Query 011622
Match_columns 481
No_of_seqs 360 out of 1964
Neff 6.0
Searched_HMMs 13730
Date Mon Mar 25 11:57:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011622.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/011622hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2c2la2 g.44.1.2 (A:225-304) S 99.5 1E-14 7.4E-19 117.0 4.7 68 103-172 4-71 (80)
2 d1t1ha_ g.44.1.2 (A:) E3 ubiqu 99.5 1.3E-14 9.4E-19 115.7 5.1 67 103-171 5-71 (78)
3 d1rmda2 g.44.1.1 (A:1-86) V(D) 99.4 1.5E-14 1.1E-18 118.0 3.8 67 101-168 18-84 (86)
4 d1jm7b_ g.44.1.1 (B:) bard1 RI 99.4 2.2E-14 1.6E-18 119.0 3.8 70 98-171 14-83 (97)
5 d1jm7a_ g.44.1.1 (A:) brca1 RI 99.4 1.1E-14 7.8E-19 122.2 1.9 72 99-172 14-87 (103)
6 d1wgma_ g.44.1.2 (A:) Ubiquiti 99.3 1.8E-12 1.3E-16 107.8 6.5 67 103-172 19-86 (98)
7 d1fbva4 g.44.1.1 (A:356-434) C 99.3 1.3E-12 9.6E-17 104.4 4.9 54 107-161 24-77 (79)
8 d2baya1 g.44.1.2 (A:1-56) Pre- 99.2 2.1E-12 1.5E-16 96.6 1.7 47 107-154 1-47 (56)
9 d1chca_ g.44.1.1 (A:) Immediat 99.2 2.9E-12 2.1E-16 99.4 2.4 47 107-154 6-52 (68)
10 d1g25a_ g.44.1.1 (A:) TFIIH Ma 99.1 1.1E-11 7.8E-16 95.4 3.4 49 106-154 3-55 (65)
11 d1iyma_ g.44.1.1 (A:) EL5 RING 99.1 3.1E-11 2.3E-15 89.9 4.0 49 103-152 2-53 (55)
12 d1bora_ g.44.1.1 (A:) Acute pr 99.1 2.1E-11 1.5E-15 91.2 3.0 45 106-155 6-50 (56)
13 d1ur6b_ g.44.1.1 (B:) Not-4 N- 99.1 3.7E-11 2.7E-15 88.3 3.6 48 107-154 1-51 (52)
14 d1v87a_ g.44.1.1 (A:) Deltex p 98.8 1.5E-09 1.1E-13 91.4 4.4 50 106-155 25-95 (114)
15 d3dplr1 g.44.1.1 (R:19-106) RI 98.7 3.8E-09 2.8E-13 85.4 4.1 47 107-154 22-85 (88)
16 d1vyxa_ g.44.1.3 (A:) IE1B pro 98.5 3.7E-08 2.7E-12 73.8 3.3 48 106-154 6-59 (60)
17 d1wima_ g.44.1.1 (A:) UbcM4-in 97.8 3.1E-06 2.3E-10 68.1 2.4 45 106-150 5-58 (94)
18 d2cs3a1 g.44.1.3 (A:8-87) Prot 89.9 0.22 1.6E-05 37.3 5.1 42 106-148 8-57 (80)
19 d3d32a1 d.15.1.3 (A:1-118) GAB 88.3 0.2 1.5E-05 41.3 4.3 85 376-478 30-114 (118)
20 d1z60a1 g.49.1.2 (A:328-386) T 86.5 0.2 1.4E-05 36.3 2.8 45 103-148 12-58 (59)
21 d1weoa_ g.44.1.1 (A:) Cellulos 85.0 0.39 2.8E-05 37.2 3.9 49 106-154 16-70 (93)
22 d2zjda1 d.15.1.3 (A:2-120) Mic 83.3 0.55 4E-05 38.5 4.5 84 377-477 30-114 (119)
23 d1zbdb_ g.50.1.1 (B:) Effector 75.5 3.1 0.00022 33.7 6.8 44 107-150 49-99 (124)
24 d1eo6a_ d.15.1.3 (A:) Golgi-as 69.4 1.7 0.00013 35.2 3.7 84 376-477 28-111 (116)
25 d1y02a2 g.50.1.1 (A:20-70) Rif 55.8 1.1 8.1E-05 31.1 -0.0 42 108-150 2-46 (51)
26 d2ct7a1 g.44.1.4 (A:8-80) Ring 53.0 1.4 0.00011 32.4 0.2 34 106-139 18-56 (73)
27 d2jnea1 g.41.18.1 (A:1-71) Hyp 52.1 1 7.3E-05 33.5 -0.8 42 106-154 2-43 (71)
28 d1dvpa2 g.50.1.1 (A:149-220) H 51.5 3.6 0.00026 30.3 2.3 34 105-138 12-48 (72)
29 d1wila_ g.50.1.3 (A:) Hypothet 49.2 5.1 0.00037 30.5 2.8 33 103-137 12-47 (89)
30 d1f62a_ g.50.1.2 (A:) Williams 47.3 7.7 0.00056 26.0 3.4 43 108-150 2-49 (51)
31 d2o35a1 a.293.1.1 (A:2-80) Hyp 45.4 3 0.00022 31.3 0.9 12 128-139 39-50 (79)
32 d1wz3a1 d.15.1.7 (A:10-93) Aut 44.9 11 0.00079 28.6 4.1 79 377-478 3-81 (84)
33 d1vfya_ g.50.1.1 (A:) vps27p p 43.3 6.6 0.00048 28.2 2.6 32 107-138 6-40 (67)
34 d2gmga1 a.4.5.82 (A:1-105) Hyp 40.3 5.2 0.00038 31.7 1.7 33 115-153 63-95 (105)
35 d1weva_ g.50.1.2 (A:) PHD fing 39.5 3.7 0.00027 30.9 0.6 49 105-153 15-74 (88)
36 d1wd2a_ g.44.1.1 (A:) Ariadne- 39.2 4.2 0.00031 28.9 0.9 33 107-139 7-46 (60)
37 d1fp0a1 g.50.1.2 (A:19-88) Nuc 38.6 7 0.00051 28.2 2.1 45 107-152 8-55 (70)
38 d2e74h1 f.23.27.1 (H:3-29) Pet 37.4 2.1 0.00015 25.2 -0.9 12 324-335 15-26 (27)
39 d1joca1 g.50.1.1 (A:1348-1411) 36.8 8.4 0.00061 27.4 2.2 33 106-138 8-43 (64)
40 d1mm2a_ g.50.1.2 (A:) Mi2-beta 35.3 9.3 0.00068 26.7 2.2 43 108-151 11-56 (61)
41 d1ibia2 g.39.1.3 (A:145-175) C 32.6 6.2 0.00045 24.0 0.7 29 107-135 1-29 (31)
42 d1z2ma2 d.15.1.1 (A:79-154) In 31.1 19 0.0014 25.8 3.5 48 372-427 1-48 (76)
43 d2epqa1 g.37.1.1 (A:380-411) P 30.5 6.9 0.0005 23.9 0.7 11 107-117 4-14 (32)
44 d1we9a_ g.50.1.2 (A:) PHD fing 30.4 7.5 0.00055 27.3 1.0 46 106-151 6-58 (64)
45 d2fiya1 e.59.1.1 (A:19-308) Fd 30.2 7.7 0.00056 36.0 1.3 46 105-151 163-213 (290)
46 d1we6a_ d.15.1.1 (A:) Splicing 29.7 17 0.0012 28.6 3.2 72 346-427 3-76 (111)
47 d1wesa_ g.50.1.2 (A:) PHD Inhi 27.4 21 0.0015 25.8 3.1 44 107-151 17-65 (71)
48 d1wfka_ g.50.1.1 (A:) Zinc fin 23.7 15 0.0011 27.7 1.8 34 106-139 9-45 (88)
49 d1m94a_ d.15.1.1 (A:) Ubiquiti 23.4 28 0.002 24.7 3.2 31 397-427 16-46 (73)
50 d1wewa_ g.50.1.2 (A:) Sumoylat 22.1 15 0.0011 26.8 1.3 45 106-151 16-72 (78)
51 d1wfpa_ g.80.1.1 (A:) Zinc fin 21.5 47 0.0034 24.3 4.1 41 106-150 25-65 (74)
52 d1lkoa2 g.41.5.1 (A:148-191) R 21.1 13 0.00095 24.8 0.7 24 123-153 12-35 (44)
53 d2zeqa1 d.15.1.1 (A:1-78) Ubiq 20.8 30 0.0022 25.0 2.9 31 397-427 17-47 (78)
54 d1wh3a_ d.15.1.1 (A:) 2'-5'-ol 20.3 44 0.0032 24.4 3.9 47 373-427 6-52 (87)
55 d1wfla_ g.80.1.1 (A:) Zinc fin 20.1 55 0.004 23.9 4.2 28 106-134 25-53 (74)
No 1
>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.47 E-value=1e-14 Score=116.95 Aligned_cols=68 Identities=13% Similarity=0.157 Sum_probs=60.5
Q ss_pred ccCcccccccccccccceecccCCCcccHHHHhhhhhcCCCCCCCccccccCCCCCCCChhhhHHHHhhc
Q 011622 103 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALISALY 172 (481)
Q Consensus 103 l~~~l~CpICl~~l~~Pv~i~~CgH~FC~~CI~~~l~~~~~~CP~CR~~~~~~~~l~~n~~L~~li~~l~ 172 (481)
+.+++.||||+++|.+||+ ++|||+||..||..|+..+...||.|+.++.. ..+.+|..|.++|+.+.
T Consensus 4 iP~~l~CpIc~~l~~dPv~-~~cGhtfc~~ci~~~l~~~~~~cP~c~~~l~~-~~l~pN~~L~~~I~~~l 71 (80)
T d2c2la2 4 IPDYLCGKISFELMREPCI-TPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQ-EQLIPNLAMKEVIDAFI 71 (80)
T ss_dssp CCSTTBCTTTCSBCSSEEE-CSSCCEEETTHHHHHHHHTCSSCTTTCCCCCG-GGCEECHHHHHHHHHHH
T ss_pred CCccccCcCcCchhhhhcc-cCCcCeecHHHHHHHHhcCCccCCCccccccc-cccccHHHHHHHHHHHH
Confidence 4578999999999999997 89999999999999998666789999999886 56889999999997754
No 2
>d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.47 E-value=1.3e-14 Score=115.72 Aligned_cols=67 Identities=21% Similarity=0.390 Sum_probs=60.3
Q ss_pred ccCcccccccccccccceecccCCCcccHHHHhhhhhcCCCCCCCccccccCCCCCCCChhhhHHHHhh
Q 011622 103 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALISAL 171 (481)
Q Consensus 103 l~~~l~CpICl~~l~~Pv~i~~CgH~FC~~CI~~~l~~~~~~CP~CR~~~~~~~~l~~n~~L~~li~~l 171 (481)
+.+++.||||+++|.+||+ ++|||+||+.||..|+..+...||.|+.++.. ..+.+|..|.++|..+
T Consensus 5 iP~~l~CpIc~~~m~dPV~-~~cgh~fc~~ci~~~~~~~~~~cP~~~~~l~~-~~l~pN~~L~~~I~~~ 71 (78)
T d1t1ha_ 5 FPEYFRCPISLELMKDPVI-VSTGQTYERSSIQKWLDAGHKTCPKSQETLLH-AGLTPNYVLKSLIALW 71 (78)
T ss_dssp CSSSSSCTTTSCCCSSEEE-ETTTEEEEHHHHHHHHTTTCCBCTTTCCBCSS-CCCEECTTTHHHHHHH
T ss_pred CCccCCCcCcCchhhCceE-ccCCCcchHHHHHHHHHHCCCCCCcccccCCc-ccccchHHHHHHHHHH
Confidence 5678999999999999997 89999999999999998666789999999987 6688999999999765
No 3
>d1rmda2 g.44.1.1 (A:1-86) V(D)J recombination activating protein 1 (RAG1), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.45 E-value=1.5e-14 Score=118.00 Aligned_cols=67 Identities=25% Similarity=0.621 Sum_probs=54.8
Q ss_pred ccccCcccccccccccccceecccCCCcccHHHHhhhhhcCCCCCCCccccccCCCCCCCChhhhHHH
Q 011622 101 PEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALI 168 (481)
Q Consensus 101 ~~l~~~l~CpICl~~l~~Pv~i~~CgH~FC~~CI~~~l~~~~~~CP~CR~~~~~~~~l~~n~~L~~li 168 (481)
.++.+.+.|+||++++.+|++ ++|||+||..||..|++.+...||.||.++.......+...+.+++
T Consensus 18 ~d~~~~l~C~IC~~~~~~pv~-~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~p~~~~~l~~P~~~~l~~l 84 (86)
T d1rmda2 18 AHFVKSISCQICEHILADPVE-TSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTDLESPVKSFLNIL 84 (86)
T ss_dssp HHHHHHTBCTTTCSBCSSEEE-CTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCBCCCHHHHHHH
T ss_pred hhhccCcCCccCCcchhccee-cCCCChhhHHHHHHHHhhCCCcCcccCCCCChhhccCHHHHHHHHh
Confidence 344567899999999999997 8999999999999999866678999999988755445565565554
No 4
>d1jm7b_ g.44.1.1 (B:) bard1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=2.2e-14 Score=118.98 Aligned_cols=70 Identities=24% Similarity=0.601 Sum_probs=59.4
Q ss_pred cccccccCcccccccccccccceecccCCCcccHHHHhhhhhcCCCCCCCccccccCCCCCCCChhhhHHHHhh
Q 011622 98 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALISAL 171 (481)
Q Consensus 98 ~~~~~l~~~l~CpICl~~l~~Pv~i~~CgH~FC~~CI~~~l~~~~~~CP~CR~~~~~~~~l~~n~~L~~li~~l 171 (481)
..+..+.+.+.|+||+++|.+|+++++|||+||..||..|+. ..||.||..+.. ..+.+|..|..++..+
T Consensus 14 ~~l~~l~~~l~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~---~~CP~Cr~~~~~-~~l~~n~~l~~lv~~~ 83 (97)
T d1jm7b_ 14 AALDRLEKLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIG---TGCPVCYTPAWI-QDLKINRQLDSMIQLC 83 (97)
T ss_dssp HHHHHHHHTTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTT---TBCSSSCCBCSC-SSCCCCHHHHHHHHHH
T ss_pred HHHHhhhhcCCCccCCchhhcCceeCCCCCchhHHHHHHHHh---ccccccCCcCch-hhCcccHHHHHHHHHH
Confidence 344566788999999999999998679999999999999986 459999998876 6688999988887543
No 5
>d1jm7a_ g.44.1.1 (A:) brca1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=1.1e-14 Score=122.22 Aligned_cols=72 Identities=31% Similarity=0.755 Sum_probs=60.6
Q ss_pred ccccccCcccccccccccccceecccCCCcccHHHHhhhhhcC--CCCCCCccccccCCCCCCCChhhhHHHHhhc
Q 011622 99 ELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLG--NNECPACRTHCASRRSLRDDPNYDALISALY 172 (481)
Q Consensus 99 ~~~~l~~~l~CpICl~~l~~Pv~i~~CgH~FC~~CI~~~l~~~--~~~CP~CR~~~~~~~~l~~n~~L~~li~~l~ 172 (481)
.+..+.+.+.||||+++|.+|++ ++|||+||..||..|+... ...||.||..+.. ..+.+|..+.+++..+.
T Consensus 14 ~~~~l~~~l~CpIC~~~~~~pv~-~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~-~~l~~n~~l~~~ve~l~ 87 (103)
T d1jm7a_ 14 VINAMQKILECPICLELIKEPVS-TKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITK-RSLQESTRFSQLVEELL 87 (103)
T ss_dssp HHHHHHHHTSCSSSCCCCSSCCB-CTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCT-TTCBCCCSSSHHHHHHH
T ss_pred HHHhcccCcCCCccCchhCCeEE-cCCCCchhhHHHHHHHHHCCCCCcCcCCCCcCCh-hhCCcCHHHHHHHHHHH
Confidence 34456778999999999999997 8999999999999999732 3589999999976 66889998888886654
No 6
>d1wgma_ g.44.1.2 (A:) Ubiquitin conjugation factor E4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.28 E-value=1.8e-12 Score=107.85 Aligned_cols=67 Identities=12% Similarity=0.140 Sum_probs=57.8
Q ss_pred ccCcccccccccccccceecccCC-CcccHHHHhhhhhcCCCCCCCccccccCCCCCCCChhhhHHHHhhc
Q 011622 103 IRKDVQCPICLGIIKKTRTVMECL-HRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALISALY 172 (481)
Q Consensus 103 l~~~l~CpICl~~l~~Pv~i~~Cg-H~FC~~CI~~~l~~~~~~CP~CR~~~~~~~~l~~n~~L~~li~~l~ 172 (481)
+.++|.||||+.+|.+||+ ++|+ |+||+.||..||. ....||.|+.++.. ..+.+|..|..+|..+.
T Consensus 19 ~P~~f~CPI~~~lm~dPV~-~~~~~~ty~r~~I~~~l~-~~~~~P~~~~~l~~-~~L~pN~~Lr~~I~~~~ 86 (98)
T d1wgma_ 19 ACDEFLDPIMSTLMCDPVV-LPSSRVTVDRSTIARHLL-SDQTDPFNRSPLTM-DQIRPNTELKEKIQRWL 86 (98)
T ss_dssp CCTTTBCTTTCSBCSSEEE-CTTTCCEEEHHHHHHHTT-TSCBCTTTCSBCCT-TTSEECHHHHHHHHHHH
T ss_pred CcHHhCCcCchhHHHHHHh-cccccchhhHHHHHHHHH-hcCCcccccccccc-hhhcchHHHHHHHHHHH
Confidence 3468999999999999997 6665 5899999999998 55789999999986 67899999999886654
No 7
>d1fbva4 g.44.1.1 (A:356-434) CBL {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.27 E-value=1.3e-12 Score=104.44 Aligned_cols=54 Identities=24% Similarity=0.525 Sum_probs=46.5
Q ss_pred ccccccccccccceecccCCCcccHHHHhhhhhcCCCCCCCccccccCCCCCCCC
Q 011622 107 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD 161 (481)
Q Consensus 107 l~CpICl~~l~~Pv~i~~CgH~FC~~CI~~~l~~~~~~CP~CR~~~~~~~~l~~n 161 (481)
..|+||++.+.+|+. ++|||.||..||..|+..+.+.||+||..+.....+..+
T Consensus 24 ~~C~IC~~~~~~~~~-~~CgH~fC~~Ci~~wl~~~~~~CP~Cr~~i~~~~~i~i~ 77 (79)
T d1fbva4 24 QLCKICAENDKDVKI-EPCGHLMCTSCLTSWQESEGQGCPFCRCEIKGTEPIVVD 77 (79)
T ss_dssp TBCTTTSSSBCCEEC-SSSCCEECHHHHHHHHHTTCCSCTTTCCCCCCCCCSSCC
T ss_pred CCCccCCCcCCCeEE-eCCCCeeeHHHHHHHHHHCcCcCCCCCcCccCCceeecC
Confidence 469999999999996 999999999999999986667899999999875555443
No 8
>d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.18 E-value=2.1e-12 Score=96.57 Aligned_cols=47 Identities=9% Similarity=0.135 Sum_probs=42.3
Q ss_pred ccccccccccccceecccCCCcccHHHHhhhhhcCCCCCCCccccccC
Q 011622 107 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 154 (481)
Q Consensus 107 l~CpICl~~l~~Pv~i~~CgH~FC~~CI~~~l~~~~~~CP~CR~~~~~ 154 (481)
+.|+||++++.+||.+..|||+||..||.+|+.. +..||.||.++..
T Consensus 1 l~C~Ic~~~~~~Pv~~~~cGh~fc~~cI~~~l~~-~~~CP~c~~~l~~ 47 (56)
T d2baya1 1 MLCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKD-TGNDPITNEPLSI 47 (56)
T ss_dssp CCCTTTCSCCSSEEEETTTTEEEEHHHHHHHHHH-HSBCTTTCCBCCG
T ss_pred CCCccCCchHHhcCccCCCCCcccHHHHHHHHhh-ccCCCccCCcCCH
Confidence 4799999999999974579999999999999994 5789999998876
No 9
>d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]}
Probab=99.17 E-value=2.9e-12 Score=99.40 Aligned_cols=47 Identities=38% Similarity=0.877 Sum_probs=41.9
Q ss_pred ccccccccccccceecccCCCcccHHHHhhhhhcCCCCCCCccccccC
Q 011622 107 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 154 (481)
Q Consensus 107 l~CpICl~~l~~Pv~i~~CgH~FC~~CI~~~l~~~~~~CP~CR~~~~~ 154 (481)
..|+||++.|.+++++++|||+||..||..|+.. ...||+||..+..
T Consensus 6 d~C~IC~~~~~~~~~~~~C~H~Fc~~Ci~~w~~~-~~~CP~CR~~i~~ 52 (68)
T d1chca_ 6 ERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQ-NPTCPLCKVPVES 52 (68)
T ss_dssp CCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHH-SCSTTTTCCCCCC
T ss_pred CCCccCCcCccCCcEEeCCCCcCcHHHHHHHHHh-CCcCCCCCcchHh
Confidence 3699999999988777999999999999999994 5889999998754
No 10
>d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.12 E-value=1.1e-11 Score=95.39 Aligned_cols=49 Identities=31% Similarity=0.668 Sum_probs=40.1
Q ss_pred cccccccccccccc----eecccCCCcccHHHHhhhhhcCCCCCCCccccccC
Q 011622 106 DVQCPICLGIIKKT----RTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 154 (481)
Q Consensus 106 ~l~CpICl~~l~~P----v~i~~CgH~FC~~CI~~~l~~~~~~CP~CR~~~~~ 154 (481)
+..||||++.+..+ +.+++|||.||..||..|+..+...||.||+++..
T Consensus 3 d~~CpIC~~~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~~CP~CR~~i~~ 55 (65)
T d1g25a_ 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRK 55 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSS
T ss_pred CCCCCcCCceeecCCceEEEeCccChHhhHHHHHHHhCcCcCCCCCCCcCccc
Confidence 56899999865422 34479999999999999997566789999998865
No 11
>d1iyma_ g.44.1.1 (A:) EL5 RING-H2 domain {Rice (Oryza sativa) [TaxId: 4530]}
Probab=99.07 E-value=3.1e-11 Score=89.86 Aligned_cols=49 Identities=31% Similarity=0.775 Sum_probs=40.2
Q ss_pred ccCcccccccccccccc---eecccCCCcccHHHHhhhhhcCCCCCCCccccc
Q 011622 103 IRKDVQCPICLGIIKKT---RTVMECLHRFCRECIDKSMRLGNNECPACRTHC 152 (481)
Q Consensus 103 l~~~l~CpICl~~l~~P---v~i~~CgH~FC~~CI~~~l~~~~~~CP~CR~~~ 152 (481)
+++...|+||++.|... +.+++|+|.||..||..|+. .+.+||+||..+
T Consensus 2 ~ed~~~C~ICl~~~~~~~~~~~l~~C~H~Fh~~Ci~~Wl~-~~~~CP~CR~~i 53 (55)
T d1iyma_ 2 MDDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLG-SHSTCPLCRLTV 53 (55)
T ss_dssp CCCSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTT-TCCSCSSSCCCS
T ss_pred CCCCCCCeEECccccCCCEEEEeCCCCCcccHHHHHHHHH-hCCcCCCCCCEe
Confidence 34567899999998743 44357999999999999998 568999999865
No 12
>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia proto-oncoprotein PML {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.07 E-value=2.1e-11 Score=91.20 Aligned_cols=45 Identities=27% Similarity=0.732 Sum_probs=39.7
Q ss_pred cccccccccccccceecccCCCcccHHHHhhhhhcCCCCCCCccccccCC
Q 011622 106 DVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 155 (481)
Q Consensus 106 ~l~CpICl~~l~~Pv~i~~CgH~FC~~CI~~~l~~~~~~CP~CR~~~~~~ 155 (481)
.+.|+||++.+.+|+. ++|||+||..||..| ...||.||..+...
T Consensus 6 ~l~C~IC~~~~~~p~~-lpCgH~fC~~Ci~~~----~~~CP~Cr~~~~~~ 50 (56)
T d1bora_ 6 FLRCQQCQAEAKCPKL-LPCLHTLCSGCLEAS----GMQCPICQAPWPLG 50 (56)
T ss_dssp CSSCSSSCSSCBCCSC-STTSCCSBTTTCSSS----SSSCSSCCSSSSCC
T ss_pred CCCCcccCcccCCCEE-ecCCCHHhHHHHHcC----CCcCcCCCCcccCC
Confidence 5789999999999996 899999999999865 46799999988763
No 13
>d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.05 E-value=3.7e-11 Score=88.35 Aligned_cols=48 Identities=29% Similarity=0.651 Sum_probs=39.4
Q ss_pred ccccccccccccc---eecccCCCcccHHHHhhhhhcCCCCCCCccccccC
Q 011622 107 VQCPICLGIIKKT---RTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 154 (481)
Q Consensus 107 l~CpICl~~l~~P---v~i~~CgH~FC~~CI~~~l~~~~~~CP~CR~~~~~ 154 (481)
+.||||++.|... +.+++|||.||..||..|+......||.||+++..
T Consensus 1 leCpICl~~~~~~~~~~~~~~CgH~~c~~C~~~w~~~~~~~CP~CR~~~~~ 51 (52)
T d1ur6b_ 1 VECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPE 51 (52)
T ss_dssp CEETTTTEECCGGGTTCCSSSSSCCCCHHHHHHHTTTSCCBCTTTCCBCSC
T ss_pred CCCcCCChhhhCCCceEEecCCCCccchHHHHHHHhhcCCCCCccCCcCCC
Confidence 4699999988643 23468999999999999998666789999998753
No 14
>d1v87a_ g.44.1.1 (A:) Deltex protein 2 RING-H2 domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.78 E-value=1.5e-09 Score=91.45 Aligned_cols=50 Identities=24% Similarity=0.606 Sum_probs=39.8
Q ss_pred cccccccccccccc-----------------eecccCCCcccHHHHhhhhhcC----CCCCCCccccccCC
Q 011622 106 DVQCPICLGIIKKT-----------------RTVMECLHRFCRECIDKSMRLG----NNECPACRTHCASR 155 (481)
Q Consensus 106 ~l~CpICl~~l~~P-----------------v~i~~CgH~FC~~CI~~~l~~~----~~~CP~CR~~~~~~ 155 (481)
+..|+||++.|..+ +.+++|+|.||..||..|+... ..+||+||+.+...
T Consensus 25 ~~~C~IC~e~l~~~~~~~~~~~~~~~~~~~~~~~~~CgH~FH~~Ci~~Wl~~~~~~~~~~CP~CR~~~~~~ 95 (114)
T d1v87a_ 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEK 95 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSC
T ss_pred cccccchhheecccccccccccccccccccceEECCCCChhhHHHHHHHHHhcCcCCCCccccccchhccC
Confidence 45799999987542 3458999999999999999732 35899999987653
No 15
>d3dplr1 g.44.1.1 (R:19-106) RIGG-box protein 1 (RBX1) of SCF ubiquitin ligase complex {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.70 E-value=3.8e-09 Score=85.44 Aligned_cols=47 Identities=26% Similarity=0.458 Sum_probs=37.7
Q ss_pred cccccccccccc-----------------ceecccCCCcccHHHHhhhhhcCCCCCCCccccccC
Q 011622 107 VQCPICLGIIKK-----------------TRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 154 (481)
Q Consensus 107 l~CpICl~~l~~-----------------Pv~i~~CgH~FC~~CI~~~l~~~~~~CP~CR~~~~~ 154 (481)
..|+||+..+.. ++.+++|||.||..||..|+. .+.+||+||..+..
T Consensus 22 d~C~IC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~-~~~~CP~CR~~~~~ 85 (88)
T d3dplr1 22 DNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLK-TRQVCPLDNREWEF 85 (88)
T ss_dssp CCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHT-TCSBCSSSCSBCCE
T ss_pred CcCEEccchhhCccccccccccccccccCCeEEccccCcccHHHHHHHHH-HCCcCCCCCCcccc
Confidence 358888776653 344579999999999999999 45899999998753
No 16
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]}
Probab=98.46 E-value=3.7e-08 Score=73.76 Aligned_cols=48 Identities=23% Similarity=0.470 Sum_probs=38.8
Q ss_pred cccccccccccccceecccC-----CCcccHHHHhhhhh-cCCCCCCCccccccC
Q 011622 106 DVQCPICLGIIKKTRTVMEC-----LHRFCRECIDKSMR-LGNNECPACRTHCAS 154 (481)
Q Consensus 106 ~l~CpICl~~l~~Pv~i~~C-----gH~FC~~CI~~~l~-~~~~~CP~CR~~~~~ 154 (481)
...|+||++.+.++.. .+| +|.||..||..|+. .++.+||+||+.+..
T Consensus 6 ~~~C~IC~~~~~~~~~-~~c~c~~c~h~~H~~Cl~~W~~~~~~~~CP~Cr~~~~~ 59 (60)
T d1vyxa_ 6 VPVCWICNEELGNERF-RACGCTGELENVHRSCLSTWLTISRNTACQICGVVYNT 59 (60)
T ss_dssp CCEETTTTEECSCCCC-CSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCCC
T ss_pred CCCCccCCccCCCcee-EecccCCCCCEEcHHHHHHHHhhCCCCCCcccCCeeec
Confidence 4579999998877653 454 59999999999996 356799999998763
No 17
>d1wima_ g.44.1.1 (A:) UbcM4-interacting protein 4 (KIAA0161) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.81 E-value=3.1e-06 Score=68.14 Aligned_cols=45 Identities=29% Similarity=0.752 Sum_probs=33.9
Q ss_pred cccccccccccc--cceecccCCCcccHHHHhhhhhc----C---CCCCCCccc
Q 011622 106 DVQCPICLGIIK--KTRTVMECLHRFCRECIDKSMRL----G---NNECPACRT 150 (481)
Q Consensus 106 ~l~CpICl~~l~--~Pv~i~~CgH~FC~~CI~~~l~~----~---~~~CP~CR~ 150 (481)
...|+||++.+. +.+.+++|+|.||..||..|+.. + ...||.|.-
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~C~H~fC~~Cl~~~~~~~i~~~~~~~i~CP~~~C 58 (94)
T d1wima_ 5 SSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAAC 58 (94)
T ss_dssp BCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTC
T ss_pred CCcCccCCCcccCCceEEECCCCCEeCCcCHHHHHHHHHhcCCccccCCcCCCC
Confidence 457999999875 33444789999999999999962 1 236998754
No 18
>d2cs3a1 g.44.1.3 (A:8-87) Protein c14orf4 (KIAA1865) {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.94 E-value=0.22 Score=37.32 Aligned_cols=42 Identities=31% Similarity=0.793 Sum_probs=32.4
Q ss_pred cccccccccccccceecccC----CCcccHHHHhhhhhc----CCCCCCCc
Q 011622 106 DVQCPICLGIIKKTRTVMEC----LHRFCRECIDKSMRL----GNNECPAC 148 (481)
Q Consensus 106 ~l~CpICl~~l~~Pv~i~~C----gH~FC~~CI~~~l~~----~~~~CP~C 148 (481)
.+.|.+|.+.+.+..+ ..| +|.||..|-..+++. +.-.||.-
T Consensus 8 ~l~CtlC~erLEdtHF-VQCPsv~~HkFCFpCsr~sik~q~~~~evyCPSG 57 (80)
T d2cs3a1 8 PLCCTICHERLEDTHF-VQCPSVPSHKFCFPCSRESIKAQGATGEVYCPSG 57 (80)
T ss_dssp SCCCSSSCSCCSSTTS-EECSSCSSCEECHHHHHHHHHHHHSSSCCCCTTS
T ss_pred ceeeeeehhhhcCCce-EeCCCCcCCceeccccHHHHHhcCCCCcEECCCC
Confidence 5789999999998865 455 699999999998872 23356654
No 19
>d3d32a1 d.15.1.3 (A:1-118) GABA(A) receptor associated protein GABARAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.29 E-value=0.2 Score=41.27 Aligned_cols=85 Identities=18% Similarity=0.214 Sum_probs=66.7
Q ss_pred eeEEEEeecCCCCCCCCCCCcccccCcchHHHHHHHhHhccCCcccceEEEEEecccccCCCCCCCCCChhhhhhccccc
Q 011622 376 DVRLMLVSADTQCAPSLQQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKERLDAKGNQSTPIPTTDQLQILEGQE 455 (481)
Q Consensus 376 ~~~l~l~~~d~~~~p~l~~p~l~c~p~~~~~~l~~~va~q~~~~~~e~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 455 (481)
-|++.+-......+|.|.+.-.--..++||.++..+|-..+.+.+++- ||+--+. ... ....
T Consensus 30 riPVIve~~~~s~lp~ldk~KflVp~d~tv~qf~~~iRkrl~l~~~~a-lflfvn~---~~~--------------~~~~ 91 (118)
T d3d32a1 30 RVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDA-LFFFVNN---VIP--------------PTSA 91 (118)
T ss_dssp EEEEEEEECTTCCSCCCSCSEEEEETTCBHHHHHHHHHHHHTCCTTSC-CEEEBTT---BCC--------------CTTC
T ss_pred CceEEEEEcCCCCCcccccceEEecCCccHHHHHHHHHHHhCCCccce-EEEEECC---ccc--------------Cccc
Confidence 377888888888899999998888999999999999999999887774 2322111 111 1247
Q ss_pred ccccccccccCCCCcchhhhhhh
Q 011622 456 TLAGLRVNHTSNTDHLILAYRQK 478 (481)
Q Consensus 456 ~l~~l~~~~~~~~~~l~~~y~~k 478 (481)
||++|+..+-+..|.|||.|..-
T Consensus 92 ti~~lY~~~kdeDGfLYi~Ys~e 114 (118)
T d3d32a1 92 TMGQLYQEHHEEDFFLYIAYSDE 114 (118)
T ss_dssp BHHHHHHHHCCTTSCEEEEEESC
T ss_pred cHHHHHHHhCCCCcEEEEEEecc
Confidence 99999999998899999999753
No 20
>d1z60a1 g.49.1.2 (A:328-386) TFIIH p44 subunit cysteine-rich domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.51 E-value=0.2 Score=36.28 Aligned_cols=45 Identities=24% Similarity=0.564 Sum_probs=32.4
Q ss_pred ccCcccccccccccccc--eecccCCCcccHHHHhhhhhcCCCCCCCc
Q 011622 103 IRKDVQCPICLGIIKKT--RTVMECLHRFCRECIDKSMRLGNNECPAC 148 (481)
Q Consensus 103 l~~~l~CpICl~~l~~P--v~i~~CgH~FC~~CI~~~l~~~~~~CP~C 148 (481)
......|.-|...+.+. .....|++.||..|= -++......||.|
T Consensus 12 ~~~~~~C~gC~~~l~~~~~y~C~~C~~~FC~dCD-~fiHe~lh~CpgC 58 (59)
T d1z60a1 12 YNGERFCYGCQGELKDQHVYVCAVCQNVFCVDCD-VFVHDSLHSCPGC 58 (59)
T ss_dssp HCSCCEETTTTEECTTSEEECCTTTTCCBCHHHH-HTTTTTSCSSSTT
T ss_pred cCCCCCccCCCCcCCCCceEECcCCCCccccccc-hhhhhhhcCCCCC
Confidence 34456799999877754 335779999999994 3344456789988
No 21
>d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=85.02 E-value=0.39 Score=37.20 Aligned_cols=49 Identities=31% Similarity=0.619 Sum_probs=38.1
Q ss_pred ccccccccccccc-----c-eecccCCCcccHHHHhhhhhcCCCCCCCccccccC
Q 011622 106 DVQCPICLGIIKK-----T-RTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 154 (481)
Q Consensus 106 ~l~CpICl~~l~~-----P-v~i~~CgH~FC~~CI~~~l~~~~~~CP~CR~~~~~ 154 (481)
...|.||-+.+-- + |.+-.|+-..|+.|..-=.+.++..||.|.+++..
T Consensus 16 ~q~CqiCGd~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCkt~Ykr 70 (93)
T d1weoa_ 16 GQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYKR 70 (93)
T ss_dssp SCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCCC
T ss_pred cchhhhcccccccCCCCCEEEEecccCCccchHHHHHHHhccCccCcccCChhhh
Confidence 4579999986542 2 33356888899999987777788999999998865
No 22
>d2zjda1 d.15.1.3 (A:2-120) Microtubule-associated proteins 1A/1B light chain 3B {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.32 E-value=0.55 Score=38.52 Aligned_cols=84 Identities=11% Similarity=0.243 Sum_probs=63.4
Q ss_pred eEEEEeecC-CCCCCCCCCCcccccCcchHHHHHHHhHhccCCcccceEEEEEecccccCCCCCCCCCChhhhhhccccc
Q 011622 377 VRLMLVSAD-TQCAPSLQQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKERLDAKGNQSTPIPTTDQLQILEGQE 455 (481)
Q Consensus 377 ~~l~l~~~d-~~~~p~l~~p~l~c~p~~~~~~l~~~va~q~~~~~~e~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 455 (481)
|.+.+.... ...+|.|++.-.==..+|||.++..+|-.++.+.+++-=.+.+.+. . ......
T Consensus 30 iPVIve~~~~~~~lp~Ldk~KfLVp~d~tv~qf~~~iRkrl~l~~~~alFlfvn~~---~--------------~p~~~~ 92 (119)
T d2zjda1 30 IPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGH---S--------------MVSVST 92 (119)
T ss_dssp EEEEEEECTTCCSSCCCSCCEEEEETTCBHHHHHHHHHHHHTCCTTCCEEEEETTT---E--------------ECCTTS
T ss_pred ceEEEEECCCCCcCccccceEEEEecCccHHHHHHHHHHHhCCCCcceEEEEEcCC---c--------------cCCchh
Confidence 777777665 4569999888766788999999999999999998765433333211 0 012257
Q ss_pred ccccccccccCCCCcchhhhhh
Q 011622 456 TLAGLRVNHTSNTDHLILAYRQ 477 (481)
Q Consensus 456 ~l~~l~~~~~~~~~~l~~~y~~ 477 (481)
||++|+..|-...|.|+|.|..
T Consensus 93 ~i~~lY~~~kdeDGfLYi~Ys~ 114 (119)
T d2zjda1 93 PISEVYESEKDEDGFLYMVYAS 114 (119)
T ss_dssp BHHHHHHHHCCTTSCEEEEEEE
T ss_pred HHHHHHHHcCCCCCeEEEEEec
Confidence 8999999998889999999974
No 23
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=75.47 E-value=3.1 Score=33.69 Aligned_cols=44 Identities=16% Similarity=0.400 Sum_probs=28.6
Q ss_pred ccccccccccc----cceecccCCCcccHHHHhhhhh---cCCCCCCCccc
Q 011622 107 VQCPICLGIIK----KTRTVMECLHRFCRECIDKSMR---LGNNECPACRT 150 (481)
Q Consensus 107 l~CpICl~~l~----~Pv~i~~CgH~FC~~CI~~~l~---~~~~~CP~CR~ 150 (481)
..|++|...|. ....+..||+.||..|-..... .....|.+|..
T Consensus 49 ~~C~~C~~~f~~~~~~~~~C~~C~~~~C~~C~~~~~~~~~~~~w~C~~C~k 99 (124)
T d1zbdb_ 49 NRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVETSNNRPHPVWLCKICLE 99 (124)
T ss_dssp SBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEECCCSSSSCCEEEHHHHH
T ss_pred CcCcccCCcccCCCCCCCcCccCCcccccCCCCCccCCCCCCCEECccCcc
Confidence 36999987543 3355688999999999643222 11246777765
No 24
>d1eo6a_ d.15.1.3 (A:) Golgi-associated ATPase enhancer of 16 kD, Gate-16 {Cow (Bos taurus) [TaxId: 9913]}
Probab=69.42 E-value=1.7 Score=35.23 Aligned_cols=84 Identities=13% Similarity=0.222 Sum_probs=65.0
Q ss_pred eeEEEEeecCCCCCCCCCCCcccccCcchHHHHHHHhHhccCCcccceEEEEEecccccCCCCCCCCCChhhhhhccccc
Q 011622 376 DVRLMLVSADTQCAPSLQQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKERLDAKGNQSTPIPTTDQLQILEGQE 455 (481)
Q Consensus 376 ~~~l~l~~~d~~~~p~l~~p~l~c~p~~~~~~l~~~va~q~~~~~~e~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 455 (481)
-|++.+-......+|.|.+.-.=-...|||.++...|-..+.+.+++= ||+--+. . ++....
T Consensus 28 rIPVIve~~~~~~l~~ldk~KfLVP~dltv~qf~~vIRkrl~l~~~~a-lflfv~~---~--------------l~~~s~ 89 (116)
T d1eo6a_ 28 RVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQFMWIIRKRIQLPSEKA-IFLFVDK---T--------------VPQSSL 89 (116)
T ss_dssp EEEEEEEECTTCSSCCCSCCEEEEETTSBHHHHHHHHHHHHTCCTTSC-CEEEBTT---B--------------CCCTTS
T ss_pred CceEEEEECCcCcCCcccCcEEeecCCCcHHHHHHHHHHHcCCCccce-EEEEECC---c--------------ccchhh
Confidence 477777777777899999988888899999999999988888876553 4433221 1 122347
Q ss_pred ccccccccccCCCCcchhhhhh
Q 011622 456 TLAGLRVNHTSNTDHLILAYRQ 477 (481)
Q Consensus 456 ~l~~l~~~~~~~~~~l~~~y~~ 477 (481)
||++|+..+-+..|.|+|.|..
T Consensus 90 ~i~~lY~~~KdeDGfLYi~Ys~ 111 (116)
T d1eo6a_ 90 TMGQLYEKEKDEDGFLYVAYSG 111 (116)
T ss_dssp BHHHHHHHHCCTTSCEEEEEEC
T ss_pred hHHHHHHHcCCCCcEEEEEEec
Confidence 9999999998899999999964
No 25
>d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.78 E-value=1.1 Score=31.08 Aligned_cols=42 Identities=24% Similarity=0.683 Sum_probs=25.7
Q ss_pred cccccccccc---cceecccCCCcccHHHHhhhhhcCCCCCCCccc
Q 011622 108 QCPICLGIIK---KTRTVMECLHRFCRECIDKSMRLGNNECPACRT 150 (481)
Q Consensus 108 ~CpICl~~l~---~Pv~i~~CgH~FC~~CI~~~l~~~~~~CP~CR~ 150 (481)
.|.+|...|. .-.....||..||..|...... ....|..|..
T Consensus 2 ~C~~C~~~F~~~~rkhhCr~CG~~fC~~Cs~~~~~-~~RvC~~C~~ 46 (51)
T d1y02a2 2 SCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGN-GPRLCLLCQR 46 (51)
T ss_dssp CCTTTCCCCSSGGGCEECTTTCCEECGGGEEC-----CCEEHHHHH
T ss_pred CccccCCcccCCccCcccccCCcccCccccCCCCC-CCeECHhHhh
Confidence 3677766554 3444578999999999765433 3356666643
No 26
>d2ct7a1 g.44.1.4 (A:8-80) Ring finger protein 31 {Human (Homo sapiens) [TaxId: 9606]}
Probab=53.02 E-value=1.4 Score=32.45 Aligned_cols=34 Identities=21% Similarity=0.335 Sum_probs=24.4
Q ss_pred ccccccccccccc----c-eecccCCCcccHHHHhhhhh
Q 011622 106 DVQCPICLGIIKK----T-RTVMECLHRFCRECIDKSMR 139 (481)
Q Consensus 106 ~l~CpICl~~l~~----P-v~i~~CgH~FC~~CI~~~l~ 139 (481)
-..||-|...+.. + ++...|++.||..|-..|-.
T Consensus 18 ~k~CP~C~~~~~~~~~~~~~~C~~C~~~fC~~C~~~w~~ 56 (73)
T d2ct7a1 18 FLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEE 56 (73)
T ss_dssp EECCSSSCCCEECCCSCSCEECTTTCCEECSSSCSBCCT
T ss_pred CCCCCCCCCEeEECCCCCEEEcCCCCCeECcccCcchhc
Confidence 4579999876542 1 34457999999999888743
No 27
>d2jnea1 g.41.18.1 (A:1-71) Hypothetical protein YfgJ {Escherichia coli [TaxId: 562]}
Probab=52.14 E-value=1 Score=33.53 Aligned_cols=42 Identities=24% Similarity=0.636 Sum_probs=29.6
Q ss_pred cccccccccccccceecccCCCcccHHHHhhhhhcCCCCCCCccccccC
Q 011622 106 DVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 154 (481)
Q Consensus 106 ~l~CpICl~~l~~Pv~i~~CgH~FC~~CI~~~l~~~~~~CP~CR~~~~~ 154 (481)
++.||.|...+.. .=+|.+|..|-..+-. ...||.|..++..
T Consensus 2 ~~~CP~C~~eL~~-----~~~~~~C~~C~~~~~~--~a~CPdC~~~Le~ 43 (71)
T d2jnea1 2 ELHCPQCQHVLDQ-----DNGHARCRSCGEFIEM--KALCPDCHQPLQV 43 (71)
T ss_dssp CCBCSSSCSBEEE-----ETTEEEETTTCCEEEE--EEECTTTCSBCEE
T ss_pred CCcCCCccCcccc-----cCCCEehhhhhhhhee--EEeCCccccHHHH
Confidence 4689999987552 1267788888665543 3679999887654
No 28
>d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=51.54 E-value=3.6 Score=30.26 Aligned_cols=34 Identities=21% Similarity=0.495 Sum_probs=24.8
Q ss_pred Ccccccccccccc---cceecccCCCcccHHHHhhhh
Q 011622 105 KDVQCPICLGIIK---KTRTVMECLHRFCRECIDKSM 138 (481)
Q Consensus 105 ~~l~CpICl~~l~---~Pv~i~~CgH~FC~~CI~~~l 138 (481)
+...|.+|...|. .....-.||+.||..|....+
T Consensus 12 ~~~~C~~C~~~F~~~~rrhhCr~CG~~~C~~C~~~~~ 48 (72)
T d1dvpa2 12 DGRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAKQC 48 (72)
T ss_dssp CCSBCTTTCCBCCSSSCCEECTTTCCEECSTTSCEEE
T ss_pred cCCccccCCCcccCccccccccccCCeeChhhhCCce
Confidence 3456999987654 345567899999999986543
No 29
>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.25 E-value=5.1 Score=30.51 Aligned_cols=33 Identities=18% Similarity=0.613 Sum_probs=23.6
Q ss_pred ccCcccccccccccccceeccc---CCCcccHHHHhhh
Q 011622 103 IRKDVQCPICLGIIKKTRTVME---CLHRFCRECIDKS 137 (481)
Q Consensus 103 l~~~l~CpICl~~l~~Pv~i~~---CgH~FC~~CI~~~ 137 (481)
+..+..|+|| ..+..-. ++| |+..|+..|+.+.
T Consensus 12 v~~D~mC~vC-~v~t~~~-l~pCRvCtRv~H~~CL~r~ 47 (89)
T d1wila_ 12 VVNDEMCDVC-EVWTAES-LFPCRVCTRVFHDGCLRRM 47 (89)
T ss_dssp CCCSCCCTTT-CCCCSSC-CSSCSSSSSCCCHHHHHHH
T ss_pred CCcCcccccc-Ccccccc-eecceeecchhhHHHHHHh
Confidence 4557789999 5554332 134 7889999999887
No 30
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}
Probab=47.28 E-value=7.7 Score=25.97 Aligned_cols=43 Identities=26% Similarity=0.585 Sum_probs=29.3
Q ss_pred ccccccccccc--ceecccCCCcccHHHHhhhhhc---CCCCCCCccc
Q 011622 108 QCPICLGIIKK--TRTVMECLHRFCRECIDKSMRL---GNNECPACRT 150 (481)
Q Consensus 108 ~CpICl~~l~~--Pv~i~~CgH~FC~~CI~~~l~~---~~~~CP~CR~ 150 (481)
.|.||...-.. -+..-.|...|+..|+..-+.. +...||.|+.
T Consensus 2 ~C~vC~~~~~~~~~i~Cd~C~~~~H~~C~~p~~~~~p~~~W~C~~C~~ 49 (51)
T d1f62a_ 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCcCcCCCCCCCCEEEcCCCCCCCCCCCCCCCCCcCCCCCEECcCCcC
Confidence 47788654321 2334568899999999887652 3457999975
No 31
>d2o35a1 a.293.1.1 (A:2-80) Hypothetical protein SMc04008 {Rhizobium meliloti [TaxId: 382]}
Probab=45.45 E-value=3 Score=31.34 Aligned_cols=12 Identities=42% Similarity=1.107 Sum_probs=11.0
Q ss_pred cccHHHHhhhhh
Q 011622 128 RFCRECIDKSMR 139 (481)
Q Consensus 128 ~FC~~CI~~~l~ 139 (481)
-||+.|+.+|+.
T Consensus 39 GFCRNCLskWy~ 50 (79)
T d2o35a1 39 GFCRNCLSNWYR 50 (79)
T ss_dssp SCCHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 499999999996
No 32
>d1wz3a1 d.15.1.7 (A:10-93) Autophagy-related protein 12b (APG12b) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=44.88 E-value=11 Score=28.62 Aligned_cols=79 Identities=18% Similarity=0.231 Sum_probs=58.0
Q ss_pred eEEEEeecCCCCCCCCCCCcccccCcchHHHHHHHhHhccCCcccceEEEEEecccccCCCCCCCCCChhhhhhcccccc
Q 011622 377 VRLMLVSADTQCAPSLQQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKERLDAKGNQSTPIPTTDQLQILEGQET 456 (481)
Q Consensus 377 ~~l~l~~~d~~~~p~l~~p~l~c~p~~~~~~l~~~va~q~~~~~~e~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 456 (481)
|.+.|.|. -.+|-|++--.-=-++-+|.-+..|+..++. .+-|=+||-. ++..+ | +++
T Consensus 3 V~v~fk~i--G~aPilk~~~~kv~~~~~f~~vi~FLrk~Lk--~dsvf~Yin~---sFaPs-----p----------De~ 60 (84)
T d1wz3a1 3 IVVHLRAT--GGAPILKQSKFKVSGSDKFANVIDFLRRQLH--SDSLFVYVNS---AFSPN-----P----------DES 60 (84)
T ss_dssp EEEEEEEC--TTCCCCSCCEEEEETTSBTHHHHHHHHHHHT--CSSCEEEEEE---EECCC-----T----------TSB
T ss_pred EEEEEEec--CCCcccccceEEECCCCchHHHHHHHHHHhc--CCeEEEEEcc---ccCCC-----h----------hhH
Confidence 34455555 3479998888888889999999999999996 4566666632 23322 2 468
Q ss_pred cccccccccCCCCcchhhhhhh
Q 011622 457 LAGLRVNHTSNTDHLILAYRQK 478 (481)
Q Consensus 457 l~~l~~~~~~~~~~l~~~y~~k 478 (481)
++.|+..|. .+|.|++.|...
T Consensus 61 vg~Ly~~f~-~~gkLvv~Y~~t 81 (84)
T d1wz3a1 61 VIDLYNNFG-FDGKLVVNYACS 81 (84)
T ss_dssp HHHHHHHHC-BTTBEEEEEESC
T ss_pred HHHHHHhcC-CCCEEEEEEecc
Confidence 999998886 899999999753
No 33
>d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=43.30 E-value=6.6 Score=28.21 Aligned_cols=32 Identities=25% Similarity=0.512 Sum_probs=23.3
Q ss_pred ccccccccccc---cceecccCCCcccHHHHhhhh
Q 011622 107 VQCPICLGIIK---KTRTVMECLHRFCRECIDKSM 138 (481)
Q Consensus 107 l~CpICl~~l~---~Pv~i~~CgH~FC~~CI~~~l 138 (481)
..|.+|...|. .....-.||..||..|....+
T Consensus 6 ~~C~~C~~~F~~~~rkhhCr~CG~~fC~~Cs~~~~ 40 (67)
T d1vfya_ 6 DACMICSKKFSLLNRKHHCRSCGGVFCQEHSSNSI 40 (67)
T ss_dssp SBCTTTCCBCBTTBCCEECTTTCCEECGGGSCEEE
T ss_pred cccccCCCcccCcccccccccCCCEecccccCCcE
Confidence 36999987654 344456799999999975543
No 34
>d2gmga1 a.4.5.82 (A:1-105) Hypothetical protein PF0610 {Pyrococcus furiosus [TaxId: 2261]}
Probab=40.35 E-value=5.2 Score=31.72 Aligned_cols=33 Identities=18% Similarity=0.525 Sum_probs=22.6
Q ss_pred ccccceecccCCCcccHHHHhhhhhcCCCCCCCcccccc
Q 011622 115 IIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCA 153 (481)
Q Consensus 115 ~l~~Pv~i~~CgH~FC~~CI~~~l~~~~~~CP~CR~~~~ 153 (481)
++..|..+..||-.| . .-++ ....||.|+...-
T Consensus 63 L~v~Pp~CrkCGfvF-r----~~~k-kPSRCP~CKSE~I 95 (105)
T d2gmga1 63 LLIKPAQCRKCGFVF-K----AEIN-IPSRCPKCKSEWI 95 (105)
T ss_dssp EEECCCBBTTTCCBC-C----CCSS-CCSSCSSSCCCCB
T ss_pred EEEeChhhhhcCCee-c----ccCC-CCCCCCCCCCccc
Confidence 556666678999988 2 2233 4578999998543
No 35
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=39.53 E-value=3.7 Score=30.93 Aligned_cols=49 Identities=14% Similarity=0.375 Sum_probs=33.0
Q ss_pred Cccccccccccccc----ceecccCCCcccHHHHhhhhh-------cCCCCCCCcccccc
Q 011622 105 KDVQCPICLGIIKK----TRTVMECLHRFCRECIDKSMR-------LGNNECPACRTHCA 153 (481)
Q Consensus 105 ~~l~CpICl~~l~~----Pv~i~~CgH~FC~~CI~~~l~-------~~~~~CP~CR~~~~ 153 (481)
..+.|.||...... -+.+-.|...|+..|+...+. .....||.|.....
T Consensus 15 ~~~~C~iC~~~~~~~~~~~v~Cd~C~~~~H~~C~~p~~~~~~~~~~~~~W~C~~C~~~~~ 74 (88)
T d1weva_ 15 MGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMK 74 (88)
T ss_dssp HCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHC
T ss_pred CcCCccCCCCccCCCCCeEEEcCCCCCccccccCCCcccccccccCCCeEECcccCchHh
Confidence 35689999875442 233457889999999875432 12468999976443
No 36
>d1wd2a_ g.44.1.1 (A:) Ariadne-1 protein homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.24 E-value=4.2 Score=28.89 Aligned_cols=33 Identities=27% Similarity=0.609 Sum_probs=22.8
Q ss_pred ccccccccccccc-----eecc--cCCCcccHHHHhhhhh
Q 011622 107 VQCPICLGIIKKT-----RTVM--ECLHRFCRECIDKSMR 139 (481)
Q Consensus 107 l~CpICl~~l~~P-----v~i~--~CgH~FC~~CI~~~l~ 139 (481)
-.||-|...+..- ++.+ .|++.||..|...|-.
T Consensus 7 K~CP~C~~~ieK~~GCnhM~C~~~~C~~~fCw~C~~~~~~ 46 (60)
T d1wd2a_ 7 KECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEP 46 (60)
T ss_dssp CCCTTTCCCCSSCCSCCSSSCCSSGGGSCCSSSSCSCSGG
T ss_pred cCCCCCCCeEEECCCCCCeEeCCCCCCCeEECCCCCcccc
Confidence 4699999877642 3333 3788888888777654
No 37
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.61 E-value=7 Score=28.20 Aligned_cols=45 Identities=16% Similarity=0.341 Sum_probs=30.5
Q ss_pred ccccccccccccceecccCCCcccHHHHhhhhh---cCCCCCCCccccc
Q 011622 107 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMR---LGNNECPACRTHC 152 (481)
Q Consensus 107 l~CpICl~~l~~Pv~i~~CgH~FC~~CI~~~l~---~~~~~CP~CR~~~ 152 (481)
..|.+|..- .+-+..-.|...|+..|+...+. .+...||.|+..-
T Consensus 8 ~~C~~C~~~-~~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~ 55 (70)
T d1fp0a1 8 TICRVCQKP-GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 55 (70)
T ss_dssp SCCSSSCSS-SCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCC
T ss_pred CCCCCCCCc-CEEEECCCCChhhccccCCCCcCcCCCCCEECcCCcCcC
Confidence 457777643 12234457999999999987664 2346899997643
No 38
>d2e74h1 f.23.27.1 (H:3-29) PetN subunit of the cytochrome b6f complex {Mastigocladus laminosus [TaxId: 83541]}
Probab=37.38 E-value=2.1 Score=25.17 Aligned_cols=12 Identities=50% Similarity=1.420 Sum_probs=9.8
Q ss_pred cCcchhhccCCC
Q 011622 324 WNPEMLAWGRGG 335 (481)
Q Consensus 324 ~~~~~~~~g~~g 335 (481)
|.--|.+||+||
T Consensus 15 wsiamvvwgrng 26 (27)
T d2e74h1 15 WSIAMVVWGRNG 26 (27)
T ss_dssp HHHHHHHHHTTC
T ss_pred heeeeEEEccCC
Confidence 556789999988
No 39
>d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.80 E-value=8.4 Score=27.37 Aligned_cols=33 Identities=24% Similarity=0.508 Sum_probs=23.7
Q ss_pred cccccccccccc---cceecccCCCcccHHHHhhhh
Q 011622 106 DVQCPICLGIIK---KTRTVMECLHRFCRECIDKSM 138 (481)
Q Consensus 106 ~l~CpICl~~l~---~Pv~i~~CgH~FC~~CI~~~l 138 (481)
...|.+|...|. .....-.||+.||..|.....
T Consensus 8 ~~~C~~C~~~F~~~~rrHHCR~CG~v~C~~Cs~~~~ 43 (64)
T d1joca1 8 VQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKNA 43 (64)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEEE
T ss_pred CCcCcCcCCcccCCccccchhhhCCeecccccCCce
Confidence 346999987664 334456799999999976543
No 40
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.29 E-value=9.3 Score=26.65 Aligned_cols=43 Identities=19% Similarity=0.472 Sum_probs=29.0
Q ss_pred cccccccccccceecccCCCcccHHHHhhhhh---cCCCCCCCcccc
Q 011622 108 QCPICLGIIKKTRTVMECLHRFCRECIDKSMR---LGNNECPACRTH 151 (481)
Q Consensus 108 ~CpICl~~l~~Pv~i~~CgH~FC~~CI~~~l~---~~~~~CP~CR~~ 151 (481)
.|.+|.+-= .-+..-.|.-.|+..|+...+. .....||.|+..
T Consensus 11 ~C~~C~~~g-~lv~Cd~C~~~~H~~C~~~~~~~~~~~~W~C~~C~~~ 56 (61)
T d1mm2a_ 11 FCRVCKDGG-ELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCP 56 (61)
T ss_dssp SCTTTCCCS-SCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTT
T ss_pred CCcCCCCCC-eEEEeCCCCccCchhhcCCCcCcCCCCcEECCCCcCc
Confidence 599998631 2233356888999999876554 235689999753
No 41
>d1ibia2 g.39.1.3 (A:145-175) Cysteine-rich (intestinal) protein, CRP, CRIP {Japanese quail (Coturnix coturnix japonica), CRP2 [TaxId: 93934]}
Probab=32.59 E-value=6.2 Score=24.01 Aligned_cols=29 Identities=17% Similarity=0.454 Sum_probs=21.4
Q ss_pred ccccccccccccceecccCCCcccHHHHh
Q 011622 107 VQCPICLGIIKKTRTVMECLHRFCRECID 135 (481)
Q Consensus 107 l~CpICl~~l~~Pv~i~~CgH~FC~~CI~ 135 (481)
+.|+.|..-+......-.=|.+||..|..
T Consensus 1 frca~cgk~lestt~adkdgeiyck~cya 29 (31)
T d1ibia2 1 FRCAKCGKSLESTTLTEKEGEIYCKGCYA 29 (31)
T ss_dssp EECSSSCCEECSSCSEEETTEEECHHHHH
T ss_pred CccccccCccccceeeccCCcEEEeeeee
Confidence 46999988777654335578899999964
No 42
>d1z2ma2 d.15.1.1 (A:79-154) Interferon-induced 15 kDa protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.11 E-value=19 Score=25.77 Aligned_cols=48 Identities=13% Similarity=0.117 Sum_probs=36.9
Q ss_pred cccceeEEEEeecCCCCCCCCCCCcccccCcchHHHHHHHhHhccCCcccceEEEE
Q 011622 372 NDELDVRLMLVSADTQCAPSLQQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILM 427 (481)
Q Consensus 372 ~~e~~~~l~l~~~d~~~~p~l~~p~l~c~p~~~~~~l~~~va~q~~~~~~e~e~~~ 427 (481)
|+.+.|+++ .+++++++ |.+.|+-||.+|-+.|+.+++.+++..=++.
T Consensus 1 d~~~qi~Vk--~~~G~~~~------l~v~~~~tV~~lK~~I~~~~gi~~~~qrL~~ 48 (76)
T d1z2ma2 1 DEPLSILVR--NNKGRSST------YEVRLTQTVAHLKQQVSGLEGVQDDLFWLTF 48 (76)
T ss_dssp CCCEEEEEE--CTTSCEEE------EEECTTSBHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred CCCEEEEEE--cCCCCEEE------EEECCCCcHHHHHHHHHHHhcCChhHeEEEE
Confidence 345556653 45566554 6788999999999999999999998877665
No 43
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.47 E-value=6.9 Score=23.87 Aligned_cols=11 Identities=36% Similarity=0.781 Sum_probs=5.8
Q ss_pred ccccccccccc
Q 011622 107 VQCPICLGIIK 117 (481)
Q Consensus 107 l~CpICl~~l~ 117 (481)
+.||||...|.
T Consensus 4 ~~cpic~qrfk 14 (32)
T d2epqa1 4 YSCPVCGLRFK 14 (32)
T ss_dssp SEETTTTEECS
T ss_pred cccchHHHHhh
Confidence 45555555544
No 44
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=30.40 E-value=7.5 Score=27.29 Aligned_cols=46 Identities=20% Similarity=0.445 Sum_probs=31.6
Q ss_pred cccccccccccccc---eecccCCCcccHHHHhhhhh----cCCCCCCCcccc
Q 011622 106 DVQCPICLGIIKKT---RTVMECLHRFCRECIDKSMR----LGNNECPACRTH 151 (481)
Q Consensus 106 ~l~CpICl~~l~~P---v~i~~CgH~FC~~CI~~~l~----~~~~~CP~CR~~ 151 (481)
...|.||......- |..-.|+.-|+..|+..-.. .....||.|+..
T Consensus 6 ~~~C~~C~~~~~~~~~~I~Cd~C~~w~H~~C~~~~~~~~~~~~~w~C~~C~~~ 58 (64)
T d1we9a_ 6 SGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp CCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCcCcCcCCCCCCCCCEEEcCCCCccCCcccCCcChHHCCCCCeEECcCCcCc
Confidence 45799998765432 44567999999999853221 134689999763
No 45
>d2fiya1 e.59.1.1 (A:19-308) FdhE homolog PA4809 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=30.24 E-value=7.7 Score=35.97 Aligned_cols=46 Identities=17% Similarity=0.226 Sum_probs=30.7
Q ss_pred Ccccccccccccccceecc---cCC--CcccHHHHhhhhhcCCCCCCCcccc
Q 011622 105 KDVQCPICLGIIKKTRTVM---ECL--HRFCRECIDKSMRLGNNECPACRTH 151 (481)
Q Consensus 105 ~~l~CpICl~~l~~Pv~i~---~Cg--H~FC~~CI~~~l~~~~~~CP~CR~~ 151 (481)
..-.||||.....-.+..- .=| |.+|..|-..|-- ....||.|...
T Consensus 163 ~~~~CPvCGs~P~~s~l~~~~~~~G~R~l~C~~C~teW~~-~R~~C~~Cg~~ 213 (290)
T d2fiya1 163 SRTLCPACGSPPMAGMIRQGGKETGLRYLSCSLCACEWHY-VRIKCSHCEES 213 (290)
T ss_dssp TCSSCTTTCCCEEEEEEEC----CCEEEEEETTTCCEEEC-CTTSCSSSCCC
T ss_pred cCCcCCCCCCcchhheeeccCCCCCceEEECCCCCCcccc-ccccCCCCCCC
Confidence 4467999998765443210 123 5579999999855 44789999753
No 46
>d1we6a_ d.15.1.1 (A:) Splicing factor 3 subunit 1, C-terminal domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=29.70 E-value=17 Score=28.61 Aligned_cols=72 Identities=19% Similarity=0.197 Sum_probs=44.7
Q ss_pred CCCCCCCccchhHHHHHHHHHhhhcccccceeEEEEe-ecCCCCCCCCCCCcccccC-cchHHHHHHHhHhccCCcccce
Q 011622 346 SGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLV-SADTQCAPSLQQPYLCCQP-SLSVKQLCEYVSLQTPLQAEEV 423 (481)
Q Consensus 346 ~~~~~~~~~~~~~~k~~~~l~~~~~~~~e~~~~l~l~-~~d~~~~p~l~~p~l~c~p-~~~~~~l~~~va~q~~~~~~e~ 423 (481)
+|+.+|..-+.=+.. .++|.+.. ....|++.+= ..|+++++ |...| |-||..|-+-|+.+++++++..
T Consensus 3 ~~~~~k~~~~~L~pE-~~~l~~~~---g~~ti~V~v~~~~~G~~i~------l~v~~~sdtV~~lK~~I~~~~gip~~~Q 72 (111)
T d1we6a_ 3 SGSSGKFDESALVPE-DQFLAQHP---GPATIRVSKPNENDGQFME------ITVQSLSENVGSLKEKIAGEIQIPANKQ 72 (111)
T ss_dssp CCCCCSCCGGGCCCH-HHHHHHCC---SCEEEEECCTTCSSSCCEE------EEESCSSSBHHHHHHHHHHHTTCCTTTS
T ss_pred CCccccccccccCCH-HHHHhhCC---CCEEEEEEcccCCCCeEEE------EEecCCccHHHHHHHHHHHHHCCCccce
Confidence 355566655544433 56666542 2233333111 12455554 66777 8999999999999999998887
Q ss_pred EEEE
Q 011622 424 EILM 427 (481)
Q Consensus 424 e~~~ 427 (481)
=|+.
T Consensus 73 rLi~ 76 (111)
T d1we6a_ 73 KLSG 76 (111)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 6553
No 47
>d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=27.44 E-value=21 Score=25.79 Aligned_cols=44 Identities=23% Similarity=0.609 Sum_probs=26.1
Q ss_pred ccccccccccccceeccc---C-CCcccHHHHhhhhh-cCCCCCCCcccc
Q 011622 107 VQCPICLGIIKKTRTVME---C-LHRFCRECIDKSMR-LGNNECPACRTH 151 (481)
Q Consensus 107 l~CpICl~~l~~Pv~i~~---C-gH~FC~~CI~~~l~-~~~~~CP~CR~~ 151 (481)
..| ||.......+.... | ..-|+..|+.--.. .....||.|+..
T Consensus 17 ~~C-iC~~~~~~~~i~c~~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~ 65 (71)
T d1wesa_ 17 TYC-LCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCRGD 65 (71)
T ss_dssp CCS-TTCCCCCSSEECCSCTTCSCCCEETTTTTCSSCCSSCCCCTTTSSC
T ss_pred CEE-EeCCCCCCCEEEEECCCCCCcCccCccCCCCcCCCCcEECcCCccc
Confidence 456 99876544432232 3 34589999842111 245789999763
No 48
>d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.72 E-value=15 Score=27.70 Aligned_cols=34 Identities=24% Similarity=0.478 Sum_probs=25.3
Q ss_pred cccccccccccc---cceecccCCCcccHHHHhhhhh
Q 011622 106 DVQCPICLGIIK---KTRTVMECLHRFCRECIDKSMR 139 (481)
Q Consensus 106 ~l~CpICl~~l~---~Pv~i~~CgH~FC~~CI~~~l~ 139 (481)
.-.|.+|...|. ....+-.||-+||..|...++.
T Consensus 9 ~s~C~~C~~~Fs~~~rrhhCr~CG~vfC~~Cs~~~~~ 45 (88)
T d1wfka_ 9 ESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSFSAL 45 (88)
T ss_dssp CSBCTTTCCBCCSSSCEEECSSSCCEEETTTSCEEEE
T ss_pred cCcCcccCchhccccccccccccChhhChHHhCCccc
Confidence 446999987654 4455678999999999876543
No 49
>d1m94a_ d.15.1.1 (A:) Ubiquitin-like modifier protein hub1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.43 E-value=28 Score=24.73 Aligned_cols=31 Identities=23% Similarity=0.253 Sum_probs=27.6
Q ss_pred ccccCcchHHHHHHHhHhccCCcccceEEEE
Q 011622 397 LCCQPSLSVKQLCEYVSLQTPLQAEEVEILM 427 (481)
Q Consensus 397 l~c~p~~~~~~l~~~va~q~~~~~~e~e~~~ 427 (481)
+.+.|+-||..|-+.||.+++++++..-|+.
T Consensus 16 v~V~~~~tV~~lK~~I~~~~~i~~~~q~Li~ 46 (73)
T d1m94a_ 16 VKCLAEDSVGDFKKVLSLQIGTQPNKIVLQK 46 (73)
T ss_dssp EEECTTSBHHHHHHHHHHHHCCTTTSEEEES
T ss_pred EEECCcCcHHHHHHHHHHhhcccccEEEEEE
Confidence 6788999999999999999999998876653
No 50
>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=22.09 E-value=15 Score=26.82 Aligned_cols=45 Identities=20% Similarity=0.409 Sum_probs=28.1
Q ss_pred cccccccccccccc--eecc--cCCCcccHHHHhhh---hh-----cCCCCCCCcccc
Q 011622 106 DVQCPICLGIIKKT--RTVM--ECLHRFCRECIDKS---MR-----LGNNECPACRTH 151 (481)
Q Consensus 106 ~l~CpICl~~l~~P--v~i~--~CgH~FC~~CI~~~---l~-----~~~~~CP~CR~~ 151 (481)
...| ||....... +.+- .|..-|+..|+.-- +. .....||.|+..
T Consensus 16 ~~~C-~C~~~~~~~~~i~c~c~~C~~W~H~~Cvgi~~~~~~~~~~~~~~~~C~~C~~~ 72 (78)
T d1wewa_ 16 KVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLT 72 (78)
T ss_dssp CCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHC
T ss_pred ccEe-ECCCccCCCcEEEEeCCCCCcCCCccccCccccccccccCCCCEEECCCCcCc
Confidence 4568 898866542 3322 38889999998321 11 123789999763
No 51
>d1wfpa_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At1g12440 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=21.51 E-value=47 Score=24.28 Aligned_cols=41 Identities=20% Similarity=0.293 Sum_probs=26.4
Q ss_pred cccccccccccccceecccCCCcccHHHHhhhhhcCCCCCCCccc
Q 011622 106 DVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRT 150 (481)
Q Consensus 106 ~l~CpICl~~l~~Pv~i~~CgH~FC~~CI~~~l~~~~~~CP~CR~ 150 (481)
...|.+|..-+.-..+.-.|++.||...... ..-.|+.--+
T Consensus 25 k~RC~~C~KKl~l~~~~CrCg~~FC~~HR~p----e~H~C~fDyK 65 (74)
T d1wfpa_ 25 ATRCLSCNKKVGVTGFKCRCGSTFCGTHRYP----ESHECQFDFK 65 (74)
T ss_dssp CCBCSSSCCBCTTTCEECTTSCEECTTTCST----TTSCCCSCTT
T ss_pred CCcChhcCCccCCCceecCCCChhhhccCCc----cCcCCCCcch
Confidence 5689999876554333367999999976432 2345665433
No 52
>d1lkoa2 g.41.5.1 (A:148-191) Rubrerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}
Probab=21.11 E-value=13 Score=24.79 Aligned_cols=24 Identities=25% Similarity=0.304 Sum_probs=15.2
Q ss_pred ccCCCcccHHHHhhhhhcCCCCCCCcccccc
Q 011622 123 MECLHRFCRECIDKSMRLGNNECPACRTHCA 153 (481)
Q Consensus 123 ~~CgH~FC~~CI~~~l~~~~~~CP~CR~~~~ 153 (481)
+.|||++-.. .....||+|..+-.
T Consensus 12 ~~CGyi~~g~-------~aP~~CPvC~~p~~ 35 (44)
T d1lkoa2 12 RNCGYVHEGT-------GAPELCPACAHPKA 35 (44)
T ss_dssp TTTCCEEEEE-------ECCSBCTTTCCBGG
T ss_pred CCCCcEEECC-------CCCCcCCCCCCcHH
Confidence 5677765442 13468999987543
No 53
>d2zeqa1 d.15.1.1 (A:1-78) Ubiquitin-like domain of parkin {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.82 E-value=30 Score=24.96 Aligned_cols=31 Identities=19% Similarity=0.317 Sum_probs=27.3
Q ss_pred ccccCcchHHHHHHHhHhccCCcccceEEEE
Q 011622 397 LCCQPSLSVKQLCEYVSLQTPLQAEEVEILM 427 (481)
Q Consensus 397 l~c~p~~~~~~l~~~va~q~~~~~~e~e~~~ 427 (481)
|-..|+-||..|-+.|+.++++++++.-|+.
T Consensus 17 l~v~~~~tV~~lK~~i~~~~gip~~~qrLi~ 47 (78)
T d2zeqa1 17 VEVDSDTSILQLKEVVAKRQGVPADQLRVIF 47 (78)
T ss_dssp EEECTTCBHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred EEEcccccHHHHHHHHHHHHCcChhHeEEEE
Confidence 6778999999999999999999999876554
No 54
>d1wh3a_ d.15.1.1 (A:) 2'-5'-oligoadenylate synthetase-like protein, OASL {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.31 E-value=44 Score=24.38 Aligned_cols=47 Identities=13% Similarity=0.140 Sum_probs=37.3
Q ss_pred ccceeEEEEeecCCCCCCCCCCCcccccCcchHHHHHHHhHhccCCcccceEEEE
Q 011622 373 DELDVRLMLVSADTQCAPSLQQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILM 427 (481)
Q Consensus 373 ~e~~~~l~l~~~d~~~~p~l~~p~l~c~p~~~~~~l~~~va~q~~~~~~e~e~~~ 427 (481)
..|.|+++ .+++++++ |.+.|+.||.+|-+.|+..+.+++++.=|+.
T Consensus 6 ~~mqI~Vk--~~~g~~~~------l~v~~~~tV~~lK~~I~~~~gip~~~qrLi~ 52 (87)
T d1wh3a_ 6 SGIQVFVK--NPDGGSYA------YAINPNSFILGLKQQIEDQQGLPKKQQQLEF 52 (87)
T ss_dssp SSEEEEEE--ETTTEEEE------EEECSSSBHHHHHHHHHHHTCCCTTTEEEEE
T ss_pred CcEEEEEE--CCCCCEEE------EEECCcCcHHHHHHHHHHHHCcChHHeEEEe
Confidence 35666665 45666653 6788999999999999999999999887665
No 55
>d1wfla_ g.80.1.1 (A:) Zinc finger A20 domain containing protein 2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.12 E-value=55 Score=23.89 Aligned_cols=28 Identities=18% Similarity=0.364 Sum_probs=20.3
Q ss_pred cccccccccccc-cceecccCCCcccHHHH
Q 011622 106 DVQCPICLGIIK-KTRTVMECLHRFCRECI 134 (481)
Q Consensus 106 ~l~CpICl~~l~-~Pv~i~~CgH~FC~~CI 134 (481)
...|.+|..-+. .++. -.||++||....
T Consensus 25 ~~RC~~C~KKl~l~~~~-CrCg~~FC~~HR 53 (74)
T d1wfla_ 25 KNRCFMCRKKVGLTGFD-CRCGNLFCGLHR 53 (74)
T ss_dssp TTBCSSSCCBCGGGCEE-CTTSCEECSSSC
T ss_pred CCcChhhCCcccceeeE-ccCCCEehhhcC
Confidence 468999986544 3555 579999998653
Done!