Your job contains 1 sequence.
>011622
MPAQKRSLQESHHANNGEQLQGEEQQRQDSFQQSHAKQSRHERQQLELQQNEQQQLEEDQ
KDDEEVEGEGDEEDEENEDDSEGPSSDTSGEKPEFVFVELPEIRKDVQCPICLGIIKKTR
TVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALISALYPDIDKYEE
EELAFHEEERTRNKQIQASIAKIFQRQSEALVKRRTPGKDTASPFMTRPQRNPRTAHLRR
RRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERSAEVRPRRRKRRSGIRSSQPSSSAANS
DGGCIENDLEVGRESRGISPGLVWNPEMLAWGRGGTRSNTRHGSASGCNSKSSRSTRLNK
LVEYLRSLQENNDELDVRLMLVSADTQCAPSLQQPYLCCQPSLSVKQLCEYVSLQTPLQA
EEVEILMVKERLDAKGNQSTPIPTTDQLQILEGQETLAGLRVNHTSNTDHLILAYRQKQS
R
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011622
(481 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2158705 - symbol:RING1A "RING 1A" species:3702... 492 3.1e-85 2
UNIPROTKB|E2RFW1 - symbol:RNF2 "Uncharacterized protein" ... 255 7.0e-22 1
UNIPROTKB|F1S3N6 - symbol:RNF2 "Uncharacterized protein" ... 255 7.0e-22 1
UNIPROTKB|Q7ZWM8 - symbol:rnf2-b "E3 ubiquitin-protein li... 255 7.0e-22 1
UNIPROTKB|A6QLQ0 - symbol:RNF2 "RNF2 protein" species:991... 254 9.0e-22 1
UNIPROTKB|Q99496 - symbol:RNF2 "E3 ubiquitin-protein liga... 254 9.0e-22 1
UNIPROTKB|Q5R9J5 - symbol:RNF2 "E3 ubiquitin-protein liga... 254 9.0e-22 1
UNIPROTKB|Q66J69 - symbol:rnf2-a "E3 ubiquitin-protein li... 254 9.0e-22 1
MGI|MGI:1101759 - symbol:Rnf2 "ring finger protein 2" spe... 254 9.0e-22 1
RGD|1305491 - symbol:Rnf2 "ring finger protein 2" species... 254 9.0e-22 1
UNIPROTKB|E1BQF7 - symbol:RNF2 "Uncharacterized protein" ... 253 1.1e-21 1
UNIPROTKB|A1YER5 - symbol:RING1 "E3 ubiquitin-protein lig... 260 1.3e-21 1
UNIPROTKB|A1YFY1 - symbol:RING1 "E3 ubiquitin-protein lig... 260 1.3e-21 1
UNIPROTKB|A2T6X5 - symbol:RING1 "E3 ubiquitin-protein lig... 260 1.3e-21 1
UNIPROTKB|Q8WMN5 - symbol:RING1 "E3 ubiquitin-protein lig... 260 1.3e-21 1
ZFIN|ZDB-GENE-030131-5243 - symbol:rnf2 "ring finger prot... 252 1.5e-21 1
UNIPROTKB|F1MUV0 - symbol:RING1 "Uncharacterized protein"... 260 1.6e-21 1
MGI|MGI:1101770 - symbol:Ring1 "ring finger protein 1" sp... 261 2.0e-21 1
UNIPROTKB|Q5TJF3 - symbol:RING1 "E3 ubiquitin-protein lig... 260 3.0e-21 1
UNIPROTKB|Q06587 - symbol:RING1 "E3 ubiquitin-protein lig... 260 3.0e-21 1
UNIPROTKB|A5D9P0 - symbol:RING1 "Ring finger protein 1" s... 260 3.0e-21 1
RGD|3576 - symbol:Ring1 "ring finger protein 1" species:1... 260 3.0e-21 1
FB|FBgn0003330 - symbol:Sce "Sex combs extra" species:722... 251 2.5e-20 2
TAIR|locus:2825930 - symbol:AT1G28327 "AT1G28327" species... 179 8.8e-12 1
UNIPROTKB|F1LUN6 - symbol:F1LUN6 "Uncharacterized protein... 125 2.4e-07 1
UNIPROTKB|C9J3G7 - symbol:PCGF3 "Polycomb group RING fing... 124 3.1e-07 1
UNIPROTKB|C9JYD0 - symbol:PCGF3 "Polycomb group RING fing... 124 3.1e-07 1
UNIPROTKB|D6RAS2 - symbol:TRIM60 "Tripartite motif-contai... 115 3.0e-06 1
UNIPROTKB|D4A0Y0 - symbol:D4A0Y0 "Uncharacterized protein... 115 3.0e-06 1
UNIPROTKB|Q495X7 - symbol:TRIM60 "Tripartite motif-contai... 115 5.6e-06 2
UNIPROTKB|F1PGG1 - symbol:PCGF3 "Uncharacterized protein"... 130 7.5e-06 1
UNIPROTKB|Q5T8Z4 - symbol:BMI1 "Polycomb complex protein ... 111 8.1e-06 1
UNIPROTKB|Q5T8Z6 - symbol:BMI1 "Polycomb complex protein ... 111 8.1e-06 1
UNIPROTKB|I3LAF0 - symbol:PCGF3 "Uncharacterized protein"... 124 1.1e-05 1
WB|WBGene00020496 - symbol:spat-3 species:6239 "Caenorhab... 138 1.1e-05 2
UNIPROTKB|Q5T8Z5 - symbol:BMI1 "Polycomb complex protein ... 109 1.3e-05 1
ZFIN|ZDB-GENE-080219-13 - symbol:trim35-39 "tripartite mo... 130 1.9e-05 1
UNIPROTKB|Q07G17 - symbol:pcgf3 "Polycomb group RING fing... 123 2.2e-05 2
MGI|MGI:1916837 - symbol:Pcgf3 "polycomb group ring finge... 124 2.2e-05 1
UNIPROTKB|E1BAF7 - symbol:E1BAF7 "Uncharacterized protein... 124 2.3e-05 1
UNIPROTKB|Q2KJ29 - symbol:PCGF3 "Polycomb group RING fing... 124 2.3e-05 1
UNIPROTKB|Q3KNV8 - symbol:PCGF3 "Polycomb group RING fing... 124 2.3e-05 1
ZFIN|ZDB-GENE-110920-8 - symbol:trim35-20 "tripartite mot... 129 2.5e-05 1
UNIPROTKB|F1N8I5 - symbol:BRCA1 "Uncharacterized protein"... 131 3.1e-05 2
UNIPROTKB|J9P325 - symbol:PCGF3 "Uncharacterized protein"... 124 3.1e-05 1
UNIPROTKB|F1NLA3 - symbol:PCGF3 "Uncharacterized protein"... 123 3.1e-05 1
RGD|1562871 - symbol:RGD1562871 "similar to BMI1-like pro... 122 3.4e-05 1
UNIPROTKB|I3LDC6 - symbol:LOC100524364 "Uncharacterized p... 105 3.6e-05 1
UNIPROTKB|J3KSI2 - symbol:RNF138 "E3 ubiquitin-protein li... 104 4.7e-05 1
UNIPROTKB|J3QKM8 - symbol:RNF138 "E3 ubiquitin-protein li... 104 4.7e-05 1
UNIPROTKB|B3KRH1 - symbol:RNF2 "Ring finger protein 2, is... 122 5.0e-05 1
TAIR|locus:2133109 - symbol:BRCA1 "breast cancer suscepti... 129 6.8e-05 1
ZFIN|ZDB-GENE-081030-23 - symbol:trim35-34 "tripartite mo... 125 6.8e-05 1
ZFIN|ZDB-GENE-061009-3 - symbol:trim35-31 "tripartite mot... 125 6.9e-05 1
UNIPROTKB|J3KT13 - symbol:PCGF2 "Polycomb group ring fing... 120 8.0e-05 1
ZFIN|ZDB-GENE-040801-199 - symbol:trim35-36 "tripartite m... 124 8.7e-05 1
UNIPROTKB|C9JWN8 - symbol:TRIM5 "Tripartite motif-contain... 101 9.9e-05 1
ZFIN|ZDB-GENE-071004-80 - symbol:zgc:171260 "zgc:171260" ... 122 0.00015 1
UNIPROTKB|E7EQW4 - symbol:BRCA1 "Breast cancer type 1 sus... 116 0.00015 1
MGI|MGI:99161 - symbol:Pcgf2 "polycomb group ring finger ... 120 0.00015 1
RGD|1305097 - symbol:Pcgf2 "polycomb group ring finger 2"... 120 0.00015 1
UNIPROTKB|E1BMR4 - symbol:PCGF2 "Uncharacterized protein"... 120 0.00015 1
UNIPROTKB|J9NUE7 - symbol:PCGF2 "Uncharacterized protein"... 120 0.00015 1
UNIPROTKB|P35227 - symbol:PCGF2 "Polycomb group RING fing... 120 0.00015 1
UNIPROTKB|E2QY05 - symbol:PCGF2 "Uncharacterized protein"... 120 0.00016 1
UNIPROTKB|H0Y340 - symbol:RFWD2 "E3 ubiquitin-protein lig... 99 0.00016 1
ZFIN|ZDB-GENE-080723-33 - symbol:pcgf5a "polycomb group r... 116 0.00017 1
ZFIN|ZDB-GENE-041114-35 - symbol:trim35-29 "tripartite mo... 121 0.00019 1
TAIR|locus:2055435 - symbol:AT2G34000 species:3702 "Arabi... 106 0.00020 1
MGI|MGI:2685640 - symbol:Trim75 "tripartite motif-contain... 121 0.00020 1
UNIPROTKB|Q95153 - symbol:BRCA1 "Breast cancer type 1 sus... 124 0.00020 2
TAIR|locus:2094608 - symbol:AT3G23060 species:3702 "Arabi... 122 0.00022 2
UNIPROTKB|J9P2L6 - symbol:PCGF5 "Uncharacterized protein"... 114 0.00028 1
ZFIN|ZDB-GENE-060503-673 - symbol:trim35-21 "tripartite m... 121 0.00029 2
UNIPROTKB|Q4QR06 - symbol:pcgf1 "Polycomb group RING fing... 113 0.00031 2
RGD|1583513 - symbol:Pcgf5 "polycomb group ring finger 5"... 114 0.00031 1
UNIPROTKB|H0YAI5 - symbol:RNF4 "E3 ubiquitin-protein liga... 96 0.00034 1
MGI|MGI:2664992 - symbol:Trim50 "tripartite motif-contain... 119 0.00035 1
UNIPROTKB|F1PTU1 - symbol:PCGF5 "Uncharacterized protein"... 114 0.00037 1
UNIPROTKB|A0JN86 - symbol:PCGF5 "Polycomb group RING fing... 114 0.00038 1
UNIPROTKB|E1BYN8 - symbol:PCGF5 "Uncharacterized protein"... 114 0.00038 1
UNIPROTKB|F1PTT1 - symbol:PCGF5 "Uncharacterized protein"... 114 0.00038 1
UNIPROTKB|Q86SE9 - symbol:PCGF5 "Polycomb group RING fing... 114 0.00038 1
MGI|MGI:1923505 - symbol:Pcgf5 "polycomb group ring finge... 114 0.00038 1
RGD|1307403 - symbol:Bmi1 "Bmi1 polycomb ring finger onco... 111 0.00040 1
ZFIN|ZDB-GENE-081030-6 - symbol:trim35-38 "tripartite mot... 118 0.00041 1
ZFIN|ZDB-GENE-080213-8 - symbol:zgc:172170 "zgc:172170" s... 118 0.00041 1
UNIPROTKB|C9JNB9 - symbol:TRIM59 "Tripartite motif-contai... 95 0.00044 1
UNIPROTKB|Q5T8Z1 - symbol:BMI1 "Polycomb complex protein ... 111 0.00045 1
RGD|631346 - symbol:Trim50 "tripartite motif-containing 5... 118 0.00045 1
UNIPROTKB|Q810I1 - symbol:Trim50 "E3 ubiquitin-protein li... 118 0.00045 1
FB|FBgn0037384 - symbol:dgrn "degringolade" species:7227 ... 115 0.00048 1
ZFIN|ZDB-GENE-060512-34 - symbol:pcgf5b "polycomb group r... 112 0.00050 1
UNIPROTKB|Q28H21 - symbol:pcgf1 "Polycomb group RING fing... 113 0.00051 1
WB|WBGene00000264 - symbol:brc-1 species:6239 "Caenorhabd... 98 0.00052 2
UNIPROTKB|B6VQ60 - symbol:brc-1 "Protein BRC-1, isoform a... 98 0.00052 2
UNIPROTKB|I3LDV4 - symbol:I3LDV4 "Uncharacterized protein... 113 0.00056 1
UNIPROTKB|D6RAL3 - symbol:SH3RF1 "E3 ubiquitin-protein li... 94 0.00057 1
UNIPROTKB|D6RHX5 - symbol:SH3RF1 "E3 ubiquitin-protein li... 94 0.00057 1
UNIPROTKB|Q5EBN2 - symbol:TRIM61 "Putative tripartite mot... 110 0.00061 1
WARNING: Descriptions of 12 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2158705 [details] [associations]
symbol:RING1A "RING 1A" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008270 "zinc
ion binding" evidence=IEA;ISS] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010076 "maintenance of floral meristem identity"
evidence=IMP] [GO:0010077 "maintenance of inflorescence meristem
identity" evidence=IMP] [GO:0010492 "maintenance of shoot apical
meristem identity" evidence=IMP] [GO:0035102 "PRC1 complex"
evidence=IPI] [GO:0045814 "negative regulation of gene expression,
epigenetic" evidence=IGI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IGI] EMBL:CP002688
GO:GO:0016874 GO:GO:0035102 GO:GO:0045814 KO:K10695 IPI:IPI00938631
RefSeq:NP_001154760.1 UniGene:At.30083 ProteinModelPortal:F4K8U4
SMR:F4K8U4 PRIDE:F4K8U4 EnsemblPlants:AT5G44280.2 GeneID:834451
KEGG:ath:AT5G44280 OMA:NASEAHE Uniprot:F4K8U4
Length = 525
Score = 492 (178.3 bits), Expect = 3.1e-85, Sum P(2) = 3.1e-85
Identities = 103/191 (53%), Positives = 139/191 (72%)
Query: 301 DGGCIENDLEVGRESRGISPGLVWNPEMLAWGRGGTRSNTRHGS-ASGCNSKSSRSTRLN 359
+G C +ND EV R+++GISPGLVWNPE+LAWGRGGTRSNTRHG+ SG +SKS R+ R+N
Sbjct: 334 NGNCADNDTEVYRDTKGISPGLVWNPEILAWGRGGTRSNTRHGNNTSGGSSKSVRNARVN 393
Query: 360 KLVEYLRSLQENND-ELDVRLMLVSADTQCAPSLQQPYLCCQPSLSVKQLCEYVSLQTPL 418
KLVEYLRS + + ELD+ + LVS DT+C P L QPYLCC+P+L VKQL E+V+LQ L
Sbjct: 394 KLVEYLRSSVDGSSVELDIHVKLVSLDTKCIPDLPQPYLCCRPTLLVKQLREFVALQIHL 453
Query: 419 QAEEVEILMVKERL--DAK-GNQSTPIPTT-----DQLQILEGQETLAGLRVNH-TSNTD 469
+ EEVE+L+ + R+ DA N P + D++ LE ETL+ L+++ +S+
Sbjct: 454 KTEEVELLVTRRRVGEDAAIENLPAVTPASAAASKDEMLSLEDNETLSRLKIDFISSHEQ 513
Query: 470 HLILAYRQKQS 480
HLI+AYR+KQ+
Sbjct: 514 HLIIAYRKKQT 524
Score = 380 (138.8 bits), Expect = 3.1e-85, Sum P(2) = 3.1e-85
Identities = 89/167 (53%), Positives = 110/167 (65%)
Query: 89 SGEKPEFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRL----GNNE 144
SG++ EF+ ++L EIRKDVQCPICL +K R + ++ ++C S + NNE
Sbjct: 116 SGDQSEFMEIDLGEIRKDVQCPICLVGMKFLRLFIS-YYKENKDCDGMSPQFCATFKNNE 174
Query: 145 CPACRTHCASRRSLRDDPNYDALISALYPDIDKYXXXXXXXXXXXRTRNKQIQASIAKIF 204
CPACR HCASRRSLRDDP +DALI+AL+ +ID Y RNKQIQASIA+I
Sbjct: 175 CPACRKHCASRRSLRDDPKFDALIAALFTNIDSYEEEELAFHEDEMARNKQIQASIAQIS 234
Query: 205 QRQSEALVKRRTPGKDTASPFMTRPQRNPRTAH-LRRRRNSRGTEHQ 250
QRQSEALVKRR+ GK+ A+ M R+PR A RRRRNSR E Q
Sbjct: 235 QRQSEALVKRRSLGKE-AAVLM----RSPRIASGSRRRRNSRNMEQQ 276
Score = 38 (18.4 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 336 TRSNTRHGSASGCNSKS 352
T +T+H S+SG N +
Sbjct: 318 TSRSTQHPSSSGANKNN 334
>UNIPROTKB|E2RFW1 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071535 "RING-like zinc finger domain
binding" evidence=IEA] [GO:0071339 "MLL1 complex" evidence=IEA]
[GO:0035518 "histone H2A monoubiquitination" evidence=IEA]
[GO:0035102 "PRC1 complex" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001739 "sex
chromatin" evidence=IEA] [GO:0001702 "gastrulation with mouth
forming second" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 GO:GO:0000122 GO:GO:0001702
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0000278 GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 OMA:MELYFAP EMBL:AAEX03005159
Ensembl:ENSCAFT00000021407 Uniprot:E2RFW1
Length = 337
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 52/125 (41%), Positives = 69/125 (55%)
Query: 96 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 155
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 156 RSLRDDPNYDALISALYPDIDKYXXXXXXXXXXXRTRNKQIQASIAKIFQR-QSEALVKR 214
RSLR DPN+DALIS +YP D+Y N Q QA I + + +A+ R
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYEAHQERVLARINKHNNQ-QALSHSIEEGLKIQAMNSR 156
Query: 215 RTPGK 219
GK
Sbjct: 157 LQRGK 161
>UNIPROTKB|F1S3N6 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071535 "RING-like zinc finger domain binding"
evidence=IEA] [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0035518
"histone H2A monoubiquitination" evidence=IEA] [GO:0035102 "PRC1
complex" evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA]
[GO:0009948 "anterior/posterior axis specification" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001739 "sex chromatin"
evidence=IEA] [GO:0001702 "gastrulation with mouth forming second"
evidence=IEA] [GO:0000278 "mitotic cell cycle" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278
GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 KO:K10695 OMA:MELYFAP EMBL:CU915492
RefSeq:XP_003130427.1 Ensembl:ENSSSCT00000016959 GeneID:100517846
KEGG:ssc:100517846 Uniprot:F1S3N6
Length = 336
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 51/124 (41%), Positives = 66/124 (53%)
Query: 96 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 155
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 156 RSLRDDPNYDALISALYPDIDKYXXXXXXXXXXXRTRNKQIQASIAKIFQRQSEALVKRR 215
RSLR DPN+DALIS +YP D+Y N Q QA I + + R
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYEAHQERVLARINKHNNQ-QALCHSIEEGLKIQAMNRL 156
Query: 216 TPGK 219
GK
Sbjct: 157 QRGK 160
>UNIPROTKB|Q7ZWM8 [details] [associations]
symbol:rnf2-b "E3 ubiquitin-protein ligase RING2-B"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS] [GO:0071339
"MLL1 complex" evidence=ISS] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102
HOVERGEN:HBG079942 EMBL:BC046935 UniGene:Xl.76096
ProteinModelPortal:Q7ZWM8 SMR:Q7ZWM8 Xenbase:XB-GENE-6493980
Uniprot:Q7ZWM8
Length = 343
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 48/108 (44%), Positives = 66/108 (61%)
Query: 103 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 162
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 41 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 100
Query: 163 NYDALISALYPDIDKYXXXXXXXXXX-XRTRNKQ-IQASIAKIFQRQS 208
N+DALIS +YP D+Y R N+Q + +SI + + Q+
Sbjct: 101 NFDALISKIYPSRDEYEAHQDRVLAKLSRLHNQQALSSSIEEGLKMQA 148
>UNIPROTKB|A6QLQ0 [details] [associations]
symbol:RNF2 "RNF2 protein" species:9913 "Bos taurus"
[GO:0071535 "RING-like zinc finger domain binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=IEA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0035102 "PRC1 complex"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0009948
"anterior/posterior axis specification" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0000278
"mitotic cell cycle" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 GO:GO:0000122
GO:GO:0001702 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0009948 GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907
GO:GO:0071339 GO:GO:0000278 GO:GO:0035518 GO:GO:0035102
GO:GO:0001739 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 OMA:MELYFAP
CTD:6045 OrthoDB:EOG4R7VB1 EMBL:DAAA02043606 EMBL:BC148044
IPI:IPI00867396 RefSeq:NP_001094673.1 UniGene:Bt.102990 SMR:A6QLQ0
STRING:A6QLQ0 Ensembl:ENSBTAT00000000025 GeneID:540090
KEGG:bta:540090 InParanoid:A6QLQ0 NextBio:20878411 Uniprot:A6QLQ0
Length = 336
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 45/100 (45%), Positives = 58/100 (58%)
Query: 96 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 155
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 156 RSLRDDPNYDALISALYPDIDKYXXXXXXXXXXXRTRNKQ 195
RSLR DPN+DALIS +YP D+Y N Q
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYEAHQERVLARINKHNNQ 137
>UNIPROTKB|Q99496 [details] [associations]
symbol:RNF2 "E3 ubiquitin-protein ligase RING2"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000278 "mitotic cell cycle" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0001739
"sex chromatin" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071339 "MLL1 complex"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031519 "PcG
protein complex" evidence=IDA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IDA] [GO:0035102 "PRC1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0071535
"RING-like zinc finger domain binding" evidence=IPI] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 EMBL:CH471067 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009948 GO:GO:0016604 GO:GO:0000151
InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278 CleanEx:HS_BAP1
GO:GO:0035518 GO:GO:0035102 PDB:2H0D PDB:3RPG PDBsum:2H0D
PDBsum:3RPG PDB:3GS2 PDBsum:3GS2 GO:GO:0001739 EMBL:AL109865
eggNOG:NOG324386 HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695
OMA:MELYFAP CTD:6045 OrthoDB:EOG4R7VB1 EMBL:Y10571 EMBL:AF141327
EMBL:AK314793 EMBL:BC012583 IPI:IPI00026993 RefSeq:NP_009143.1
UniGene:Hs.591490 PDB:3H8H PDB:3IXS PDBsum:3H8H PDBsum:3IXS
ProteinModelPortal:Q99496 SMR:Q99496 DIP:DIP-40034N IntAct:Q99496
MINT:MINT-1420125 STRING:Q99496 PhosphoSite:Q99496 DMDM:62901044
PaxDb:Q99496 PRIDE:Q99496 DNASU:6045 Ensembl:ENST00000367510
Ensembl:ENST00000453650 GeneID:6045 KEGG:hsa:6045 UCSC:uc001grc.1
GeneCards:GC01P185014 HGNC:HGNC:10061 HPA:HPA026803 MIM:608985
neXtProt:NX_Q99496 PharmGKB:PA34426 InParanoid:Q99496
PhylomeDB:Q99496 EvolutionaryTrace:Q99496 GenomeRNAi:6045
NextBio:23553 ArrayExpress:Q99496 Bgee:Q99496 CleanEx:HS_RNF2
Genevestigator:Q99496 GermOnline:ENSG00000121481 Uniprot:Q99496
Length = 336
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 45/100 (45%), Positives = 58/100 (58%)
Query: 96 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 155
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 156 RSLRDDPNYDALISALYPDIDKYXXXXXXXXXXXRTRNKQ 195
RSLR DPN+DALIS +YP D+Y N Q
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYEAHQERVLARINKHNNQ 137
>UNIPROTKB|Q5R9J5 [details] [associations]
symbol:RNF2 "E3 ubiquitin-protein ligase RING2"
species:9601 "Pongo abelii" [GO:0000151 "ubiquitin ligase complex"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0031519 "PcG protein complex" evidence=ISS] [GO:0035102 "PRC1
complex" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005694 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0006351
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000151
InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102 HOVERGEN:HBG079942
KO:K10695 CTD:6045 EMBL:CR859392 RefSeq:NP_001127433.1
UniGene:Pab.7792 ProteinModelPortal:Q5R9J5 SMR:Q5R9J5 PRIDE:Q5R9J5
GeneID:100174504 KEGG:pon:100174504 InParanoid:Q5R9J5
Uniprot:Q5R9J5
Length = 336
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 45/100 (45%), Positives = 58/100 (58%)
Query: 96 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 155
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 156 RSLRDDPNYDALISALYPDIDKYXXXXXXXXXXXRTRNKQ 195
RSLR DPN+DALIS +YP D+Y N Q
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYEAHQERVLARINKHNNQ 137
>UNIPROTKB|Q66J69 [details] [associations]
symbol:rnf2-a "E3 ubiquitin-protein ligase RING2-A"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS] [GO:0071339
"MLL1 complex" evidence=ISS] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102
HOVERGEN:HBG079942 KO:K10695 EMBL:BC081039 RefSeq:NP_001087647.1
UniGene:Xl.6549 ProteinModelPortal:Q66J69 SMR:Q66J69 GeneID:447471
KEGG:xla:447471 CTD:447471 Xenbase:XB-GENE-6253865 Uniprot:Q66J69
Length = 344
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 48/108 (44%), Positives = 66/108 (61%)
Query: 103 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 162
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 163 NYDALISALYPDIDKYXXXXXXXXXXX-RTRNKQ-IQASIAKIFQRQS 208
N+DALIS +YP D+Y R N+Q + +SI + + Q+
Sbjct: 102 NFDALISKIYPSRDEYEAHQDRVLAKLNRLHNQQALSSSIEEGLKMQA 149
>MGI|MGI:1101759 [details] [associations]
symbol:Rnf2 "ring finger protein 2" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IMP] [GO:0000151 "ubiquitin
ligase complex" evidence=ISO;IDA] [GO:0000278 "mitotic cell cycle"
evidence=IMP] [GO:0001702 "gastrulation with mouth forming second"
evidence=IMP] [GO:0001739 "sex chromatin" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=ISO] [GO:0009948 "anterior/posterior axis
specification" evidence=IMP] [GO:0016574 "histone ubiquitination"
evidence=IGI;IDA] [GO:0016604 "nuclear body" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=ISO;IDA] [GO:0035102 "PRC1 complex"
evidence=ISO] [GO:0035518 "histone H2A monoubiquitination"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=ISO] [GO:0071535 "RING-like
zinc finger domain binding" evidence=ISO] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1101759
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278
GO:GO:0035518 GO:GO:0031519 GO:GO:0035102 GO:GO:0016574 PDB:2CKL
PDBsum:2CKL GO:GO:0001739 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 KO:K10695 OMA:MELYFAP CTD:6045 OrthoDB:EOG4R7VB1
EMBL:Y12880 EMBL:Y12783 EMBL:AK145767 EMBL:AK012358 EMBL:AK013124
EMBL:AK030319 EMBL:AK090066 EMBL:CT010297 EMBL:BC020122
IPI:IPI00133880 RefSeq:NP_035407.1 UniGene:Mm.474038
ProteinModelPortal:Q9CQJ4 SMR:Q9CQJ4 IntAct:Q9CQJ4
MINT:MINT-1341250 STRING:Q9CQJ4 PhosphoSite:Q9CQJ4 PaxDb:Q9CQJ4
PRIDE:Q9CQJ4 Ensembl:ENSMUST00000076110 GeneID:19821 KEGG:mmu:19821
UCSC:uc007cyx.1 InParanoid:Q9CQJ4 EvolutionaryTrace:Q9CQJ4
NextBio:297285 Bgee:Q9CQJ4 CleanEx:MM_RNF2 Genevestigator:Q9CQJ4
GermOnline:ENSMUSG00000026484 Uniprot:Q9CQJ4
Length = 336
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 45/100 (45%), Positives = 58/100 (58%)
Query: 96 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 155
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 156 RSLRDDPNYDALISALYPDIDKYXXXXXXXXXXXRTRNKQ 195
RSLR DPN+DALIS +YP D+Y N Q
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYEAHQERVLARINKHNNQ 137
>RGD|1305491 [details] [associations]
symbol:Rnf2 "ring finger protein 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000151
"ubiquitin ligase complex" evidence=ISO;ISS] [GO:0000278 "mitotic
cell cycle" evidence=IEA;ISO] [GO:0001702 "gastrulation with mouth
forming second" evidence=IEA;ISO] [GO:0001739 "sex chromatin"
evidence=IEA;ISO] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISO;ISS] [GO:0009948 "anterior/posterior axis
specification" evidence=IEA;ISO] [GO:0016574 "histone
ubiquitination" evidence=ISO] [GO:0016604 "nuclear body"
evidence=IEA;ISO] [GO:0031519 "PcG protein complex"
evidence=ISO;ISS] [GO:0035102 "PRC1 complex" evidence=ISO;ISS]
[GO:0035518 "histone H2A monoubiquitination" evidence=IEA;ISO]
[GO:0071339 "MLL1 complex" evidence=ISO;ISS] [GO:0071535 "RING-like
zinc finger domain binding" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 RGD:1305491 Prosite:PS00518
GO:GO:0005694 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0035102 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 CTD:6045
OrthoDB:EOG4R7VB1 EMBL:BC098941 IPI:IPI00950204
RefSeq:NP_001020838.1 UniGene:Rn.19719 ProteinModelPortal:Q4KLY4
SMR:Q4KLY4 STRING:Q4KLY4 PhosphoSite:Q4KLY4
Ensembl:ENSRNOT00000065944 GeneID:304850 KEGG:rno:304850
UCSC:RGD:1305491 InParanoid:Q4KLY4 NextBio:653721
ArrayExpress:Q4KLY4 Genevestigator:Q4KLY4
GermOnline:ENSRNOG00000002454 Uniprot:Q4KLY4
Length = 308
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 45/100 (45%), Positives = 58/100 (58%)
Query: 96 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 155
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 156 RSLRDDPNYDALISALYPDIDKYXXXXXXXXXXXRTRNKQ 195
RSLR DPN+DALIS +YP D+Y N Q
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYEAHQERVLARINKHNNQ 137
>UNIPROTKB|E1BQF7 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0001702 "gastrulation with mouth forming second"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0035102
"PRC1 complex" evidence=IEA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0071339 "MLL1 complex"
evidence=IEA] [GO:0071535 "RING-like zinc finger domain binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682
GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0000278 GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 KO:K10695 OMA:MELYFAP CTD:6045
EMBL:AADN02034211 IPI:IPI00572800 RefSeq:XP_422295.2
ProteinModelPortal:E1BQF7 Ensembl:ENSGALT00000007706 GeneID:424452
KEGG:gga:424452 NextBio:20826782 Uniprot:E1BQF7
Length = 336
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 43/83 (51%), Positives = 56/83 (67%)
Query: 96 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 155
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 156 RSLRDDPNYDALISALYPDIDKY 178
RSLR DPN+DALIS +YP D+Y
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEY 120
>UNIPROTKB|A1YER5 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9595 "Gorilla gorilla gorilla" [GO:0031519 "PcG protein
complex" evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035102
HOVERGEN:HBG079942 EMBL:DQ976446 ProteinModelPortal:A1YER5
SMR:A1YER5 PRIDE:A1YER5 Uniprot:A1YER5
Length = 377
Score = 260 (96.6 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 52/123 (42%), Positives = 72/123 (58%)
Query: 103 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 162
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 13 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 72
Query: 163 NYDALISALYPDIDKYXXXXXXXXXX-XRTRNKQ-IQASIAKIFQRQS---EALVKRRTP 217
N+DALIS +YP ++Y R N+Q + +SI + + Q+ V+R P
Sbjct: 73 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPIP 132
Query: 218 GKD 220
G D
Sbjct: 133 GSD 135
>UNIPROTKB|A1YFY1 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9597 "Pan paniscus" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035102
HOVERGEN:HBG079942 EMBL:DQ977176 ProteinModelPortal:A1YFY1
SMR:A1YFY1 Uniprot:A1YFY1
Length = 377
Score = 260 (96.6 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 52/123 (42%), Positives = 72/123 (58%)
Query: 103 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 162
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 13 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 72
Query: 163 NYDALISALYPDIDKYXXXXXXXXXX-XRTRNKQ-IQASIAKIFQRQS---EALVKRRTP 217
N+DALIS +YP ++Y R N+Q + +SI + + Q+ V+R P
Sbjct: 73 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPIP 132
Query: 218 GKD 220
G D
Sbjct: 133 GSD 135
>UNIPROTKB|A2T6X5 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9598 "Pan troglodytes" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0048593 GO:GO:0000151
InterPro:IPR017907 GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
CTD:6015 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW
OrthoDB:EOG4SXND4 EMBL:DQ977325 RefSeq:NP_001074951.1
UniGene:Ptr.3708 ProteinModelPortal:A2T6X5 SMR:A2T6X5 STRING:A2T6X5
Ensembl:ENSPTRT00000065372 GeneID:462604 KEGG:ptr:462604
InParanoid:A2T6X5 NextBio:20841844 Uniprot:A2T6X5
Length = 377
Score = 260 (96.6 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 52/123 (42%), Positives = 72/123 (58%)
Query: 103 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 162
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 13 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 72
Query: 163 NYDALISALYPDIDKYXXXXXXXXXX-XRTRNKQ-IQASIAKIFQRQS---EALVKRRTP 217
N+DALIS +YP ++Y R N+Q + +SI + + Q+ V+R P
Sbjct: 73 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPIP 132
Query: 218 GKD 220
G D
Sbjct: 133 GSD 135
>UNIPROTKB|Q8WMN5 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9544 "Macaca mulatta" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035102 CTD:6015
eggNOG:NOG324386 HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695
OrthoDB:EOG4SXND4 EMBL:AJ421778 RefSeq:NP_001108431.1
UniGene:Mmu.17368 ProteinModelPortal:Q8WMN5 SMR:Q8WMN5
STRING:Q8WMN5 GeneID:718137 KEGG:mcc:718137 InParanoid:Q8WMN5
NextBio:19978408 Uniprot:Q8WMN5
Length = 377
Score = 260 (96.6 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 52/123 (42%), Positives = 72/123 (58%)
Query: 103 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 162
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 13 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 72
Query: 163 NYDALISALYPDIDKYXXXXXXXXXX-XRTRNKQ-IQASIAKIFQRQS---EALVKRRTP 217
N+DALIS +YP ++Y R N+Q + +SI + + Q+ V+R P
Sbjct: 73 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPIP 132
Query: 218 GKD 220
G D
Sbjct: 133 GSD 135
>ZFIN|ZDB-GENE-030131-5243 [details] [associations]
symbol:rnf2 "ring finger protein 2" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0033339 "pectoral fin development" evidence=IMP] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0016604 "nuclear body"
evidence=ISS] [GO:0009948 "anterior/posterior axis specification"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0000278
"mitotic cell cycle" evidence=ISS] [GO:0035102 "PRC1 complex"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
ZFIN:ZDB-GENE-030131-5243 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0033339 GO:GO:0071339
GO:GO:0035102 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 EMBL:AY576996
EMBL:BC044472 EMBL:AF196346 IPI:IPI00499481 RefSeq:NP_571288.1
UniGene:Dr.31086 ProteinModelPortal:Q803I4 SMR:Q803I4 STRING:Q803I4
Ensembl:ENSDART00000017034 GeneID:327035 KEGG:dre:327035 CTD:6045
InParanoid:Q803I4 OrthoDB:EOG4R7VB1 NextBio:20809851 Bgee:Q803I4
Uniprot:Q803I4
Length = 336
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 42/76 (55%), Positives = 54/76 (71%)
Query: 103 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 162
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 45 LHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDP 104
Query: 163 NYDALISALYPDIDKY 178
N+DALIS +YP D+Y
Sbjct: 105 NFDALISKIYPSRDEY 120
>UNIPROTKB|F1MUV0 [details] [associations]
symbol:RING1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048593 "camera-type eye morphogenesis" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0035102 "PRC1 complex" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001739 "sex chromatin" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0016604 GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907
GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 OMA:QSASKTW EMBL:DAAA02054894
EMBL:DAAA02054895 IPI:IPI00718372 Ensembl:ENSBTAT00000054269
ArrayExpress:F1MUV0 Uniprot:F1MUV0
Length = 382
Score = 260 (96.6 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 52/123 (42%), Positives = 72/123 (58%)
Query: 103 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 162
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 17 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 76
Query: 163 NYDALISALYPDIDKYXXXXXXXXXX-XRTRNKQ-IQASIAKIFQRQS---EALVKRRTP 217
N+DALIS +YP ++Y R N+Q + +SI + + Q+ V+R P
Sbjct: 77 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 136
Query: 218 GKD 220
G D
Sbjct: 137 GSD 139
>MGI|MGI:1101770 [details] [associations]
symbol:Ring1 "ring finger protein 1" species:10090 "Mus
musculus" [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0001739 "sex chromatin" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI;IMP] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016574 "histone ubiquitination"
evidence=IGI;IDA] [GO:0016604 "nuclear body" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=ISO;IDA] [GO:0035102 "PRC1 complex"
evidence=ISO] [GO:0035518 "histone H2A monoubiquitination"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048593 "camera-type eye morphogenesis"
evidence=IGI] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1101770 Pfam:PF00097
Prosite:PS00518 GO:GO:0005737 GO:GO:0045892 GO:GO:0009952
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0016604 GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907
EMBL:AF100956 GO:GO:0035518 GO:GO:0031519 GO:GO:0035102
GO:GO:0016574 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW OrthoDB:EOG4SXND4
EMBL:Y12881 EMBL:AK154962 EMBL:AK155509 EMBL:CT010219 EMBL:BC009070
EMBL:BC082771 IPI:IPI00344616 IPI:IPI00742283 IPI:IPI00742392
RefSeq:NP_033092.3 UniGene:Mm.20343 ProteinModelPortal:O35730
SMR:O35730 IntAct:O35730 MINT:MINT-158295 STRING:O35730
PhosphoSite:O35730 PaxDb:O35730 PRIDE:O35730
Ensembl:ENSMUST00000025183 GeneID:19763 KEGG:mmu:19763
UCSC:uc008cas.2 InParanoid:O35730 NextBio:297212 Bgee:O35730
CleanEx:MM_RING1 Genevestigator:O35730
GermOnline:ENSMUSG00000024325 Uniprot:O35730
Length = 406
Score = 261 (96.9 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 54/127 (42%), Positives = 75/127 (59%)
Query: 103 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 162
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 163 NYDALISALYPDIDKYXXXXXXXXXX-XRTRNKQ-IQASIAKIFQRQS---EALVKRRTP 217
N+DALIS +YP ++Y R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 161
Query: 218 GKD-TAS 223
G D TA+
Sbjct: 162 GSDQTAT 168
>UNIPROTKB|Q5TJF3 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9615 "Canis lupus familiaris" [GO:0035102 "PRC1 complex"
evidence=ISS] [GO:0031519 "PcG protein complex" evidence=ISS]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0048593 "camera-type
eye morphogenesis" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0035518 "histone
H2A monoubiquitination" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001739 "sex chromatin"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0048593 GO:GO:0000151
InterPro:IPR017907 EMBL:AJ630366 GO:GO:0035518 GO:GO:0035102
GO:GO:0001739 RefSeq:NP_001041593.1 UniGene:Cfa.40924
ProteinModelPortal:Q5TJF3 SMR:Q5TJF3 STRING:Q5TJF3
Ensembl:ENSCAFT00000001442 Ensembl:ENSCAFT00000044064 GeneID:607905
KEGG:cfa:607905 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 InParanoid:Q5TJF3 KO:K10695 OMA:QSASKTW
OrthoDB:EOG4SXND4 NextBio:20893594 Uniprot:Q5TJF3
Length = 406
Score = 260 (96.6 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 52/123 (42%), Positives = 72/123 (58%)
Query: 103 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 162
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 163 NYDALISALYPDIDKYXXXXXXXXXX-XRTRNKQ-IQASIAKIFQRQS---EALVKRRTP 217
N+DALIS +YP ++Y R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 161
Query: 218 GKD 220
G D
Sbjct: 162 GSD 164
>UNIPROTKB|Q06587 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0048593 "camera-type eye
morphogenesis" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0016568 "chromatin modification" evidence=NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0031519 "PcG protein complex" evidence=IDA]
[GO:0035518 "histone H2A monoubiquitination" evidence=IDA]
[GO:0035102 "PRC1 complex" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0048593 GO:GO:0000151
InterPro:IPR017907 EMBL:AL031228 GO:GO:0035518 GO:GO:0035102
EMBL:AL645940 EMBL:AL844527 EMBL:CR759733 EMBL:CR759786
EMBL:AL713971 EMBL:CR847841 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW
OrthoDB:EOG4SXND4 EMBL:Z14000 EMBL:BT007352 EMBL:AK289355
EMBL:CR547129 EMBL:BC002922 EMBL:BC051866 IPI:IPI00455876
IPI:IPI00641330 PIR:A47380 RefSeq:NP_002922.2 UniGene:Hs.631989
ProteinModelPortal:Q06587 SMR:Q06587 DIP:DIP-42043N IntAct:Q06587
MINT:MINT-1327105 STRING:Q06587 PhosphoSite:Q06587 DMDM:90110053
PaxDb:Q06587 PeptideAtlas:Q06587 PRIDE:Q06587 DNASU:6015
Ensembl:ENST00000374656 Ensembl:ENST00000383212
Ensembl:ENST00000415941 Ensembl:ENST00000427374
Ensembl:ENST00000430233 Ensembl:ENST00000436128 GeneID:6015
KEGG:hsa:6015 UCSC:uc003odk.3 GeneCards:GC06P033177 HGNC:HGNC:10018
HPA:HPA008701 MIM:602045 neXtProt:NX_Q06587 PharmGKB:PA34393
InParanoid:Q06587 GenomeRNAi:6015 NextBio:23467 ArrayExpress:Q06587
Bgee:Q06587 CleanEx:HS_RING1 Genevestigator:Q06587
GermOnline:ENSG00000204227 Uniprot:Q06587
Length = 406
Score = 260 (96.6 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 52/123 (42%), Positives = 72/123 (58%)
Query: 103 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 162
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 163 NYDALISALYPDIDKYXXXXXXXXXX-XRTRNKQ-IQASIAKIFQRQS---EALVKRRTP 217
N+DALIS +YP ++Y R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPIP 161
Query: 218 GKD 220
G D
Sbjct: 162 GSD 164
>UNIPROTKB|A5D9P0 [details] [associations]
symbol:RING1 "Ring finger protein 1" species:9823 "Sus
scrofa" [GO:0048593 "camera-type eye morphogenesis" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0035102 "PRC1 complex" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001739 "sex chromatin" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0016604 GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907
GO:GO:0035518 GO:GO:0035102 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW OrthoDB:EOG4SXND4
EMBL:CT737383 EMBL:BX640585 RefSeq:NP_001177164.1 UniGene:Ssc.5967
ProteinModelPortal:A5D9P0 SMR:A5D9P0 STRING:A5D9P0
Ensembl:ENSSSCT00000001648 GeneID:100153162 KEGG:ssc:100153162
ArrayExpress:A5D9P0 Uniprot:A5D9P0
Length = 406
Score = 260 (96.6 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 52/123 (42%), Positives = 72/123 (58%)
Query: 103 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 162
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 163 NYDALISALYPDIDKYXXXXXXXXXX-XRTRNKQ-IQASIAKIFQRQS---EALVKRRTP 217
N+DALIS +YP ++Y R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 161
Query: 218 GKD 220
G D
Sbjct: 162 GSD 164
>RGD|3576 [details] [associations]
symbol:Ring1 "ring finger protein 1" species:10116 "Rattus
norvegicus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA;ISO]
[GO:0001739 "sex chromatin" evidence=IEA;ISO] [GO:0003682 "chromatin
binding" evidence=IEA;ISO] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0016574 "histone ubiquitination" evidence=ISO]
[GO:0016604 "nuclear body" evidence=ISO] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISO;ISS]
[GO:0035102 "PRC1 complex" evidence=ISO;ISS] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0048593 "camera-type eye morphogenesis" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Pfam:PF00097 RGD:3576 Prosite:PS00518 GO:GO:0005737 GO:GO:0045892
GO:GO:0009952 GO:GO:0046872 GO:GO:0016607 GO:GO:0008270 GO:GO:0006351
GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907 GO:GO:0035518
GO:GO:0035102 EMBL:BX883042 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917 HOVERGEN:HBG079942
KO:K10695 OMA:QSASKTW OrthoDB:EOG4SXND4 EMBL:BC098635 EMBL:X95474
IPI:IPI00417840 IPI:IPI00742451 RefSeq:NP_997714.2 UniGene:Rn.116589
ProteinModelPortal:Q6MGB6 SMR:Q6MGB6 STRING:Q6MGB6
Ensembl:ENSRNOT00000000543 GeneID:309626 KEGG:rno:309626
UCSC:RGD:3576 InParanoid:Q6MGB6 NextBio:661076 Genevestigator:Q6MGB6
GermOnline:ENSRNOG00000000467 Uniprot:Q6MGB6
Length = 406
Score = 260 (96.6 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 52/123 (42%), Positives = 72/123 (58%)
Query: 103 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 162
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 163 NYDALISALYPDIDKYXXXXXXXXXX-XRTRNKQ-IQASIAKIFQRQS---EALVKRRTP 217
N+DALIS +YP ++Y R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 161
Query: 218 GKD 220
G D
Sbjct: 162 GSD 164
>FB|FBgn0003330 [details] [associations]
symbol:Sce "Sex combs extra" species:7227 "Drosophila
melanogaster" [GO:0045498 "sex comb development" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IDA]
[GO:0006342 "chromatin silencing" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IMP]
[GO:0008278 "cohesin complex" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0030713 "ovarian follicle cell stalk
formation" evidence=IMP] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0035102 "PRC1
complex" evidence=TAS] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IMP] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 EMBL:AE014297
GO:GO:0007126 GO:GO:0005730 GO:GO:0022008 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006342 InterPro:IPR017907 GO:GO:0030713
GO:GO:0045498 GO:GO:0035518 GO:GO:0035102 GO:GO:0030708
GO:GO:0008278 GO:GO:0007062 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 KO:K10695 EMBL:AJ001514 EMBL:AY058535
RefSeq:NP_477509.1 UniGene:Dm.4170 ProteinModelPortal:Q9VB08
SMR:Q9VB08 DIP:DIP-21764N IntAct:Q9VB08 MINT:MINT-860974
STRING:Q9VB08 PaxDb:Q9VB08 PRIDE:Q9VB08 EnsemblMetazoa:FBtr0085245
GeneID:43327 KEGG:dme:Dmel_CG5595 CTD:43327 FlyBase:FBgn0003330
InParanoid:Q9VB08 OMA:MELYFAP OrthoDB:EOG489332 PhylomeDB:Q9VB08
GenomeRNAi:43327 NextBio:833362 Bgee:Q9VB08 GermOnline:CG5595
Uniprot:Q9VB08
Length = 435
Score = 251 (93.4 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 51/119 (42%), Positives = 73/119 (61%)
Query: 103 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 162
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 40 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRADP 99
Query: 163 NYDALISALYPDIDKYXXXXXXXXXXX-RTRNKQ-IQASIAKIFQRQSEALVKR-RTPG 218
N+D LIS +YP ++Y +T+++Q + SI + + QS+ +R RT G
Sbjct: 100 NFDLLISKIYPSREEYEAIQEKVMAKFNQTQSQQALVNSINEGIKLQSQNRPQRFRTKG 158
Score = 37 (18.1 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 443 PTTDQLQILEGQETL 457
P QL IL G +TL
Sbjct: 398 PQPQQLVILNGNQTL 412
>TAIR|locus:2825930 [details] [associations]
symbol:AT1G28327 "AT1G28327" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 IPI:IPI00534201 RefSeq:NP_174154.2
UniGene:At.51181 PRIDE:F4HWK6 EnsemblPlants:AT1G28327.1
GeneID:839728 KEGG:ath:AT1G28327 OMA:CEMYVAP Uniprot:F4HWK6
Length = 274
Score = 179 (68.1 bits), Expect = 8.8e-12, P = 8.8e-12
Identities = 52/168 (30%), Positives = 93/168 (55%)
Query: 310 EVGRESRGISPGLVWNPEMLAWGRGGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQ 369
E G E + L+ + L WG+ G RS R G+ + + L ++ +
Sbjct: 121 ESGTEEEFMETNLM-SLVSLQWGKRGKRS-MRKGT-----------WKRHILENHVGQHK 167
Query: 370 ENNDELDVRLMLVSADTQCAPSLQQPYLCCQPSLSVKQLCE-YVSLQTPLQAEEVEILMV 428
DE+D++++LVS D P+LQ P + C+P++++K LCE YV+ QAE++E+ +V
Sbjct: 168 NTQDEMDIQVLLVSMDASVIPNLQNPQVSCKPNVTLKSLCEMYVAPYVEAQAEKIEMYVV 227
Query: 429 KERLDAKGNQSTPI-PTTDQLQILEGQETLAGLRVNHTSNTDHLILAY 475
KE L A + T I P D+++I+ ++++ GLR+ + N ++I+ Y
Sbjct: 228 KE-LVA---ELTMIDPHRDRVEIVNKEDSVGGLRM-YNFNNGYVIIGY 270
>UNIPROTKB|F1LUN6 [details] [associations]
symbol:F1LUN6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
IPI:IPI00562660 Ensembl:ENSRNOT00000032989 Uniprot:F1LUN6
Length = 167
Score = 125 (49.1 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 29/91 (31%), Positives = 42/91 (46%)
Query: 90 GEKPEFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 149
G E + L E+ + C IC G + T+ ECLH FC+ CI K +N CP C
Sbjct: 39 GSDEEERLLPLSEMIPYISCSICKGYLIDAATITECLHTFCKSCIVKHFE-HSNRCPKCN 97
Query: 150 --THCAS-RRSLRDDPNYDALISALYPDIDK 177
H A +LR DP ++ L +++
Sbjct: 98 IIVHEAKPHNNLRMDPQLQNIVYKLVSGLEE 128
>UNIPROTKB|C9J3G7 [details] [associations]
symbol:PCGF3 "Polycomb group RING finger protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC139887 HOGENOM:HOG000231946
HGNC:HGNC:10066 ChiTaRS:PCGF3 EMBL:AC107464 IPI:IPI00878168
ProteinModelPortal:C9J3G7 SMR:C9J3G7 STRING:C9J3G7
Ensembl:ENST00000433814 ArrayExpress:C9J3G7 Bgee:C9J3G7
Uniprot:C9J3G7
Length = 109
Score = 124 (48.7 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 98 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 149
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>UNIPROTKB|C9JYD0 [details] [associations]
symbol:PCGF3 "Polycomb group RING finger protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC139887 HGNC:HGNC:10066 ChiTaRS:PCGF3
EMBL:AC107464 IPI:IPI00879042 ProteinModelPortal:C9JYD0 SMR:C9JYD0
STRING:C9JYD0 Ensembl:ENST00000427463 ArrayExpress:C9JYD0
Bgee:C9JYD0 Uniprot:C9JYD0
Length = 62
Score = 124 (48.7 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 98 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 149
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>UNIPROTKB|D6RAS2 [details] [associations]
symbol:TRIM60 "Tripartite motif-containing protein 60"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000234133 HGNC:HGNC:21162
EMBL:AC106872 IPI:IPI00967237 ProteinModelPortal:D6RAS2 SMR:D6RAS2
Ensembl:ENST00000507119 ArrayExpress:D6RAS2 Bgee:D6RAS2
Uniprot:D6RAS2
Length = 90
Score = 115 (45.5 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 27/71 (38%), Positives = 38/71 (53%)
Query: 94 EFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMR-LGNN-ECPACRTH 151
EFV L ++++ CPICL +K T+ C H FCR C+ S + L + CP CR
Sbjct: 2 EFV-TALVNLQEESSCPICLEYLKDPVTI-NCGHNFCRSCLSVSWKDLDDTFPCPVCR-F 58
Query: 152 CASRRSLRDDP 162
C +S R +P
Sbjct: 59 CFPYKSFRRNP 69
>UNIPROTKB|D4A0Y0 [details] [associations]
symbol:D4A0Y0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104499 EMBL:AC113720
IPI:IPI00359118 Ensembl:ENSRNOT00000030827 Uniprot:D4A0Y0
Length = 151
Score = 115 (45.5 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 29/69 (42%), Positives = 39/69 (56%)
Query: 100 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECID---KSMRL--GNNECPACRTHCAS 154
L I+++V CPICL ++K+ + +C H FCR CI +S R G CP CR C
Sbjct: 6 LEMIKEEVTCPICLELLKEPVST-DCNHSFCRACITINYESNRNTEGEGSCPVCRV-CYL 63
Query: 155 RRSLRDDPN 163
R+LR PN
Sbjct: 64 FRNLR--PN 70
>UNIPROTKB|Q495X7 [details] [associations]
symbol:TRIM60 "Tripartite motif-containing protein 60"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HSSP:Q9CQJ4 HOGENOM:HOG000234133
HOVERGEN:HBG001357 EMBL:AK093201 EMBL:BC100983 EMBL:BC100984
EMBL:BC100985 EMBL:BC100986 IPI:IPI00167899 RefSeq:NP_001244954.1
RefSeq:NP_689833.1 UniGene:Hs.368004 ProteinModelPortal:Q495X7
SMR:Q495X7 STRING:Q495X7 PhosphoSite:Q495X7 DMDM:114154820
PaxDb:Q495X7 PRIDE:Q495X7 Ensembl:ENST00000341062
Ensembl:ENST00000508504 Ensembl:ENST00000512596 GeneID:166655
KEGG:hsa:166655 UCSC:uc003iqy.1 CTD:166655 GeneCards:GC04P165953
HGNC:HGNC:21162 HPA:HPA035810 neXtProt:NX_Q495X7
PharmGKB:PA134909634 eggNOG:NOG253525 InParanoid:Q495X7 KO:K12029
OMA:VSWKDLD OrthoDB:EOG4NP73C PhylomeDB:Q495X7 GenomeRNAi:166655
NextBio:88609 ArrayExpress:Q495X7 Bgee:Q495X7 CleanEx:HS_TRIM60
Genevestigator:Q495X7 Uniprot:Q495X7
Length = 471
Score = 115 (45.5 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 27/71 (38%), Positives = 38/71 (53%)
Query: 94 EFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMR-LGNN-ECPACRTH 151
EFV L ++++ CPICL +K T+ C H FCR C+ S + L + CP CR
Sbjct: 2 EFV-TALVNLQEESSCPICLEYLKDPVTI-NCGHNFCRSCLSVSWKDLDDTFPCPVCR-F 58
Query: 152 CASRRSLRDDP 162
C +S R +P
Sbjct: 59 CFPYKSFRRNP 69
Score = 63 (27.2 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 26/86 (30%), Positives = 40/86 (46%)
Query: 351 KSSRSTRLNKLVEYLRSLQENNDELD-VRLMLVSADTQCAPSLQQPYLCCQPSLS--VKQ 407
+ S+S L K VEY R +E N E + +RL L + +Q + L+ + +
Sbjct: 165 QGSKSVELKKKVEYKR--EEINSEFEQIRLFLQNEQEMILRQIQDEEMNILAKLNENLVE 222
Query: 408 LCEYVSLQTPLQAEEVEILMVKERLD 433
L +YVS L EVE V+ L+
Sbjct: 223 LSDYVSTLKHL-LREVEGKSVQSNLE 247
>UNIPROTKB|F1PGG1 [details] [associations]
symbol:PCGF3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 EMBL:AAEX03002650
Ensembl:ENSCAFT00000026535 Uniprot:F1PGG1
Length = 286
Score = 130 (50.8 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 25/61 (40%), Positives = 35/61 (57%)
Query: 91 EKPEFVF--VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 148
EKP+ + ++L +I + C +C G + TV ECLH FCR C+ K + NN CP C
Sbjct: 41 EKPKMLTRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTC 99
Query: 149 R 149
R
Sbjct: 100 R 100
>UNIPROTKB|Q5T8Z4 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0007420
"brain development" evidence=IEA] [GO:0016573 "histone acetylation"
evidence=IEA] [GO:0016574 "histone ubiquitination" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0021903 "rostrocaudal
neural tube patterning" evidence=IEA] [GO:0030890 "positive
regulation of B cell proliferation" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=IEA] [GO:0033092 "positive regulation of
immature T cell proliferation in thymus" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048103 "somatic stem cell division" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0043066 GO:GO:0007420 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0001701 GO:GO:0016573 GO:GO:0003682
GO:GO:0000122 GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0006959 GO:GO:0048704 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0031519 HOGENOM:HOG000231945
HOVERGEN:HBG052826 GO:GO:0016574 GO:GO:0033092 GO:GO:0021903
GO:GO:0048103 EMBL:AL158211 UniGene:Hs.380403 UniGene:Hs.731287
HGNC:HGNC:1066 IPI:IPI00646013 SMR:Q5T8Z4 Ensembl:ENST00000442508
Uniprot:Q5T8Z4
Length = 150
Score = 111 (44.1 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 23/83 (27%), Positives = 38/83 (45%)
Query: 98 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 157
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 158 L---RDDPNYDALISALYPDIDK 177
L R D ++ L P + K
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFK 88
>UNIPROTKB|Q5T8Z6 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0007420
"brain development" evidence=IEA] [GO:0016573 "histone acetylation"
evidence=IEA] [GO:0016574 "histone ubiquitination" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0021903 "rostrocaudal
neural tube patterning" evidence=IEA] [GO:0030890 "positive
regulation of B cell proliferation" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=IEA] [GO:0033092 "positive regulation of
immature T cell proliferation in thymus" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048103 "somatic stem cell division" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0043066 GO:GO:0007420 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0001701 GO:GO:0016573 GO:GO:0003682
GO:GO:0000122 GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0006959 GO:GO:0048704 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0031519 GO:GO:0016574
GO:GO:0033092 GO:GO:0021903 GO:GO:0048103 EMBL:AL158211
UniGene:Hs.380403 UniGene:Hs.731287 HGNC:HGNC:1066
HOGENOM:HOG000231946 IPI:IPI00640733 SMR:Q5T8Z6 MINT:MINT-1403210
Ensembl:ENST00000416820 HOVERGEN:HBG071649 Uniprot:Q5T8Z6
Length = 105
Score = 111 (44.1 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 23/83 (27%), Positives = 38/83 (45%)
Query: 98 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 157
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 158 L---RDDPNYDALISALYPDIDK 177
L R D ++ L P + K
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFK 88
>UNIPROTKB|I3LAF0 [details] [associations]
symbol:PCGF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031519 "PcG protein complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519
GeneTree:ENSGT00550000074463 OMA:THLKKFI EMBL:FP102972
Ensembl:ENSSSCT00000030851 Uniprot:I3LAF0
Length = 203
Score = 124 (48.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 98 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 149
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>WB|WBGene00020496 [details] [associations]
symbol:spat-3 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0033522 "histone H2A ubiquitination"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0045138
"tail tip morphogenesis" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IGI] [GO:0030334
"regulation of cell migration" evidence=IMP] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GeneTree:ENSGT00700000104720 GO:GO:0000003
GO:GO:0030334 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0045138
GO:GO:0040027 InterPro:IPR017907 GO:GO:0033522 EMBL:FO080372
RefSeq:NP_001024904.2 UniGene:Cel.19810 PRIDE:H2KYH3
EnsemblMetazoa:T13H2.5a GeneID:259704 KEGG:cel:CELE_T13H2.5
CTD:259704 WormBase:T13H2.5a OMA:MNPARME Uniprot:H2KYH3
Length = 2476
Score = 138 (53.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 99 ELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSL 158
+L ++ C +C +I+ + +C HRFC +CI + N CP CR + S+R L
Sbjct: 152 DLQKVIGSFSCDVCQELIQGSIMTKKCGHRFCDQCILVAFMRSGNTCPTCRQNLGSKREL 211
Query: 159 RDDPNYDALI 168
+ DP +D LI
Sbjct: 212 QQDPRFDQLI 221
Score = 52 (23.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 21/87 (24%), Positives = 42/87 (48%)
Query: 384 ADTQCAPSLQQPYLCCQPSLSVKQLCEY-----VSLQTPLQAEEVEILMVKE----RLDA 434
A TQ +Q+ QP LS++Q+ + V +Q Q ++++ + +++ + A
Sbjct: 2090 AQTQAIVEIQRMIQSGQP-LSMQQMQQLQQMSQVQMQHAQQVQQMQQMQMQQLQMQQFAA 2148
Query: 435 KGNQSTPIPTTDQLQILEGQETLAGLR 461
+ Q TP P Q + +G AG++
Sbjct: 2149 RMQQGTPKPAVSQQAVQQGMP--AGIQ 2173
Score = 42 (19.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 400 QPSLSVKQLCEYVSLQTPLQAEE---VEILMVKERL--D-AKGNQSTPIPTTDQ 447
QP L + QL ++S T + A +++L D A+ QSTPI TT Q
Sbjct: 1771 QPPLPLHQLQGHMSAPTKITAVPNVAAGFHQNQQQLYSDMAQAPQSTPIRTTPQ 1824
>UNIPROTKB|Q5T8Z5 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL158211 UniGene:Hs.380403
UniGene:Hs.731287 HGNC:HGNC:1066 IPI:IPI00643353 SMR:Q5T8Z5
Ensembl:ENST00000456675 Uniprot:Q5T8Z5
Length = 92
Score = 109 (43.4 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 22/81 (27%), Positives = 37/81 (45%)
Query: 98 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 157
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 158 L---RDDPNYDALISALYPDI 175
L R D ++ L P +
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGL 86
>ZFIN|ZDB-GENE-080219-13 [details] [associations]
symbol:trim35-39 "tripartite motif containing 35-39"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-080219-13 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:BX005466 IPI:IPI00932638 Ensembl:ENSDART00000082154
OMA:ICEVISS Bgee:F1QQG3 Uniprot:F1QQG3
Length = 447
Score = 130 (50.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 27/68 (39%), Positives = 38/68 (55%)
Query: 105 KDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLG-NNECPACRTHCASRRSLRDDPN 163
K++ CPIC I K ++ C H FC+ECI + R + ECP CR RRS +DDP
Sbjct: 7 KEISCPICCEIFKSP-ILLSCSHSFCKECIQQFWRTKISRECPVCR-----RRSSKDDPP 60
Query: 164 YDALISAL 171
+ ++ L
Sbjct: 61 SNLVLKNL 68
>UNIPROTKB|Q07G17 [details] [associations]
symbol:pcgf3 "Polycomb group RING finger protein 3"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0031519 "PcG
protein complex" evidence=ISS] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 HOVERGEN:HBG052826
eggNOG:NOG277991 HOGENOM:HOG000231946 CTD:10336 KO:K11488
EMBL:CR855442 RefSeq:NP_001016847.1 UniGene:Str.21149
ProteinModelPortal:Q07G17 SMR:Q07G17 GeneID:549601 KEGG:xtr:549601
Xenbase:XB-GENE-987640 Uniprot:Q07G17
Length = 242
Score = 123 (48.4 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 98 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 149
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
Score = 37 (18.1 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 422 EVEILMVKERLDAKGNQST 440
+ EIL VK+ ++A N T
Sbjct: 109 KAEILTVKQHVEAHRNGET 127
>MGI|MGI:1916837 [details] [associations]
symbol:Pcgf3 "polycomb group ring finger 3" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 MGI:MGI:1916837
Pfam:PF00097 Prosite:PS00518 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 HSSP:P25916
GeneTree:ENSGT00550000074463 HOVERGEN:HBG052826 eggNOG:NOG277991
HOGENOM:HOG000231946 CTD:10336 KO:K11488 OMA:THLKKFI
OrthoDB:EOG49ZXPZ EMBL:AK033609 EMBL:AK089091 EMBL:BC049266
IPI:IPI00225141 IPI:IPI00471142 RefSeq:NP_766304.2
UniGene:Mm.261218 UniGene:Mm.486543 ProteinModelPortal:Q8BTQ0
SMR:Q8BTQ0 IntAct:Q8BTQ0 PhosphoSite:Q8BTQ0 PRIDE:Q8BTQ0
Ensembl:ENSMUST00000046975 Ensembl:ENSMUST00000112597 GeneID:69587
KEGG:mmu:69587 UCSC:uc008yod.1 UCSC:uc008yoe.1 InParanoid:Q8BTQ0
NextBio:329856 Bgee:Q8BTQ0 CleanEx:MM_PCGF3 Genevestigator:Q8BTQ0
Uniprot:Q8BTQ0
Length = 241
Score = 124 (48.7 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 98 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 149
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>UNIPROTKB|E1BAF7 [details] [associations]
symbol:E1BAF7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031519 "PcG protein complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519
GeneTree:ENSGT00550000074463 IPI:IPI00718391 OMA:THLKKFI
EMBL:DAAA02018518 EMBL:DAAA02018519 EMBL:DAAA02018520
EMBL:DAAA02018521 EMBL:DAAA02018522 Ensembl:ENSBTAT00000018621
Uniprot:E1BAF7
Length = 242
Score = 124 (48.7 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 98 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 149
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>UNIPROTKB|Q2KJ29 [details] [associations]
symbol:PCGF3 "Polycomb group RING finger protein 3"
species:9913 "Bos taurus" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519 HSSP:P25916
HOVERGEN:HBG052826 eggNOG:NOG277991 HOGENOM:HOG000231946
EMBL:BC105550 IPI:IPI00718391 RefSeq:NP_001040032.1
UniGene:Bt.13972 ProteinModelPortal:Q2KJ29 SMR:Q2KJ29 PRIDE:Q2KJ29
GeneID:615967 KEGG:bta:615967 CTD:10336 InParanoid:Q2KJ29 KO:K11488
NextBio:20899886 Uniprot:Q2KJ29
Length = 242
Score = 124 (48.7 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 98 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 149
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>UNIPROTKB|Q3KNV8 [details] [associations]
symbol:PCGF3 "Polycomb group RING finger protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 EMBL:CH471131 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 HSSP:P25916 HOVERGEN:HBG052826
eggNOG:NOG277991 CTD:10336 KO:K11488 EMBL:AJ001019 EMBL:BC107061
IPI:IPI00007279 IPI:IPI00827991 RefSeq:NP_006306.2
UniGene:Hs.144309 UniGene:Hs.731755 ProteinModelPortal:Q3KNV8
SMR:Q3KNV8 IntAct:Q3KNV8 STRING:Q3KNV8 PhosphoSite:Q3KNV8
DMDM:121942537 PRIDE:Q3KNV8 Ensembl:ENST00000362003
Ensembl:ENST00000470161 Ensembl:ENST00000505655 GeneID:10336
KEGG:hsa:10336 UCSC:uc003gbe.3 GeneCards:GC04P000691
HGNC:HGNC:10066 HPA:HPA018487 neXtProt:NX_Q3KNV8 PharmGKB:PA34433
InParanoid:Q3KNV8 OMA:THLKKFI OrthoDB:EOG49ZXPZ ChiTaRS:PCGF3
GenomeRNAi:10336 NextBio:39203 ArrayExpress:Q3KNV8 Bgee:Q3KNV8
CleanEx:HS_PCGF3 Genevestigator:Q3KNV8 Uniprot:Q3KNV8
Length = 242
Score = 124 (48.7 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 98 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 149
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>ZFIN|ZDB-GENE-110920-8 [details] [associations]
symbol:trim35-20 "tripartite motif containing 35-20"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-110920-8 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:BX005105 IPI:IPI00931157 RefSeq:NP_001038474.1
ProteinModelPortal:F2Z4W9 Ensembl:ENSDART00000036273 GeneID:563088
KEGG:dre:563088 CTD:563088 OMA:REQITHE Uniprot:F2Z4W9
Length = 453
Score = 129 (50.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 106 DVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN-ECPACRTHCASRRSLRDDP 162
D CP+C I K T ++ C H FC+EC+ + ++ N ECP CR RRS ++DP
Sbjct: 8 DYSCPVCQDIFK-TPVILSCSHSFCKECLQQFWKIKNTQECPVCR-----RRSSKEDP 59
>UNIPROTKB|F1N8I5 [details] [associations]
symbol:BRCA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006281 "DNA repair" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR011364 PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089
SMART:SM00184 InterPro:IPR001357 Pfam:PF00097 Pfam:PF00533
Prosite:PS00518 GO:GO:0005737 GO:GO:0046872 GO:GO:0003684
GO:GO:0006260 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000794 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 InterPro:IPR017907 PANTHER:PTHR13763
InterPro:IPR025994 Pfam:PF12820 GeneTree:ENSGT00440000034289
GO:GO:0009048 GO:GO:0007098 EMBL:AADN02068671 IPI:IPI00587753
Ensembl:ENSGALT00000004392 Ensembl:ENSGALT00000039722 OMA:INASHEN
Uniprot:F1N8I5
Length = 1749
Score = 131 (51.2 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 27/82 (32%), Positives = 49/82 (59%)
Query: 100 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM---RLGNNECPACRTHCASRR 156
L ++K+++CP+CL +IK+ + +C H FCR C+ K + + G +CP C+T ++R
Sbjct: 15 LSAMQKNLECPVCLDVIKEPVST-KCDHVFCRFCMFKLLSRKKKGVIQCPLCKTE-VTKR 72
Query: 157 SLRDDPNYDALISALYPDIDKY 178
SL+++ + LI L I +
Sbjct: 73 SLKENSRFKQLIEGLLEAISAF 94
Score = 52 (23.4 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 36/137 (26%), Positives = 49/137 (35%)
Query: 337 RSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPSLQQPY 396
RSN S + + T LN + E S + N E A+ L Q +
Sbjct: 1019 RSNRSQSDQSNTEEHAFQRTGLNAVSETYFSSESNQVE--------KAEVVDDKGLMQHF 1070
Query: 397 LCCQPSLSVKQLCEYVSLQTPLQ--AEEVEI-LMVKERLDAKGNQSTPIPTTDQ-LQILE 452
QPS LC Q P + E E ++ +ER KGN+ I T L
Sbjct: 1071 ---QPS---PMLCPTACQQNPAEFNCELTEKKIITRERSLVKGNEERVIQTVSTGLSEFS 1124
Query: 453 GQETLAGLRVNHTSNTD 469
+E L H+ TD
Sbjct: 1125 VREALEESLKGHSDFTD 1141
Score = 42 (19.8 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 29/127 (22%), Positives = 51/127 (40%)
Query: 319 SPGLVWNPEMLAWGRGGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDV- 377
SP V++ ++L R G G+AS + +S ++ N ELD+
Sbjct: 274 SPLNVFDADLLTGQRDGI------GNASPLKNDTSFLKNAEEMDVEETQCSHKNQELDLE 327
Query: 378 -----RLMLVSADTQCAPSLQQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKERL 432
RL + C PS++ +C +P + L + ++ PLQ + + E
Sbjct: 328 DSSEGRLDKIKEKDICVPSVEDVEMC-EP-MDDSLLEKEPPVEKPLQPKIPHCPTLNEVS 385
Query: 433 DAKGNQS 439
+ NQS
Sbjct: 386 TKRLNQS 392
>UNIPROTKB|J9P325 [details] [associations]
symbol:PCGF3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 OMA:THLKKFI EMBL:AAEX03002650
Ensembl:ENSCAFT00000044431 Uniprot:J9P325
Length = 269
Score = 124 (48.7 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 98 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 149
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>UNIPROTKB|F1NLA3 [details] [associations]
symbol:PCGF3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031519
"PcG protein complex" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519
GeneTree:ENSGT00550000074463 OMA:THLKKFI EMBL:AADN02065914
IPI:IPI00588017 Ensembl:ENSGALT00000024747 Uniprot:F1NLA3
Length = 245
Score = 123 (48.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 98 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 149
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 9 IKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 59
>RGD|1562871 [details] [associations]
symbol:RGD1562871 "similar to BMI1-like protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 RGD:1562871 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00550000074463 EMBL:CH473969
IPI:IPI00361980 RefSeq:NP_001100405.1 UniGene:Rn.218687
Ensembl:ENSRNOT00000050807 GeneID:302366 KEGG:rno:302366
UCSC:RGD:1562871 CTD:302366 OrthoDB:EOG4XSKRX NextBio:649488
Uniprot:D4AE11
Length = 232
Score = 122 (48.0 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 27/81 (33%), Positives = 39/81 (48%)
Query: 100 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR--THCAS-RR 156
L E+ + C IC G + T+ ECLH FC+ CI K +N CP C H A
Sbjct: 114 LSEMIPYISCSICKGYLIDAATITECLHTFCKSCIVKHFE-HSNRCPKCNIIVHEAKPHN 172
Query: 157 SLRDDPNYDALISALYPDIDK 177
+LR DP ++ L +++
Sbjct: 173 NLRMDPQLQNIVYKLVSGLEE 193
>UNIPROTKB|I3LDC6 [details] [associations]
symbol:LOC100524364 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00690000101886 EMBL:FP236415
Ensembl:ENSSSCT00000025760 Uniprot:I3LDC6
Length = 140
Score = 105 (42.0 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 107 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN-ECPACRT 150
++CP+CL + T V+ C H FCR C+ + + CP CRT
Sbjct: 10 LECPVCLEKLDVTAKVLPCQHTFCRPCLQRIFKAHKELRCPECRT 54
>UNIPROTKB|J3KSI2 [details] [associations]
symbol:RNF138 "E3 ubiquitin-protein ligase RNF138"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HGNC:HGNC:17765 EMBL:AC011825 Ensembl:ENST00000578107
Uniprot:J3KSI2
Length = 108
Score = 104 (41.7 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 106 DVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 155
D CP+C ++K C H FCR+C +MR CP CR + R
Sbjct: 15 DFYCPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGAHCPLCRGNVTRR 64
>UNIPROTKB|J3QKM8 [details] [associations]
symbol:RNF138 "E3 ubiquitin-protein ligase RNF138"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HGNC:HGNC:17765 EMBL:AC011825 Ensembl:ENST00000580499
Uniprot:J3QKM8
Length = 142
Score = 104 (41.7 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 106 DVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 155
D CP+C ++K C H FCR+C +MR CP CR + R
Sbjct: 15 DFYCPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGAHCPLCRGNVTRR 64
>UNIPROTKB|B3KRH1 [details] [associations]
symbol:RNF2 "Ring finger protein 2, isoform CRA_a"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 EMBL:CH471067 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL109865 HOGENOM:HOG000273917
HOVERGEN:HBG079942 UniGene:Hs.591490 HGNC:HGNC:10061 EMBL:AK091574
IPI:IPI00514074 SMR:B3KRH1 STRING:B3KRH1 Ensembl:ENST00000367509
UCSC:uc001grd.1 Uniprot:B3KRH1
Length = 264
Score = 122 (48.0 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 96 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLG 141
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R G
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSG 83
>TAIR|locus:2133109 [details] [associations]
symbol:BRCA1 "breast cancer susceptibility1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA;IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010332 "response
to gamma radiation" evidence=IEP;RCA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0006310 "DNA
recombination" evidence=IMP] [GO:0006302 "double-strand break
repair" evidence=RCA] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 Prosite:PS00518 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL080282 EMBL:AL161554 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 GO:GO:0010332
GO:GO:0006310 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
KO:K10683 HSSP:P28990 EMBL:AY081328 EMBL:AF515728 EMBL:BT010547
IPI:IPI00526043 RefSeq:NP_193839.4 UniGene:At.32665
ProteinModelPortal:Q8RXD4 SMR:Q8RXD4 MINT:MINT-3289893
STRING:Q8RXD4 PaxDb:Q8RXD4 PRIDE:Q8RXD4 EnsemblPlants:AT4G21070.1
GeneID:827854 KEGG:ath:AT4G21070 TAIR:At4g21070 eggNOG:NOG274496
HOGENOM:HOG000084100 InParanoid:Q8RXD4 OMA:EWAPNVY PhylomeDB:Q8RXD4
ProtClustDB:CLSN2681611 Genevestigator:Q8RXD4 PANTHER:PTHR13763
Uniprot:Q8RXD4
Length = 941
Score = 129 (50.5 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 26/77 (33%), Positives = 46/77 (59%)
Query: 100 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 159
L + ++++CPICL + + + C H FC CI KSM++ + CP C+ RR +R
Sbjct: 7 LERMGRELKCPICLSLYNSAVS-LSCNHVFCNACIVKSMKM-DATCPVCKIPY-HRREIR 63
Query: 160 DDPNYDALISALYPDID 176
P+ D+L+S +Y +++
Sbjct: 64 GAPHMDSLVS-IYKNME 79
>ZFIN|ZDB-GENE-081030-23 [details] [associations]
symbol:trim35-34 "tripartite motif containing 35-34"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-081030-23 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 eggNOG:NOG285726 OrthoDB:EOG4QNMW8
GeneTree:ENSGT00680000099496 HOVERGEN:HBG106887 EMBL:CU539057
IPI:IPI00900847 RefSeq:NP_001137520.1 UniGene:Dr.154012
Ensembl:ENSDART00000036283 GeneID:566050 KEGG:dre:566050
OMA:WALARIT NextBio:20887999 Uniprot:B8JLS7
Length = 452
Score = 125 (49.1 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 25/60 (41%), Positives = 33/60 (55%)
Query: 104 RKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN-ECPACRTHCASRRSLRDDP 162
+ D CP+C I K T ++ C H FC+EC+ + R N ECP CRT R S+ D P
Sbjct: 6 KDDYTCPVCQDIFK-TPVILSCGHSFCQECLQQCWRSENTQECPVCRT----RSSIADPP 60
>ZFIN|ZDB-GENE-061009-3 [details] [associations]
symbol:trim35-31 "tripartite motif containing 35-31"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-061009-3 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:FP016234 IPI:IPI00627838 Ensembl:ENSDART00000057464
Bgee:F1Q8S8 Uniprot:F1Q8S8
Length = 455
Score = 125 (49.1 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 28/68 (41%), Positives = 37/68 (54%)
Query: 105 KDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGN-NECPACRTHCASRRSLRDDPN 163
++ CPIC I K V+ C H FCREC+ + R + ECP CR RRS RDDP
Sbjct: 7 ENFSCPICHEIFKDP-VVLSCSHSFCRECLQQYWRAVDIQECPVCR-----RRSSRDDPP 60
Query: 164 YDALISAL 171
+ ++ L
Sbjct: 61 NNLVLKNL 68
>UNIPROTKB|J3KT13 [details] [associations]
symbol:PCGF2 "Polycomb group ring finger 2, isoform CRA_a"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
EMBL:CH471152 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC006449 InterPro:IPR017907 UniGene:Hs.713595
UniGene:Hs.371617 HGNC:HGNC:12929 ProteinModelPortal:J3KT13
Ensembl:ENST00000579882 Ensembl:ENST00000585100 Uniprot:J3KT13
Length = 257
Score = 120 (47.3 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 24/83 (28%), Positives = 39/83 (46%)
Query: 98 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 156
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 157 --SLRDDPNYDALISALYPDIDK 177
S+R D ++ L P + K
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFK 88
>ZFIN|ZDB-GENE-040801-199 [details] [associations]
symbol:trim35-36 "tripartite motif containing
35-36" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-040801-199 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 eggNOG:NOG285726 HOGENOM:HOG000124586
OrthoDB:EOG4QNMW8 GeneTree:ENSGT00680000099496 HOVERGEN:HBG106887
EMBL:CU137686 EMBL:BC077164 IPI:IPI00511023 RefSeq:NP_001003462.1
UniGene:Dr.73072 Ensembl:ENSDART00000031534 GeneID:445068
KEGG:dre:445068 CTD:445068 InParanoid:Q6DEF5 OMA:WIVELKE
NextBio:20831830 Uniprot:Q6DEF5
Length = 450
Score = 124 (48.7 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 106 DVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN-ECPACRTHCASRRSLRDDP 162
D+ CP+C I K T ++ C H FC+EC+ + R N ECP CR RRS +D P
Sbjct: 8 DLTCPVCQDIFK-TPVILSCSHSFCKECLQQFWRNKNTQECPVCR-----RRSSKDRP 59
>UNIPROTKB|C9JWN8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC015691 EMBL:AC025016
EMBL:AC131574 HOGENOM:HOG000234134 HGNC:HGNC:16276 ChiTaRS:TRIM5
EMBL:AC109341 IPI:IPI00749246 ProteinModelPortal:C9JWN8 SMR:C9JWN8
STRING:C9JWN8 Ensembl:ENST00000419850 ArrayExpress:C9JWN8
Bgee:C9JWN8 Uniprot:C9JWN8
Length = 72
Score = 101 (40.6 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 100 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECID----KSMR-LGNNECPACR 149
L ++++V CPICL ++ + + ++C H FC+ C+ KSM G + CP CR
Sbjct: 6 LVNVKEEVTCPICLELLTQPLS-LDCGHSFCQACLTANHKKSMLDKGESSCPVCR 59
>ZFIN|ZDB-GENE-071004-80 [details] [associations]
symbol:zgc:171260 "zgc:171260" species:7955 "Danio
rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-071004-80
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
eggNOG:NOG285726 HOGENOM:HOG000124586 OrthoDB:EOG4QNMW8
EMBL:BC152517 IPI:IPI00998622 RefSeq:NP_001103307.1
UniGene:Dr.152815 ProteinModelPortal:A7MD79 GeneID:100126109
KEGG:dre:100126109 HOVERGEN:HBG106887 NextBio:20788971
Uniprot:A7MD79
Length = 452
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 106 DVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN-ECPACRTHCASRRSLRDDP 162
D+ CP+C I K T ++ C H FC+EC+ + R N ECP CR RRS +D P
Sbjct: 8 DLTCPVCQDIFK-TPVLLSCSHSFCKECLQQFWRSKNTQECPVCR-----RRSSKDYP 59
>UNIPROTKB|E7EQW4 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 PANTHER:PTHR13763 EMBL:AC060780 EMBL:AC135721
HGNC:HGNC:1100 ChiTaRS:BRCA1 IPI:IPI00947541
ProteinModelPortal:E7EQW4 SMR:E7EQW4 Ensembl:ENST00000476777
ArrayExpress:E7EQW4 Bgee:E7EQW4 Uniprot:E7EQW4
Length = 222
Score = 116 (45.9 bits), Expect = 0.00015, P = 0.00015
Identities = 23/71 (32%), Positives = 44/71 (61%)
Query: 103 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDK--SMRLGNNECPACRTHCASRRSLRD 160
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 161 DPNYDALISAL 171
+ L+ L
Sbjct: 76 STRFSQLVEEL 86
>MGI|MGI:99161 [details] [associations]
symbol:Pcgf2 "polycomb group ring finger 2" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO;IGI] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0001701 "in utero embryonic
development" evidence=IGI] [GO:0001739 "sex chromatin"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI;IMP]
[GO:0016573 "histone acetylation" evidence=IGI] [GO:0016604
"nuclear body" evidence=IDA] [GO:0031519 "PcG protein complex"
evidence=ISO;IDA] [GO:0035102 "PRC1 complex" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
[GO:0048706 "embryonic skeletal system development" evidence=IGI]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
MGI:MGI:99161 Pfam:PF00097 Prosite:PS00518 GO:GO:0043066
GO:GO:0009952 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0001701 GO:GO:0016573 GO:GO:0006351 GO:GO:0003682
GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0048704
GO:GO:0016604 InterPro:IPR017907 eggNOG:NOG304672
GeneTree:ENSGT00550000074463 HOGENOM:HOG000231945
HOVERGEN:HBG052826 OrthoDB:EOG4KSPKG GO:GO:0035102 GO:GO:0001739
CTD:7703 KO:K11460 OMA:DRDEKKG EMBL:D90085 EMBL:AF483502
EMBL:AF483503 EMBL:BC016419 IPI:IPI00316639 PIR:A37991
RefSeq:NP_001156779.1 RefSeq:NP_001156780.1 RefSeq:NP_033571.1
UniGene:Mm.2418 ProteinModelPortal:P23798 SMR:P23798 DIP:DIP-37645N
IntAct:P23798 MINT:MINT-1172293 STRING:P23798 PhosphoSite:P23798
PRIDE:P23798 Ensembl:ENSMUST00000018681 Ensembl:ENSMUST00000103148
Ensembl:ENSMUST00000169807 Ensembl:ENSMUST00000179765 GeneID:22658
KEGG:mmu:22658 InParanoid:P23798 ChiTaRS:PCGF2 NextBio:303067
Bgee:P23798 CleanEx:MM_PCGF2 Genevestigator:P23798
GermOnline:ENSMUSG00000018537 Uniprot:P23798
Length = 342
Score = 120 (47.3 bits), Expect = 0.00015, P = 0.00015
Identities = 24/83 (28%), Positives = 39/83 (46%)
Query: 98 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 156
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 157 --SLRDDPNYDALISALYPDIDK 177
S+R D ++ L P + K
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFK 88
>RGD|1305097 [details] [associations]
symbol:Pcgf2 "polycomb group ring finger 2" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0001701 "in utero
embryonic development" evidence=IEA;ISO] [GO:0001739 "sex
chromatin" evidence=IEA;ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA;ISO] [GO:0016573 "histone
acetylation" evidence=IEA;ISO] [GO:0016604 "nuclear body"
evidence=IEA;ISO] [GO:0031519 "PcG protein complex" evidence=ISO]
[GO:0035102 "PRC1 complex" evidence=IEA;ISO] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA;ISO] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA;ISO]
[GO:0048706 "embryonic skeletal system development" evidence=ISO]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 RGD:1305097 Prosite:PS00518 GO:GO:0043066
GO:GO:0009952 GO:GO:0046872 GO:GO:0008270 GO:GO:0001701
GO:GO:0016573 GO:GO:0003682 GO:GO:0016567 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0048704
EMBL:CH473948 GO:GO:0016604 InterPro:IPR017907 eggNOG:NOG304672
GeneTree:ENSGT00550000074463 HOGENOM:HOG000231945
HOVERGEN:HBG052826 OrthoDB:EOG4KSPKG GO:GO:0035102 GO:GO:0001739
CTD:7703 KO:K11460 EMBL:BC167059 IPI:IPI00191064
RefSeq:NP_001099306.1 UniGene:Rn.11826 SMR:B2RZ82 STRING:B2RZ82
Ensembl:ENSRNOT00000017241 GeneID:287662 KEGG:rno:287662
UCSC:RGD:1305097 NextBio:626761 Genevestigator:B2RZ82
Uniprot:B2RZ82
Length = 342
Score = 120 (47.3 bits), Expect = 0.00015, P = 0.00015
Identities = 24/83 (28%), Positives = 39/83 (46%)
Query: 98 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 156
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 157 --SLRDDPNYDALISALYPDIDK 177
S+R D ++ L P + K
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFK 88
>UNIPROTKB|E1BMR4 [details] [associations]
symbol:PCGF2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0035102 "PRC1 complex" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0043066
GO:GO:0009952 GO:GO:0046872 GO:GO:0008270 GO:GO:0001701
GO:GO:0016573 GO:GO:0003682 GO:GO:0016567 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0048704
GO:GO:0016604 InterPro:IPR017907 GeneTree:ENSGT00550000074463
GO:GO:0035102 GO:GO:0001739 CTD:7703 KO:K11460 OMA:DRDEKKG
UniGene:Bt.62403 EMBL:DAAA02049098 IPI:IPI00698887
RefSeq:NP_001137578.1 ProteinModelPortal:E1BMR4
Ensembl:ENSBTAT00000015331 GeneID:505147 KEGG:bta:505147
NextBio:20867002 Uniprot:E1BMR4
Length = 344
Score = 120 (47.3 bits), Expect = 0.00015, P = 0.00015
Identities = 24/83 (28%), Positives = 39/83 (46%)
Query: 98 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 156
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 157 --SLRDDPNYDALISALYPDIDK 177
S+R D ++ L P + K
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFK 88
>UNIPROTKB|J9NUE7 [details] [associations]
symbol:PCGF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 EMBL:AAEX03006484 EMBL:AAEX03006485
Ensembl:ENSCAFT00000048828 Uniprot:J9NUE7
Length = 344
Score = 120 (47.3 bits), Expect = 0.00015, P = 0.00015
Identities = 24/83 (28%), Positives = 39/83 (46%)
Query: 98 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 156
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 157 --SLRDDPNYDALISALYPDIDK 177
S+R D ++ L P + K
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFK 88
>UNIPROTKB|P35227 [details] [associations]
symbol:PCGF2 "Polycomb group RING finger protein 2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001739 "sex chromatin"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0031519
"PcG protein complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0035102 "PRC1 complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0043066 GO:GO:0009952 GO:GO:0046872 GO:GO:0003677
EMBL:CH471152 GO:GO:0008270 GO:GO:0001701 GO:GO:0016573
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 GO:GO:0016567
GO:GO:0000122 GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC006449 GO:GO:0004842 GO:GO:0048704 GO:GO:0016604
InterPro:IPR017907 eggNOG:NOG304672 HOGENOM:HOG000231945
HOVERGEN:HBG052826 OrthoDB:EOG4KSPKG GO:GO:0035102
UniGene:Hs.713595 GO:GO:0001739 EMBL:D13969 EMBL:BX647429
EMBL:BC004858 EMBL:BC024255 IPI:IPI00017302 PIR:JN0717
RefSeq:NP_009075.1 UniGene:Hs.371617 ProteinModelPortal:P35227
SMR:P35227 DIP:DIP-41880N IntAct:P35227 MINT:MINT-158325
STRING:P35227 PhosphoSite:P35227 DMDM:462585 PRIDE:P35227
DNASU:7703 Ensembl:ENST00000360797 Ensembl:ENST00000580830
Ensembl:ENST00000581345 GeneID:7703 KEGG:hsa:7703 UCSC:uc002hqp.1
CTD:7703 GeneCards:GC17M036890 HGNC:HGNC:12929 HPA:HPA047732
MIM:600346 neXtProt:NX_P35227 PharmGKB:PA37516 InParanoid:P35227
KO:K11460 OMA:DRDEKKG GenomeRNAi:7703 NextBio:29858 Bgee:P35227
CleanEx:HS_PCGF2 Genevestigator:P35227 GermOnline:ENSG00000056661
Uniprot:P35227
Length = 344
Score = 120 (47.3 bits), Expect = 0.00015, P = 0.00015
Identities = 24/83 (28%), Positives = 39/83 (46%)
Query: 98 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 156
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 157 --SLRDDPNYDALISALYPDIDK 177
S+R D ++ L P + K
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFK 88
>UNIPROTKB|E2QY05 [details] [associations]
symbol:PCGF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 OMA:DRDEKKG EMBL:AAEX03006484
EMBL:AAEX03006485 Ensembl:ENSCAFT00000026210 Uniprot:E2QY05
Length = 348
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 24/83 (28%), Positives = 39/83 (46%)
Query: 98 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 156
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 157 --SLRDDPNYDALISALYPDIDK 177
S+R D ++ L P + K
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFK 88
>UNIPROTKB|H0Y340 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL359265 EMBL:AL162736
EMBL:AL513329 EMBL:AL590723 HGNC:HGNC:17440 ChiTaRS:RFWD2
Ensembl:ENST00000367667 Uniprot:H0Y340
Length = 113
Score = 99 (39.9 bits), Expect = 0.00016, P = 0.00016
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 106 DVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 148
D CPIC +I++ + +C H FC +CI +S+ NN CP C
Sbjct: 38 DFVCPICFDMIEEAY-MTKCGHSFCYKCIHQSLE-DNNRCPKC 78
>ZFIN|ZDB-GENE-080723-33 [details] [associations]
symbol:pcgf5a "polycomb group ring finger 5a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
ZFIN:ZDB-GENE-080723-33 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 GeneTree:ENSGT00550000074463
HOVERGEN:HBG052826 eggNOG:NOG277991 EMBL:BC163687 EMBL:BC163702
IPI:IPI00858490 RefSeq:NP_001122184.1 UniGene:Dr.134043
ProteinModelPortal:B3DK16 STRING:B3DK16 Ensembl:ENSDART00000104715
GeneID:562327 KEGG:dre:562327 CTD:562327 HOGENOM:HOG000231946
KO:K11489 OMA:EESNECP OrthoDB:EOG4NKBW6 NextBio:20884351
Bgee:B3DK16 Uniprot:B3DK16
Length = 234
Score = 116 (45.9 bits), Expect = 0.00018, P = 0.00017
Identities = 26/77 (33%), Positives = 38/77 (49%)
Query: 102 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC--RTHCASR-RSL 158
+ + + C IC G + K V ECLH FC+ CI + +NECP C + H + L
Sbjct: 11 DFNRYITCSICRGYLIKPTAVTECLHTFCKSCIVQHFE-ESNECPECGIQVHETNPLEML 69
Query: 159 RDDPNYDALISALYPDI 175
R D + +I L P +
Sbjct: 70 RLDKTLEEIIFKLVPGL 86
>ZFIN|ZDB-GENE-041114-35 [details] [associations]
symbol:trim35-29 "tripartite motif containing 35-29"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-041114-35 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:BX548254 IPI:IPI00971926 Ensembl:ENSDART00000086141
ArrayExpress:F1Q6X2 Bgee:F1Q6X2 Uniprot:F1Q6X2
Length = 450
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 27/64 (42%), Positives = 34/64 (53%)
Query: 109 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN-ECPACRTHCASRRSLRDDPNYDAL 167
CP+C I K V+ C H FC+EC+ K N ECP CR RRS RDDP + +
Sbjct: 15 CPVCCKIYKDP-VVLSCSHSFCQECLQKFWITCNTLECPVCR-----RRSSRDDPPCNLV 68
Query: 168 ISAL 171
+ L
Sbjct: 69 LKNL 72
>TAIR|locus:2055435 [details] [associations]
symbol:AT2G34000 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AC002341
EMBL:DQ059092 EMBL:BT029341 IPI:IPI00544559 PIR:B84751
RefSeq:NP_180947.1 UniGene:At.53025 ProteinModelPortal:O22953
SMR:O22953 PRIDE:O22953 EnsemblPlants:AT2G34000.1 GeneID:817961
KEGG:ath:AT2G34000 TAIR:At2g34000 eggNOG:NOG251402
HOGENOM:HOG000114083 InParanoid:O22953 OMA:WLESHAT PhylomeDB:O22953
ProtClustDB:CLSN2913116 Genevestigator:O22953 Uniprot:O22953
Length = 151
Score = 106 (42.4 bits), Expect = 0.00020, P = 0.00020
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 101 PEIR-KDVQCPICLGIIKKT---RTVMECLHRFCRECIDKSMRLGNNECPACR 149
PE ++++CP+CLG+I K + + C+H F ECI K + + CP CR
Sbjct: 82 PESNNQEIECPVCLGLIPKNVVIKVLPNCMHMFDEECIGKWLE-SHATCPVCR 133
>MGI|MGI:2685640 [details] [associations]
symbol:Trim75 "tripartite motif-containing 75" species:10090
"Mus musculus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 MGI:MGI:2685640 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HSSP:Q9CQJ4 HOGENOM:HOG000234133 HOVERGEN:HBG001357
GeneTree:ENSGT00700000104307 OrthoDB:EOG4NP73C eggNOG:NOG254111
EMBL:AK136018 IPI:IPI00339960 RefSeq:NP_001028601.1
UniGene:Mm.334557 ProteinModelPortal:Q3UWZ0 SMR:Q3UWZ0 PRIDE:Q3UWZ0
Ensembl:ENSMUST00000095295 GeneID:333307 KEGG:mmu:333307 CTD:391714
InParanoid:Q3UWZ0 KO:K12037 OMA:NILVETI NextBio:399957 Bgee:Q3UWZ0
Genevestigator:Q3UWZ0 Uniprot:Q3UWZ0
Length = 467
Score = 121 (47.7 bits), Expect = 0.00020, P = 0.00020
Identities = 28/72 (38%), Positives = 37/72 (51%)
Query: 100 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGN---NECPACRTHCASRR 156
L ++K+ +CPICL + TV EC H FCR CI K G + CP CR C R
Sbjct: 7 LARLQKETKCPICLDDLTDPVTV-ECGHNFCRSCI-KDFWAGQQATSSCPVCRHQC-QHR 63
Query: 157 SLRDDPNYDALI 168
+LR + +I
Sbjct: 64 NLRSNAQLGNMI 75
>UNIPROTKB|Q95153 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein
homolog" species:9615 "Canis lupus familiaris" [GO:0005694
"chromosome" evidence=ISS] [GO:0085020 "protein K6-linked
ubiquitination" evidence=ISS] [GO:0051865 "protein
autoubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0031436 "BRCA1-BARD1 complex"
evidence=ISS] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=ISS] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006633 "fatty acid biosynthetic process"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518 GO:GO:0005694
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006281
GO:GO:0006633 GO:GO:0007049 GO:GO:0045717 GO:GO:0006310
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907 GO:GO:0051865
GO:GO:0031436 GO:GO:0085020 eggNOG:NOG274496 PANTHER:PTHR13763
CTD:672 HOGENOM:HOG000230969 HOVERGEN:HBG050730 KO:K10605
OrthoDB:EOG42RD7C InterPro:IPR025994 Pfam:PF12820 EMBL:U50709
RefSeq:NP_001013434.1 UniGene:Cfa.140 ProteinModelPortal:Q95153
SMR:Q95153 STRING:Q95153 GeneID:403437 KEGG:cfa:403437
InParanoid:Q95153 NextBio:20816955 Uniprot:Q95153
Length = 1878
Score = 124 (48.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 28/85 (32%), Positives = 50/85 (58%)
Query: 89 SGEKPEFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDK--SMRLGNNECP 146
S ++ E V L ++K ++CPICL +IK+ + +C H FC+ C+ K + R G ++CP
Sbjct: 4 SADRVEEVQNVLNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQRKGPSQCP 62
Query: 147 ACRTHCASRRSLRDDPNYDALISAL 171
C+ ++RSL++ + L+ L
Sbjct: 63 LCKNDI-TKRSLQESTRFSQLVEEL 86
Score = 52 (23.4 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 28/118 (23%), Positives = 50/118 (42%)
Query: 345 ASGCNSKSSRS---TRLNKLVEYLRSLQENN--DELDVRLMLVSADTQCAPSLQQPYLC- 398
ASG S++S S +RL+ + L + Q + D L ++L A+ + +
Sbjct: 1373 ASGYESETSLSEDCSRLSSQSDILTTQQRDTMQDNL-IKLQQEMAELEAVLEQHESQPSN 1431
Query: 399 CQPSLSVKQLCEYVSLQTPLQAEEVEILMVKERLDAKGNQSTPIPTTDQLQILEGQET 456
PSL + C L P Q +L ++ D+ +Q+ +TD+ Q+ T
Sbjct: 1432 SSPSL-IADSCSPEDLLNPEQNASERVLTSEKSSDSPISQNPESLSTDKFQVFLDSST 1488
>TAIR|locus:2094608 [details] [associations]
symbol:AT3G23060 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
eggNOG:NOG304672 EMBL:AB026655 KO:K16277 EMBL:AY099845
EMBL:BT006623 IPI:IPI00546320 RefSeq:NP_188946.2 UniGene:At.37773
UniGene:At.67676 ProteinModelPortal:Q9LS86 SMR:Q9LS86 IntAct:Q9LS86
PRIDE:Q9LS86 EnsemblPlants:AT3G23060.1 GeneID:821880
KEGG:ath:AT3G23060 TAIR:At3g23060 HOGENOM:HOG000153088
InParanoid:Q9LS86 OMA:NKFINER PhylomeDB:Q9LS86
ProtClustDB:CLSN2917950 Genevestigator:Q9LS86 Uniprot:Q9LS86
Length = 480
Score = 122 (48.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 26/74 (35%), Positives = 35/74 (47%)
Query: 102 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECI-DKSMRLGNNECPACRTHCA--SRRSL 158
E++ + CPIC K T+ ECLH FCR CI +K + N CP C + L
Sbjct: 9 EVKPCLACPICTNPFKDATTISECLHTFCRSCIRNKFINERVNACPVCNVNLGVFPLEKL 68
Query: 159 RDDPNYDALISALY 172
R D + L +Y
Sbjct: 69 RSDCTWQDLKLKIY 82
Score = 40 (19.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 15/65 (23%), Positives = 30/65 (46%)
Query: 305 IENDLEVGRESRGISPGLVWNPEMLAWGRGGTRSNTRHGSASGCNSKSSRSTRLNKLVEY 364
I+N V RE++ + + N +++ R ++ + +G + SR + K VE
Sbjct: 263 IQNKCVVNRETKEVPVQVNQNSLLISSDRDREDNSGQKLKTNGAATSRSRKKKGKKPVEK 322
Query: 365 LRSLQ 369
SL+
Sbjct: 323 SYSLR 327
>UNIPROTKB|J9P2L6 [details] [associations]
symbol:PCGF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 EMBL:AAEX03015404 EMBL:AAEX03015405
EMBL:AAEX03015406 Ensembl:ENSCAFT00000045871 Uniprot:J9P2L6
Length = 229
Score = 114 (45.2 bits), Expect = 0.00028, P = 0.00028
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 107 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC--RTHCASR-RSLRDDPN 163
+ C IC G + K TV ECLH FC+ CI + +N+CP C + H + LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGIQVHETNPLEMLRLDNT 74
Query: 164 YDALISALYPDI 175
+ +I L P +
Sbjct: 75 LEEIIFKLVPGL 86
>ZFIN|ZDB-GENE-060503-673 [details] [associations]
symbol:trim35-21 "tripartite motif containing
35-21" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-060503-673 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 eggNOG:NOG285726
HOGENOM:HOG000124586 OrthoDB:EOG4QNMW8 GeneTree:ENSGT00680000099496
HOVERGEN:HBG106887 EMBL:AL954363 IPI:IPI00619654
RefSeq:NP_001038429.1 UniGene:Dr.95926 Ensembl:ENSDART00000074102
GeneID:561579 KEGG:dre:561579 InParanoid:Q1MT06 OMA:NEKCSSA
NextBio:20883995 Uniprot:Q1MT06
Length = 451
Score = 121 (47.7 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 105 KDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN-ECPACRTHCASRRSLRDDPN 163
+D+ CP+C I K V+ C H FC+EC+ + R ECP CR+ S RDDP
Sbjct: 9 EDLSCPVCCEIFKNP-VVLSCSHSFCKECLQQFWRTKKTQECPVCRS------SSRDDPP 61
Query: 164 YDALISAL 171
+ ++ L
Sbjct: 62 NNLILKNL 69
Score = 39 (18.8 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 22/111 (19%), Positives = 48/111 (43%)
Query: 349 NSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVS--ADTQCAPSLQQPYLCCQPSLSVK 406
+SK +T L L L+ +++ DE + L + AD ++ + L +
Sbjct: 131 SSKEELNTALKSLQYKLKHMEQVKDEFEKTLQHIKNQAD-HTERQIKHDFERLHQFLRDE 189
Query: 407 QLCEYVSLQTPLQAEEVEILMVKERLDAKGNQSTPIPTT--DQLQILEGQE 455
+ +L+ + EE + M+KE+L+ + + T D ++L+ +
Sbjct: 190 EEATITALR---EEEEQKKQMMKEKLEEMNTHISALSHTIKDTEEMLKAND 237
>UNIPROTKB|Q4QR06 [details] [associations]
symbol:pcgf1 "Polycomb group RING finger protein 1"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519 HSSP:P25916
HOVERGEN:HBG052826 CTD:84759 KO:K11487 EMBL:BC097736
RefSeq:NP_001089498.2 UniGene:Xl.19589 ProteinModelPortal:Q4QR06
GeneID:734550 KEGG:xla:734550 Xenbase:XB-GENE-6255892
Uniprot:Q4QR06
Length = 259
Score = 113 (44.8 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 94 EFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 148
E V V++ E+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 30 EVVKVKIKELNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQT-SKYCPLC 83
Score = 39 (18.8 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 392 LQQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILM 427
LQQ Y+ C ++ L +S + +V++L+
Sbjct: 187 LQQKYVRCSVRSEIRHLRRVLSHRLSAPLAQVQLLI 222
>RGD|1583513 [details] [associations]
symbol:Pcgf5 "polycomb group ring finger 5" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005813
"centrosome" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISO]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 RGD:1583513 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00550000074463 EMBL:AC127789
IPI:IPI00763179 Ensembl:ENSRNOT00000025020 UCSC:RGD:1583513
ArrayExpress:E9PTD5 Uniprot:E9PTD5
Length = 236
Score = 114 (45.2 bits), Expect = 0.00031, P = 0.00031
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 107 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC--RTHCASR-RSLRDDPN 163
+ C IC G + K TV ECLH FC+ CI + +N+CP C + H + LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 164 YDALISALYPDI 175
+ +I L P +
Sbjct: 75 LEEIIFKLVPGL 86
>UNIPROTKB|H0YAI5 [details] [associations]
symbol:RNF4 "E3 ubiquitin-protein ligase RNF4" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL110117 EMBL:AL645924
EMBL:BX322586 EMBL:CR450722 EMBL:CR545473 HGNC:HGNC:10067
ChiTaRS:RNF4 Ensembl:ENST00000508235 Uniprot:H0YAI5
Length = 106
Score = 96 (38.9 bits), Expect = 0.00034, P = 0.00034
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 107 VQCPICLG----IIKKTRTVM--ECLHRFCRECIDKSMRLGNNECPACRTHCASRRSL 158
V CPIC+ I++ R ++ EC H FC +C+ S++ N CP CR +R L
Sbjct: 46 VSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANT-CPTCRKKINHKRLL 102
>MGI|MGI:2664992 [details] [associations]
symbol:Trim50 "tripartite motif-containing 50" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016235 "aggresome" evidence=IDA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0070201 "regulation of establishment of protein localization"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 MGI:MGI:2664992
Prosite:PS00518 GO:GO:0005737 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234133 GeneTree:ENSGT00680000099496 CTD:135892
eggNOG:NOG245385 HOVERGEN:HBG106596 KO:K12024 EMBL:AY081947
IPI:IPI00408393 RefSeq:NP_839971.1 UniGene:Mm.261834
ProteinModelPortal:Q810I2 SMR:Q810I2 STRING:Q810I2
PhosphoSite:Q810I2 PRIDE:Q810I2 Ensembl:ENSMUST00000065785
GeneID:215061 KEGG:mmu:215061 UCSC:uc008zyf.1 NextBio:374596
CleanEx:MM_TRIM50 Genevestigator:Q810I2 Uniprot:Q810I2
Length = 483
Score = 119 (46.9 bits), Expect = 0.00035, P = 0.00035
Identities = 21/59 (35%), Positives = 38/59 (64%)
Query: 100 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE--CPACR--THCAS 154
+PE++ +QCPICL + K+ +++C H +C++C+D + ++E CP CR C+S
Sbjct: 7 VPELQDQLQCPICLEVFKEP-LMLQCGHSYCKDCLDNLSQHLDSELCCPVCRQSVDCSS 64
>UNIPROTKB|F1PTU1 [details] [associations]
symbol:PCGF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031519 "PcG protein complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0005813 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519
GeneTree:ENSGT00550000074463 EMBL:AAEX03015404 EMBL:AAEX03015405
EMBL:AAEX03015406 Ensembl:ENSCAFT00000011620 Uniprot:F1PTU1
Length = 252
Score = 114 (45.2 bits), Expect = 0.00037, P = 0.00037
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 107 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC--RTHCASR-RSLRDDPN 163
+ C IC G + K TV ECLH FC+ CI + +N+CP C + H + LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGIQVHETNPLEMLRLDNT 74
Query: 164 YDALISALYPDI 175
+ +I L P +
Sbjct: 75 LEEIIFKLVPGL 86
>UNIPROTKB|A0JN86 [details] [associations]
symbol:PCGF5 "Polycomb group RING finger protein 5"
species:9913 "Bos taurus" [GO:0031519 "PcG protein complex"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 GeneTree:ENSGT00550000074463
HOVERGEN:HBG052826 eggNOG:NOG277991 HOGENOM:HOG000231946 KO:K11489
OrthoDB:EOG4NKBW6 OMA:FYQSYPM EMBL:BC126565 IPI:IPI00698156
RefSeq:NP_001071448.1 UniGene:Bt.59906 ProteinModelPortal:A0JN86
SMR:A0JN86 PRIDE:A0JN86 Ensembl:ENSBTAT00000006533 GeneID:528946
KEGG:bta:528946 CTD:84333 InParanoid:A0JN86
BioCyc:CATTLE:528946-MONOMER NextBio:20874930 Uniprot:A0JN86
Length = 255
Score = 114 (45.2 bits), Expect = 0.00038, P = 0.00038
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 107 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC--RTHCASR-RSLRDDPN 163
+ C IC G + K TV ECLH FC+ CI + +N+CP C + H + LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 164 YDALISALYPDI 175
+ +I L P +
Sbjct: 75 LEEIIFKLVPGL 86
>UNIPROTKB|E1BYN8 [details] [associations]
symbol:PCGF5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005813
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 GeneTree:ENSGT00550000074463
KO:K11489 OMA:FYQSYPM CTD:84333 EMBL:AADN02027727 IPI:IPI00603520
RefSeq:XP_421668.1 UniGene:Gga.14951 ProteinModelPortal:E1BYN8
Ensembl:ENSGALT00000010507 GeneID:423796 KEGG:gga:423796
NextBio:20826216 Uniprot:E1BYN8
Length = 256
Score = 114 (45.2 bits), Expect = 0.00038, P = 0.00038
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 107 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC--RTHCASR-RSLRDDPN 163
+ C IC G + K TV ECLH FC+ CI + +N+CP C + H + LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 164 YDALISALYPDI 175
+ +I L P +
Sbjct: 75 LEEIIFKLVPGL 86
>UNIPROTKB|F1PTT1 [details] [associations]
symbol:PCGF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 KO:K11489 OMA:FYQSYPM CTD:84333
EMBL:AAEX03015404 EMBL:AAEX03015405 EMBL:AAEX03015406
RefSeq:XP_543923.2 ProteinModelPortal:F1PTT1
Ensembl:ENSCAFT00000011621 GeneID:486794 KEGG:cfa:486794
Uniprot:F1PTT1
Length = 256
Score = 114 (45.2 bits), Expect = 0.00038, P = 0.00038
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 107 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC--RTHCASR-RSLRDDPN 163
+ C IC G + K TV ECLH FC+ CI + +N+CP C + H + LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGIQVHETNPLEMLRLDNT 74
Query: 164 YDALISALYPDI 175
+ +I L P +
Sbjct: 75 LEEIIFKLVPGL 86
>UNIPROTKB|Q86SE9 [details] [associations]
symbol:PCGF5 "Polycomb group RING finger protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005813
GO:GO:0006355 GO:GO:0046872 EMBL:CH471066 GO:GO:0008270
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 HSSP:P25916 HOVERGEN:HBG052826
eggNOG:NOG277991 HOGENOM:HOG000231946 KO:K11489 OrthoDB:EOG4NKBW6
OMA:FYQSYPM CTD:84333 EMBL:AK303014 EMBL:AL832003 EMBL:AL832496
EMBL:BC007377 EMBL:BC051845 IPI:IPI00328390 IPI:IPI00449145
RefSeq:NP_001243478.1 RefSeq:NP_001244030.1 RefSeq:NP_115749.2
UniGene:Hs.500512 ProteinModelPortal:Q86SE9 SMR:Q86SE9
IntAct:Q86SE9 STRING:Q86SE9 PhosphoSite:Q86SE9 DMDM:74750353
PRIDE:Q86SE9 DNASU:84333 Ensembl:ENST00000336126
Ensembl:ENST00000371687 Ensembl:ENST00000543648 GeneID:84333
KEGG:hsa:84333 UCSC:uc001khh.3 GeneCards:GC10P092979
HGNC:HGNC:28264 HPA:HPA038349 neXtProt:NX_Q86SE9
PharmGKB:PA134929149 InParanoid:Q86SE9 PhylomeDB:Q86SE9
ChiTaRS:PCGF5 GenomeRNAi:84333 NextBio:74097 Bgee:Q86SE9
CleanEx:HS_PCGF5 Genevestigator:Q86SE9 Uniprot:Q86SE9
Length = 256
Score = 114 (45.2 bits), Expect = 0.00038, P = 0.00038
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 107 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC--RTHCASR-RSLRDDPN 163
+ C IC G + K TV ECLH FC+ CI + +N+CP C + H + LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 164 YDALISALYPDI 175
+ +I L P +
Sbjct: 75 LEEIIFKLVPGL 86
>MGI|MGI:1923505 [details] [associations]
symbol:Pcgf5 "polycomb group ring finger 5" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 MGI:MGI:1923505
Pfam:PF00097 Prosite:PS00518 GO:GO:0005813 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519 HSSP:P25916
GeneTree:ENSGT00550000074463 HOVERGEN:HBG052826 eggNOG:NOG277991
HOGENOM:HOG000231946 KO:K11489 OrthoDB:EOG4NKBW6 OMA:FYQSYPM
CTD:84333 EMBL:AK002387 EMBL:AK017984 EMBL:AK146133 EMBL:BC139258
EMBL:BC139259 EMBL:BC145590 IPI:IPI00135919 IPI:IPI00653832
RefSeq:NP_083784.1 UniGene:Mm.259180 UniGene:Mm.381165
UniGene:Mm.488093 UniGene:Mm.490414 ProteinModelPortal:Q3UK78
SMR:Q3UK78 IntAct:Q3UK78 PhosphoSite:Q3UK78 PRIDE:Q3UK78
Ensembl:ENSMUST00000062389 Ensembl:ENSMUST00000071267 GeneID:76073
KEGG:mmu:76073 UCSC:uc008hhi.1 UCSC:uc008hhk.1 InParanoid:Q3UK78
NextBio:344549 Bgee:Q3UK78 CleanEx:MM_PCGF5 Genevestigator:Q3UK78
Uniprot:Q3UK78
Length = 256
Score = 114 (45.2 bits), Expect = 0.00038, P = 0.00038
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 107 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC--RTHCASR-RSLRDDPN 163
+ C IC G + K TV ECLH FC+ CI + +N+CP C + H + LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 164 YDALISALYPDI 175
+ +I L P +
Sbjct: 75 LEEIIFKLVPGL 86
>RGD|1307403 [details] [associations]
symbol:Bmi1 "Bmi1 polycomb ring finger oncogene" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000151 "ubiquitin ligase complex" evidence=ISO] [GO:0001501
"skeletal system development" evidence=ISO] [GO:0001701 "in utero
embryonic development" evidence=ISO] [GO:0003682 "chromatin
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0006959 "humoral immune
response" evidence=ISO] [GO:0007420 "brain development"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA;ISO]
[GO:0010468 "regulation of gene expression" evidence=ISO]
[GO:0016573 "histone acetylation" evidence=ISO] [GO:0016574
"histone ubiquitination" evidence=ISO] [GO:0016604 "nuclear body"
evidence=ISO] [GO:0021903 "rostrocaudal neural tube patterning"
evidence=ISO] [GO:0030097 "hemopoiesis" evidence=ISO] [GO:0030890
"positive regulation of B cell proliferation" evidence=ISO]
[GO:0031519 "PcG protein complex" evidence=ISO] [GO:0033092
"positive regulation of immature T cell proliferation in thymus"
evidence=ISO] [GO:0035102 "PRC1 complex" evidence=ISO] [GO:0043066
"negative regulation of apoptotic process" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO]
[GO:0048103 "somatic stem cell division" evidence=ISO] [GO:0048146
"positive regulation of fibroblast proliferation" evidence=ISO]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
[GO:0048706 "embryonic skeletal system development" evidence=ISO]
[GO:0051443 "positive regulation of ubiquitin-protein ligase
activity" evidence=ISO] [GO:0071535 "RING-like zinc finger domain
binding" evidence=ISO] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 RGD:1307403 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 IPI:IPI00870411 Ensembl:ENSRNOT00000022315
UCSC:RGD:1307403 Uniprot:D3ZLC8
Length = 200
Score = 111 (44.1 bits), Expect = 0.00040, P = 0.00040
Identities = 23/83 (27%), Positives = 38/83 (45%)
Query: 98 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 157
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 158 L---RDDPNYDALISALYPDIDK 177
L R D ++ L P + K
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFK 88
>ZFIN|ZDB-GENE-081030-6 [details] [associations]
symbol:trim35-38 "tripartite motif containing 35-38"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-081030-6 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:CU137686 IPI:IPI00859170 Ensembl:ENSDART00000036309
Uniprot:E7F326
Length = 450
Score = 118 (46.6 bits), Expect = 0.00041, P = 0.00041
Identities = 24/58 (41%), Positives = 33/58 (56%)
Query: 106 DVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN-ECPACRTHCASRRSLRDDP 162
D CP+C I K T ++ C H FC+EC+ + R N ECP CR RRS +++P
Sbjct: 8 DYICPVCQEIFK-TPVILSCSHSFCKECLQQFWRNKNTQECPVCR-----RRSSKENP 59
>ZFIN|ZDB-GENE-080213-8 [details] [associations]
symbol:zgc:172170 "zgc:172170" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-080213-8 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HOVERGEN:HBG106887 EMBL:BC154568
IPI:IPI00882698 RefSeq:NP_001108175.1 UniGene:Dr.154576
ProteinModelPortal:A8WG40 GeneID:100137106 KEGG:dre:100137106
NextBio:20789400 Uniprot:A8WG40
Length = 453
Score = 118 (46.6 bits), Expect = 0.00041, P = 0.00041
Identities = 24/58 (41%), Positives = 33/58 (56%)
Query: 106 DVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN-ECPACRTHCASRRSLRDDP 162
D+ CP+C I K T ++ C H FC+EC+ + R N ECP CR R+S +D P
Sbjct: 8 DLICPVCHEIFK-TPVILSCSHSFCQECLQQFWRSKNTRECPVCR-----RKSSKDHP 59
>UNIPROTKB|C9JNB9 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC024221 HGNC:HGNC:30834
IPI:IPI00946347 ProteinModelPortal:C9JNB9 SMR:C9JNB9 STRING:C9JNB9
Ensembl:ENST00000468542 ArrayExpress:C9JNB9 Bgee:C9JNB9
Uniprot:C9JNB9
Length = 68
Score = 95 (38.5 bits), Expect = 0.00044, P = 0.00044
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 98 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN-----------ECP 146
+E+ +++ CPIC I + R V+ C H FCR C++ ++ N +CP
Sbjct: 6 LEMHNFEEELTCPICYSIFEDPR-VLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCP 64
Query: 147 ACRT 150
CR+
Sbjct: 65 NCRS 68
>UNIPROTKB|Q5T8Z1 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0007420
"brain development" evidence=IEA] [GO:0016573 "histone acetylation"
evidence=IEA] [GO:0016574 "histone ubiquitination" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0021903 "rostrocaudal
neural tube patterning" evidence=IEA] [GO:0030890 "positive
regulation of B cell proliferation" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=IEA] [GO:0033092 "positive regulation of
immature T cell proliferation in thymus" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048103 "somatic stem cell division" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0043066 GO:GO:0007420 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0001701 GO:GO:0016573 GO:GO:0003682
GO:GO:0000122 GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0006959 GO:GO:0048704 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0031519 HOGENOM:HOG000231945
HOVERGEN:HBG052826 OrthoDB:EOG4KSPKG GO:GO:0016574 GO:GO:0033092
GO:GO:0021903 GO:GO:0048103 EMBL:AL158211 UniGene:Hs.380403
UniGene:Hs.731287 HGNC:HGNC:1066 IPI:IPI00643590 SMR:Q5T8Z1
IntAct:Q5T8Z1 Ensembl:ENST00000417470 Uniprot:Q5T8Z1
Length = 207
Score = 111 (44.1 bits), Expect = 0.00045, P = 0.00045
Identities = 23/83 (27%), Positives = 38/83 (45%)
Query: 98 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 157
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 158 L---RDDPNYDALISALYPDIDK 177
L R D ++ L P + K
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFK 88
>RGD|631346 [details] [associations]
symbol:Trim50 "tripartite motif-containing 50" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016235 "aggresome" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0070201 "regulation of establishment of protein localization"
evidence=ISO] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 RGD:631346
Prosite:PS00518 GO:GO:0043231 GO:GO:0005737 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
CTD:135892 eggNOG:NOG245385 HOVERGEN:HBG106596 KO:K12024
OrthoDB:EOG4RNB87 EMBL:AY081950 IPI:IPI00389366 RefSeq:NP_851594.1
UniGene:Rn.43040 ProteinModelPortal:Q810I1 PRIDE:Q810I1
GeneID:288596 KEGG:rno:288596 UCSC:RGD:631346 InParanoid:Q810I1
NextBio:628389 Genevestigator:Q810I1 Uniprot:Q810I1
Length = 483
Score = 118 (46.6 bits), Expect = 0.00045, P = 0.00045
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 100 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDK-SMRLGNN-ECPACR--THCAS 154
+PE++ +QCPICL + K+ +++C H +C+ C+D S L + CP CR C+S
Sbjct: 7 VPELQDQLQCPICLEVFKEP-LMLQCGHSYCKNCLDSLSEHLDSELRCPVCRQSVDCSS 64
>UNIPROTKB|Q810I1 [details] [associations]
symbol:Trim50 "E3 ubiquitin-protein ligase TRIM50"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 RGD:631346
Prosite:PS00518 GO:GO:0043231 GO:GO:0005737 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
CTD:135892 eggNOG:NOG245385 HOVERGEN:HBG106596 KO:K12024
OrthoDB:EOG4RNB87 EMBL:AY081950 IPI:IPI00389366 RefSeq:NP_851594.1
UniGene:Rn.43040 ProteinModelPortal:Q810I1 PRIDE:Q810I1
GeneID:288596 KEGG:rno:288596 UCSC:RGD:631346 InParanoid:Q810I1
NextBio:628389 Genevestigator:Q810I1 Uniprot:Q810I1
Length = 483
Score = 118 (46.6 bits), Expect = 0.00045, P = 0.00045
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 100 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDK-SMRLGNN-ECPACR--THCAS 154
+PE++ +QCPICL + K+ +++C H +C+ C+D S L + CP CR C+S
Sbjct: 7 VPELQDQLQCPICLEVFKEP-LMLQCGHSYCKNCLDSLSEHLDSELRCPVCRQSVDCSS 64
>FB|FBgn0037384 [details] [associations]
symbol:dgrn "degringolade" species:7227 "Drosophila
melanogaster" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0032183 "SUMO binding" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0033768 "SUMO-targeted ubiquitin ligase
complex" evidence=IC] [GO:0070201 "regulation of establishment of
protein localization" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0043393 "regulation of protein binding" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007530 "sex
determination" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IGI]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:AE014297 GO:GO:0005737 GO:GO:0045893
GO:GO:0022008 GO:GO:0046872 GO:GO:0008270 GO:GO:0043393
GO:GO:0009790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 HSSP:P38398 GO:GO:0007530 GO:GO:0070201
GO:GO:0033768 GeneTree:ENSGT00390000010318 UniGene:Dm.1077
GeneID:40725 KEGG:dme:Dmel_CG10981 CTD:40725 FlyBase:FBgn0037384
GenomeRNAi:40725 NextBio:820277 EMBL:AY060824 RefSeq:NP_649596.1
SMR:Q9VNJ0 IntAct:Q9VNJ0 MINT:MINT-766055 STRING:Q9VNJ0
EnsemblMetazoa:FBtr0078638 UCSC:CG10981-RA InParanoid:Q9VNJ0
OMA:IRATHKC Uniprot:Q9VNJ0
Length = 319
Score = 115 (45.5 bits), Expect = 0.00048, P = 0.00048
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 93 PEFVFVELPEIRKD--VQCPICLGIIKKTRTVM-ECLHRFCRECIDKSMRLGNNECPACR 149
P+ V ++ E +K+ +CPIC+ + K V +C H FCRECI+ ++R ++CP C
Sbjct: 248 PKRVNRDIDESQKEELYKCPICMDSVSKREPVSTKCGHVFCRECIETAIR-ATHKCPICN 306
Query: 150 THCASRRSLR 159
+R+ R
Sbjct: 307 KKLTARQFFR 316
>ZFIN|ZDB-GENE-060512-34 [details] [associations]
symbol:pcgf5b "polycomb group ring finger 5b"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 ZFIN:ZDB-GENE-060512-34 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 GeneTree:ENSGT00550000074463
HOVERGEN:HBG052826 eggNOG:NOG277991 KO:K11489 OrthoDB:EOG4NKBW6
EMBL:BC116619 IPI:IPI00630550 RefSeq:NP_001038700.1
UniGene:Dr.78700 ProteinModelPortal:Q1JPS1 SMR:Q1JPS1 STRING:Q1JPS1
Ensembl:ENSDART00000086211 GeneID:692252 KEGG:dre:692252 CTD:692252
InParanoid:Q1JPS1 OMA:FYQSYPM NextBio:20902468 Bgee:Q1JPS1
Uniprot:Q1JPS1
Length = 232
Score = 112 (44.5 bits), Expect = 0.00050, P = 0.00050
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 107 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC--RTHCASR-RSLRDDPN 163
+ C +C G + K TV ECLH FC+ CI + +N+CP C + H + LR D
Sbjct: 16 ITCFVCKGYLIKPTTVTECLHTFCKSCIVQHFE-DSNDCPKCGIQVHETNPLEMLRLDNT 74
Query: 164 YDALISALYPDI 175
+ +I L P +
Sbjct: 75 LEEVIFKLVPGL 86
>UNIPROTKB|Q28H21 [details] [associations]
symbol:pcgf1 "Polycomb group RING finger protein 1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0031519 "PcG
protein complex" evidence=ISS] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 HSSP:P25916 HOVERGEN:HBG052826
CTD:84759 KO:K11487 EMBL:CR761098 RefSeq:NP_001016417.2
UniGene:Str.20413 ProteinModelPortal:Q28H21 SMR:Q28H21
GeneID:549171 KEGG:xtr:549171 Xenbase:XB-GENE-6454077
Uniprot:Q28H21
Length = 259
Score = 113 (44.8 bits), Expect = 0.00051, P = 0.00051
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 94 EFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 148
E V V++ E+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 30 EVVKVKIKELNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQT-SKYCPLC 83
>WB|WBGene00000264 [details] [associations]
symbol:brc-1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0045132 "meiotic
chromosome segregation" evidence=IMP] [GO:0008219 "cell death"
evidence=IMP] [GO:0033554 "cellular response to stress"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0006281 "DNA repair" evidence=IMP] [GO:0051307
"meiotic chromosome separation" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IMP] [GO:0031436
"BRCA1-BARD1 complex" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IDA]
[GO:0006289 "nucleotide-excision repair" evidence=IGI;IMP]
InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089 SMART:SM00184
InterPro:IPR001357 Prosite:PS00518 GO:GO:0006915 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000724 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 InterPro:IPR017907 GO:GO:0006289 GO:GO:0031436
GO:GO:0051307 eggNOG:NOG274496 PANTHER:PTHR13763 EMBL:Z66495
RefSeq:NP_001254881.1 ProteinModelPortal:B6VQ60 SMR:B6VQ60
IntAct:B6VQ60 STRING:B6VQ60 PaxDb:B6VQ60 EnsemblMetazoa:C36A4.8a
GeneID:175499 KEGG:cel:CELE_C36A4.8 CTD:175499 WormBase:C36A4.8a
GeneTree:ENSGT00530000068746 HOGENOM:HOG000199539 OMA:LDKRSCR
ArrayExpress:B6VQ60 Uniprot:B6VQ60
Length = 612
Score = 98 (39.6 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 103 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM-RLGNNECPACRTHCASRRSLRD 160
++K+++C IC K + C H FCR CI+ R +CP CR+ +RS RD
Sbjct: 15 LQKELKCGICCSTYKDP-ILSTCFHIFCRSCINACFERKRKVQCPICRS-VLDKRSCRD 71
Score = 65 (27.9 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 30/122 (24%), Positives = 50/122 (40%)
Query: 351 KSSRSTRLN-KLVEYLRSLQENN---DELDVRLMLVSADTQCAPS----LQQPYLCCQPS 402
K SR N + EY+ +L+EN+ DE+D L+ Q + L + + P
Sbjct: 196 KISREELKNVDIEEYINTLRENSTEIDEIDALFQLMPTMRQFLRNNINQLMEKFHVAPPK 255
Query: 403 LSVKQLCEYVSLQTPLQAEEVEILMVKERLDAKGNQSTPIPTTDQL-QILEGQETLAGLR 461
S K VS + E ++I+ E L+ PI Q ++ + + L L
Sbjct: 256 KSEKPANRRVSFASSQDLENIKIMTASESLETPPE---PIQKLAQKPEVFKSTQNLIDLN 312
Query: 462 VN 463
+N
Sbjct: 313 LN 314
>UNIPROTKB|B6VQ60 [details] [associations]
symbol:brc-1 "Protein BRC-1, isoform a" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089
SMART:SM00184 InterPro:IPR001357 Prosite:PS00518 GO:GO:0006915
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000724 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907 GO:GO:0006289
GO:GO:0031436 GO:GO:0051307 eggNOG:NOG274496 PANTHER:PTHR13763
EMBL:Z66495 RefSeq:NP_001254881.1 ProteinModelPortal:B6VQ60
SMR:B6VQ60 IntAct:B6VQ60 STRING:B6VQ60 PaxDb:B6VQ60
EnsemblMetazoa:C36A4.8a GeneID:175499 KEGG:cel:CELE_C36A4.8
CTD:175499 WormBase:C36A4.8a GeneTree:ENSGT00530000068746
HOGENOM:HOG000199539 OMA:LDKRSCR ArrayExpress:B6VQ60 Uniprot:B6VQ60
Length = 612
Score = 98 (39.6 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 103 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM-RLGNNECPACRTHCASRRSLRD 160
++K+++C IC K + C H FCR CI+ R +CP CR+ +RS RD
Sbjct: 15 LQKELKCGICCSTYKDP-ILSTCFHIFCRSCINACFERKRKVQCPICRS-VLDKRSCRD 71
Score = 65 (27.9 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 30/122 (24%), Positives = 50/122 (40%)
Query: 351 KSSRSTRLN-KLVEYLRSLQENN---DELDVRLMLVSADTQCAPS----LQQPYLCCQPS 402
K SR N + EY+ +L+EN+ DE+D L+ Q + L + + P
Sbjct: 196 KISREELKNVDIEEYINTLRENSTEIDEIDALFQLMPTMRQFLRNNINQLMEKFHVAPPK 255
Query: 403 LSVKQLCEYVSLQTPLQAEEVEILMVKERLDAKGNQSTPIPTTDQL-QILEGQETLAGLR 461
S K VS + E ++I+ E L+ PI Q ++ + + L L
Sbjct: 256 KSEKPANRRVSFASSQDLENIKIMTASESLETPPE---PIQKLAQKPEVFKSTQNLIDLN 312
Query: 462 VN 463
+N
Sbjct: 313 LN 314
>UNIPROTKB|I3LDV4 [details] [associations]
symbol:I3LDV4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035518 "histone H2A monoubiquitination" evidence=IEA]
[GO:0031519 "PcG protein complex" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00550000074463
Ensembl:ENSSSCT00000029600 OMA:ISECSHT Uniprot:I3LDV4
Length = 269
Score = 113 (44.8 bits), Expect = 0.00056, P = 0.00056
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 89 SGEKPEFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 148
SGE E V V++ ++ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 31 SGE--EEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPMC 87
>UNIPROTKB|D6RAL3 [details] [associations]
symbol:SH3RF1 "E3 ubiquitin-protein ligase SH3RF1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005078 "MAP-kinase scaffold activity"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0046328 "regulation
of JNK cascade" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0006917 GO:GO:0046872
GO:GO:0008270 GO:GO:0030027 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0046328 InterPro:IPR017907 EMBL:AC021151 HGNC:HGNC:17650
ChiTaRS:SH3RF1 EMBL:AC096741 EMBL:AC104783 IPI:IPI00967311
ProteinModelPortal:D6RAL3 SMR:D6RAL3 Ensembl:ENST00000510806
ArrayExpress:D6RAL3 Bgee:D6RAL3 Uniprot:D6RAL3
Length = 79
Score = 94 (38.1 bits), Expect = 0.00057, P = 0.00057
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 107 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN-ECPACRT 150
++CP+CL + + V+ C H FC+ C+ + N CP CRT
Sbjct: 10 LECPVCLERLDASAKVLPCQHTFCKRCLLGIVGSRNELRCPECRT 54
>UNIPROTKB|D6RHX5 [details] [associations]
symbol:SH3RF1 "E3 ubiquitin-protein ligase SH3RF1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005078 "MAP-kinase scaffold activity"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0046328 "regulation
of JNK cascade" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0006917 GO:GO:0046872
GO:GO:0008270 GO:GO:0030027 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0046328 InterPro:IPR017907 EMBL:AC021151 HGNC:HGNC:17650
ChiTaRS:SH3RF1 EMBL:AC096741 EMBL:AC104783 IPI:IPI00966916
ProteinModelPortal:D6RHX5 SMR:D6RHX5 Ensembl:ENST00000502315
ArrayExpress:D6RHX5 Bgee:D6RHX5 Uniprot:D6RHX5
Length = 99
Score = 94 (38.1 bits), Expect = 0.00057, P = 0.00057
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 107 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN-ECPACRT 150
++CP+CL + + V+ C H FC+ C+ + N CP CRT
Sbjct: 10 LECPVCLERLDASAKVLPCQHTFCKRCLLGIVGSRNELRCPECRT 54
>UNIPROTKB|Q5EBN2 [details] [associations]
symbol:TRIM61 "Putative tripartite motif-containing protein
61" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HSSP:Q9CQJ4 KO:K12029 EMBL:BC089393
IPI:IPI00058949 RefSeq:NP_001012414.1 UniGene:Hs.654633
ProteinModelPortal:Q5EBN2 SMR:Q5EBN2 STRING:Q5EBN2
PhosphoSite:Q5EBN2 DMDM:74741447 PRIDE:Q5EBN2
Ensembl:ENST00000329314 GeneID:391712 KEGG:hsa:391712
UCSC:uc003iqw.3 CTD:391712 GeneCards:GC04M165875 HGNC:HGNC:24339
HPA:HPA049109 neXtProt:NX_Q5EBN2 PharmGKB:PA134868214
eggNOG:NOG257669 HOGENOM:HOG000203866 HOVERGEN:HBG094090
InParanoid:Q5EBN2 OMA:SAHFNLR OrthoDB:EOG4SXNDK GenomeRNAi:391712
NextBio:104795 Bgee:Q5EBN2 CleanEx:HS_TRIM61 Genevestigator:Q5EBN2
Uniprot:Q5EBN2
Length = 209
Score = 110 (43.8 bits), Expect = 0.00061, P = 0.00061
Identities = 27/76 (35%), Positives = 39/76 (51%)
Query: 94 EFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMR-LGNN-ECPACRTH 151
EFV L ++R + CPICL +K T+ C H FC CI S + L ++ CP C
Sbjct: 2 EFV-TALADLRAEASCPICLDYLKDPVTI-SCGHNFCLSCIIMSWKDLHDSFPCPFCHFC 59
Query: 152 CASRRSLRDDPNYDAL 167
C R+ + +P +L
Sbjct: 60 CPERKFI-SNPQLGSL 74
>WB|WBGene00008684 [details] [associations]
symbol:mig-32 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0045138 "tail tip morphogenesis" evidence=IMP]
[GO:0030334 "regulation of cell migration" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0033522 "histone H2A
ubiquitination" evidence=IMP] [GO:0046662 "regulation of
oviposition" evidence=IMP] [GO:0048841 "regulation of axon
extension involved in axon guidance" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IGI]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0009792 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 GO:GO:0000003 GO:GO:0030334
GO:GO:0046662 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0045138
GO:GO:0040027 InterPro:IPR017907 GeneTree:ENSGT00550000074463
GO:GO:0048841 eggNOG:NOG277991 GO:GO:0033522 EMBL:Z68297
GeneID:178150 KEGG:cel:CELE_F11A10.3 CTD:178150
RefSeq:NP_001255620.1 ProteinModelPortal:Q19336 SMR:Q19336
IntAct:Q19336 STRING:Q19336 PaxDb:Q19336 EnsemblMetazoa:F11A10.3a
UCSC:F11A10.3 WormBase:F11A10.3a HOGENOM:HOG000017899
InParanoid:Q19336 OMA:TMNTLKK NextBio:899926 ArrayExpress:Q19336
Uniprot:Q19336
Length = 549
Score = 109 (43.4 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 107 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRT 150
+ C IC G I T+++C+H FC+ C+ NN CP C T
Sbjct: 327 ITCGICDGYIVDATTIIDCMHTFCKSCLLTYFESDNNTCPTCGT 370
Score = 51 (23.0 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 16/63 (25%), Positives = 29/63 (46%)
Query: 354 RSTRLNKLVEYLRS-LQENNDELDVRLMLVSADTQCAPSLQQPYLCCQPSLSVKQLCEYV 412
R T N+ R + D+ V + L+ T P + +PY+ C ++ L +++
Sbjct: 436 RITGTNRCYPLERPRFSHHRDDCQVTVNLLPG-TANLPLITRPYVRCSEMTTMNTLKKFL 494
Query: 413 SLQ 415
SLQ
Sbjct: 495 SLQ 497
>UNIPROTKB|Q90X96 [details] [associations]
symbol:brca1 "Breast and ovarian cancer susceptibility
protein" species:8355 "Xenopus laevis" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184
InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006281
Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 InterPro:IPR017907 PANTHER:PTHR13763 CTD:672
KO:K10605 InterPro:IPR025994 Pfam:PF12820 HSSP:P38398 EMBL:AF416868
RefSeq:NP_001084248.1 UniGene:Xl.12105 ProteinModelPortal:Q90X96
SMR:Q90X96 IntAct:Q90X96 GeneID:399391 KEGG:xla:399391
Xenbase:XB-GENE-6254021 HOVERGEN:HBG073951 Uniprot:Q90X96
Length = 1579
Score = 122 (48.0 bits), Expect = 0.00072, P = 0.00072
Identities = 26/113 (23%), Positives = 57/113 (50%)
Query: 103 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM---RLGNNECPACRTHCASRRSLR 159
++K+++CPICL ++K+ +C H FC+ C+ + + + G CP C+T +RRSL+
Sbjct: 18 MQKNLECPICLELMKEP-VATKCDHIFCKFCMLQLLSKKKKGTVPCPLCKTE-VTRRSLQ 75
Query: 160 DDPNYDALISALYPDIDKYXXXXXXXXXXXRTRNKQIQASIAKIFQRQSEALV 212
+ + L+ I + + K + ++I + ++ +++V
Sbjct: 76 ESHRFKLLVEGQLKIIKAFEFDSGYKFFPSQEHTKGLDSTIEDVLVKEDQSIV 128
>MGI|MGI:2135752 [details] [associations]
symbol:Dtx3 "deltex 3 homolog (Drosophila)" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IDA;TAS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 MGI:MGI:2135752 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0007219 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:NOG84763 HOGENOM:HOG000007352 KO:K06058
GeneTree:ENSGT00440000035370 CTD:196403 HOVERGEN:HBG045495
EMBL:AB015425 EMBL:BC099687 EMBL:BC138304 EMBL:BC157899
IPI:IPI00330413 RefSeq:NP_109639.1 UniGene:Mm.271724
ProteinModelPortal:Q80V91 SMR:Q80V91 STRING:Q80V91
PhosphoSite:Q80V91 PaxDb:Q80V91 PRIDE:Q80V91
Ensembl:ENSMUST00000038217 GeneID:80904 KEGG:mmu:80904
UCSC:uc007hil.1 ChiTaRS:DTX3 NextBio:350250 Bgee:Q80V91
CleanEx:MM_DTX3 Genevestigator:Q80V91 GermOnline:ENSMUSG00000040415
Uniprot:Q80V91
Length = 347
Score = 114 (45.2 bits), Expect = 0.00073, P = 0.00073
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 101 PEIRKDVQ-----CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 148
P +R+D + CPICLG I+ +T+ +C H FC CI +++++ CP C
Sbjct: 151 PRLREDAEEQETTCPICLGEIQNAKTLEKCRHSFCEGCITRALQV-KKACPMC 202
>UNIPROTKB|F1LY78 [details] [associations]
symbol:Dtx3 "Protein Dtx3" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 RGD:1566181
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00440000035370
IPI:IPI00991273 ProteinModelPortal:F1LY78
Ensembl:ENSRNOT00000006815 ArrayExpress:F1LY78 Uniprot:F1LY78
Length = 347
Score = 114 (45.2 bits), Expect = 0.00073, P = 0.00073
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 101 PEIRKDVQ-----CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 148
P +R+D + CPICLG I+ +T+ +C H FC CI +++++ CP C
Sbjct: 151 PRLREDAEEQETTCPICLGEIQNAKTLEKCRHSFCEGCITRALQV-KKACPMC 202
>TAIR|locus:2033103 [details] [associations]
symbol:DRIP1 "DREB2A-interacting protein 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009414 "response to water deprivation" evidence=IGI]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0051865
"protein autoubiquitination" evidence=IDA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0009414
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0051865 EMBL:AC011001 EMBL:BX815334
EMBL:BT033132 IPI:IPI00534763 IPI:IPI00536628 PIR:E86202
RefSeq:NP_172162.3 RefSeq:NP_973775.1 UniGene:At.28756
ProteinModelPortal:Q9M9Y4 SMR:Q9M9Y4 IntAct:Q9M9Y4 PaxDb:Q9M9Y4
PRIDE:Q9M9Y4 EnsemblPlants:AT1G06770.1 GeneID:837188
KEGG:ath:AT1G06770 TAIR:At1g06770 eggNOG:NOG277991
HOGENOM:HOG000240404 InParanoid:Q3EDH5 KO:K16277 OMA:LNKFTQN
PhylomeDB:Q9M9Y4 ProtClustDB:CLSN2688579 Genevestigator:Q9M9Y4
Uniprot:Q9M9Y4
Length = 421
Score = 115 (45.5 bits), Expect = 0.00079, P = 0.00079
Identities = 26/78 (33%), Positives = 38/78 (48%)
Query: 98 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE-CPACRTHCASR- 155
V+ +R + C IC I++ T+ ECLH FCR+CI + + E CP C S
Sbjct: 5 VKKETMRACLSCSICDNILRDATTISECLHTFCRKCIYEKITEDEIETCPVCNIDLGSTP 64
Query: 156 -RSLRDDPNYDALISALY 172
LR D N L + ++
Sbjct: 65 LEKLRPDHNLQDLRAKIF 82
>UNIPROTKB|G3V8S5 [details] [associations]
symbol:Brca1 "RCG34321, isoform CRA_a" species:10116
"Rattus norvegicus" [GO:0000794 "condensed nuclear chromosome"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IEA]
[GO:0007098 "centrosome cycle" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0035067 "negative
regulation of histone acetylation" evidence=IEA] [GO:0043009
"chordate embryonic development" evidence=IEA] [GO:0044030
"regulation of DNA methylation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0051572
"negative regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051573 "negative regulation of histone H3-K9 methylation"
evidence=IEA] [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0070512 "positive regulation of
histone H4-K20 methylation" evidence=IEA] [GO:2000617 "positive
regulation of histone H3-K9 acetylation" evidence=IEA] [GO:2000620
"positive regulation of histone H4-K16 acetylation" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 RGD:2218 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
EMBL:CH473948 InterPro:IPR017907 PANTHER:PTHR13763
InterPro:IPR025994 Pfam:PF12820 GeneTree:ENSGT00440000034289
OMA:CMLKLLN Ensembl:ENSRNOT00000028109 Uniprot:G3V8S5
Length = 1817
Score = 122 (48.0 bits), Expect = 0.00084, P = 0.00084
Identities = 26/81 (32%), Positives = 47/81 (58%)
Query: 100 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDK--SMRLGNNECPACRTHCASRRS 157
L ++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LHAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNEI-TKRS 72
Query: 158 LRDDPNYDALISALYPDIDKY 178
L+ + L+ L ID +
Sbjct: 73 LQGSARFSQLVEELLKIIDAF 93
>UNIPROTKB|I3LJN8 [details] [associations]
symbol:DTX3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00440000035370
Ensembl:ENSSSCT00000029673 OMA:ETSDICE Uniprot:I3LJN8
Length = 337
Score = 113 (44.8 bits), Expect = 0.00089, P = 0.00089
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 99 ELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 148
E PE ++ CPICLG I+ +T+ +C H FC CI +++++ CP C
Sbjct: 145 EEPE-EQESTCPICLGEIQNAKTLEKCRHSFCEGCITRALQV-KKACPMC 192
>ZFIN|ZDB-GENE-060421-8366 [details] [associations]
symbol:trim35-24 "tripartite motif containing
35-24" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-060421-8366 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 eggNOG:NOG285726 HOGENOM:HOG000124586
OrthoDB:EOG4QNMW8 GeneTree:ENSGT00680000099496 HOVERGEN:HBG106887
EMBL:AL954363 EMBL:BC171409 EMBL:BC171411 IPI:IPI00608895
RefSeq:NP_001038176.1 UniGene:Dr.132955 Ensembl:ENSDART00000057459
GeneID:557392 KEGG:dre:557392 CTD:557392 NextBio:20881973
Uniprot:Q1MT09
Length = 460
Score = 115 (45.5 bits), Expect = 0.00090, P = 0.00090
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 100 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN-ECPACRTHCASRRSL 158
L + +++ CP+C I + ++ C H C+EC+ + R ECP CR RRS
Sbjct: 6 LNDSEEELSCPVCCEIFRNP-VLLSCSHSVCKECLQQYWRTKTTQECPVCR-----RRSS 59
Query: 159 RDDP 162
RDDP
Sbjct: 60 RDDP 63
>RGD|1566181 [details] [associations]
symbol:Dtx3 "deltex homolog 3 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 RGD:1566181
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0007219
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 OMA:GPQLCDS
IPI:IPI00779030 Ensembl:ENSRNOT00000057923 ArrayExpress:F1M4I9
Uniprot:F1M4I9
Length = 397
Score = 114 (45.2 bits), Expect = 0.00092, P = 0.00092
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 101 PEIRKDVQ-----CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 148
P +R+D + CPICLG I+ +T+ +C H FC CI +++++ CP C
Sbjct: 151 PRLREDAEEQETTCPICLGEIQNAKTLEKCRHSFCEGCITRALQV-KKACPMC 202
>UNIPROTKB|F1SKF4 [details] [associations]
symbol:DTX3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0007219 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00440000035370
OMA:GPQLCDS EMBL:FP016095 Ensembl:ENSSSCT00000000484 Uniprot:F1SKF4
Length = 346
Score = 113 (44.8 bits), Expect = 0.00094, P = 0.00094
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 99 ELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 148
E PE ++ CPICLG I+ +T+ +C H FC CI +++++ CP C
Sbjct: 154 EEPE-EQESTCPICLGEIQNAKTLEKCRHSFCEGCITRALQV-KKACPMC 201
>UNIPROTKB|E2RD64 [details] [associations]
symbol:TRIM4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407
GeneTree:ENSGT00690000101646 CTD:89122 KO:K11998 EMBL:AAEX03004276
RefSeq:XP_850838.1 ProteinModelPortal:E2RD64
Ensembl:ENSCAFT00000023668 GeneID:608654 KEGG:cfa:608654
OMA:WAICWSS Uniprot:E2RD64
Length = 475
Score = 115 (45.5 bits), Expect = 0.00095, P = 0.00095
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 98 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE--CPACRTHCASR 155
+E ++++D+ C ICL ++ ++ EC H FCR C+ +S G CP CR H +
Sbjct: 1 MEAEDLQEDLTCSICLDYFEEPVSI-ECGHNFCRGCLHRSWAPGGGSFPCPECR-HLSPP 58
Query: 156 RSLRDDPNY 164
SLR PN+
Sbjct: 59 ASLR--PNW 65
>UNIPROTKB|Q3B891 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0007420 GO:GO:0032355
GO:GO:0005759 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0007584 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000794 InterPro:IPR017907
PANTHER:PTHR13763 InterPro:IPR025994 Pfam:PF12820 EMBL:AC060780
EMBL:AC135721 UniGene:Hs.194143 HGNC:HGNC:1100 ChiTaRS:BRCA1
GO:GO:0043009 GO:GO:0009048 GO:GO:0007098 HOGENOM:HOG000142477
HOVERGEN:HBG061757 EMBL:BC106745 IPI:IPI00946108 SMR:Q3B891
STRING:Q3B891 Ensembl:ENST00000494123 Uniprot:Q3B891
Length = 473
Score = 116 (45.9 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 23/71 (32%), Positives = 44/71 (61%)
Query: 103 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDK--SMRLGNNECPACRTHCASRRSLRD 160
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 161 DPNYDALISAL 171
+ L+ L
Sbjct: 76 STRFSQLVEEL 86
Score = 40 (19.1 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 23/94 (24%), Positives = 38/94 (40%)
Query: 390 PSLQQPYLCCQPS-------LSVKQLCE--YVSLQTPLQAEEVEILMVKERLDAKGNQS- 439
PSLQ+ L Q S L KQ + S+ L ++ E + K + G+Q
Sbjct: 145 PSLQETSLSVQLSNLGTVRTLRTKQRIQPQKTSVYIELGSDSSEDTVNKATYCSVGDQEL 204
Query: 440 ---TPIPTTDQLQILEGQETLAGLRVNHTSNTDH 470
TP T D++ + ++ +NT+H
Sbjct: 205 LQITPQGTRDEISLDSAKKAACEFSETDVTNTEH 238
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.131 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 481 362 0.00082 117 3 11 22 0.40 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 112
No. of states in DFA: 611 (65 KB)
Total size of DFA: 238 KB (2129 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.19u 0.14s 28.33t Elapsed: 00:00:02
Total cpu time: 28.19u 0.14s 28.33t Elapsed: 00:00:02
Start: Sat May 11 02:24:34 2013 End: Sat May 11 02:24:36 2013
WARNINGS ISSUED: 1