NKV GKA +LDEIINY+QSLQ QVE FLSMKL VN M + A SK
Sbjct: 165 NKVIGKASVLDEIINYIQSLQHQVEFMFKYLIELFLQFLSMKLEAVNSHMINGIVAFPSK 224
Query: 367 DL 368
D
Sbjct: 225 DF 226
>gi|224136304|ref|XP_002322296.1| predicted protein [Populus trichocarpa]
gi|222869292|gb|EEF06423.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/89 (82%), Positives = 80/89 (89%), Gaps = 1/89 (1%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
EPP YIHVRARRGQATDSHSLAERVRRE+ISERMK LQ LVPGC+K+TGKA+MLDEIIN
Sbjct: 166 EPPAGYIHVRARRGQATDSHSLAERVRRERISERMKILQLLVPGCDKITGKALMLDEIIN 225
Query: 334 YVQSLQRQVEFLSMKLATVNPRM-DLNME 361
YVQSLQ QVEFLSMKLA+VNP + D M+
Sbjct: 226 YVQSLQNQVEFLSMKLASVNPLLYDFGMD 254
>gi|224100187|ref|XP_002311780.1| predicted protein [Populus trichocarpa]
gi|222851600|gb|EEE89147.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 74/93 (79%), Positives = 79/93 (84%)
Query: 278 DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQS 337
DYIHVRARRGQATDSHSLAER RREKISERMK LQD+VPGCNKVTGKA++LDEIINY+QS
Sbjct: 137 DYIHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVTGKALVLDEIINYIQS 196
Query: 338 LQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQ 370
LQRQVEFLSMKL VN M+ E SKD Q
Sbjct: 197 LQRQVEFLSMKLEAVNLNMNPETEVFPSKDFGQ 229
>gi|115461581|ref|NP_001054390.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|57863903|gb|AAW56931.1| unknown protein [Oryza sativa Japonica Group]
gi|57863910|gb|AAS88824.2| unknown protein [Oryza sativa Japonica Group]
gi|113577941|dbj|BAF16304.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|215686863|dbj|BAG89713.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629873|gb|EEE62005.1| hypothetical protein OsJ_16787 [Oryza sativa Japonica Group]
gi|323388921|gb|ADX60265.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 339
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/110 (68%), Positives = 86/110 (78%)
Query: 247 EDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISE 306
E+ + R ++ D K + EPP YIHVRARRGQATDSHSLAERVRREKISE
Sbjct: 145 EEKKARRVVLHQHDDDVKKKAKEAAGGEPPAGYIHVRARRGQATDSHSLAERVRREKISE 204
Query: 307 RMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM 356
RMK LQ LVPGC+KVTGKA+MLDEII+YVQSLQ QVEFLSMKLA+++P M
Sbjct: 205 RMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQVEFLSMKLASLSPLM 254
>gi|357486401|ref|XP_003613488.1| BHLH transcription factor [Medicago truncatula]
gi|355514823|gb|AES96446.1| BHLH transcription factor [Medicago truncatula]
Length = 239
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/117 (67%), Positives = 86/117 (73%), Gaps = 1/117 (0%)
Query: 254 SKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQD 313
SK +EN S + + +P P KDYIHVRARRGQATDSHSLAER RREKISERMK LQD
Sbjct: 85 SKGEENSSGKHAEETSDEP-HPKKDYIHVRARRGQATDSHSLAERARREKISERMKTLQD 143
Query: 314 LVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQ 370
LVPGCNKV GKA++LDEIINY+QSL QVEFLSMKL VN R ME K Q
Sbjct: 144 LVPGCNKVIGKALVLDEIINYIQSLHHQVEFLSMKLEAVNSRPTPGMEVFPPKTFDQ 200
>gi|357137204|ref|XP_003570191.1| PREDICTED: uncharacterized protein LOC100822236 [Brachypodium
distachyon]
Length = 361
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/156 (51%), Positives = 106/156 (67%), Gaps = 8/156 (5%)
Query: 215 TDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVE 274
+D+ + +RP+ K+ D PE + +++ K D + K + +
Sbjct: 96 SDAYLDAKGECKRPRGKQQVCELDQSSGRGKPEKAKPAGTRK---KGDVAAQKQDPRAAG 152
Query: 275 PPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
K DYIHVRARRGQATDSHSLAERVRRE+ISERM++LQ+LVPGC+KVTGKA MLDEIIN
Sbjct: 153 GQKTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIIN 212
Query: 334 YVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLF 369
YVQSLQ+QVEFLSMK+A NP ++ + + +DLF
Sbjct: 213 YVQSLQKQVEFLSMKIAASNPVVNFD----IVEDLF 244
>gi|224137946|ref|XP_002322691.1| predicted protein [Populus trichocarpa]
gi|222867321|gb|EEF04452.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 137/234 (58%), Gaps = 31/234 (13%)
Query: 138 GSKSSNNLPIPAADPGFAERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNA 197
G K NL P+ + ERAAR S F G S S + + S+ N
Sbjct: 63 GQKQCPNLTFPS-NTSLLERAARFSVFNGG------------SNSTDSSSAPSDSSSKNL 109
Query: 198 DSKEGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKV--VAENPEDSNSMRSK 255
+ KE + E + +++ DS+ P SDPKV A N + + +
Sbjct: 110 E-KEAAVKREPLETESYLDSS--------------QPLVSDPKVDNPAPNARACSKRKER 154
Query: 256 QDENKSDSSKTK-DNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDL 314
+ + K S K+K + S+ E Y+HVRARRGQATDSHSLAER RREKI++RMK LQ+L
Sbjct: 155 EKKVKGASKKSKNEGSQQEEEKLPYVHVRARRGQATDSHSLAERARREKINQRMKLLQEL 214
Query: 315 VPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
VPGCNK++G A++LDEIIN+VQ LQRQVE LSM+LA VNPR+D N++++LS +
Sbjct: 215 VPGCNKISGTALVLDEIINHVQFLQRQVEILSMRLAAVNPRIDFNLDSMLSAEF 268
>gi|297819388|ref|XP_002877577.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
gi|297323415|gb|EFH53836.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
Length = 260
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 86/114 (75%), Gaps = 3/114 (2%)
Query: 240 KVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERV 299
KV E + +R + + + SK + P+ KDYIHVRARRGQATD HSLAER
Sbjct: 101 KVCLSEGETEDGLRREGETSSGGGSKETEEKSPL---KDYIHVRARRGQATDRHSLAERA 157
Query: 300 RREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 353
RREKISERMKFLQDL+PGCNK+ GKA++LDEIINY+QSLQRQVEFLSMKL VN
Sbjct: 158 RREKISERMKFLQDLIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSMKLEIVN 211
>gi|356562791|ref|XP_003549652.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 229
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/196 (47%), Positives = 117/196 (59%), Gaps = 29/196 (14%)
Query: 191 PESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSN 250
P N++ S SLSE S TD P ++ + P++D N +
Sbjct: 4 PLINDSTFSSANPSLSEIWPSHFPTDHTPSNKRHLS--------PSTD---CGSNKHIKS 52
Query: 251 SMRSKQDENKS------DSSKTKDNSKPVE---------PPK-DYIHVRARRGQATDSHS 294
S QD+N + D++ N P + PPK DYIHVRARRGQATDSHS
Sbjct: 53 SGSGSQDQNGALKAGEVDATSVAGNKLPEQTAKPSSSEQPPKQDYIHVRARRGQATDSHS 112
Query: 295 LAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 354
LAER RREKISERMK LQD+VPGCNKV GKA++LDEIINY+QSLQ QVEFLSMKL VN
Sbjct: 113 LAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNS 172
Query: 355 RMDLN--MEALLSKDL 368
R+ ++ +E SK++
Sbjct: 173 RLSMSPTIECFPSKEV 188
>gi|326506812|dbj|BAJ91447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510963|dbj|BAJ91829.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/160 (48%), Positives = 104/160 (65%), Gaps = 11/160 (6%)
Query: 216 DSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEP 275
D+ + +RP+ K+ +P+++ + E ++ K +
Sbjct: 93 DAYLDAKDGCKRPRGKQQ---------LRDPDEAGGAAKGRPEKPKACARKKPEAAAAGQ 143
Query: 276 PKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYV 335
DYIHVRARRGQATDSHSLAERVRRE+ISERM++LQ+LVPGC+KVTGKA MLDEIINYV
Sbjct: 144 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYV 203
Query: 336 QSLQRQVEFLSMKLATVNPRMDLNM--EALLSKDLFQSCG 373
QSLQ+QVEFLSMK+A NP ++ N+ + + + Q CG
Sbjct: 204 QSLQKQVEFLSMKIAAANPVVNFNIVDDLFGGRRMSQPCG 243
>gi|449462268|ref|XP_004148863.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 187
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/93 (76%), Positives = 85/93 (91%), Gaps = 1/93 (1%)
Query: 278 DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQS 337
DY+HVRARRG+ATDSHSLAER RREKISERMK+LQ+LVPGCNK+ GKA MLDEIINYVQS
Sbjct: 2 DYVHVRARRGKATDSHSLAERARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQS 61
Query: 338 LQRQVEFLSMKLATVNPRMD-LNMEALLSKDLF 369
LQ+QVEFLSMK+A +N R+D +N++ LL+K +F
Sbjct: 62 LQQQVEFLSMKVAALNHRVDFINVDDLLAKQMF 94
>gi|125562347|gb|EAZ07795.1| hypothetical protein OsI_30053 [Oryza sativa Indica Group]
gi|125604159|gb|EAZ43484.1| hypothetical protein OsJ_28098 [Oryza sativa Japonica Group]
Length = 291
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 112/157 (71%), Gaps = 20/157 (12%)
Query: 201 EGSSLSEQITSQTVTDSNP---RKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQD 257
E +SL +++ V D++P RKRK+ A+++ + D + +D S R K+
Sbjct: 56 EDASLESSVSA--VLDTSPSVDRKRKA-----AEDSAHSKD------SCKDGKSRRGKKA 102
Query: 258 ENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPG 317
+ + T ++ EPPK YIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ LVPG
Sbjct: 103 SKEVEEKSTTED----EPPKGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPG 158
Query: 318 CNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 354
C+KVTGKA++LDEIINYVQSLQ QVEFLSM++A+++P
Sbjct: 159 CDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSP 195
>gi|222623520|gb|EEE57652.1| hypothetical protein OsJ_08085 [Oryza sativa Japonica Group]
Length = 300
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/126 (63%), Positives = 94/126 (74%), Gaps = 6/126 (4%)
Query: 246 PEDSNSMRSKQDENKS--DSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREK 303
PE + K+ E S DS T ++ DYIHVRARRGQATDSHSLAERVRRE+
Sbjct: 126 PERARPGAKKKAEVASPKDSPATSASTVTAGQKTDYIHVRARRGQATDSHSLAERVRRER 185
Query: 304 ISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEAL 363
ISERM++LQ+LVPGCNKVTGKA MLDEIINYVQSLQ+QVEFLSMK+A NP ++ N
Sbjct: 186 ISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFLSMKIAASNPVVNFN---- 241
Query: 364 LSKDLF 369
+ +DLF
Sbjct: 242 IVEDLF 247
>gi|255645941|gb|ACU23459.1| unknown [Glycine max]
Length = 193
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/124 (66%), Positives = 89/124 (71%), Gaps = 17/124 (13%)
Query: 239 PKVVAENPEDSNSMRSKQDENKSDSSKTK----------------DNSKPVEPPKDYIHV 282
PKVVAEN ++ D+ +S +K+ NSK E P DYIHV
Sbjct: 71 PKVVAENDNKDKRIKFGSDDGESKITKSNTTNTNTNNNKETCAETSNSKASEKP-DYIHV 129
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RARRGQATDSHSLAERVRREKISERMK+LQDLVPGCNKVTGKA MLDEIINYVQSLQRQV
Sbjct: 130 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQV 189
Query: 343 EFLS 346
EFLS
Sbjct: 190 EFLS 193
>gi|414591902|tpg|DAA42473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/124 (62%), Positives = 91/124 (73%), Gaps = 1/124 (0%)
Query: 246 PEDSNSMRSKQDENKSDSSKTKDNSKPVEPPK-DYIHVRARRGQATDSHSLAERVRREKI 304
P + N R++ + N ++SK+ D + P DYIHVRARRGQATDSHSLAER RREKI
Sbjct: 86 PSEKNDRRTEAETNSGNASKSADKKPAPKEPPKDYIHVRARRGQATDSHSLAERARREKI 145
Query: 305 SERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALL 364
SERMK LQD+VPGCNKV GKA +LDEIINY+QSLQRQVEFLSMKL +N + A
Sbjct: 146 SERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQVEFLSMKLEAINAHVSNATVAFP 205
Query: 365 SKDL 368
+KD
Sbjct: 206 TKDF 209
>gi|297802298|ref|XP_002869033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314869|gb|EFH45292.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 304
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/143 (56%), Positives = 105/143 (73%), Gaps = 9/143 (6%)
Query: 226 QRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRAR 285
++P+ K T K+ AE+ E +SM+ K N S++ + + KP DYIHVRAR
Sbjct: 94 RKPEGK-TEKREKKKIKAED-ETESSMKGKT--NMSNTETSSEIQKP-----DYIHVRAR 144
Query: 286 RGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 345
RG+ATD HSLAER RREKIS++MK LQD+VPGCNKVTGKA MLDEIINYVQSLQ+QVEFL
Sbjct: 145 RGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFL 204
Query: 346 SMKLATVNPRMDLNMEALLSKDL 368
SMKL+ +NP ++ +++ L +K
Sbjct: 205 SMKLSVINPELECHIDDLSAKQF 227
>gi|30690689|ref|NP_849508.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|332661270|gb|AEE86670.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 302
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/159 (54%), Positives = 112/159 (70%), Gaps = 15/159 (9%)
Query: 211 SQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNS 270
S+ +T N RK P+ K T K+ AE+ E SM+ KS+ S T+ +S
Sbjct: 85 SRAITLQNKRK------PEGK-TEKREKKKIKAED-ETEPSMK-----GKSNMSNTETSS 131
Query: 271 KPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDE 330
+ +P DYIHVRARRG+ATD HSLAER RREKIS++MK LQD+VPGCNKVTGKA MLDE
Sbjct: 132 EIQKP--DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDE 189
Query: 331 IINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLF 369
IINYVQSLQ+QVEFLSMKL+ +NP ++ +++ L +K +
Sbjct: 190 IINYVQSLQQQVEFLSMKLSVINPELECHIDDLSAKQAY 228
>gi|4006909|emb|CAB16839.1| putative protein [Arabidopsis thaliana]
gi|7270602|emb|CAB80320.1| putative protein [Arabidopsis thaliana]
Length = 300
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/158 (55%), Positives = 111/158 (70%), Gaps = 15/158 (9%)
Query: 211 SQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNS 270
S+ +T N RK P+ K T K+ AE+ E SM+ KS+ S T+ +S
Sbjct: 81 SRAITLQNKRK------PEGK-TEKREKKKIKAED-ETEPSMK-----GKSNMSNTETSS 127
Query: 271 KPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDE 330
+ +P DYIHVRARRG+ATD HSLAER RREKIS++MK LQD+VPGCNKVTGKA MLDE
Sbjct: 128 EIQKP--DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDE 185
Query: 331 IINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
IINYVQSLQ+QVEFLSMKL+ +NP ++ +++ L +K
Sbjct: 186 IINYVQSLQQQVEFLSMKLSVINPELECHIDDLSAKQF 223
>gi|242041659|ref|XP_002468224.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
gi|241922078|gb|EER95222.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
Length = 291
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 123/209 (58%), Gaps = 40/209 (19%)
Query: 277 KDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQ 336
+DY+HVRA+RGQAT+SHSLAER RREKI+ERMK LQDLVPGCNK+TGKA+MLDEIINYVQ
Sbjct: 118 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 177
Query: 337 SLQRQVEFLSMKLATVNPRM--DLNMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQ 394
SLQRQVEFLSMKL+ ++P + DL+++ +L C S +PG Y
Sbjct: 178 SLQRQVEFLSMKLSAISPELNCDLDLQDIL-------CTQDASSAFPG----------YN 220
Query: 395 PQQGS-HLTSSGINNNAENQFSINAL--NSSLHRNHNIQLPPINGHGEVGPRVPSLWDDD 451
Q + HL + +E FS + +++H N QL P+ +W+++
Sbjct: 221 VQANNVHLN---LYRASEEDFSHRIIPNPANVHVTRNAQLSAF-------PQRGVIWNEE 270
Query: 452 LQSLVQMGFNQNQPRSLNGSMATTQMKIE 480
L+S+ P S MK+E
Sbjct: 271 LRSIA--------PNSFASDTIADSMKVE 291
>gi|34391435|gb|AAN18284.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 288
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/158 (55%), Positives = 111/158 (70%), Gaps = 15/158 (9%)
Query: 211 SQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNS 270
S+ +T N RK P+ K T K+ AE+ E SM+ KS+ S T+ +S
Sbjct: 69 SRAITLQNKRK------PEGK-TEKREKKKIKAED-ETEPSMK-----GKSNMSNTETSS 115
Query: 271 KPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDE 330
+ +P DYIHVRARRG+ATD HSLAER RREKIS++MK LQD+VPGCNKVTGKA MLDE
Sbjct: 116 EIQKP--DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDE 173
Query: 331 IINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
IINYVQSLQ+QVEFLSMKL+ +NP ++ +++ L +K
Sbjct: 174 IINYVQSLQQQVEFLSMKLSVINPELECHIDDLSAKQF 211
>gi|224120394|ref|XP_002331037.1| predicted protein [Populus trichocarpa]
gi|222872967|gb|EEF10098.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 75/125 (60%), Positives = 96/125 (76%), Gaps = 10/125 (8%)
Query: 279 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 338
Y+HVRARRGQATDSHSLAER RREKI++RMK LQ+LVPGCNK++G A++LDEIIN+VQSL
Sbjct: 174 YVHVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEIINHVQSL 233
Query: 339 QRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQTFP------SR 392
Q QVEFLSM+LA VNPR+D N++++LS + G + S +PG +P +R
Sbjct: 234 QCQVEFLSMRLAAVNPRIDFNLDSMLSAE----SGSLIDSNFPGMVMPLMWPEAEVNGNR 289
Query: 393 YQPQQ 397
+Q QQ
Sbjct: 290 HQFQQ 294
>gi|15451016|gb|AAK96779.1| Unknown protein [Arabidopsis thaliana]
gi|23198360|gb|AAN15707.1| Unknown protein [Arabidopsis thaliana]
Length = 304
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/158 (55%), Positives = 111/158 (70%), Gaps = 15/158 (9%)
Query: 211 SQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNS 270
S+ +T N RK P+ K T K+ AE+ E SM+ KS+ S T+ +S
Sbjct: 85 SRAITLQNKRK------PEGK-TEKREKKKIKAED-ETEPSMK-----GKSNMSNTETSS 131
Query: 271 KPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDE 330
+ +P DYIHVRARRG+ATD HSLAER RREKIS++MK LQD+VPGCNKVTGKA MLDE
Sbjct: 132 EIQKP--DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDE 189
Query: 331 IINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
IINYVQSLQ+QVEFLSMKL+ +NP ++ +++ L +K
Sbjct: 190 IINYVQSLQQQVEFLSMKLSVINPELECHIDDLSAKQF 227
>gi|20127056|gb|AAM10947.1|AF488591_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 304
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/158 (55%), Positives = 111/158 (70%), Gaps = 15/158 (9%)
Query: 211 SQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNS 270
S+ +T N RK P+ K T K+ AE+ E SM+ KS+ S T+ +S
Sbjct: 85 SRAITLQNKRK------PEGK-TEKREKKKIKAED-ETEPSMK-----GKSNMSNTETSS 131
Query: 271 KPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDE 330
+ +P DYIHVRARRG+ATD HSLAER RREKIS++MK LQD+VPGCNKVTGKA MLDE
Sbjct: 132 EIQKP--DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDE 189
Query: 331 IINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
IINYVQSLQ+QVEFLSMKL+ +NP ++ +++ L +K
Sbjct: 190 IINYVQSLQQQVEFLSMKLSVINPELECHIDDLSAKQF 227
>gi|242049812|ref|XP_002462650.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
gi|241926027|gb|EER99171.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
Length = 281
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/147 (57%), Positives = 103/147 (70%), Gaps = 8/147 (5%)
Query: 210 TSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRS--KQDENKSDSSKTK 267
TS V D++P+ S + K P + + +DSNS S K+ + SSK
Sbjct: 41 TSSGVLDTSPQGTASDDKKPRK--PREDSASFSSAHSKDSNSKESTKKKGGKRDRSSKEV 98
Query: 268 DNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVM 327
D E PK YIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ LVPGC+KVTGKA++
Sbjct: 99 DE----EEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALI 154
Query: 328 LDEIINYVQSLQRQVEFLSMKLATVNP 354
LDEIINYVQSLQ QVEFLSM++A+++P
Sbjct: 155 LDEIINYVQSLQNQVEFLSMRIASLSP 181
>gi|357115005|ref|XP_003559284.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 243
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/124 (62%), Positives = 92/124 (74%), Gaps = 2/124 (1%)
Query: 247 EDSNSMRSKQDENKSDSSKTKDNSKPVEP--PKDYIHVRARRGQATDSHSLAERVRREKI 304
+D+ S R+ + + + SK D + P +DYIHVRARRGQATDSHSLAER RREKI
Sbjct: 77 DDNGSFRTDAEGDSRNGSKVVDQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKI 136
Query: 305 SERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALL 364
+ERMK LQDLVPGCNKV GKA +LDEIINYVQ+L+RQVEFLSMKL VN ++ +E
Sbjct: 137 TERMKILQDLVPGCNKVIGKASVLDEIINYVQALERQVEFLSMKLEAVNAHVNNGVETFP 196
Query: 365 SKDL 368
SKD
Sbjct: 197 SKDF 200
>gi|15234436|ref|NP_195372.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|75305715|sp|Q93VJ4.1|BEE2_ARATH RecName: Full=Transcription factor BEE 2; AltName: Full=Basic
helix-loop-helix protein 58; Short=AtbHLH58; Short=bHLH
58; AltName: Full=Protein Brassinosteroid enhanced
expression 2; AltName: Full=Transcription factor EN 80;
AltName: Full=bHLH transcription factor bHLH058
gi|13877937|gb|AAK44046.1|AF370231_1 unknown protein [Arabidopsis thaliana]
gi|16323468|gb|AAL15228.1| unknown protein [Arabidopsis thaliana]
gi|332661269|gb|AEE86669.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 304
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/158 (55%), Positives = 111/158 (70%), Gaps = 15/158 (9%)
Query: 211 SQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNS 270
S+ +T N RK P+ K T K+ AE+ E SM+ KS+ S T+ +S
Sbjct: 85 SRAITLQNKRK------PEGK-TEKREKKKIKAED-ETEPSMK-----GKSNMSNTETSS 131
Query: 271 KPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDE 330
+ +P DYIHVRARRG+ATD HSLAER RREKIS++MK LQD+VPGCNKVTGKA MLDE
Sbjct: 132 EIQKP--DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDE 189
Query: 331 IINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
IINYVQSLQ+QVEFLSMKL+ +NP ++ +++ L +K
Sbjct: 190 IINYVQSLQQQVEFLSMKLSVINPELECHIDDLSAKQF 227
>gi|89257428|gb|ABD64920.1| bHLH transcription factor, putative [Brassica oleracea]
Length = 155
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 78/126 (61%), Positives = 89/126 (70%), Gaps = 6/126 (4%)
Query: 268 DNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVM 327
D++KP EPPKDYIHVRARRGQ DSH AERVRREKISE + LQDLVP +++TGKA
Sbjct: 7 DDTKPPEPPKDYIHVRARRGQPADSHRFAERVRREKISEMLTLLQDLVPDSSRITGKADS 66
Query: 328 LDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQ 387
LDEIINYVQSL+RQVE L MKLAT+NPRM+ N A L S ++ LY CS Q
Sbjct: 67 LDEIINYVQSLKRQVELLYMKLATINPRMESNRNAAL------SIKVKENMLYAIACSEQ 120
Query: 388 TFPSRY 393
P Y
Sbjct: 121 RLPLGY 126
>gi|255648089|gb|ACU24499.1| unknown [Glycine max]
Length = 229
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 116/196 (59%), Gaps = 29/196 (14%)
Query: 191 PESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSN 250
P N++ S SLSE S TD P ++ + P++D N +
Sbjct: 4 PLINDSTFSSANPSLSEIWPSHFPTDHTPSNKRHLS--------PSTD---CGSNKHIKS 52
Query: 251 SMRSKQDENKS------DSSKTKDNSKPVE---------PPK-DYIHVRARRGQATDSHS 294
S QD+N + D++ N P + PPK DYIHVRARRGQATDSHS
Sbjct: 53 SGSGSQDQNGALKAGEVDATSVAGNKLPEQTAKPSSSEQPPKQDYIHVRARRGQATDSHS 112
Query: 295 LAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 354
LAER RREKISERMK LQD+VPGCNKV GKA++LDEIINY+QSLQ QVEFL MKL VN
Sbjct: 113 LAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEFLFMKLEAVNS 172
Query: 355 RMDLN--MEALLSKDL 368
R+ ++ +E SK++
Sbjct: 173 RLSMSPIIECFPSKEV 188
>gi|212721642|ref|NP_001131806.1| uncharacterized protein LOC100193179 [Zea mays]
gi|194692596|gb|ACF80382.1| unknown [Zea mays]
gi|414869722|tpg|DAA48279.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 315
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/155 (52%), Positives = 109/155 (70%), Gaps = 11/155 (7%)
Query: 210 TSQTVTDSNPRKRKSIQR--PKAKETPPTSDPKVV--AENPED------SNSMRSKQDEN 259
+S V D++P+ + S P ++ P D + A++ ED S S R K+ N
Sbjct: 58 SSSAVVDTSPQPQGSAAAASPMERKRKPAEDSATLSSAQSKEDCKQQQESKSRRGKRPHN 117
Query: 260 KSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCN 319
K +++ K ++ E + YIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ LVPGC+
Sbjct: 118 KEANTEEKSATED-EATRGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCD 176
Query: 320 KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 354
KVTGKA++LDEIINYVQSLQ QVEFLSM++A+++P
Sbjct: 177 KVTGKALILDEIINYVQSLQNQVEFLSMRIASMSP 211
>gi|414869721|tpg|DAA48278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 314
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/155 (52%), Positives = 109/155 (70%), Gaps = 11/155 (7%)
Query: 210 TSQTVTDSNPRKRKSIQR--PKAKETPPTSDPKVV--AENPED------SNSMRSKQDEN 259
+S V D++P+ + S P ++ P D + A++ ED S S R K+ N
Sbjct: 58 SSSAVVDTSPQPQGSAAAASPMERKRKPAEDSATLSSAQSKEDCKQQQESKSRRGKRPHN 117
Query: 260 KSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCN 319
K +++ K ++ E + YIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ LVPGC+
Sbjct: 118 KEANTEEKSATED-EATRGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCD 176
Query: 320 KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 354
KVTGKA++LDEIINYVQSLQ QVEFLSM++A+++P
Sbjct: 177 KVTGKALILDEIINYVQSLQNQVEFLSMRIASMSP 211
>gi|21537215|gb|AAM61556.1| unknown [Arabidopsis thaliana]
Length = 288
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 108/158 (68%), Gaps = 15/158 (9%)
Query: 211 SQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNS 270
S+ +T N RK P+ K T K+ AE+ E SM+ K N S+ + +
Sbjct: 69 SRAITLQNKRK------PEGK-TEKREKKKIKAED-ETEPSMKGKS--NMSNXETSSEIQ 118
Query: 271 KPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDE 330
KP DYIHVRARRG+ATD HSLAER RREKIS++MK LQD+VPGCNKVTGKA MLDE
Sbjct: 119 KP-----DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDE 173
Query: 331 IINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
IINYVQSLQ+QVEFLSMKL+ +NP ++ +++ L +K
Sbjct: 174 IINYVQSLQQQVEFLSMKLSVINPELECHIDDLSAKQF 211
>gi|225441702|ref|XP_002282897.1| PREDICTED: transcription factor bHLH60 [Vitis vinifera]
gi|297739713|emb|CBI29895.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 81/87 (93%)
Query: 279 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 338
Y+HVRARRGQATDSHSLAER RREKI+ RMK LQ+LVPGCNK++G A++LDEII++VQSL
Sbjct: 194 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIISHVQSL 253
Query: 339 QRQVEFLSMKLATVNPRMDLNMEALLS 365
QRQVEFLSM+LA VNPR+D N+++LL+
Sbjct: 254 QRQVEFLSMRLAAVNPRIDFNLDSLLA 280
>gi|226495537|ref|NP_001141393.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194704318|gb|ACF86243.1| unknown [Zea mays]
gi|413923610|gb|AFW63542.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 342
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 72/95 (75%), Positives = 83/95 (87%), Gaps = 1/95 (1%)
Query: 278 DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQS 337
DYIHVRARRGQATDSHSLAERVRRE+ISERM++LQ+LVPGC+KVTGKA MLDEIINYVQS
Sbjct: 139 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 198
Query: 338 LQRQVEFLSMKLATVNPRMDLNM-EALLSKDLFQS 371
LQ+QVEFLSMK+A NP + ++ E L + L QS
Sbjct: 199 LQKQVEFLSMKIAASNPVVSFDIVEDLFGRQLKQS 233
>gi|413923609|gb|AFW63541.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/95 (75%), Positives = 83/95 (87%), Gaps = 1/95 (1%)
Query: 278 DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQS 337
DYIHVRARRGQATDSHSLAERVRRE+ISERM++LQ+LVPGC+KVTGKA MLDEIINYVQS
Sbjct: 139 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 198
Query: 338 LQRQVEFLSMKLATVNPRMDLNM-EALLSKDLFQS 371
LQ+QVEFLSMK+A NP + ++ E L + L QS
Sbjct: 199 LQKQVEFLSMKIAASNPVVSFDIVEDLFGRQLKQS 233
>gi|218192387|gb|EEC74814.1| hypothetical protein OsI_10634 [Oryza sativa Indica Group]
gi|222624516|gb|EEE58648.1| hypothetical protein OsJ_10029 [Oryza sativa Japonica Group]
Length = 307
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/102 (68%), Positives = 88/102 (86%), Gaps = 6/102 (5%)
Query: 277 KDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQ 336
++Y+HVRA+RGQAT+SHSLAER RREKI+ERMK LQDLVPGCNK+TGKA+MLDEIINYVQ
Sbjct: 120 EEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 179
Query: 337 SLQRQVEFLSMKLATVNPRM--DLNMEALL----SKDLFQSC 372
SLQRQVEFLSMKL+T++P + DL+++ +L ++ F C
Sbjct: 180 SLQRQVEFLSMKLSTISPELNSDLDLQDILCSQDARSAFLGC 221
>gi|115480081|ref|NP_001063634.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|113631867|dbj|BAF25548.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|125606291|gb|EAZ45327.1| hypothetical protein OsJ_29973 [Oryza sativa Japonica Group]
gi|215694666|dbj|BAG89857.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/145 (52%), Positives = 104/145 (71%), Gaps = 12/145 (8%)
Query: 210 TSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDN 269
TS V D++P+ +K ++P+ ++T + ++S +K++ K K +
Sbjct: 47 TSSVVLDTSPQDKK--RKPREEDTASLNS----------AHSKEAKENGRKRGGKKHSRD 94
Query: 270 SKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLD 329
E P+ +IHVRARRGQATDSHSLAERVRRE+ISERM+ LQ LVPGC+KVTGKA++LD
Sbjct: 95 QMEEEAPQGFIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILD 154
Query: 330 EIINYVQSLQRQVEFLSMKLATVNP 354
EIINYVQSLQ QVEFLSM++A+++P
Sbjct: 155 EIINYVQSLQNQVEFLSMRIASLSP 179
>gi|308080104|ref|NP_001183737.1| uncharacterized protein LOC100502330 [Zea mays]
gi|238014262|gb|ACR38166.1| unknown [Zea mays]
gi|413921691|gb|AFW61623.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413921692|gb|AFW61624.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 319
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/148 (56%), Positives = 103/148 (69%), Gaps = 11/148 (7%)
Query: 210 TSQTVTDSN---PRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKT 266
TS V DS RKRK+ A + P PK + ++S S R K+ +++ +
Sbjct: 64 TSSAVVDSASPMERKRKATAEDSAAISSP--QPK---DCKQESKSRRGKRPRKETEEKSS 118
Query: 267 KDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAV 326
D E K YIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ LVPGC+KVTGKA+
Sbjct: 119 TDED---EASKGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKAM 175
Query: 327 MLDEIINYVQSLQRQVEFLSMKLATVNP 354
+LDEIINYVQSLQ QVEFLSM++A+++P
Sbjct: 176 VLDEIINYVQSLQNQVEFLSMRIASMSP 203
>gi|413923611|gb|AFW63543.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 352
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/95 (75%), Positives = 83/95 (87%), Gaps = 1/95 (1%)
Query: 278 DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQS 337
DYIHVRARRGQATDSHSLAERVRRE+ISERM++LQ+LVPGC+KVTGKA MLDEIINYVQS
Sbjct: 139 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 198
Query: 338 LQRQVEFLSMKLATVNPRMDLNM-EALLSKDLFQS 371
LQ+QVEFLSMK+A NP + ++ E L + L QS
Sbjct: 199 LQKQVEFLSMKIAASNPVVSFDIVEDLFGRQLKQS 233
>gi|388498252|gb|AFK37192.1| unknown [Lotus japonicus]
Length = 220
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/93 (77%), Positives = 80/93 (86%), Gaps = 2/93 (2%)
Query: 278 DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQS 337
DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNKV GKA++LDEIINY+QS
Sbjct: 87 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 146
Query: 338 LQRQVEFLSMKLATVNPRMDLN--MEALLSKDL 368
LQ QVEFLSMKL VN R ++N ++ SKD+
Sbjct: 147 LQHQVEFLSMKLEAVNSRFNMNPTIDCFSSKDV 179
>gi|449454949|ref|XP_004145216.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 340
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/86 (84%), Positives = 78/86 (90%), Gaps = 5/86 (5%)
Query: 279 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 338
YIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC+KVTGKA+MLDEIINYVQSL
Sbjct: 145 YIHVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSL 204
Query: 339 QRQVEFLSMKLATVNP-----RMDLN 359
Q QVEFLSMKLA++NP RMDL+
Sbjct: 205 QNQVEFLSMKLASLNPIFFDFRMDLD 230
>gi|15241896|ref|NP_201067.1| transcription factor bHLH79 [Arabidopsis thaliana]
gi|75311612|sp|Q9LV17.1|BH079_ARATH RecName: Full=Transcription factor bHLH79; AltName: Full=Basic
helix-loop-helix protein 79; Short=AtbHLH79; Short=bHLH
79; AltName: Full=Transcription factor EN 81; AltName:
Full=bHLH transcription factor bHLH079
gi|8809657|dbj|BAA97208.1| unnamed protein product [Arabidopsis thaliana]
gi|18175779|gb|AAL59926.1| unknown protein [Arabidopsis thaliana]
gi|21536811|gb|AAM61143.1| unknown [Arabidopsis thaliana]
gi|21689825|gb|AAM67556.1| unknown protein [Arabidopsis thaliana]
gi|332010247|gb|AED97630.1| transcription factor bHLH79 [Arabidopsis thaliana]
Length = 281
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 78/88 (88%), Gaps = 1/88 (1%)
Query: 266 TKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKA 325
T+ +KP EPPKDYIHVRARRGQATD HSLAER RREKISE+M LQD++PGCNK+ GKA
Sbjct: 138 TEQKNKP-EPPKDYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKA 196
Query: 326 VMLDEIINYVQSLQRQVEFLSMKLATVN 353
++LDEIINY+QSLQRQVEFLSMKL VN
Sbjct: 197 LVLDEIINYIQSLQRQVEFLSMKLEVVN 224
>gi|297797231|ref|XP_002866500.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312335|gb|EFH42759.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 282
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 78/88 (88%), Gaps = 1/88 (1%)
Query: 266 TKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKA 325
T+ +KP EPPKDYIHVRARRGQATD HSLAER RREKISE+M LQD++PGCNK+ GKA
Sbjct: 139 TEQKNKP-EPPKDYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKA 197
Query: 326 VMLDEIINYVQSLQRQVEFLSMKLATVN 353
++LDEIINY+QSLQRQVEFLSMKL VN
Sbjct: 198 LVLDEIINYIQSLQRQVEFLSMKLEVVN 225
>gi|108707005|gb|ABF94800.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 809
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/134 (56%), Positives = 100/134 (74%), Gaps = 13/134 (9%)
Query: 247 EDSNSM--RSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKI 304
E++ M R E+ + + D S+ ++Y+HVRA+RGQAT+SHSLAER RREKI
Sbjct: 596 EETGEMPQRELSMEHAGEKAGDADASR-----EEYVHVRAKRGQATNSHSLAERFRREKI 650
Query: 305 SERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM--DLNMEA 362
+ERMK LQDLVPGCNK+TGKA+MLDEIINYVQSLQRQVEFLSMKL+T++P + DL+++
Sbjct: 651 NERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSTISPELNSDLDLQD 710
Query: 363 LL----SKDLFQSC 372
+L ++ F C
Sbjct: 711 ILCSQDARSAFLGC 724
>gi|357520555|ref|XP_003630566.1| BHLH transcription factor [Medicago truncatula]
gi|355524588|gb|AET05042.1| BHLH transcription factor [Medicago truncatula]
Length = 327
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/96 (75%), Positives = 82/96 (85%), Gaps = 3/96 (3%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
E P YIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC++VTGKA++LDEIIN
Sbjct: 137 EVPTGYIHVRARRGQATDSHSLAERVRREKISERMKILQQLVPGCDRVTGKALVLDEIIN 196
Query: 334 YVQSLQRQVEFLSMKLATVNP---RMDLNMEALLSK 366
YVQSLQ QVEFLSMKLA+VNP ++++ LL +
Sbjct: 197 YVQSLQNQVEFLSMKLASVNPIFFDFAMDLDTLLVR 232
>gi|108707003|gb|ABF94798.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 810
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/134 (56%), Positives = 100/134 (74%), Gaps = 13/134 (9%)
Query: 247 EDSNSM--RSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKI 304
E++ M R E+ + + D S+ ++Y+HVRA+RGQAT+SHSLAER RREKI
Sbjct: 596 EETGEMPQRELSMEHAGEKAGDADASR-----EEYVHVRAKRGQATNSHSLAERFRREKI 650
Query: 305 SERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM--DLNMEA 362
+ERMK LQDLVPGCNK+TGKA+MLDEIINYVQSLQRQVEFLSMKL+T++P + DL+++
Sbjct: 651 NERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSTISPELNSDLDLQD 710
Query: 363 LL----SKDLFQSC 372
+L ++ F C
Sbjct: 711 ILCSQDARSAFLGC 724
>gi|224094803|ref|XP_002310242.1| predicted protein [Populus trichocarpa]
gi|222853145|gb|EEE90692.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/97 (78%), Positives = 83/97 (85%), Gaps = 3/97 (3%)
Query: 258 ENKSDSSKTKDNSKPVEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVP 316
E +DSSK +N K PK DYIHVRARRGQATDSHSLAER RREKIS++MK LQDLVP
Sbjct: 14 EISADSSK--ENQKTSALPKTDYIHVRARRGQATDSHSLAERARREKISKKMKCLQDLVP 71
Query: 317 GCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 353
GCNK+TG+A MLDEIINYVQSLQRQVEF+SMKLA VN
Sbjct: 72 GCNKITGRAGMLDEIINYVQSLQRQVEFISMKLAAVN 108
>gi|449473858|ref|XP_004154003.1| PREDICTED: uncharacterized protein LOC101205943 [Cucumis sativus]
gi|449518641|ref|XP_004166345.1| PREDICTED: uncharacterized LOC101205943 [Cucumis sativus]
Length = 372
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/86 (84%), Positives = 78/86 (90%), Gaps = 5/86 (5%)
Query: 279 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 338
YIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC+KVTGKA+MLDEIINYVQSL
Sbjct: 177 YIHVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSL 236
Query: 339 QRQVEFLSMKLATVNP-----RMDLN 359
Q QVEFLSMKLA++NP RMDL+
Sbjct: 237 QNQVEFLSMKLASLNPIFFDFRMDLD 262
>gi|414869720|tpg|DAA48277.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 252
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/155 (52%), Positives = 109/155 (70%), Gaps = 11/155 (7%)
Query: 210 TSQTVTDSNPRKRKSIQR--PKAKETPPTSDPKVV--AENPED------SNSMRSKQDEN 259
+S V D++P+ + S P ++ P D + A++ ED S S R K+ N
Sbjct: 58 SSSAVVDTSPQPQGSAAAASPMERKRKPAEDSATLSSAQSKEDCKQQQESKSRRGKRPHN 117
Query: 260 KSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCN 319
K +++ K ++ E + YIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ LVPGC+
Sbjct: 118 KEANTEEKSATED-EATRGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCD 176
Query: 320 KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 354
KVTGKA++LDEIINYVQSLQ QVEFLSM++A+++P
Sbjct: 177 KVTGKALILDEIINYVQSLQNQVEFLSMRIASMSP 211
>gi|27311243|gb|AAO00689.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 776
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/134 (56%), Positives = 100/134 (74%), Gaps = 13/134 (9%)
Query: 247 EDSNSM--RSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKI 304
E++ M R E+ + + D S+ ++Y+HVRA+RGQAT+SHSLAER RREKI
Sbjct: 596 EETGEMPQRELSMEHAGEKAGDADASR-----EEYVHVRAKRGQATNSHSLAERFRREKI 650
Query: 305 SERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM--DLNMEA 362
+ERMK LQDLVPGCNK+TGKA+MLDEIINYVQSLQRQVEFLSMKL+T++P + DL+++
Sbjct: 651 NERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSTISPELNSDLDLQD 710
Query: 363 LL----SKDLFQSC 372
+L ++ F C
Sbjct: 711 ILCSQDARSAFLGC 724
>gi|242079823|ref|XP_002444680.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
gi|241941030|gb|EES14175.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
Length = 293
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/153 (52%), Positives = 105/153 (68%), Gaps = 17/153 (11%)
Query: 210 TSQTVTDSNP--------RKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKS 261
+S V D++P RKRK+ + + + D K ++S S R K+ ++
Sbjct: 51 SSSAVVDTSPQDSASPMERKRKATEDSATLSSAQSKDCK-----QQESKSKRGKRPNKET 105
Query: 262 DSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKV 321
+ T ++ E K YIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ LVPGC+KV
Sbjct: 106 EEKSTTED----EATKGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKV 161
Query: 322 TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 354
TGKA++LDEIINYVQSLQ QVEFLSM++A+++P
Sbjct: 162 TGKALILDEIINYVQSLQNQVEFLSMRIASMSP 194
>gi|312281887|dbj|BAJ33809.1| unnamed protein product [Thellungiella halophila]
Length = 304
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/201 (46%), Positives = 118/201 (58%), Gaps = 31/201 (15%)
Query: 238 DPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAE 297
+ K + E SM+ KS+ S T+ +S+ +P DYIHVRARRG+ATD HSLAE
Sbjct: 104 EKKKIKTEAETETSMK-----GKSNMSNTETSSEIQKP--DYIHVRARRGEATDRHSLAE 156
Query: 298 RVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMD 357
R RREKIS++MK LQD+VPGC KVTGKA MLDEIINYVQSLQ+QVEFLSMKL+ +NP ++
Sbjct: 157 RARREKISKKMKCLQDIVPGCTKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVLNPELE 216
Query: 358 LNMEALLSKDLFQSCGYVQHSLYPGD-----------CSVQTFPSRYQPQQGSHLTSSGI 406
++ L +K Q Y D +Q+FP QQGS L S I
Sbjct: 217 FHINELSTK---------QFQAYFADLPEAVSKQSVMADLQSFPLH---QQGS-LDYSVI 263
Query: 407 NNNAENQFSINALNSSLHRNH 427
N++ I S+ H
Sbjct: 264 NSSQTTSLGIKDQTSASWETH 284
>gi|226496555|ref|NP_001150926.1| bHLH transcription factor GBOF-1 [Zea mays]
gi|195642998|gb|ACG40967.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 306
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 103/150 (68%), Gaps = 5/150 (3%)
Query: 210 TSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSK-QDENKSDSSKTKD 268
TS V D++PR + + T P D + + ++S S + K+ K
Sbjct: 43 TSSGVLDTSPRGGGADSGGRKARTKPREDSASASFSFSSAHSKDSSSKGSTKNRGGKRGR 102
Query: 269 NSKPVE----PPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGK 324
+SK VE PK YIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ LVPGC+KVTGK
Sbjct: 103 SSKEVEDDEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGK 162
Query: 325 AVMLDEIINYVQSLQRQVEFLSMKLATVNP 354
A++LDEIINYVQSLQ QVEFLSMK+A+++P
Sbjct: 163 ALVLDEIINYVQSLQNQVEFLSMKIASLSP 192
>gi|326519344|dbj|BAJ96671.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 279
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 110/164 (67%), Gaps = 14/164 (8%)
Query: 191 PESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSN 250
PE A S+EGSS+ T T S +KRK PK T + A + E
Sbjct: 28 PEDAAAAASREGSSVVLD-TPLVATASMEKKRK----PKEDTTASLNS----AHSKETKE 78
Query: 251 SMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKF 310
S R K+ K D K+ ++ E PK YIHVRARRGQATDSHSL+ERVRRE+ISERM+
Sbjct: 79 STR-KRGGKKQD----KETAEEEEEPKGYIHVRARRGQATDSHSLSERVRRERISERMRM 133
Query: 311 LQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 354
LQ LVPGC+KVTGKA++LDEIINYV+SLQ QVEFLSM++A+++P
Sbjct: 134 LQSLVPGCDKVTGKALILDEIINYVRSLQNQVEFLSMRIASLSP 177
>gi|414865634|tpg|DAA44191.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 262
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/108 (65%), Positives = 87/108 (80%), Gaps = 9/108 (8%)
Query: 277 KDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQ 336
+DY+HVRA+RGQAT+SHSLAER RREKI+ERMK LQDLVPGCNK+TGKA+MLDEIINYVQ
Sbjct: 93 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 152
Query: 337 SLQRQVEFLSMKLATVNPRM--DLNMEALLSKDLFQSCGYVQHSLYPG 382
SLQRQ+EFLSMKL+ + P + DL+++ +L C S +PG
Sbjct: 153 SLQRQIEFLSMKLSAIGPGLNCDLDLQDIL-------CTQDASSAFPG 193
>gi|242062782|ref|XP_002452680.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
gi|241932511|gb|EES05656.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
Length = 359
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/94 (75%), Positives = 82/94 (87%), Gaps = 1/94 (1%)
Query: 278 DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQS 337
DYIHVRARRGQATDSHSLAERVRRE+ISERM++LQ+LVPGC+KVTGKA MLDEIINYVQS
Sbjct: 149 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 208
Query: 338 LQRQVEFLSMKLATVNPRMDLNM-EALLSKDLFQ 370
LQ+QVEFLSMK+A NP + ++ E L + L Q
Sbjct: 209 LQKQVEFLSMKIAASNPVVSFDIVEDLFGRQLKQ 242
>gi|168024075|ref|XP_001764562.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684140|gb|EDQ70544.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 149 bits (376), Expect = 3e-33, Method: Composition-based stats.
Identities = 74/104 (71%), Positives = 89/104 (85%), Gaps = 2/104 (1%)
Query: 265 KTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGK 324
K K+ +P P + +IHVRARRGQAT+SHSLAER RREKIS RMKFLQ LVPGC++VTGK
Sbjct: 4 KVKNKEQP--PKQGFIHVRARRGQATNSHSLAERARREKISNRMKFLQALVPGCSEVTGK 61
Query: 325 AVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
AVML+EIINYV+SLQRQ+EFLSMKLA V+PR+D N+E LL ++
Sbjct: 62 AVMLEEIINYVKSLQRQIEFLSMKLAAVDPRLDTNVEGLLKMEV 105
>gi|223945659|gb|ACN26913.1| unknown [Zea mays]
Length = 267
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/108 (65%), Positives = 87/108 (80%), Gaps = 9/108 (8%)
Query: 277 KDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQ 336
+DY+HVRA+RGQAT+SHSLAER RREKI+ERMK LQDLVPGCNK+TGKA+MLDEIINYVQ
Sbjct: 119 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 178
Query: 337 SLQRQVEFLSMKLATVNPRM--DLNMEALLSKDLFQSCGYVQHSLYPG 382
SLQRQ+EFLSMKL+ + P + DL+++ +L C S +PG
Sbjct: 179 SLQRQIEFLSMKLSAIGPGLNCDLDLQDIL-------CTQDASSAFPG 219
>gi|414865637|tpg|DAA44194.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 289
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/108 (65%), Positives = 87/108 (80%), Gaps = 9/108 (8%)
Query: 277 KDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQ 336
+DY+HVRA+RGQAT+SHSLAER RREKI+ERMK LQDLVPGCNK+TGKA+MLDEIINYVQ
Sbjct: 119 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 178
Query: 337 SLQRQVEFLSMKLATVNPRM--DLNMEALLSKDLFQSCGYVQHSLYPG 382
SLQRQ+EFLSMKL+ + P + DL+++ +L C S +PG
Sbjct: 179 SLQRQIEFLSMKLSAIGPGLNCDLDLQDIL-------CTQDASSAFPG 219
>gi|212721128|ref|NP_001132785.1| uncharacterized protein LOC100194274 [Zea mays]
gi|194695392|gb|ACF81780.1| unknown [Zea mays]
gi|414589942|tpg|DAA40513.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 305
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/151 (54%), Positives = 102/151 (67%), Gaps = 6/151 (3%)
Query: 210 TSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSK---QDENKSDSSKT 266
TS V D++PR + + T P D + + S++ + K+ K
Sbjct: 43 TSSGVLDTSPRGGGADSGGRKAPTKPREDSASASASFSFSSAHSKDSSSKGSTKNRGGKR 102
Query: 267 KDNSKPV---EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 323
+SK V E PK YIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ LVPGC+KVTG
Sbjct: 103 GRSSKEVDEEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTG 162
Query: 324 KAVMLDEIINYVQSLQRQVEFLSMKLATVNP 354
KA++LDEIINYVQSLQ QVEFLSMK+A+++P
Sbjct: 163 KALVLDEIINYVQSLQNQVEFLSMKIASLSP 193
>gi|414589941|tpg|DAA40512.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/151 (54%), Positives = 102/151 (67%), Gaps = 6/151 (3%)
Query: 210 TSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSK---QDENKSDSSKT 266
TS V D++PR + + T P D + + S++ + K+ K
Sbjct: 33 TSSGVLDTSPRGGGADSGGRKAPTKPREDSASASASFSFSSAHSKDSSSKGSTKNRGGKR 92
Query: 267 KDNSKPV---EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 323
+SK V E PK YIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ LVPGC+KVTG
Sbjct: 93 GRSSKEVDEEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTG 152
Query: 324 KAVMLDEIINYVQSLQRQVEFLSMKLATVNP 354
KA++LDEIINYVQSLQ QVEFLSMK+A+++P
Sbjct: 153 KALVLDEIINYVQSLQNQVEFLSMKIASLSP 183
>gi|363808336|ref|NP_001242250.1| transcription factor bHLH48-like [Glycine max]
gi|256002927|gb|ACU52707.1| bHLH transcription factor PTF1 [Glycine max]
Length = 366
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/224 (41%), Positives = 127/224 (56%), Gaps = 25/224 (11%)
Query: 144 NLPIPAADPGFAERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNADSKEGS 203
NL P+ + ERAA+ S FAG NS +++ + ST + N + S
Sbjct: 87 NLTFPS-NVALIERAAKFSVFAGE----NSPPPPGEARLIPAGTGSTLDRVKNEPQETDS 141
Query: 204 SLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDS 263
+ +S+ S+P +IQR ++ + S +S DE D
Sbjct: 142 NPCS--SSRLGCISDPAVENNIQRTAKRKE-------REKKAKGSSKKRKSAADETSGDG 192
Query: 264 SKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 323
K Y+HVR RRGQATDSHSLAER RREKI+ RMK LQ+LVPGC+K++G
Sbjct: 193 EKLP-----------YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISG 241
Query: 324 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKD 367
A++LDEIIN+VQSLQRQVE LSMKLA VNPR+D ++++LL+ D
Sbjct: 242 TAMVLDEIINHVQSLQRQVEILSMKLAAVNPRIDFSLDSLLATD 285
>gi|356534621|ref|XP_003535851.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 357
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/280 (37%), Positives = 150/280 (53%), Gaps = 44/280 (15%)
Query: 144 NLPIPAADPGFAERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNADSKEGS 203
NL P+ + ERAAR S FAG Q + ++S S ++L PE+++N S G
Sbjct: 85 NLTFPS-NAALIERAARFSVFAG-QNSNSNSNSPEVKREL-------PETDSNPSSTHGG 135
Query: 204 SLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDS 263
++ + + NP K+ +R + ++ S K S S+ + DE+ D
Sbjct: 136 GGGGSVSDLAMENKNP---KTAKRKEREKKVKASSRK--------SKSVAAATDESSGDG 184
Query: 264 SKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 323
K Y+HVR RRGQATDSHSLAER RREKI+ RMK LQ+LVPGCNK++G
Sbjct: 185 EKLP-----------YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISG 233
Query: 324 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGD 383
A++LD+IIN+VQSLQ +VE LSMKLA VNP +D N+++LL+ + + P D
Sbjct: 234 TALVLDKIINHVQSLQNEVEILSMKLAAVNPVIDFNLDSLLATE----------GVTPMD 283
Query: 384 CSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSL 423
C+ FP P + +G + + +A + L
Sbjct: 284 CN---FPPTVAPVMWPEIPQNGNRQQYQQPWQFDAFHQPL 320
>gi|414865636|tpg|DAA44193.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 275
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/108 (65%), Positives = 87/108 (80%), Gaps = 9/108 (8%)
Query: 277 KDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQ 336
+DY+HVRA+RGQAT+SHSLAER RREKI+ERMK LQDLVPGCNK+TGKA+MLDEIINYVQ
Sbjct: 123 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 182
Query: 337 SLQRQVEFLSMKLATVNPRM--DLNMEALLSKDLFQSCGYVQHSLYPG 382
SLQRQ+EFLSMKL+ + P + DL+++ +L C S +PG
Sbjct: 183 SLQRQIEFLSMKLSAIGPGLNCDLDLQDIL-------CTQDASSAFPG 223
>gi|357113290|ref|XP_003558437.1| PREDICTED: transcription factor bHLH74-like [Brachypodium
distachyon]
Length = 296
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/142 (57%), Positives = 101/142 (71%), Gaps = 15/142 (10%)
Query: 247 EDSNSMRSKQDENKSDSSKTKDNSKPVEPPK----DYIHVRARRGQATDSHSLAERVRRE 302
E S+SM S+ E SK + NS+ + DY+H+RA+RGQAT++HSLAER RRE
Sbjct: 81 EGSSSMHSQ--EGTGAVSKREVNSEKAGDAESNREDYVHIRAKRGQATNNHSLAERFRRE 138
Query: 303 KISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM--DLNM 360
KI+ERMK LQDLVPGCNK+TGKA+MLDEIINYVQSLQRQVEFLSMKL+ V+P + DL+
Sbjct: 139 KINERMKHLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSAVSPELNCDLDF 198
Query: 361 EALLSKDLFQSCGYVQHSLYPG 382
+ +L C S +PG
Sbjct: 199 QDIL-------CPQDARSAFPG 213
>gi|119655907|gb|ABL86246.1| BHLHogu [Brassica rapa subsp. chinensis]
Length = 122
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/116 (60%), Positives = 89/116 (76%)
Query: 253 RSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQ 312
R + D+ S+K K S Y+HVRARRGQATDSHSLAER RREKI+ RMK L+
Sbjct: 4 RKELDKKVKGSTKMKSKSSEENGKLPYVHVRARRGQATDSHSLAERARREKINARMKLLR 63
Query: 313 DLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
+LVPGC+K+ G A++LDEIIN+VQSLQRQVE LSM+LA VNPR+D N++ LL+ ++
Sbjct: 64 ELVPGCDKIQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDFNLDTLLASEV 119
>gi|356504821|ref|XP_003521193.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 372
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 77/158 (48%), Positives = 103/158 (65%), Gaps = 17/158 (10%)
Query: 279 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 338
Y+HVR RRGQATDSHSLAER RREKI+ RMK LQ+LVPGC+K++G A++LDEIIN+VQSL
Sbjct: 203 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSL 262
Query: 339 QRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQG 398
QRQVE LSMKLA VNPR+D ++++LL+ D + ++L PS P
Sbjct: 263 QRQVEILSMKLAAVNPRIDFSLDSLLATD---GASLMDNNL----------PSMVTPLMW 309
Query: 399 SHLTSSGINNNAENQFSINALNSSLHR----NHNIQLP 432
+ +G + + Q+ ++A + L NHN P
Sbjct: 310 PEIPLNGNRQHYQQQWQLDAFHQPLWEREEVNHNFMTP 347
>gi|414865635|tpg|DAA44192.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 185
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/85 (75%), Positives = 79/85 (92%)
Query: 277 KDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQ 336
+DY+HVRA+RGQAT+SHSLAER RREKI+ERMK LQDLVPGCNK+TGKA+MLDEIINYVQ
Sbjct: 93 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 152
Query: 337 SLQRQVEFLSMKLATVNPRMDLNME 361
SLQRQ+EFLSMKL+ + P ++ +++
Sbjct: 153 SLQRQIEFLSMKLSAIGPGLNCDLD 177
>gi|293333598|ref|NP_001167725.1| uncharacterized protein LOC100381413 [Zea mays]
gi|223943625|gb|ACN25896.1| unknown [Zea mays]
gi|414865638|tpg|DAA44195.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 211
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/85 (75%), Positives = 79/85 (92%)
Query: 277 KDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQ 336
+DY+HVRA+RGQAT+SHSLAER RREKI+ERMK LQDLVPGCNK+TGKA+MLDEIINYVQ
Sbjct: 119 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 178
Query: 337 SLQRQVEFLSMKLATVNPRMDLNME 361
SLQRQ+EFLSMKL+ + P ++ +++
Sbjct: 179 SLQRQIEFLSMKLSAIGPGLNCDLD 203
>gi|312281897|dbj|BAJ33814.1| unnamed protein product [Thellungiella halophila]
Length = 375
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/217 (45%), Positives = 126/217 (58%), Gaps = 32/217 (14%)
Query: 154 FAERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQT 213
ERAAR S A Q N N S + SS P SN++A+ L T
Sbjct: 98 LMERAARFSVIATEQQNGNVSG--------ETTTSSVP-SNSSAN------LDRVKTEPA 142
Query: 214 VTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRS-KQDENKSDSSKTKDNSKP 272
TDS+ R SD V ++P S + RS K+ E + + +K
Sbjct: 143 ETDSSQRL--------------VSDQAVENQSPCPSQNNRSGKRKEFEKKVKSSTKKNKS 188
Query: 273 VEPPKD--YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDE 330
E + Y+HVRARRGQATDSHSLAER RREKI+ RMK LQ+LVPGC+K+ G A++LDE
Sbjct: 189 SEETEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDE 248
Query: 331 IINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKD 367
IIN+VQSLQRQVE LSM+LA VNPR+D N++ +L+ +
Sbjct: 249 IINHVQSLQRQVEMLSMRLAAVNPRIDFNLDTILASE 285
>gi|356511528|ref|XP_003524477.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 324
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/90 (81%), Positives = 78/90 (86%), Gaps = 1/90 (1%)
Query: 266 TKDNSKPVE-PPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGK 324
TKD E PP YIHVRARRGQATDSHSLAERVRREKIS+RM LQ LVPGC+KVTGK
Sbjct: 121 TKDKKIGAEDPPTGYIHVRARRGQATDSHSLAERVRREKISKRMTTLQRLVPGCDKVTGK 180
Query: 325 AVMLDEIINYVQSLQRQVEFLSMKLATVNP 354
A++LDEIINYVQSLQ QVEFLSMKLA+VNP
Sbjct: 181 ALVLDEIINYVQSLQNQVEFLSMKLASVNP 210
>gi|147821091|emb|CAN75381.1| hypothetical protein VITISV_027596 [Vitis vinifera]
Length = 328
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 98/172 (56%), Gaps = 45/172 (26%)
Query: 242 VAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPK-DYIHVRARRGQATDSHSLAERV- 299
++ P+++ +++ + + K + SKP E K DYIHVRARRGQATDSHSLAERV
Sbjct: 116 ISRTPDENGGSKAELEASSVAGEKPAEESKPAEQSKQDYIHVRARRGQATDSHSLAERVM 175
Query: 300 -------------------------------------------RREKISERMKFLQDLVP 316
RREKISERMK LQDLVP
Sbjct: 176 QFYTLLIFCFLVVPQMPKLKRIGLSWNSRSRCRCIGVSVYINARREKISERMKILQDLVP 235
Query: 317 GCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
GCNKV GKA++LDEIINY+QSLQRQVEFLSMKL VN RM+ +E KDL
Sbjct: 236 GCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNHTVEGFPLKDL 287
>gi|297824189|ref|XP_002879977.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
gi|297325816|gb|EFH56236.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
Length = 326
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/178 (47%), Positives = 113/178 (63%), Gaps = 28/178 (15%)
Query: 240 KVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKD------------YIHVRARRG 287
+V AE P +++SM Q++N S S K KD K V+ Y+HVRARRG
Sbjct: 132 RVKAE-PAETDSMVENQNQNYS-SGKRKDREKKVKSSTKKTKSSVESDKLPYVHVRARRG 189
Query: 288 QATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
QATD+HSLAER RREKI+ RMK LQ+LVPGC+K+ G A++LDEIIN+VQSLQRQVE LSM
Sbjct: 190 QATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQVEMLSM 249
Query: 348 KLATVNPRMDLNMEALLSKD-------LFQSCGYVQHSLYPGDCSVQTFPSRYQPQQG 398
+LA VNPR++ N++++L+ + F Y Q +P F +QP+ G
Sbjct: 250 RLAAVNPRVEFNLDSILASENGSLMDGNFNGESYHQLQQWP-------FDGYHQPEWG 300
>gi|449450566|ref|XP_004143033.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/106 (67%), Positives = 86/106 (81%), Gaps = 1/106 (0%)
Query: 260 KSDSSKTKDNSKPVEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC 318
K DS K K S+ V+ PK+ YIHV+ARRG+A ++HSLAERVRREKISERMK LQ LVPGC
Sbjct: 182 KPDSKKAKGGSQNVQAPKENYIHVQARRGRAANNHSLAERVRREKISERMKLLQQLVPGC 241
Query: 319 NKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALL 364
+++TGK V+LDEIINYVQSLQ+QVEFLSMKLA+V L E +L
Sbjct: 242 HQITGKTVVLDEIINYVQSLQQQVEFLSMKLASVGLESSLEAEQIL 287
>gi|20127060|gb|AAM10949.1|AF488593_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 379
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/89 (71%), Positives = 79/89 (88%)
Query: 279 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 338
Y+HVRARRGQATDSHSLAER RREKI+ RMK LQ+LVPGC+K+ G A++LDEIIN+VQSL
Sbjct: 201 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSL 260
Query: 339 QRQVEFLSMKLATVNPRMDLNMEALLSKD 367
QRQVE LSM+LA VNPR+D N++ +L+ +
Sbjct: 261 QRQVEMLSMRLAAVNPRIDFNLDTILASE 289
>gi|30695836|ref|NP_850745.1| transcription factor bHLH60 [Arabidopsis thaliana]
gi|6729523|emb|CAB67608.1| putative protein [Arabidopsis thaliana]
gi|22655000|gb|AAM98091.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|27764962|gb|AAO23602.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|332646182|gb|AEE79703.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 379
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/89 (71%), Positives = 79/89 (88%)
Query: 279 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 338
Y+HVRARRGQATDSHSLAER RREKI+ RMK LQ+LVPGC+K+ G A++LDEIIN+VQSL
Sbjct: 201 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSL 260
Query: 339 QRQVEFLSMKLATVNPRMDLNMEALLSKD 367
QRQVE LSM+LA VNPR+D N++ +L+ +
Sbjct: 261 QRQVEMLSMRLAAVNPRIDFNLDTILASE 289
>gi|30688981|ref|NP_850368.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|75304461|sp|Q8VZ02.1|BH048_ARATH RecName: Full=Transcription factor bHLH48; AltName: Full=Basic
helix-loop-helix protein 48; Short=AtbHLH48; Short=bHLH
48; AltName: Full=Transcription factor EN 97; AltName:
Full=bHLH transcription factor bHLH048
gi|17529250|gb|AAL38852.1| unknown protein [Arabidopsis thaliana]
gi|20465971|gb|AAM20171.1| unknown protein [Arabidopsis thaliana]
gi|51971465|dbj|BAD44397.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|330255008|gb|AEC10102.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 327
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/127 (55%), Positives = 92/127 (72%), Gaps = 14/127 (11%)
Query: 279 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 338
Y+HVRARRGQATD+HSLAER RREKI+ RMK LQ+LVPGC+K+ G A++LDEIIN+VQ+L
Sbjct: 182 YVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTL 241
Query: 339 QRQVEFLSMKLATVNPRMDLNMEALLSKD-------LFQSCGYVQHSLYPGDCSVQTFPS 391
QRQVE LSM+LA VNPR+D N++++L+ + F + Y Q +P F
Sbjct: 242 QRQVEMLSMRLAAVNPRIDFNLDSILASENGSLMDGSFNAESYHQLQQWP-------FDG 294
Query: 392 RYQPQQG 398
+QP+ G
Sbjct: 295 YHQPEWG 301
>gi|223702424|gb|ACN21643.1| putative basic helix-loop-helix protein BHLH6 [Lotus japonicus]
Length = 364
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/138 (60%), Positives = 95/138 (68%), Gaps = 22/138 (15%)
Query: 259 NKSDSSKTKDNSKPVEPPK-DYIHVRARRGQATDSHSLAERV----------------RR 301
N SD TK + EPPK DYIHVRARRGQATDSHS+AERV RR
Sbjct: 102 NNSDEQSTKPSES--EPPKQDYIHVRARRGQATDSHSIAERVIHFSLCLSISYLLLVARR 159
Query: 302 EKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLN-- 359
EKISERMK LQDLVPGCNK+ GKA++LDEIINY+QSLQ QVEFLSMKL VN R +LN
Sbjct: 160 EKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANLNPT 219
Query: 360 MEALLSKDLFQS-CGYVQ 376
E SKD ++ C +++
Sbjct: 220 NEGFPSKDFQRTRCTWMR 237
>gi|223702428|gb|ACN21645.1| putative basic helix-loop-helix protein BHLH8 [Lotus japonicus]
Length = 309
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/95 (74%), Positives = 81/95 (85%), Gaps = 3/95 (3%)
Query: 275 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINY 334
P YIHVRARRGQATDSHSLAERVRREKISERM LQ LVPGC+KVTGKA++L+EIINY
Sbjct: 112 PSTGYIHVRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINY 171
Query: 335 VQSLQRQVEFLSMKLATVNPR---MDLNMEALLSK 366
VQSLQ QVEFLSMKLA+VNP M ++++ LL +
Sbjct: 172 VQSLQHQVEFLSMKLASVNPMLFDMAMDLDNLLVR 206
>gi|219362473|ref|NP_001136461.1| uncharacterized protein LOC100216572 [Zea mays]
gi|194695798|gb|ACF81983.1| unknown [Zea mays]
Length = 366
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/77 (87%), Positives = 74/77 (96%)
Query: 278 DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQS 337
DYIHVRARRGQATDSHSLAERVRRE+ISERM++LQ+LVPGC+KVTGKA MLDEIINYVQS
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 338 LQRQVEFLSMKLATVNP 354
LQ+QVEFLSMK+A NP
Sbjct: 202 LQKQVEFLSMKIAASNP 218
>gi|413954819|gb|AFW87468.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 372
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/135 (52%), Positives = 98/135 (72%), Gaps = 7/135 (5%)
Query: 241 VVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVR 300
++A P+ + + K E K + D+ KP Y+HVRARRGQATDSHSLAER R
Sbjct: 158 LIAPWPQGKAAKKGKTAEEKL-AGGDGDDEKPA-----YVHVRARRGQATDSHSLAERAR 211
Query: 301 REKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDL-N 359
REKI+ RM+ L++LVPGC+KV+G A++LDEIIN+VQSLQRQVE+LSM+LA VNPR+D
Sbjct: 212 REKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGG 271
Query: 360 MEALLSKDLFQSCGY 374
+++ L+ + + G+
Sbjct: 272 LDSFLTTECGRIAGF 286
>gi|357509815|ref|XP_003625196.1| Transcription factor bHLH60 [Medicago truncatula]
gi|124360133|gb|ABN08149.1| Helix-loop-helix DNA-binding [Medicago truncatula]
gi|355500211|gb|AES81414.1| Transcription factor bHLH60 [Medicago truncatula]
Length = 340
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 106/264 (40%), Positives = 133/264 (50%), Gaps = 51/264 (19%)
Query: 115 NTCCYSTPLNSPPLPKLNLSMIRGSK------SSNNLPIPAADPGFAERAARLSCFAGSQ 168
N ++ L PP + L + K S+ NL P + ERAA+ S FAG
Sbjct: 35 NASSFTALLELPPTLAVELLHLPEQKPYLPNSSNGNLTFPT-NAALIERAAKFSVFAGE- 92
Query: 169 MNMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRP 228
NS S DS+ V ES N + TDSNP +
Sbjct: 93 ---NS--SPGDSRLFPV------ESVKNEPQE--------------TDSNPCSTQEC--- 124
Query: 229 KAKETPPTSDPKVVAENPEDSN-----SMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVR 283
SDP AEN N + + + S D + Y+HVR
Sbjct: 125 -------VSDP---AENKNQRNVKRKEREKKGKASSSKKSKSIADETSGAGEKLPYVHVR 174
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
RRGQATDSHSLAER RREKI+ RMK LQ+LVPGC K++G A++LDEIIN+VQ+LQRQVE
Sbjct: 175 VRRGQATDSHSLAERARREKINARMKLLQELVPGCEKISGTALVLDEIINHVQTLQRQVE 234
Query: 344 FLSMKLATVNPRMDLNMEALLSKD 367
LSMKLA VNPR+D N++ LL+ D
Sbjct: 235 ILSMKLAAVNPRIDFNLDRLLAAD 258
>gi|356498448|ref|XP_003518064.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 354
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 139/280 (49%), Gaps = 47/280 (16%)
Query: 144 NLPIPAADPGFAERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNADSKEGS 203
NL P+ + +RAAR S FAG N NS V R PE+++N S G
Sbjct: 84 NLTFPS-NAALIDRAARFSVFAGQSSNSNSP---------EVKRE-LPETDSNPSSTHGG 132
Query: 204 SLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDS 263
++ V + N + T + + + + + DE D
Sbjct: 133 GGGGSVSDLAVENQNLK------------TAKRKEREKKVKASSKKSKSVAAADEISGDG 180
Query: 264 SKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 323
K Y+HVR RRGQATDSHSLAER RREKI+ RMK LQ+LVPGCNK++G
Sbjct: 181 EKLP-----------YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISG 229
Query: 324 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGD 383
A++LD+IIN+VQSLQ +VE LSMKLA VNP +D N+++LL+ + + P D
Sbjct: 230 TALVLDKIINHVQSLQNEVEILSMKLAAVNPVIDFNLDSLLATE----------GVTPMD 279
Query: 384 CSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSL 423
C+ FP P + +G + + +AL+ L
Sbjct: 280 CN---FPPTVAPVMWPEIPQNGNRQQYQQPWPFDALHQPL 316
>gi|51969310|dbj|BAD43347.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|51970180|dbj|BAD43782.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
Length = 327
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 69/127 (54%), Positives = 91/127 (71%), Gaps = 14/127 (11%)
Query: 279 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 338
Y+HVRARRGQATD+HSLAER RREKI+ RMK LQ+LVPGC+K+ G ++LDEIIN+VQ+L
Sbjct: 182 YVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTGLVLDEIINHVQTL 241
Query: 339 QRQVEFLSMKLATVNPRMDLNMEALLSKD-------LFQSCGYVQHSLYPGDCSVQTFPS 391
QRQVE LSM+LA VNPR+D N++++L+ + F + Y Q +P F
Sbjct: 242 QRQVEMLSMRLAAVNPRIDFNLDSILASENGSLMDGSFNAESYHQLQQWP-------FDG 294
Query: 392 RYQPQQG 398
+QP+ G
Sbjct: 295 YHQPEWG 301
>gi|224101643|ref|XP_002312365.1| predicted protein [Populus trichocarpa]
gi|222852185|gb|EEE89732.1| predicted protein [Populus trichocarpa]
Length = 168
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 115/178 (64%), Gaps = 14/178 (7%)
Query: 308 MKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKD 367
MKFLQDLVPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR+DLN+E LL+KD
Sbjct: 1 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIEGLLAKD 60
Query: 368 LFQSCGYVQHSLYPGDCSVQT-FPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRN 426
+ Q H++ P + P Y P SH + +G+ A +N + + R
Sbjct: 61 ILQ-----LHAVPPSSLAFSLEMPMAYPP---SHPSQAGLIPTAFP--GMNNHSDIICRT 110
Query: 427 HNIQLPPINGHGEVGPRVPSLWDDDLQSLVQMGFNQNQP---RSLNGSMATTQMKIEM 481
N QL P+ + ++P++WDD+L+++VQM + + P + +N + +K+E+
Sbjct: 111 INSQLTPMTAGFKEPAQLPNVWDDELRNVVQMSYETSAPHDSQDVNKPLPPGHLKVEL 168
>gi|449520908|ref|XP_004167474.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/106 (66%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Query: 260 KSDSSKTKDNSKPVEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC 318
K DS K K S+ V+ PK+ YIHV+ARRG+A ++HSLAERVRREKISERMK LQ LVPGC
Sbjct: 182 KPDSKKAKGGSQNVQAPKENYIHVQARRGRAANNHSLAERVRREKISERMKLLQQLVPGC 241
Query: 319 NKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALL 364
+++TGK V+LDEIINYVQSLQ+QVE LSMKLA+V L E +L
Sbjct: 242 HQITGKTVVLDEIINYVQSLQQQVELLSMKLASVGLESSLEAEQIL 287
>gi|295913280|gb|ADG57897.1| transcription factor [Lycoris longituba]
Length = 176
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/98 (67%), Positives = 86/98 (87%), Gaps = 5/98 (5%)
Query: 279 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 338
Y+HVRARRGQATDSHSLAER RREKI+ RMK LQ+LVPGC+K++G A++LDEIIN+VQSL
Sbjct: 4 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKISGTALVLDEIINHVQSL 63
Query: 339 QRQVEFLSMKLATVNPRMDLN-MEALLSKDLFQSCGYV 375
QR+VEFLSM+LA VNPR+D + ++++LS + CG++
Sbjct: 64 QREVEFLSMRLAAVNPRIDFSGLDSILSSE----CGHL 97
>gi|357130181|ref|XP_003566729.1| PREDICTED: uncharacterized protein LOC100831834 [Brachypodium
distachyon]
Length = 298
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/83 (80%), Positives = 74/83 (89%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
E P YIHVRA+RGQA DSHSLAERVRREKISE+M LQ LVPGC+KVTGKA+MLDEII+
Sbjct: 149 EAPAGYIHVRAKRGQARDSHSLAERVRREKISEKMLLLQSLVPGCDKVTGKAMMLDEIIS 208
Query: 334 YVQSLQRQVEFLSMKLATVNPRM 356
YVQSLQ QVEFLSMKLA++NP M
Sbjct: 209 YVQSLQNQVEFLSMKLASLNPMM 231
>gi|413956455|gb|AFW89104.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 239
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/85 (76%), Positives = 76/85 (89%)
Query: 277 KDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQ 336
+DY HVRA+RGQAT+SHSLAER RREKI+ RMK LQDLVPGCNK+TGKA+MLDEIINYVQ
Sbjct: 149 EDYAHVRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINYVQ 208
Query: 337 SLQRQVEFLSMKLATVNPRMDLNME 361
SLQRQVEFLSMKL+ + P + ++E
Sbjct: 209 SLQRQVEFLSMKLSAIRPGFNRDLE 233
>gi|413954820|gb|AFW87469.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 359
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/108 (61%), Positives = 87/108 (80%), Gaps = 6/108 (5%)
Query: 268 DNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVM 327
D+ KP Y+HVRARRGQATDSHSLAER RREKI+ RM+ L++LVPGC+KV+G A++
Sbjct: 171 DDEKPA-----YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALV 225
Query: 328 LDEIINYVQSLQRQVEFLSMKLATVNPRMDL-NMEALLSKDLFQSCGY 374
LDEIIN+VQSLQRQVE+LSM+LA VNPR+D +++ L+ + + G+
Sbjct: 226 LDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGGLDSFLTTECGRIAGF 273
>gi|413956454|gb|AFW89103.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 263
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 65/85 (76%), Positives = 76/85 (89%)
Query: 277 KDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQ 336
+DY HVRA+RGQAT+SHSLAER RREKI+ RMK LQDLVPGCNK+TGKA+MLDEIINYVQ
Sbjct: 149 EDYAHVRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINYVQ 208
Query: 337 SLQRQVEFLSMKLATVNPRMDLNME 361
SLQRQVEFLSMKL+ + P + ++E
Sbjct: 209 SLQRQVEFLSMKLSAIRPGFNRDLE 233
>gi|357440189|ref|XP_003590372.1| Transcription factor BEE [Medicago truncatula]
gi|355479420|gb|AES60623.1| Transcription factor BEE [Medicago truncatula]
Length = 326
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/226 (39%), Positives = 127/226 (56%), Gaps = 43/226 (19%)
Query: 142 SNNLPIPAADPGFAERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNADSKE 201
+ NL P+ + ERAAR S FAG ++++S L + PE ++E
Sbjct: 63 TGNLTFPS-NAALVERAARFSVFAGE--------NSTNSPNLPQVKDELPE------TEE 107
Query: 202 GSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKS 261
G +S+ TV ++N + K +R K + + A DEN
Sbjct: 108 GGCVSD----PTVENTNFKSAKRKEREKKVKLSSKKSKSIAA-------------DENSG 150
Query: 262 DSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKV 321
+ + Y+HVR RRGQATDSHSLAER RREKI+ RMK LQ+LVPGCNK+
Sbjct: 151 NGEELP-----------YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKI 199
Query: 322 TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKD 367
+G A++LD+IIN+VQSLQ +VE LSMKLA VNP +D N++++L+ +
Sbjct: 200 SGTALVLDKIINHVQSLQHEVEILSMKLAAVNPIIDFNLDSILAAE 245
>gi|294462391|gb|ADE76744.1| unknown [Picea sitchensis]
Length = 222
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 101/145 (69%), Gaps = 7/145 (4%)
Query: 221 KRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPP---- 276
++ S+++ + + + ++ ++SN K D + +SS+ NS EP
Sbjct: 50 QKGSVKKSRGDRHKSSQSSSIYNDHEQNSNP---KSDVIRGESSELLTNSVKDEPKNKSQ 106
Query: 277 KDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQ 336
KDYIH+R+RRGQAT+SHSLAERVRREKISERMK LQDLVPGCNKVTGKA++L+ IINYVQ
Sbjct: 107 KDYIHLRSRRGQATNSHSLAERVRREKISERMKVLQDLVPGCNKVTGKALVLENIINYVQ 166
Query: 337 SLQRQVEFLSMKLATVNPRMDLNME 361
SLQ QVE LS+KL +V R +++
Sbjct: 167 SLQSQVEILSVKLTSVLSRCHFDLQ 191
>gi|357117653|ref|XP_003560578.1| PREDICTED: transcription factor bHLH48-like [Brachypodium
distachyon]
Length = 259
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/126 (54%), Positives = 93/126 (73%), Gaps = 7/126 (5%)
Query: 251 SMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKF 310
+ + K D +SK + +P Y+HVRARRGQATDSHSLAER RREKI+ RM+
Sbjct: 51 AAKRKADHAADRASKDAGGGEDEKPA--YVHVRARRGQATDSHSLAERARREKINARMEL 108
Query: 311 LQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDL-NMEALLSKDLF 369
L++LVPGC+KV+G A++LDEIIN+VQSLQRQVE+LSM+LA VNPR+D +++ L+ +
Sbjct: 109 LKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGGLDSFLTSE-- 166
Query: 370 QSCGYV 375
CG +
Sbjct: 167 --CGRI 170
>gi|4567302|gb|AAD23713.1| unknown protein [Arabidopsis thaliana]
Length = 226
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 82/98 (83%), Gaps = 8/98 (8%)
Query: 279 YIHVRARRGQATDSHSLAERV--------RREKISERMKFLQDLVPGCNKVTGKAVMLDE 330
Y+HVRARRGQATD+HSLAERV RREKI+ RMK LQ+LVPGC+K+ G A++LDE
Sbjct: 126 YVHVRARRGQATDNHSLAERVIHNLTDMARREKINARMKLLQELVPGCDKIQGTALVLDE 185
Query: 331 IINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
IIN+VQ+LQRQVE LSM+LA VNPR+D N++++L+ ++
Sbjct: 186 IINHVQTLQRQVEMLSMRLAAVNPRIDFNLDSILASEV 223
>gi|413943655|gb|AFW76304.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 370
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 83/98 (84%), Gaps = 5/98 (5%)
Query: 279 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 338
Y+HVRARRGQATDSHSLAER RREKI+ RM+ L++LVPGC+KV+G A++LDEIIN+VQSL
Sbjct: 154 YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSL 213
Query: 339 QRQVEFLSMKLATVNPRMDL-NMEALLSKDLFQSCGYV 375
QRQVE+LSM+LATVNPR D +++ L+ + CG +
Sbjct: 214 QRQVEYLSMRLATVNPRGDFGGLDSFLTTE----CGRI 247
>gi|218198545|gb|EEC80972.1| hypothetical protein OsI_23697 [Oryza sativa Indica Group]
Length = 286
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/97 (67%), Positives = 79/97 (81%), Gaps = 3/97 (3%)
Query: 279 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 338
Y+HVRARRGQATDSHSLAER RREKI+ RM+ L++LVPGC+KV+G A++LDEIIN+VQSL
Sbjct: 104 YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSL 163
Query: 339 QRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYV 375
QRQVE+LSM+LA VNPR+D L L CG +
Sbjct: 164 QRQVEYLSMRLAAVNPRVDFGG---LDNFLTTECGRI 197
>gi|255582765|ref|XP_002532159.1| DNA binding protein, putative [Ricinus communis]
gi|223528169|gb|EEF30233.1| DNA binding protein, putative [Ricinus communis]
Length = 190
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/123 (58%), Positives = 84/123 (68%), Gaps = 10/123 (8%)
Query: 239 PKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAER 298
P+V +NS R K+ ++K D E PK+ +HVRARRGQATDSHSLAER
Sbjct: 40 PQVSENGKGKNNSRRGKRTKSKEDD----------EKPKEVVHVRARRGQATDSHSLAER 89
Query: 299 VRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDL 358
VRR KI+ER++ LQD+VPGC K G AVMLDEIINYVQSLQ QVEFLSMKL + D
Sbjct: 90 VRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASTFYDF 149
Query: 359 NME 361
N E
Sbjct: 150 NSE 152
>gi|147818198|emb|CAN60403.1| hypothetical protein VITISV_034133 [Vitis vinifera]
Length = 484
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 110/292 (37%), Positives = 149/292 (51%), Gaps = 77/292 (26%)
Query: 190 TPESNNNADSKEGSSLSEQITSQTVTDSNP--RKRKSIQRPK--------AKETPPTSDP 239
T +S N A S+EG QI+ D++P ++RKS P+ A P P
Sbjct: 159 TEKSLNGAQSQEG----HQISEGDAVDASPSGKRRKSSFDPRPPLNTSKSADGEQPKGLP 214
Query: 240 KVVAENPEDSNSMRSKQDEN-------KSDSSKTKDNSKPVEPPKD-YIHVRARRGQATD 291
+E ++ + K D+N K + KDNS E PK+ YIHVRARRGQAT+
Sbjct: 215 WENSEFSKEQEEKKQKIDQNMSPNLRGKQPNKHAKDNSSNGEAPKENYIHVRARRGQATN 274
Query: 292 SHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAT 351
SHSLAER+ TGKAVMLDEIINYVQSLQ+QVEFLSMKLAT
Sbjct: 275 SHSLAERI----------------------TGKAVMLDEIINYVQSLQQQVEFLSMKLAT 312
Query: 352 VNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAE 411
VNP +++++E LLSKD+ S G G SV F G ++SS +
Sbjct: 313 VNPELNIDIERLLSKDILNSRG--------GSTSVLGF--------GPGMSSSHPYPHGI 356
Query: 412 NQFSINALNSSLHRNHNIQLPPINGHGEVGPRVPSLWDDDLQSLVQMGFNQN 463
+Q ++ + + + H+ Q ++WD +LQSL+QMGF+ N
Sbjct: 357 SQGTLPGIPTP--QFHSTQ---------------AVWDGELQSLLQMGFDSN 391
>gi|222635879|gb|EEE66011.1| hypothetical protein OsJ_21966 [Oryza sativa Japonica Group]
Length = 325
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/97 (67%), Positives = 79/97 (81%), Gaps = 3/97 (3%)
Query: 279 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 338
Y+HVRARRGQATDSHSLAER RREKI+ RM+ L++LVPGC+KV+G A++LDEIIN+VQSL
Sbjct: 143 YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSL 202
Query: 339 QRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYV 375
QRQVE+LSM+LA VNPR+D L L CG +
Sbjct: 203 QRQVEYLSMRLAAVNPRVDFGG---LDNFLTTECGRI 236
>gi|224066981|ref|XP_002302310.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
gi|222844036|gb|EEE81583.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
Length = 309
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/77 (87%), Positives = 70/77 (90%), Gaps = 3/77 (3%)
Query: 267 KDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAV 326
K NSKP P+DYIHVRAR+GQATDSHSL ERVRREKISERMK LQ+LVPGCNKVTGKA
Sbjct: 120 KANSKP---PEDYIHVRARKGQATDSHSLVERVRREKISERMKLLQNLVPGCNKVTGKAF 176
Query: 327 MLDEIINYVQSLQRQVE 343
MLDEIINYVQSLQRQVE
Sbjct: 177 MLDEIINYVQSLQRQVE 193
>gi|11761480|gb|AAG28811.2|AC079374_14 helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
Length = 166
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/102 (64%), Positives = 78/102 (76%)
Query: 269 NSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVML 328
N + PKD +HVRA+RGQATDSHSLAERVRREKI+ER+K LQDLVPGC K G AVML
Sbjct: 34 NGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVML 93
Query: 329 DEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQ 370
D II+YV+SLQ Q+EFLSMKL+ + DLN + D+FQ
Sbjct: 94 DVIIDYVRSLQNQIEFLSMKLSAASACYDLNSLDIEPTDIFQ 135
>gi|224118802|ref|XP_002317910.1| predicted protein [Populus trichocarpa]
gi|222858583|gb|EEE96130.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/86 (74%), Positives = 70/86 (81%)
Query: 276 PKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYV 335
PKD +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G AVMLDEIINYV
Sbjct: 150 PKDVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYV 209
Query: 336 QSLQRQVEFLSMKLATVNPRMDLNME 361
QSLQ QVEFLSMKL + D N E
Sbjct: 210 QSLQNQVEFLSMKLTAASTFYDFNAE 235
>gi|18395643|ref|NP_564229.1| transcription factor bHLH75 [Arabidopsis thaliana]
gi|218563498|sp|A4D998.1|BH075_ARATH RecName: Full=Transcription factor bHLH75; AltName: Full=Basic
helix-loop-helix protein 75; Short=AtbHLH75; Short=bHLH
75; AltName: Full=Transcription factor EN 78; AltName:
Full=bHLH transcription factor bHLH075
gi|21618141|gb|AAM67191.1| helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
gi|51969656|dbj|BAD43520.1| putative bHLH transcription factor (bHLH075) [Arabidopsis thaliana]
gi|91805851|gb|ABE65654.1| basic helix-loop-helix family protein [Arabidopsis thaliana]
gi|332192486|gb|AEE30607.1| transcription factor bHLH75 [Arabidopsis thaliana]
Length = 223
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/102 (64%), Positives = 78/102 (76%)
Query: 269 NSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVML 328
N + PKD +HVRA+RGQATDSHSLAERVRREKI+ER+K LQDLVPGC K G AVML
Sbjct: 91 NGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVML 150
Query: 329 DEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQ 370
D II+YV+SLQ Q+EFLSMKL+ + DLN + D+FQ
Sbjct: 151 DVIIDYVRSLQNQIEFLSMKLSAASACYDLNSLDIEPTDIFQ 192
>gi|116830915|gb|ABK28414.1| unknown [Arabidopsis thaliana]
Length = 224
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/102 (64%), Positives = 78/102 (76%)
Query: 269 NSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVML 328
N + PKD +HVRA+RGQATDSHSLAERVRREKI+ER+K LQDLVPGC K G AVML
Sbjct: 91 NGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVML 150
Query: 329 DEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQ 370
D II+YV+SLQ Q+EFLSMKL+ + DLN + D+FQ
Sbjct: 151 DVIIDYVRSLQNQIEFLSMKLSAASACYDLNSLDIEPTDIFQ 192
>gi|225425220|ref|XP_002267465.1| PREDICTED: transcription factor bHLH76-like [Vitis vinifera]
Length = 270
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/96 (67%), Positives = 77/96 (80%), Gaps = 1/96 (1%)
Query: 276 PKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYV 335
P ++HVRARRG+ATDSHSLAER RREKISERMKFLQ LVPGC+K+ GK ++LDEIINYV
Sbjct: 102 PSGFVHVRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYV 161
Query: 336 QSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQS 371
+SLQ QVEFL KLA+++P M + EA L QS
Sbjct: 162 KSLQNQVEFLVGKLASISP-MLIGHEANLDSSTLQS 196
>gi|449439405|ref|XP_004137476.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449531561|ref|XP_004172754.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 278
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 97/147 (65%), Gaps = 6/147 (4%)
Query: 216 DSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEP 275
D + K++ ++ A E+ + V+EN + +K + K SK K ++ E
Sbjct: 93 DLHGSKKRKLENNDAYESSSGNSTPQVSEN-----GINTKNNNGKEKRSK-KGDTNDGEK 146
Query: 276 PKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYV 335
P++ +HVRARRGQATDSHS+AER+RR KI+ER++ LQD+VPGC K G AVMLDEIINYV
Sbjct: 147 PREVVHVRARRGQATDSHSVAERIRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYV 206
Query: 336 QSLQRQVEFLSMKLATVNPRMDLNMEA 362
QSLQ QVEFLSMKL + D N ++
Sbjct: 207 QSLQNQVEFLSMKLTAASSYHDFNSDS 233
>gi|168050670|ref|XP_001777781.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670882|gb|EDQ57443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 67
Score = 135 bits (339), Expect = 6e-29, Method: Composition-based stats.
Identities = 63/67 (94%), Positives = 65/67 (97%)
Query: 277 KDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQ 336
+DYIHVRARRGQATDSHSLAERVRREKISERMK+LQDLVPGC KVTGKAVMLDEIINYVQ
Sbjct: 1 QDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCKKVTGKAVMLDEIINYVQ 60
Query: 337 SLQRQVE 343
LQRQVE
Sbjct: 61 FLQRQVE 67
>gi|225424017|ref|XP_002279412.1| PREDICTED: transcription factor bHLH75 [Vitis vinifera]
Length = 258
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 87/127 (68%), Gaps = 12/127 (9%)
Query: 233 TPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDS 292
+PP S + + +N R + +E ++N+KP ++ IHVRA+RGQATDS
Sbjct: 103 SPPASGSEFLGDNKNLGGRKRKRSNE--------RENNKP----REVIHVRAKRGQATDS 150
Query: 293 HSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATV 352
HSLAERVRREKI+E+++ LQDLVPGC K G AVMLD IINYVQSLQ Q+EFLSMKL+
Sbjct: 151 HSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQIEFLSMKLSAA 210
Query: 353 NPRMDLN 359
+ D N
Sbjct: 211 STFYDFN 217
>gi|297737801|emb|CBI27002.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 87/127 (68%), Gaps = 12/127 (9%)
Query: 233 TPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDS 292
+PP S + + +N R + +E ++N+KP ++ IHVRA+RGQATDS
Sbjct: 86 SPPASGSEFLGDNKNLGGRKRKRSNE--------RENNKP----REVIHVRAKRGQATDS 133
Query: 293 HSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATV 352
HSLAERVRREKI+E+++ LQDLVPGC K G AVMLD IINYVQSLQ Q+EFLSMKL+
Sbjct: 134 HSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQIEFLSMKLSAA 193
Query: 353 NPRMDLN 359
+ D N
Sbjct: 194 STFYDFN 200
>gi|224135389|ref|XP_002322061.1| predicted protein [Populus trichocarpa]
gi|222869057|gb|EEF06188.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 66/108 (61%), Positives = 79/108 (73%)
Query: 254 SKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQD 313
SK+ ++ + K N + E ++ +HVRARRGQATDSHSLAERVRR KI+ER++ LQD
Sbjct: 129 SKKRKSSRRGKRVKSNEEEEEKTREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQD 188
Query: 314 LVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNME 361
+VPGC K G AVMLDEIINYVQSLQ QVEFLSMKL + D N E
Sbjct: 189 IVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNAE 236
>gi|147773703|emb|CAN76460.1| hypothetical protein VITISV_010828 [Vitis vinifera]
Length = 237
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 87/127 (68%), Gaps = 12/127 (9%)
Query: 233 TPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDS 292
+PP S + + +N R + +E ++N+KP ++ IHVRA+RGQATDS
Sbjct: 82 SPPASGSEFLGDNKNLGGRKRKRSNE--------RENNKP----REVIHVRAKRGQATDS 129
Query: 293 HSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATV 352
HSLAERVRREKI+E+++ LQDLVPGC K G AVMLD IINYVQSLQ Q+EFLSMKL+
Sbjct: 130 HSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQIEFLSMKLSAA 189
Query: 353 NPRMDLN 359
+ D N
Sbjct: 190 STFYDFN 196
>gi|296088166|emb|CBI35658.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 65/96 (67%), Positives = 77/96 (80%), Gaps = 1/96 (1%)
Query: 276 PKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYV 335
P ++HVRARRG+ATDSHSLAER RREKISERMKFLQ LVPGC+K+ GK ++LDEIINYV
Sbjct: 36 PSGFVHVRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYV 95
Query: 336 QSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQS 371
+SLQ QVEFL KLA+++P M + EA L QS
Sbjct: 96 KSLQNQVEFLVGKLASISP-MLIGHEANLDSSTLQS 130
>gi|225455954|ref|XP_002276500.1| PREDICTED: transcription factor BEE 3 [Vitis vinifera]
gi|297734215|emb|CBI15462.3| unnamed protein product [Vitis vinifera]
Length = 265
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 68/107 (63%), Positives = 78/107 (72%), Gaps = 2/107 (1%)
Query: 255 KQDENKSDSSK--TKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQ 312
K+ +N S K K K E P++ +HVRARRGQATDSHSLAERVRR KI+ER++ LQ
Sbjct: 118 KRGKNSSGRGKRAMKSIEKEDEKPREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQ 177
Query: 313 DLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLN 359
D+VPGC K G AVMLDEIINYVQSLQ QVEFLSMKL + D N
Sbjct: 178 DIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASQYYDFN 224
>gi|297839255|ref|XP_002887509.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
gi|297333350|gb|EFH63768.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/104 (65%), Positives = 77/104 (74%), Gaps = 2/104 (1%)
Query: 260 KSDSSKTKDNSKPVEPPKD--YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPG 317
K++SS+ SK E KD +HVRARRGQATDSHS+AERVRR KI+ER+K LQD+VPG
Sbjct: 125 KNNSSRRGKRSKNREEEKDREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPG 184
Query: 318 CNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNME 361
C K G A MLDEIINYVQSLQ QVEFLSMKL + D N E
Sbjct: 185 CYKTMGMATMLDEIINYVQSLQNQVEFLSMKLTAASSYYDFNSE 228
>gi|295913282|gb|ADG57898.1| transcription factor [Lycoris longituba]
Length = 206
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/103 (64%), Positives = 84/103 (81%), Gaps = 7/103 (6%)
Query: 279 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNK--VTGKAVMLDEIINYVQ 336
Y+HVRARRGQATDSHSLAER RREKI+ RMK LQ+LVPGC+K ++G A++LD+IIN+VQ
Sbjct: 29 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKGQISGTALVLDKIINHVQ 88
Query: 337 SLQRQVEFLSMKLATVNPRMDLN-MEALLSKDLFQSCGYVQHS 378
SLQRQVEFLSM+LA V PR+D + ++ +LS + CG + S
Sbjct: 89 SLQRQVEFLSMRLAAVTPRIDFSGLDNILSSE----CGRLTSS 127
>gi|449439537|ref|XP_004137542.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449532109|ref|XP_004173026.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 265
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/142 (52%), Positives = 92/142 (64%), Gaps = 7/142 (4%)
Query: 221 KRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYI 280
KRKS+ ++ T S P+V E + + + K S K+ K ++ +
Sbjct: 94 KRKSMPMDVSESTSGISTPQV----SESGFNTKYSSGKGKRLKSLEKEEEKST---REVV 146
Query: 281 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 340
HVRARRGQATDSHSLAERVRR KI+ER++ L+D+VPGC K G AVMLDEIINYVQSLQ
Sbjct: 147 HVRARRGQATDSHSLAERVRRGKINERLRCLKDIVPGCYKTMGMAVMLDEIINYVQSLQN 206
Query: 341 QVEFLSMKLATVNPRMDLNMEA 362
QVEFLSMKLA + D N EA
Sbjct: 207 QVEFLSMKLAAASSFYDFNSEA 228
>gi|147802826|emb|CAN64154.1| hypothetical protein VITISV_000192 [Vitis vinifera]
Length = 270
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/96 (66%), Positives = 77/96 (80%), Gaps = 1/96 (1%)
Query: 276 PKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYV 335
P ++HVRARRG+ATDSHSLAER RREKISERMK LQ LVPGC+K+ GK ++LDEIINYV
Sbjct: 102 PSGFVHVRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKIIGKTLVLDEIINYV 161
Query: 336 QSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQS 371
+SLQ QVEFL KLA+++P M + EA L + QS
Sbjct: 162 KSLQNQVEFLVGKLASISP-MLIGHEANLDSNTLQS 196
>gi|356529573|ref|XP_003533364.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 273
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/145 (50%), Positives = 89/145 (61%), Gaps = 16/145 (11%)
Query: 220 RKRKSIQRPK---AKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPP 276
+KRKS+ P+ A TP S+ SK + + K N E
Sbjct: 104 KKRKSVDLPETSSANSTPAVSESG-------------SKIKHSSGRGKRVKSNVTEEEKA 150
Query: 277 KDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQ 336
K+ +HVRARRGQATDSHSLAERVRR KI+E+++ LQ++VPGC K G AVMLDEIINYVQ
Sbjct: 151 KEVVHVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQ 210
Query: 337 SLQRQVEFLSMKLATVNPRMDLNME 361
SLQ QVEFLS+KL + D N E
Sbjct: 211 SLQHQVEFLSLKLTAASTFYDFNSE 235
>gi|414591362|tpg|DAA41933.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 384
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 109/271 (40%), Positives = 130/271 (47%), Gaps = 62/271 (22%)
Query: 118 CYSTPLNSPPLPKLNLSMIRGSKSSNNLPIPAADPGFAERAARLSCFAGSQMNMNSSVSA 177
C+ TP SP SKS+ + A D AERA L CF S + S V +
Sbjct: 127 CHGTPAGSP------------SKSAAPW-VLAGDAAPAERATGLPCFPASCGEL-SRVPS 172
Query: 178 SDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTS 237
S L + + +K+ +S + +D RKRK+ KAK+ T+
Sbjct: 173 CQSSLLGEHAPTPAPAPLPGAAKQHAS------DGSCSDGPCRKRKA-SGGKAKDVVTTA 225
Query: 238 DPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVE----------PPKDYIHVRARRG 287
PK + PE R + D + + N K E PPKDYIHVRARRG
Sbjct: 226 TPK--SREPETMAKRRKLSTDAARDEAGSHGNGKGKEVAPAAEPEPQPPKDYIHVRARRG 283
Query: 288 QATDSHSLAERVRREKISERMKFLQDLVPGCN---------------------------- 319
QATDSHSLAERVRREKISERMK LQDLVPGC+
Sbjct: 284 QATDSHSLAERVRREKISERMKLLQDLVPGCSKVSKHRRPLLKIRLKTHAYFNFQRLLDL 343
Query: 320 -KVTGKAVMLDEIINYVQSLQRQVEFLSMKL 349
KVTGKAVMLDEIINYVQSLQ QVE + L
Sbjct: 344 VKVTGKAVMLDEIINYVQSLQCQVEVRAYDL 374
>gi|390979908|gb|AFM30926.1| basic helix-loop-helix, partial [Vitis vinifera]
Length = 270
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/96 (66%), Positives = 76/96 (79%), Gaps = 1/96 (1%)
Query: 276 PKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYV 335
P ++HVRARRG+ATDSHSLAER RREKISERMK LQ LVPGC+K+ GK ++LDEIINYV
Sbjct: 102 PSGFVHVRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKLIGKTLVLDEIINYV 161
Query: 336 QSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQS 371
+SLQ QVEFL KLA+++P M + EA L QS
Sbjct: 162 KSLQNQVEFLVGKLASISP-MLIGHEANLDSSTLQS 196
>gi|356520601|ref|XP_003528950.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 272
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/145 (50%), Positives = 89/145 (61%), Gaps = 16/145 (11%)
Query: 220 RKRKSIQRPK---AKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPP 276
+KRKS+ P+ A TP S+ SK + + K N E
Sbjct: 103 KKRKSMDLPETSSANSTPAVSESG-------------SKIKHSSGRGKRVKSNVTEEEKA 149
Query: 277 KDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQ 336
K+ +HVRARRGQATDSHSLAERVRR KI+E+++ LQ++VPGC K G AVMLDEIINYVQ
Sbjct: 150 KEVVHVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQ 209
Query: 337 SLQRQVEFLSMKLATVNPRMDLNME 361
SLQ QVEFLS+KL + D N E
Sbjct: 210 SLQHQVEFLSLKLTAASTFYDFNSE 234
>gi|224127674|ref|XP_002329336.1| predicted protein [Populus trichocarpa]
gi|222870790|gb|EEF07921.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 108/180 (60%), Gaps = 23/180 (12%)
Query: 191 PESNNNADSKEGSS------LSEQITSQTVT----DSN-PRKRKSIQRPKAKETPPTSDP 239
PE D K SS LS TVT DS+ +KRKS+++ + PT+
Sbjct: 58 PEFTATYDHKNLSSTFHPDILSTATVVHTVTLNQNDSHDSKKRKSMEQSTSSYISPTAST 117
Query: 240 KVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERV 299
E + +N SK+ ENK K + ++ IHVRA+RGQATDSHS+AERV
Sbjct: 118 N---ETKKKNNLGGSKKGENKE---------KEGDKAEEVIHVRAKRGQATDSHSIAERV 165
Query: 300 RREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLN 359
RREKI+ +++ LQDLVPGC++ G AVML+EIINYV SLQ QVEFLSM+LA + DLN
Sbjct: 166 RREKINNKLRCLQDLVPGCHRSMGMAVMLEEIINYVHSLQNQVEFLSMELAAASSSNDLN 225
>gi|238005608|gb|ACR33839.1| unknown [Zea mays]
gi|413938469|gb|AFW73020.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 246
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/66 (89%), Positives = 65/66 (98%)
Query: 278 DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQS 337
DYIHVRARRGQATDSHSLAERVRRE+ISERM++LQ+LVPGC+KVTGKA MLDEIINYVQS
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 338 LQRQVE 343
LQ+QVE
Sbjct: 202 LQKQVE 207
>gi|356527821|ref|XP_003532505.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 252
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/109 (58%), Positives = 79/109 (72%)
Query: 254 SKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQD 313
SK + + K NS + P + +HVRA+RGQATDSHSLAERVRR KI+E+++ LQ+
Sbjct: 105 SKTKNSSGRGKRVKRNSIEDKKPNEVVHVRAKRGQATDSHSLAERVRRGKINEKLRCLQN 164
Query: 314 LVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEA 362
+VPGC K G A+MLDEIINYVQSLQ QVEFLSMKL + DLN E+
Sbjct: 165 IVPGCYKTMGMAIMLDEIINYVQSLQHQVEFLSMKLTAASTYYDLNSES 213
>gi|255586626|ref|XP_002533944.1| DNA binding protein, putative [Ricinus communis]
gi|223526075|gb|EEF28430.1| DNA binding protein, putative [Ricinus communis]
Length = 267
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 102/157 (64%), Gaps = 9/157 (5%)
Query: 210 TSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDN 269
+SQ V + +KRK E TS K V+ P S + +KQ N K K+
Sbjct: 86 SSQYVIFRDSKKRKV-------EAQSTSSSKNVS--PTTSTTTNTKQKNNLGRDKKGKNK 136
Query: 270 SKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLD 329
K VE ++ IHVRA+RGQATDSHS+AERVRREKI+ +++ LQDLVPGC+K G AVML+
Sbjct: 137 EKEVEKAEEVIHVRAKRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHKSMGMAVMLE 196
Query: 330 EIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSK 366
EIINYV SLQ QVEFLSM+LA + DLN+E SK
Sbjct: 197 EIINYVHSLQNQVEFLSMELAAASCSYDLNLETESSK 233
>gi|30685840|ref|NP_173276.2| transcription factor BEE 1 [Arabidopsis thaliana]
gi|75299631|sp|Q8GZ13.1|BEE1_ARATH RecName: Full=Transcription factor BEE 1; AltName: Full=Basic
helix-loop-helix protein 44; Short=AtbHLH44; Short=bHLH
44; AltName: Full=Protein Brassinosteroid enhanced
expression 1; AltName: Full=Transcription factor EN 77;
AltName: Full=bHLH transcription factor bHLH044
gi|26449635|dbj|BAC41942.1| putative bHLH transcription factor bHLH044 [Arabidopsis thaliana]
gi|28950817|gb|AAO63332.1| At1g18400 [Arabidopsis thaliana]
gi|34391437|gb|AAN18283.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332191590|gb|AEE29711.1| transcription factor BEE 1 [Arabidopsis thaliana]
Length = 260
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 66/82 (80%)
Query: 280 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 339
+HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G A MLDEIINYVQSLQ
Sbjct: 143 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 202
Query: 340 RQVEFLSMKLATVNPRMDLNME 361
QVEFLSMKL + D N E
Sbjct: 203 NQVEFLSMKLTAASSFYDFNSE 224
>gi|334183900|ref|NP_001185394.1| transcription factor BEE 3 [Arabidopsis thaliana]
gi|332197393|gb|AEE35514.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 260
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 65/81 (80%)
Query: 281 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 340
HVRARRGQATDSHS+AERVRR KI+ER+K LQD+VPGC K G A MLDEIINYVQSLQ
Sbjct: 146 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 205
Query: 341 QVEFLSMKLATVNPRMDLNME 361
QVEFLSMKL + D N E
Sbjct: 206 QVEFLSMKLTAASSYYDFNSE 226
>gi|30698967|ref|NP_177524.2| transcription factor BEE 3 [Arabidopsis thaliana]
gi|75299562|sp|Q8GWK7.1|BEE3_ARATH RecName: Full=Transcription factor BEE 3; AltName: Full=Basic
helix-loop-helix protein 50; Short=AtbHLH50; Short=bHLH
50; AltName: Full=Protein Brassinosteroid enhanced
expression 3; AltName: Full=Transcription factor EN 76;
AltName: Full=bHLH transcription factor bHLH050
gi|26452579|dbj|BAC43374.1| putative bHLH transcription factor bHLH050 [Arabidopsis thaliana]
gi|29824159|gb|AAP04040.1| putative helix-loop-helix DNA-binding protein [Arabidopsis
thaliana]
gi|332197392|gb|AEE35513.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 261
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 65/81 (80%)
Query: 281 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 340
HVRARRGQATDSHS+AERVRR KI+ER+K LQD+VPGC K G A MLDEIINYVQSLQ
Sbjct: 146 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 205
Query: 341 QVEFLSMKLATVNPRMDLNME 361
QVEFLSMKL + D N E
Sbjct: 206 QVEFLSMKLTAASSYYDFNSE 226
>gi|12324208|gb|AAG52074.1|AC012679_12 putative helix-loop-helix DNA-binding protein; 87971-89290
[Arabidopsis thaliana]
Length = 250
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 65/81 (80%)
Query: 281 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 340
HVRARRGQATDSHS+AERVRR KI+ER+K LQD+VPGC K G A MLDEIINYVQSLQ
Sbjct: 135 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 194
Query: 341 QVEFLSMKLATVNPRMDLNME 361
QVEFLSMKL + D N E
Sbjct: 195 QVEFLSMKLTAASSYYDFNSE 215
>gi|224057820|ref|XP_002299340.1| predicted protein [Populus trichocarpa]
gi|222846598|gb|EEE84145.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 97/165 (58%), Gaps = 17/165 (10%)
Query: 264 SKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 323
+K + + P+E P Y+HVRARRG+ATDSHSLAERVRRE+IS +MK LQ LVPGC+++TG
Sbjct: 59 TKRQKKAPPLEHPTGYVHVRARRGEATDSHSLAERVRRERISAKMKLLQSLVPGCDQITG 118
Query: 324 KAVMLDEIINYVQSLQRQVEFLSMKLATVNP------RMDLNMEALLSKDLFQSCGYVQH 377
KA++LDEII YVQSL+ ++ L +L VN +++ NME ++LF S +
Sbjct: 119 KALILDEIIRYVQSLKDRIGSLEAELVLVNEMVINDFKVNYNMETQAWQELFSSELQLPS 178
Query: 378 SLYPGDCSVQTF-------PSRYQPQQGSHLTSSGINNNAENQFS 415
L G + F S QP HLT E FS
Sbjct: 179 DLESGSSQLSPFVGTSDAPTSVLQP----HLTKPATLKGHERLFS 219
>gi|6714300|gb|AAF25996.1|AC013354_15 F15H18.11 [Arabidopsis thaliana]
Length = 1154
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 66/82 (80%)
Query: 280 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 339
+HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G A MLDEIINYVQSLQ
Sbjct: 1037 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 1096
Query: 340 RQVEFLSMKLATVNPRMDLNME 361
QVEFLSMKL + D N E
Sbjct: 1097 NQVEFLSMKLTAASSFYDFNSE 1118
>gi|414886198|tpg|DAA62212.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 172
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 105/182 (57%), Gaps = 18/182 (9%)
Query: 308 MKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDL-NMEALLSK 366
MKFLQDLVPGCNKV GKA+MLDEIINYVQSLQ+QVEFLSMKLATVNP++D N+ LL K
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHK 60
Query: 367 DLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNA-ENQFSINALNSSLHR 425
D++Q CG +S++P + FP Q S G + A E+Q S++ L+++L
Sbjct: 61 DMYQPCGPSANSVFPLESDGAAFPFC---DQADLFHSFGSGSAAMEDQCSLSLLDTALPH 117
Query: 426 NHNIQLPPINGHGEVGPRVPSLWDDDLQSLVQMGFNQNQPR------SLNGSMATTQMKI 479
N Q + W+D LQ+ + G Q Q + +G + Q K+
Sbjct: 118 AANPQFA-------FQKQQRDFWEDGLQNALPTGSEQRQEEDGLLVPNFDGQLHADQTKV 170
Query: 480 EM 481
E
Sbjct: 171 EF 172
>gi|223702430|gb|ACN21646.1| putative basic helix-loop-helix protein BHLH5 [Lotus japonicus]
gi|388495576|gb|AFK35854.1| unknown [Lotus japonicus]
Length = 268
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/82 (71%), Positives = 67/82 (81%)
Query: 280 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 339
+HVRARRGQATDSHSLAERVRR KI+E++K LQ++VPGC K G A+MLDEIINYVQSLQ
Sbjct: 150 VHVRARRGQATDSHSLAERVRRGKINEKLKCLQNIVPGCYKTMGMAIMLDEIINYVQSLQ 209
Query: 340 RQVEFLSMKLATVNPRMDLNME 361
QVEFLSMKL + D N E
Sbjct: 210 HQVEFLSMKLTAASTFYDFNSE 231
>gi|297606176|ref|NP_001058071.2| Os06g0613500 [Oryza sativa Japonica Group]
gi|255677227|dbj|BAF19985.2| Os06g0613500, partial [Oryza sativa Japonica Group]
Length = 178
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 74/92 (80%), Gaps = 3/92 (3%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
ARRGQATDSHSLAER RREKI+ RM+ L++LVPGC+KV+G A++LDEIIN+VQSLQRQVE
Sbjct: 1 ARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVE 60
Query: 344 FLSMKLATVNPRMDLNMEALLSKDLFQSCGYV 375
+LSM+LA VNPR+D L L CG +
Sbjct: 61 YLSMRLAAVNPRVDFGG---LDNFLTTECGRI 89
>gi|218194642|gb|EEC77069.1| hypothetical protein OsI_15464 [Oryza sativa Indica Group]
Length = 403
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 70/95 (73%), Gaps = 17/95 (17%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
EP KDYIHVR RE+ISERMK LQ LVPGCNK+TGKA+MLDEIIN
Sbjct: 196 EPAKDYIHVR-----------------RERISERMKLLQSLVPGCNKITGKALMLDEIIN 238
Query: 334 YVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDL 368
YVQSLQRQVEFLSMKLAT+NP++D + + SKD+
Sbjct: 239 YVQSLQRQVEFLSMKLATMNPQLDFDSHYMPSKDM 273
>gi|356513103|ref|XP_003525253.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 246
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 74/98 (75%)
Query: 265 KTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGK 324
+ K N + P + +HVRA+RGQATDSHSLAERVRR KI+E+++ LQ++VPGC K G
Sbjct: 110 RVKRNMIEDKKPNEVVHVRAKRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGM 169
Query: 325 AVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEA 362
A+MLDEIINYVQSLQ QVEFLSMKL + D N E+
Sbjct: 170 AIMLDEIINYVQSLQHQVEFLSMKLNAASTYYDFNSES 207
>gi|295913621|gb|ADG58055.1| transcription factor [Lycoris longituba]
Length = 207
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 65/78 (83%)
Query: 262 DSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKV 321
D S K + +DYIHVRARRG+ATDSHSLAERVRRE+ISERMK+L+ LVPGCNK+
Sbjct: 130 DDSGNGSKEKNEDKKQDYIHVRARRGEATDSHSLAERVRRERISERMKYLEGLVPGCNKI 189
Query: 322 TGKAVMLDEIINYVQSLQ 339
TGKA MLDEIINYVQSLQ
Sbjct: 190 TGKAGMLDEIINYVQSLQ 207
>gi|224072488|ref|XP_002303756.1| predicted protein [Populus trichocarpa]
gi|222841188|gb|EEE78735.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/77 (72%), Positives = 66/77 (85%)
Query: 267 KDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAV 326
K PVEPP Y+HVRARRG+ATDSHSLAERVRREKIS RMK LQ LVPGC+K+TGKA+
Sbjct: 146 KQKKVPVEPPTGYVHVRARRGEATDSHSLAERVRREKISSRMKLLQSLVPGCDKITGKAL 205
Query: 327 MLDEIINYVQSLQRQVE 343
+LDEII+YVQ L+ +V+
Sbjct: 206 VLDEIISYVQFLKDRVQ 222
>gi|297844782|ref|XP_002890272.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
gi|297336114|gb|EFH66531.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
Length = 1143
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 59/82 (71%), Positives = 66/82 (80%)
Query: 280 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 339
+HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G A MLDEIINYVQSLQ
Sbjct: 1026 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 1085
Query: 340 RQVEFLSMKLATVNPRMDLNME 361
QVEFLSMKL + D + E
Sbjct: 1086 NQVEFLSMKLNAASSFYDFSSE 1107
>gi|414886200|tpg|DAA62214.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 161
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 97/159 (61%), Gaps = 13/159 (8%)
Query: 308 MKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDL-NMEALLSK 366
MKFLQDLVPGCNKV GKA+MLDEIINYVQSLQ+QVEFLSMKLATVNP++D N+ LL K
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHK 60
Query: 367 DLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNA-ENQFSINALNSSLHR 425
D++Q CG +S++P + FP Q S G + A E+Q S++ L+++L
Sbjct: 61 DMYQPCGPSANSVFPLESDGAAFPFC---DQADLFHSFGSGSAAMEDQCSLSLLDTALPH 117
Query: 426 NHNIQLPPINGHGEVGPRVPSLWDDDLQSLVQMGFNQNQ 464
N Q + W+D LQ+ + G Q Q
Sbjct: 118 AANPQF--------AFQKQRDFWEDGLQNALPTGSEQRQ 148
>gi|414886199|tpg|DAA62213.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 162
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 97/159 (61%), Gaps = 12/159 (7%)
Query: 308 MKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDL-NMEALLSK 366
MKFLQDLVPGCNKV GKA+MLDEIINYVQSLQ+QVEFLSMKLATVNP++D N+ LL K
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHK 60
Query: 367 DLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNA-ENQFSINALNSSLHR 425
D++Q CG +S++P + FP Q S G + A E+Q S++ L+++L
Sbjct: 61 DMYQPCGPSANSVFPLESDGAAFPFC---DQADLFHSFGSGSAAMEDQCSLSLLDTALPH 117
Query: 426 NHNIQLPPINGHGEVGPRVPSLWDDDLQSLVQMGFNQNQ 464
N Q + W+D LQ+ + G Q Q
Sbjct: 118 AANPQF-------AFQKQQRDFWEDGLQNALPTGSEQRQ 149
>gi|58743491|gb|AAW81732.1| putative bZIPtranscription factor protein [Brassica oleracea]
Length = 263
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/82 (71%), Positives = 65/82 (79%)
Query: 280 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 339
+HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G A MLDEIINYVQSLQ
Sbjct: 146 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKSMGMATMLDEIINYVQSLQ 205
Query: 340 RQVEFLSMKLATVNPRMDLNME 361
QVE LSMKL + D N E
Sbjct: 206 NQVELLSMKLTAASSFYDFNSE 227
>gi|356554137|ref|XP_003545405.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 305
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 89/142 (62%), Gaps = 10/142 (7%)
Query: 220 RKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDY 279
+KRKS+ P+ S PKV E N + K + K+N E K+
Sbjct: 101 KKRKSMDLPETSSV--NSTPKV----SESGNKFKHSSGRGK----RVKNNVTEEEKAKEV 150
Query: 280 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 339
++VRAR GQATDS +LAERVRR KI+E++++LQ++VPGC K G AVMLDEIINYVQSLQ
Sbjct: 151 VNVRARSGQATDSRNLAERVRRGKINEKLRYLQNIVPGCYKTMGMAVMLDEIINYVQSLQ 210
Query: 340 RQVEFLSMKLATVNPRMDLNME 361
QVEFLS+KL + D N E
Sbjct: 211 NQVEFLSLKLTAPSTFYDFNSE 232
>gi|168061161|ref|XP_001782559.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665966|gb|EDQ52634.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 154
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/98 (68%), Positives = 79/98 (80%), Gaps = 3/98 (3%)
Query: 277 KDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQ 336
+D+I VRARRGQATDS S+AE VR EKI +RMK+LQDLVPGC KVTGK MLDEIINYVQ
Sbjct: 6 QDFIRVRARRGQATDSLSVAEWVRCEKIRKRMKYLQDLVPGCRKVTGKTDMLDEIINYVQ 65
Query: 337 SLQRQVEFLSMKLATVNPR-MD-LNMEALLS-KDLFQS 371
SLQ Q E LSMKL V+P +D L +E+LLS +++ QS
Sbjct: 66 SLQCQAESLSMKLGAVHPAPLDHLTLESLLSIEEVLQS 103
>gi|30695832|ref|NP_567057.2| transcription factor bHLH60 [Arabidopsis thaliana]
gi|122214701|sp|Q3EAI1.1|BH060_ARATH RecName: Full=Transcription factor bHLH60; AltName: Full=Basic
helix-loop-helix protein 60; Short=AtbHLH60; Short=bHLH
60; AltName: Full=Transcription factor EN 91; AltName:
Full=bHLH transcription factor bHLH060
gi|332646181|gb|AEE79702.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 426
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 79/136 (58%), Gaps = 47/136 (34%)
Query: 279 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNK------------------ 320
Y+HVRARRGQATDSHSLAER RREKI+ RMK LQ+LVPGC+K
Sbjct: 201 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGTDFGGKIKIKVCFGVHL 260
Query: 321 -----------------------------VTGKAVMLDEIINYVQSLQRQVEFLSMKLAT 351
+ G A++LDEIIN+VQSLQRQVE LSM+LA
Sbjct: 261 LMISGKKVAIFLWKVSCEDLIDCSFSPPRIQGTALVLDEIINHVQSLQRQVEMLSMRLAA 320
Query: 352 VNPRMDLNMEALLSKD 367
VNPR+D N++ +L+ +
Sbjct: 321 VNPRIDFNLDTILASE 336
>gi|3540186|gb|AAC34336.1| Hypothetical protein [Arabidopsis thaliana]
Length = 339
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 122/227 (53%), Gaps = 37/227 (16%)
Query: 148 PAADPGFA-ERAARLSCFAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLS 206
P + GFA + A L F SD K R+ R+ ++
Sbjct: 81 PGSVSGFAADMPASLLPFGDCGGGQIGHFLGSDKKGERLIRAGESSHEDH---------- 130
Query: 207 EQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDEN-KSDSSK 265
Q++ V ++P ++ + P+A+ + E+P+ N K+ +N +S +
Sbjct: 131 HQVSDDAVLGASPVGKRRL--PEAESQWNKKAVEEFQEDPQRGNDQSQKKHKNDQSKETV 188
Query: 266 TKDNSKPVEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGK 324
K++S+ E PK+ YIH+RARRGQAT+SHSLAER+ TGK
Sbjct: 189 NKESSQSEEAPKENYIHMRARRGQATNSHSLAERI----------------------TGK 226
Query: 325 AVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQS 371
AVMLDEIINYVQSLQ+QVEFLSMKLATVNP ++++++ +L+KDL QS
Sbjct: 227 AVMLDEIINYVQSLQQQVEFLSMKLATVNPEINIDIDRILAKDLLQS 273
>gi|388519201|gb|AFK47662.1| unknown [Lotus japonicus]
Length = 274
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 76/108 (70%)
Query: 254 SKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQD 313
S+ N + K N E K+ +HVRARRGQATDSHSLAERVRR KI+E+++ LQ+
Sbjct: 129 SRIKNNSGRGKRAKSNVTEEEKEKEVVHVRARRGQATDSHSLAERVRRGKINEKLRCLQN 188
Query: 314 LVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNME 361
+VPGC K G AVMLDEIINYVQSLQ QVEFLS+KL + D N E
Sbjct: 189 IVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAASTYYDFNSE 236
>gi|224079313|ref|XP_002305819.1| predicted protein [Populus trichocarpa]
gi|222848783|gb|EEE86330.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 69/82 (84%)
Query: 277 KDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQ 336
K+ IHVRA+RGQATDSHS+AER+RREKI+ +++ LQD+VPGC+K G AVML+EIINYV
Sbjct: 153 KEVIHVRAKRGQATDSHSIAERIRREKINNKLRCLQDIVPGCHKSMGMAVMLEEIINYVH 212
Query: 337 SLQRQVEFLSMKLATVNPRMDL 358
SLQ QVEFLSM+LA + DL
Sbjct: 213 SLQNQVEFLSMELAAASCSNDL 234
>gi|168024073|ref|XP_001764561.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684139|gb|EDQ70543.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 62
Score = 122 bits (307), Expect = 3e-25, Method: Composition-based stats.
Identities = 60/62 (96%), Positives = 61/62 (98%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATDSHSLAERVRREKISERMK+LQDLVPGC KVTGKAVMLDEIINYVQSLQRQ
Sbjct: 1 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQ 60
Query: 342 VE 343
VE
Sbjct: 61 VE 62
>gi|296087271|emb|CBI33645.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 69/89 (77%)
Query: 273 VEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEII 332
++ P + IHVRARRGQATD+HS+AERVRREKI R++ LQDLVPGC K G AVMLDEII
Sbjct: 193 LDKPDEVIHVRARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYKNKGMAVMLDEII 252
Query: 333 NYVQSLQRQVEFLSMKLATVNPRMDLNME 361
NYV SLQ QVEFLS +LA + + N E
Sbjct: 253 NYVHSLQNQVEFLSRELAAASSLHNFNSE 281
>gi|255543172|ref|XP_002512649.1| conserved hypothetical protein [Ricinus communis]
gi|223548610|gb|EEF50101.1| conserved hypothetical protein [Ricinus communis]
Length = 297
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 75/100 (75%), Gaps = 3/100 (3%)
Query: 275 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINY 334
P Y+HVRARRG+ATD HSLAERVRR+KIS RMK LQ LVPGC+K+TGKA +LDEII +
Sbjct: 157 PLTGYVHVRARRGEATDPHSLAERVRRKKISVRMKLLQSLVPGCDKLTGKAQILDEIIRH 216
Query: 335 VQSLQRQVEFLSMKLATVNP---RMDLNMEALLSKDLFQS 371
V SLQ QVEFL+ K + N ++ M L++K+L+ S
Sbjct: 217 VLSLQNQVEFLAAKFTSENGIANEVNYEMNTLVAKELYNS 256
>gi|147810591|emb|CAN71967.1| hypothetical protein VITISV_017400 [Vitis vinifera]
Length = 271
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/94 (63%), Positives = 70/94 (74%), Gaps = 5/94 (5%)
Query: 273 VEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKV-----TGKAVM 327
++ P + IHVRARRGQATD+HS+AERVRREKI R++ LQDLVPGC KV G AVM
Sbjct: 139 LDKPDEVIHVRARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYKVYDPQNKGMAVM 198
Query: 328 LDEIINYVQSLQRQVEFLSMKLATVNPRMDLNME 361
LDEIINYV SLQ QVEFLS +LA + + N E
Sbjct: 199 LDEIINYVHSLQNQVEFLSRELAAASSLHNFNSE 232
>gi|224077848|ref|XP_002305434.1| predicted protein [Populus trichocarpa]
gi|222848398|gb|EEE85945.1| predicted protein [Populus trichocarpa]
Length = 177
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 105/185 (56%), Gaps = 19/185 (10%)
Query: 308 MKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKD 367
MK+LQDLVPGCN +TGKA MLDEIINYVQSLQRQVEFLSMKLA VNPR+D N++ L +K+
Sbjct: 1 MKYLQDLVPGCNNITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDNLFAKE 60
Query: 368 LFQSCG--YVQHSLYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHR 425
F +C + + P + ++ P Q ++ G++ IN + L R
Sbjct: 61 AFPACSTNFPAIGMSPDMTNAAYL--QFNPAQQQLVSCCGLD------MGINPPDMGLRR 112
Query: 426 NHN--IQLPP--INGHGEVGPRVPSLWDDDLQSLVQMGFNQNQPRS-----LNGSMATTQ 476
+ + +P ++ + P WD DL +L + F+Q + + +GS+ +
Sbjct: 113 TTSTPVSIPETFLDSSCFTQIQAPPTWDADLPNLYNVAFDQGRQTTFPVQPFSGSVEASN 172
Query: 477 MKIEM 481
+K+EM
Sbjct: 173 LKMEM 177
>gi|341941279|gb|AEL12217.1| putative cryptochrome-interacting basic helix-loop-helix 5 [Beta
vulgaris]
Length = 225
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 68/87 (78%)
Query: 279 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 338
+++VRARRG+A DSHSLAERVRR+KIS +MK LQ LVPGC+K TGK +LD IINY+ SL
Sbjct: 133 FVYVRARRGEAVDSHSLAERVRRQKISSKMKLLQSLVPGCDKTTGKVPILDTIINYIHSL 192
Query: 339 QRQVEFLSMKLATVNPRMDLNMEALLS 365
Q QV+ L +LA V+P D+N AL S
Sbjct: 193 QDQVKSLMEELALVDPTFDVNYLALES 219
>gi|297728315|ref|NP_001176521.1| Os11g0442650 [Oryza sativa Japonica Group]
gi|255680061|dbj|BAH95249.1| Os11g0442650 [Oryza sativa Japonica Group]
Length = 461
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 174/428 (40%), Gaps = 144/428 (33%)
Query: 118 CYSTPLNSP-------PLPKLNLSMIRGSKSSNNLPIPAADPGFAERAARLSCFAGSQMN 170
CYSTP+ SP P+P L + AAD AERAAR+SC A +
Sbjct: 95 CYSTPVGSPCKPAPAPPVPSL---------------LAAADAMIAERAARMSCLAAAGHG 139
Query: 171 MNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKS-IQRPK 229
A+ S+ L ++ ++ + + +GSS +D+ RKRK+ + +
Sbjct: 140 GGKLSRAASSQSL-LAETAAAGGVHQLPASDGSS----------SDAPCRKRKAPCAKAR 188
Query: 230 AKET-------------PPT-----SDPKVVAENPEDSN-SMRSKQDENKSDSSKTKDNS 270
K+ PP + P+ + P+ ++K+ + +D++ +D +
Sbjct: 189 GKDAATTIAKVLRLLSAPPLQSRRRTSPETMVNFPQSPEPGTKAKKCKLSADAAGDED-T 247
Query: 271 KPV-------------------EPPKDYIHVRARRGQATDSHSLAER------------- 298
KPV EPPKDYIHVRARRGQATDSHSLAER
Sbjct: 248 KPVAGDAGHGGNGKGKVLDAAGEPPKDYIHVRARRGQATDSHSLAERVKAAGIDAANHNF 307
Query: 299 -------------------VRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 339
VRREKISERMK LQDLVPGCNKV + IN
Sbjct: 308 FFSSILAFADAIAAVFHLQVRREKISERMKLLQDLVPGCNKV----AKFSQKIN------ 357
Query: 340 RQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGS 399
L+ L +P M + PG C Y QG+
Sbjct: 358 -----LNFTLQASDPIMPAPLSLPPPPPPLSY---SPEGASPGIC--------YASSQGT 401
Query: 400 HLTSSGINNNAENQFSINALNSSLHRNHNIQLPPING----HGEVGPRVPSLWDDDLQSL 455
+ S + + + + N +H I +P ++G H + G +W+DDLQS+
Sbjct: 402 AMQSV-VTSTKHLETAPTFAN-----HHVIPVPSLDGFHSAHSQAG---SCMWEDDLQSV 452
Query: 456 VQMGFNQN 463
VQMGF N
Sbjct: 453 VQMGFRGN 460
>gi|388493796|gb|AFK34964.1| unknown [Lotus japonicus]
gi|388513685|gb|AFK44904.1| unknown [Lotus japonicus]
Length = 180
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 96/167 (57%), Gaps = 11/167 (6%)
Query: 308 MKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKD 367
MK+LQDLVPGCNK+ GKA MLDEIINYVQSLQRQVEFLSMKLA VNPR+D N++ L K+
Sbjct: 1 MKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFVKE 60
Query: 368 LFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGSHLTS--SGINNNAENQFSINALNSSLHR 425
+F +C S+ + P+ Q L S G+ NN E I + + R
Sbjct: 61 VFPACAQSFPSI-GMQSDMTNHPAYLQFNSAQQLVSYCGGLVNNTE----IIPTDMGVRR 115
Query: 426 NHN--IQLPPINGHGEVGPRV-PSL-WDDDLQSLVQMGFNQNQPRSL 468
N N + +P ++ PSL W+ D Q+L + F+Q + S
Sbjct: 116 NMNVPVSMPETFLDSSCFTQILPSLSWEGDFQNLQSVAFDQGRSSSF 162
>gi|356564005|ref|XP_003550247.1| PREDICTED: transcription factor BEE 1-like [Glycine max]
Length = 268
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 64/79 (81%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RARRGQATDSH+LAERVRR KI+E++++LQ++VPGC K AVMLDEIINYVQSLQ QV
Sbjct: 152 RARRGQATDSHNLAERVRRGKINEKLRYLQNIVPGCYKTMSMAVMLDEIINYVQSLQHQV 211
Query: 343 EFLSMKLATVNPRMDLNME 361
EFLS++L + D N E
Sbjct: 212 EFLSLELTAASTFYDFNSE 230
>gi|255572100|ref|XP_002526990.1| DNA binding protein, putative [Ricinus communis]
gi|223533625|gb|EEF35362.1| DNA binding protein, putative [Ricinus communis]
Length = 189
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/71 (74%), Positives = 62/71 (87%)
Query: 273 VEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEII 332
+E PK+ IHVRA+RGQATDSHSLAERVRRE+I+E+++ LQDLVPGC K G AVMLD II
Sbjct: 112 LEKPKEVIHVRAKRGQATDSHSLAERVRRERINEKLRCLQDLVPGCYKTMGMAVMLDVII 171
Query: 333 NYVQSLQRQVE 343
NYVQSLQ Q+E
Sbjct: 172 NYVQSLQNQIE 182
>gi|147797633|emb|CAN71939.1| hypothetical protein VITISV_038910 [Vitis vinifera]
Length = 381
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/99 (59%), Positives = 68/99 (68%), Gaps = 22/99 (22%)
Query: 275 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINY 334
P +DYIHVRA+RGQAT+SHSLAER+ TGKAVMLDEIINY
Sbjct: 239 PKEDYIHVRAKRGQATNSHSLAERI----------------------TGKAVMLDEIINY 276
Query: 335 VQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSCG 373
VQSLQRQVEFLSMKLATV P M++ +E +LS D+ S G
Sbjct: 277 VQSLQRQVEFLSMKLATVYPEMNVQIERILSSDIHHSKG 315
>gi|223942973|gb|ACN25570.1| unknown [Zea mays]
gi|413951549|gb|AFW84198.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 156
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 91/163 (55%), Gaps = 15/163 (9%)
Query: 327 MLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNM--EALLSKDLFQSCGYVQHSLYPGDC 384
MLDEIINYVQSLQRQVEFLSMKLATVNP++D N LL KD+ Q CG +P +
Sbjct: 1 MLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNSLPNLLLPKDIHQPCGPPH---FPLET 57
Query: 385 SVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPINGHGEVGPRV 444
S P QP GS L S++ L+++ R N Q P +NG + +V
Sbjct: 58 SGAPLPYLSQPHHGSPLGCCMDTQGG----SMHPLDAAFCRPMNPQHPFLNGASDAASQV 113
Query: 445 PSLWDDDLQSLVQMGFNQNQP------RSLNGSMATTQMKIEM 481
+ W DDLQS+V M Q+Q S NGS+ T MK+E+
Sbjct: 114 GTFWQDDLQSVVHMDIGQSQEIAPTSSNSYNGSLQTVHMKMEL 156
>gi|225456606|ref|XP_002267823.1| PREDICTED: transcription factor bHLH79 isoform 2 [Vitis vinifera]
Length = 262
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 77/128 (60%), Gaps = 23/128 (17%)
Query: 242 VAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPK-DYIHVRARRGQATDSHSLAERVR 300
++ P+++ +++ + + K + SKP E K DYIHVRARRGQATDSHSLAERV
Sbjct: 116 ISRTPDENGGSKAELEASSVAGEKPAEESKPAEQSKQDYIHVRARRGQATDSHSLAERV- 174
Query: 301 REKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNM 360
GKA++LDEIINY+QSLQRQVEFLSMKL VN RM+ +
Sbjct: 175 ---------------------IGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNHTV 213
Query: 361 EALLSKDL 368
E KDL
Sbjct: 214 EGFPLKDL 221
>gi|223948547|gb|ACN28357.1| unknown [Zea mays]
Length = 188
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 99/180 (55%), Gaps = 30/180 (16%)
Query: 308 MKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNME--ALLS 365
MK LQDLVPGC+KVTGKAVMLDEIINYVQSLQRQVEFLSMKL+TVNPR++L + +
Sbjct: 1 MKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPRLELGADDSFVPR 60
Query: 366 KDLFQSCGYVQHSLYPGDCSVQTFPSRYQPQQGS-----HLTSS---------GINNNAE 411
D + C S+ + P+ Y +GS + T+ G+ +
Sbjct: 61 DDANKMCAAATSSISMAQQPL-PLPAAYHALEGSSPAFCYTTTPPAPGTAARLGVAASDA 119
Query: 412 NQFSINALNSSLHRNH--NIQLPPINGHG------EVGPRVPSLW---DDDLQSLVQMGF 460
F + +S+ NH + P+ G ++G R SLW DDDLQSLV MGF
Sbjct: 120 KAFEMAPPSSAATVNHAGTAERRPLEGPADENASPQMGGR--SLWEEGDDDLQSLVLMGF 177
>gi|357500329|ref|XP_003620453.1| Transcription factor BEE [Medicago truncatula]
gi|355495468|gb|AES76671.1| Transcription factor BEE [Medicago truncatula]
Length = 263
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 65/98 (66%), Gaps = 9/98 (9%)
Query: 265 KTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGK 324
+ K E K+ +HVRARRGQATDSHSLAERVRR KI+E++K LQ++VPGC K G
Sbjct: 138 RVKSYETEEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKLKCLQNIVPGCYKTMGM 197
Query: 325 AVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEA 362
AVMLDEIINY FLS+KL + D N EA
Sbjct: 198 AVMLDEIINY---------FLSLKLTAASTYYDFNSEA 226
>gi|295913612|gb|ADG58051.1| transcription factor [Lycoris longituba]
Length = 95
Score = 107 bits (267), Expect = 1e-20, Method: Composition-based stats.
Identities = 50/60 (83%), Positives = 55/60 (91%)
Query: 297 ERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM 356
ERVRRE+I ERMK+LQ LVPGCNK+TGKA ML+EIINYVQSLQRQVEFLSMKLA VNP +
Sbjct: 3 ERVRRERIGERMKYLQGLVPGCNKITGKAGMLEEIINYVQSLQRQVEFLSMKLAGVNPEI 62
>gi|20127072|gb|AAM10955.1|AF488599_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 350
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 263 SSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVT 322
S+ T PP+ +RARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T
Sbjct: 119 SASTATGGTVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-T 177
Query: 323 GKAVMLDEIINYVQSLQRQVEFLSM 347
KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 178 DKASMLDEIIDYVEFLQLQVKVLSM 202
>gi|15224109|ref|NP_180003.1| transcription factor bHLH66 [Arabidopsis thaliana]
gi|75315918|sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic
helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH
66; AltName: Full=Transcription factor EN 95; AltName:
Full=bHLH transcription factor bHLH066
gi|4115386|gb|AAD03387.1| unknown protein [Arabidopsis thaliana]
gi|51970882|dbj|BAD44133.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
gi|111074492|gb|ABH04619.1| At2g24260 [Arabidopsis thaliana]
gi|330252457|gb|AEC07551.1| transcription factor bHLH66 [Arabidopsis thaliana]
Length = 350
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 263 SSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVT 322
S+ T PP+ +RARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T
Sbjct: 119 SASTATGGTVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-T 177
Query: 323 GKAVMLDEIINYVQSLQRQVEFLSM 347
KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 178 DKASMLDEIIDYVKFLQLQVKVLSM 202
>gi|51970922|dbj|BAD44153.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
Length = 350
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 263 SSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVT 322
S+ T PP+ +RARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T
Sbjct: 119 SASTATGGTVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-T 177
Query: 323 GKAVMLDEIINYVQSLQRQVEFLSM 347
KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 178 DKASMLDEIIDYVKFLQLQVKVLSM 202
>gi|297825371|ref|XP_002880568.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326407|gb|EFH56827.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 263 SSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVT 322
S+ T PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T
Sbjct: 119 SASTATGGTVAVPPQSRTKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-T 177
Query: 323 GKAVMLDEIINYVQSLQRQVEFLSM 347
KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 178 DKASMLDEIIDYVKFLQLQVKVLSM 202
>gi|116309555|emb|CAH66617.1| OSIGBa0144C23.3 [Oryza sativa Indica Group]
Length = 157
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/61 (75%), Positives = 54/61 (88%)
Query: 308 MKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKD 367
MK LQ LVPGCNK+TGKA+MLDEIINYVQSLQRQVEFLSMKLAT+NP++D + + SKD
Sbjct: 1 MKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLSMKLATMNPQLDFDSHYMPSKD 60
Query: 368 L 368
+
Sbjct: 61 M 61
>gi|20127075|gb|AAM10956.1|AF488601_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 5/102 (4%)
Query: 246 PEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKIS 305
P+ S Q + + ++ ++P PK VRARRGQATD HS+AER+RRE+I+
Sbjct: 98 PQGSGGQTQTQSQATASATTGGATAQPQTKPK----VRARRGQATDPHSIAERLRRERIA 153
Query: 306 ERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 154 ERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQLQVKVLSM 194
>gi|449530006|ref|XP_004171988.1| PREDICTED: transcription factor UNE12-like, partial [Cucumis
sativus]
Length = 219
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
+PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP CNK T +A MLDEI++
Sbjct: 50 QPPQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNK-TDRAAMLDEIVD 108
Query: 334 YVQSLQRQVEFLSM 347
YV+ L+ QV+ LSM
Sbjct: 109 YVKFLRLQVKVLSM 122
>gi|30688869|ref|NP_194827.2| transcription factor bHLH69 [Arabidopsis thaliana]
gi|218563529|sp|Q8S3D5.2|BH069_ARATH RecName: Full=Transcription factor bHLH69; AltName: Full=Basic
helix-loop-helix protein 69; Short=AtbHLH69; Short=bHLH
69; AltName: Full=Transcription factor EN 94; AltName:
Full=bHLH transcription factor bHLH069
gi|225898837|dbj|BAH30549.1| hypothetical protein [Arabidopsis thaliana]
gi|332660437|gb|AEE85837.1| transcription factor bHLH69 [Arabidopsis thaliana]
Length = 310
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 5/102 (4%)
Query: 246 PEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKIS 305
P+ S Q + + ++ ++P PK VRARRGQATD HS+AER+RRE+I+
Sbjct: 98 PQGSGGQTQTQSQATASATTGGATAQPQTKPK----VRARRGQATDPHSIAERLRRERIA 153
Query: 306 ERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 154 ERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQLQVKVLSM 194
>gi|326521778|dbj|BAK00465.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 173
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 9/93 (9%)
Query: 247 EDSNSMRSKQDENKSDSSKTKDNSKPVEPPK-DYIHVRARRGQATDSHSLAERVRREKIS 305
+D+ S R + + ++SK D + P PPK D+IHVRARRGQATDSHSLAER RREKI+
Sbjct: 86 DDNGSFRKDAEADSRNASKAVDQNPP--PPKQDFIHVRARRGQATDSHSLAERARREKIT 143
Query: 306 ERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 338
ERMK LQDLVPGCNK ++ + Y QS+
Sbjct: 144 ERMKILQDLVPGCNK------LMRPWLGYWQSI 170
>gi|125564328|gb|EAZ09708.1| hypothetical protein OsI_31996 [Oryza sativa Indica Group]
Length = 236
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 63/77 (81%), Gaps = 3/77 (3%)
Query: 283 RARRGQATDSHSL---AERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 339
+ R+ + D+ SL +VRRE+ISERM+ LQ LVPGC+KVTGKA++LDEIINYVQSLQ
Sbjct: 59 KKRKPREEDTASLNSAHSKVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQ 118
Query: 340 RQVEFLSMKLATVNPRM 356
QVEFLSM++A+++P +
Sbjct: 119 NQVEFLSMRIASLSPVL 135
>gi|2980768|emb|CAA18195.1| putative protein [Arabidopsis thaliana]
gi|7270000|emb|CAB79816.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 5/102 (4%)
Query: 246 PEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKIS 305
P+ S Q + + ++ ++P PK VRARRGQATD HS+AER+RRE+I+
Sbjct: 155 PQGSGGQTQTQSQATASATTGGATAQPQTKPK----VRARRGQATDPHSIAERLRRERIA 210
Query: 306 ERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 211 ERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQLQVKVLSM 251
>gi|449435746|ref|XP_004135655.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 318
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
+PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP CNK T +A MLDEI++
Sbjct: 149 QPPQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNK-TDRAAMLDEIVD 207
Query: 334 YVQSLQRQVEFLSM 347
YV+ L+ QV+ LSM
Sbjct: 208 YVKFLRLQVKVLSM 221
>gi|293336149|ref|NP_001169231.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975699|gb|ACN32037.1| unknown [Zea mays]
gi|414885895|tpg|DAA61909.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 332
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 102/201 (50%), Gaps = 33/201 (16%)
Query: 151 DPGFAERAARLSCFAGSQMN--------------MNSSVSASDSKKLRVSRS------ST 190
D GF ERAAR SCF G MNS+ S S L R+
Sbjct: 95 DSGFIERAARASCFGGGGGGGVMAAFGAAADHQPMNSAFSGSSEALLDHQRTKDGSDKGE 154
Query: 191 PESNNNAD----SKEGSSLSEQITSQTVTDSNPRKR----KSIQRPKAKETPPTSDPKVV 242
PE N S E ++ + +S+ +DS R+R + ++ P S + V
Sbjct: 155 PELGRNGHDGVLSSEAAAAGD-CSSKGTSDSKKRRRPNEVMGGDQVQSSNLPADSANESV 213
Query: 243 --AENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVR 300
+ E+S+ + KS ++ S+ + +DYIHVRARRGQAT+SHSLAER+R
Sbjct: 214 HSKDKGEESSLATTTTGPGKSKGKGARETSESQK--EDYIHVRARRGQATNSHSLAERLR 271
Query: 301 REKISERMKFLQDLVPGCNKV 321
REKISERMK LQDLVPGC+KV
Sbjct: 272 REKISERMKLLQDLVPGCSKV 292
>gi|357118504|ref|XP_003560994.1| PREDICTED: transcription factor bHLH66-like [Brachypodium
distachyon]
Length = 388
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/73 (68%), Positives = 59/73 (80%), Gaps = 2/73 (2%)
Query: 275 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINY 334
PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+Y
Sbjct: 177 PPRQ-TRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDY 234
Query: 335 VQSLQRQVEFLSM 347
V+ LQ QV+ LSM
Sbjct: 235 VKFLQLQVKVLSM 247
>gi|413968544|gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
Length = 303
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
+PP VRARRGQATD HS+AER+RRE+ISER+K LQ+LVP CNK T +A MLDEI++
Sbjct: 133 QPPSIRPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNK-TDRAAMLDEILD 191
Query: 334 YVQSLQRQVEFLSM 347
YV+ L+ QV+ LSM
Sbjct: 192 YVKFLRLQVKVLSM 205
>gi|224143968|ref|XP_002325140.1| predicted protein [Populus trichocarpa]
gi|222866574|gb|EEF03705.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/80 (62%), Positives = 61/80 (76%), Gaps = 4/80 (5%)
Query: 268 DNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVM 327
+ P +P + VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA M
Sbjct: 26 NGGAPAQPRQ---RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASM 81
Query: 328 LDEIINYVQSLQRQVEFLSM 347
LDEII+YV+ LQ QV+ LSM
Sbjct: 82 LDEIIDYVKFLQLQVKVLSM 101
>gi|302809450|ref|XP_002986418.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
gi|300145954|gb|EFJ12627.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
Length = 355
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 136 VRARRGQATDPHSIAERLRREKIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 194
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 195 VKVLSM 200
>gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia]
Length = 360
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
Query: 263 SSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVT 322
S + P PK VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T
Sbjct: 229 SGSAGGGTTPAAQPKQQ-RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-T 286
Query: 323 GKAVMLDEIINYVQSLQRQVEFLSM 347
KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 287 DKASMLDEIIDYVKFLQLQVKVLSM 311
>gi|125554388|gb|EAY99993.1| hypothetical protein OsI_21996 [Oryza sativa Indica Group]
Length = 477
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 259 NKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC 318
N S + + NS P RARRGQATD HS+AER+RREKISERMK LQDLVP
Sbjct: 292 NHSSDVEPQANSAPGNSANAKPRTRARRGQATDPHSIAERLRREKISERMKNLQDLVPNS 351
Query: 319 NKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
NK KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 352 NKAD-KASMLDEIIDYVKFLQLQVKVLSM 379
>gi|15242922|ref|NP_200609.1| transcription factor bHLH82 [Arabidopsis thaliana]
gi|75311535|sp|Q9LSQ3.1|BH082_ARATH RecName: Full=Transcription factor bHLH82; AltName: Full=Basic
helix-loop-helix protein 82; Short=AtbHLH82; Short=bHLH
82; AltName: Full=Transcription factor EN 96; AltName:
Full=bHLH transcription factor bHLH082
gi|8885595|dbj|BAA97525.1| unnamed protein product [Arabidopsis thaliana]
gi|332009604|gb|AED96987.1| transcription factor bHLH82 [Arabidopsis thaliana]
Length = 297
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 65/86 (75%), Gaps = 6/86 (6%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII YV+ LQ Q
Sbjct: 99 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASMLDEIIEYVRFLQLQ 157
Query: 342 VEFLSMK----LATVNPRMD-LNMEA 362
V+ LSM +V PR++ L+ EA
Sbjct: 158 VKVLSMSRLGGAGSVGPRLNGLSAEA 183
>gi|77999289|gb|ABB16991.1| unknown [Solanum tuberosum]
Length = 304
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
PP VRARRGQATD HS+AER+RRE+ISER+K LQ+LVP CNK T +A MLDEI++
Sbjct: 134 HPPSIRPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNK-TDRAAMLDEILD 192
Query: 334 YVQSLQRQVEFLSM 347
YV+ L+ QV+ LSM
Sbjct: 193 YVKFLRLQVKVLSM 206
>gi|168048453|ref|XP_001776681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671973|gb|EDQ58517.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 281 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 340
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 31 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNK-TDKASMLDEIIDYVKFLQL 89
Query: 341 QVEFLSM 347
QV+ LSM
Sbjct: 90 QVKVLSM 96
>gi|413951547|gb|AFW84196.1| putative HLH DNA-binding domain superfamily protein, partial [Zea
mays]
Length = 236
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/60 (81%), Positives = 52/60 (86%), Gaps = 2/60 (3%)
Query: 311 LQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNM--EALLSKDL 368
LQDLVPGCNKV GKAVMLDEIINYVQSLQRQVEFLSMKLATVNP++D N LL KD+
Sbjct: 121 LQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNSLPNLLLPKDV 180
>gi|356556714|ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 475
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 253 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 311
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 312 VKVLSM 317
>gi|356530637|ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 452
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 225 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 283
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 284 VKVLSM 289
>gi|168043431|ref|XP_001774188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674456|gb|EDQ60964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 281 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 340
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 30 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNK-TDKASMLDEIIDYVKFLQL 88
Query: 341 QVEFLSM 347
QV+ LSM
Sbjct: 89 QVKVLSM 95
>gi|297743632|emb|CBI36515.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 60/76 (78%), Gaps = 4/76 (5%)
Query: 272 PVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEI 331
P +P + VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEI
Sbjct: 97 PAQPRQ---RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEI 152
Query: 332 INYVQSLQRQVEFLSM 347
I+YV+ LQ QV+ LSM
Sbjct: 153 IDYVKFLQLQVKVLSM 168
>gi|357480125|ref|XP_003610348.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511403|gb|AES92545.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 400
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 196 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQVQ 254
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 255 VKVLSM 260
>gi|357480123|ref|XP_003610347.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511402|gb|AES92544.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 403
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 199 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQVQ 257
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 258 VKVLSM 263
>gi|449457905|ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
gi|449529094|ref|XP_004171536.1| PREDICTED: uncharacterized protein LOC101228749 [Cucumis sativus]
Length = 422
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 204 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 262
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 263 VKVLSM 268
>gi|302764076|ref|XP_002965459.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
gi|302825088|ref|XP_002994179.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300137980|gb|EFJ04769.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300166273|gb|EFJ32879.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
Length = 143
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 281 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 340
VRARRGQATD HS+AER+RRE+I+ERMK LQDLVP NK T KA MLDEI++YV+ LQ
Sbjct: 3 RVRARRGQATDPHSIAERLRRERIAERMKALQDLVPNANK-TDKASMLDEIVDYVKFLQL 61
Query: 341 QVEFLSM 347
QV+ LSM
Sbjct: 62 QVKVLSM 68
>gi|297796719|ref|XP_002866244.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312079|gb|EFH42503.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 64/86 (74%), Gaps = 6/86 (6%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII YV+ LQ Q
Sbjct: 99 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASMLDEIIEYVRFLQLQ 157
Query: 342 VEFLSMK----LATVNPRMD-LNMEA 362
V+ LSM V PR++ L+ EA
Sbjct: 158 VKVLSMSRLGGAGAVGPRLNGLSAEA 183
>gi|227345480|gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
Length = 386
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 174 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 232
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 233 VKVLSM 238
>gi|242095026|ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
gi|241916226|gb|EER89370.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
Length = 489
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RREKIS+RMK LQDLVP NK KA MLDEII+YV+ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKSLQDLVPNSNKAD-KASMLDEIIDYVKFLQLQ 378
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|356564915|ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
Length = 369
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 197 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 255
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 256 VKVLSM 261
>gi|255565001|ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
Query: 275 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINY 334
P + VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+Y
Sbjct: 249 PAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDY 307
Query: 335 VQSLQRQVEFLSM 347
V+ LQ QV+ LSM
Sbjct: 308 VKFLQLQVKVLSM 320
>gi|414589493|tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 471
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 59/73 (80%), Gaps = 3/73 (4%)
Query: 275 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINY 334
PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEI++Y
Sbjct: 235 PPRQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIVDY 291
Query: 335 VQSLQRQVEFLSM 347
V+ LQ QV+ LSM
Sbjct: 292 VKFLQLQVKVLSM 304
>gi|357137415|ref|XP_003570296.1| PREDICTED: uncharacterized protein LOC100827783 [Brachypodium
distachyon]
Length = 351
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSANK-TDKASMLDEIIDYVKFLQVQ 202
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 203 VKVLSM 208
>gi|226496023|ref|NP_001141950.1| uncharacterized protein LOC100274099 [Zea mays]
gi|223945379|gb|ACN26773.1| unknown [Zea mays]
gi|414589494|tpg|DAA40065.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 470
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 59/73 (80%), Gaps = 3/73 (4%)
Query: 275 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINY 334
PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEI++Y
Sbjct: 234 PPRQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIVDY 290
Query: 335 VQSLQRQVEFLSM 347
V+ LQ QV+ LSM
Sbjct: 291 VKFLQLQVKVLSM 303
>gi|55773907|dbj|BAD72512.1| bHLH transcription factor PTF1-like [Oryza sativa Japonica Group]
Length = 420
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/73 (68%), Positives = 59/73 (80%), Gaps = 2/73 (2%)
Query: 275 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINY 334
PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+Y
Sbjct: 198 PPRQQ-RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDY 255
Query: 335 VQSLQRQVEFLSM 347
V+ LQ QV+ LSM
Sbjct: 256 VKFLQLQVKVLSM 268
>gi|218197712|gb|EEC80139.1| hypothetical protein OsI_21931 [Oryza sativa Indica Group]
Length = 420
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/73 (68%), Positives = 59/73 (80%), Gaps = 2/73 (2%)
Query: 275 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINY 334
PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+Y
Sbjct: 198 PPRQQ-RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDY 255
Query: 335 VQSLQRQVEFLSM 347
V+ LQ QV+ LSM
Sbjct: 256 VKFLQLQVKVLSM 268
>gi|195616290|gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 481
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RREKIS+RMK LQDLVP NK KA MLDEII+YV+ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKAD-KASMLDEIIDYVKFLQLQ 378
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|162460249|ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
gi|93359745|gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays]
Length = 481
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RREKIS+RMK LQDLVP NK KA MLDEII+YV+ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKAD-KASMLDEIIDYVKFLQLQ 378
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|413943961|gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 473
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RREKIS+RMK LQDLVP NK KA MLDEII+YV+ LQ Q
Sbjct: 317 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKAD-KASMLDEIIDYVKFLQLQ 375
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 376 VKVLSM 381
>gi|212724016|ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
gi|194691028|gb|ACF79598.1| unknown [Zea mays]
gi|323388613|gb|ADX60111.1| bHLH transcription factor [Zea mays]
Length = 438
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RREKIS+RMK LQDLVP NK KA MLDEII+YV+ LQ Q
Sbjct: 282 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDYVKFLQLQ 340
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 341 VKVLSM 346
>gi|242037799|ref|XP_002466294.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
gi|241920148|gb|EER93292.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
Length = 283
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
+PP VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK T +AVMLDEI++
Sbjct: 114 QPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAVMLDEILD 172
Query: 334 YVQSLQRQVEFLSM 347
YV+ L+ QV+ LSM
Sbjct: 173 YVKFLRLQVKVLSM 186
>gi|297798868|ref|XP_002867318.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313154|gb|EFH43577.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 128 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQLQ 186
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 187 VKVLSM 192
>gi|295913203|gb|ADG57860.1| transcription factor [Lycoris longituba]
Length = 204
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII YV+ LQ Q
Sbjct: 30 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIGYVKFLQLQ 88
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 89 VKVLSM 94
>gi|449443257|ref|XP_004139396.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
gi|449523179|ref|XP_004168602.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
Length = 421
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 217 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 275
Query: 342 VEFLSM 347
V+ LS+
Sbjct: 276 VKVLSV 281
>gi|359484248|ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
Length = 536
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII YV+ LQ Q
Sbjct: 296 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIEYVKFLQLQ 354
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 355 VKVLSM 360
>gi|46390356|dbj|BAD15821.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
gi|215768923|dbj|BAH01152.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623080|gb|EEE57212.1| hypothetical protein OsJ_07173 [Oryza sativa Japonica Group]
Length = 524
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RREKIS+RMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 314 VRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNK-TNKASMLDEIIDYVKFLQLQ 372
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 373 VKVLSM 378
>gi|125539931|gb|EAY86326.1| hypothetical protein OsI_07700 [Oryza sativa Indica Group]
Length = 524
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RREKIS+RMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 314 VRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNK-TNKASMLDEIIDYVKFLQLQ 372
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 373 VKVLSM 378
>gi|326498007|dbj|BAJ94866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
RARRGQATD HS+AER+RREKISERMK LQDLVP NK K+ MLDEII+YV+ LQ Q
Sbjct: 320 ARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKAD-KSSMLDEIIDYVKFLQLQ 378
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|359487888|ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
Length = 331
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
PP VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T +A MLDEI++
Sbjct: 161 HPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANK-TDRAAMLDEIVD 219
Query: 334 YVQSLQRQVEFLSM 347
YV+ L+ QV+ LSM
Sbjct: 220 YVKFLRLQVKVLSM 233
>gi|297738502|emb|CBI27747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII YV+ LQ Q
Sbjct: 149 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIEYVKFLQLQ 207
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 208 VKVLSM 213
>gi|147836162|emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
Length = 486
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQAT HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 260 VRARRGQATHPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 318
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 319 VKVLSM 324
>gi|413937342|gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 9/101 (8%)
Query: 255 KQDENKSDSSKTKDNSKPVEPPKDYI--------HVRARRGQATDSHSLAERVRREKISE 306
+Q N++ T N+ P P + VRARRGQATD HS+AER+RREKIS+
Sbjct: 263 EQSSNEASGGGTGLNAPPFMVPANGAAGNGAPKPRVRARRGQATDPHSIAERLRREKISD 322
Query: 307 RMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
RMK LQ+LVP N+ T KA MLDEII YV+ LQ QV+ LSM
Sbjct: 323 RMKNLQELVPNSNR-TDKASMLDEIIEYVKFLQLQVKVLSM 362
>gi|298204851|emb|CBI34158.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
Query: 275 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINY 334
PP VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T +A MLDEI++Y
Sbjct: 92 PPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANK-TDRAAMLDEIVDY 150
Query: 335 VQSLQRQVEFLSM 347
V+ L+ QV+ LSM
Sbjct: 151 VKFLRLQVKVLSM 163
>gi|225432880|ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297737150|emb|CBI26351.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
PP VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T +A MLDEI++
Sbjct: 143 HPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNK-TDRAAMLDEIVD 201
Query: 334 YVQSLQRQVEFLSM 347
YV+ L+ QV+ LSM
Sbjct: 202 YVKFLRLQVKVLSM 215
>gi|224131266|ref|XP_002328496.1| predicted protein [Populus trichocarpa]
gi|222838211|gb|EEE76576.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
+PP VRARRGQATD HS+AER+RR +I+ER+K LQ+LVP CNK T +A MLDEI++
Sbjct: 12 QPPGIRPRVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNK-TDRAAMLDEIVD 70
Query: 334 YVQSLQRQVEFLSM 347
YV+ L+ QV+ LSM
Sbjct: 71 YVKFLRLQVKVLSM 84
>gi|255580949|ref|XP_002531293.1| conserved hypothetical protein [Ricinus communis]
gi|223529126|gb|EEF31106.1| conserved hypothetical protein [Ricinus communis]
Length = 326
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
+PP VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T +A M+DEI++
Sbjct: 155 QPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPTANK-TDRAAMIDEIVD 213
Query: 334 YVQSLQRQVEFLSM 347
YV+ L+ QV+ LSM
Sbjct: 214 YVKFLRLQVKVLSM 227
>gi|356576702|ref|XP_003556469.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 331
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
+PP VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T +A MLDEI++
Sbjct: 161 QPPGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINK-TDRAAMLDEIVD 219
Query: 334 YVQSLQRQVEFLSM 347
YV+ L+ QV+ LSM
Sbjct: 220 YVKFLRLQVKVLSM 233
>gi|356535169|ref|XP_003536121.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 328
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
+PP VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T +A MLDEI++
Sbjct: 158 QPPGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINK-TDRAAMLDEIVD 216
Query: 334 YVQSLQRQVEFLSM 347
YV+ L+ QV+ LSM
Sbjct: 217 YVKFLRLQVKVLSM 230
>gi|226495509|ref|NP_001152044.1| LOC100285681 [Zea mays]
gi|195652123|gb|ACG45529.1| BHLH transcription factor [Zea mays]
gi|413932798|gb|AFW67349.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
+PP VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK T +A MLDEI++
Sbjct: 116 QPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILD 174
Query: 334 YVQSLQRQVEFLSM 347
YV+ L+ QV+ LSM
Sbjct: 175 YVKFLRLQVKVLSM 188
>gi|242047606|ref|XP_002461549.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
gi|241924926|gb|EER98070.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
Length = 277
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
+PP VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK T +A MLDEI++
Sbjct: 107 QPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILD 165
Query: 334 YVQSLQRQVEFLSM 347
YV+ L+ QV+ LSM
Sbjct: 166 YVKFLRLQVKVLSM 179
>gi|147771925|emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
Length = 337
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
PP VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T +A MLDEI++
Sbjct: 167 HPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNK-TDRAAMLDEIVD 225
Query: 334 YVQSLQRQVEFLSM 347
YV+ L+ QV+ LSM
Sbjct: 226 YVKFLRLQVKVLSM 239
>gi|224068580|ref|XP_002326150.1| predicted protein [Populus trichocarpa]
gi|222833343|gb|EEE71820.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 281 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 340
VRARRG ATD HS+AER+RREKI+ERMK LQ+LVP NKV KA MLDEII YV+ LQ
Sbjct: 239 RVRARRGHATDPHSIAERLRREKIAERMKNLQELVPNSNKVD-KASMLDEIIEYVKFLQL 297
Query: 341 QVEFLSM 347
QV+ LSM
Sbjct: 298 QVKVLSM 304
>gi|194688984|gb|ACF78576.1| unknown [Zea mays]
gi|238014612|gb|ACR38341.1| unknown [Zea mays]
gi|413952840|gb|AFW85489.1| pi starvation-induced transcription factor1 [Zea mays]
Length = 481
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RREKIS+RMK LQDLVP NK KA MLDEII++V+ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKAD-KASMLDEIIDHVKFLQLQ 378
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|226496235|ref|NP_001140213.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194698524|gb|ACF83346.1| unknown [Zea mays]
gi|195636992|gb|ACG37964.1| BHLH transcription factor [Zea mays]
gi|414883773|tpg|DAA59787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
+PP VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK T +A MLDEI++
Sbjct: 108 QPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILD 166
Query: 334 YVQSLQRQVEFLSM 347
YV+ L+ QV+ LSM
Sbjct: 167 YVKFLRLQVKVLSM 180
>gi|194396125|gb|ACF60480.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 478
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 259 NKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC 318
N S + + NS P RARRGQATD HS+AER+RREKISERMK LQ LVP
Sbjct: 293 NHSSDVEPQANSAPGNSANAKPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNS 352
Query: 319 NKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
NK KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 353 NKAD-KASMLDEIIDYVKFLQLQVKVLSM 380
>gi|29424047|gb|AAO73566.1| bHLH transcription factor PTF1 [Oryza sativa]
Length = 478
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 259 NKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC 318
N S + + NS P RARRGQATD HS+AER+RREKISERMK LQ LVP
Sbjct: 293 NHSSDVEPQANSAPGNSANAKPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNS 352
Query: 319 NKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
NK KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 353 NKAD-KASMLDEIIDYVKFLQLQVKVLSM 380
>gi|224123420|ref|XP_002319074.1| predicted protein [Populus trichocarpa]
gi|222857450|gb|EEE94997.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
+PP VRARRGQATD HS+AER+RR +I+ER+K LQ+LVP CNK T +A MLDEI++
Sbjct: 8 QPPGIRPRVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNK-TDRAAMLDEIVD 66
Query: 334 YVQSLQRQVEFLSM 347
YV+ L+ Q++ LSM
Sbjct: 67 YVKFLRLQIKVLSM 80
>gi|115466888|ref|NP_001057043.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|51090797|dbj|BAD35275.1| bHLH transcription factor PTF1 [Oryza sativa Japonica Group]
gi|113595083|dbj|BAF18957.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|125596339|gb|EAZ36119.1| hypothetical protein OsJ_20430 [Oryza sativa Japonica Group]
gi|215686762|dbj|BAG89612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 259 NKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC 318
N S + + NS P RARRGQATD HS+AER+RREKISERMK LQ LVP
Sbjct: 293 NHSSDVEPQANSAPGNSANAKPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNS 352
Query: 319 NKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
NK KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 353 NKAD-KASMLDEIIDYVKFLQLQVKVLSM 380
>gi|115345831|gb|ABI95371.1| PTF1 [Triticum aestivum]
Length = 480
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 65/95 (68%), Gaps = 8/95 (8%)
Query: 253 RSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQ 312
S +NK++S+ NS +P RARRGQATD HS+AER+RREKISERMK LQ
Sbjct: 297 HSADAQNKANSAN--GNSASAKP-----RARARRGQATDPHSIAERLRREKISERMKNLQ 349
Query: 313 DLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
DLVP NK K+ MLDEII+YV+ LQ QV+ L M
Sbjct: 350 DLVPNSNKAD-KSSMLDEIIDYVKFLQLQVKVLCM 383
>gi|115455925|ref|NP_001051563.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|31126765|gb|AAP44685.1| unknown protein [Oryza sativa Japonica Group]
gi|108711561|gb|ABF99356.1| Lipoamide dehydrogenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550034|dbj|BAF13477.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|215737529|dbj|BAG96659.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193907|gb|EEC76334.1| hypothetical protein OsI_13903 [Oryza sativa Indica Group]
Length = 294
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
+PP VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK T +A MLDEI++
Sbjct: 125 QPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILD 183
Query: 334 YVQSLQRQVEFLSM 347
YV+ L+ QV+ LSM
Sbjct: 184 YVKFLRLQVKVLSM 197
>gi|51090798|dbj|BAD35276.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
Length = 401
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 259 NKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC 318
N S + + NS P RARRGQATD HS+AER+RREKISERMK LQ LVP
Sbjct: 216 NHSSDVEPQANSAPGNSANAKPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNS 275
Query: 319 NKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
NK KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 276 NKAD-KASMLDEIIDYVKFLQLQVKVLSM 303
>gi|413968542|gb|AFW90608.1| beta-fructofuranosidase protein [Solanum tuberosum]
Length = 298
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 61/75 (81%), Gaps = 3/75 (4%)
Query: 275 PPKDYIH--VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEII 332
P + IH VRARRGQATD HS+AER+RRE+ISER+K LQ+LVP CNK T +A ++DEI+
Sbjct: 125 PHQPAIHPRVRARRGQATDPHSIAERLRRERISERIKALQELVPNCNK-TDRAALVDEIL 183
Query: 333 NYVQSLQRQVEFLSM 347
+YV+ L+ QV+ LSM
Sbjct: 184 DYVKFLRLQVKVLSM 198
>gi|222636553|gb|EEE66685.1| hypothetical protein OsJ_23336 [Oryza sativa Japonica Group]
Length = 342
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RRE+I+ERM+ LQDLVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 181 VRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNK-TDRAAMLDEILDYVKFLRLQ 239
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 240 VKVLSM 245
>gi|222625964|gb|EEE60096.1| hypothetical protein OsJ_12958 [Oryza sativa Japonica Group]
Length = 294
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
+PP VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK T +A MLDEI++
Sbjct: 125 QPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILD 183
Query: 334 YVQSLQRQVEFLSM 347
YV+ L+ QV+ LSM
Sbjct: 184 YVKFLRLQVKVLSM 197
>gi|194696204|gb|ACF82186.1| unknown [Zea mays]
gi|414883772|tpg|DAA59786.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 193
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
+PP VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK T +A MLDEI++
Sbjct: 16 QPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILD 74
Query: 334 YVQSLQRQVEFLSM 347
YV+ L+ QV+ LSM
Sbjct: 75 YVKFLRLQVKVLSM 88
>gi|255550301|ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
Length = 592
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP +KV KA MLDEII YV+ LQ Q
Sbjct: 351 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSSKVD-KASMLDEIIEYVKFLQLQ 409
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 410 VKVLSM 415
>gi|357124947|ref|XP_003564158.1| PREDICTED: uncharacterized protein LOC100841109 [Brachypodium
distachyon]
Length = 482
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/65 (72%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RARRGQATD HS+AER+RREKISERMK LQ+LVP NK K+ MLDEII+YV+ LQ QV
Sbjct: 322 RARRGQATDPHSIAERLRREKISERMKNLQELVPNSNKAD-KSSMLDEIIDYVKFLQLQV 380
Query: 343 EFLSM 347
+ LSM
Sbjct: 381 KVLSM 385
>gi|226492543|ref|NP_001151181.1| LOC100284814 [Zea mays]
gi|195644858|gb|ACG41897.1| BHLH transcription factor [Zea mays]
Length = 390
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RA+RGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV
Sbjct: 189 RAKRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQV 247
Query: 343 EFLSM 347
+ LSM
Sbjct: 248 KVLSM 252
>gi|125557459|gb|EAZ02995.1| hypothetical protein OsI_25136 [Oryza sativa Indica Group]
Length = 293
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RRE+I+ERM+ LQDLVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 132 VRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNK-TDRAAMLDEILDYVKFLRLQ 190
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 191 VKVLSM 196
>gi|242063376|ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
Length = 393
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RA+RGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV
Sbjct: 196 RAKRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQV 254
Query: 343 EFLSM 347
+ LSM
Sbjct: 255 KVLSM 259
>gi|413952903|gb|AFW85552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RA+RGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV
Sbjct: 195 RAKRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVRFLQLQV 253
Query: 343 EFLSM 347
+ LSM
Sbjct: 254 KVLSM 258
>gi|357119229|ref|XP_003561348.1| PREDICTED: transcription factor UNE12-like [Brachypodium
distachyon]
Length = 288
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Query: 271 KPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDE 330
+P +PP RARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK T +A MLDE
Sbjct: 115 QPHQPPAPRPKQRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDE 173
Query: 331 IINYVQSLQRQVEFLSM 347
I++YV+ L+ QV+ LSM
Sbjct: 174 ILDYVKFLRLQVKVLSM 190
>gi|223702396|gb|ACN21629.1| putative basic helix-loop-helix protein BHLH2 [Lotus japonicus]
gi|388506732|gb|AFK41432.1| unknown [Lotus japonicus]
Length = 342
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Query: 269 NSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVML 328
N+ PP VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK + +A ML
Sbjct: 167 NAHMQHPPGIRPRVRARRGQATDPHSIAERLRRERIAERMRALQELVPSINK-SDRAAML 225
Query: 329 DEIINYVQSLQRQVEFLSM 347
DEI++YV+ L+ QV+ LSM
Sbjct: 226 DEIVDYVKFLRLQVKVLSM 244
>gi|323388949|gb|ADX60279.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 294
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
+PP VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK T +A MLDEI++
Sbjct: 125 QPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILD 183
Query: 334 YVQSLQRQVEFLSM 347
YV+ L+ QV+ LS+
Sbjct: 184 YVKFLRLQVKVLSI 197
>gi|326505424|dbj|BAJ95383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 199
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 62/90 (68%), Gaps = 19/90 (21%)
Query: 242 VAENPEDSNSM---------RSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDS 292
V+ PE SNSM +++ E+ SD TK+N Y+H+RA+RGQAT+S
Sbjct: 99 VSSQPE-SNSMERDNRKISPKTQSKEDSSDGDGTKEN---------YVHLRAKRGQATNS 148
Query: 293 HSLAERVRREKISERMKFLQDLVPGCNKVT 322
HSLAER+RR+KISERMK LQDLVPGCNKVT
Sbjct: 149 HSLAERLRRKKISERMKLLQDLVPGCNKVT 178
>gi|388509910|gb|AFK43021.1| unknown [Medicago truncatula]
Length = 102
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 51/63 (80%)
Query: 308 MKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKD 367
MK LQDLVPGCNKV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++ +EA KD
Sbjct: 1 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNTGIEASPPKD 60
Query: 368 LFQ 370
Q
Sbjct: 61 YGQ 63
>gi|297726953|ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group]
gi|50253024|dbj|BAD29274.1| bHLH transcription factor PTF1-like protein [Oryza sativa Japonica
Group]
gi|255678901|dbj|BAH94568.1| Os09g0417400 [Oryza sativa Japonica Group]
Length = 499
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 54/64 (84%), Gaps = 2/64 (3%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKV--TGKAVMLDEIINYVQSLQ 339
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK+ T KA MLDEII+YV+ LQ
Sbjct: 250 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQ 309
Query: 340 RQVE 343
QV+
Sbjct: 310 LQVK 313
>gi|218202150|gb|EEC84577.1| hypothetical protein OsI_31377 [Oryza sativa Indica Group]
Length = 414
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 159 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 217
Query: 342 VE 343
V+
Sbjct: 218 VK 219
>gi|222641577|gb|EEE69709.1| hypothetical protein OsJ_29376 [Oryza sativa Japonica Group]
Length = 410
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 55/66 (83%), Gaps = 3/66 (4%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 250 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 308
Query: 342 VEFLSM 347
V LSM
Sbjct: 309 V--LSM 312
>gi|225445889|ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
Length = 519
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 52/65 (80%), Gaps = 5/65 (7%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKV-----TGKAVMLDEIINYVQ 336
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NKV T KA MLDEII+YV+
Sbjct: 285 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKVIHPTLTDKASMLDEIIDYVK 344
Query: 337 SLQRQ 341
LQ Q
Sbjct: 345 FLQLQ 349
>gi|357142621|ref|XP_003572635.1| PREDICTED: uncharacterized protein LOC100834217 [Brachypodium
distachyon]
Length = 479
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 62/82 (75%), Gaps = 2/82 (2%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RREKIS+RMK LQ+LVP NK T KA ML+EII Y++ LQ Q
Sbjct: 282 VRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNK-TDKASMLEEIIEYIKFLQLQ 340
Query: 342 VEFLSM-KLATVNPRMDLNMEA 362
+ LSM +L + + L M++
Sbjct: 341 TKVLSMSRLGATDALVPLLMDS 362
>gi|357153670|ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826168 [Brachypodium
distachyon]
Length = 458
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 53/64 (82%), Gaps = 2/64 (3%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKV--TGKAVMLDEIINYVQSLQ 339
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 238 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKWMQTDKASMLDEIIDYVKFLQ 297
Query: 340 RQVE 343
QV+
Sbjct: 298 LQVK 301
>gi|413937341|gb|AFW71892.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 425
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 64/100 (64%), Gaps = 9/100 (9%)
Query: 255 KQDENKSDSSKTKDNSKPVEPPKDYI--------HVRARRGQATDSHSLAERVRREKISE 306
+Q N++ T N+ P P + VRARRGQATD HS+AER+RREKIS+
Sbjct: 263 EQSSNEASGGGTGLNAPPFMVPANGAAGNGAPKPRVRARRGQATDPHSIAERLRREKISD 322
Query: 307 RMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 346
RMK LQ+LVP N+ T KA MLDEII YV+ LQ QV+ S
Sbjct: 323 RMKNLQELVPNSNR-TDKASMLDEIIEYVKFLQLQVKVRS 361
>gi|414885458|tpg|DAA61472.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 57/73 (78%), Gaps = 5/73 (6%)
Query: 275 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINY 334
PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LV NK T KA MLDEII+Y
Sbjct: 112 PPRQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANK-TDKASMLDEIIDY 168
Query: 335 VQSLQRQVEFLSM 347
V+ LQ QV LSM
Sbjct: 169 VKFLQLQV--LSM 179
>gi|414885459|tpg|DAA61473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 344
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 57/73 (78%), Gaps = 5/73 (6%)
Query: 275 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINY 334
PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LV NK T KA MLDEII+Y
Sbjct: 140 PPRQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANK-TDKASMLDEIIDY 196
Query: 335 VQSLQRQVEFLSM 347
V+ LQ QV LSM
Sbjct: 197 VKFLQLQV--LSM 207
>gi|449440508|ref|XP_004138026.1| PREDICTED: uncharacterized protein LOC101208544 [Cucumis sativus]
gi|449501436|ref|XP_004161366.1| PREDICTED: uncharacterized LOC101208544 [Cucumis sativus]
Length = 135
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 57/79 (72%), Gaps = 8/79 (10%)
Query: 308 MKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM-DLNM---EAL 363
MK LQ LVPGC+KVTGKA+MLDEIINYVQSLQ QVEFLSMKLA+++P + D M E L
Sbjct: 1 MKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLDPVLHDFGMDFPEVL 60
Query: 364 L----SKDLFQSCGYVQHS 378
L + ++ G V HS
Sbjct: 61 LVGTPASEILNGNGMVSHS 79
>gi|326533782|dbj|BAK05422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 287 GQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 346
GQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV+ LS
Sbjct: 169 GQATDPHSIAERLRRERIAERMKALQELVPSANK-TDKASMLDEIIDYVKFLQLQVKVLS 227
Query: 347 M 347
M
Sbjct: 228 M 228
>gi|307136009|gb|ADN33865.1| bHLH transcription factor [Cucumis melo subsp. melo]
Length = 135
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 56/79 (70%), Gaps = 8/79 (10%)
Query: 308 MKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM-DLNM---EAL 363
MK LQ LVPGC+KVTGKA MLDEIINYVQSLQ QVEFLSMKLA+++P + D M E L
Sbjct: 1 MKVLQTLVPGCHKVTGKASMLDEIINYVQSLQNQVEFLSMKLASLHPVLYDFGMDFPEVL 60
Query: 364 L----SKDLFQSCGYVQHS 378
+ + ++ G V HS
Sbjct: 61 IVGTPASEILNGNGMVSHS 79
>gi|242049278|ref|XP_002462383.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
gi|241925760|gb|EER98904.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
Length = 466
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 53/65 (81%), Gaps = 3/65 (4%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RA RGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV
Sbjct: 240 RAWRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQV 298
Query: 343 EFLSM 347
LSM
Sbjct: 299 --LSM 301
>gi|302801892|ref|XP_002982702.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
gi|300149801|gb|EFJ16455.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
Length = 443
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 287 GQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 346
GQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV+ LS
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNK-TDKASMLDEIIDYVKFLQLQVKVLS 322
Query: 347 M 347
M
Sbjct: 323 M 323
>gi|414865639|tpg|DAA44196.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 201
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/45 (82%), Positives = 42/45 (93%)
Query: 277 KDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKV 321
+DY+HVRA+RGQAT+SHSLAER RREKI+ERMK LQDLVPGCNK
Sbjct: 149 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKA 193
>gi|302798949|ref|XP_002981234.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
gi|300151288|gb|EFJ17935.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
Length = 443
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 287 GQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 346
GQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV+ LS
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNK-TDKASMLDEIIDYVKFLQLQVKVLS 322
Query: 347 M 347
M
Sbjct: 323 M 323
>gi|226493556|ref|NP_001141213.1| uncharacterized protein LOC100273300 [Zea mays]
gi|194703300|gb|ACF85734.1| unknown [Zea mays]
gi|223946721|gb|ACN27444.1| unknown [Zea mays]
Length = 154
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
Query: 308 MKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDL-NMEALLSK 366
M+ L++LVPGC+KV+G A++LDEIIN+VQSLQRQVE+LSM+LA VNPR+D +++ L+
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGGLDSFLTT 60
Query: 367 DLFQSCGY 374
+ + G+
Sbjct: 61 ECGRIAGF 68
>gi|255637743|gb|ACU19194.1| unknown [Glycine max]
Length = 156
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/49 (81%), Positives = 43/49 (87%)
Query: 308 MKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM 356
MK LQ LVPGC+KVTGKA++LDEIINYVQSLQ QVEFLSMKLA VNP
Sbjct: 1 MKTLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKLALVNPMF 49
>gi|51090923|dbj|BAD35528.1| basic helix-loop-helix protein-like [Oryza sativa Japonica Group]
gi|51090957|dbj|BAD35560.1| basic helix-loop-helix protein-like [Oryza sativa Japonica Group]
gi|215678579|dbj|BAG92234.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 154
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 52/68 (76%), Gaps = 3/68 (4%)
Query: 308 MKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKD 367
M+ L++LVPGC+KV+G A++LDEIIN+VQSLQRQVE+LSM+LA VNPR+D L
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGG---LDNF 57
Query: 368 LFQSCGYV 375
L CG +
Sbjct: 58 LTTECGRI 65
>gi|356527670|ref|XP_003532431.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 156
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/49 (81%), Positives = 43/49 (87%)
Query: 308 MKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM 356
MK LQ LVPGC+KVTGKA++LDEIINYVQSLQ QVEFLSMKLA VNP
Sbjct: 1 MKTLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKLALVNPMF 49
>gi|168048993|ref|XP_001776949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671650|gb|EDQ58198.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 66/109 (60%), Gaps = 12/109 (11%)
Query: 261 SDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNK 320
S S +DN+ P + RA+RG AT S+AERVRR KISERMK LQDLVP +K
Sbjct: 366 SSSPGVEDNTFHTVP----MRTRAKRGCATHPRSIAERVRRTKISERMKKLQDLVPSMDK 421
Query: 321 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLF 369
T + MLDE + YV+SLQRQV+ LS + + +EA ++ +F
Sbjct: 422 QTNTSDMLDETVEYVKSLQRQVQELSDTV--------VRLEAAAAQKIF 462
>gi|79324891|ref|NP_001031530.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|330255009|gb|AEC10103.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 233
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/43 (81%), Positives = 40/43 (93%)
Query: 279 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKV 321
Y+HVRARRGQATD+HSLAER RREKI+ RMK LQ+LVPGC+KV
Sbjct: 182 YVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKV 224
>gi|297820582|ref|XP_002878174.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324012|gb|EFH54433.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 439
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/44 (81%), Positives = 40/44 (90%)
Query: 279 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVT 322
Y+HVRARRGQATDSHSLAER RREKI+ RMK LQ+LVPGC+K T
Sbjct: 201 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGT 244
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 40/47 (85%)
Query: 321 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKD 367
+ G A++LDEIIN+VQSLQRQVE LSM+LA VNPR+D N++ +L+ +
Sbjct: 303 IQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDFNLDTILASE 349
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 24/204 (11%)
Query: 170 NMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPK 229
NM SS +++ + S P S+EG S S++ Q +S + + +++
Sbjct: 196 NMMSSKVEVKPTEVKPAEGSVPAELPEEMSQEGDSKSDRNCHQNFGESAIKGLEDVEK-- 253
Query: 230 AKETPPTSDPKVV---------AENPED--SNSMRSKQDENKSDSSKTKDNSKPVEPPKD 278
T++P V AE P D + +++ K + + ++D + K
Sbjct: 254 ------TTEPLVASSSVGSGNSAERPSDDPTENLKRKHRDTEESEGPSEDAEEESVGAKK 307
Query: 279 YIHVRA----RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINY 334
RA +RG+A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA MLDE I Y
Sbjct: 308 PASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEY 366
Query: 335 VQSLQRQVEFLSMKLATVNPRMDL 358
+++LQ QV+ +SM P M L
Sbjct: 367 LKTLQLQVQIMSMGAGMYMPSMML 390
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 24/204 (11%)
Query: 170 NMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPK 229
NM SS +++ + S P S+EG S S++ Q +S + + +++
Sbjct: 196 NMMSSKVEVKPTEVKPAEGSVPAELPEEMSQEGDSKSDRNCHQNFGESAIKGLEDVEK-- 253
Query: 230 AKETPPTSDPKVV---------AENPED--SNSMRSKQDENKSDSSKTKDNSKPVEPPKD 278
T++P V AE P D + +++ K + + ++D + K
Sbjct: 254 ------TTEPLVASSSVGSGNSAERPSDDPTENLKRKHRDTEESEGPSEDAEEESVGAKK 307
Query: 279 YIHVRA----RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINY 334
RA +RG+A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA MLDE I Y
Sbjct: 308 PASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEY 366
Query: 335 VQSLQRQVEFLSMKLATVNPRMDL 358
+++LQ QV+ +SM P M L
Sbjct: 367 LKTLQLQVQIMSMGAGMYMPSMML 390
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 24/204 (11%)
Query: 170 NMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPK 229
NM SS +++ + S P S+EG S S++ Q +S + + +++
Sbjct: 196 NMMSSKVEVKPTEVKPAEGSVPAELPEEMSQEGDSKSDRNCHQNFGESAIKGLEDVEK-- 253
Query: 230 AKETPPTSDPKVV---------AENPED--SNSMRSKQDENKSDSSKTKDNSKPVEPPKD 278
T++P V AE P D + +++ K + + ++D + K
Sbjct: 254 ------TTEPLVASSSVGSGNSAERPSDDPTENLKRKHRDTEESEGPSEDAEEESVGAKK 307
Query: 279 YIHVRA----RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINY 334
RA +RG+A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA MLDE I Y
Sbjct: 308 PASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEY 366
Query: 335 VQSLQRQVEFLSMKLATVNPRMDL 358
+++LQ QV+ +SM P M L
Sbjct: 367 LKTLQLQVQIMSMGAGIYMPSMML 390
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 24/204 (11%)
Query: 170 NMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPK 229
NM SS +++ + S P S+EG S S++ Q +S + + +++
Sbjct: 196 NMMSSKVEVKPTEVKPAEGSVPAELPEEMSQEGDSKSDRNCHQNFGESAIKGLEDVEK-- 253
Query: 230 AKETPPTSDPKVV---------AENPED--SNSMRSKQDENKSDSSKTKDNSKPVEPPKD 278
T++P V AE P D + +++ K + + ++D + K
Sbjct: 254 ------TTEPLVASSSVGSGNSAERPSDDPTENLKRKHRDTEESEGPSEDAEEESVGAKK 307
Query: 279 YIHVRA----RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINY 334
RA +RG+A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA MLDE I Y
Sbjct: 308 PASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEY 366
Query: 335 VQSLQRQVEFLSMKLATVNPRMDL 358
+++LQ QV+ +SM P M L
Sbjct: 367 LKTLQLQVQIMSMGAGMYMPSMML 390
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 24/204 (11%)
Query: 170 NMNSSVSASDSKKLRVSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPK 229
NM SS +++ + S P S+EG S S++ Q +S + + +++
Sbjct: 196 NMMSSKVEVKPTEVKPAEGSVPAELPEEMSQEGDSKSDRNCHQNFGESAIKGLEDVEK-- 253
Query: 230 AKETPPTSDPKVV---------AENPED--SNSMRSKQDENKSDSSKTKDNSKPVEPPKD 278
T++P V AE P D + +++ K + + ++D + K
Sbjct: 254 ------TTEPLVASSSVGSGNSAERPSDDPTENLKRKHRDTEESEGPSEDAEEESVGAKK 307
Query: 279 YIHVRA----RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINY 334
RA +RG+A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA MLDE I Y
Sbjct: 308 PASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEY 366
Query: 335 VQSLQRQVEFLSMKLATVNPRMDL 358
+++LQ QV+ +SM P M L
Sbjct: 367 LKTLQLQVQIMSMGAGMYMPSMML 390
>gi|242096368|ref|XP_002438674.1| hypothetical protein SORBIDRAFT_10g024110 [Sorghum bicolor]
gi|241916897|gb|EER90041.1| hypothetical protein SORBIDRAFT_10g024110 [Sorghum bicolor]
Length = 154
Score = 81.3 bits (199), Expect = 9e-13, Method: Composition-based stats.
Identities = 38/68 (55%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
Query: 308 MKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDL-NMEALLSK 366
M+ L++LVPGC+KV+G A++LDEIIN+VQSLQRQVE+LSM+LA VNPR+D +++ L+
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGGLDSFLTT 60
Query: 367 DLFQSCGY 374
+ + G+
Sbjct: 61 ECGRIAGF 68
>gi|195643094|gb|ACG41015.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 151
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 45/49 (91%)
Query: 308 MKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM 356
M+ LQ LVPGC+KVTGKA++LDEIINYVQSLQ QVEFLSM++A+++P +
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVL 49
>gi|168027605|ref|XP_001766320.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682534|gb|EDQ68952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 120
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 53/73 (72%)
Query: 280 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 339
+ RA+RG AT S+AERVRR KISERMK LQDLVP +K T + MLDE + YV+SLQ
Sbjct: 30 MRTRAKRGCATHPRSIAERVRRTKISERMKRLQDLVPNMDKQTNTSDMLDETVEYVKSLQ 89
Query: 340 RQVEFLSMKLATV 352
R+V+ LS +A +
Sbjct: 90 RKVQELSDTVARL 102
>gi|115477539|ref|NP_001062365.1| Os08g0536800 [Oryza sativa Japonica Group]
gi|38175541|dbj|BAD01234.1| bHLH transcription factor-like protein [Oryza sativa Japonica
Group]
gi|45736094|dbj|BAD13119.1| bHLH transcription factor-like protein [Oryza sativa Japonica
Group]
gi|113624334|dbj|BAF24279.1| Os08g0536800 [Oryza sativa Japonica Group]
Length = 143
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 45/49 (91%)
Query: 308 MKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM 356
M+ LQ LVPGC+KVTGKA++LDEIINYVQSLQ QVEFLSM++A+++P +
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVL 49
>gi|242094954|ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
Length = 447
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/59 (69%), Positives = 49/59 (83%), Gaps = 1/59 (1%)
Query: 289 ATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
ATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 220 ATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSM 277
>gi|255544792|ref|XP_002513457.1| DNA binding protein, putative [Ricinus communis]
gi|223547365|gb|EEF48860.1| DNA binding protein, putative [Ricinus communis]
Length = 418
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 49/65 (75%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISERM+ LQDLVP +K T + MLD ++Y++ LQRQ
Sbjct: 339 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQ 398
Query: 342 VEFLS 346
VE LS
Sbjct: 399 VETLS 403
>gi|356575289|ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 633
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 94/181 (51%), Gaps = 11/181 (6%)
Query: 185 VSRSSTPESNNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAE 244
V +++ P + SKE ++ +Q +Q + DS + + + ++ P + V +
Sbjct: 264 VEQNAVPSKQSEPASKESATKIDQTPNQVLGDSGTKGQTAAEK---SMEPAVASSSVCSG 320
Query: 245 NPEDSNS-------MRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAE 297
D S R +D + S+ ++++ + ++R +A + H+L+E
Sbjct: 321 TGADQGSDEPNQNLKRKTKDTDDSECHSEEESAGAKKTAGGQGGAGSKRSRAAEVHNLSE 380
Query: 298 RVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMD 357
R RR++I+E+M+ LQ+L+P CNKV KA MLDE I Y+++LQ QV+ +SM P M
Sbjct: 381 RRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQIMSMGAGLYMPPMM 439
Query: 358 L 358
L
Sbjct: 440 L 440
>gi|356557515|ref|XP_003547061.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 411
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 49/65 (75%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR KISERM+ LQDLVP +K T A MLD ++Y++ LQ+Q
Sbjct: 333 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQ 392
Query: 342 VEFLS 346
V+ LS
Sbjct: 393 VQTLS 397
>gi|414876673|tpg|DAA53804.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 310
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 69/118 (58%), Gaps = 13/118 (11%)
Query: 320 KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLN-MEALLSKDLFQSCGYVQHS 378
+V G AVML EIINYVQSLQRQVEF+SMKLATVNP++DLN + +L KD SCG S
Sbjct: 183 QVVGNAVMLGEIINYVQSLQRQVEFMSMKLATVNPQVDLNSLPNVLPKD---SCGPPHFS 239
Query: 379 LYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPING 436
L S+ QP GS L +NQ ++ L+++ N+Q +NG
Sbjct: 240 LETSGASLSYLS---QPHHGSPLGC------MDNQSCMHPLDTTFCLAINLQYHFLNG 288
>gi|168056355|ref|XP_001780186.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668419|gb|EDQ55027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 144
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 51/72 (70%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA RG AT S+AERVRR KISERMK LQDLVP ++ T A MLD+ + YV+ LQ+Q
Sbjct: 63 IRANRGHATHPRSIAERVRRGKISERMKKLQDLVPSMDRQTNTADMLDDAVEYVKQLQQQ 122
Query: 342 VEFLSMKLATVN 353
V+ LS +A +
Sbjct: 123 VQELSKTVAELQ 134
>gi|356544541|ref|XP_003540708.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 415
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 47/65 (72%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR KISERM+ LQDLVP +K T A MLD + Y++ LQ Q
Sbjct: 337 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQNQ 396
Query: 342 VEFLS 346
VE LS
Sbjct: 397 VEALS 401
>gi|357441953|ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3 [Medicago truncatula]
Length = 721
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA MLDE I Y+++LQ QV+
Sbjct: 464 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 522
Query: 344 FLSMKLATVNPRMDL 358
+SM P+M L
Sbjct: 523 MMSMGAGLYMPQMML 537
>gi|356550347|ref|XP_003543549.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 408
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 49/65 (75%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR KISERM+ LQDLVP +K T A MLD ++Y++ LQ+Q
Sbjct: 330 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQ 389
Query: 342 VEFLS 346
V+ LS
Sbjct: 390 VQTLS 394
>gi|255543048|ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical protein [Ricinus communis]
Length = 758
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA MLDE I Y+++LQ QV+
Sbjct: 461 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 519
Query: 344 FLSMKLATVNPRMDL 358
+SM P M L
Sbjct: 520 IMSMGAGLYMPSMML 534
>gi|224124534|ref|XP_002330047.1| predicted protein [Populus trichocarpa]
gi|222871472|gb|EEF08603.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA MLDE I Y+++LQ QV+
Sbjct: 453 SKRNRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 511
Query: 344 FLSMKLATVNPRMDL 358
+SM P M L
Sbjct: 512 IMSMGAGLYMPSMML 526
>gi|356538931|ref|XP_003537954.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 418
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR KISERM+ LQDLVP +K T A MLD + Y++ LQ Q
Sbjct: 340 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQNQ 399
Query: 342 VEFLS 346
V+ LS
Sbjct: 400 VQTLS 404
>gi|356534971|ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 665
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA MLDE I Y+++LQ QV+
Sbjct: 431 SKRSRAAEVHNLSERKRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 489
Query: 344 FLSMKLATVNPRMDL 358
+SM P M L
Sbjct: 490 IMSMGAGLYMPPMML 504
>gi|357444375|ref|XP_003592465.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355481513|gb|AES62716.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 433
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR KISERM+ LQDLVP +K T + MLD + Y++ LQ Q
Sbjct: 355 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTSDMLDLAVEYIKDLQNQ 414
Query: 342 VEFLS 346
VE LS
Sbjct: 415 VETLS 419
>gi|296089857|emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA MLDE I Y+++LQ QV+
Sbjct: 322 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 380
Query: 344 FLSMKLATVNPRMDL 358
+SM P M L
Sbjct: 381 IMSMGTGLCMPPMML 395
>gi|147770956|emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 107/234 (45%), Gaps = 39/234 (16%)
Query: 161 LSCFAGSQMNMNSSVSASDSKKLRVSRSSTPESNNNADS-----KEGSSLSEQITSQTVT 215
+ AG + + + D + SR+ P + + DS K+ S SE +
Sbjct: 286 IGAIAGPSSSSKDRIGSKDKQPAASSRN--PAESRHVDSSCGLQKDVDSHSEPVMVPASV 343
Query: 216 DSNPRKRKSIQRPKAKETPPTSDPKVVAEN-PEDSNSM----------------RSKQDE 258
D P K+++ P E P P+ A+ P+ S+ R+ D
Sbjct: 344 DLKPVVAKTMEEPLPAEQSPVHLPRRTAKGIPDGEKSIEPAVACSSVCSGNSVERASNDP 403
Query: 259 NKSDSSKTKDNSKPVEPPKDY----IHVR----------ARRGQATDSHSLAERVRREKI 304
+ K +D + P +D + VR ++R +A + H+L+ER RR++I
Sbjct: 404 KHNLKRKCRDTEESECPSEDVEEESVGVRKSAPAKGGTGSKRSRAAEVHNLSERRRRDRI 463
Query: 305 SERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDL 358
+E+M+ LQ+L+P CNKV KA MLDE I Y+++LQ QV+ +SM P M L
Sbjct: 464 NEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQIMSMGTGLCMPPMML 516
>gi|359487706|ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA MLDE I Y+++LQ QV+
Sbjct: 458 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 516
Query: 344 FLSMKLATVNPRMDL 358
+SM P M L
Sbjct: 517 IMSMGTGLCMPPMML 531
>gi|414876674|tpg|DAA53805.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 149
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 69/118 (58%), Gaps = 13/118 (11%)
Query: 320 KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLN-MEALLSKDLFQSCGYVQHS 378
+V G AVML EIINYVQSLQRQVEF+SMKLATVNP++DLN + +L KD SCG S
Sbjct: 33 QVVGNAVMLGEIINYVQSLQRQVEFMSMKLATVNPQVDLNSLPNVLPKD---SCGPPHFS 89
Query: 379 LYPGDCSVQTFPSRYQPQQGSHLTSSGINNNAENQFSINALNSSLHRNHNIQLPPING 436
L S+ QP GS L +NQ ++ L+++ N+Q +NG
Sbjct: 90 LETSGASLSYLS---QPHHGSPLGC------MDNQSCMHPLDTTFCLAINLQYHFLNG 138
>gi|449454115|ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
Length = 696
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA MLDE I Y+++LQ QV+
Sbjct: 458 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 516
Query: 344 FLSMKLATVNPRM 356
+SM P M
Sbjct: 517 IMSMGAGLFMPPM 529
>gi|225437207|ref|XP_002281626.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297735488|emb|CBI17928.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 75/115 (65%), Gaps = 13/115 (11%)
Query: 245 NPEDSNS----MRSKQDENKSDSSKTKDNSKPVE--------PPKDYIHVRARRGQATDS 292
PED++ R + + ++ + K + +P++ PP VRARRGQATD
Sbjct: 78 KPEDASGSGKRFREEVIDGRASTVKNAFHGQPMQATVAAAPHPPAIRPRVRARRGQATDP 137
Query: 293 HSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 138 HSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 191
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
A+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 304 AKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 362
Query: 344 FLSMKLATV 352
+SM + V
Sbjct: 363 MMSMGCSMV 371
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
A+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 266 AKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 324
Query: 344 FLSMKLATV 352
+SM + V
Sbjct: 325 MMSMGCSMV 333
>gi|223702400|gb|ACN21631.1| putative basic helix-loop-helix protein BHLH4 [Lotus japonicus]
Length = 275
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +AVMLDEI++
Sbjct: 115 HPPPMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAVMLDEIVD 173
Query: 334 YVQSLQRQVEFLSM 347
YV+ L+ QV+ LSM
Sbjct: 174 YVKFLRLQVKVLSM 187
>gi|168056250|ref|XP_001780134.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668446|gb|EDQ55053.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 50/71 (70%)
Query: 280 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 339
+ RA+RG AT S+AERVRR +ISERMK LQDLVP K T + MLDE + YV+SLQ
Sbjct: 1 MRARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTSDMLDETVEYVKSLQ 60
Query: 340 RQVEFLSMKLA 350
+V+ L+ +A
Sbjct: 61 MKVKELTETIA 71
>gi|224075772|ref|XP_002304761.1| predicted protein [Populus trichocarpa]
gi|222842193|gb|EEE79740.1| predicted protein [Populus trichocarpa]
Length = 422
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISERM+ LQDLVP +K T + MLD ++Y++ LQRQ
Sbjct: 344 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQ 403
Query: 342 VEFLS 346
+ LS
Sbjct: 404 FKALS 408
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA MLDE I Y++SLQ QV+
Sbjct: 329 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQVQ 387
Query: 344 FLSMKLATV 352
+ M A +
Sbjct: 388 MMWMGSAGI 396
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA MLDE I Y++SLQ QV+
Sbjct: 329 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQVQ 387
Query: 344 FLSMKLATV 352
+ M A +
Sbjct: 388 MMWMGSAGI 396
>gi|357440517|ref|XP_003590536.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479584|gb|AES60787.1| Transcription factor UNE12 [Medicago truncatula]
Length = 282
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
+PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++
Sbjct: 112 QPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVD 170
Query: 334 YVQSLQRQVEFLSM 347
YV+ L+ QV+ LSM
Sbjct: 171 YVKFLRLQVKVLSM 184
>gi|357440519|ref|XP_003590537.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479585|gb|AES60788.1| Transcription factor UNE12 [Medicago truncatula]
Length = 285
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
+PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++
Sbjct: 115 QPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVD 173
Query: 334 YVQSLQRQVEFLSM 347
YV+ L+ QV+ LSM
Sbjct: 174 YVKFLRLQVKVLSM 187
>gi|356500459|ref|XP_003519049.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 378
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD + Y++ LQ+Q
Sbjct: 294 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPHMDKQTNTADMLDLAVEYIKDLQKQ 353
Query: 342 VEFLSMKLATVN----PRMDLNMEA 362
+ LS K A P+ D N A
Sbjct: 354 FKTLSEKRANCKCISMPKADTNQIA 378
>gi|168040637|ref|XP_001772800.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675877|gb|EDQ62367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 50/71 (70%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA RG AT S+AERVRR KISERMK LQ+LVP ++ T A MLD+ + YV+ LQ Q
Sbjct: 379 LRANRGHATHPRSIAERVRRGKISERMKKLQELVPNSDRQTNTADMLDDAVEYVKQLQLQ 438
Query: 342 VEFLSMKLATV 352
V+ L+ +A +
Sbjct: 439 VQELTNTVAEL 449
>gi|108710019|gb|ABF97814.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 481
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 66/103 (64%), Gaps = 3/103 (2%)
Query: 254 SKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQD 313
++ E+ S+ ++++ + +PP ARR +A + H+L+ER RR++I+E+M+ LQ+
Sbjct: 286 TEDSESPSEDAESESAALARKPPAKM--TTARRSRAAEVHNLSERRRRDRINEKMRALQE 343
Query: 314 LVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM 356
L+P CNK T KA MLDE I Y++SLQ Q++ + M P M
Sbjct: 344 LIPHCNK-TDKASMLDEAIEYLKSLQLQLQMMWMGSGMAPPVM 385
>gi|356572238|ref|XP_003554277.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++
Sbjct: 122 HPPAIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVD 180
Query: 334 YVQSLQRQVEFLSM 347
YV+ L+ QV+ LSM
Sbjct: 181 YVKFLRLQVKVLSM 194
>gi|357454359|ref|XP_003597460.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486508|gb|AES67711.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 412
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%)
Query: 280 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 339
+ +RA+RG AT S+AERVRR KISERM+ LQDLVP +K T A MLD ++Y++ LQ
Sbjct: 330 MKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQ 389
Query: 340 RQVEFL 345
+Q + L
Sbjct: 390 KQAQKL 395
>gi|168012170|ref|XP_001758775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689912|gb|EDQ76281.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 95
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 46/64 (71%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RARRG AT S+AER RR +ISERMK LQDLVP +K T A MLDE + YV+ LQ QV
Sbjct: 16 RARRGYATHPRSIAERNRRSRISERMKKLQDLVPNMDKQTNTADMLDEAVEYVKHLQTQV 75
Query: 343 EFLS 346
+ LS
Sbjct: 76 KDLS 79
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA MLDE I Y++SLQ QV+
Sbjct: 324 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQVQ 382
Query: 344 FLSMKLATVNP 354
+ M P
Sbjct: 383 MMWMGSGIAAP 393
>gi|108710018|gb|ABF97813.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 485
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 66/103 (64%), Gaps = 3/103 (2%)
Query: 254 SKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQD 313
++ E+ S+ ++++ + +PP ARR +A + H+L+ER RR++I+E+M+ LQ+
Sbjct: 286 TEDSESPSEDAESESAALARKPPAKM--TTARRSRAAEVHNLSERRRRDRINEKMRALQE 343
Query: 314 LVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM 356
L+P CNK T KA MLDE I Y++SLQ Q++ + M P M
Sbjct: 344 LIPHCNK-TDKASMLDEAIEYLKSLQLQLQMMWMGSGMAPPVM 385
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 52/70 (74%), Gaps = 4/70 (5%)
Query: 281 HVRA---RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQS 337
H R +R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA MLDE I Y+++
Sbjct: 445 HARGMGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKT 503
Query: 338 LQRQVEFLSM 347
LQ QV+ +SM
Sbjct: 504 LQLQVQMMSM 513
>gi|224066311|ref|XP_002302077.1| predicted protein [Populus trichocarpa]
gi|222843803|gb|EEE81350.1| predicted protein [Populus trichocarpa]
Length = 300
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
Query: 275 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINY 334
PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++Y
Sbjct: 131 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDY 189
Query: 335 VQSLQRQVEFLSM 347
V+ L+ QV+ LSM
Sbjct: 190 VKFLRLQVKILSM 202
>gi|449437603|ref|XP_004136581.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449522885|ref|XP_004168456.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 366
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISERM+ LQDLVP +K T A MLD ++Y++ LQ+Q
Sbjct: 282 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKELQKQ 341
Query: 342 VEFLS 346
+ LS
Sbjct: 342 FKTLS 346
>gi|357115750|ref|XP_003559649.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 445
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
ARR +A + H+L+ER RR++I+E+MK LQ+L+P CNK T KA MLDE I Y+++LQ QV+
Sbjct: 262 ARRSRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKTLQMQVQ 320
Query: 344 FLSMKLATVNP 354
+ M P
Sbjct: 321 MMWMGSGMAPP 331
>gi|356545930|ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 476
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 260 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQM 318
Query: 345 LSMKLATV 352
+SM V
Sbjct: 319 MSMGYGMV 326
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 67/104 (64%), Gaps = 3/104 (2%)
Query: 251 SMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKF 310
+ ++ E+ S+ ++++ + +PP+ ARR +A + H+L+ER RR++I+E+M+
Sbjct: 280 GLDTEDSESPSEDAESESLALDRKPPQKL--TTARRSRAAEVHNLSERRRRDRINEKMRA 337
Query: 311 LQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 354
LQ+L+P CNK T KA MLDE I Y+++LQ QV+ + M P
Sbjct: 338 LQELIPHCNK-TDKASMLDEAIEYLKTLQMQVQMMWMGGGMAAP 380
>gi|356504971|ref|XP_003521266.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++
Sbjct: 122 HPPAIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVD 180
Query: 334 YVQSLQRQVEFLSM 347
YV+ L+ QV+ LSM
Sbjct: 181 YVKFLRLQVKVLSM 194
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 59/89 (66%), Gaps = 5/89 (5%)
Query: 257 DENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVP 316
D S K+ + SKPV PP+ ++R +A + H+L+E+ RR +I+E+MK LQ+L+P
Sbjct: 98 DFTSSHVEKSVEASKPVPPPRS----SSKRSRAAEFHNLSEKRRRSRINEKMKALQNLIP 153
Query: 317 GCNKVTGKAVMLDEIINYVQSLQRQVEFL 345
NK T KA MLDE I Y++ LQ QV++L
Sbjct: 154 NSNK-TDKASMLDEAIEYLKQLQLQVQYL 181
>gi|356537351|ref|XP_003537191.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 384
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 49/69 (71%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD + Y++ LQ+Q
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 359
Query: 342 VEFLSMKLA 350
+ LS K A
Sbjct: 360 FKTLSEKRA 368
>gi|255559915|ref|XP_002520976.1| DNA binding protein, putative [Ricinus communis]
gi|223539813|gb|EEF41393.1| DNA binding protein, putative [Ricinus communis]
Length = 299
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++
Sbjct: 129 HPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVD 187
Query: 334 YVQSLQRQVEFLSM 347
YV+ L+ QV+ LSM
Sbjct: 188 YVKFLRLQVKVLSM 201
>gi|356505096|ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 517
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK + KA MLDE I+Y++SLQ QV+
Sbjct: 305 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAISYLKSLQLQVQM 363
Query: 345 LSMKLATV 352
+SM V
Sbjct: 364 MSMGCGMV 371
>gi|125545009|gb|EAY91148.1| hypothetical protein OsI_12756 [Oryza sativa Indica Group]
Length = 469
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 66/103 (64%), Gaps = 3/103 (2%)
Query: 254 SKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQD 313
++ E+ S+ ++++ + +PP ARR +A + H+L+ER RR++I+E+M+ LQ+
Sbjct: 267 TEDSESPSEDAESESAALARKPPAKM--TTARRSRAAEVHNLSERRRRDRINEKMRALQE 324
Query: 314 LVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM 356
L+P CNK T KA MLDE I Y++SLQ Q++ + M P M
Sbjct: 325 LIPHCNK-TDKASMLDEAIEYLKSLQLQLQMMWMGSGMAPPVM 366
>gi|223702398|gb|ACN21630.1| putative basic helix-loop-helix protein BHLH3 [Lotus japonicus]
Length = 297
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++
Sbjct: 127 HPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVD 185
Query: 334 YVQSLQRQVEFLSM 347
YV+ L+ QV+ LSM
Sbjct: 186 YVKFLRLQVKVLSM 199
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK + KA MLDE I Y++SLQ Q++
Sbjct: 281 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQM 339
Query: 345 LSM 347
+SM
Sbjct: 340 MSM 342
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK + KA MLDE I Y++SLQ Q++
Sbjct: 281 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQM 339
Query: 345 LSM 347
+SM
Sbjct: 340 MSM 342
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK + KA MLDE I Y++SLQ Q++
Sbjct: 210 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQM 268
Query: 345 LSM 347
+SM
Sbjct: 269 MSM 271
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK + KA MLDE I Y++SLQ Q++
Sbjct: 210 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQM 268
Query: 345 LSM 347
+SM
Sbjct: 269 MSM 271
>gi|449442685|ref|XP_004139111.1| PREDICTED: transcription factor bHLH122-like [Cucumis sativus]
Length = 437
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR KISERM+ LQ+LVP +K T + MLD + Y++ LQ+Q
Sbjct: 359 LRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQKQ 418
Query: 342 VEFLS 346
V+ LS
Sbjct: 419 VQTLS 423
>gi|449458442|ref|XP_004146956.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
gi|449503810|ref|XP_004162188.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 316
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++
Sbjct: 146 HPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVD 204
Query: 334 YVQSLQRQVEFLSM 347
YV+ L+ QV+ LSM
Sbjct: 205 YVKFLRLQVKVLSM 218
>gi|449526183|ref|XP_004170093.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH122-like
[Cucumis sativus]
Length = 437
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR KISERM+ LQ+LVP +K T + MLD + Y++ LQ+Q
Sbjct: 359 LRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQKQ 418
Query: 342 VEFLS 346
V+ LS
Sbjct: 419 VQTLS 423
>gi|238008194|gb|ACR35132.1| unknown [Zea mays]
gi|413946840|gb|AFW79489.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 638
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
A+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 380 AKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQ 438
Query: 344 FLSMKLATVNPRMDL 358
+SM P M L
Sbjct: 439 MMSMGSGLCIPPMLL 453
>gi|255563356|ref|XP_002522681.1| hypothetical protein RCOM_0886600 [Ricinus communis]
gi|223538157|gb|EEF39768.1| hypothetical protein RCOM_0886600 [Ricinus communis]
Length = 77
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 39/46 (84%)
Query: 327 MLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKDLFQSC 372
MLDEIINYVQSLQRQVEFLSMKLA VNPR+D N+ L++K+ F C
Sbjct: 1 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNINNLIAKETFPPC 46
>gi|356536868|ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 491
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+R A + H+L+ER RR++I+E+MK LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 273 KRSHAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQM 331
Query: 345 LSMKLATV 352
+SM V
Sbjct: 332 MSMGCGMV 339
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 64/97 (65%), Gaps = 3/97 (3%)
Query: 258 ENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPG 317
E+ S+ ++++ + +PP+ ARR +A + H+L+ER RR++I+E+M+ LQ+L+P
Sbjct: 8 ESPSEDAESESLALDRKPPQKL--TTARRSRAAEVHNLSERRRRDRINEKMRALQELIPH 65
Query: 318 CNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 354
CNK T KA MLDE I Y+++LQ QV+ + M P
Sbjct: 66 CNK-TDKASMLDEAIEYLKTLQMQVQMMWMGGGMAAP 101
>gi|297746360|emb|CBI16416.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 49/65 (75%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 219 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 278
Query: 342 VEFLS 346
V+ LS
Sbjct: 279 VKTLS 283
>gi|374412422|gb|AEZ49169.1| helix-loop-helix DNA-binding domain containing protein [Wolffia
australiana]
Length = 368
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 51/63 (80%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+R ++++ H+L+ER RR++I+E+M+ LQ+LVP CNK KA ML+E+I Y++SLQ QV+
Sbjct: 217 KRSRSSEVHNLSERRRRDRINEKMRALQELVPCCNKQVDKASMLEEVIEYLKSLQMQVQA 276
Query: 345 LSM 347
+SM
Sbjct: 277 MSM 279
>gi|312282767|dbj|BAJ34249.1| unnamed protein product [Thellungiella halophila]
Length = 363
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T + MLD ++Y++ LQRQ
Sbjct: 285 VRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 344
Query: 342 VEFL 345
+ L
Sbjct: 345 YKIL 348
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK + KA MLDE I Y++SLQ Q++
Sbjct: 289 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQ 347
Query: 344 FLSM 347
+SM
Sbjct: 348 VMSM 351
>gi|6166283|gb|AAF04760.1|AF103808_1 helix-loop-helix protein 1A [Pinus taeda]
Length = 551
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVT-GKAVMLDEIINYVQSLQR 340
VRA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLDE + YV+SLQ+
Sbjct: 468 VRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNSDKQTVNIADMLDEAVEYVKSLQK 527
Query: 341 QVEFLS 346
QV+ L+
Sbjct: 528 QVQELA 533
>gi|238015240|gb|ACR38655.1| unknown [Zea mays]
Length = 435
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
A+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 177 AKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQ 235
Query: 344 FLSMKLATVNPRMDL 358
+SM P M L
Sbjct: 236 MMSMGSGLCIPPMLL 250
>gi|414873163|tpg|DAA51720.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 523
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 69/108 (63%), Gaps = 9/108 (8%)
Query: 246 PEDSNSMRSKQDENKSDS------SKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERV 299
P DS ++ ++ + DS ++ ++ S+ +P + Y RR +A + H+L+ER
Sbjct: 278 PSDSVHVQKRKGRCRDDSDSPSEDAECEEASEETKPSRRY--GTKRRTRAAEVHNLSERR 335
Query: 300 RREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
RR++I+E+M+ LQ+L+P CNK T KA +LDE I Y++SLQ QV+ + M
Sbjct: 336 RRDRINEKMRALQELIPHCNK-TDKASILDETIEYLKSLQMQVQIMWM 382
>gi|224145129|ref|XP_002325537.1| predicted protein [Populus trichocarpa]
gi|222862412|gb|EEE99918.1| predicted protein [Populus trichocarpa]
Length = 246
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 281 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 340
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A MLDE + YV+ LQR
Sbjct: 169 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEALAYVKFLQR 228
Query: 341 QVEFLS 346
Q++ L+
Sbjct: 229 QIQELT 234
>gi|388517565|gb|AFK46844.1| unknown [Medicago truncatula]
Length = 194
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A MLDE + YV+ LQ Q
Sbjct: 118 IRAKRGFATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKFLQNQ 177
Query: 342 VEFLS 346
+E LS
Sbjct: 178 IEELS 182
>gi|255544250|ref|XP_002513187.1| DNA binding protein, putative [Ricinus communis]
gi|223547685|gb|EEF49178.1| DNA binding protein, putative [Ricinus communis]
Length = 432
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISERM+ LQDL P +K T A MLD + Y++ LQ+Q
Sbjct: 350 IRAKRGFATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTADMLDLAVEYIKDLQKQ 409
Query: 342 VEFL 345
V+ L
Sbjct: 410 VKTL 413
>gi|15217533|ref|NP_172424.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|30681206|ref|NP_849626.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|20532207|sp|O80536.1|PIF3_ARATH RecName: Full=Transcription factor PIF3; AltName: Full=Basic
helix-loop-helix protein 8; Short=AtbHLH8; Short=bHLH 8;
AltName: Full=Phytochrome-associated protein 3; AltName:
Full=Phytochrome-interacting factor 3; AltName:
Full=Transcription factor EN 100; AltName: Full=bHLH
transcription factor bHLH008
gi|18026964|gb|AAL55715.1|AF251693_1 putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|3482928|gb|AAC33213.1| Unknown protein [Arabidopsis thaliana]
gi|3929586|gb|AAC95156.1| phytochrome interacting factor 3 [Arabidopsis thaliana]
gi|26449609|dbj|BAC41930.1| putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|332190336|gb|AEE28457.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|332190337|gb|AEE28458.1| transcription factor PIF3 [Arabidopsis thaliana]
Length = 524
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R ++ + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA MLDE I Y++SLQ QV+
Sbjct: 339 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKSLQLQVQ 397
Query: 344 FLSM 347
+SM
Sbjct: 398 IMSM 401
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
gi|222844816|gb|EEE82363.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 363 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 421
Query: 344 FLSMKLATV 352
+SM + V
Sbjct: 422 MMSMGCSMV 430
>gi|356504823|ref|XP_003521194.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 387
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 50/69 (72%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISER++ LQ+LVP +K T A MLD ++Y++ LQ+Q
Sbjct: 303 IRAKRGFATHPRSIAERVRRTRISERIRKLQELVPTMDKQTSTAEMLDLALDYIKDLQKQ 362
Query: 342 VEFLSMKLA 350
+ LS K A
Sbjct: 363 FKTLSDKRA 371
>gi|224053374|ref|XP_002297788.1| predicted protein [Populus trichocarpa]
gi|222845046|gb|EEE82593.1| predicted protein [Populus trichocarpa]
Length = 111
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 48/64 (75%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RA+RG AT S+AERVRR +ISERM+ LQDLVP +K T + MLD ++Y++ LQRQV
Sbjct: 33 RAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQV 92
Query: 343 EFLS 346
+ LS
Sbjct: 93 QTLS 96
>gi|56784181|dbj|BAD81566.1| putative BP-5 protein [Oryza sativa Japonica Group]
Length = 565
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 309 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 367
Query: 345 LSMKLATVNPRMDL 358
+SM P M L
Sbjct: 368 MSMGTGLCIPPMLL 381
>gi|224136007|ref|XP_002327358.1| predicted protein [Populus trichocarpa]
gi|222835728|gb|EEE74163.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 50/65 (76%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E ++YV+ LQRQ
Sbjct: 188 IRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVDYVKFLQRQ 247
Query: 342 VEFLS 346
++ L+
Sbjct: 248 IQELT 252
>gi|297827895|ref|XP_002881830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327669|gb|EFH58089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 359
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T + MLD ++Y++ LQRQ
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338
Query: 342 VEFL 345
+ L
Sbjct: 339 YKIL 342
>gi|449443927|ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 529
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK T KA MLDE I Y+++LQ QV+
Sbjct: 313 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-TDKASMLDEAIEYLKTLQLQVQM 371
Query: 345 LSM 347
+SM
Sbjct: 372 MSM 374
>gi|42569863|ref|NP_181757.2| transcription factor bHLH130 [Arabidopsis thaliana]
gi|75288858|sp|Q66GR3.1|BH130_ARATH RecName: Full=Transcription factor bHLH130; AltName: Full=Basic
helix-loop-helix protein 130; Short=AtbHLH130;
Short=bHLH 130; AltName: Full=Transcription factor EN
69; AltName: Full=bHLH transcription factor bHLH130
gi|51536448|gb|AAU05462.1| At2g42280 [Arabidopsis thaliana]
gi|52421281|gb|AAU45210.1| At2g42280 [Arabidopsis thaliana]
gi|110737862|dbj|BAF00869.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|330255005|gb|AEC10099.1| transcription factor bHLH130 [Arabidopsis thaliana]
Length = 359
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T + MLD ++Y++ LQRQ
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338
Query: 342 VEFL 345
+ L
Sbjct: 339 YKIL 342
>gi|297596562|ref|NP_001042775.2| Os01g0286100 [Oryza sativa Japonica Group]
gi|215717101|dbj|BAG95464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673123|dbj|BAF04689.2| Os01g0286100 [Oryza sativa Japonica Group]
Length = 637
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 381 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 439
Query: 345 LSMKLATVNPRMDL 358
+SM P M L
Sbjct: 440 MSMGTGLCIPPMLL 453
>gi|297843750|ref|XP_002889756.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
gi|297335598|gb|EFH66015.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R ++ + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA MLDE I Y++SLQ QV+
Sbjct: 337 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKSLQLQVQ 395
Query: 344 FLSM 347
+SM
Sbjct: 396 IMSM 399
>gi|2673918|gb|AAB88652.1| unknown protein [Arabidopsis thaliana]
Length = 380
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T + MLD ++Y++ LQRQ
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 359
Query: 342 VEFL 345
+ L
Sbjct: 360 YKIL 363
>gi|255560265|ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
gi|223539719|gb|EEF41301.1| Phytochrome-interacting factor, putative [Ricinus communis]
Length = 572
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 357 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQM 415
Query: 345 LSMKLATV 352
+SM + V
Sbjct: 416 MSMGCSMV 423
>gi|226529517|ref|NP_001151233.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|195645224|gb|ACG42080.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|414886017|tpg|DAA62031.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 408
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR KISER++ LQ+LVP K T A MLD ++Y++ LQ+Q
Sbjct: 325 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQKQ 384
Query: 342 VEFL 345
V+ L
Sbjct: 385 VKVL 388
>gi|18403381|ref|NP_564583.1| transcription factor bHLH122 [Arabidopsis thaliana]
gi|75308807|sp|Q9C690.1|BH122_ARATH RecName: Full=Transcription factor bHLH122; AltName: Full=Basic
helix-loop-helix protein 122; Short=AtbHLH122;
Short=bHLH 122; AltName: Full=Transcription factor EN
70; AltName: Full=bHLH transcription factor bHLH122
gi|12320788|gb|AAG50543.1|AC079828_14 unknown protein [Arabidopsis thaliana]
gi|14334500|gb|AAK59447.1| unknown protein [Arabidopsis thaliana]
gi|17104811|gb|AAL34294.1| unknown protein [Arabidopsis thaliana]
gi|332194505|gb|AEE32626.1| transcription factor bHLH122 [Arabidopsis thaliana]
Length = 379
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 45/64 (70%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR KISERM+ LQDLVP + T A MLD + Y++ LQ Q
Sbjct: 304 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 363
Query: 342 VEFL 345
V+ L
Sbjct: 364 VKAL 367
>gi|351722090|ref|NP_001236464.1| uncharacterized protein LOC100527723 [Glycine max]
gi|255633050|gb|ACU16880.1| unknown [Glycine max]
Length = 157
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 49/65 (75%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A MLDE + YV+ LQ+Q
Sbjct: 81 VRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVAYVKFLQKQ 140
Query: 342 VEFLS 346
+E LS
Sbjct: 141 IEELS 145
>gi|218188008|gb|EEC70435.1| hypothetical protein OsI_01449 [Oryza sativa Indica Group]
Length = 693
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 437 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 495
Query: 345 LSMKLATVNPRMDL 358
+SM P M L
Sbjct: 496 MSMGTGLCIPPMLL 509
>gi|297852830|ref|XP_002894296.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297340138|gb|EFH70555.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 45/64 (70%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR KISERM+ LQDLVP + T A MLD + Y++ LQ Q
Sbjct: 303 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 362
Query: 342 VEFL 345
V+ L
Sbjct: 363 VKTL 366
>gi|312281971|dbj|BAJ33851.1| unnamed protein product [Thellungiella halophila]
Length = 310
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Query: 270 SKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLD 329
S P +P VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+D
Sbjct: 134 SAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMID 192
Query: 330 EIINYVQSLQRQVEFLSM 347
EI++YV+ L+ QV+ LSM
Sbjct: 193 EIVDYVKFLRLQVKVLSM 210
>gi|357509821|ref|XP_003625199.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355500214|gb|AES81417.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 319
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 51/74 (68%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT SLAERVRR +ISERM+ LQ++VP +K T + MLD + Y++ LQ+Q
Sbjct: 243 IRAKRGFATHPRSLAERVRRTRISERMRKLQEIVPNIDKQTCTSEMLDLAVEYIKDLQKQ 302
Query: 342 VEFLSMKLATVNPR 355
++ +S K A R
Sbjct: 303 LKTMSAKRAKCRCR 316
>gi|222618221|gb|EEE54353.1| hypothetical protein OsJ_01348 [Oryza sativa Japonica Group]
Length = 705
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 449 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 507
Query: 345 LSMKLATVNPRMDL 358
+SM P M L
Sbjct: 508 MSMGTGLCIPPMLL 521
>gi|20127058|gb|AAM10948.1|AF488592_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Query: 270 SKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLD 329
S P +P VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+D
Sbjct: 134 SAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMID 192
Query: 330 EIINYVQSLQRQVEFLSM 347
EI++YV+ L+ QV+ LSM
Sbjct: 193 EIVDYVKFLRLQVKVLSM 210
>gi|449468728|ref|XP_004152073.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 553
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA MLDE I Y+++LQ QV+
Sbjct: 302 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKA-DKASMLDEAIEYLKTLQLQVQM 360
Query: 345 LSMKLATV 352
+SM V
Sbjct: 361 MSMGCGMV 368
>gi|255583282|ref|XP_002532405.1| DNA binding protein, putative [Ricinus communis]
gi|223527901|gb|EEF29990.1| DNA binding protein, putative [Ricinus communis]
Length = 355
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ+Q
Sbjct: 271 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 330
Query: 342 VEFLS 346
+ LS
Sbjct: 331 YKTLS 335
>gi|297809891|ref|XP_002872829.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
gi|297318666|gb|EFH49088.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Query: 270 SKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLD 329
S P +P VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+D
Sbjct: 134 SAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMID 192
Query: 330 EIINYVQSLQRQVEFLSM 347
EI++YV+ L+ QV+ LSM
Sbjct: 193 EIVDYVKFLRLQVKVLSM 210
>gi|414590533|tpg|DAA41104.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 367
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR KISER++ LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 285 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQKQ 344
Query: 342 VEFL 345
V+ L
Sbjct: 345 VKVL 348
>gi|297809111|ref|XP_002872439.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318276|gb|EFH48698.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 49/67 (73%)
Query: 280 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 339
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E + YV+ LQ
Sbjct: 184 FRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQ 243
Query: 340 RQVEFLS 346
RQ++ L+
Sbjct: 244 RQIQELT 250
>gi|4093153|gb|AAC99771.1| phytochrome-associated protein 3 [Arabidopsis thaliana]
Length = 524
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R + + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA MLDE I Y++SLQ QV+
Sbjct: 339 SKRSRLAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKSLQLQVQ 397
Query: 344 FLSM 347
+SM
Sbjct: 398 IMSM 401
>gi|449515805|ref|XP_004164938.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 549
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA MLDE I Y+++LQ QV+
Sbjct: 298 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKA-DKASMLDEAIEYLKTLQLQVQM 356
Query: 345 LSMKLATV 352
+SM V
Sbjct: 357 MSMGCGMV 364
>gi|18411987|ref|NP_567245.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|79324985|ref|NP_001031577.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|75277341|sp|O22768.2|UNE12_ARATH RecName: Full=Transcription factor UNE12; AltName: Full=Basic
helix-loop-helix protein 59; Short=AtbHLH59; Short=bHLH
59; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 12;
AltName: Full=Transcription factor EN 93; AltName:
Full=bHLH transcription factor bHLH059
gi|13605859|gb|AAK32915.1|AF367328_1 AT4g02590/T10P11_13 [Arabidopsis thaliana]
gi|3892050|gb|AAC78259.1| hypothetical protein [Arabidopsis thaliana]
gi|7269019|emb|CAB80752.1| hypothetical protein [Arabidopsis thaliana]
gi|23506061|gb|AAN28890.1| At4g02590/T10P11_13 [Arabidopsis thaliana]
gi|222422973|dbj|BAH19471.1| AT4G02590 [Arabidopsis thaliana]
gi|332656799|gb|AEE82199.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656800|gb|AEE82200.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 310
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Query: 270 SKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLD 329
S P +P VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+D
Sbjct: 134 SAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMID 192
Query: 330 EIINYVQSLQRQVEFLSM 347
EI++YV+ L+ QV+ LSM
Sbjct: 193 EIVDYVKFLRLQVKVLSM 210
>gi|226509284|ref|NP_001148741.1| DNA binding protein [Zea mays]
gi|195621758|gb|ACG32709.1| DNA binding protein [Zea mays]
gi|414887073|tpg|DAA63087.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414887074|tpg|DAA63088.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 374
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR KISER++ LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 292 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 351
Query: 342 VEFL 345
V+ L
Sbjct: 352 VKVL 355
>gi|15233768|ref|NP_192657.1| transcription factor bHLH81 [Arabidopsis thaliana]
gi|75311758|sp|Q9M0R0.1|BH081_ARATH RecName: Full=Transcription factor bHLH81; AltName: Full=Basic
helix-loop-helix protein 81; Short=AtbHLH81; Short=bHLH
81; AltName: Full=Transcription factor EN 72; AltName:
Full=bHLH transcription factor bHLH081
gi|7267561|emb|CAB78042.1| putative protein [Arabidopsis thaliana]
gi|34146832|gb|AAQ62424.1| At4g09180 [Arabidopsis thaliana]
gi|110741264|dbj|BAF02182.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332657332|gb|AEE82732.1| transcription factor bHLH81 [Arabidopsis thaliana]
Length = 262
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 49/67 (73%)
Query: 280 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 339
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E + YV+ LQ
Sbjct: 182 FRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQ 241
Query: 340 RQVEFLS 346
RQ++ L+
Sbjct: 242 RQIQELT 248
>gi|218193849|gb|EEC76276.1| hypothetical protein OsI_13762 [Oryza sativa Indica Group]
Length = 505
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 246 PEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKD--YIHVRARRGQATDSHSLAERVRREK 303
P +S S ++ SDS + E K + RR +A + H+L+ER RR++
Sbjct: 292 PSESASAHKRKGREDSDSRSEDAECEATEETKSSSRRYGSKRRTRAAEVHNLSERRRRDR 351
Query: 304 ISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
I+E+M+ LQ+L+P CNK T KA +LDE I Y++SLQ QV+ + M
Sbjct: 352 INEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQVQIMWM 394
>gi|21593792|gb|AAM65759.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Query: 270 SKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLD 329
S P +P VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+D
Sbjct: 134 SAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMID 192
Query: 330 EIINYVQSLQRQVEFLSM 347
EI++YV+ L+ QV+ LSM
Sbjct: 193 EIVDYVKFLRLQVKVLSM 210
>gi|357128032|ref|XP_003565680.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF3-like
[Brachypodium distachyon]
Length = 614
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 402 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 460
Query: 345 LSMKLATVNPRMDL 358
+SM P M L
Sbjct: 461 MSMGTGLCIPPMLL 474
>gi|23495742|dbj|BAC19953.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
gi|24059945|dbj|BAC21408.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
Length = 417
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 58/89 (65%), Gaps = 6/89 (6%)
Query: 264 SKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 323
S+ D ++P + P RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK T
Sbjct: 209 SEVADETRPSKRP-----AAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TD 262
Query: 324 KAVMLDEIINYVQSLQRQVEFLSMKLATV 352
KA +LDE I Y++SLQ QV+ + M V
Sbjct: 263 KASILDEAIEYLKSLQMQVQIMWMTTGIV 291
>gi|222625912|gb|EEE60044.1| hypothetical protein OsJ_12829 [Oryza sativa Japonica Group]
Length = 489
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 246 PEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKD--YIHVRARRGQATDSHSLAERVRREK 303
P +S S ++ SDS + E K + RR +A + H+L+ER RR++
Sbjct: 276 PSESASAHKRKGREDSDSRSEDAECEATEETKSSSRRYGSKRRTRAAEVHNLSERRRRDR 335
Query: 304 ISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
I+E+M+ LQ+L+P CNK T KA +LDE I Y++SLQ QV+ + M
Sbjct: 336 INEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQVQIMWM 378
>gi|414589820|tpg|DAA40391.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 244
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 281 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 340
+RA+RG AT S+AERVRR KISER++ LQ+LVP K T A MLD ++Y++ LQ+
Sbjct: 159 KIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQK 218
Query: 341 QVEFL 345
QV+ L
Sbjct: 219 QVKVL 223
>gi|115455729|ref|NP_001051465.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|108711401|gb|ABF99196.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108711403|gb|ABF99198.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549936|dbj|BAF13379.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|215740666|dbj|BAG97322.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 410
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 246 PEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKD--YIHVRARRGQATDSHSLAERVRREK 303
P +S S ++ SDS + E K + RR +A + H+L+ER RR++
Sbjct: 176 PSESASAHKRKGREDSDSRSEDAECEATEETKSSSRRYGSKRRTRAAEVHNLSERRRRDR 235
Query: 304 ISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
I+E+M+ LQ+L+P CNK T KA +LDE I Y++SLQ QV+ + M
Sbjct: 236 INEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQVQIMWM 278
>gi|108711402|gb|ABF99197.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 421
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 246 PEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKD--YIHVRARRGQATDSHSLAERVRREK 303
P +S S ++ SDS + E K + RR +A + H+L+ER RR++
Sbjct: 187 PSESASAHKRKGREDSDSRSEDAECEATEETKSSSRRYGSKRRTRAAEVHNLSERRRRDR 246
Query: 304 ISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
I+E+M+ LQ+L+P CNK T KA +LDE I Y++SLQ QV+ + M
Sbjct: 247 INEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQVQIMWM 289
>gi|359744468|gb|AEV57494.1| rice phytochrome-interacting factor 4 [Oryza sativa Japonica Group]
Length = 414
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 58/89 (65%), Gaps = 6/89 (6%)
Query: 264 SKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 323
S+ D ++P + P RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK T
Sbjct: 206 SEVADETRPSKRP-----AAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TD 259
Query: 324 KAVMLDEIINYVQSLQRQVEFLSMKLATV 352
KA +LDE I Y++SLQ QV+ + M V
Sbjct: 260 KASILDEAIEYLKSLQMQVQIMWMTTGIV 288
>gi|356525636|ref|XP_003531430.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 450
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISER+K LQDL P K T A MLD + Y++ LQ++
Sbjct: 366 IRAKRGFATHPRSIAERVRRTRISERIKKLQDLFPKSEKQTSTADMLDLAVEYIKDLQQK 425
Query: 342 VEFLS 346
V+ LS
Sbjct: 426 VKILS 430
>gi|242037911|ref|XP_002466350.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
gi|241920204|gb|EER93348.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
Length = 424
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 281 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 340
H RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA +LDE I Y++SLQ
Sbjct: 223 HGPKRRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASILDETIEYLKSLQM 281
Query: 341 QVEFLSM 347
QV+ + M
Sbjct: 282 QVQIMWM 288
>gi|115479871|ref|NP_001063529.1| Os09g0487900 [Oryza sativa Japonica Group]
gi|113631762|dbj|BAF25443.1| Os09g0487900 [Oryza sativa Japonica Group]
Length = 401
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISER++ LQ+LVP K T A MLD ++Y++ LQ+Q
Sbjct: 319 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 378
Query: 342 VEFL 345
V+ L
Sbjct: 379 VKVL 382
>gi|224066527|ref|XP_002302124.1| predicted protein [Populus trichocarpa]
gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 31 RRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQV 89
Query: 345 LSMKLATVNPRMDLNMEALLSK 366
+ M V P M ++ +S+
Sbjct: 90 MWMGSGIV-PVMFPGVQHFMSR 110
>gi|414869403|tpg|DAA47960.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 380
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 48/64 (75%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRA+RG AT S+AERVRR KISER++ LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 297 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 356
Query: 342 VEFL 345
V+ L
Sbjct: 357 VKAL 360
>gi|222636419|gb|EEE66551.1| hypothetical protein OsJ_23063 [Oryza sativa Japonica Group]
Length = 517
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 58/89 (65%), Gaps = 6/89 (6%)
Query: 264 SKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 323
S+ D ++P + P RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK T
Sbjct: 309 SEVADETRPSKRP-----AAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TD 362
Query: 324 KAVMLDEIINYVQSLQRQVEFLSMKLATV 352
KA +LDE I Y++SLQ QV+ + M V
Sbjct: 363 KASILDEAIEYLKSLQMQVQIMWMTTGIV 391
>gi|125564183|gb|EAZ09563.1| hypothetical protein OsI_31842 [Oryza sativa Indica Group]
Length = 400
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISER++ LQ+LVP K T A MLD ++Y++ LQ+Q
Sbjct: 318 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 377
Query: 342 VEFL 345
V+ L
Sbjct: 378 VKVL 381
>gi|226505986|ref|NP_001147910.1| DNA binding protein [Zea mays]
gi|195614520|gb|ACG29090.1| DNA binding protein [Zea mays]
Length = 380
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 48/64 (75%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRA+RG AT S+AERVRR KISER++ LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 297 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 356
Query: 342 VEFL 345
V+ L
Sbjct: 357 VKAL 360
>gi|186511471|ref|NP_001118919.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656801|gb|AEE82201.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 247
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Query: 270 SKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLD 329
S P +P VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+D
Sbjct: 71 SAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMID 129
Query: 330 EIINYVQSLQRQVEFLSM 347
EI++YV+ L+ QV+ LSM
Sbjct: 130 EIVDYVKFLRLQVKVLSM 147
>gi|297606720|ref|NP_001058876.2| Os07g0143200 [Oryza sativa Japonica Group]
gi|255677508|dbj|BAF20790.2| Os07g0143200 [Oryza sativa Japonica Group]
Length = 447
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 58/89 (65%), Gaps = 6/89 (6%)
Query: 264 SKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 323
S+ D ++P + P RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK T
Sbjct: 210 SEVADETRPSKRP-----AAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TD 263
Query: 324 KAVMLDEIINYVQSLQRQVEFLSMKLATV 352
KA +LDE I Y++SLQ QV+ + M V
Sbjct: 264 KASILDEAIEYLKSLQMQVQIMWMTTGIV 292
>gi|218199079|gb|EEC81506.1| hypothetical protein OsI_24867 [Oryza sativa Indica Group]
Length = 593
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 58/89 (65%), Gaps = 6/89 (6%)
Query: 264 SKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 323
S+ D ++P + P RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK T
Sbjct: 385 SEVADETRPSKRP-----AAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TD 438
Query: 324 KAVMLDEIINYVQSLQRQVEFLSMKLATV 352
KA +LDE I Y++SLQ QV+ + M V
Sbjct: 439 KASILDEAIEYLKSLQMQVQIMWMTTGIV 467
>gi|147862096|emb|CAN80884.1| hypothetical protein VITISV_018653 [Vitis vinifera]
Length = 446
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 47/62 (75%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 362 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 421
Query: 342 VE 343
V+
Sbjct: 422 VK 423
>gi|115489518|ref|NP_001067246.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|77556567|gb|ABA99363.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108862946|gb|ABA99364.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649753|dbj|BAF30265.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|125537356|gb|EAY83844.1| hypothetical protein OsI_39060 [Oryza sativa Indica Group]
gi|215694924|dbj|BAG90115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
A+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 265 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 323
Query: 344 FLSM 347
+ M
Sbjct: 324 MMWM 327
>gi|108862947|gb|ABA99362.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 446
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
A+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 265 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 323
Query: 344 FLSM 347
+ M
Sbjct: 324 MMWM 327
>gi|359487434|ref|XP_003633592.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 408
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISERM+ LQ+L P +K T A MLD + Y++ LQ+Q
Sbjct: 333 IRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQ 392
Query: 342 VEFL 345
V+ L
Sbjct: 393 VKTL 396
>gi|218187227|gb|EEC69654.1| hypothetical protein OsI_39066 [Oryza sativa Indica Group]
Length = 469
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
A+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 274 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 332
Query: 344 FLSM 347
+ M
Sbjct: 333 MMWM 336
>gi|125606147|gb|EAZ45183.1| hypothetical protein OsJ_29826 [Oryza sativa Japonica Group]
Length = 379
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISER++ LQ+LVP K T A MLD ++Y++ LQ+Q
Sbjct: 297 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 356
Query: 342 VEFL 345
V+ L
Sbjct: 357 VKVL 360
>gi|297848526|ref|XP_002892144.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337986|gb|EFH68403.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 306
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 148 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 206
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 207 VKVLSM 212
>gi|414877117|tpg|DAA54248.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 567
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 349 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 407
Query: 345 LSMKLATVNPRMDL 358
++M P M L
Sbjct: 408 MAMGSGLCIPPMLL 421
>gi|125562107|gb|EAZ07555.1| hypothetical protein OsI_29809 [Oryza sativa Indica Group]
Length = 403
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISER++ LQ+LVP +K T A MLD ++Y++ LQ+Q
Sbjct: 322 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 381
Query: 342 VEFL 345
V+ L
Sbjct: 382 VKGL 385
>gi|168021524|ref|XP_001763291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685426|gb|EDQ71821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RARRG ATD S+ R RREKI+ER+K LQ LVP KV MLDE I+YVQ LQ QV
Sbjct: 443 RARRGSATDPQSVYARHRREKINERLKTLQHLVPNGAKV-DIVTMLDEAIHYVQFLQLQV 501
Query: 343 EFL 345
L
Sbjct: 502 TLL 504
>gi|168045219|ref|XP_001775076.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673663|gb|EDQ60183.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 73
Score = 71.6 bits (174), Expect = 9e-10, Method: Composition-based stats.
Identities = 40/71 (56%), Positives = 48/71 (67%)
Query: 280 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 339
+ RA+RG AT S+AERVRR +ISERMK LQDLVP K T A MLDE + YV+SLQ
Sbjct: 3 MRARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTADMLDETVEYVKSLQ 62
Query: 340 RQVEFLSMKLA 350
+V L +A
Sbjct: 63 VKVSELQETIA 73
>gi|339716188|gb|AEJ88333.1| putative MYC protein [Tamarix hispida]
Length = 160
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 48/64 (75%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E + YV+ LQ+Q
Sbjct: 84 VRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKGLQKQ 143
Query: 342 VEFL 345
+E L
Sbjct: 144 IEEL 147
>gi|115477188|ref|NP_001062190.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|42408931|dbj|BAD10188.1| putative transcription factor RAU1 [Oryza sativa Japonica Group]
gi|113624159|dbj|BAF24104.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|125603951|gb|EAZ43276.1| hypothetical protein OsJ_27873 [Oryza sativa Japonica Group]
gi|215712322|dbj|BAG94449.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISER++ LQ+LVP +K T A MLD ++Y++ LQ+Q
Sbjct: 318 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 377
Query: 342 VEFL 345
V+ L
Sbjct: 378 VKGL 381
>gi|334182257|ref|NP_001184895.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|4587574|gb|AAD25805.1|AC006550_13 Contains PF|00010 helix-loop-helix DNA-binding domain. ESTs
gb|T45640 and gb|T22783 come from this gene [Arabidopsis
thaliana]
gi|332189398|gb|AEE27519.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 297
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 139 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 197
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 198 VKVLSM 203
>gi|414869406|tpg|DAA47963.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 277
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 48/64 (75%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRA+RG AT S+AERVRR KISER++ LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 194 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 253
Query: 342 VEFL 345
V+ L
Sbjct: 254 VKAL 257
>gi|242042934|ref|XP_002459338.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
gi|241922715|gb|EER95859.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
Length = 446
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
RR +A + H+++ER RR++I+E+M+ LQ+LVP CNK T KA +LDE I Y++SLQ QV+
Sbjct: 245 RRTRAAEVHNMSERRRRDRINEKMRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 303
Query: 345 LSM 347
+ M
Sbjct: 304 MWM 306
>gi|242084158|ref|XP_002442504.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
gi|241943197|gb|EES16342.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
Length = 531
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Query: 251 SMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKF 310
S + KQ + +D+ + S V + A+R +A + H+L+ER RR++I+E+MK
Sbjct: 277 SGKRKQSVDATDAEDVEFESADVTCEPAHKTATAKRRRAAEVHNLSERRRRDRINEKMKA 336
Query: 311 LQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
LQ+L+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 337 LQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 368
>gi|18379045|ref|NP_563672.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|75305862|sp|Q93Y00.1|BH007_ARATH RecName: Full=Transcription factor bHLH7; AltName: Full=Basic
helix-loop-helix protein 7; Short=AtbHLH7; Short=bHLH 7;
AltName: Full=Transcription factor EN 92; AltName:
Full=bHLH transcription factor bHLH007
gi|21735477|gb|AAL55714.2|AF251692_1 putative transcription factor BHLH7 [Arabidopsis thaliana]
gi|15450779|gb|AAK96661.1| Unknown protein [Arabidopsis thaliana]
gi|21387097|gb|AAM47952.1| unknown protein [Arabidopsis thaliana]
gi|332189397|gb|AEE27518.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 302
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 202
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 203 VKVLSM 208
>gi|224139834|ref|XP_002323299.1| predicted protein [Populus trichocarpa]
gi|222867929|gb|EEF05060.1| predicted protein [Populus trichocarpa]
Length = 107
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ+Q
Sbjct: 30 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 89
Query: 342 VEFLS 346
+ LS
Sbjct: 90 YKTLS 94
>gi|242082273|ref|XP_002445905.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
gi|241942255|gb|EES15400.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
Length = 399
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR KISER++ LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 317 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 376
Query: 342 VEFL 345
V+ L
Sbjct: 377 VKAL 380
>gi|224120208|ref|XP_002330991.1| predicted protein [Populus trichocarpa]
gi|222872921|gb|EEF10052.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD + Y++ LQ+Q
Sbjct: 271 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVVYIKDLQKQ 330
Query: 342 VEFLS 346
+ LS
Sbjct: 331 YKTLS 335
>gi|222080621|gb|ACM41587.1| bHLH transcription factor MYC4 [Catharanthus roseus]
Length = 259
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 49/66 (74%)
Query: 281 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 340
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E + YV+ LQ+
Sbjct: 182 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQK 241
Query: 341 QVEFLS 346
Q++ L+
Sbjct: 242 QIQELT 247
>gi|225441696|ref|XP_002277274.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 405
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD + Y++ LQ+Q
Sbjct: 321 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 380
Query: 342 VEFLS 346
L+
Sbjct: 381 YNTLT 385
>gi|414877115|tpg|DAA54246.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 377
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 159 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 217
Query: 345 LSMKLATVNPRMDL 358
++M P M L
Sbjct: 218 MAMGSGLCIPPMLL 231
>gi|297736219|emb|CBI24857.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISERM+ LQ+L P +K T A MLD + Y++ LQ+Q
Sbjct: 171 IRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQ 230
Query: 342 VEFL 345
V+ L
Sbjct: 231 VKTL 234
>gi|19401700|gb|AAL87667.1| transcription factor RAU1 [Oryza sativa]
Length = 150
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISER++ LQ+LVP +K T A MLD ++Y++ LQ+Q
Sbjct: 69 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 128
Query: 342 VEFL 345
V+ L
Sbjct: 129 VKGL 132
>gi|147789805|emb|CAN62935.1| hypothetical protein VITISV_008845 [Vitis vinifera]
Length = 394
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD + Y++ LQ+Q
Sbjct: 310 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 369
Query: 342 VEFLS 346
L+
Sbjct: 370 YNTLT 374
>gi|118486519|gb|ABK95099.1| unknown [Populus trichocarpa]
Length = 561
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R +AT+ H+L+ER RR++I+++M+ LQDL+P NKV KA ML E I+Y++SLQ QV+
Sbjct: 377 SKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNKVD-KASMLGEAIDYLKSLQLQVQ 435
Query: 344 FLSMKLATVNPRMDL 358
+SM P M L
Sbjct: 436 MMSMGTRLCMPLMML 450
>gi|224130812|ref|XP_002320931.1| predicted protein [Populus trichocarpa]
gi|222861704|gb|EEE99246.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R +AT+ H+L+ER RR++I+++M+ LQDL+P NKV KA ML E I+Y++SLQ QV+
Sbjct: 371 SKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNKVD-KASMLGEAIDYLKSLQLQVQ 429
Query: 344 FLSMKLATVNPRMDL 358
+SM P M L
Sbjct: 430 MMSMGTRLCMPLMML 444
>gi|357148389|ref|XP_003574744.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 377
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISER++ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQ 359
Query: 342 VEFL 345
V+ +
Sbjct: 360 VKVI 363
>gi|226491584|ref|NP_001147257.1| protein SPATULA [Zea mays]
gi|195609152|gb|ACG26406.1| protein SPATULA [Zea mays]
Length = 185
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
ARR ++ + H+ +ER RR+KI+E++K LQ+L+P CNK T K MLDE I+Y++SLQ Q++
Sbjct: 14 ARRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNK-TDKVSMLDEAIDYLKSLQLQLQ 72
Query: 344 FLSM 347
L M
Sbjct: 73 MLVM 76
>gi|326495514|dbj|BAJ85853.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISER++ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 307 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQ 366
Query: 342 VEFL 345
V+ +
Sbjct: 367 VKVI 370
>gi|124360931|gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 484
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+R +A + H+L+ER RR++I+E+MK LQ+L+P NK + KA MLDE I+Y++SLQ QV+
Sbjct: 255 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNK-SDKASMLDEAIDYLKSLQLQVQM 313
Query: 345 LSMKLATV 352
+SM V
Sbjct: 314 MSMGCGMV 321
>gi|297739719|emb|CBI29901.3| unnamed protein product [Vitis vinifera]
Length = 280
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD + Y++ LQ+Q
Sbjct: 196 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 255
Query: 342 VEFLS 346
L+
Sbjct: 256 YNTLT 260
>gi|414590534|tpg|DAA41105.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 47/62 (75%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR KISER++ LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 288 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQKQ 347
Query: 342 VE 343
V+
Sbjct: 348 VK 349
>gi|297605234|ref|NP_001056902.2| Os06g0164400 [Oryza sativa Japonica Group]
gi|255676746|dbj|BAF18816.2| Os06g0164400, partial [Oryza sativa Japonica Group]
Length = 188
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R +A + H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 22 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 80
Query: 344 FLSMKLAT-VNP-RMDLNMEALLSKDLFQSCG 373
LSM+ +NP + +E + +F + G
Sbjct: 81 MLSMRNGVYLNPSYLSGALEPAQASQMFAALG 112
>gi|118488234|gb|ABK95936.1| unknown [Populus trichocarpa]
Length = 283
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 38/47 (80%)
Query: 275 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKV 321
P + VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NKV
Sbjct: 234 PAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKV 280
>gi|449447291|ref|XP_004141402.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 208 QITSQTVTDS--NPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSK 265
QI S+ T+S N +K S +R K +E EN S M S SD+S
Sbjct: 178 QIKSRKGTESSGNSKKVSSTRRRKCEEE---------QENGRSSCDMNSCS----SDNSS 224
Query: 266 TKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKA 325
DN+ PK RA RG ATD SL R RRE+I+ER++ LQ LVP KV +
Sbjct: 225 EDDNNNASPKPK----TRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVD-IS 279
Query: 326 VMLDEIINYVQSLQRQVEFLS-----MKLATVNPRMDLNMEALLSKDL 368
ML+E ++YV+ LQ Q++ LS M MD+ ++ LS L
Sbjct: 280 TMLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLQQKLSSIL 327
>gi|449515097|ref|XP_004164586.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 82/165 (49%), Gaps = 25/165 (15%)
Query: 208 QITSQTVTDS--NPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSK 265
QI S+ T+S N +K S +R K +E EN S M S SD+S
Sbjct: 178 QIKSRKGTESSGNSKKVSSTRRRKCEEE---------QENGRSSCDMNSC----SSDNSS 224
Query: 266 TKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKA 325
DN+ PK RA RG ATD SL R RRE+I+ER++ LQ LVP KV +
Sbjct: 225 EDDNNNASPKPK----TRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKV-DIS 279
Query: 326 VMLDEIINYVQSLQRQVEFLS-----MKLATVNPRMDLNMEALLS 365
ML+E ++YV+ LQ Q++ LS M MD+ ++ LS
Sbjct: 280 TMLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLQQKLS 324
>gi|15219606|ref|NP_174776.1| transcription factor bHLH80 [Arabidopsis thaliana]
gi|75308885|sp|Q9C8P8.1|BH080_ARATH RecName: Full=Transcription factor bHLH80; AltName: Full=Basic
helix-loop-helix protein 80; Short=AtbHLH80; Short=bHLH
80; AltName: Full=Transcription factor EN 71; AltName:
Full=bHLH transcription factor bHLH080
gi|12324283|gb|AAG52112.1|AC023064_5 helix-loop-helix protein 1A, putative; 28707-26892 [Arabidopsis
thaliana]
gi|15724178|gb|AAL06481.1|AF411791_1 At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|20127088|gb|AAM10958.1|AF488612_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|20147401|gb|AAM10410.1| At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|332193674|gb|AEE31795.1| transcription factor bHLH80 [Arabidopsis thaliana]
Length = 259
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 49/65 (75%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E + YV++LQ Q
Sbjct: 181 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQ 240
Query: 342 VEFLS 346
++ L+
Sbjct: 241 IQELT 245
>gi|242086827|ref|XP_002439246.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
gi|241944531|gb|EES17676.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
Length = 480
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
A+R + + H+++ER RR++I+E+M+ LQ+L+P CNK+ KA ML+E I Y+++LQ QV+
Sbjct: 257 AKRSRTAEVHNMSERRRRDRINEKMRALQELIPNCNKID-KASMLEEAIEYLKTLQLQVQ 315
Query: 344 FLSMKLATVNPRMDLNMEAL 363
+SM P + + A+
Sbjct: 316 MMSMGTGLCMPPAAMLLPAM 335
>gi|449439645|ref|XP_004137596.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
gi|449487081|ref|XP_004157490.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 458
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
ARR +A H+ +ER RR++I+E+MK LQ LVP +K T KA MLDE+I Y++ LQ QV+
Sbjct: 257 ARRSRAAAIHNQSERRRRDRINEKMKALQKLVPNASK-TDKASMLDEVIEYLKQLQAQVQ 315
Query: 344 FLSMK 348
F+S++
Sbjct: 316 FMSVR 320
>gi|449447621|ref|XP_004141566.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
gi|449522500|ref|XP_004168264.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
Length = 244
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 49/65 (75%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRA+RG AT S+AERVRR +IS+R++ LQ++VP +K T A ML+E + YV+ LQ+Q
Sbjct: 168 VRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQ 227
Query: 342 VEFLS 346
++ L+
Sbjct: 228 IQELT 232
>gi|42567227|ref|NP_194608.3| transcription factor bHLH23 [Arabidopsis thaliana]
gi|75313939|sp|Q9SVU6.1|BH023_ARATH RecName: Full=Transcription factor bHLH23; AltName: Full=Basic
helix-loop-helix protein 23; Short=AtbHLH23; Short=bHLH
23; AltName: Full=Transcription factor EN 107; AltName:
Full=bHLH transcription factor bHLH023
gi|4218119|emb|CAA22973.1| putative protein [Arabidopsis thaliana]
gi|7269734|emb|CAB81467.1| putative protein [Arabidopsis thaliana]
gi|225898825|dbj|BAH30543.1| hypothetical protein [Arabidopsis thaliana]
gi|332660145|gb|AEE85545.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 413
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R +A H L+ER RR+KI+E MK LQ+L+P C K T ++ MLD++I YV+SLQ Q++
Sbjct: 273 SKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTK-TDRSSMLDDVIEYVKSLQSQIQ 331
Query: 344 FLSMKLATVNPRM 356
SM + P M
Sbjct: 332 MFSMGHVMIPPMM 344
>gi|449450552|ref|XP_004143026.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
gi|449522833|ref|XP_004168430.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 329
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 81/150 (54%), Gaps = 14/150 (9%)
Query: 204 SLSEQITSQTVTDSNPRKRKS---IQRPKAKETPPTSDPKVVAENPED----SNSMRSKQ 256
+L ++ + ++D+ +K ++ +QR K T D K EN E+ S S S Q
Sbjct: 158 ALKRKVNNGDISDNQKKKTRTTSNVQRKKK-----TEDQKKRGENVEEEGQSSISYNSDQ 212
Query: 257 DENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVP 316
+EN S+ + + + + RA RG ATD SL R RRE+I+ER++ LQ LVP
Sbjct: 213 EENSSEEANGGGSGATSDGGVNR-KSRASRGSATDPQSLYARKRRERINERLRILQKLVP 271
Query: 317 GCNKVTGKAVMLDEIINYVQSLQRQVEFLS 346
KV + ML+E ++YV+ LQ Q++ LS
Sbjct: 272 NGTKVD-ISTMLEEAVHYVKFLQLQIKLLS 300
>gi|413917616|gb|AFW57548.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 505
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
A+R + + H+L+ER RR++I+E+M+ LQ+L+P CNKV K+ ML+E I Y+++LQ QV+
Sbjct: 318 AKRCRTAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KSSMLEEAIEYLKTLQLQVQ 376
Query: 344 FLSMKLATVNPRMDLNMEAL 363
+SM P + + A+
Sbjct: 377 MMSMGTGLCMPPAAMLLPAM 396
>gi|297846606|ref|XP_002891184.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337026|gb|EFH67443.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 256
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 49/65 (75%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E + YV++LQ Q
Sbjct: 178 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQGQ 237
Query: 342 VEFLS 346
++ L+
Sbjct: 238 IQELT 242
>gi|168042242|ref|XP_001773598.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675137|gb|EDQ61636.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RA+RG ATD S+ R RREKI+ER+K LQ+LVP KV MLDE I+YV+ LQ QV
Sbjct: 443 RAKRGSATDPQSVYARHRREKINERLKNLQNLVPNGAKVD-IVTMLDEAIHYVKFLQTQV 501
Query: 343 EFL 345
E L
Sbjct: 502 ELL 504
>gi|378924999|dbj|BAL63287.1| basic helix-loop-helix protein APG [Oryza sativa Japonica Group]
Length = 432
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA ML+E I Y+++LQ QV+
Sbjct: 332 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLEEAIEYLKTLQLQVQM 390
Query: 345 LSMKLATVNP 354
+SM P
Sbjct: 391 MSMGTGMFVP 400
>gi|224106043|ref|XP_002314023.1| predicted protein [Populus trichocarpa]
gi|222850431|gb|EEE87978.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISERM+ LQ+L P +K T A MLD + +++ LQ+Q
Sbjct: 337 IRAKRGFATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEHIKDLQKQ 396
Query: 342 VEFLS 346
V+ L+
Sbjct: 397 VKTLT 401
>gi|357159056|ref|XP_003578325.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 409
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR KISER++ LQ+LVP K T + MLD ++Y++ LQ Q
Sbjct: 327 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQ 386
Query: 342 VEFL 345
V+ +
Sbjct: 387 VKVM 390
>gi|226502090|ref|NP_001146660.1| uncharacterized protein LOC100280260 [Zea mays]
gi|219888217|gb|ACL54483.1| unknown [Zea mays]
gi|414868921|tpg|DAA47478.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 397
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 250 NSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMK 309
+ R +D++ +D EP + + RR A H+L+ER RR++I+E+MK
Sbjct: 215 GAARRSGKRKHNDATDAEDVGLECEPAQRTTTAKRRR--AAQVHNLSERRRRDRINEKMK 272
Query: 310 FLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
LQ+L+P CNK KA MLDE I Y++SLQ Q++ + M
Sbjct: 273 ALQELIPHCNKAD-KASMLDEAIEYLKSLQLQLQVVWM 309
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 170 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 228
Query: 344 FLSMK 348
LSM+
Sbjct: 229 MLSMR 233
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 170 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 228
Query: 344 FLSMK 348
LSM+
Sbjct: 229 MLSMR 233
>gi|449475553|ref|XP_004154488.1| PREDICTED: transcription factor bHLH82-like [Cucumis sativus]
Length = 173
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 18/100 (18%)
Query: 266 TKDNSKPVEP---------PKDYIH--VRARRGQATDSHSLAERVRREKISERMKFLQDL 314
TK+ KP+ P PK + +R +A + H+L+ER RR++I+E+MK LQ+L
Sbjct: 25 TKETPKPLWPSDVEYESADPKKQLRGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQEL 84
Query: 315 VPGCNKV-------TGKAVMLDEIINYVQSLQRQVEFLSM 347
+P CNK+ T KA MLDE I Y+++LQ QV+ +
Sbjct: 85 IPRCNKLSSFTDSQTDKASMLDEAIEYLKTLQLQVQIFVL 124
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 59/88 (67%), Gaps = 3/88 (3%)
Query: 263 SSKTKDNSKPVEPPKDYIHVR--ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNK 320
S ++ ++ E P + + R ++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK
Sbjct: 98 SCDSEKGAEVAEVPSETVRPRNSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK 157
Query: 321 VTGKAVMLDEIINYVQSLQRQVEFLSMK 348
T KA MLDE I Y++ LQ QV+ L+M+
Sbjct: 158 -TDKASMLDEAIEYLKQLQLQVQMLTMR 184
>gi|302813935|ref|XP_002988652.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
gi|300143473|gb|EFJ10163.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
Length = 61
Score = 69.7 bits (169), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/39 (79%), Positives = 35/39 (89%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNK 320
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK
Sbjct: 1 VRARRGQATDPHSIAERLRREKIAERMKALQELVPNANK 39
>gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa Japonica Group]
gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group]
Length = 505
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA ML+E I Y+++LQ QV+
Sbjct: 332 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLEEAIEYLKTLQLQVQM 390
Query: 345 LSM 347
+SM
Sbjct: 391 MSM 393
>gi|326511035|dbj|BAJ91865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
R +R +A + H+L+E+ RR KI+E+MK LQ LVP +K T KA MLD+ I Y++ LQ QV
Sbjct: 45 RGKRARAAEVHNLSEKRRRCKINEKMKALQSLVPNSSK-TDKASMLDDAIEYLKHLQLQV 103
Query: 343 EFLSMKLATVNPRMDL 358
+ LSM+ P ++L
Sbjct: 104 QMLSMRNGVYRPSVNL 119
>gi|145334165|ref|NP_001078463.1| transcription factor bHLH127 [Arabidopsis thaliana]
gi|75296238|sp|Q7XHI7.1|BH127_ARATH RecName: Full=Transcription factor bHLH127; AltName: Full=Basic
helix-loop-helix protein 127; Short=AtbHLH127;
Short=bHLH 127; AltName: Full=bHLH transcription factor
bHLH127
gi|33111973|emb|CAE12173.1| putative bHLH127 transcription factor [Arabidopsis thaliana]
gi|332660148|gb|AEE85548.1| transcription factor bHLH127 [Arabidopsis thaliana]
Length = 307
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
+R +A + H+LAER RREKI+ERMK LQ L+P CNK T K ML+++I YV+SL+ Q+
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKST-KVSMLEDVIEYVKSLEMQI 203
>gi|388503832|gb|AFK39982.1| unknown [Medicago truncatula]
Length = 406
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +IS+R+K LQ L P +K T A MLD + Y++ LQ Q
Sbjct: 322 IRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQ 381
Query: 342 VEFLS 346
V+ L+
Sbjct: 382 VQILT 386
>gi|125541459|gb|EAY87854.1| hypothetical protein OsI_09276 [Oryza sativa Indica Group]
Length = 431
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 48/80 (60%), Gaps = 23/80 (28%)
Query: 290 TDSHSLAERV----------------------RREKISERMKFLQDLVPGCNKVTGKAVM 327
TD HS+AERV RRE+I+ERMK LQ+LVP NK T KA M
Sbjct: 219 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANK-TDKASM 277
Query: 328 LDEIINYVQSLQRQVEFLSM 347
LDEII+YV+ LQ QV+ LSM
Sbjct: 278 LDEIIDYVKFLQLQVKVLSM 297
>gi|326523485|dbj|BAJ92913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+RG+ + H+++ER RR++I+E+M+ LQ+L+P CNK+ KA ML+E I Y+++LQ QV+
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKID-KASMLEEAIEYLKTLQLQVQM 379
Query: 345 LS 346
+S
Sbjct: 380 MS 381
>gi|326500148|dbj|BAJ90909.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+RG+ + H+++ER RR++I+E+M+ LQ+L+P CNK+ KA ML+E I Y+++LQ QV+
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKID-KASMLEEAIEYLKTLQLQVQM 379
Query: 345 LS 346
+S
Sbjct: 380 MS 381
>gi|222623841|gb|EEE57973.1| hypothetical protein OsJ_08713 [Oryza sativa Japonica Group]
Length = 432
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 48/80 (60%), Gaps = 23/80 (28%)
Query: 290 TDSHSLAERV----------------------RREKISERMKFLQDLVPGCNKVTGKAVM 327
TD HS+AERV RRE+I+ERMK LQ+LVP NK T KA M
Sbjct: 220 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANK-TDKASM 278
Query: 328 LDEIINYVQSLQRQVEFLSM 347
LDEII+YV+ LQ QV+ LSM
Sbjct: 279 LDEIIDYVKFLQLQVKVLSM 298
>gi|357457619|ref|XP_003599090.1| DNA binding protein [Medicago truncatula]
gi|355488138|gb|AES69341.1| DNA binding protein [Medicago truncatula]
Length = 403
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +IS+R+K LQ L P +K T A MLD + Y++ LQ Q
Sbjct: 319 IRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQ 378
Query: 342 VEFLS 346
V+ L+
Sbjct: 379 VQILT 383
>gi|326503832|dbj|BAK02702.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 407
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR KISER++ LQ+LVP K T + MLD ++Y++ LQ Q
Sbjct: 324 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQ 383
Query: 342 VEFL 345
V+ +
Sbjct: 384 VKVM 387
>gi|242084064|ref|XP_002442457.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
gi|241943150|gb|EES16295.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
Length = 353
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
+RR + H+L E+ RR KI+ER+K LQ LVPGC+K + +A LD+ I+Y++SLQ+QV+
Sbjct: 188 SRRSHHGEGHNLTEKRRRHKINERLKTLQKLVPGCSK-SNQASTLDQTIHYMKSLQQQVQ 246
Query: 344 FLSMKLA 350
+S+ LA
Sbjct: 247 AMSVGLA 253
>gi|449436269|ref|XP_004135915.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449521930|ref|XP_004167982.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 419
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AER+RR +ISER+K LQ+L P +K T A ML+ + Y++ LQRQ
Sbjct: 342 IRAKRGCATHPRSIAERMRRTRISERIKKLQELFPDMDKQTSTADMLELAVEYIKGLQRQ 401
Query: 342 VEFLS 346
V+ L+
Sbjct: 402 VKTLT 406
>gi|392513513|emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
Length = 445
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+R +A + H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 181 KRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQM 239
Query: 345 LSMK 348
LSMK
Sbjct: 240 LSMK 243
>gi|312282747|dbj|BAJ34239.1| unnamed protein product [Thellungiella halophila]
Length = 308
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A M+DEI++YV+ L+ Q
Sbjct: 150 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVSK-TDRAAMIDEIVDYVKFLRLQ 208
Query: 342 VEFLSM 347
V+ LSM
Sbjct: 209 VKVLSM 214
>gi|357129887|ref|XP_003566591.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 448
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+RG+ + H+++ER RR++I+E+M+ LQ+L+P CNK+ KA ML+E I Y+++LQ QV+
Sbjct: 266 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKID-KASMLEEAIEYLKTLQLQVQM 324
Query: 345 LS 346
+S
Sbjct: 325 MS 326
>gi|356557136|ref|XP_003546874.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 445
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 47/69 (68%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AER RR +ISER+K LQDL P K T A MLD + +++ LQ+Q
Sbjct: 361 IRAKRGFATHPRSIAERERRTRISERIKKLQDLFPRSEKPTSTADMLDLAVEHIKDLQQQ 420
Query: 342 VEFLSMKLA 350
V+ LS + A
Sbjct: 421 VQILSDRKA 429
>gi|297803176|ref|XP_002869472.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
gi|297315308|gb|EFH45731.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
Length = 1780
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+R +A + H+LAER RREKI+E+MK LQ+L+P CNK T K L+++I Y++SLQ Q++
Sbjct: 1139 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKST-KVSTLEDVIEYMKSLQMQIQM 1197
Query: 345 LS 346
+S
Sbjct: 1198 MS 1199
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+R +A + H+LAER RREKI+E+MK LQ+L+P CNK T K L+++I YV+SL+ Q++
Sbjct: 1569 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKST-KVSTLEDVIEYVKSLEMQIQH 1627
Query: 345 LSMKLATVNPRMDLNMEALLSKDLFQSC 372
M + + ++ LL K + C
Sbjct: 1628 YVMNFRIMT-EVLISESMLLCKMMSTGC 1654
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+R +A + H+LAER RREKI+E+MK LQ+L+P CNK T K LD I YV+ LQ Q++
Sbjct: 135 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKST-KVSTLDAAIEYVKWLQSQIQM 193
Query: 345 LSM 347
+ M
Sbjct: 194 ILM 196
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+R + + H+LAER RREKI+E +K LQ+L+P CNK T K LD+ I YV+ LQ Q++
Sbjct: 581 KRSRTAEMHNLAERRRREKINENIKTLQELIPRCNKST-KVSTLDDAIEYVKWLQSQIQM 639
Query: 345 LSMKLATVNPRM 356
+S + P M
Sbjct: 640 MSTGQGMMPPMM 651
>gi|356548947|ref|XP_003542860.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 438
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AER RR +IS R+K LQDL P +K T A MLD + Y++ LQ+Q
Sbjct: 360 IRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKSDKQTSTADMLDLAVEYIKDLQKQ 419
Query: 342 VEFL 345
V+ L
Sbjct: 420 VKIL 423
>gi|297828431|ref|XP_002882098.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
gi|297327937|gb|EFH58357.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
Length = 413
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 68/119 (57%), Gaps = 18/119 (15%)
Query: 247 EDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRAR-----RGQATDSHSLAERVRR 301
E+ ++ S +++SD +KT+ +H R R R ++T+ H L ER RR
Sbjct: 192 EEESTYLSNNPDDESDDAKTQ------------VHARIRKPVTKRKRSTEVHKLYERKRR 239
Query: 302 EKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNM 360
++ +++M+ LQD++P C K KA +LDE + Y+++LQ QV+ +SM + P M L M
Sbjct: 240 DEFNKKMRALQDILPNCYK-DDKASLLDEAVKYMRTLQHQVQMMSMGNGLIRPPMMLPM 297
>gi|212720610|ref|NP_001131794.1| uncharacterized protein LOC100193167 [Zea mays]
gi|194692562|gb|ACF80365.1| unknown [Zea mays]
gi|413953032|gb|AFW85681.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+R +A + H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 102 KRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQM 160
Query: 345 LSMKLATV--NPRMDLNMEALLSKDLFQSCG 373
LSM+ P + +E + +F + G
Sbjct: 161 LSMRNGVYLNPPYLSGTIEPAQASQMFAAVG 191
>gi|356542383|ref|XP_003539646.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 434
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AER RR +IS R+K LQDL P +K T A MLD + Y++ LQ+Q
Sbjct: 356 IRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKTDKQTSTADMLDLAVEYIKDLQKQ 415
Query: 342 VEFL 345
V+ L
Sbjct: 416 VKML 419
>gi|326525038|dbj|BAK07789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+RG+ + H+++ER RR++I+E+M+ LQ+L+P CNK+ KA ML+E I Y+++LQ QV+
Sbjct: 325 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKID-KASMLEEAIEYLKTLQLQVQM 383
Query: 345 LS 346
+S
Sbjct: 384 MS 385
>gi|226510391|ref|NP_001150862.1| LOC100284495 [Zea mays]
gi|195642440|gb|ACG40688.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 359
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRG AT S+AER RR +IS+R+K LQDLVP +K T + MLD ++Y++ L+ Q
Sbjct: 280 VRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELKDQ 339
Query: 342 VEFL 345
VE L
Sbjct: 340 VEKL 343
>gi|357118625|ref|XP_003561052.1| PREDICTED: uncharacterized protein LOC100821164 [Brachypodium
distachyon]
Length = 331
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R +A + H+L+E+ RR +I+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 102 SKRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 160
Query: 344 FLSMKLAT-VNP-RMDLNMEALLSKDLFQSCG 373
LSM+ +NP + +E + + +F + G
Sbjct: 161 MLSMRNGVYLNPSYLSGALEPMQASQMFAALG 192
>gi|218196060|gb|EEC78487.1| hypothetical protein OsI_18387 [Oryza sativa Indica Group]
Length = 289
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R + + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA ML+E I Y+++LQ QV+
Sbjct: 115 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLEEAIEYLKTLQLQVQ 173
Query: 344 FLSM 347
+SM
Sbjct: 174 MMSM 177
>gi|222630134|gb|EEE62266.1| hypothetical protein OsJ_17053 [Oryza sativa Japonica Group]
Length = 404
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R + + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA ML+E I Y+++LQ QV+
Sbjct: 210 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLEEAIEYLKTLQLQVQ 268
Query: 344 FLSM 347
+SM
Sbjct: 269 MMSM 272
>gi|222635086|gb|EEE65218.1| hypothetical protein OsJ_20364 [Oryza sativa Japonica Group]
Length = 352
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
Query: 297 ERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
+R+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 151 QRLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSM 200
>gi|140084327|gb|ABO84930.1| Rhd6-like 1 [Physcomitrella patens]
Length = 762
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RAR+G A D S+A RVRRE+ISER+K LQ L+P +KV ML++ I+YVQ L+ Q+
Sbjct: 640 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKVD-MVTMLEKAISYVQCLEFQI 698
Query: 343 EFL 345
+ L
Sbjct: 699 KML 701
>gi|326514040|dbj|BAJ92170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
A+R +A H+L+ER RR++I+E+M+ LQ+LVP CNK T KA MLDE I Y++SLQ Q++
Sbjct: 233 AKRRRAAQVHNLSERRRRDRINEKMRALQELVPHCNK-TDKASMLDEAIEYLKSLQLQLQ 291
Query: 344 FL 345
+
Sbjct: 292 VM 293
>gi|42569994|ref|NP_182220.2| transcription factor PIL1 [Arabidopsis thaliana]
gi|75301051|sp|Q8L5W8.1|PIL1_ARATH RecName: Full=Transcription factor PIL1; AltName: Full=Basic
helix-loop-helix protein 124; Short=AtbHLH124;
Short=bHLH 124; AltName: Full=Protein PHYTOCHROME
INTERACTING FACTOR 3-LIKE 1; AltName: Full=Transcription
factor EN 110; AltName: Full=bHLH transcription factor
bHLH124
gi|22535492|dbj|BAC10689.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|61742691|gb|AAX55166.1| hypothetical protein At2g46970 [Arabidopsis thaliana]
gi|330255685|gb|AEC10779.1| transcription factor PIL1 [Arabidopsis thaliana]
Length = 416
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 18/119 (15%)
Query: 247 EDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRAR-----RGQATDSHSLAERVRR 301
E+ ++ S +++SD +KT+ +H R R R ++T+ H L ER RR
Sbjct: 195 EEESTYLSNNSDDESDDAKTQ------------VHARTRKPVTKRKRSTEVHKLYERKRR 242
Query: 302 EKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNM 360
++ +++M+ LQDL+P C K KA +LDE I Y+++LQ QV+ +SM + P L M
Sbjct: 243 DEFNKKMRALQDLLPNCYK-DDKASLLDEAIKYMRTLQLQVQMMSMGNGLIRPPTMLPM 300
>gi|357119457|ref|XP_003561456.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 334
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
RR +A + H+ +ER RR++I+E+MK LQ+LVP CNK + KA +LDE I Y++SLQ QV+
Sbjct: 140 RRARAAEVHNQSERRRRDRINEKMKALQELVPHCNK-SDKASILDEAIEYLKSLQLQVQI 198
Query: 345 LSM 347
+ M
Sbjct: 199 MWM 201
>gi|326497797|dbj|BAK05983.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 276 PKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYV 335
P+ ++R +A + H+L+E+ RR +I+E+MK LQ L+P NK T KA MLDE I Y+
Sbjct: 150 PRGGGGSGSKRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYL 208
Query: 336 QSLQRQVEFLSMKLAT-VNP-RMDLNMEALLSKDLFQSCG 373
+ LQ QV+ LSM+ +NP + +E + + +F + G
Sbjct: 209 KQLQLQVQMLSMRNGVYLNPSYLSGALEPVQASQMFAALG 248
>gi|226499484|ref|NP_001146943.1| protein SPATULA [Zea mays]
gi|195605542|gb|ACG24601.1| protein SPATULA [Zea mays]
gi|414585417|tpg|DAA35988.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414585418|tpg|DAA35989.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
gi|414585419|tpg|DAA35990.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 3
[Zea mays]
Length = 185
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
RR ++ + H+ +ER RR+KI+E++K LQ+L+P CNK T K MLDE I+Y++SLQ Q++
Sbjct: 14 TRRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNK-TDKVSMLDEAIDYLKSLQLQLQ 72
Query: 344 FLSM 347
L M
Sbjct: 73 MLVM 76
>gi|47497022|dbj|BAD19075.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
gi|47497231|dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
Length = 463
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 48/80 (60%), Gaps = 23/80 (28%)
Query: 290 TDSHSLAERV----------------------RREKISERMKFLQDLVPGCNKVTGKAVM 327
TD HS+AERV RRE+I+ERMK LQ+LVP NK T KA M
Sbjct: 220 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANK-TDKASM 278
Query: 328 LDEIINYVQSLQRQVEFLSM 347
LDEII+YV+ LQ QV+ LSM
Sbjct: 279 LDEIIDYVKFLQLQVKVLSM 298
>gi|28207148|gb|AAO37214.1| hypothetical protein [Arabidopsis thaliana]
Length = 416
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 18/119 (15%)
Query: 247 EDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRAR-----RGQATDSHSLAERVRR 301
E+ ++ S +++SD +KT+ +H R R R ++T+ H L ER RR
Sbjct: 195 EEESTYLSNNSDDESDDAKTQ------------VHARTRKPVTKRKRSTEVHKLYERKRR 242
Query: 302 EKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNM 360
++ +++M+ LQDL+P C K KA +LDE I Y+++LQ QV+ +SM + P L M
Sbjct: 243 DEFNKKMRALQDLLPNCYK-DDKASLLDEAIKYMRTLQLQVQMMSMGNGLIRPPTMLPM 300
>gi|225460440|ref|XP_002271390.1| PREDICTED: transcription factor bHLH80-like [Vitis vinifera]
Length = 251
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 49/66 (74%)
Query: 281 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 340
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E + YV+ LQ+
Sbjct: 174 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQ 233
Query: 341 QVEFLS 346
+++ LS
Sbjct: 234 KIQELS 239
>gi|168027850|ref|XP_001766442.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682351|gb|EDQ68770.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 879
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RAR+G A D S+A RVRRE+ISER+K LQ L+P +KV ML++ I YVQ L+ Q+
Sbjct: 755 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKVD-MVTMLEKAITYVQCLELQI 813
Query: 343 EFL 345
+ L
Sbjct: 814 KML 816
>gi|302810858|ref|XP_002987119.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
gi|300145016|gb|EFJ11695.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
Length = 85
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 46/62 (74%)
Query: 281 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 340
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T + MLDE + Y++ LQ+
Sbjct: 24 RLRAKRGCATHPRSIAERVRRTRISERMRRLQELVPNMDKQTNTSDMLDEAVEYMKFLQK 83
Query: 341 QV 342
QV
Sbjct: 84 QV 85
>gi|31043851|emb|CAD32238.1| BP-5 protein [Oryza sativa]
Length = 335
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 7/97 (7%)
Query: 264 SKTKDNSKPV--EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQ--DLVPGCN 319
++T+ S+ V +PP ARR +A + H+L+ER RR++I+E+M+ LQ +L+P CN
Sbjct: 142 ARTRSRSRLVARKPPAKM--TTARRSRAAEVHNLSERRRRDRINEKMRALQELELIPHCN 199
Query: 320 KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM 356
K T KA MLDE I Y++SLQ Q+ + M P M
Sbjct: 200 K-TDKASMLDEAIEYLKSLQLQLRVMWMGSGMAPPLM 235
>gi|224082612|ref|XP_002306764.1| predicted protein [Populus trichocarpa]
gi|222856213|gb|EEE93760.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
RR +A + H+L+ER RR++I+E+M+ LQ+L+P C K T KA MLDE I Y++SLQ Q++
Sbjct: 183 RRSRAAEVHNLSERRRRDRINEKMRALQELIPHCYK-TDKASMLDEAIEYLKSLQLQLQV 241
Query: 345 LSM 347
+ M
Sbjct: 242 MWM 244
>gi|359480799|ref|XP_002277966.2| PREDICTED: uncharacterized protein LOC100245665 [Vitis vinifera]
gi|296082405|emb|CBI21410.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 135 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 193
Query: 344 FLSMK 348
LSM+
Sbjct: 194 MLSMR 198
>gi|255538082|ref|XP_002510106.1| transcription factor, putative [Ricinus communis]
gi|223550807|gb|EEF52293.1| transcription factor, putative [Ricinus communis]
Length = 327
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 73/144 (50%), Gaps = 10/144 (6%)
Query: 211 SQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDN- 269
S++ T R R+ +Q+ + K+ P + K N E + + ++ S +DN
Sbjct: 159 SESCTKKKSRARRDVQKSR-KDEKPKKNQKFTPNNNEAEDRNAGPEGQSSSSCCSGEDNA 217
Query: 270 -------SKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVT 322
SK E RA RG ATD SL R RRE+I+ER++ LQ+LVP KV
Sbjct: 218 SQDSNGDSKVSEALNSKGKARAGRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVD 277
Query: 323 GKAVMLDEIINYVQSLQRQVEFLS 346
+ ML+E + YV+ LQ Q++ LS
Sbjct: 278 -ISTMLEEAVQYVKFLQLQIKLLS 300
>gi|326487850|dbj|BAJ89764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508951|dbj|BAJ86868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 281 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 340
H RR +A + H+ +ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ
Sbjct: 199 HGSKRRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNKAD-KASILDEAIEYLKSLQM 257
Query: 341 QVEFLSM 347
QV+ + M
Sbjct: 258 QVQVMWM 264
>gi|4678267|emb|CAB41175.1| putative protein [Arabidopsis thaliana]
Length = 137
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 40/47 (85%)
Query: 321 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDLNMEALLSKD 367
+ G A++LDEIIN+VQSLQRQVE LSM+LA VNPR+D N++ +L+ +
Sbjct: 1 IQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDFNLDTILASE 47
>gi|414879181|tpg|DAA56312.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 231
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRARRG AT S+AER RR +IS+R+K LQDLVP +K T + MLD + Y++ L+ Q
Sbjct: 152 VRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVEYIKELKDQ 211
Query: 342 VEFL 345
VE L
Sbjct: 212 VEKL 215
>gi|222619693|gb|EEE55825.1| hypothetical protein OsJ_04431 [Oryza sativa Japonica Group]
Length = 171
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 49/78 (62%)
Query: 268 DNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVM 327
D+ ++P RA+RG AT S+AER RR +IS+R+K LQDLVP +K T + M
Sbjct: 79 DDFLQLQPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDM 138
Query: 328 LDEIINYVQSLQRQVEFL 345
LD + Y++ LQ QVE L
Sbjct: 139 LDIAVTYIKELQGQVEKL 156
>gi|326505558|dbj|BAJ95450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 281 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 340
H RR +A + H+ +ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ
Sbjct: 190 HGSKRRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNKAD-KASILDEAIEYLKSLQM 248
Query: 341 QVEFLSM 347
QV+ + M
Sbjct: 249 QVQVMWM 255
>gi|242084068|ref|XP_002442459.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
gi|241943152|gb|EES16297.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
Length = 342
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 265 KTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGK 324
K N P P + R+ G+A H L E+ RR KI+ER+K LQ LVPGC+K + +
Sbjct: 153 KVMKNKAPAGGPSSW---RSHHGEA---HKLTEKRRRHKINERLKTLQQLVPGCSK-SNQ 205
Query: 325 AVMLDEIINYVQSLQRQVEFLSMKLA 350
A LD+ I+Y++SLQ+QV+ +S+ LA
Sbjct: 206 ASTLDQTIHYMKSLQQQVQAMSVGLA 231
>gi|296089503|emb|CBI39322.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 49/66 (74%)
Query: 281 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 340
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E + YV+ LQ+
Sbjct: 104 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQ 163
Query: 341 QVEFLS 346
+++ LS
Sbjct: 164 KIQELS 169
>gi|125554209|gb|EAY99814.1| hypothetical protein OsI_21804 [Oryza sativa Indica Group]
Length = 315
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R +A + H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 157
Query: 344 FLSMK 348
LSM+
Sbjct: 158 MLSMR 162
>gi|55296133|dbj|BAD67851.1| basic helix-loop-helix protein SPATULA-like [Oryza sativa Japonica
Group]
gi|125596157|gb|EAZ35937.1| hypothetical protein OsJ_20240 [Oryza sativa Japonica Group]
Length = 315
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R +A + H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 157
Query: 344 FLSMK 348
LSM+
Sbjct: 158 MLSMR 162
>gi|357113061|ref|XP_003558323.1| PREDICTED: transcription factor PIF5-like [Brachypodium distachyon]
Length = 418
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 281 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 340
H RR +A + H+ +ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ
Sbjct: 228 HGSKRRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNKAD-KASILDEAIEYLKSLQM 286
Query: 341 QVEFLSM 347
Q++ + M
Sbjct: 287 QLQIMWM 293
>gi|242084066|ref|XP_002442458.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
gi|241943151|gb|EES16296.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
Length = 340
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 51/69 (73%), Gaps = 4/69 (5%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
R+ G+A H+L E+ RR KI+ER+K LQ LVPGC+K + +A LD+ I+Y++SLQ QV
Sbjct: 162 RSHHGEA---HNLTEKRRRHKINERLKTLQQLVPGCSK-SNQASTLDQTIHYMKSLQHQV 217
Query: 343 EFLSMKLAT 351
+ +S+ LA+
Sbjct: 218 QAMSVGLAS 226
>gi|168039365|ref|XP_001772168.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676499|gb|EDQ62981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 945
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RAR+G A D S+A RVRRE+ISER+K LQ L+P +KV ML++ I+YVQ L+ Q+
Sbjct: 823 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKVD-MVTMLEKAISYVQCLEFQI 881
Query: 343 EFL 345
+ L
Sbjct: 882 KML 884
>gi|15451582|gb|AAK98706.1|AC069158_18 Putative SPATULA [Oryza sativa Japonica Group]
Length = 298
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 59/93 (63%), Gaps = 8/93 (8%)
Query: 256 QDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLV 315
+ E SS+++ ++P P R +R +A + H+L+E+ RR +I+E+MK LQ L+
Sbjct: 7 ESEEALGSSESEQPTRPARP-------RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLI 59
Query: 316 PGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMK 348
P +K T KA MLD+ I Y++ LQ QV+ LSM+
Sbjct: 60 PNSSK-TDKASMLDDAIEYLKQLQLQVQMLSMR 91
>gi|125541527|gb|EAY87922.1| hypothetical protein OsI_09345 [Oryza sativa Indica Group]
Length = 320
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 59/93 (63%), Gaps = 8/93 (8%)
Query: 256 QDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLV 315
+ E SS+++ ++P P R +R +A + H+L+E+ RR +I+E+MK LQ L+
Sbjct: 29 ESEEALGSSESEQPTRPARP-------RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLI 81
Query: 316 PGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMK 348
P +K T KA MLD+ I Y++ LQ QV+ LSM+
Sbjct: 82 PNSSK-TDKASMLDDAIEYLKQLQLQVQMLSMR 113
>gi|125584067|gb|EAZ24998.1| hypothetical protein OsJ_08778 [Oryza sativa Japonica Group]
Length = 320
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 59/93 (63%), Gaps = 8/93 (8%)
Query: 256 QDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLV 315
+ E SS+++ ++P P R +R +A + H+L+E+ RR +I+E+MK LQ L+
Sbjct: 29 ESEEALGSSESEQPTRPARP-------RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLI 81
Query: 316 PGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMK 348
P +K T KA MLD+ I Y++ LQ QV+ LSM+
Sbjct: 82 PNSSK-TDKASMLDDAIEYLKQLQLQVQMLSMR 113
>gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]
Length = 386
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R +A + H+++E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 154 SKRSRAAEVHNMSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 212
Query: 344 FLSMK 348
LSM+
Sbjct: 213 MLSMR 217
>gi|20161601|dbj|BAB90521.1| B1065G12.3 [Oryza sativa Japonica Group]
Length = 234
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 49/78 (62%)
Query: 268 DNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVM 327
D+ ++P RA+RG AT S+AER RR +IS+R+K LQDLVP +K T + M
Sbjct: 142 DDFLQLQPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDM 201
Query: 328 LDEIINYVQSLQRQVEFL 345
LD + Y++ LQ QVE L
Sbjct: 202 LDIAVTYIKELQGQVEKL 219
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 66/111 (59%), Gaps = 9/111 (8%)
Query: 238 DPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAE 297
+P ++ P S S Q++ S+ +SK PP+ ++R +A + H+L+E
Sbjct: 49 NPSTISYPPPHFTSSSSAQNDEGSE----LPSSKAAPPPRS----SSKRSRAAEFHNLSE 100
Query: 298 RVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMK 348
+ RR KI+E++K LQ+L+P NK T KA MLDE I Y++ LQ QV+ L ++
Sbjct: 101 KRRRSKINEKLKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLMVR 150
>gi|222080623|gb|ACM41588.1| bHLH transcription factor MYC5 [Catharanthus roseus]
Length = 321
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 142 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 200
Query: 344 FLSMK 348
L+M+
Sbjct: 201 MLTMR 205
>gi|356562241|ref|XP_003549380.1| PREDICTED: uncharacterized protein LOC100780907 [Glycine max]
Length = 353
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
RA RG ATD SL R RRE+I+ER++ LQ+LVP KV + ML+E +NYV+ LQ Q
Sbjct: 264 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVNYVKFLQLQ 322
Query: 342 VEFLS 346
++ LS
Sbjct: 323 IKLLS 327
>gi|356553998|ref|XP_003545337.1| PREDICTED: uncharacterized protein LOC100797500 [Glycine max]
Length = 350
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Query: 243 AENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRRE 302
A N E++ + D S S+ ++D++ RA RG ATD SL R RRE
Sbjct: 222 ASNGEEAEETNAGSDGQSSSSNMSEDDNISKSALNSNGKTRASRGSATDPQSLYARKRRE 281
Query: 303 KISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 346
+I+ER++ LQ+LVP KV + ML+E +NYV+ LQ Q++ LS
Sbjct: 282 RINERLRILQNLVPNGTKVD-ISTMLEEAVNYVKFLQLQIKLLS 324
>gi|339716186|gb|AEJ88332.1| putative MYC protein, partial [Tamarix hispida]
Length = 181
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 240 KVVAENPEDSNSMRSKQDENKSDSSKTKDNSK-PVEPPKDYIHVRARRGQATDSHSLAER 298
++ + P D N SK D +T N+K P +P KDYIHVRARRGQATDSHSLAER
Sbjct: 118 RLKSSGPNDEN-QNSKVDAELGTGKETMQNTKSPPDPSKDYIHVRARRGQATDSHSLAER 176
Query: 299 VRREK 303
RREK
Sbjct: 177 ARREK 181
>gi|326519825|dbj|BAK00285.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K T + MLD ++Y++ LQ Q
Sbjct: 300 VRAKRGCATHPRSIAERERRTRISKRLRRLQDLVPNMDKQTNTSDMLDIAVDYIKVLQDQ 359
Query: 342 VEFL 345
+E L
Sbjct: 360 IEKL 363
>gi|242066894|ref|XP_002454736.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
gi|241934567|gb|EES07712.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
Length = 277
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 59/98 (60%), Gaps = 8/98 (8%)
Query: 251 SMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKF 310
SM + + + S D ++P P R +R +A + H+L+E+ RR +I+E+MK
Sbjct: 16 SMATVYESEDALGSSESDPARPARP-------RGKRSRAAEVHNLSEKRRRSRINEKMKA 68
Query: 311 LQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMK 348
LQ L+P +K T KA MLD+ I Y++ LQ QV+ LSM+
Sbjct: 69 LQTLIPNSSK-TDKASMLDDAIEYLKQLQLQVQMLSMR 105
>gi|323388933|gb|ADX60271.1| bHLH transcription factor [Oryza sativa Japonica Group]
gi|323388951|gb|ADX60280.1| HLH transcription factor [Oryza sativa Japonica Group]
Length = 387
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 49/78 (62%)
Query: 268 DNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVM 327
D+ ++P RA+RG AT S+AER RR +IS+R+K LQDLVP +K T + M
Sbjct: 295 DDFLQLQPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDM 354
Query: 328 LDEIINYVQSLQRQVEFL 345
LD + Y++ LQ QVE L
Sbjct: 355 LDIAVTYIKELQGQVEKL 372
>gi|115441653|ref|NP_001045106.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|56784863|dbj|BAD82103.1| putative helix-loop-helix protein 1A [Oryza sativa Japonica Group]
gi|113534637|dbj|BAF07020.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|215687014|dbj|BAG90828.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189543|gb|EEC71970.1| hypothetical protein OsI_04807 [Oryza sativa Indica Group]
Length = 387
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 49/78 (62%)
Query: 268 DNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVM 327
D+ ++P RA+RG AT S+AER RR +IS+R+K LQDLVP +K T + M
Sbjct: 295 DDFLQLQPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDM 354
Query: 328 LDEIINYVQSLQRQVEFL 345
LD + Y++ LQ QVE L
Sbjct: 355 LDIAVTYIKELQGQVEKL 372
>gi|20127093|gb|AAM10959.1|AF488616_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 352
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 256 QDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLV 315
QD DSS +D+ P + RA RG ATD SL R RRE+I+ER++ LQ+LV
Sbjct: 242 QDGGGEDSSSKEDD--PSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLV 299
Query: 316 PGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 346
P KV + ML+E ++YV+ LQ Q++ LS
Sbjct: 300 PNGTKVD-ISTMLEEAVHYVKFLQLQIKLLS 329
>gi|219363643|ref|NP_001136510.1| uncharacterized protein LOC100216625 [Zea mays]
gi|194688606|gb|ACF78387.1| unknown [Zea mays]
gi|223949339|gb|ACN28753.1| unknown [Zea mays]
gi|413939377|gb|AFW73928.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 280
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 8/85 (9%)
Query: 264 SKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 323
S D ++P P R +R +A + H+L+E+ RR +I+E+MK LQ L+P +K T
Sbjct: 28 SSESDPARPARP-------RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TD 79
Query: 324 KAVMLDEIINYVQSLQRQVEFLSMK 348
KA MLD+ I Y++ LQ QV+ LSM+
Sbjct: 80 KASMLDDAIEYLKHLQLQVQMLSMR 104
>gi|413939376|gb|AFW73927.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 279
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 8/85 (9%)
Query: 264 SKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 323
S D ++P P R +R +A + H+L+E+ RR +I+E+MK LQ L+P +K T
Sbjct: 28 SSESDPARPARP-------RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TD 79
Query: 324 KAVMLDEIINYVQSLQRQVEFLSMK 348
KA MLD+ I Y++ LQ QV+ LSM+
Sbjct: 80 KASMLDDAIEYLKHLQLQVQMLSMR 104
>gi|195639614|gb|ACG39275.1| hypothetical protein [Zea mays]
Length = 282
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 8/85 (9%)
Query: 264 SKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 323
S D ++P P R +R +A + H+L+E+ RR +I+E+MK LQ L+P +K T
Sbjct: 30 SSESDPARPARP-------RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TD 81
Query: 324 KAVMLDEIINYVQSLQRQVEFLSMK 348
KA MLD+ I Y++ LQ QV+ LSM+
Sbjct: 82 KASMLDDAIEYLKHLQLQVQMLSMR 106
>gi|297798526|ref|XP_002867147.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
gi|297312983|gb|EFH43406.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Query: 256 QDENKSDSS-KTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDL 314
QD DSS K D SK + RA RG ATD SL R RRE+I+ER++ LQ+L
Sbjct: 241 QDGGGEDSSSKEDDASKALNLNG---KTRASRGAATDPQSLYARKRRERINERLRILQNL 297
Query: 315 VPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 346
VP KV + ML+E ++YV+ LQ Q++ LS
Sbjct: 298 VPNGTKVD-ISTMLEEAVHYVKFLQLQIKLLS 328
>gi|357126351|ref|XP_003564851.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 373
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K T + MLD ++Y++ LQ Q
Sbjct: 295 VRAKRGCATHPRSIAERERRTRISKRLRKLQDLVPNMDKQTNTSDMLDIAVDYIKVLQDQ 354
Query: 342 VEFL 345
+E L
Sbjct: 355 IEKL 358
>gi|357165982|ref|XP_003580559.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 198
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
RR ++ D H+ +ER RR++I+E++K LQ+L+P C K T K MLDE I+Y++SLQ Q++
Sbjct: 17 RRSRSADFHNFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQM 75
Query: 345 LSM 347
L M
Sbjct: 76 LVM 78
>gi|140084334|gb|ABO84931.1| Rhd6-like 2 [Physcomitrella patens]
Length = 173
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RAR+G A D S+A RVRRE+ISER+K LQ L+P +KV ML++ I YVQ L+ Q+
Sbjct: 49 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKVD-MVTMLEKAITYVQCLELQI 107
Query: 343 EFL 345
+ L
Sbjct: 108 KML 110
>gi|30689839|ref|NP_195114.2| transcription factor bHLH85 [Arabidopsis thaliana]
gi|75298259|sp|Q84WK0.1|BH085_ARATH RecName: Full=Transcription factor bHLH85; AltName: Full=Basic
helix-loop-helix protein 85; Short=AtbHLH85; Short=bHLH
85; AltName: Full=Transcription factor EN 115; AltName:
Full=bHLH transcription factor bHLH085
gi|27808578|gb|AAO24569.1| At4g33880 [Arabidopsis thaliana]
gi|110736194|dbj|BAF00068.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332660887|gb|AEE86287.1| transcription factor bHLH85 [Arabidopsis thaliana]
Length = 352
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 256 QDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLV 315
QD DSS +D+ P + RA RG ATD SL R RRE+I+ER++ LQ+LV
Sbjct: 242 QDGGGEDSSSKEDD--PSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLV 299
Query: 316 PGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 346
P KV + ML+E ++YV+ LQ Q++ LS
Sbjct: 300 PNGTKVD-ISTMLEEAVHYVKFLQLQIKLLS 329
>gi|3297812|emb|CAA19870.1| putative protein [Arabidopsis thaliana]
gi|7270337|emb|CAB80105.1| putative protein [Arabidopsis thaliana]
Length = 349
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 256 QDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLV 315
QD DSS +D+ P + RA RG ATD SL R RRE+I+ER++ LQ+LV
Sbjct: 239 QDGGGEDSSSKEDD--PSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLV 296
Query: 316 PGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 346
P KV + ML+E ++YV+ LQ Q++ LS
Sbjct: 297 PNGTKVD-ISTMLEEAVHYVKFLQLQIKLLS 326
>gi|449531452|ref|XP_004172700.1| PREDICTED: uncharacterized protein LOC101229339 [Cucumis sativus]
Length = 379
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R ++ + H+++E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 192 SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 250
Query: 344 FLSMK 348
LSM+
Sbjct: 251 MLSMR 255
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 10/87 (11%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
R+ RG ATD S+ R RREKI+ER+K LQ+LVP KV + ML+E + YV+ LQ Q+
Sbjct: 247 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVD-ISTMLEEAVQYVKFLQLQI 305
Query: 343 EFLS---------MKLATVNPRMDLNM 360
+ LS + +N +DLN+
Sbjct: 306 KLLSSDDLWMYAPIAFNGMNIGLDLNL 332
>gi|224124904|ref|XP_002319451.1| predicted protein [Populus trichocarpa]
gi|222857827|gb|EEE95374.1| predicted protein [Populus trichocarpa]
Length = 59
Score = 67.0 bits (162), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 48/59 (81%), Gaps = 1/59 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
+RG+A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA MLDE I Y+++LQ QV+
Sbjct: 1 KRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 58
>gi|302781847|ref|XP_002972697.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
gi|300159298|gb|EFJ25918.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
Length = 442
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RAR+G A D S+A R RRE+IS+R+K LQ+LVP KV ML++ INYV+ LQ QV
Sbjct: 359 RARQGSANDPQSIAARHRRERISDRLKILQELVPNSTKV-DLVTMLEKAINYVKFLQLQV 417
Query: 343 EFLS 346
+ L+
Sbjct: 418 KVLT 421
>gi|255572912|ref|XP_002527387.1| DNA binding protein, putative [Ricinus communis]
gi|223533239|gb|EEF34994.1| DNA binding protein, putative [Ricinus communis]
Length = 377
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 271 KPVEPPKDYI--HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVML 328
K + P+D + +RA+RG AT S+AER RR +IS R+K LQDLVP +K T A ML
Sbjct: 286 KLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGRLKKLQDLVPNMDKQTSYADML 345
Query: 329 DEIINYVQSLQRQVEFLSMKL 349
D + +++ LQ +V+ L +L
Sbjct: 346 DLAVQHIKGLQGEVQKLHKEL 366
>gi|302798757|ref|XP_002981138.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
gi|300151192|gb|EFJ17839.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
Length = 85
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R +A + H+L+ER RR++I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ Q++
Sbjct: 16 SKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNK-TDKASMLDEAIEYLKMLQLQLQ 74
Query: 344 FLS 346
LS
Sbjct: 75 VLS 77
>gi|255565242|ref|XP_002523613.1| conserved hypothetical protein [Ricinus communis]
gi|223537175|gb|EEF38808.1| conserved hypothetical protein [Ricinus communis]
Length = 406
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 62/98 (63%), Gaps = 8/98 (8%)
Query: 258 ENKSDSSKTKDNSKPVEPPKDYIHVRA-------RRGQATDSHSLAERVRREKISERMKF 310
EN++D ++ + +E + + +A +R +A + H+L+E+ RR +I+E+MK
Sbjct: 124 ENETDHECDCESEEGLEALIEEVQTKAAPPRSSSKRSRAAEVHNLSEKRRRSRINEKMKA 183
Query: 311 LQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMK 348
LQ+L+P NK T KA MLDE I Y++ LQ QV+ LS++
Sbjct: 184 LQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSLR 220
>gi|147866312|emb|CAN79863.1| hypothetical protein VITISV_021999 [Vitis vinifera]
Length = 346
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 281 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 340
RA RG ATD SL R RRE+I+ER+K LQ+LVP KV + ML+E + YV+ LQ
Sbjct: 254 KARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVD-ISTMLEEAVEYVKFLQL 312
Query: 341 QVEFLS 346
Q++ LS
Sbjct: 313 QIKLLS 318
>gi|226496303|ref|NP_001147052.1| protein SPATULA [Zea mays]
gi|195606902|gb|ACG25281.1| protein SPATULA [Zea mays]
Length = 215
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
RR ++ D H+ +ER RR++I+E+++ LQ+L+P C K T K MLDE I+Y++SLQ Q++
Sbjct: 17 RRSRSADFHNFSERRRRDRINEKLRALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQM 75
Query: 345 LSM 347
L M
Sbjct: 76 LVM 78
>gi|388520611|gb|AFK48367.1| unknown [Lotus japonicus]
Length = 251
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISE++K L+ L P +K T A MLD + Y++ LQ Q
Sbjct: 167 IRAKRGFATHPRSVAERVRRTRISEKIKKLEGLFPKSDKQTSTADMLDSAVEYIKDLQEQ 226
Query: 342 VEFLS 346
V+ L+
Sbjct: 227 VKTLT 231
>gi|296083058|emb|CBI22462.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
RA RG ATD SL R RRE+I+ER+K LQ+LVP KV + ML+E + YV+ LQ Q
Sbjct: 259 ARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVD-ISTMLEEAVEYVKFLQLQ 317
Query: 342 VEFLS 346
++ LS
Sbjct: 318 IKLLS 322
>gi|359478054|ref|XP_002268535.2| PREDICTED: transcription factor bHLH128 [Vitis vinifera]
Length = 357
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 271 KPVEPPKDYI--HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVML 328
K ++ P+D + VRA+RG AT S+AER RR +IS ++K LQDLVP +K T A ML
Sbjct: 266 KLLQVPEDSVPCKVRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADML 325
Query: 329 DEIINYVQSLQRQVEFLSMKL 349
D + +++ LQ +V+ L+ +L
Sbjct: 326 DLAVQHIKGLQNEVQKLNKEL 346
>gi|240256101|ref|NP_194609.5| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
gi|378405153|sp|Q9SVU7.2|BH056_ARATH RecName: Full=Putative transcription factor bHLH056; AltName:
Full=Basic helix-loop-helix protein 56; Short=AtbHLH56;
Short=bHLH 56; AltName: Full=Transcription factor EN
106; AltName: Full=bHLH transcription factor bHLH056
gi|332660146|gb|AEE85546.1| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
Length = 445
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
+R + + H+LAER RREKI+E+MK LQ L+P CNK T K LD+ I YV+SLQ Q++
Sbjct: 252 KRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKST-KVSTLDDAIEYVKSLQSQIQ 309
>gi|225428979|ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
Length = 345
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
RA RG ATD SL R RRE+I+ER+K LQ+LVP KV + ML+E + YV+ LQ Q
Sbjct: 254 ARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVD-ISTMLEEAVEYVKFLQLQ 312
Query: 342 VEFLS 346
++ LS
Sbjct: 313 IKLLS 317
>gi|297745167|emb|CBI39159.3| unnamed protein product [Vitis vinifera]
Length = 410
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 271 KPVEPPKDYI--HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVML 328
K ++ P+D + VRA+RG AT S+AER RR +IS ++K LQDLVP +K T A ML
Sbjct: 319 KLLQVPEDSVPCKVRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADML 378
Query: 329 DEIINYVQSLQRQVEFLSMKL 349
D + +++ LQ +V+ L+ +L
Sbjct: 379 DLAVQHIKGLQNEVQKLNKEL 399
>gi|168024155|ref|XP_001764602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684180|gb|EDQ70584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 16/163 (9%)
Query: 197 ADSKEGSSLSEQ---ITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMR 253
A S++G+S Q I T+T S+ R S + PK P T + +E E
Sbjct: 513 ASSEKGASHCTQHLDIQEPTITSSSGRYATSAEPPKE---PVTGTKRKSSEREEPECQSE 569
Query: 254 SKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQD 313
+DE+ K + +R +A + H+ +ER RR++I+E+M+ LQ+
Sbjct: 570 DMEDESVDTKQKPATTGRVST---------TKRSRAAEVHNQSERRRRDRINEKMRALQE 620
Query: 314 LVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM 356
L+P NK T KA MLDE I Y++ LQ Q++ +S++ P M
Sbjct: 621 LIPNSNK-TDKASMLDEAIEYLKMLQLQLQMMSIRTGMTLPPM 662
>gi|302801726|ref|XP_002982619.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
gi|300149718|gb|EFJ16372.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
Length = 85
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R +A + H+L+ER RR++I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ Q++
Sbjct: 16 SKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNK-TDKASMLDEAIEYLKMLQLQLQ 74
Query: 344 FLS 346
LS
Sbjct: 75 VLS 77
>gi|116831075|gb|ABK28492.1| unknown [Arabidopsis thaliana]
Length = 329
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 206 SEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMR------------ 253
S++ T T TD N R K+ + K E ++ E E + R
Sbjct: 149 SKKRTRATTTDKNKRANKARRSQKCVEMSGENENSGEEEYTEKAAGKRKTKPLKPQKTCC 208
Query: 254 SKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQD 313
S + N D+ +K++ + + RA RG ATD SL R RRE+I+ER++ LQ
Sbjct: 209 SDDESNGGDTFLSKEDGEDSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQH 268
Query: 314 LVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 346
LVP KV + ML+E + YV+ LQ Q++ LS
Sbjct: 269 LVPNGTKVD-ISTMLEEAVQYVKFLQLQIKLLS 300
>gi|449469332|ref|XP_004152375.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
gi|449530384|ref|XP_004172175.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 341
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 75/143 (52%), Gaps = 19/143 (13%)
Query: 212 QTVTDSNPRKRKSIQRPKAKETPPT--SDPKVVAENPEDSNSMRSKQDENKSD------S 263
Q++ D KR R +K + + ++V+ N + ++S S+ D N++ +
Sbjct: 179 QSLLDVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNEAQENNGGIT 238
Query: 264 SKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 323
S + N KP RA RG ATD SL R RRE+I+ER++ LQ LVP KV
Sbjct: 239 SSSTSNGKP----------RASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVD- 287
Query: 324 KAVMLDEIINYVQSLQRQVEFLS 346
+ ML+E + YV+ LQ Q++ LS
Sbjct: 288 ISTMLEEAVQYVKFLQLQIKLLS 310
>gi|356534283|ref|XP_003535686.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 270 SKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLD 329
SK PP + RA G ATD SL R RRE+I+ER++ LQ+LVP KV + ML+
Sbjct: 252 SKDPAPPNLHRKSRATTGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLE 310
Query: 330 EIINYVQSLQRQVEFLS 346
E + YV+ LQ Q++ LS
Sbjct: 311 EAVQYVKFLQLQIKLLS 327
>gi|42569042|ref|NP_179083.2| transcription factor bHLH84 [Arabidopsis thaliana]
gi|75296240|sp|Q7XHI9.1|BH084_ARATH RecName: Full=Transcription factor bHLH84; AltName: Full=Basic
helix-loop-helix protein 84; Short=AtbHLH84; Short=bHLH
84; AltName: Full=bHLH transcription factor bHLH084
gi|33111969|emb|CAE12171.1| putative bHLH084 transcription factor [Arabidopsis thaliana]
gi|91806168|gb|ABE65812.1| basic helix-loop-helix protein/bHLH protein [Arabidopsis thaliana]
gi|330251237|gb|AEC06331.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 328
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 206 SEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMR------------ 253
S++ T T TD N R K+ + K E ++ E E + R
Sbjct: 149 SKKRTRATTTDKNKRANKARRSQKCVEMSGENENSGEEEYTEKAAGKRKTKPLKPQKTCC 208
Query: 254 SKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQD 313
S + N D+ +K++ + + RA RG ATD SL R RRE+I+ER++ LQ
Sbjct: 209 SDDESNGGDTFLSKEDGEDSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQH 268
Query: 314 LVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 346
LVP KV + ML+E + YV+ LQ Q++ LS
Sbjct: 269 LVPNGTKVD-ISTMLEEAVQYVKFLQLQIKLLS 300
>gi|77556960|gb|ABA99756.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125537220|gb|EAY83708.1| hypothetical protein OsI_38930 [Oryza sativa Indica Group]
gi|125579902|gb|EAZ21048.1| hypothetical protein OsJ_36693 [Oryza sativa Japonica Group]
Length = 304
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 10/88 (11%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RA RG ATD SL R RRE+I+ER+K LQ+LVP KV + ML+E ++YV+ LQ Q+
Sbjct: 217 RAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQI 275
Query: 343 EFLS---------MKLATVNPRMDLNME 361
+ LS + +N +DLN++
Sbjct: 276 KLLSSDEMWMYAPIAYNGMNIGLDLNID 303
>gi|34393609|dbj|BAC83262.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|50509377|dbj|BAD30932.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|125600907|gb|EAZ40483.1| hypothetical protein OsJ_24937 [Oryza sativa Japonica Group]
Length = 279
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 273 VEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEII 332
+P + RA RG ATD SL R RRE+I+ER++ LQ+LVP KV + ML+E +
Sbjct: 178 AKPSSKKMGTRANRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAV 236
Query: 333 NYVQSLQRQVEFLS 346
YV+ LQ Q++ LS
Sbjct: 237 QYVKFLQLQIKLLS 250
>gi|224067212|ref|XP_002302411.1| predicted protein [Populus trichocarpa]
gi|222844137|gb|EEE81684.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
RA RG ATD SL R RRE+I+ER+K LQ+LVP KV + ML+E ++YV LQ Q
Sbjct: 272 TRATRGAATDPQSLYARKRRERINERLKILQNLVPNGTKVD-ISTMLEEAVHYVNFLQLQ 330
Query: 342 VEFLS 346
++ LS
Sbjct: 331 IKLLS 335
>gi|116785394|gb|ABK23705.1| unknown [Picea sitchensis]
Length = 333
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 152 SKRSRAAEVHNLSEKRRRNRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKKLQLQVQ 210
Query: 344 FLSMK 348
LS +
Sbjct: 211 MLSAR 215
>gi|225458820|ref|XP_002283302.1| PREDICTED: transcription factor bHLH84 [Vitis vinifera]
Length = 380
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
RA RG ATD SL R RRE+I+ER++ LQ+LVP KV + ML+E ++YV+ LQ Q
Sbjct: 287 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQ 345
Query: 342 VEFLS-----MKLATVNPRMDLNMEALLSK 366
++ LS M MD+ ++ L K
Sbjct: 346 IKLLSSDDMWMYAPIAYNGMDIGLQNLHQK 375
>gi|125558995|gb|EAZ04531.1| hypothetical protein OsI_26681 [Oryza sativa Indica Group]
Length = 279
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 273 VEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEII 332
+P + RA RG ATD SL R RRE+I+ER++ LQ+LVP KV + ML+E +
Sbjct: 178 AKPSSKKMGTRANRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAV 236
Query: 333 NYVQSLQRQVEFLS 346
YV+ LQ Q++ LS
Sbjct: 237 QYVKFLQLQIKLLS 250
>gi|147805319|emb|CAN71946.1| hypothetical protein VITISV_007899 [Vitis vinifera]
Length = 380
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
RA RG ATD SL R RRE+I+ER++ LQ+LVP KV + ML+E ++YV+ LQ Q
Sbjct: 287 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQ 345
Query: 342 VEFLS-----MKLATVNPRMDLNMEALLSK 366
++ LS M MD+ ++ L K
Sbjct: 346 IKLLSSDDMWMYAPIAYNGMDIGLQNLHQK 375
>gi|242092116|ref|XP_002436548.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
gi|241914771|gb|EER87915.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
Length = 291
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 289 ATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMK 348
A + H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ LSM+
Sbjct: 84 AAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSMR 142
>gi|255541166|ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
gi|223548827|gb|EEF50316.1| DNA binding protein, putative [Ricinus communis]
Length = 465
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 55/95 (57%), Gaps = 14/95 (14%)
Query: 257 DENKS-----DSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFL 311
DEN S D K K N K V +R +A H+ +ER RR+KI++RMK L
Sbjct: 255 DENDSVCHSDDDDKQKANGKS--------SVSTKRSRAAAIHNQSERKRRDKINQRMKTL 306
Query: 312 QDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 346
Q LVP +K T KA MLDE+I Y++ LQ QV+ +S
Sbjct: 307 QKLVPNSSK-TDKASMLDEVIEYLKQLQAQVQMMS 340
>gi|356503978|ref|XP_003520776.1| PREDICTED: uncharacterized protein LOC100804665 [Glycine max]
Length = 513
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 65/112 (58%), Gaps = 12/112 (10%)
Query: 236 TSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSL 295
++DP + ED+ + S D D K +D R RR + H+L
Sbjct: 285 SNDPNLGLRKHEDTETYLSDNDGEPEDMVK-----------QDRDGNRVRRIRNPVVHNL 333
Query: 296 AERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
+E+ RREKI+++M+ L++L+P CNKV KA MLD+ I+Y+++L+ Q++ +SM
Sbjct: 334 SEKKRREKINKKMRTLKELIPNCNKV-DKASMLDDAIDYLKTLKLQLQIMSM 384
>gi|15240202|ref|NP_201512.1| transcription factor ALC [Arabidopsis thaliana]
gi|75309083|sp|Q9FHA2.1|ALC_ARATH RecName: Full=Transcription factor ALC; AltName: Full=Basic
helix-loop-helix protein 73; Short=AtbHLH73; Short=bHLH
73; AltName: Full=Protein ALCATRAZ; AltName:
Full=Transcription factor EN 98; AltName: Full=bHLH
transcription factor bHLH073
gi|10177598|dbj|BAB10945.1| unnamed protein product [Arabidopsis thaliana]
gi|114050687|gb|ABI49493.1| At5g67110 [Arabidopsis thaliana]
gi|332010918|gb|AED98301.1| transcription factor ALC [Arabidopsis thaliana]
Length = 210
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 57/103 (55%), Gaps = 11/103 (10%)
Query: 293 HSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS------ 346
H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ L+
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 156
Query: 347 ---MKLATVNPRMDLNMEALLSKDL-FQSCGYVQHSLYPGDCS 385
M+L V P + L +DL ++ HSL P S
Sbjct: 157 LNPMRLPQVPPPTHTRINETLEQDLNLETLLAAPHSLEPAKTS 199
>gi|51970054|dbj|BAD43719.1| putative bHLH transcription factor (bHLH073/ALCATRAZ) [Arabidopsis
thaliana]
Length = 210
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 57/103 (55%), Gaps = 11/103 (10%)
Query: 293 HSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS------ 346
H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ L+
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 156
Query: 347 ---MKLATVNPRMDLNMEALLSKDL-FQSCGYVQHSLYPGDCS 385
M+L V P + L +DL ++ HSL P S
Sbjct: 157 LNPMRLPQVPPPTHTRINETLEQDLNLETLLAAPHSLEPAKTS 199
>gi|242055293|ref|XP_002456792.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
gi|241928767|gb|EES01912.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
Length = 361
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRA+RG AT S+AER RR +IS+R+K LQDLVP +K T + MLD ++Y++ L+ +
Sbjct: 281 VRAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELKDR 340
Query: 342 VEFL 345
VE L
Sbjct: 341 VEKL 344
>gi|224131550|ref|XP_002321112.1| predicted protein [Populus trichocarpa]
gi|222861885|gb|EEE99427.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 271 KPVEPPKDYI--HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVML 328
K ++ P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T A ML
Sbjct: 250 KLLQIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKTLQDLVPNMDKQTSYADML 309
Query: 329 DEIINYVQSLQRQVEFLSMKL 349
+ + +++ LQ +VE L +L
Sbjct: 310 ELAVKHIKGLQNEVEKLHKEL 330
>gi|356576919|ref|XP_003556577.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 286
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 271 KPVEPPKDYI--HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVML 328
K + P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T A ML
Sbjct: 195 KLLHIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADML 254
Query: 329 DEIINYVQSLQRQVEFLSMKL 349
D + +++ LQ QV+ L ++
Sbjct: 255 DLAVQHIKGLQTQVQKLHKEM 275
>gi|21536863|gb|AAM61195.1| unknown [Arabidopsis thaliana]
Length = 210
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 57/103 (55%), Gaps = 11/103 (10%)
Query: 293 HSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS------ 346
H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ L+
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 156
Query: 347 ---MKLATVNPRMDLNMEALLSKDL-FQSCGYVQHSLYPGDCS 385
M+L V P + L +DL ++ HSL P S
Sbjct: 157 LNPMRLPQVPPPTHTRINETLEQDLNLETLLAAPHSLEPAKTS 199
>gi|226493752|ref|NP_001140849.1| uncharacterized protein LOC100272925 [Zea mays]
gi|194690530|gb|ACF79349.1| unknown [Zea mays]
gi|194701428|gb|ACF84798.1| unknown [Zea mays]
gi|223949911|gb|ACN29039.1| unknown [Zea mays]
gi|413919543|gb|AFW59475.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 214
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
RR ++ D H+ +ER RR++I+E+++ LQ+L+P C K T K MLDE I+Y++SLQ Q++
Sbjct: 16 RRSRSADFHNFSERRRRDRINEKLRALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQM 74
Query: 345 LSM 347
L M
Sbjct: 75 LVM 77
>gi|242074344|ref|XP_002447108.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
gi|241938291|gb|EES11436.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
Length = 188
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
RR ++ + H+ +ER RR++I+E++K LQ+L+P C K T K MLDE I+Y++SLQ Q++
Sbjct: 15 TRRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQ 73
Query: 344 FLSM 347
L M
Sbjct: 74 MLVM 77
>gi|307135852|gb|ADN33721.1| serine/threonine-protein kinase [Cucumis melo subsp. melo]
Length = 842
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R ++ + H+++E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 192 SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 250
Query: 344 FLSMK 348
LSM+
Sbjct: 251 MLSMR 255
>gi|224103739|ref|XP_002313175.1| predicted protein [Populus trichocarpa]
gi|222849583|gb|EEE87130.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
RA RG ATD SL R RRE+I+ER++ LQ LVP KV + ML+E + YV+ LQ Q
Sbjct: 264 TRASRGAATDPQSLYARKRRERINERLRILQTLVPNGTKVD-ISTMLEEAVQYVKFLQLQ 322
Query: 342 VEFLS 346
++ LS
Sbjct: 323 IKLLS 327
>gi|449450231|ref|XP_004142867.1| PREDICTED: uncharacterized protein LOC101203008 [Cucumis sativus]
Length = 842
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R ++ + H+++E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 192 SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 250
Query: 344 FLSMK 348
LSM+
Sbjct: 251 MLSMR 255
>gi|302770807|ref|XP_002968822.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
gi|300163327|gb|EFJ29938.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
Length = 499
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 79/154 (51%), Gaps = 8/154 (5%)
Query: 194 NNNADSKEGSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMR 253
N+ D G S ++Q+ S + S ++P K S + +N D+ +
Sbjct: 323 NHTGDGGAGQSQAQQLQSIFLPGQG-----SSRKPGIKTVEEMSRRCSLQDNNRDAKRHK 377
Query: 254 -SKQDENKSDSSKTKDNSKPVEPPKDY-IHVRARRGQATDSHSLAERVRREKISERMKFL 311
S + +S + NS EP + + RA++G A D S+A R RRE+IS+R+K L
Sbjct: 378 GSTAQRTRFGASSKRGNSHKREPALNTNLKPRAKQGCANDPQSIAARQRRERISDRLKIL 437
Query: 312 QDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 345
Q+L+P +KV ML++ INYV+ LQ QV+ L
Sbjct: 438 QELIPNGSKVD-LVTMLEKAINYVKFLQLQVKVL 470
>gi|356571031|ref|XP_003553685.1| PREDICTED: uncharacterized protein LOC100784724 [Glycine max]
Length = 518
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 61/94 (64%), Gaps = 9/94 (9%)
Query: 255 KQDENKSDSSKTKDNSKPVEPPKDYIHV-----RARRGQATDSHSLAERVRREKISERMK 309
++ E+ DS+ DN P+D + R +R + + H+L+E+ RREKI+++M+
Sbjct: 301 RKHEDTDDSTYLSDNDGE---PEDMVKQDREGNRVKRSRNPEVHNLSEKKRREKINKKMR 357
Query: 310 FLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
L+DL+P CNKV KA MLD+ I+Y+++L+ Q++
Sbjct: 358 TLKDLIPNCNKV-DKASMLDDAIDYLKTLKLQLQ 390
>gi|357510373|ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
gi|355500490|gb|AES81693.1| Transcription factor PIF1 [Medicago truncatula]
Length = 467
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
+R +A + H+L+ER RR++I+E+MK LQ+L+P NK + KA MLDE I+Y++SLQ QV+
Sbjct: 255 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNK-SDKASMLDEAIDYLKSLQLQVQR 313
Query: 345 LSM 347
+ +
Sbjct: 314 VQL 316
>gi|225458663|ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vitis vinifera]
gi|302142294|emb|CBI19497.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 289 ATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMK 348
A + H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+ L+M+
Sbjct: 188 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTMR 246
>gi|255573157|ref|XP_002527508.1| DNA binding protein, putative [Ricinus communis]
gi|223533148|gb|EEF34906.1| DNA binding protein, putative [Ricinus communis]
Length = 296
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
RA RG ATD S+ R RRE+I+ER++ LQ+LVP KV + ML+E ++YV+ LQ Q
Sbjct: 207 TRASRGAATDPQSIYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQ 265
Query: 342 VEFLS 346
++ LS
Sbjct: 266 IKLLS 270
>gi|357504213|ref|XP_003622395.1| BHLH transcription factor [Medicago truncatula]
gi|355497410|gb|AES78613.1| BHLH transcription factor [Medicago truncatula]
Length = 141
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Query: 300 RREKISERMKFLQDLVPGCNK-VTGKAVMLDEIINYVQSLQRQVE 343
RREKISER+K L+DLVP K V GK +ML EIINY+QSLQ QVE
Sbjct: 60 RREKISERIKMLEDLVPRYTKLVIGKTLMLYEIINYIQSLQHQVE 104
>gi|414868828|tpg|DAA47385.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 327
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
+RR ++H+L E+ RR KI+ER+K LQ +VPGC+K + +A LD+ I+Y++SLQ QV+
Sbjct: 172 SRRSHHGEAHNLTEKRRRHKINERLKTLQQIVPGCSK-SNQASTLDQTIHYMKSLQHQVQ 230
Query: 344 FLS 346
+S
Sbjct: 231 AMS 233
>gi|413924221|gb|AFW64153.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 230
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 298 RVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
++RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 140 QLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSM 188
>gi|225437758|ref|XP_002273729.1| PREDICTED: uncharacterized protein LOC100253874 [Vitis vinifera]
Length = 569
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R ++ + HSL+E+ RR++I+++M+ LQ+L+P C KV K +LDE I+Y+++LQ QV+
Sbjct: 379 SKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKVD-KISILDEAIDYLKTLQLQVQ 437
Query: 344 FLSM 347
+SM
Sbjct: 438 VMSM 441
>gi|357480671|ref|XP_003610621.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355511956|gb|AES93579.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 331
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
R+ RG ATD SL R RRE+I+ER+K LQ+LVP KV + ML+E + YV+ LQ Q+
Sbjct: 225 RSSRGPATDPQSLYARKRRERINERLKILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 283
Query: 343 EFLS 346
+ LS
Sbjct: 284 KLLS 287
>gi|54306640|gb|AAV33474.1| basic helix-loop-helix protein [Fragaria x ananassa]
Length = 298
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 289 ATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMK 348
A + H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+ LSM+
Sbjct: 145 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSMR 203
>gi|289540888|gb|ADD09565.1| unknown [Trifolium repens]
Length = 290
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
RA RG ATD SL R RREKI+ER++ LQ+LVP KV + ML++ I+YV+ LQ Q
Sbjct: 198 ARANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKV-DISTMLEDAIHYVKFLQLQ 256
Query: 342 VEFLS 346
++ LS
Sbjct: 257 IKLLS 261
>gi|302788881|ref|XP_002976209.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
gi|300155839|gb|EFJ22469.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
Length = 512
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 48/70 (68%), Gaps = 6/70 (8%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKV------TGKAVMLDEIINYV 335
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T + MLDE + Y+
Sbjct: 416 LRAKRGCATHPRSIAERVRRTRISERMRRLQELVPNMDKSLAVIQQTNTSDMLDEAVEYM 475
Query: 336 QSLQRQVEFL 345
+ LQ+QV+ L
Sbjct: 476 KFLQKQVDDL 485
>gi|297836114|ref|XP_002885939.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
gi|297331779|gb|EFH62198.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 206 SEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMR------------ 253
S++ T T TD N R K+ + K E ++ E E + R
Sbjct: 149 SKKRTRATSTDKNKRANKARRSQKGIEMSGDNENIGEEEYTEKAVGKRKTKPLKPQKTCC 208
Query: 254 SKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQD 313
S + N D+ +K++ + + RA RG ATD SL R RRE+I+ER++ LQ
Sbjct: 209 SDDESNGGDTFLSKEDGEDSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQH 268
Query: 314 LVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 346
LVP KV + ML+E + YV+ LQ Q++ LS
Sbjct: 269 LVPNGTKVH-ISTMLEEAVQYVKFLQLQIKLLS 300
>gi|297733906|emb|CBI15153.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 9/115 (7%)
Query: 234 PPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSH 293
P + P+ + D +S EN+ + +TK + RR +A H
Sbjct: 139 PSSESPRSLKAKTTDEDSACHGGSENQDEDRETKTQTGRSHS--------TRRSRAAAIH 190
Query: 294 SLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMK 348
+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I Y++ LQ QV+ +S++
Sbjct: 191 NQSERRRRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVQMMSVR 244
>gi|242033665|ref|XP_002464227.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
gi|241918081|gb|EER91225.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
Length = 300
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 78/147 (53%), Gaps = 17/147 (11%)
Query: 202 GSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKS 261
G+S + Q D + R RK ++ +K K++ ED S+ S EN S
Sbjct: 142 GTSDKRKHLEQGKLDGHTRSRKYAKKSDSKRAK-----KIMQR--EDGQSLSSCTFENDS 194
Query: 262 DSSKTKDNSKPVEPPKDYIHVRAR--RGQATDSHSLAERVRREKISERMKFLQDLVPGCN 319
++S+ + P D + +A+ R AT+S SL R RRE+I+ER++ LQ+LVP
Sbjct: 195 NASQGR-------PVSDNLGGKAKADRRSATESQSLYARKRRERINERLRILQNLVPNGT 247
Query: 320 KVTGKAVMLDEIINYVQSLQRQVEFLS 346
KV + ML+E + YV+ LQ Q++ LS
Sbjct: 248 KVD-ISTMLEEAVEYVKFLQLQIKLLS 273
>gi|357161826|ref|XP_003579215.1| PREDICTED: transcription factor bHLH139-like [Brachypodium
distachyon]
Length = 301
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 52/88 (59%), Gaps = 10/88 (11%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
RA RG +TD SL R RRE+I+ER+K LQ LVP KV + ML+E ++YV+ LQ Q
Sbjct: 215 ARAARGASTDPQSLYARKRRERINERLKTLQTLVPNGTKVD-MSTMLEEAVHYVKFLQLQ 273
Query: 342 VEFLS---------MKLATVNPRMDLNM 360
++ LS + +N +DLNM
Sbjct: 274 IKVLSSDDMWMYAPLAYNGMNIGLDLNM 301
>gi|289540905|gb|ADD09579.1| unknown [Trifolium repens]
Length = 276
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
RA RG ATD SL R RREKI+ER++ LQ+LVP KV + ML++ I+YV+ LQ Q
Sbjct: 184 ARANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKVD-ISTMLEDAIHYVKFLQLQ 242
Query: 342 VEFLS 346
++ LS
Sbjct: 243 IKLLS 247
>gi|302142209|emb|CBI19412.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RA RG ATD SL R RRE+I+ER++ LQ+LVP KV + ML+E ++YV+ LQ Q+
Sbjct: 94 RASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQI 152
Query: 343 EFLS 346
+ LS
Sbjct: 153 KLLS 156
>gi|225457285|ref|XP_002284441.1| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 423
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 9/115 (7%)
Query: 234 PPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSH 293
P + P+ + D +S EN+ + +TK + RR +A H
Sbjct: 177 PSSESPRSLKAKTTDEDSACHGGSENQDEDRETKTQTGRSHS--------TRRSRAAAIH 228
Query: 294 SLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMK 348
+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I Y++ LQ QV+ +S++
Sbjct: 229 NQSERRRRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVQMMSVR 282
>gi|224055255|ref|XP_002298446.1| predicted protein [Populus trichocarpa]
gi|222845704|gb|EEE83251.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RA+RG AT S+AERVRR +ISERM+ LQ+L P +K T A LD I ++ LQ+Q
Sbjct: 336 IRAKRGFATHPRSIAERVRRTRISERMRKLQELFPDMDKQTSTADKLDLSIELIKDLQKQ 395
Query: 342 VEFLS 346
V+ L+
Sbjct: 396 VKSLA 400
>gi|302759440|ref|XP_002963143.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
gi|300170004|gb|EFJ36606.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
Length = 302
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RA+RG ATD S+ R RRE+I+ER+K LQ LVP KV ML+E I+YV+ LQ QV
Sbjct: 212 RAKRGSATDPQSVYARHRRERINERLKTLQHLVPNGAKV-DIVTMLEEAIHYVKFLQLQV 270
Query: 343 EFLS 346
LS
Sbjct: 271 NMLS 274
>gi|168000336|ref|XP_001752872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696035|gb|EDQ82376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 583
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
R +RG ATD S+ R RREKI+ER++ LQ L+P KV MLDE ++YVQ L+RQV
Sbjct: 448 RVQRGSATDPQSVHARARREKIAERLRKLQHLIPNGGKVD-IVTMLDEAVHYVQFLKRQV 506
>gi|356501827|ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783804 [Glycine max]
Length = 852
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 57/93 (61%), Gaps = 13/93 (13%)
Query: 274 EPPKDYIHVR-ARRGQATDS------HSLAERVRREKISERMKFLQDLVPGCNKVTGKAV 326
E P+D + + AR G H+L ER RR+KI++RM+ L++L+P CNK T KA
Sbjct: 730 EEPEDVVKEKPAREGTGVKRSRNAQVHNLCERKRRDKINKRMRILKELIPNCNK-TDKAS 788
Query: 327 MLDEIINYVQSLQRQVE-----FLSMKLATVNP 354
MLD+ I Y+++L+ Q++ F S ++A V P
Sbjct: 789 MLDDAIEYLKTLKLQIQVNFKSFSSYQIAFVRP 821
>gi|168023762|ref|XP_001764406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684270|gb|EDQ70673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1015
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 65/108 (60%), Gaps = 9/108 (8%)
Query: 254 SKQDENKSDSSKTKDNS-----KPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERM 308
S+++E + S +D S KP+ + R+R A + H+ +ER RR++I+E+M
Sbjct: 698 SEREETECQSEDGEDESVDTKHKPITTGRGSTTKRSR---AAEVHNQSERRRRDRINEKM 754
Query: 309 KFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM 356
+ LQ+L+P NK T KA MLDE I+Y++ LQ Q++ +S++ P M
Sbjct: 755 RALQELIPNSNK-TDKASMLDEAIDYLKILQLQLQMMSIRTGMTLPPM 801
>gi|302805681|ref|XP_002984591.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
gi|300147573|gb|EFJ14236.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
Length = 64
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R +A + H+L+ER RR++I+ERMK LQ+L+P NK T KA MLDE I Y++ LQ Q++
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNK-TDKASMLDEAIEYLKLLQHQLQ 62
Query: 344 FL 345
+
Sbjct: 63 VV 64
>gi|297845732|ref|XP_002890747.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336589|gb|EFH67006.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RA +G ATD SL R RREKI+ER+K LQ+LVP KV + ML+E ++YV+ LQ Q+
Sbjct: 168 RATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKV-DISTMLEEAVHYVKFLQLQI 226
Query: 343 EFLS 346
+ LS
Sbjct: 227 KLLS 230
>gi|449438623|ref|XP_004137087.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
gi|449495759|ref|XP_004159936.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
Length = 279
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RA RG ATD SL R RRE+I+ER++ LQ LVP KV + ML+E + YV+ LQ Q+
Sbjct: 185 RASRGSATDPQSLYARKRRERINERLRILQTLVPNGTKV-DISTMLEEAVQYVKFLQLQI 243
Query: 343 EFLS 346
+ LS
Sbjct: 244 KLLS 247
>gi|18396475|ref|NP_564293.1| transcription factor bHLH54 [Arabidopsis thaliana]
gi|75301354|sp|Q8LEG1.1|BH054_ARATH RecName: Full=Transcription factor bHLH54; AltName: Full=Basic
helix-loop-helix protein 54; Short=AtbHLH54; Short=bHLH
54; AltName: Full=Transcription factor EN 114; AltName:
Full=bHLH transcription factor bHLH054
gi|21553570|gb|AAM62663.1| unknown [Arabidopsis thaliana]
gi|225897974|dbj|BAH30319.1| hypothetical protein [Arabidopsis thaliana]
gi|332192750|gb|AEE30871.1| transcription factor bHLH54 [Arabidopsis thaliana]
Length = 258
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RA +G ATD SL R RREKI+ER+K LQ+LVP KV + ML+E ++YV+ LQ Q+
Sbjct: 168 RATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKV-DISTMLEEAVHYVKFLQLQI 226
Query: 343 EFLS 346
+ LS
Sbjct: 227 KLLS 230
>gi|449445700|ref|XP_004140610.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 9/85 (10%)
Query: 259 NKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC 318
+K + + K+N+K V +R +A H+ +ER RR+KI++RMK LQ LVP
Sbjct: 272 HKDEGDRKKENAKS--------SVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNS 323
Query: 319 NKVTGKAVMLDEIINYVQSLQRQVE 343
NK T KA MLDE+I Y++ LQ QV+
Sbjct: 324 NK-TDKASMLDEVIEYLKQLQAQVQ 347
>gi|297814329|ref|XP_002875048.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
gi|297320885|gb|EFH51307.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
V +R +A H+ +ER RR+KI++RMK LQ LVP +K T KA MLDE+I Y++ LQ Q
Sbjct: 209 VSTKRSRAAAIHNQSERKRRDKINQRMKILQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 267
Query: 342 VEFLS 346
V +S
Sbjct: 268 VSMMS 272
>gi|449515887|ref|XP_004164979.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 9/85 (10%)
Query: 259 NKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC 318
+K + + K+N+K V +R +A H+ +ER RR+KI++RMK LQ LVP
Sbjct: 272 HKDEGDRKKENAKS--------SVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNS 323
Query: 319 NKVTGKAVMLDEIINYVQSLQRQVE 343
NK T KA MLDE+I Y++ LQ QV+
Sbjct: 324 NK-TDKASMLDEVIEYLKQLQAQVQ 347
>gi|242050734|ref|XP_002463111.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
gi|241926488|gb|EER99632.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
Length = 282
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 281 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 340
+ RA RG ATD SL R RRE+I+ER++ LQ LVP KV + ML+E YV+ LQ
Sbjct: 189 YTRASRGAATDPQSLYARKRRERINERLRILQKLVPNGTKV-DISTMLEEAAQYVKFLQL 247
Query: 341 QVEFLS 346
Q++ LS
Sbjct: 248 QIKLLS 253
>gi|255547289|ref|XP_002514702.1| DNA binding protein, putative [Ricinus communis]
gi|223546306|gb|EEF47808.1| DNA binding protein, putative [Ricinus communis]
Length = 440
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 87/170 (51%), Gaps = 17/170 (10%)
Query: 183 LRVSRSSTPESNNNADSKEGSSLSEQI-TSQTVTDSNPRKRKS---IQRPKAKETPPTSD 238
L + + + ESN A S GS+ E + S + S R+S + + E+PP S
Sbjct: 150 LLMKKRTRSESNQCARSFNGSTREEHMDLSACASASATFCRESDTTMMTWASFESPPPSL 209
Query: 239 PKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAER 298
+ S+ QDE++ ++T + +RR +A H+ +ER
Sbjct: 210 KAKTTDEDSASHGGSENQDEDRETKTETVRSHS------------SRRTRAAAVHNQSER 257
Query: 299 VRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMK 348
RR++I+++MK LQ LVP +K T KA MLDE+I Y++ LQ QV+ +S++
Sbjct: 258 RRRDRINQKMKALQKLVPNASK-TDKASMLDEVIEYLKQLQAQVQAMSVR 306
>gi|224060782|ref|XP_002300268.1| predicted protein [Populus trichocarpa]
gi|222847526|gb|EEE85073.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
RA +G ATD SL R RRE+I+ER++ LQ+LVP KV + ML+E + YV+ LQ Q
Sbjct: 224 TRASKGAATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVQYVKFLQLQ 282
Query: 342 VEFLS 346
++ LS
Sbjct: 283 IKLLS 287
>gi|334184893|ref|NP_001189738.1| transcription factor bHLH129 [Arabidopsis thaliana]
gi|330255120|gb|AEC10214.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 309
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 276 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
P+D + RA+RG AT S+AER RR +IS ++K LQ+LVP +K T A MLD +
Sbjct: 223 PEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVE 282
Query: 334 YVQSLQRQVEFL 345
+++ LQ QVE L
Sbjct: 283 HIKGLQHQVESL 294
>gi|20127012|gb|AAM10933.1|AF488561_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 399
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
V +R +A H+ +ER RR+KI++RMK LQ LVP +K T KA MLDE+I Y++ LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 265
Query: 342 VEFLS 346
V +S
Sbjct: 266 VSMMS 270
>gi|30678541|ref|NP_191916.3| transcription factor UNE10 [Arabidopsis thaliana]
gi|75299638|sp|Q8GZ38.1|UNE10_ARATH RecName: Full=Transcription factor UNE10; AltName: Full=Basic
helix-loop-helix protein 16; Short=AtbHLH16; Short=bHLH
16; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 10;
AltName: Full=Transcription factor EN 108; AltName:
Full=bHLH transcription factor bHLH016
gi|26449558|dbj|BAC41905.1| putative bHLH transcription factor bHLH016 [Arabidopsis thaliana]
gi|109134123|gb|ABG25060.1| At4g00050 [Arabidopsis thaliana]
gi|332656418|gb|AEE81818.1| transcription factor UNE10 [Arabidopsis thaliana]
Length = 399
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
V +R +A H+ +ER RR+KI++RMK LQ LVP +K T KA MLDE+I Y++ LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 265
Query: 342 VEFLS 346
V +S
Sbjct: 266 VSMMS 270
>gi|224065030|ref|XP_002301638.1| predicted protein [Populus trichocarpa]
gi|222843364|gb|EEE80911.1| predicted protein [Populus trichocarpa]
Length = 155
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 271 KPVEPPKDYI--HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVML 328
K + P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T A ML
Sbjct: 64 KLLHVPEDSVPCKIRAKRGFATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADML 123
Query: 329 DEIINYVQSLQRQVEFLSMKL 349
D + +++ LQ +VE L ++
Sbjct: 124 DFAVQHIKGLQNEVEKLHKEM 144
>gi|414868827|tpg|DAA47384.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 339
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
+RR ++H+L E+ RR KI+ER K LQ +VPGC+K + +A LD+ I+Y++SLQ QV+
Sbjct: 175 SRRSHHGEAHNLTEKRRRHKINERFKTLQQIVPGCSK-SNQASTLDQTIHYMKSLQHQVQ 233
Query: 344 FLS 346
+S
Sbjct: 234 AMS 236
>gi|297744077|emb|CBI37047.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R ++ + HSL+E+ RR++I+++M+ LQ+L+P C KV K +LDE I+Y+++LQ QV+
Sbjct: 10 SKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKVD-KISILDEAIDYLKTLQLQVQ 68
Query: 344 FLSM 347
+SM
Sbjct: 69 VMSM 72
>gi|302793783|ref|XP_002978656.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
gi|300153465|gb|EFJ20103.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
Length = 66
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R +A + H+L+ER RR++I+ERMK LQ+L+P NK T KA MLDE I Y++ LQ Q++
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNK-TDKASMLDEAIEYLKLLQHQLQ 62
Query: 344 FL 345
+
Sbjct: 63 VV 64
>gi|302812823|ref|XP_002988098.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
gi|300144204|gb|EFJ10890.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
Length = 422
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RAR+G A D S+A R RRE+IS+R+K LQ+LVP KV ML++ INYV+ LQ QV
Sbjct: 359 RARQGSANDPQSIAARHRRERISDRLKILQELVPNSTKV-DLVTMLEKAINYVKFLQLQV 417
Query: 343 E 343
+
Sbjct: 418 K 418
>gi|297798162|ref|XP_002866965.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
gi|297312801|gb|EFH43224.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 288 QATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
+A + H+L+E+ RR +I+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ L+M
Sbjct: 176 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTM 234
Query: 348 K 348
+
Sbjct: 235 R 235
>gi|145360933|ref|NP_181843.2| transcription factor bHLH129 [Arabidopsis thaliana]
gi|218563526|sp|Q9ZW81.2|BH129_ARATH RecName: Full=Transcription factor bHLH129; AltName: Full=Basic
helix-loop-helix protein 129; Short=AtbHLH129;
Short=bHLH 129; AltName: Full=Transcription factor EN
73; AltName: Full=bHLH transcription factor bHLH129
gi|330255119|gb|AEC10213.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 297
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 276 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
P+D + RA+RG AT S+AER RR +IS ++K LQ+LVP +K T A MLD +
Sbjct: 225 PEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVE 284
Query: 334 YVQSLQRQVE 343
+++ LQ QVE
Sbjct: 285 HIKGLQHQVE 294
>gi|297606863|ref|NP_001059108.2| Os07g0193800 [Oryza sativa Japonica Group]
gi|255677582|dbj|BAF21022.2| Os07g0193800, partial [Oryza sativa Japonica Group]
Length = 112
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 41/52 (78%), Gaps = 2/52 (3%)
Query: 250 NSMRSKQDENKSDSSKTKD-NSKPVEPPK-DYIHVRARRGQATDSHSLAERV 299
+S+R++ + +SSK D N+ P EPPK DYIHVRARRGQATDSHSLAERV
Sbjct: 46 DSLRTEAGTDSGNSSKAADKNATPPEPPKQDYIHVRARRGQATDSHSLAERV 97
>gi|3763923|gb|AAC64303.1| hypothetical protein [Arabidopsis thaliana]
Length = 295
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 276 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
P+D + RA+RG AT S+AER RR +IS ++K LQ+LVP +K T A MLD +
Sbjct: 223 PEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVE 282
Query: 334 YVQSLQRQVE 343
+++ LQ QVE
Sbjct: 283 HIKGLQHQVE 292
>gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabidopsis thaliana]
gi|75309699|sp|Q9FUA4.1|SPT_ARATH RecName: Full=Transcription factor SPATULA; AltName: Full=Basic
helix-loop-helix protein 24; Short=AtbHLH24; Short=bHLH
24; AltName: Full=Transcription factor EN 99; AltName:
Full=bHLH transcription factor bHLH024
gi|11245494|gb|AAG33640.1|AF319540_1 SPATULA [Arabidopsis thaliana]
gi|110738410|dbj|BAF01131.1| putative bHLH transcription factor (AtbHLH024) / SPATULA (SPT)
[Arabidopsis thaliana]
gi|111074392|gb|ABH04569.1| At4g36930 [Arabidopsis thaliana]
gi|332661320|gb|AEE86720.1| transcription factor SPATULA [Arabidopsis thaliana]
Length = 373
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 288 QATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
+A + H+L+E+ RR +I+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ L+M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTM 255
Query: 348 K 348
+
Sbjct: 256 R 256
>gi|356541789|ref|XP_003539355.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 381
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 293 HSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMK 348
H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+ LSM+
Sbjct: 145 HNLSEKRRRGRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSMR 199
>gi|356541324|ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 459
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
V +R +A H+ +ER RR+KI++RMK LQ LVP +K T KA MLDE+I Y++ LQ Q
Sbjct: 264 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 322
Query: 342 VEFL 345
V+ +
Sbjct: 323 VQMM 326
>gi|297828011|ref|XP_002881888.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
gi|297327727|gb|EFH58147.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
RA+RG AT S+AER RR +IS ++K LQ+LVP +K T A MLD + +++ LQ Q
Sbjct: 233 ARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQ 292
Query: 342 VE 343
VE
Sbjct: 293 VE 294
>gi|356495472|ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 375
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 293 HSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMK 348
H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+ LSM+
Sbjct: 149 HNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSMR 203
>gi|357445143|ref|XP_003592849.1| Transcription factor bHLH128 [Medicago truncatula]
gi|355481897|gb|AES63100.1| Transcription factor bHLH128 [Medicago truncatula]
Length = 343
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 276 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD +
Sbjct: 257 PQDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQ 316
Query: 334 YVQSLQRQVEFLSMKL 349
+++ LQ QV+ L L
Sbjct: 317 HIKGLQTQVQKLHEDL 332
>gi|302804013|ref|XP_002983759.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
gi|300148596|gb|EFJ15255.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
Length = 89
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 52/82 (63%), Gaps = 9/82 (10%)
Query: 268 DNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVM 327
D KP PK R +A + H+L+ER RR++I+E+M+ LQ+L+P NK T KA M
Sbjct: 5 DTKKPATRPK--------RSRAAEVHNLSERRRRDRINEKMRALQELIPNSNK-TDKASM 55
Query: 328 LDEIINYVQSLQRQVEFLSMKL 349
LDE I Y++ LQ Q++ ++L
Sbjct: 56 LDEAIEYLKMLQLQLQVPKIEL 77
>gi|42573075|ref|NP_974634.1| transcription factor bHLH23 [Arabidopsis thaliana]
gi|332660144|gb|AEE85544.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 340
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R +A H L+ER RR+KI+E MK LQ+L+P C K T ++ MLD++I YV+SLQ Q++
Sbjct: 273 SKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTK-TDRSSMLDDVIEYVKSLQSQIQ 331
Query: 344 FLSMKL 349
+++
Sbjct: 332 GKHLRI 337
>gi|302784756|ref|XP_002974150.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
gi|300158482|gb|EFJ25105.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
Length = 499
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
Query: 242 VAENPEDSNSMR-SKQDENKSDSSKTKDNSKPVEPPKDY-IHVRARRGQATDSHSLAERV 299
+ EN D+ + S + +S + NS EP + + RA++G A D S+A R
Sbjct: 366 LQENNRDAKRHKGSTAQRTRFGASSKRGNSHKREPALNTNLKPRAKQGCANDPQSIAARQ 425
Query: 300 RREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 345
RRE+IS+R+K LQ+L+P +KV ML++ INYV+ LQ QV+ L
Sbjct: 426 RRERISDRLKILQELIPNGSKVD-LVTMLEKAINYVKFLQLQVKVL 470
>gi|357437591|ref|XP_003589071.1| Transcription factor bHLH85 [Medicago truncatula]
gi|357437635|ref|XP_003589093.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478119|gb|AES59322.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478141|gb|AES59344.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 375
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
RA RG ATD SL R RRE+I+ER++ LQ+LVP KV + ML+E +NYV+ LQ Q
Sbjct: 274 TRASRGSATDPQSLYARKRRERINERLRVLQNLVPNGTKV-DISTMLEEAVNYVKFLQTQ 332
Query: 342 VEFLSM 347
++ ++
Sbjct: 333 IKVCTI 338
>gi|218187187|gb|EEC69614.1| hypothetical protein OsI_38988 [Oryza sativa Indica Group]
Length = 271
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 283 RARRG-QATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
RARR + + +HSL ER RR KI+E +K LQ LVPGC+K +A LD+ I Y++SLQ+
Sbjct: 112 RARRSSRYSQTHSLTERKRRCKINENLKTLQQLVPGCDKSNNQASTLDKTIRYMKSLQQH 171
Query: 342 VEFLSM 347
V+ +S+
Sbjct: 172 VQAMSV 177
>gi|4006880|emb|CAB16798.1| putative protein [Arabidopsis thaliana]
gi|7270642|emb|CAB80359.1| putative protein [Arabidopsis thaliana]
Length = 415
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 288 QATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
+A + H+L+E+ RR +I+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ L+M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTM 255
Query: 348 K 348
+
Sbjct: 256 R 256
>gi|357482855|ref|XP_003611714.1| Transcription factor SPATULA [Medicago truncatula]
gi|355513049|gb|AES94672.1| Transcription factor SPATULA [Medicago truncatula]
Length = 344
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 293 HSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMK 348
H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+ LS++
Sbjct: 116 HNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSLR 170
>gi|224137582|ref|XP_002327162.1| predicted protein [Populus trichocarpa]
gi|222835477|gb|EEE73912.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Query: 291 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMK 348
+ H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+ L+M+
Sbjct: 126 EVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTMR 182
>gi|302805717|ref|XP_002984609.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
gi|300147591|gb|EFJ14254.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
Length = 298
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 214 VTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSD--SSKTKDNSK 271
+TD+N R+ + +A + P P++++ + RS D+N ++ S + K +S
Sbjct: 161 LTDAN-RRMPPLGSSQALDQP--GAPRIISNSCSSPTRKRSADDQNTTNALSKREKIDSS 217
Query: 272 PVE-----PPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAV 326
P + R+R+G A D S+A R RRE+IS+R+K LQDLVP +KV
Sbjct: 218 PASSCCTTALNTNLKPRSRQGTANDPQSIAARQRRERISQRLKILQDLVPNGSKV-DLVT 276
Query: 327 MLDEIINYVQSLQRQVE 343
ML++ INYV+ +Q Q++
Sbjct: 277 MLEKAINYVKFMQLQLQ 293
>gi|302754898|ref|XP_002960873.1| hypothetical protein SELMODRAFT_402301 [Selaginella moellendorffii]
gi|300171812|gb|EFJ38412.1| hypothetical protein SELMODRAFT_402301 [Selaginella moellendorffii]
Length = 638
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RARRG AT S+AERVRR KISE +K L DLVP +K T A ML+ + Y++ L+ +
Sbjct: 557 LRARRGCATHPRSVAERVRRTKISEGIKRLHDLVPNMDKQTNTADMLNHAMEYMKQLKEK 616
Query: 342 VEFLSMKL 349
+E + +L
Sbjct: 617 IEQMKEEL 624
>gi|302793827|ref|XP_002978678.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
gi|300153487|gb|EFJ20125.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
Length = 298
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 214 VTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSD--SSKTKDNSK 271
+TD+N R+ + +A + P P++++ + RS D+N ++ S + K +S
Sbjct: 161 LTDAN-RRMPPLGSSQALDQPGA--PRIISNSSSSPTRKRSADDQNTTNAFSKREKIDSS 217
Query: 272 PVE-----PPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAV 326
P + R+R+G A D S+A R RRE+IS+R+K LQDLVP +KV
Sbjct: 218 PASSCCTTALNTNLKPRSRQGTANDPQSIAARQRRERISQRLKILQDLVPNGSKV-DLVT 276
Query: 327 MLDEIINYVQSLQRQVE 343
ML++ INYV+ +Q Q++
Sbjct: 277 MLEKAINYVKFMQLQLQ 293
>gi|357511681|ref|XP_003626129.1| Transcription factor PIF3 [Medicago truncatula]
gi|355501144|gb|AES82347.1| Transcription factor PIF3 [Medicago truncatula]
Length = 682
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
+++ ++T+ H+L+ER RR++I+ERM+ LQ+L+P CNK KA MLDE I Y++SLQ Q++
Sbjct: 425 SKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNKAD-KASMLDEAIEYLKSLQLQLQ 483
Query: 344 FLSM 347
+SM
Sbjct: 484 IMSM 487
>gi|312282787|dbj|BAJ34259.1| unnamed protein product [Thellungiella halophila]
Length = 353
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 273 VEPPKDYI--HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDE 330
++ P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD
Sbjct: 263 MQLPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDL 322
Query: 331 IINYVQSLQRQVEFL 345
+ +++ LQ Q++ L
Sbjct: 323 AVQHIKGLQHQLQNL 337
>gi|18390573|ref|NP_563749.1| transcription factor bHLH128 [Arabidopsis thaliana]
gi|75299737|sp|Q8H102.1|BH128_ARATH RecName: Full=Transcription factor bHLH128; AltName: Full=Basic
helix-loop-helix protein 128; Short=AtbHLH128;
Short=bHLH 128; AltName: Full=Transcription factor EN
74; AltName: Full=bHLH transcription factor bHLH128
gi|24030386|gb|AAN41354.1| unknown protein [Arabidopsis thaliana]
gi|332189775|gb|AEE27896.1| transcription factor bHLH128 [Arabidopsis thaliana]
Length = 362
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 273 VEPPKDYI--HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDE 330
++ P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD
Sbjct: 272 MQLPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDL 331
Query: 331 IINYVQSLQRQVEFL 345
+ +++ LQ Q++ L
Sbjct: 332 AVQHIKGLQHQLQNL 346
>gi|21554238|gb|AAM63313.1| Contains similarity to bHLH transcription factor GBOF-1 from Tulipa
gesneriana gb|AF185269 [Arabidopsis thaliana]
Length = 362
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 273 VEPPKDYI--HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDE 330
++ P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD
Sbjct: 272 MQLPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDL 331
Query: 331 IINYVQSLQRQVEFL 345
+ +++ LQ Q++ L
Sbjct: 332 AVQHIKGLQHQLQNL 346
>gi|302767438|ref|XP_002967139.1| hypothetical protein SELMODRAFT_86848 [Selaginella moellendorffii]
gi|300165130|gb|EFJ31738.1| hypothetical protein SELMODRAFT_86848 [Selaginella moellendorffii]
Length = 110
Score = 62.8 bits (151), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/62 (51%), Positives = 43/62 (69%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+RARRG AT S+AERVRR KISE +K L DLVP +K T A ML+ + Y++ L+ +
Sbjct: 44 LRARRGCATHPRSVAERVRRTKISEGIKRLHDLVPNMDKQTNTADMLNHAMEYMKQLKEK 103
Query: 342 VE 343
+E
Sbjct: 104 IE 105
>gi|297843372|ref|XP_002889567.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297335409|gb|EFH65826.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 357
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 273 VEPPKDYI--HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDE 330
++ P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD
Sbjct: 267 MQLPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDL 326
Query: 331 IINYVQSLQRQVEFL 345
+ +++ LQ Q++ L
Sbjct: 327 AVQHIKGLQHQLQNL 341
>gi|356536570|ref|XP_003536810.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 283
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 287 GQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 346
GQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ QV+ LS
Sbjct: 127 GQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLS 185
Query: 347 M 347
M
Sbjct: 186 M 186
>gi|87241328|gb|ABD33186.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 689
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 52/70 (74%), Gaps = 6/70 (8%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKV------TGKAVMLDEIINYVQS 337
+++ ++T+ H+L+ER RR++I+ERM+ LQ+L+P CNKV KA MLDE I Y++S
Sbjct: 425 SKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNKVDLFFLQADKASMLDEAIEYLKS 484
Query: 338 LQRQVEFLSM 347
LQ Q++ +SM
Sbjct: 485 LQLQLQIMSM 494
>gi|414887375|tpg|DAA63389.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 472
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RA RG ATD SL R RRE+I+ER++ LQ+LVP KV + ML+E YV+ LQ Q+
Sbjct: 197 RASRGGATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAAQYVKFLQLQI 255
Query: 343 EFLS 346
+ LS
Sbjct: 256 KLLS 259
>gi|356501423|ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [Glycine max]
Length = 562
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
+RR +A + H+ +ER RR++I+E+M+ LQ L+P NK T KA ML+E I Y++SLQ Q++
Sbjct: 356 SRRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNK-TDKASMLEEAIEYLKSLQFQLQ 414
Query: 344 FLSM 347
+ M
Sbjct: 415 VMWM 418
>gi|449521074|ref|XP_004167556.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 356
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 273 VEPPKDYI--HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDE 330
++ P+D + +RA+RG AT S+AER RR +IS ++K LQ+LVP +K T + MLD
Sbjct: 281 LQIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDL 340
Query: 331 IINYVQSLQRQVEFL 345
+ +++ LQ Q++ L
Sbjct: 341 AVQHIKGLQNQIQVL 355
>gi|218191124|gb|EEC73551.1| hypothetical protein OsI_07971 [Oryza sativa Indica Group]
Length = 217
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRA+RG AT S+AER RR +ISE+++ LQ+LVP +K T A MLD + +++ LQ Q
Sbjct: 141 VRAKRGCATHPRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQSQ 200
Query: 342 VEFL 345
++ L
Sbjct: 201 LQAL 204
>gi|357511583|ref|XP_003626080.1| Transcription factor SPATULA [Medicago truncatula]
gi|355501095|gb|AES82298.1| Transcription factor SPATULA [Medicago truncatula]
Length = 373
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 293 HSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATV 352
H+L+ER RR+KI+E+++ L++L+P CNK+ KA MLD+ I+Y+++L+ Q++ +SM A
Sbjct: 213 HNLSERKRRDKINEKIRALKELIPNCNKM-DKASMLDDAIDYLKTLKLQLQIMSMGRALC 271
Query: 353 NP 354
P
Sbjct: 272 MP 273
>gi|388517319|gb|AFK46721.1| unknown [Medicago truncatula]
Length = 373
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 293 HSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATV 352
H+L+ER RR+KI+E+++ L++L+P CNK+ KA MLD+ I+Y+++L+ Q++ +SM A
Sbjct: 213 HNLSERKRRDKINEKIRALKELIPNCNKM-DKASMLDDAIDYLKTLKLQLQIMSMGRALC 271
Query: 353 NP 354
P
Sbjct: 272 MP 273
>gi|297838323|ref|XP_002887043.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332884|gb|EFH63302.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 75/145 (51%), Gaps = 13/145 (8%)
Query: 211 SQTVTDSNPRKRKSIQRPKAKETPP------TSDPKVVAENPEDSNSMRSKQDENKSDSS 264
S T+ N + I P++ ETP SD VV SM K NK S
Sbjct: 116 SYGFTNWNHQHHMDIISPRSTETPQGQKDWLYSDSTVVTTGSRHE-SMSPKSAGNKR--S 172
Query: 265 KTKDNSKPVEPPKDYIHVRARRGQAT---DSHSLAERVRREKISERMKFLQDLVPGCNKV 321
+T ++++P + P + +A+ T D SLA + RRE+ISER+K LQ+LVP KV
Sbjct: 173 QTGESTQPSKKPNSGVTGKAKPKPTTSPKDPQSLAAKNRRERISERLKILQELVPNGTKV 232
Query: 322 TGKAVMLDEIINYVQSLQRQVEFLS 346
ML++ I+YV+ LQ QV+ L+
Sbjct: 233 D-LVTMLEKAISYVKFLQVQVKVLA 256
>gi|224129878|ref|XP_002320693.1| predicted protein [Populus trichocarpa]
gi|222861466|gb|EEE99008.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
RA RG ATD SL R RRE+I+ER+K LQ +VP KV + ML+E ++YV+ LQ Q
Sbjct: 270 TRASRGAATDPQSLYARKRRERINERLKILQHIVPNGTKVD-ISTMLEEAVHYVKFLQLQ 328
Query: 342 VE 343
++
Sbjct: 329 IK 330
>gi|242062246|ref|XP_002452412.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
gi|241932243|gb|EES05388.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
Length = 338
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRA+RG AT S+AER RR +ISE+++ LQDLVP +K T A MLD + +++ LQ +
Sbjct: 262 VRAKRGCATHPRSIAERERRTRISEKLRKLQDLVPNMDKQTSTADMLDLAVEHIKGLQSE 321
Query: 342 VEFL 345
++ L
Sbjct: 322 LQAL 325
>gi|168038260|ref|XP_001771619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677058|gb|EDQ63533.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 569
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RA+RG ATD S+ R RREKI+ER+K LQ LVP +V ML+E I++V+ L+ Q+
Sbjct: 471 RAKRGSATDPQSVYARHRREKINERLKTLQRLVPNGEQV-DIVTMLEEAIHFVKFLEFQL 529
Query: 343 EFL 345
E L
Sbjct: 530 ELL 532
>gi|413932893|gb|AFW67444.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 387
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 276 PKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYV 335
P D +HV R+G D RR++I E+M+ LQ+L+P CNK T KA +LDE I Y+
Sbjct: 177 PSDSVHVHKRKGMCRDESDSRSERRRDRIKEKMRALQELIPHCNK-TDKASILDETIEYL 235
Query: 336 QSLQRQVEFLSMKLATV 352
+SLQ QV+ + M V
Sbjct: 236 KSLQMQVQIMWMTSGMV 252
>gi|224081688|ref|XP_002306475.1| predicted protein [Populus trichocarpa]
gi|222855924|gb|EEE93471.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 64/101 (63%), Gaps = 7/101 (6%)
Query: 258 ENKSDSSKTKDNSKPVEPPKDYIHVR------ARRGQATDSHSLAERVRREKISERMKFL 311
EN++D ++ + +E D + V+ ++R +A + H+L+E+ RR +I+E+MK L
Sbjct: 102 ENETDHECDCESEEGLEALIDEMSVKPAPPRSSKRTRAAEVHNLSEKRRRSRINEKMKAL 161
Query: 312 QDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATV 352
Q+L+P +K T KA MLDE I Y++ LQ QV+ LS++ +
Sbjct: 162 QNLIPNSSK-TDKASMLDEAIEYLKLLQLQVQGLSVRFLEI 201
>gi|77556977|gb|ABA99773.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 266
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
R A +H+L E+ RR KI+ER + LQ LVPGC+ + +A LD+ I Y++SLQ Q+E
Sbjct: 79 RHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLEA 138
Query: 345 LS 346
S
Sbjct: 139 TS 140
>gi|224094310|ref|XP_002310136.1| predicted protein [Populus trichocarpa]
gi|222853039|gb|EEE90586.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 273 VEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEII 332
V+PPK R + D S+A R RRE+ISERM+ LQ LVPG K+ A MLDE I
Sbjct: 153 VKPPK-----RRNVKISKDPQSVAARHRRERISERMRILQRLVPGGTKM-DTASMLDEAI 206
Query: 333 NYVQSLQRQVEFL 345
+YV+ L++QV+ L
Sbjct: 207 HYVKFLKKQVQSL 219
>gi|297820750|ref|XP_002878258.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
gi|297324096|gb|EFH54517.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
Length = 439
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K T KA +LDE I+Y++SLQ Q++
Sbjct: 251 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQMQLQV 309
Query: 345 LSM 347
+ M
Sbjct: 310 MWM 312
>gi|297794285|ref|XP_002865027.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
gi|297310862|gb|EFH41286.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 53/92 (57%), Gaps = 20/92 (21%)
Query: 293 HSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS------ 346
H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ L+
Sbjct: 94 HNLSEKRRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 152
Query: 347 ---MKLATVNP----------RMDLNMEALLS 365
M+L V P D+N+E LL+
Sbjct: 153 LNPMRLPPVLPPTHTRINETLEQDMNLETLLA 184
>gi|356553623|ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 562
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
++R +A + H+ +ER RR++I+E+M+ LQ L+P NK T KA ML+E I Y++SLQ Q++
Sbjct: 356 SKRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNK-TDKASMLEEAIEYLKSLQFQLQ 414
Query: 344 FLSM 347
+ M
Sbjct: 415 VMWM 418
>gi|218187189|gb|EEC69616.1| hypothetical protein OsI_38990 [Oryza sativa Indica Group]
Length = 379
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
R A +H+L E+ RR KI+ER + LQ LVPGC+ + +A LD+ I Y++SLQ Q+E
Sbjct: 192 RHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLE 250
>gi|242086066|ref|XP_002443458.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
gi|241944151|gb|EES17296.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
Length = 316
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 63/133 (47%), Gaps = 9/133 (6%)
Query: 220 RKRKSI------QRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPV 273
R RKS +R K + D + N ++ S D N S S D
Sbjct: 160 RGRKSARNVGEAKRAKRAKKSGDEDSSMAIRNGSPTSCCTSDSDSNASLESADGDGDADA 219
Query: 274 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 333
PK RA R T+ S+ R RRE+I+ER+K LQ+LVP KV + ML+E ++
Sbjct: 220 RRPKG--KGRAGRSATTEPQSIYARKRRERINERLKILQNLVPNGTKVD-ISTMLEEAVH 276
Query: 334 YVQSLQRQVEFLS 346
YV+ LQ Q+ LS
Sbjct: 277 YVKFLQLQIRLLS 289
>gi|449468734|ref|XP_004152076.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 370
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 273 VEPPKDYI--HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDE 330
++ P+D + +RA+RG AT S+AER RR +IS ++K LQ+LVP +K T + MLD
Sbjct: 281 LQIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDL 340
Query: 331 IINYVQSLQRQVEFL 345
+ +++ LQ Q++ L
Sbjct: 341 AVQHIKGLQNQIQKL 355
>gi|357142794|ref|XP_003572696.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 317
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRA+RG AT S+AER RR +ISE+++ LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 241 VRAKRGCATHPRSIAERERRTRISEKLRKLQDLVPNMDKQTSTSDMLDLAVEHIKGLQSQ 300
Query: 342 VEFL 345
++ +
Sbjct: 301 LQAM 304
>gi|414590707|tpg|DAA41278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 286
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
RA RG AT+ SL R RRE+I+ER++ LQ+LVP KV + ML+E YV+ LQ Q
Sbjct: 194 ARASRGAATEPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAAQYVKFLQLQ 252
Query: 342 VEFLS 346
++ LS
Sbjct: 253 IKLLS 257
>gi|115459116|ref|NP_001053158.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|113564729|dbj|BAF15072.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|215695534|dbj|BAG90725.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195100|gb|EEC77527.1| hypothetical protein OsI_16412 [Oryza sativa Indica Group]
Length = 369
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%)
Query: 280 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 339
VRA+RG AT S+AER RR +ISE+++ LQ LVP +K T + MLD +++++ LQ
Sbjct: 283 FRVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQ 342
Query: 340 RQVEFL 345
Q++ L
Sbjct: 343 SQLQTL 348
>gi|302795837|ref|XP_002979681.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
gi|300152441|gb|EFJ19083.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
Length = 335
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
RA+RG ATD S+ R RRE+I+ER++ LQ LVP KV ML+E INYV+ LQ Q+
Sbjct: 238 RAKRGSATDPQSIYARQRRERINERLRALQGLVPNGAKV-DIVTMLEEAINYVKFLQLQL 296
>gi|312283297|dbj|BAJ34514.1| unnamed protein product [Thellungiella halophila]
Length = 448
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K T KA +LDE I+Y++SLQ Q++
Sbjct: 256 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQMQLQ 314
Query: 344 FLSM 347
+ M
Sbjct: 315 VMWM 318
>gi|47497385|dbj|BAD19423.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 110
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 54/83 (65%), Gaps = 8/83 (9%)
Query: 263 SSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVT 322
SS+++ ++P P R +R +A + H+L+E+ RR +I+E+MK LQ L+P +K T
Sbjct: 14 SSESEQPTRPARP-------RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-T 65
Query: 323 GKAVMLDEIINYVQSLQRQVEFL 345
KA MLD+ I Y++ LQ QV+ +
Sbjct: 66 DKASMLDDAIEYLKQLQLQVQMI 88
>gi|255548227|ref|XP_002515170.1| hypothetical protein RCOM_1343120 [Ricinus communis]
gi|223545650|gb|EEF47154.1| hypothetical protein RCOM_1343120 [Ricinus communis]
Length = 584
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 293 HSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATV 352
HSL+ER RR+KI+++M+ LQ L+P +KV KA MLD+ I Y+++LQ Q++ +SM+ +
Sbjct: 385 HSLSERKRRDKINKKMRALQALIPNSDKV-DKASMLDKAIEYLKTLQLQLQMMSMRGSCY 443
Query: 353 NPRM 356
P M
Sbjct: 444 MPPM 447
>gi|22327541|ref|NP_680385.1| transcription factor bHLH139 [Arabidopsis thaliana]
gi|122213858|sp|Q3E7L7.1|BH139_ARATH RecName: Full=Transcription factor bHLH139; AltName: Full=Basic
helix-loop-helix protein 139; Short=AtbHLH139;
Short=bHLH 139; AltName: Full=Transcription factor EN
116; AltName: Full=bHLH transcription factor bHLH139
gi|332007536|gb|AED94919.1| transcription factor bHLH139 [Arabidopsis thaliana]
Length = 223
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 27/144 (18%)
Query: 215 TDSNPRKRKSIQRPKAK-----ETPPTSDPKVVAENPEDSNSMRSKQDE-------NKSD 262
T+ N R+ + +P+ K E+ ++PK + + +S S DE N S
Sbjct: 67 TNRNVDSRQDLLKPRKKQKLSSESNLVTEPKTAWRDGQSLSSYNSSDDEKALGLVSNTSK 126
Query: 263 SSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVT 322
S K K +A RG A+D SL R RRE+I++R+K LQ LVP KV
Sbjct: 127 SLKRK--------------AKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKV- 171
Query: 323 GKAVMLDEIINYVQSLQRQVEFLS 346
+ ML++ ++YV+ LQ Q++ LS
Sbjct: 172 DISTMLEDAVHYVKFLQLQIKLLS 195
>gi|38345229|emb|CAE01659.2| OSJNBa0084K20.3 [Oryza sativa Japonica Group]
gi|38347437|emb|CAE02480.2| OSJNBa0076N16.1 [Oryza sativa Japonica Group]
gi|222629103|gb|EEE61235.1| hypothetical protein OsJ_15277 [Oryza sativa Japonica Group]
Length = 218
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRA+RG AT S+AER RR +ISE+++ LQ LVP +K T + MLD +++++ LQ Q
Sbjct: 134 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQ 193
Query: 342 VEFL 345
++ L
Sbjct: 194 LQTL 197
>gi|297824267|ref|XP_002880016.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
gi|297325855|gb|EFH56275.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
Length = 422
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K T KA +LDE I+Y++SLQ Q++
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQV 311
Query: 345 LSM 347
+ M
Sbjct: 312 MWM 314
>gi|6693022|gb|AAF24948.1|AC012375_11 T22C5.19 [Arabidopsis thaliana]
Length = 279
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 17/125 (13%)
Query: 222 RKSIQRPKAKETPPTSDPKVVAE---NPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKD 278
R+ + + K K+ +S+ V E N D S+ + D+ K+ + K +
Sbjct: 117 RQELAKSKKKQRV-SSESNTVDESNTNWVDGQSLSNSSDDEKASVTSVKGKT-------- 167
Query: 279 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 338
RA +G ATD SL R RREKI+ER+K LQ+LVP KV + ML+E ++YV+ L
Sbjct: 168 ----RATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKV-DISTMLEEAVHYVKFL 222
Query: 339 QRQVE 343
Q Q++
Sbjct: 223 QLQIK 227
>gi|222623194|gb|EEE57326.1| hypothetical protein OsJ_07428 [Oryza sativa Japonica Group]
Length = 103
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRA+RG AT S+AER RR +ISE+++ LQ+LVP +K T A MLD + +++ LQ Q
Sbjct: 27 VRAKRGCATHPRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQSQ 86
Query: 342 VEFL 345
++ L
Sbjct: 87 LQAL 90
>gi|440577342|emb|CCI55348.1| PH01B019A14.17 [Phyllostachys edulis]
Length = 184
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 290 TDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKL 349
+ H+ +ER RR++I+E++K LQ+L+P C K T K MLDE I+Y++SLQ Q++ L M
Sbjct: 19 VEFHNFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQIQLQMLVMGK 77
Query: 350 AT---VNPRMDLNMEALLS 365
T V P + M + S
Sbjct: 78 GTAPVVPPELQQYMHYITS 96
>gi|449461837|ref|XP_004148648.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524665|ref|XP_004169342.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 223
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 291 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 345
D S+A R+RRE+ISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 118 DPQSIAARLRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
>gi|356495899|ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 458
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 240 KVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERV 299
K + DS S E++ + K + N K V +R +A H+ +ER
Sbjct: 230 KTTTVDDHDSVSHSKPVGEDQDEGKKKRANGKS--------SVSTKRSRAAAIHNQSERK 281
Query: 300 RREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 345
RR+KI++RMK LQ LVP +K + KA MLDE+I Y++ LQ Q++ +
Sbjct: 282 RRDKINQRMKTLQKLVPNSSK-SDKASMLDEVIEYLKQLQAQLQMI 326
>gi|115460586|ref|NP_001053893.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|38344324|emb|CAE02150.2| OSJNBa0058K23.6 [Oryza sativa Japonica Group]
gi|113565464|dbj|BAF15807.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|218195592|gb|EEC78019.1| hypothetical protein OsI_17435 [Oryza sativa Indica Group]
gi|222629570|gb|EEE61702.1| hypothetical protein OsJ_16185 [Oryza sativa Japonica Group]
Length = 181
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 290 TDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
+ H+ +ER RR++I+E++K LQ+L+P C K T K MLDE I+Y++SLQ Q++ L M
Sbjct: 15 AEFHNFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQMLVM 71
>gi|342298442|emb|CBY05411.1| ALCATRAZ-like protein [Aethionema carneum]
Length = 224
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 282 VRAR-RGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 340
VR R R H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ
Sbjct: 97 VRTRQRSIDAKFHNLSEKRRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQL 155
Query: 341 QVEFLSM 347
QV+ L++
Sbjct: 156 QVQALAV 162
>gi|356506557|ref|XP_003522046.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 397
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 10/86 (11%)
Query: 275 PPKDYIHVRARRGQATDS--------HSLAERVRREKISERMKFLQDLVPGCNKVTGKAV 326
P +DY + R ++ H +ER RR+KI++RMK LQ LVP +K T KA
Sbjct: 213 PDEDYKATKVDRSSGSNKRIKANSVVHKQSERRRRDKINQRMKELQKLVPNSSK-TDKAS 271
Query: 327 MLDEIINYVQSLQRQVEFLS-MKLAT 351
MLDE+I Y++ LQ QV+ ++ MK+ T
Sbjct: 272 MLDEVIQYMKQLQAQVQMMNWMKMYT 297
>gi|226492870|ref|NP_001146411.1| uncharacterized protein LOC100279991 [Zea mays]
gi|219887061|gb|ACL53905.1| unknown [Zea mays]
Length = 254
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 300 RREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDL 358
RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+ +SM P M L
Sbjct: 12 RRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQMMSMGSGLCIPPMLL 69
>gi|20127070|gb|AAM10954.1|AF488598_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 442
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
RR +A + H+L+ER RR++I+ERMK LQ+L+P C++ T KA +LDE I+Y++SLQ Q++
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSR-TDKASILDEAIDYLKSLQMQLQV 311
Query: 345 LSM 347
+ M
Sbjct: 312 MWM 314
>gi|242076304|ref|XP_002448088.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
gi|241939271|gb|EES12416.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
Length = 226
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%)
Query: 280 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 339
VRA+RG AT S+AER RR +ISE+++ LQ LVP +K T A MLD +++++ LQ
Sbjct: 144 FRVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTADMLDLAVDHIRGLQ 203
Query: 340 RQVEFL 345
+++ L
Sbjct: 204 SELQAL 209
>gi|30694919|ref|NP_851021.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|7529749|emb|CAB86934.1| putative protein [Arabidopsis thaliana]
gi|332646347|gb|AEE79868.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 442
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
RR +A + H+L+ER RR++I+ERMK LQ+L+P C++ T KA +LDE I+Y++SLQ Q++
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSR-TDKASILDEAIDYLKSLQMQLQV 311
Query: 345 LSM 347
+ M
Sbjct: 312 MWM 314
>gi|356574311|ref|XP_003555292.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 64/127 (50%), Gaps = 2/127 (1%)
Query: 220 RKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDY 279
R KS + K+ T D + ++ + +NS S+ D N + P P D
Sbjct: 203 RNAKSRKNSKSASTSNDEDDRSLSLQVQRNNSCFSQSDSNAYLEPNGGASKDPAPPNLDR 262
Query: 280 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 339
RA A D SL R RRE+I+ER++ LQ+LVP KV + ML+E + YV+ LQ
Sbjct: 263 -KSRATTSAAADPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVQYVKFLQ 320
Query: 340 RQVEFLS 346
Q++ LS
Sbjct: 321 LQIKLLS 327
>gi|30694924|ref|NP_191465.3| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315658|ref|NP_001030889.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315685|ref|NP_001030890.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|75297820|sp|Q84LH8.1|PIF5_ARATH RecName: Full=Transcription factor PIF5; AltName: Full=Basic
helix-loop-helix protein 65; Short=AtbHLH65; Short=bHLH
65; AltName: Full=Phytochrome interacting factor-like 6;
AltName: Full=Phytochrome-interacting factor 5; AltName:
Full=Transcription factor EN 103; AltName: Full=bHLH
transcription factor bHLH065
gi|28372349|dbj|BAC56978.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|222424174|dbj|BAH20046.1| AT3G59060 [Arabidopsis thaliana]
gi|225898729|dbj|BAH30495.1| hypothetical protein [Arabidopsis thaliana]
gi|332646348|gb|AEE79869.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646349|gb|AEE79870.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646350|gb|AEE79871.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 444
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
RR +A + H+L+ER RR++I+ERMK LQ+L+P C++ T KA +LDE I+Y++SLQ Q++
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSR-TDKASILDEAIDYLKSLQMQLQV 311
Query: 345 LSM 347
+ M
Sbjct: 312 MWM 314
>gi|449463597|ref|XP_004149520.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
gi|449505798|ref|XP_004162571.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
Length = 550
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
+RR +A + H+L+ER RRE+I+E+MK LQ+L+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 347 SRRTRAAEVHNLSERRRRERINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 405
Query: 344 FLSM 347
+ M
Sbjct: 406 VMWM 409
>gi|255644916|gb|ACU22958.1| unknown [Glycine max]
Length = 242
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 273 VEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEII 332
++PPK R + D S+A R RRE+ISER+K LQ LVPG K+ A MLDE I
Sbjct: 126 IKPPK-----RRNVKISKDPQSVAARHRRERISERIKILQRLVPGGTKM-DTASMLDEAI 179
Query: 333 NYVQSLQRQVEFL 345
+YV+ L++QV+ L
Sbjct: 180 HYVKFLKKQVQTL 192
>gi|140084359|gb|ABO84933.1| Rhd6-like 4 [Physcomitrella patens]
Length = 67
Score = 60.8 bits (146), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 287 GQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 345
G ATD S+ R RREKI+ER++ LQ L+P KV MLDE ++YVQ L+RQV L
Sbjct: 1 GSATDPQSVHARARREKIAERLRKLQHLIPNGGKVD-IVTMLDEAVHYVQFLKRQVTLL 58
>gi|342298426|emb|CBY05403.1| ALCATRAZ-like protein [Lepidium appelianum]
Length = 173
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 293 HSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 347
H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ L++
Sbjct: 97 HNLSEKRRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYMKQLQLQVQTLAV 150
>gi|342298438|emb|CBY05409.1| ALCATRAZ-like protein [Lepidium campestre]
Length = 197
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 10/84 (11%)
Query: 293 HSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS------ 346
H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ L+
Sbjct: 97 HNLSEKRRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 155
Query: 347 ---MKLATVNPRMDLNMEALLSKD 367
M+L V P+ + L +D
Sbjct: 156 LNPMQLPPVLPQTQTRINETLEQD 179
>gi|413918730|gb|AFW58662.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 223
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
VRA+RG AT S+AER RR +ISE+++ LQ LVP +K T A MLD +++++ LQ +
Sbjct: 143 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTADMLDLAVDHIRGLQNE 202
Query: 342 VEFL 345
++ L
Sbjct: 203 LQAL 206
>gi|357143431|ref|XP_003572919.1| PREDICTED: transcription factor SPATULA-like [Brachypodium
distachyon]
Length = 312
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 291 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA 350
+ H+L+E+ RR +I+E+MK LQ LVP +K T KA MLD+ I Y++ LQ QV+ LSM+
Sbjct: 68 EVHNLSEKRRRCRINEKMKALQSLVPNSSK-TDKASMLDDAIEYLKQLQLQVQMLSMRNG 126
Query: 351 TVNPRMDLNMEA 362
P+++L + A
Sbjct: 127 LYLPQVNLPVGA 138
>gi|297788272|ref|XP_002862272.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297795123|ref|XP_002865446.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297307602|gb|EFH38530.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311281|gb|EFH41705.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 224
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%), Gaps = 20/147 (13%)
Query: 219 PRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKD 278
PRK++ I + E+ ++PK + + ++ S DEN + SK ++
Sbjct: 81 PRKKQKI----SSESNLVTEPKTAWRDGQSLSNYNSSDDENAL--GLVSNTSKSLKRK-- 132
Query: 279 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 338
++ +G A+D SL R RRE+I++R+K LQ LVP KV + ML++ ++YV+ L
Sbjct: 133 ---AKSNKGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKV-DISTMLEDAVHYVKFL 188
Query: 339 QRQVEFLSMKLATVNPRMDLNMEALLS 365
Q Q++ LS DL M ALL+
Sbjct: 189 QLQIKLLSSD--------DLWMYALLA 207
>gi|30689218|ref|NP_565991.2| transcription factor PIF4 [Arabidopsis thaliana]
gi|28201855|sp|Q8W2F3.1|PIF4_ARATH RecName: Full=Transcription factor PIF4; AltName: Full=Basic
helix-loop-helix protein 9; Short=AtbHLH9; Short=bHLH 9;
AltName: Full=Phytochrome-interacting factor 4; AltName:
Full=Short under red-light 2; AltName:
Full=Transcription factor EN 102; AltName: Full=bHLH
transcription factor bHLH009
gi|18026966|gb|AAL55716.1|AF251694_1 putative transcription factor BHLH9 [Arabidopsis thaliana]
gi|21068661|emb|CAD29449.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|222423257|dbj|BAH19605.1| AT2G43010 [Arabidopsis thaliana]
gi|225898591|dbj|BAH30426.1| hypothetical protein [Arabidopsis thaliana]
gi|291506714|gb|ADE08789.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506716|gb|ADE08790.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506718|gb|ADE08791.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506720|gb|ADE08792.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506722|gb|ADE08793.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506724|gb|ADE08794.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506726|gb|ADE08795.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506728|gb|ADE08796.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|330255103|gb|AEC10197.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 430
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K T KA +LDE I+Y++SLQ Q++
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQV 312
Query: 345 L 345
+
Sbjct: 313 M 313
>gi|356507477|ref|XP_003522492.1| PREDICTED: uncharacterized protein LOC100779374 [Glycine max]
Length = 243
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 291 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 345
D S+A R RRE+ISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ FL
Sbjct: 127 DPQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRFL 180
>gi|291506702|gb|ADE08783.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506704|gb|ADE08784.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506706|gb|ADE08785.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506708|gb|ADE08786.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506710|gb|ADE08787.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506712|gb|ADE08788.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
Length = 430
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K T KA +LDE I+Y++SLQ Q++
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQV 312
Query: 345 L 345
+
Sbjct: 313 M 313
>gi|30689224|ref|NP_850381.1| transcription factor PIF4 [Arabidopsis thaliana]
gi|330255104|gb|AEC10198.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 428
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K T KA +LDE I+Y++SLQ Q++
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQV 312
Query: 345 L 345
+
Sbjct: 313 M 313
>gi|357444407|ref|XP_003592481.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481529|gb|AES62732.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 287
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 271 KPVEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDE 330
K E PK RA ATD+ S+ R RRE+I+ER++ LQ LVP KV + ML+E
Sbjct: 185 KEHEAPKLGRKSRAASSPATDAQSIYARKRRERINERLRILQTLVPNGTKV-DISTMLEE 243
Query: 331 IINYVQSLQRQVEFLS 346
+ YV+ LQ Q++ LS
Sbjct: 244 AVQYVKFLQLQIKLLS 259
>gi|222424750|dbj|BAH20328.1| AT2G43010 [Arabidopsis thaliana]
Length = 409
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K T KA +LDE I+Y++SLQ Q++
Sbjct: 233 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQV 291
Query: 345 L 345
+
Sbjct: 292 M 292
>gi|242084060|ref|XP_002442455.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
gi|241943148|gb|EES16293.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
Length = 155
Score = 60.1 bits (144), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 44/60 (73%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
ARR ++H+L E+ RR KI +++K L+ LVPGC+ + +A +LD+ I +++SLQ+Q++
Sbjct: 19 ARRSHPAETHNLTEKRRRRKIDDKLKTLRQLVPGCDDKSNQASILDQTIQHIKSLQQQIQ 78
>gi|140084376|gb|ABO84935.1| Rhd6-like 6 [Physcomitrella patens]
Length = 67
Score = 59.7 bits (143), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/59 (57%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 287 GQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 345
G ATD S+ R RREKI+ER+K LQ+LVP KV MLDE I+YV+ LQ QVE L
Sbjct: 1 GSATDPQSVYARHRREKINERLKNLQNLVPNGAKVD-IVTMLDEAIHYVKFLQTQVELL 58
>gi|168027682|ref|XP_001766358.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682267|gb|EDQ68686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
A+R +A + H+ +ER RR++I+E+M+ LQ+L+P NK T KA MLDE I Y++ LQ Q++
Sbjct: 19 AKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIEYLKMLQLQLQ 77
Query: 344 FLSM 347
++
Sbjct: 78 VCAV 81
>gi|140084368|gb|ABO84934.1| Rhd6-like 5 [Physcomitrella patens]
Length = 67
Score = 59.7 bits (143), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/59 (57%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 287 GQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 345
G ATD S+ R RREKI+ER+K LQ+LVP KV MLDE I+YV+ LQ QVE L
Sbjct: 1 GSATDPQSVYARHRREKINERLKSLQNLVPNGAKVD-IVTMLDEAIHYVKFLQNQVELL 58
>gi|140084346|gb|ABO84932.1| Rhd6-like 3 [Physcomitrella patens]
Length = 67
Score = 59.7 bits (143), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/59 (57%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 287 GQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 345
G ATD S+ R RREKI+ER+K LQ LVP KV MLDE I+YVQ LQ QV L
Sbjct: 1 GSATDPQSVYARHRREKINERLKTLQHLVPNGAKVD-IVTMLDEAIHYVQFLQLQVTLL 58
>gi|225446765|ref|XP_002278399.1| PREDICTED: transcription factor PIF5-like [Vitis vinifera]
Length = 531
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
RR +A + H+L+ER RR++I+E+MK LQ+L+P NK + KA MLDE I Y++SLQ Q++
Sbjct: 335 RRSRAAEVHNLSERRRRDRINEKMKALQELIPHSNK-SDKASMLDEAIEYLKSLQLQLQL 393
Query: 345 LSMKLATVNPRMDLNMEALLSKDLFQSC 372
+ M V P M ++ +++ C
Sbjct: 394 MWMG-GGVAPMMFPGVQHYMARMGMGMC 420
>gi|242084070|ref|XP_002442460.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
gi|241943153|gb|EES16298.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
Length = 373
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Query: 300 RREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAT 351
RR KI+ER+K LQ LVPGC+K + +A LD+ I+Y++SLQ QV+ +S+ LA+
Sbjct: 225 RRHKINERLKTLQQLVPGCSK-SNQASTLDQTIHYMKSLQHQVQAMSVGLAS 275
>gi|255561634|ref|XP_002521827.1| DNA binding protein, putative [Ricinus communis]
gi|223539040|gb|EEF40637.1| DNA binding protein, putative [Ricinus communis]
Length = 284
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEII 332
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A MLDE +
Sbjct: 192 VRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAV 242
>gi|302143504|emb|CBI22065.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
RR +A + H+L+ER RR++I+E+MK LQ+L+P NK + KA MLDE I Y++SLQ Q++
Sbjct: 335 RRSRAAEVHNLSERRRRDRINEKMKALQELIPHSNK-SDKASMLDEAIEYLKSLQLQLQL 393
Query: 345 LSMKLATVNPRMDLNMEALLSKDLFQSC 372
+ M V P M ++ +++ C
Sbjct: 394 MWMG-GGVAPMMFPGVQHYMARMGMGMC 420
>gi|115454133|ref|NP_001050667.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|50428697|gb|AAT77048.1| putative transcription factor [Oryza sativa Japonica Group]
gi|108709850|gb|ABF97645.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|113549138|dbj|BAF12581.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|125587132|gb|EAZ27796.1| hypothetical protein OsJ_11741 [Oryza sativa Japonica Group]
Length = 310
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 18/152 (11%)
Query: 202 GSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTS-----DPKVVAENPEDSNSMRSKQ 256
G+S +I Q D + RKS ++ +K + D + N + + S+
Sbjct: 144 GASNKRKIQEQGRLDDQTKSRKSAKKAGSKRGKKAAQCEGEDGSIAVTNRQSLSCCTSEN 203
Query: 257 DENKSDSSKTKDNSKPVEPPKDYIHVRARRGQ--ATDSHSLAERVRREKISERMKFLQDL 314
D S S PV + +A+ G ATD SL R RRE+I+ER+K LQ+L
Sbjct: 204 DSIGSQES-------PVAAKSN---GKAQSGHRSATDPQSLYARKRRERINERLKILQNL 253
Query: 315 VPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 346
VP KV + ML+E ++YV+ LQ Q++ LS
Sbjct: 254 VPNGTKVD-ISTMLEEAMHYVKFLQLQIKLLS 284
>gi|223702412|gb|ACN21637.1| putative basic helix-loop-helix protein BHLH13 [Lotus japonicus]
Length = 262
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 291 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 345
D S+A R RRE+ISE+++ LQ LVPG K+ A MLDE I+YV+ L+RQ+ L
Sbjct: 134 DPQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKRQIRLL 187
>gi|125544879|gb|EAY91018.1| hypothetical protein OsI_12623 [Oryza sativa Indica Group]
Length = 310
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 18/152 (11%)
Query: 202 GSSLSEQITSQTVTDSNPRKRKSIQRPKAKETPPTS-----DPKVVAENPEDSNSMRSKQ 256
G+S +I Q D + RKS ++ +K + D + N + + S+
Sbjct: 144 GASNKRKIQEQGRLDDQTKSRKSAKKAGSKRGKKAAQCEGEDGSIAVTNRQSLSCCTSEN 203
Query: 257 DENKSDSSKTKDNSKPVEPPKDYIHVRARRGQ--ATDSHSLAERVRREKISERMKFLQDL 314
D S S PV + +A+ G ATD SL R RRE+I+ER+K LQ+L
Sbjct: 204 DSIGSQES-------PVAAKSN---GKAQSGHRSATDPQSLYARKRRERINERLKILQNL 253
Query: 315 VPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 346
VP KV + ML+E ++YV+ LQ Q++ LS
Sbjct: 254 VPNGTKVD-ISTMLEEAMHYVKFLQLQIKLLS 284
>gi|224069350|ref|XP_002302962.1| predicted protein [Populus trichocarpa]
gi|222844688|gb|EEE82235.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 287 GQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 346
G A D S+A + RRE+ISER+K LQDLVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 232 GPAKDPQSIAAKNRRERISERLKMLQDLVPNGSKVD-LVTMLEKAISYVKFLQLQVKVLA 290
>gi|242052339|ref|XP_002455315.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
gi|241927290|gb|EES00435.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
Length = 290
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 58/122 (47%), Gaps = 17/122 (13%)
Query: 225 IQRPKAKETPPTSDPKVVAENPEDSNSMRSKQDENKSDSSKTKDNSKPVEPPKDYIHVRA 284
IQ P A + P K + E + KQ + SK K P + P+
Sbjct: 153 IQEPGAVQLPAKPPHKRARRDGEVQAAAAKKQCGGGARKSKAKAAPAPTKDPQ------- 205
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEF 344
S+A +VRREKI+E++K LQDLVP KV ML++ I YV+ LQ QV+
Sbjct: 206 ---------SVAAKVRREKIAEKLKVLQDLVPNGTKVD-LVTMLEKAITYVKFLQLQVKV 255
Query: 345 LS 346
L+
Sbjct: 256 LA 257
>gi|356511167|ref|XP_003524301.1| PREDICTED: uncharacterized protein LOC100775296 [Glycine max]
Length = 266
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 291 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 345
D S+A R RRE+ISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 133 DPQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 186
>gi|356528585|ref|XP_003532880.1| PREDICTED: uncharacterized protein LOC100777351 [Glycine max]
Length = 271
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 291 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 345
D S+A R RRE+ISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 138 DPQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 191
>gi|218184992|gb|EEC67419.1| hypothetical protein OsI_34609 [Oryza sativa Indica Group]
Length = 465
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+ +R +A H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ LQ Q
Sbjct: 269 ISTKRSRAAAIHNESERKRRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIDYLKQLQAQ 327
Query: 342 VEF 344
V+
Sbjct: 328 VQV 330
>gi|452030238|gb|AGF92088.1| indehiscent-like protein [Phaseolus vulgaris]
Length = 282
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 291 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 345
D S+A R RRE+ISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 146 DPQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 199
>gi|167999578|ref|XP_001752494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696394|gb|EDQ82733.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 289 ATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 345
+ + S+A R RR+KISER++ L+ L+PG NK+ A MLDE I YV+ LQ QV+ L
Sbjct: 387 SVEPQSVAARHRRKKISERIRVLEKLIPGGNKMD-TATMLDEAIEYVKFLQLQVQIL 442
>gi|334184231|ref|NP_001189527.1| transcription factor bHLH84 [Arabidopsis thaliana]
gi|330251239|gb|AEC06333.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 341
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 26/166 (15%)
Query: 206 SEQITSQTVTDSNPRKRKSIQRPKAKETPPTSDPKVVAENPEDSNSMR------------ 253
S++ T T TD N R K+ + K E ++ E E + R
Sbjct: 149 SKKRTRATTTDKNKRANKARRSQKCVEMSGENENSGEEEYTEKAAGKRKTKPLKPQKTCC 208
Query: 254 SKQDENKSDSSKTKDNSKPVEPPKDYIHVRARRGQATDSHSLAERV-------------R 300
S + N D+ +K++ + + RA RG ATD SL R+ R
Sbjct: 209 SDDESNGGDTFLSKEDGEDSKALNLNGKTRASRGAATDPQSLYARLKQLNKVHCMMVQKR 268
Query: 301 REKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 346
RE+I+ER++ LQ LVP KV + ML+E + YV+ LQ Q++ LS
Sbjct: 269 RERINERLRILQHLVPNGTKVD-ISTMLEEAVQYVKFLQLQIKLLS 313
>gi|359489230|ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 465
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 293 HSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
H+ +ER RR+KI++RMK LQ LVP +K T KA MLDE+I Y++ LQ QV+
Sbjct: 287 HNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVQ 336
>gi|224077304|ref|XP_002305203.1| predicted protein [Populus trichocarpa]
gi|222848167|gb|EEE85714.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 283 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 342
++ G A D S+A + RRE+ISER+K LQDLVP +KV ML++ I+YV+ LQ QV
Sbjct: 232 KSAAGPAKDLQSIAAKNRRERISERLKVLQDLVPNGSKVD-LVTMLEKAISYVKFLQLQV 290
Query: 343 EFLS 346
+ L+
Sbjct: 291 KVLA 294
>gi|357519927|ref|XP_003630252.1| Transcription factor HEC3 [Medicago truncatula]
gi|355524274|gb|AET04728.1| Transcription factor HEC3 [Medicago truncatula]
Length = 275
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 291 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 345
D S+A R RRE+ISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ++ L
Sbjct: 123 DPQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIKLL 176
>gi|356509769|ref|XP_003523618.1| PREDICTED: uncharacterized protein LOC100779202 [Glycine max]
Length = 332
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 282 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 341
+A +G ATD SL R RRE+I +R++ LQ+LVP KV + ML+E + YV+ LQ Q
Sbjct: 240 TKASKGSATDPQSLYARKRRERIDDRLRILQNLVPNGTKVD-ISTMLEEAVQYVKFLQLQ 298
Query: 342 VEFLS 346
+ LS
Sbjct: 299 NKLLS 303
>gi|168039475|ref|XP_001772223.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676554|gb|EDQ63036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 78
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
A+R +A + H+ +ER RR++I+E+M+ LQ+L+P NK T KA ML+E I Y++ LQ Q++
Sbjct: 19 AKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASMLEEAIEYLKMLQLQLQ 77
Query: 344 F 344
Sbjct: 78 V 78
>gi|13486646|dbj|BAB39884.1| unknown protein [Oryza sativa Japonica Group]
Length = 294
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 293 HSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 346
S A +VRRE+ISER+K LQDLVP KV ML++ INYV+ LQ QV+ L+
Sbjct: 209 QSAAAKVRRERISERLKVLQDLVPNGTKVD-LVTMLEKAINYVKFLQLQVKVLA 261
>gi|145712853|gb|ABP96466.1| phytochrome interacting factor 4 [Arabidopsis lyrata subsp.
petraea]
Length = 250
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 43/54 (79%), Gaps = 2/54 (3%)
Query: 285 RRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 338
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K T KA +LD I+Y++SL
Sbjct: 199 RRSRAAEVHNLSER-RRDRINERMKALQELIPHCSK-TDKASILDGAIDYMKSL 250
>gi|115434094|ref|NP_001041805.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|113531336|dbj|BAF03719.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|215766224|dbj|BAG98452.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388931|gb|ADX60270.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 295
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 293 HSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 346
S A +VRRE+ISER+K LQDLVP KV ML++ INYV+ LQ QV+ L+
Sbjct: 210 QSAAAKVRRERISERLKVLQDLVPNGTKVD-LVTMLEKAINYVKFLQLQVKVLA 262
>gi|356502774|ref|XP_003520191.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 274
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
Query: 287 GQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
GQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ QV+
Sbjct: 118 GQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVK 173
>gi|356567480|ref|XP_003551947.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 397
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 284 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQS 337
ARR +A + H+L+ER RR++I+E+MK LQ L+P +K T KA ML+E I Y++S
Sbjct: 197 ARRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSK-TDKASMLEEAIEYLKS 249
>gi|297734539|emb|CBI16590.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 289 ATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 343
A H+ +ER RR+KI++RMK LQ LVP +K T KA MLDE+I Y++ LQ QV+
Sbjct: 29 AAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVQ 82
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.310 0.125 0.357
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,466,436,623
Number of Sequences: 23463169
Number of extensions: 306975935
Number of successful extensions: 1304576
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1662
Number of HSP's successfully gapped in prelim test: 6002
Number of HSP's that attempted gapping in prelim test: 1242531
Number of HSP's gapped (non-prelim): 39592
length of query: 481
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 335
effective length of database: 8,933,572,693
effective search space: 2992746852155
effective search space used: 2992746852155
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 79 (35.0 bits)