Your job contains 1 sequence.
>011624
MEAVQFSTVASRHYSATSKTFYNSRISAGKSAKFVSSWAASSDPARLSSTSRNLFTRETW
GLINSKSVTIRRNGRRRLIVRAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRA
LLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAK
SRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVP
VYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVL
LVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGER
MEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTR
TVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPGIFFFSIIIIGLTFK
R
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011624
(481 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2150620 - symbol:CPSRP54 "chloroplast signal r... 1801 1.0e-185 1
TIGR_CMR|CHY_1434 - symbol:CHY_1434 "signal recognition p... 1011 5.4e-102 1
TIGR_CMR|BA_3983 - symbol:BA_3983 "signal recognition par... 945 5.3e-95 1
UNIPROTKB|Q97QD2 - symbol:ffh "Signal recognition particl... 940 1.8e-94 1
UNIPROTKB|P0AGD7 - symbol:ffh species:83333 "Escherichia ... 924 9.0e-93 1
TIGR_CMR|CBU_0450 - symbol:CBU_0450 "signal recognition p... 917 5.0e-92 1
UNIPROTKB|P66844 - symbol:ffh "Signal recognition particl... 901 2.5e-90 1
TIGR_CMR|GSU_0642 - symbol:GSU_0642 "signal recognition p... 895 1.1e-89 1
TIGR_CMR|SO_1356 - symbol:SO_1356 "signal recognition par... 877 8.6e-88 1
TIGR_CMR|VC_0560 - symbol:VC_0560 "signal recognition par... 869 6.0e-87 1
TIGR_CMR|SPO_3246 - symbol:SPO_3246 "signal recognition p... 865 1.6e-86 1
TIGR_CMR|CPS_4073 - symbol:CPS_4073 "signal recognition p... 858 8.9e-86 1
UNIPROTKB|O07347 - symbol:ffh "Signal recognition particl... 819 1.2e-81 1
TIGR_CMR|ECH_0475 - symbol:ECH_0475 "signal recognition p... 812 6.6e-81 1
NCBI_NP|NP_355632.2 - symbol:ffh "signal recognition part... 805 3.7e-80 1
TIGR_CMR|APH_0349 - symbol:APH_0349 "signal recognition p... 787 3.0e-78 1
TIGR_CMR|NSE_0540 - symbol:NSE_0540 "signal recognition p... 714 1.6e-70 1
TIGR_CMR|CJE_0809 - symbol:CJE_0809 "signal recognition p... 699 6.3e-69 1
UNIPROTKB|Q2T9U1 - symbol:SRP54 "Signal recognition parti... 554 1.5e-53 1
UNIPROTKB|P61010 - symbol:SRP54 "Signal recognition parti... 554 1.5e-53 1
UNIPROTKB|P61011 - symbol:SRP54 "Signal recognition parti... 554 1.5e-53 1
UNIPROTKB|F2Z5M9 - symbol:SRP54 "Uncharacterized protein"... 554 1.5e-53 1
UNIPROTKB|Q4R965 - symbol:SRP54 "Signal recognition parti... 554 1.5e-53 1
UNIPROTKB|Q5R4R6 - symbol:SRP54 "Signal recognition parti... 554 1.5e-53 1
UNIPROTKB|E1C6G6 - symbol:SRP54 "Uncharacterized protein"... 553 1.9e-53 1
RGD|2323636 - symbol:Fam177a1 "family with sequence simil... 551 3.0e-53 1
RGD|621390 - symbol:Srp54 "signal recognition particle 54... 551 3.0e-53 1
ZFIN|ZDB-GENE-040426-818 - symbol:srp54 "signal recogniti... 551 3.0e-53 1
SGD|S000006292 - symbol:SRP54 "Signal recognition particl... 550 3.8e-53 1
WB|WBGene00009012 - symbol:F21D5.7 species:6239 "Caenorha... 534 1.9e-51 1
TAIR|locus:2028563 - symbol:AT1G48900 species:3702 "Arabi... 530 5.1e-51 1
POMBASE|SPCC188.06c - symbol:srp54 "signal recognition pa... 528 8.3e-51 1
FB|FBgn0010747 - symbol:Srp54k "Signal recognition partic... 527 1.1e-50 1
GENEDB_PFALCIPARUM|PF14_0477 - symbol:PF14_0477 "signal r... 516 1.5e-49 1
UNIPROTKB|Q8IKX4 - symbol:PF14_0477 "Signal recognition p... 516 1.5e-49 1
UNIPROTKB|G3V4F7 - symbol:SRP54 "Signal recognition parti... 507 1.4e-48 1
DICTYBASE|DDB_G0275455 - symbol:srp54 "signal recognition... 505 2.3e-48 1
CGD|CAL0003314 - symbol:SRP54 species:5476 "Candida albic... 448 5.3e-47 2
TIGR_CMR|CHY_1442 - symbol:CHY_1442 "signal recognition p... 478 1.6e-45 1
TAIR|locus:2037803 - symbol:ATHSRP54A "signal recognition... 470 1.2e-44 1
TAIR|locus:2157809 - symbol:AT5G49500 "AT5G49500" species... 469 1.5e-44 1
TIGR_CMR|BA_3985 - symbol:BA_3985 "signal recognition par... 462 8.1e-44 1
UNIPROTKB|P10121 - symbol:ftsY "SRP receptor" species:833... 458 2.2e-43 1
TIGR_CMR|SPO_1339 - symbol:SPO_1339 "signal recognition p... 426 5.3e-40 1
TIGR_CMR|SO_4586 - symbol:SO_4586 "signal recognition par... 424 8.7e-40 1
TIGR_CMR|CPS_0157 - symbol:CPS_0157 "signal recognition p... 422 1.4e-39 1
TIGR_CMR|VC_0147 - symbol:VC_0147 "signal recognition par... 414 9.9e-39 1
TIGR_CMR|CBU_1903 - symbol:CBU_1903 "signal recognition p... 411 2.1e-38 1
TIGR_CMR|NSE_0545 - symbol:NSE_0545 "signal recognition p... 406 7.0e-38 1
UNIPROTKB|Q97QH0 - symbol:ftsY "Signal recognition partic... 405 8.9e-38 1
UNIPROTKB|P83749 - symbol:ftsY "Signal recognition partic... 398 4.9e-37 1
UNIPROTKB|P66842 - symbol:ftsY "Signal recognition partic... 385 1.2e-35 1
TIGR_CMR|GSU_1132 - symbol:GSU_1132 "signal recognition p... 381 3.1e-35 1
TIGR_CMR|ECH_1111 - symbol:ECH_1111 "signal recognition p... 358 8.5e-33 1
TIGR_CMR|APH_1227 - symbol:APH_1227 "signal recognition p... 346 1.6e-31 1
TIGR_CMR|CJE_1340 - symbol:CJE_1340 "signal recognition p... 319 1.2e-28 1
TAIR|locus:2118701 - symbol:AT4G30600 species:3702 "Arabi... 326 2.3e-27 1
WB|WBGene00009521 - symbol:F38A1.8 species:6239 "Caenorha... 298 5.7e-24 2
DICTYBASE|DDB_G0277377 - symbol:srpR "signal recognition ... 284 3.1e-22 1
FB|FBgn0010391 - symbol:Gtp-bp "GTP-binding protein" spec... 245 8.7e-18 1
MGI|MGI:1914648 - symbol:Srpr "signal recognition particl... 239 4.5e-17 1
RGD|1311504 - symbol:Srpr "signal recognition particle re... 239 4.5e-17 1
ZFIN|ZDB-GENE-030219-11 - symbol:srpr "signal recognition... 238 6.0e-17 1
UNIPROTKB|P08240 - symbol:SRPR "Signal recognition partic... 237 7.5e-17 1
UNIPROTKB|F1NXV4 - symbol:SRPR "Uncharacterized protein" ... 236 9.9e-17 1
UNIPROTKB|Q3V8C7 - symbol:flhF "Flagellar biogenesis prot... 232 1.1e-16 1
TIGR_CMR|GSU_3055 - symbol:GSU_3055 "flagellar biosynthet... 232 1.1e-16 1
UNIPROTKB|F1S754 - symbol:SRPR "Uncharacterized protein" ... 234 1.6e-16 1
UNIPROTKB|Q3MHE8 - symbol:SRPR "Signal recognition partic... 234 1.6e-16 1
UNIPROTKB|J9NTJ9 - symbol:SRPR "Signal recognition partic... 232 2.7e-16 1
UNIPROTKB|F1PLH3 - symbol:SRPR "Signal recognition partic... 232 2.7e-16 1
UNIPROTKB|J9P788 - symbol:SRPR "Signal recognition partic... 232 3.9e-16 1
ASPGD|ASPL0000006202 - symbol:AN6627 species:162425 "Emer... 230 4.5e-16 1
UNIPROTKB|P06625 - symbol:SRPR "Signal recognition partic... 226 1.3e-15 1
POMBASE|SPBC3B9.03 - symbol:SPBC3B9.03 "signal recognitio... 216 1.2e-14 1
CGD|CAL0003010 - symbol:orf19.3952 species:5476 "Candida ... 205 2.0e-13 1
UNIPROTKB|Q48GG0 - symbol:flhF "Flagellar biosynthesis pr... 194 2.2e-12 1
UNIPROTKB|Q81SE2 - symbol:BA_1718 "Putative flagellar bio... 183 4.0e-12 1
TIGR_CMR|BA_1718 - symbol:BA_1718 "flagellar biosynthetic... 183 4.0e-12 1
UNIPROTKB|Q8ECD1 - symbol:flhF "Flagellar polar localizat... 190 6.6e-12 1
TIGR_CMR|SO_3212 - symbol:SO_3212 "flagellar biosynthetic... 190 6.6e-12 1
SGD|S000002700 - symbol:SRP101 "Signal recognition partic... 142 2.3e-11 2
UNIPROTKB|F1MNJ2 - symbol:SRPR "Signal recognition partic... 183 6.6e-11 1
UNIPROTKB|Q722L6 - symbol:LMOf2365_0717 "Putative flagell... 175 2.4e-10 1
TIGR_CMR|CHY_1010 - symbol:CHY_1010 "flagellar biosynthes... 166 1.7e-09 1
UNIPROTKB|Q9KQD2 - symbol:VC_2068 "Flagellar biosynthetic... 166 3.6e-09 1
TIGR_CMR|VC_2068 - symbol:VC_2068 "flagellar biosynthetic... 166 3.6e-09 1
TIGR_CMR|CJE_0061 - symbol:CJE_0061 "flagellar biosynthet... 161 1.2e-08 1
UNIPROTKB|Q485K6 - symbol:flhF "Flagellar biosynthetic pr... 161 1.4e-08 1
TIGR_CMR|CPS_1517 - symbol:CPS_1517 "flagellar biosynthet... 161 1.4e-08 1
TAIR|locus:2158103 - symbol:AT5G66970 species:3702 "Arabi... 112 0.00021 1
>TAIR|locus:2150620 [details] [associations]
symbol:CPSRP54 "chloroplast signal recognition particle
54 kDa subunit" species:3702 "Arabidopsis thaliana" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0005048 "signal sequence binding" evidence=IDA]
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005786 "signal recognition particle, endoplasmic
reticulum targeting" evidence=ISS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0006617 "SRP-dependent cotranslational protein targeting to
membrane, signal sequence recognition" evidence=ISS] [GO:0008312
"7S RNA binding" evidence=IEA;ISS] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0045038 "protein import into chloroplast
thylakoid membrane" evidence=IDA] [GO:0048500 "signal recognition
particle" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0080085 "signal recognition particle, chloroplast targeting"
evidence=IMP] [GO:0009507 "chloroplast" evidence=IDA] [GO:0010267
"production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0019288 "isopentenyl diphosphate biosynthetic
process, mevalonate-independent pathway" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0051607 "defense response to virus" evidence=RCA]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR004780 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009570 GO:GO:0003924
GO:GO:0006184 EMBL:AL162873 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 PDB:2HUG PDB:3UI2 PDBsum:2HUG
PDBsum:3UI2 TCDB:3.A.5.1.2 GO:GO:0080085 eggNOG:COG0541 KO:K03106
Gene3D:1.10.260.30 SUPFAM:SSF47446 EMBL:Z21970 EMBL:AF092168
EMBL:AY050999 EMBL:BT000976 IPI:IPI00538977 PIR:S36637
RefSeq:NP_196014.1 UniGene:At.435 ProteinModelPortal:P37107
SMR:P37107 DIP:DIP-752N IntAct:P37107 MINT:MINT-126488
STRING:P37107 PaxDb:P37107 PRIDE:P37107 ProMEX:P37107
EnsemblPlants:AT5G03940.1 GeneID:830273 KEGG:ath:AT5G03940
GeneFarm:1888 TAIR:At5g03940 HOGENOM:HOG000036164 InParanoid:P37107
OMA:DSGKTEQ PhylomeDB:P37107 ProtClustDB:CLSN2686225
EvolutionaryTrace:P37107 Genevestigator:P37107 GermOnline:AT5G03940
PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959 Uniprot:P37107
Length = 564
Score = 1801 (639.0 bits), Expect = 1.0e-185, P = 1.0e-185
Identities = 372/465 (80%), Positives = 403/465 (86%)
Query: 1 MEAVQFSTVASRHYSATSKTFYNSRISAGKSAKFVSSWAASSDPARLSSTSRNLFTRETW 60
MEA+QFS+V T N RI A S+ F S A LSS SRNL TRE W
Sbjct: 1 MEALQFSSV--NRVPCTLSCTGNRRIKAAFSSAFTGGTINS---ASLSS-SRNLSTREIW 54
Query: 61 GLINSKSVTIXXXXXXXXXXXAEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRA 120
+ SK+V + AEMFGQLT GLEAAW+KLKGEE LTK+NI EPMRDIRRA
Sbjct: 55 SWVKSKTV-VGHGRYRRSQVRAEMFGQLTGGLEAAWSKLKGEEVLTKDNIAEPMRDIRRA 113
Query: 121 LLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAK 180
LLEADVSLPVVRRFVQ+VS+QAVG+G+IRGV+PDQQLVKIV DELVKLMGGEVSEL FAK
Sbjct: 114 LLEADVSLPVVRRFVQSVSDQAVGMGVIRGVKPDQQLVKIVHDELVKLMGGEVSELQFAK 173
Query: 181 SRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVP 240
S PTVILLAGLQGVGKTTV AKLA YLKKQGKSCML+AGDVYRPAAIDQLVILGEQVGVP
Sbjct: 174 SGPTVILLAGLQGVGKTTVCAKLACYLKKQGKSCMLIAGDVYRPAAIDQLVILGEQVGVP 233
Query: 241 VYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVL 300
VYTAGT+VKP+ IAKQGL+EAKK NVDVVI+DTAGRLQIDK MMDELKDVK+ LNPTEVL
Sbjct: 234 VYTAGTDVKPADIAKQGLKEAKKNNVDVVIMDTAGRLQIDKGMMDELKDVKKFLNPTEVL 293
Query: 301 LVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGER 360
LVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGER
Sbjct: 294 LVVDAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGER 353
Query: 361 MEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTR 420
MEDLEPFYPDRMAGRILGMGDVLSFVEKA EVM+QEDAE++QKKIMSA FDFNDFLKQTR
Sbjct: 354 MEDLEPFYPDRMAGRILGMGDVLSFVEKATEVMRQEDAEDLQKKIMSAKFDFNDFLKQTR 413
Query: 421 TVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTP 465
VA+MGSM+RV+GMIPGMGK++PAQ+REAEK+L +MEAMIE MTP
Sbjct: 414 AVAKMGSMTRVLGMIPGMGKVSPAQIREAEKNLLVMEAMIEVMTP 458
>TIGR_CMR|CHY_1434 [details] [associations]
symbol:CHY_1434 "signal recognition particle protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0005048 "signal
sequence binding" evidence=ISS] [GO:0009306 "protein secretion"
evidence=ISS] [GO:0048501 "signal recognition particle, plasma
membrane targeting" evidence=ISS] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR004780
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0003924 GO:GO:0006184 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 eggNOG:COG0541 HOGENOM:HOG000036165
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 PANTHER:PTHR11564:SF7
TIGRFAMs:TIGR00959 OMA:GQQVVKI RefSeq:YP_360266.1
ProteinModelPortal:Q3AC68 SMR:Q3AC68 STRING:Q3AC68 GeneID:3728502
KEGG:chy:CHY_1434 PATRIC:21275999
BioCyc:CHYD246194:GJCN-1433-MONOMER Uniprot:Q3AC68
Length = 446
Score = 1011 (360.9 bits), Expect = 5.4e-102, P = 5.4e-102
Identities = 204/382 (53%), Positives = 277/382 (72%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L++ L+ + KLKG+ LT+E++ +R++R ALLEADV+ VV+ F+ V E+AV
Sbjct: 2 VFENLSNKLQEVFKKLKGKGRLTEEDVNLALREVRIALLEADVNFQVVKDFIAKVKEKAV 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P QQ++KIV +EL+ LMG ++L A S PT+I+L GLQG GKTT +AKL
Sbjct: 62 GHEVLESLTPGQQVIKIVHEELINLMGKTNAKLNDAGSPPTIIMLVGLQGAGKTTTAAKL 121
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A LKKQGK +LVA DVYRPAAI QL +LG+ + VPV+T G E P IAK + AK
Sbjct: 122 AYLLKKQGKKPLLVAADVYRPAAIKQLQVLGDTIDVPVFTMG-EQSPVDIAKASINFAKS 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ VI+DTAGRL I++ +MDELK +K V++P E+LLVVDAMTGQ+A + +FN E+G
Sbjct: 181 NLKNYVIIDTAGRLHINEELMDELKKIKDVVHPHEILLVVDAMTGQDAVNVAKSFNDELG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTKLDGD++GGAALSVK V+G PIK G GE++E+LEPFYPDRMA RILGMGDVL
Sbjct: 241 LTGVILTKLDGDTKGGAALSVKAVTGCPIKFAGMGEKIENLEPFYPDRMASRILGMGDVL 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA+E + E A++MQ+K+ S FD DFL + + +MG + +++GMIPGMGK+
Sbjct: 301 TLIEKAKEALDAEKAQKMQEKLKSREFDLEDFLDSMQQIKKMGPLEQLLGMIPGMGKVKD 360
Query: 444 AQVREAEKSLKIMEAMIEAMTP 465
EK LK +EA+I +MTP
Sbjct: 361 IAGMVDEKELKHIEAIIYSMTP 382
>TIGR_CMR|BA_3983 [details] [associations]
symbol:BA_3983 "signal recognition particle protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0009306 "protein secretion" evidence=ISS]
[GO:0048501 "signal recognition particle, plasma membrane
targeting" evidence=ISS] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR004780
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003924 GO:GO:0006184 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786 KO:K03106
Gene3D:1.10.260.30 SUPFAM:SSF47446 HOGENOM:HOG000036164
PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959 OMA:GQQVVKI
ProtClustDB:PRK10867 RefSeq:NP_846225.1 RefSeq:YP_020622.1
RefSeq:YP_029947.1 HSSP:O07347 ProteinModelPortal:Q81WJ2 SMR:Q81WJ2
EnsemblBacteria:EBBACT00000009811 EnsemblBacteria:EBBACT00000016655
EnsemblBacteria:EBBACT00000023730 GeneID:1087538 GeneID:2820002
GeneID:2848277 KEGG:ban:BA_3983 KEGG:bar:GBAA_3983 KEGG:bat:BAS3696
BioCyc:BANT260799:GJAJ-3754-MONOMER
BioCyc:BANT261594:GJ7F-3871-MONOMER Uniprot:Q81WJ2
Length = 449
Score = 945 (337.7 bits), Expect = 5.3e-95, P = 5.3e-95
Identities = 184/382 (48%), Positives = 273/382 (71%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F L L+ K++G+ +++ ++ E MR++R ALLEADV+ VV+ FV+ VSE+AVG
Sbjct: 3 FEGLADRLQQTMQKIRGKGKVSEADVKEMMREVRLALLEADVNFKVVKDFVKRVSERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+++ + P QQ++K+V++EL +LMGGE S++ A PTVI++ GLQG GKTT + KLA
Sbjct: 63 QDVMKSLTPGQQVIKVVQEELTELMGGEQSKIAIANKPPTVIMMVGLQGAGKTTTTGKLA 122
Query: 205 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N L KK + MLVA D+YRPAAI QL LG+Q+ +PV++ G +V P +IAKQ + +AK+
Sbjct: 123 NLLRKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKE 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAG L ID+ +MDEL VK V P E+ LVVDAMTGQ+A + +F+ ++G
Sbjct: 183 DHHDYVLIDTAGHLHIDEELMDELAKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLG 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS+K V+ PIK G GE+++ LE F+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIKAVTNTPIKFAGMGEKLDALEAFHPERMASRILGMGDVL 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKAQ + +E A+E+++K+ + +F +DFL+Q V ++G + ++GM+PG KI
Sbjct: 303 TLIEKAQATVDEEKAKELEQKMRTLSFTLDDFLEQLGQVRQLGPLDELLGMLPGANKIKG 362
Query: 444 AQVREA-EKSLKIMEAMIEAMT 464
+ + EK + +EA+I +MT
Sbjct: 363 LKNAQVDEKQIGHIEAIIRSMT 384
>UNIPROTKB|Q97QD2 [details] [associations]
symbol:ffh "Signal recognition particle protein"
species:170187 "Streptococcus pneumoniae TIGR4" [GO:0005515
"protein binding" evidence=IPI] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR004780
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0003924 GO:GO:0006184
EMBL:AE005672 GenomeReviews:AE005672_GR GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7
TIGRFAMs:TIGR00959 OMA:GQQVVKI ProtClustDB:PRK10867 HSSP:O07347
PIR:F95149 RefSeq:NP_345751.1 ProteinModelPortal:Q97QD2
EnsemblBacteria:EBSTRT00000025249 GeneID:931801 KEGG:spn:SP_1287
PATRIC:19706973 Uniprot:Q97QD2
Length = 523
Score = 940 (336.0 bits), Expect = 1.8e-94, P = 1.8e-94
Identities = 184/384 (47%), Positives = 270/384 (70%)
Query: 85 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG 144
F LT L+ + L+ + +++ ++ E ++IR ALLEADV+LPVV+ F++ V E+AVG
Sbjct: 3 FESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVG 62
Query: 145 VGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA 204
+I + P QQ++KIV +EL ++G + +E++ + PT+I++ GLQG GKTT + KLA
Sbjct: 63 HEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLA 122
Query: 205 NYLKKQGKSC-MLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
N LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV+ GTEV +I +QGLE+A+
Sbjct: 123 NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQT 182
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D V++DTAGRLQID+ +M+EL+DVK + P E+LLVVDAM GQEAA + FN ++
Sbjct: 183 NHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE 242
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDML 302
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ +EKA + ++ A EM +K+ FDFNDF+ Q V MG M ++ MIPGM P
Sbjct: 303 TLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMAN-NP 361
Query: 444 A--QVREAEKSLKIMEAMIEAMTP 465
A ++ E+ + A++ +MTP
Sbjct: 362 ALQNMKVDERQIARKRAIVSSMTP 385
>UNIPROTKB|P0AGD7 [details] [associations]
symbol:ffh species:83333 "Escherichia coli K-12"
[GO:0048500 "signal recognition particle" evidence=IEA;IMP]
[GO:0005525 "GTP binding" evidence=IEA;ISS;IMP;IDA] [GO:0006612
"protein targeting to membrane" evidence=IMP] [GO:0030529
"ribonucleoprotein complex" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISS;IMP;IDA] [GO:0008312 "7S RNA binding"
evidence=IEA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=IEA] [GO:0006184 "GTP catabolic process" evidence=IEA;IMP]
[GO:0003723 "RNA binding" evidence=IEA] HAMAP:MF_00306
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR004780 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0006612 GO:GO:0003924 GO:GO:0008312 PDB:2XXA PDBsum:2XXA
TCDB:3.A.5.1.1 GO:GO:0006614 SUPFAM:SSF47364 PDB:2XKV PDBsum:2XKV
EMBL:X01818 PDB:2J28 PDBsum:2J28 GO:GO:0005786 eggNOG:COG0541
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 HOGENOM:HOG000036164
PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959 OMA:GQQVVKI PIR:E65039
RefSeq:NP_417101.1 RefSeq:YP_490833.1 PDB:1DUL PDB:1HQ1 PDB:2PXB
PDB:2PXD PDB:2PXE PDB:2PXF PDB:2PXK PDB:2PXL PDB:2PXP PDB:2PXQ
PDB:2PXT PDB:2PXU PDB:2PXV PDB:3LQX PDBsum:1DUL PDBsum:1HQ1
PDBsum:2PXB PDBsum:2PXD PDBsum:2PXE PDBsum:2PXF PDBsum:2PXK
PDBsum:2PXL PDBsum:2PXP PDBsum:2PXQ PDBsum:2PXT PDBsum:2PXU
PDBsum:2PXV PDBsum:3LQX ProteinModelPortal:P0AGD7 SMR:P0AGD7
DIP:DIP-31865N IntAct:P0AGD7 MINT:MINT-1218614 PRIDE:P0AGD7
EnsemblBacteria:EBESCT00000004690 EnsemblBacteria:EBESCT00000014850
GeneID:12933092 GeneID:947102 KEGG:ecj:Y75_p2558 KEGG:eco:b2610
PATRIC:32120619 EchoBASE:EB0296 EcoGene:EG10300
ProtClustDB:PRK10867 BioCyc:EcoCyc:EG10300-MONOMER
BioCyc:ECOL316407:JW5414-MONOMER EvolutionaryTrace:P0AGD7
Genevestigator:P0AGD7 GO:GO:0048500 Uniprot:P0AGD7
Length = 453
Score = 924 (330.3 bits), Expect = 9.0e-93, P = 9.0e-93
Identities = 192/385 (49%), Positives = 257/385 (66%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF LT L + G LT++N+ + +R++R ALLEADV+LPVVR F+ V E+AV
Sbjct: 1 MFDNLTDRLSRTLRNISGRGRLTEDNVKDTLREVRMALLEADVALPVVREFINRVKEKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G + + + P Q+ VKIVR+ELV MG E L A P V+L+AGLQG GKTT KL
Sbjct: 61 GHEVNKSLTPGQEFVKIVRNELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKL 120
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
+L+ K K ++V+ DVYRPAAI QL L EQVGV + + KP I L+EAK
Sbjct: 121 GKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAK 180
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K DV++VDTAGRL +D+AMMDE+K V +NP E L VVDAMTGQ+AA FN +
Sbjct: 181 LKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEAL 240
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
+TG +LTK+DGD+RGGAALS++ ++GKPIK +G GE+ E LEPF+PDR+A RILGMGDV
Sbjct: 241 PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRILGMGDV 300
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSAN-FDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI 441
LS +E + + + AE++ K+ + FD NDFL+Q R + MG M+ ++G +PGMG+I
Sbjct: 301 LSLIEDIESKVDRAQAEKLASKLKKGDGFDLNDFLEQLRQMKNMGGMASLMGKLPGMGQI 360
Query: 442 TPAQVREA--EKSLKIMEAMIEAMT 464
P V+ +K L MEA+I +MT
Sbjct: 361 -PDNVKSQMDDKVLVRMEAIINSMT 384
>TIGR_CMR|CBU_0450 [details] [associations]
symbol:CBU_0450 "signal recognition particle protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0009306 "protein secretion" evidence=ISS]
[GO:0048501 "signal recognition particle, plasma membrane
targeting" evidence=ISS] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR004780
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0003924 GO:GO:0006184
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7
TIGRFAMs:TIGR00959 OMA:GQQVVKI ProtClustDB:PRK10867 HSSP:O07347
RefSeq:NP_819486.1 ProteinModelPortal:Q83E79 PRIDE:Q83E79
GeneID:1208334 KEGG:cbu:CBU_0450 PATRIC:17929591
BioCyc:CBUR227377:GJ7S-448-MONOMER Uniprot:Q83E79
Length = 461
Score = 917 (327.9 bits), Expect = 5.0e-92, P = 5.0e-92
Identities = 189/384 (49%), Positives = 269/384 (70%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
M LT+ L + NKL+G LT+ENI + DIR AL+EADV+LPVV+ F++ V E+A+
Sbjct: 1 MLNNLTNRLTTSINKLRGLGRLTEENIQSTLHDIRSALIEADVALPVVKDFIEHVREKAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +I VRP + LVK+V+DEL L+G E+ E+ P VI++AGLQG GKTT AKL
Sbjct: 61 GQEVIGNVRPGEALVKVVQDELTHLLGDELVEINLNAQPPIVIVMAGLQGSGKTTTVAKL 120
Query: 204 ANYLKK-QGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A +L + Q KS M+ + DVYRPAAI QL L Q+ + + KP +IAK L++A+
Sbjct: 121 ARWLLEIQKKSVMVASADVYRPAAIQQLETLASQINAIFFPTQADQKPVEIAKAALKQAE 180
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K+ +DV+I+DTAGRL ID +M+E+K + + PTE+LLVVD+M GQ+AA + +FN +
Sbjct: 181 KQFMDVLILDTAGRLHIDNVLMEEMKAISDAVTPTEILLVVDSMMGQDAANVAKSFNDTL 240
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
+TG ILTKLDGD+RGGAALS++ ++ KPIK VG GE+++ LEPF+P+RMA RILGMGD+
Sbjct: 241 PLTGVILTKLDGDTRGGAALSMRMITQKPIKFVGVGEKIDALEPFHPNRMASRILGMGDI 300
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSAN-FDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI 441
+S VE+AQ + Q+ A ++ KK+ N FDF+DFL Q + + +MG M ++G +PGMG++
Sbjct: 301 VSLVEEAQRKVDQKQAAKIAKKLQKGNRFDFDDFLAQLQQMKKMGGMQSLLGKLPGMGQL 360
Query: 442 TP-AQVREAEKSLKIMEAMIEAMT 464
A +K L M+A+I++MT
Sbjct: 361 PKGASAFLDDKLLVKMQAIIQSMT 384
>UNIPROTKB|P66844 [details] [associations]
symbol:ffh "Signal recognition particle protein"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] HAMAP:MF_00306
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR004780 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0005886 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0003924
GO:GO:0006184 EMBL:BX842581 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 TCDB:3.A.5.2.2 GO:GO:0005786 eggNOG:COG0541
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 HOGENOM:HOG000036164
PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959 OMA:GQQVVKI
ProtClustDB:PRK10867 PIR:D70747 RefSeq:NP_217432.1
RefSeq:NP_337496.1 RefSeq:YP_006516369.1 ProteinModelPortal:P66844
SMR:P66844 PRIDE:P66844 EnsemblBacteria:EBMYCT00000003158
EnsemblBacteria:EBMYCT00000069261 GeneID:13317709 GeneID:888242
GeneID:925291 KEGG:mtc:MT2984 KEGG:mtu:Rv2916c KEGG:mtv:RVBD_2916c
PATRIC:18128328 TubercuList:Rv2916c Uniprot:P66844
Length = 525
Score = 901 (322.2 bits), Expect = 2.5e-90, P = 2.5e-90
Identities = 189/389 (48%), Positives = 256/389 (65%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L AA L+G+ LT +I R+IR ALLEADVSLPVVR F+ + E+A
Sbjct: 1 MFESLSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERAR 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G + + P QQ+VKIV +EL+ ++GGE EL FAK+ PTV++LAGLQG GKTT++ KL
Sbjct: 61 GAEVSSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKL 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYT----AGTEVKPSQ---IAKQ 256
A L+ QG + +LVA D+ RPAA++QL ++GE+ GVPV+ A E P +A
Sbjct: 121 AARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAA 180
Query: 257 GLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVT 316
GL EA+ K+ DVVIVDTAGRL ID+ +M + ++ +NP EVL V+DAM GQ+A
Sbjct: 181 GLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAA 240
Query: 317 TFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRI 376
F +G TG LTKLDGD+RGGAALSV+EV+G PI GE++ED + F+PDRMA RI
Sbjct: 241 AFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300
Query: 377 LGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIP 436
LGMGDVLS +E+A++V + AEE KI + DFL+Q V +MG + ++GM+P
Sbjct: 301 LGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLEDFLEQMLAVRKMGPIGNLLGMLP 360
Query: 437 GMGKITPAQVREAEKSLKIMEAMIEAMTP 465
G ++ A +K L ++A+I MTP
Sbjct: 361 GAAQMKDALAEVDDKQLDRVQAIIRGMTP 389
>TIGR_CMR|GSU_0642 [details] [associations]
symbol:GSU_0642 "signal recognition particle protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0009306 "protein secretion" evidence=ISS]
[GO:0048501 "signal recognition particle, plasma membrane
targeting" evidence=ISS] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR004780
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0003924 GO:GO:0006184
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7
TIGRFAMs:TIGR00959 OMA:GQQVVKI ProtClustDB:PRK10867
RefSeq:NP_951699.1 ProteinModelPortal:Q74FG7 GeneID:2685362
KEGG:gsu:GSU0642 PATRIC:22024031 BioCyc:GSUL243231:GH27-644-MONOMER
Uniprot:Q74FG7
Length = 452
Score = 895 (320.1 bits), Expect = 1.1e-89, P = 1.1e-89
Identities = 182/385 (47%), Positives = 260/385 (67%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
M L+ L+ + KL+G+ +++ENI E +R++R LLEADV+ VV+ FV+ V +AV
Sbjct: 1 MLENLSDKLDVLFKKLRGQGVMSEENIKEALREVRLVLLEADVNFKVVKDFVERVRVRAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGG-EVSELVFAKSRPTVILLAGLQGVGKTTVSAK 202
G +++ + P QQ++KIV++ELV LMGG E + L A P I++ GLQG GKTT K
Sbjct: 61 GTQVLQSLTPGQQVIKIVQEELVALMGGGEDNSLDLAAKPPVPIMMVGLQGAGKTTSCGK 120
Query: 203 LANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
LA LK Q + +LV DVYRPAAI+QL LG Q+ V V+ + + P I ++ L A
Sbjct: 121 LARLLKGQRRRPLLVPADVYRPAAIEQLKTLGRQLSVEVFDSRADQDPVDICREALRYAT 180
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
DVVI+DTAGR QID+ +M+EL +K P E+L V DAMTGQEA + + FN +
Sbjct: 181 LNGFDVVILDTAGRHQIDEYLMNELVRIKEAAEPREILFVADAMTGQEAVNVASGFNDRL 240
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
ITG +LTKLDGD++GGAALS++ V+GKP+KLVG GE+++ LE F+ DR+ RILGMGD+
Sbjct: 241 DITGVVLTKLDGDAKGGAALSIRAVTGKPVKLVGVGEKLDALEVFHADRLVSRILGMGDI 300
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK-I 441
L+ VEKAQ ++AE +Q+K+ + FD DF Q + + +MGS+ ++GMIPG+GK +
Sbjct: 301 LTLVEKAQATFDSQEAERLQQKLKKSQFDLEDFRNQLQQIKKMGSIESILGMIPGVGKAM 360
Query: 442 TPAQ-VREAEKSLKIMEAMIEAMTP 465
Q + +E+ LK +EA+I +MTP
Sbjct: 361 KQLQGAQPSERELKRIEAIIGSMTP 385
>TIGR_CMR|SO_1356 [details] [associations]
symbol:SO_1356 "signal recognition particle protein Ffh"
species:211586 "Shewanella oneidensis MR-1" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0009306 "protein secretion" evidence=ISS]
[GO:0048501 "signal recognition particle, plasma membrane
targeting" evidence=ISS] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR004780
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0003924 GO:GO:0006184
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR001251
PROSITE:PS50191 GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364
GO:GO:0005786 KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446
HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959
OMA:GQQVVKI ProtClustDB:PRK10867 HSSP:O07347 RefSeq:NP_716976.1
ProteinModelPortal:Q8EH73 GeneID:1169177 KEGG:son:SO_1356
PATRIC:23522366 Uniprot:Q8EH73
Length = 457
Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
Identities = 184/386 (47%), Positives = 252/386 (65%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF LT L + G LT+EN+ E +R++R ALLEADV+LPVVR FV V E+AV
Sbjct: 1 MFENLTDRLSRTLKNISGRGRLTEENVKETLREVRMALLEADVALPVVREFVNNVKERAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G + + + P Q +KIV+ EL K MG L A P V+++AGLQG GKTT AKL
Sbjct: 61 GQEVAKSLSPGQAFIKIVQSELEKSMGEANQALDLATQPPAVVMMAGLQGAGKTTSVAKL 120
Query: 204 ANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
L+ + KS ++V+ DVYRPAAI QL L +V V + + KP IAK + AK
Sbjct: 121 GKLLRTRHKKSVLVVSADVYRPAAIKQLETLATEVDVEFFPSDVSQKPIDIAKAAIAHAK 180
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
K +DVVI+DTAGRL +D+AMMDE+K + L P E L VVDAMTGQ+AA FN +
Sbjct: 181 LKFIDVVILDTAGRLHVDEAMMDEIKALHAALKPIETLFVVDAMTGQDAANTAKAFNEAL 240
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
+TG ILTK+DGD+RGGAALS++ ++GKPIK +G GE+ + LEPF+PDR+A RILGMGDV
Sbjct: 241 PLTGVILTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFHPDRIASRILGMGDV 300
Query: 383 LSFVEKAQEVMQQEDAEEMQKKI-MSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI 441
LS +E+ + + +E A ++ K+ +FD DF +Q + + MG M +I +PG+G++
Sbjct: 301 LSLIEEVERGVDKEKAMKLASKVKQGGSFDLEDFREQLQQMKNMGGMMSMIEKLPGVGQL 360
Query: 442 TP---AQVREAEKSLKIMEAMIEAMT 464
P AQ+++ K + MEA+I +MT
Sbjct: 361 PPDALAQIQDG-KMTRQMEAIINSMT 385
>TIGR_CMR|VC_0560 [details] [associations]
symbol:VC_0560 "signal recognition particle protein"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0009306 "protein secretion" evidence=ISS]
[GO:0048501 "signal recognition particle, plasma membrane
targeting" evidence=ISS] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR004780
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003924 GO:GO:0006184 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959
OMA:GQQVVKI ProtClustDB:PRK10867 PIR:H82306 RefSeq:NP_230211.1
HSSP:P07019 ProteinModelPortal:Q9KUG1 SMR:Q9KUG1 DNASU:2615237
GeneID:2615237 KEGG:vch:VC0560 PATRIC:20080238 Uniprot:Q9KUG1
Length = 461
Score = 869 (311.0 bits), Expect = 6.0e-87, P = 6.0e-87
Identities = 185/385 (48%), Positives = 251/385 (65%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF LT L + G+ LT++NI + +R++R ALLEADV+LPVVR FV V E AV
Sbjct: 1 MFENLTDRLSKTLKNISGKGRLTEDNIKDTLREVRMALLEADVALPVVRDFVNRVKEGAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
GV + + + P Q+ +KIVR +L +MG L A P VIL+AGLQG GKTT KL
Sbjct: 61 GVEVSKSLTPGQEFIKIVRQQLEAVMGESNEALNLAAQPPAVILMAGLQGAGKTTSVGKL 120
Query: 204 ANYLKKQGKSCMLV-AGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
+ LK++ K +LV + DVYRPAAI QL L +GV + + + KP IA ++ AK
Sbjct: 121 SKLLKERDKKKVLVVSADVYRPAAIKQLETLANDLGVDFFPSTPDQKPIDIANAAIDHAK 180
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
KK DV+IVDTAGRL ID+ MM E++ + + +NP E L VVDAMTGQ+AA F +
Sbjct: 181 KKFYDVLIVDTAGRLAIDEQMMAEIQALHKAINPVETLFVVDAMTGQDAADTAKAFGDAL 240
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
+TG ILTK+DGD+RGGAALSV+ ++GKPIK +G GE+ + LEPF+PDR+A RILGMGDV
Sbjct: 241 PLTGVILTKVDGDARGGAALSVRHITGKPIKFIGVGEKTDALEPFHPDRIASRILGMGDV 300
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSAN-FDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI 441
LS +E Q + QE AE++ KK FD DF +Q + MG M ++ +PGM ++
Sbjct: 301 LSLIEDLQRNVDQEKAEKLAKKFKEKKGFDLEDFREQLGQMKNMGGMMGMLDKLPGMSQL 360
Query: 442 TPAQVREA--EKSLKIMEAMIEAMT 464
PA +++ ++ K MEA+I +MT
Sbjct: 361 -PADMKDKVDDRVFKQMEAIINSMT 384
>TIGR_CMR|SPO_3246 [details] [associations]
symbol:SPO_3246 "signal recognition particle protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0006617 "SRP-dependent cotranslational protein
targeting to membrane, signal sequence recognition" evidence=ISS]
[GO:0009306 "protein secretion" evidence=ISS] [GO:0048501 "signal
recognition particle, plasma membrane targeting" evidence=ISS]
HAMAP:MF_00306 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR004780 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003924
GO:GO:0006184 GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364
GO:GO:0005786 KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446
HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959
OMA:GQQVVKI ProtClustDB:PRK10867 RefSeq:YP_168449.1
ProteinModelPortal:Q5LNF9 GeneID:3195205 KEGG:sil:SPO3246
PATRIC:23379937 Uniprot:Q5LNF9
Length = 510
Score = 865 (309.6 bits), Expect = 1.6e-86, P = 1.6e-86
Identities = 180/386 (46%), Positives = 259/386 (67%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L +++L + L++E++ +R++R ALLEADVSLPV R FV+AV ++A
Sbjct: 1 MFENLSERLSGVFDRLTKQGALSEEDVKTALREVRVALLEADVSLPVARDFVKAVQDKAT 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLM-GGEVSELVFAKSRPTVILLAGLQGVGKTTVSAK 202
G + + V P QQ+VKIV D LV ++ G E + + P IL+ GLQG GKTT +AK
Sbjct: 61 GQAVTKSVTPGQQVVKIVHDTLVDVLRGAEDPGKLKIDNPPAPILMVGLQGGGKTTTTAK 120
Query: 203 LANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEA 261
LA LK ++GK ++ + DVYRPAA+DQL +LG Q+GV KP IAK+ ++A
Sbjct: 121 LAKRLKEREGKKVLMASLDVYRPAAMDQLAVLGAQIGVDTLPIVPGQKPVDIAKRAKQQA 180
Query: 262 KKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIE 321
DV ++DTAGRL ID+ +M E++DV+ V+ P E LLVVD +TGQ A + F+ +
Sbjct: 181 MMGGYDVYMLDTAGRLHIDQVLMQEVEDVRNVVTPRETLLVVDGLTGQVAVEVAEEFDAK 240
Query: 322 IGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGD 381
IGI+G +LT++DGD RGGAALS++ V+GKPI+ VG GE+M+ LE F P+R+AGRILGMGD
Sbjct: 241 IGISGVVLTRMDGDGRGGAALSMRAVTGKPIRFVGLGEKMDALETFEPERIAGRILGMGD 300
Query: 382 VLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKI 441
+++ VEKAQE ++ E AE M K++ F+ ND Q + +MG M ++GM+PGMGK+
Sbjct: 301 IVALVEKAQETIEMEQAERMMKRMAKGQFNMNDLKMQLEQMIQMGGMQGMMGMLPGMGKM 360
Query: 442 TPAQVREA---EKSLKIMEAMIEAMT 464
Q+ A ++ LK A+I++MT
Sbjct: 361 AK-QMDAAGLDDRVLKQQIALIQSMT 385
>TIGR_CMR|CPS_4073 [details] [associations]
symbol:CPS_4073 "signal recognition particle protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005786 "signal recognition particle,
endoplasmic reticulum targeting" evidence=ISS] [GO:0006617
"SRP-dependent cotranslational protein targeting to membrane,
signal sequence recognition" evidence=ISS] HAMAP:MF_00306
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR004780 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0003924 GO:GO:0006184 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786
eggNOG:COG0541 KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446
HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959
OMA:GQQVVKI ProtClustDB:PRK10867 RefSeq:YP_270728.1
ProteinModelPortal:Q47WU4 SMR:Q47WU4 STRING:Q47WU4 GeneID:3519232
KEGG:cps:CPS_4073 PATRIC:21471017
BioCyc:CPSY167879:GI48-4086-MONOMER Uniprot:Q47WU4
Length = 463
Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
Identities = 180/387 (46%), Positives = 254/387 (65%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ L + G LT++NI E +R++R ALLEADV+LPV+R F+ V E+AV
Sbjct: 1 MFDNLSERLSKTLKNISGRGRLTEDNIKETLREVRMALLEADVALPVIREFIAKVKEKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSE-LVFAKSRPTVILLAGLQGVGKTTVSAK 202
G + + + P Q VKIV+ EL MG EV+E L + P V+L+AGLQG GKTT AK
Sbjct: 61 GTDVSKSLTPGQIFVKIVQKELESAMG-EVNEGLDLRAAPPAVVLMAGLQGAGKTTSVAK 119
Query: 203 LANYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEA 261
LA +L +++ K ++V+ DVYRPAAI QL L E++ V + + + KP IA ++ A
Sbjct: 120 LAKFLTEREKKKVLVVSADVYRPAAIKQLETLAEEISVGFFPSDIKQKPIDIANAAIDHA 179
Query: 262 KKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIE 321
KK DV+IVDTAGRL ID+ MM E++ + +NP E L VDAMTGQ+AA FN
Sbjct: 180 KKNFYDVLIVDTAGRLHIDENMMAEIQQLHAAINPIETLFTVDAMTGQDAANTAKAFNDA 239
Query: 322 IGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGD 381
+ +TG ILTK DGD+RGGAALS++ ++GKPIK +G GE++E LEPF+PDR+A RILGMGD
Sbjct: 240 LPLTGIILTKTDGDARGGAALSIRHITGKPIKFMGVGEKIEALEPFHPDRIASRILGMGD 299
Query: 382 VLSFVEKAQEVMQQEDAEEMQKKIMSAN-FDFNDFLKQTRTVARMGSMSRVIGMIPGMGK 440
VLS VE+ ++ + ++ AE++ K+ S F DF Q + MG M+ ++ +PGMG
Sbjct: 300 VLSLVEEIEQKVDRKQAEKLANKVKSGKGFSLEDFRDQLVQMKSMGGMTGMMDKLPGMGN 359
Query: 441 ITPAQVREAEKSLKI-MEAMIEAMTPG 466
++ + + + + MEA+I +MTPG
Sbjct: 360 MSGKIKDQMDDKITVQMEAIINSMTPG 386
>UNIPROTKB|O07347 [details] [associations]
symbol:ffh "Signal recognition particle protein"
species:271 "Thermus aquaticus" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_00306 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR004780 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 GO:GO:0006184 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 PDB:1OKK PDB:1RJ9 PDB:2CNW PDB:2J7P
PDB:2XKV PDBsum:1OKK PDBsum:1RJ9 PDBsum:2CNW PDBsum:2J7P
PDBsum:2XKV PDB:1RY1 PDBsum:1RY1 GO:GO:0005786 Gene3D:1.10.260.30
SUPFAM:SSF47446 PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959
EMBL:U82109 PDB:1FFH PDB:1JPJ PDB:1JPN PDB:1LS1 PDB:1NG1 PDB:1O87
PDB:2C03 PDB:2C04 PDB:2FFH PDB:2IY3 PDB:2J45 PDB:2J46 PDB:2NG1
PDB:3NG1 PDBsum:1FFH PDBsum:1JPJ PDBsum:1JPN PDBsum:1LS1
PDBsum:1NG1 PDBsum:1O87 PDBsum:2C03 PDBsum:2C04 PDBsum:2FFH
PDBsum:2IY3 PDBsum:2J45 PDBsum:2J46 PDBsum:2NG1 PDBsum:3NG1
ProteinModelPortal:O07347 SMR:O07347 IntAct:O07347
EvolutionaryTrace:O07347 Uniprot:O07347
Length = 430
Score = 819 (293.4 bits), Expect = 1.2e-81, P = 1.2e-81
Identities = 174/382 (45%), Positives = 256/382 (67%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF QL++ L+ A +L+G +T+E++ +R+IRRAL++ADV+L V R FV+ V E+A+
Sbjct: 1 MFQQLSARLQEAIGRLRGRGRITEEDLKATLREIRRALMDADVNLEVARDFVERVREEAL 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++ + P + ++ V + L + +GGE + L K R + L GLQG GKTT +AKL
Sbjct: 61 GKQVLESLTPAEVILATVYEALKEALGGE-ARLPVLKDR-NLWFLVGLQGSGKTTTAAKL 118
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A Y K +G+ +LVA D RPAA +QL +LGE+VGVPV P I ++ E+A+
Sbjct: 119 ALYYKGKGRRPLLVAADTQRPAAREQLRLLGEKVGVPVLEVMDGESPESIRRRVEEKARL 178
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
+ D+++VDTAGRLQID+ +M EL +K VL P EVLLV+DAMTGQEA ++ F+ ++G
Sbjct: 179 EARDLILVDTAGRLQIDEPLMGELARLKEVLGPDEVLLVLDAMTGQEALSVARAFDEKVG 238
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
+TG +LTKLDGD+RGGAALS + V+GKPI G E+ E LEPFYP+R+AGRILGMGDV
Sbjct: 239 VTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVSEKPEGLEPFYPERLAGRILGMGDVA 298
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S EK + + +A + K++ DFLKQ + + R+G S ++G++PG+ P
Sbjct: 299 SLAEKVRAAGLEAEAPKSAKEL-----SLEDFLKQMQNLKRLGPFSEILGLLPGV----P 349
Query: 444 AQVREAEKSLKIMEAMIEAMTP 465
++ EK++K +EA++ +MTP
Sbjct: 350 QGLKVDEKAIKRLEAIVLSMTP 371
>TIGR_CMR|ECH_0475 [details] [associations]
symbol:ECH_0475 "signal recognition particle protein"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0005048 "signal sequence
binding" evidence=ISS] [GO:0006617 "SRP-dependent cotranslational
protein targeting to membrane, signal sequence recognition"
evidence=ISS] [GO:0009306 "protein secretion" evidence=ISS]
[GO:0048501 "signal recognition particle, plasma membrane
targeting" evidence=ISS] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR004780 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 EMBL:CP000236 GenomeReviews:CP000236_GR
GO:GO:0003924 GO:GO:0006184 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 eggNOG:COG0541 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7
TIGRFAMs:TIGR00959 OMA:GQQVVKI ProtClustDB:PRK10867 GO:GO:0048500
RefSeq:YP_507291.1 ProteinModelPortal:Q2GGZ2 STRING:Q2GGZ2
GeneID:3927281 KEGG:ech:ECH_0475 PATRIC:20576422
BioCyc:ECHA205920:GJNR-477-MONOMER Uniprot:Q2GGZ2
Length = 448
Score = 812 (290.9 bits), Expect = 6.6e-81, P = 6.6e-81
Identities = 166/383 (43%), Positives = 249/383 (65%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF LTS L K++ + ++ E+ M +++ ALLEADVSL VV+ F+ V E+ V
Sbjct: 1 MFESLTSSLTNVIQKMQSKHVISSEDFDAAMEEVKVALLEADVSLAVVKDFISNVKEKIV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++GV P Q ++K ++D L++++G E EL +K +VI++ GLQGVGKTT +AKL
Sbjct: 61 GGTTVKGVLPTQMIIKKIQDCLIEVLGSEKCELDISKPL-SVIMMVGLQGVGKTTTTAKL 119
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A LK + K ++ + DVYRPAA QL ILG+Q+ V P I K+ ++ A++
Sbjct: 120 ALKLKNKKKEVVMASLDVYRPAAQKQLEILGKQIDVQTLPIIENQAPIDIVKRAMDNAQQ 179
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
N DV+I+DTAGRL +D+ MM+EL+ +K + +P+EV+LVVD+M GQ+A + +FN IG
Sbjct: 180 ANCDVLILDTAGRLHVDQVMMEELRAIKDLTSPSEVILVVDSMIGQDAINVAKSFNDNIG 239
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG ILT++DGDSRGGAALS+K G PIK + GE++ DL+ FYP+R+A RIL MGDV+
Sbjct: 240 ITGIILTRIDGDSRGGAALSMKMSVGSPIKFIANGEKLSDLDDFYPERIAKRILNMGDVV 299
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKA E + + +EMQKK FD ND ++Q + + ++G ++ ++ +P G
Sbjct: 300 SLVEKATEAVGKHAIDEMQKKAQKGKFDLNDLVQQLKALNKLGGIANILKFMPNFGADVK 359
Query: 444 AQVREAEKSLKIME--AMIEAMT 464
QV ++ + A++ +MT
Sbjct: 360 RQVSGIANDSRVKQYIAIVNSMT 382
>NCBI_NP|NP_355632.2 [details] [associations]
symbol:ffh "signal recognition particle protein"
species:176299 "Agrobacterium fabrum str. C58" [GO:0009306 "protein
secretion" evidence=ISS] REFSEQ:NC_003062 Ncbi:NP_355632
Length = 523
Score = 805 (288.4 bits), Expect = 3.7e-80, P = 3.7e-80
Identities = 172/384 (44%), Positives = 241/384 (62%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L L + N L G LT+ ++ +R++RRALLEADV+L VVR F V E+AV
Sbjct: 1 MFENLQDRLGSILNGLTGRGALTEADVAAALREVRRALLEADVALEVVRSFTDRVREKAV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++ ++P Q +VKIV DELV+++G E + + P VI++ GLQG GKTT + K+
Sbjct: 61 GAAVLKSIKPGQMVVKIVHDELVEMLGTEGVSIDLHAAAPVVIMMVGLQGSGKTTTTGKI 120
Query: 204 ANYLKKQGKSCMLVAG-DVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A L + K +L+A D RPAA +QL LG Q GV P+ IA + ++ AK
Sbjct: 121 AKRLTDRDKKKVLMASLDTRRPAAQEQLRQLGVQTGVDTLPIIAGQSPTDIAARAVQAAK 180
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
DVVI+DTAGR ID+ +M E+ D+K+ NP E+LLV D++TGQ+A L F+ +
Sbjct: 181 LGGHDVVILDTAGRTHIDEPLMLEMADIKKKSNPHEILLVADSLTGQDAVNLARNFDERV 240
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
GITG +LT++DGD RGGAALS++ V+GKPIKL+G GERM +L+ F+P R+A RILGMGD+
Sbjct: 241 GITGLVLTRMDGDGRGGAALSMRAVTGKPIKLIGIGERMNELDEFHPRRIADRILGMGDI 300
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG--K 440
+S VEKA E + E A M +K+ FD ND Q + +MG M ++G++PGM K
Sbjct: 301 VSLVEKAAENIDAEKARSMAEKMAKGKFDLNDLADQLGQMKKMGGMGGIMGLMPGMAGMK 360
Query: 441 ITPAQVREAEKSLKIMEAMIEAMT 464
A +K A+I +MT
Sbjct: 361 DKMASAGMNDKMFDRQIAIISSMT 384
>TIGR_CMR|APH_0349 [details] [associations]
symbol:APH_0349 "signal recognition particle protein"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0006617 "SRP-dependent cotranslational protein
targeting to membrane, signal sequence recognition" evidence=ISS]
[GO:0009306 "protein secretion" evidence=ISS] [GO:0048501 "signal
recognition particle, plasma membrane targeting" evidence=ISS]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR004780 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0003924 GO:GO:0006184
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 eggNOG:COG0541 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7
TIGRFAMs:TIGR00959 OMA:GQQVVKI ProtClustDB:PRK10867 GO:GO:0048500
RefSeq:YP_504956.1 ProteinModelPortal:Q2GKZ5 STRING:Q2GKZ5
GeneID:3930944 KEGG:aph:APH_0349 PATRIC:20949288
BioCyc:APHA212042:GHPM-378-MONOMER Uniprot:Q2GKZ5
Length = 449
Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
Identities = 165/383 (43%), Positives = 246/383 (64%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF LT G +A +L G+ ++ ++ + DI +ALL+ADV+L VV F++ V + V
Sbjct: 1 MFNSLTKGFSSALQRLSGKREISSKDFDLVIEDITQALLDADVNLGVVDEFIENVKSKIV 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G +++GV P+Q ++K + + L++++G E S L P VI++ GLQGVGKTT + K+
Sbjct: 61 GGDVVKGVLPEQMVIKRIEECLIEVLGNEKSALDLKGKIPAVIMMVGLQGVGKTTNTVKV 120
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
A LKK K+ ++ + DVYRPAA +QL +L + VG+ E KP IAK+ + EA+
Sbjct: 121 ALRLKKDSKNPLVASLDVYRPAAREQLKVLADGVGIDSLPIVEEQKPLDIAKRAMREARL 180
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
K DVV++DTAGRL I++ M+DELK VK+ ++P E++LVVD++ GQ+A +V FN E+G
Sbjct: 181 KGHDVVLLDTAGRLHINQDMIDELKCVKKEVSPAEIVLVVDSLMGQDAVTMVRKFNEELG 240
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
ITG I T+ DGD RGGA LS+K V+G PIK + GE+ EDL+ FYPDR+A R+L MGDV
Sbjct: 241 ITGTIFTRADGDPRGGAILSMKLVAGCPIKFMSTGEKPEDLDDFYPDRIARRMLNMGDVA 300
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
S VEKA E + ++ E+Q K FD +D + Q + + +MG ++ ++ IP G
Sbjct: 301 SLVEKAVEAVGKDTINELQAKAKKGKFDLDDLVIQLKALNKMGGIANIMKFIPAFGNDIK 360
Query: 444 AQVREAEKSLKI-ME-AMIEAMT 464
+V K+ M A+I +MT
Sbjct: 361 RKVAGIADDSKVDMYIAIINSMT 383
>TIGR_CMR|NSE_0540 [details] [associations]
symbol:NSE_0540 "signal recognition particle protein"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0006617 "SRP-dependent
cotranslational protein targeting to membrane, signal sequence
recognition" evidence=ISS] [GO:0048501 "signal recognition
particle, plasma membrane targeting" evidence=ISS]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR004780 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 GO:GO:0006184 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 eggNOG:COG0541 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7
OMA:GQQVVKI ProtClustDB:PRK10867 GO:GO:0048500 RefSeq:YP_506423.1
ProteinModelPortal:Q2GDM3 STRING:Q2GDM3 GeneID:3931977
KEGG:nse:NSE_0540 PATRIC:22681129
BioCyc:NSEN222891:GHFU-559-MONOMER Uniprot:Q2GDM3
Length = 449
Score = 714 (256.4 bits), Expect = 1.6e-70, P = 1.6e-70
Identities = 152/387 (39%), Positives = 244/387 (63%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF L+ + A + +K +T++ + +R +R LEADVSLPV ++F+ V E +
Sbjct: 1 MFDSLSKKIGGALDGIKNRGVITEKEFDDFVRKLRLTFLEADVSLPVTKQFIANVRESVI 60
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G ++G+ + +V++ELVK++GGE + F K +++ GLQGVGKTT +AKL
Sbjct: 61 GKSRVKGISTPAVIGSVVKEELVKILGGESQKFEFPKFGKQILMFVGLQGVGKTTTAAKL 120
Query: 204 ANYLKKQGKSCMLVAG-DVYRPAAIDQLVILGEQVGV---PVYTAGTEVKPSQIAKQGLE 259
A ++K+ K +L++ D+YRPAA QL IL +Q+ V P+ G +V I K+ L+
Sbjct: 121 ALLIRKKFKKNILLSSVDIYRPAARKQLEILAKQIDVDTVPI-VEGEDV--DAIVKKTLD 177
Query: 260 --EAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTT 317
+ DV++VDTAGR QID +M+ELK +K L P+E+ V+DAM GQ++ + T
Sbjct: 178 LFNNSHEGYDVLMVDTAGRSQIDSVLMEELKVIKNRLQPSEIFQVLDAMMGQDSLNVART 237
Query: 318 FNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRIL 377
F+ EIG TG I+++LD D+R G+ LSV++ G PI+ G GER+ DLE F+P+RMAGRI+
Sbjct: 238 FHSEIGTTGVIVSRLDSDARVGSVLSVRQSVGLPIRFCGAGERVNDLEEFHPERMAGRIM 297
Query: 378 GMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPG 437
G GD+ S VE A + +E ++K+I + FD++D + Q +++ ++G +++++ IPG
Sbjct: 298 GAGDIASLVEYASSEVGEERIGSIRKRIEAGKFDYDDLVLQLKSIDKLGGIAKLLRFIPG 357
Query: 438 MGKITPAQVREAEKSLKIMEAMIEAMT 464
+ K+ P + + +LK AMI +MT
Sbjct: 358 INKV-PTEHLVDDTTLKKNLAMIGSMT 383
>TIGR_CMR|CJE_0809 [details] [associations]
symbol:CJE_0809 "signal recognition particle protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0009306 "protein secretion" evidence=ISS]
[GO:0048501 "signal recognition particle, plasma membrane
targeting" evidence=ISS] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR004780 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0003924 GO:GO:0006184 EMBL:CP000025 GenomeReviews:CP000025_GR
GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364 eggNOG:COG0541
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 HOGENOM:HOG000036164
OMA:DSGKTEQ PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959
ProtClustDB:PRK10867 GO:GO:0048500 RefSeq:YP_178813.1
ProteinModelPortal:Q5HV72 STRING:Q5HV72 GeneID:3230759
KEGG:cjr:CJE0809 PATRIC:20043363 BioCyc:CJEJ195099:GJC0-824-MONOMER
Uniprot:Q5HV72
Length = 445
Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
Identities = 149/386 (38%), Positives = 241/386 (62%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
MF ++ ++A NKL+ + ++ + + +++ALL+ADV V + + + E
Sbjct: 1 MFELVSESFKSAINKLRFVDD--EKALKNALETLKKALLKADVHHKVTKELLTLIEEDVK 58
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
G+ G + +K+ + ++ + G+ VFA PTV+L+AGLQG GKTT + KL
Sbjct: 59 QNGI--GQKQFLNAIKVNLENILSV-NGKNQGFVFASKPPTVVLMAGLQGGGKTTSTIKL 115
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
ANYLK + K ++ A D+ R AA++QL L E + ++ E P ++AK+ L++A+
Sbjct: 116 ANYLKLRNKKVLVAACDLQRLAAVEQLRQLCEANEIELFFIENEKDPIRVAKEALKKAES 175
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
VDV++VDTAGRL ID+A+M+ELK VK VLNP E+ V DAM+GQ+ +FN +
Sbjct: 176 SMVDVLLVDTAGRLAIDEALMNELKAVKDVLNPDEIFYVADAMSGQDGVKTAASFNEALN 235
Query: 324 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 383
I+G IL+K D D++GG AL + + G P++ +G GE++ DLE F PDR+ RI+G GD+
Sbjct: 236 ISGVILSKFDADTKGGVALGIAKQIGIPLRFIGVGEKVADLEVFIPDRIVSRIMGEGDLA 295
Query: 384 SFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP 443
+ EK V+ +++A+++ +KI F+FNDFL Q ++ ++GSM +IGMIPG+G +
Sbjct: 296 TLAEKTAAVIDEKEAKKLNQKIKKGEFNFNDFLNQMESIKKLGSMKSLIGMIPGLGGMAN 355
Query: 444 AQVREAE----KSLKIMEAMIEAMTP 465
A V++ + K + ++AMI +MTP
Sbjct: 356 A-VKDIDLDNSKEIIHIKAMISSMTP 380
>UNIPROTKB|Q2T9U1 [details] [associations]
symbol:SRP54 "Signal recognition particle 54 kDa protein"
species:9913 "Bos taurus" [GO:0042493 "response to drug"
evidence=ISS] [GO:0045047 "protein targeting to ER" evidence=ISS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0005525 "GTP
binding" evidence=ISS] [GO:0008144 "drug binding" evidence=ISS]
[GO:0008312 "7S RNA binding" evidence=ISS] [GO:0019003 "GDP
binding" evidence=ISS] [GO:0030942 "endoplasmic reticulum signal
peptide binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005786 "signal recognition particle, endoplasmic reticulum
targeting" evidence=ISS] [GO:0043021 "ribonucleoprotein complex
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005634 GO:GO:0042493 GO:GO:0008144
GO:GO:0003924 GO:GO:0043021 GO:GO:0019003 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0045047 GO:GO:0005786
eggNOG:COG0541 HOGENOM:HOG000036165 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 GO:GO:0030942 EMBL:BC111270
IPI:IPI00698247 RefSeq:NP_001033290.1 UniGene:Bt.36654 HSSP:Q6MTB9
ProteinModelPortal:Q2T9U1 SMR:Q2T9U1 STRING:Q2T9U1 PRIDE:Q2T9U1
Ensembl:ENSBTAT00000025405 GeneID:614017 KEGG:bta:614017 CTD:6729
GeneTree:ENSGT00550000074824 HOVERGEN:HBG061072 InParanoid:Q2T9U1
OMA:GQQVVKI OrthoDB:EOG45MN54 NextBio:20898897 Uniprot:Q2T9U1
Length = 504
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 123/381 (32%), Positives = 213/381 (55%)
Query: 82 AEMFGQLTSGLEAAWNKLKGEETLTKENIVEPM-RDIRRALLEADVSLPVVRRFVQAVSE 140
A++ ++TS L + N T+ E ++ M +++ ALLEADV++ +V++ + V +
Sbjct: 4 ADLGRKITSALRSLSNA-----TIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENV-K 57
Query: 141 QAVGVG-LIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTV 199
A+ + + G+ + + V ELVKL+ V K + VI+ GLQG GKTT
Sbjct: 58 SAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTT 117
Query: 200 SAKLANYLKKQG-KSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGL 258
+KLA Y +++G K+C++ A D +R A DQL + +P Y + TE+ P IA +G+
Sbjct: 118 CSKLAYYYQRKGWKTCLICA-DTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGV 176
Query: 259 EEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTF 318
E+ K +N +++IVDT+GR + + ++ +E+ V + P ++ V+DA GQ A F
Sbjct: 177 EKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAF 236
Query: 319 NIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILG 378
++ + I+TKLDG ++GG ALS + PI +G GE ++D EPF ++LG
Sbjct: 237 KDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLG 296
Query: 379 MGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM 438
MGD+ ++K E ++ +D E + +K+ F D +Q + + +MG S+++GMIPG
Sbjct: 297 MGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGF 355
Query: 439 GKITPAQVREAEKSLKIMEAM 459
G ++ E E ++ + M
Sbjct: 356 GTDFMSKGNEQESMARLKKLM 376
>UNIPROTKB|P61010 [details] [associations]
symbol:SRP54 "Signal recognition particle 54 kDa protein"
species:9615 "Canis lupus familiaris" [GO:0005829 "cytosol"
evidence=TAS] [GO:0030942 "endoplasmic reticulum signal peptide
binding" evidence=ISS;IMP] [GO:0042493 "response to drug"
evidence=ISS] [GO:0045047 "protein targeting to ER"
evidence=ISS;IMP] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0008144 "drug binding"
evidence=ISS] [GO:0008312 "7S RNA binding" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005786 "signal recognition particle, endoplasmic
reticulum targeting" evidence=ISS] [GO:0006616 "SRP-dependent
cotranslational protein targeting to membrane, translocation"
evidence=IDA] [GO:0006617 "SRP-dependent cotranslational protein
targeting to membrane, signal sequence recognition" evidence=IMP]
[GO:0043021 "ribonucleoprotein complex binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] Reactome:REACT_86357
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0005829 GO:GO:0005634 GO:GO:0042493 GO:GO:0008144
GO:GO:0003924 GO:GO:0043021 GO:GO:0019003 GO:GO:0008312
SUPFAM:SSF47364 GO:GO:0006616 GO:GO:0005786 GO:GO:0006617
eggNOG:COG0541 HOGENOM:HOG000036165 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 Reactome:REACT_146484
GO:GO:0030942 PDB:2J37 PDBsum:2J37 CTD:6729
GeneTree:ENSGT00550000074824 HOVERGEN:HBG061072 OMA:GQQVVKI
OrthoDB:EOG45MN54 EMBL:X16318 PIR:S05197 RefSeq:NP_001003272.1
UniGene:Cfa.3810 PDB:2GO5 PDBsum:2GO5 ProteinModelPortal:P61010
SMR:P61010 STRING:P61010 PRIDE:P61010 Ensembl:ENSCAFT00000021158
GeneID:403953 KEGG:cfa:403953 InParanoid:P61010
EvolutionaryTrace:P61010 NextBio:20817443 Uniprot:P61010
Length = 504
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 123/381 (32%), Positives = 213/381 (55%)
Query: 82 AEMFGQLTSGLEAAWNKLKGEETLTKENIVEPM-RDIRRALLEADVSLPVVRRFVQAVSE 140
A++ ++TS L + N T+ E ++ M +++ ALLEADV++ +V++ + V +
Sbjct: 4 ADLGRKITSALRSLSNA-----TIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENV-K 57
Query: 141 QAVGVG-LIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTV 199
A+ + + G+ + + V ELVKL+ V K + VI+ GLQG GKTT
Sbjct: 58 SAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTT 117
Query: 200 SAKLANYLKKQG-KSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGL 258
+KLA Y +++G K+C++ A D +R A DQL + +P Y + TE+ P IA +G+
Sbjct: 118 CSKLAYYYQRKGWKTCLICA-DTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGV 176
Query: 259 EEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTF 318
E+ K +N +++IVDT+GR + + ++ +E+ V + P ++ V+DA GQ A F
Sbjct: 177 EKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAF 236
Query: 319 NIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILG 378
++ + I+TKLDG ++GG ALS + PI +G GE ++D EPF ++LG
Sbjct: 237 KDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLG 296
Query: 379 MGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM 438
MGD+ ++K E ++ +D E + +K+ F D +Q + + +MG S+++GMIPG
Sbjct: 297 MGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGF 355
Query: 439 GKITPAQVREAEKSLKIMEAM 459
G ++ E E ++ + M
Sbjct: 356 GTDFMSKGNEQESMARLKKLM 376
>UNIPROTKB|P61011 [details] [associations]
symbol:SRP54 "Signal recognition particle 54 kDa protein"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0008144 "drug
binding" evidence=IDA] [GO:0006617 "SRP-dependent cotranslational
protein targeting to membrane, signal sequence recognition"
evidence=ISS] [GO:0030942 "endoplasmic reticulum signal peptide
binding" evidence=IDA] [GO:0008312 "7S RNA binding" evidence=IDA]
[GO:0006616 "SRP-dependent cotranslational protein targeting to
membrane, translocation" evidence=ISS] [GO:0005525 "GTP binding"
evidence=IDA] [GO:0019003 "GDP binding" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0005786 "signal recognition
particle, endoplasmic reticulum targeting" evidence=IDA]
[GO:0042493 "response to drug" evidence=IDA] [GO:0045047 "protein
targeting to ER" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IC;TAS] [GO:0043021 "ribonucleoprotein complex binding"
evidence=IDA] [GO:0005829 "cytosol" evidence=TAS] [GO:0006412
"translation" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0044267 "cellular protein metabolic process"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=IDA]
Reactome:REACT_71 Reactome:REACT_17015 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR006325
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0005829 GO:GO:0005730
GO:GO:0042493 GO:GO:0006412 GO:GO:0016607 GO:GO:0008144
GO:GO:0003924 GO:GO:0006184 GO:GO:0043021 GO:GO:0019003
TCDB:3.A.5.9.1 GO:GO:0008312 SUPFAM:SSF47364 GO:GO:0006616
GO:GO:0005786 GO:GO:0006617 eggNOG:COG0541 HOGENOM:HOG000036165
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425
GO:GO:0030942 PDB:1MFQ PDBsum:1MFQ CTD:6729 HOVERGEN:HBG061072
OMA:GQQVVKI OrthoDB:EOG45MN54 EMBL:X86373 EMBL:U51920 EMBL:AK300824
EMBL:AK312853 EMBL:AL049776 EMBL:BC000652 EMBL:BC003389
IPI:IPI00009822 IPI:IPI00929464 PIR:S54143 RefSeq:NP_001139754.1
RefSeq:NP_003127.1 UniGene:Hs.167535 PDB:1QB2 PDBsum:1QB2
ProteinModelPortal:P61011 SMR:P61011 IntAct:P61011 STRING:P61011
PhosphoSite:P61011 DMDM:46577650 PaxDb:P61011 PRIDE:P61011
DNASU:6729 Ensembl:ENST00000216774 Ensembl:ENST00000546080
Ensembl:ENST00000556994 GeneID:6729 KEGG:hsa:6729 UCSC:uc001wso.3
GeneCards:GC14P035452 HGNC:HGNC:11301 HPA:HPA048977 MIM:604857
neXtProt:NX_P61011 PharmGKB:PA36125 InParanoid:P61011
PhylomeDB:P61011 ChiTaRS:SRP54 EvolutionaryTrace:P61011
GenomeRNAi:6729 NextBio:26248 ArrayExpress:P61011 Bgee:P61011
CleanEx:HS_SRP54 Genevestigator:P61011 GermOnline:ENSG00000100883
Uniprot:P61011
Length = 504
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 123/381 (32%), Positives = 213/381 (55%)
Query: 82 AEMFGQLTSGLEAAWNKLKGEETLTKENIVEPM-RDIRRALLEADVSLPVVRRFVQAVSE 140
A++ ++TS L + N T+ E ++ M +++ ALLEADV++ +V++ + V +
Sbjct: 4 ADLGRKITSALRSLSNA-----TIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENV-K 57
Query: 141 QAVGVG-LIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTV 199
A+ + + G+ + + V ELVKL+ V K + VI+ GLQG GKTT
Sbjct: 58 SAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTT 117
Query: 200 SAKLANYLKKQG-KSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGL 258
+KLA Y +++G K+C++ A D +R A DQL + +P Y + TE+ P IA +G+
Sbjct: 118 CSKLAYYYQRKGWKTCLICA-DTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGV 176
Query: 259 EEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTF 318
E+ K +N +++IVDT+GR + + ++ +E+ V + P ++ V+DA GQ A F
Sbjct: 177 EKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAF 236
Query: 319 NIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILG 378
++ + I+TKLDG ++GG ALS + PI +G GE ++D EPF ++LG
Sbjct: 237 KDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLG 296
Query: 379 MGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM 438
MGD+ ++K E ++ +D E + +K+ F D +Q + + +MG S+++GMIPG
Sbjct: 297 MGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGF 355
Query: 439 GKITPAQVREAEKSLKIMEAM 459
G ++ E E ++ + M
Sbjct: 356 GTDFMSKGNEQESMARLKKLM 376
>UNIPROTKB|F2Z5M9 [details] [associations]
symbol:SRP54 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043021 "ribonucleoprotein complex binding"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0030942 "endoplasmic reticulum signal peptide binding"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA] [GO:0008144
"drug binding" evidence=IEA] [GO:0005786 "signal recognition
particle, endoplasmic reticulum targeting" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0008312 "7S RNA binding"
evidence=IEA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
HAMAP:MF_00306 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005634 GO:GO:0042493 GO:GO:0008144
GO:GO:0003924 GO:GO:0043021 GO:GO:0019003 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786 KO:K03106
Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425 GO:GO:0030942
CTD:6729 GeneTree:ENSGT00550000074824 OMA:GQQVVKI EMBL:CU469145
RefSeq:XP_001927834.3 ProteinModelPortal:F2Z5M9 SMR:F2Z5M9
PRIDE:F2Z5M9 Ensembl:ENSSSCT00000002187 GeneID:100154361
KEGG:ssc:100154361 Uniprot:F2Z5M9
Length = 504
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 123/381 (32%), Positives = 213/381 (55%)
Query: 82 AEMFGQLTSGLEAAWNKLKGEETLTKENIVEPM-RDIRRALLEADVSLPVVRRFVQAVSE 140
A++ ++TS L + N T+ E ++ M +++ ALLEADV++ +V++ + V +
Sbjct: 4 ADLGRKITSALRSLSNA-----TIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENV-K 57
Query: 141 QAVGVG-LIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTV 199
A+ + + G+ + + V ELVKL+ V K + VI+ GLQG GKTT
Sbjct: 58 SAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTT 117
Query: 200 SAKLANYLKKQG-KSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGL 258
+KLA Y +++G K+C++ A D +R A DQL + +P Y + TE+ P IA +G+
Sbjct: 118 CSKLAYYYQRKGWKTCLICA-DTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGV 176
Query: 259 EEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTF 318
E+ K +N +++IVDT+GR + + ++ +E+ V + P ++ V+DA GQ A F
Sbjct: 177 EKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAF 236
Query: 319 NIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILG 378
++ + I+TKLDG ++GG ALS + PI +G GE ++D EPF ++LG
Sbjct: 237 KDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLG 296
Query: 379 MGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM 438
MGD+ ++K E ++ +D E + +K+ F D +Q + + +MG S+++GMIPG
Sbjct: 297 MGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGF 355
Query: 439 GKITPAQVREAEKSLKIMEAM 459
G ++ E E ++ + M
Sbjct: 356 GTDFMSKGNEQESMARLKKLM 376
>UNIPROTKB|Q4R965 [details] [associations]
symbol:SRP54 "Signal recognition particle 54 kDa protein"
species:9541 "Macaca fascicularis" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005786
"signal recognition particle, endoplasmic reticulum targeting"
evidence=ISS] [GO:0006184 "GTP catabolic process" evidence=ISS]
[GO:0008144 "drug binding" evidence=ISS] [GO:0008312 "7S RNA
binding" evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS]
[GO:0030942 "endoplasmic reticulum signal peptide binding"
evidence=ISS] [GO:0042493 "response to drug" evidence=ISS]
[GO:0045047 "protein targeting to ER" evidence=ISS] [GO:0003924
"GTPase activity" evidence=ISS] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR006325
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0005634 GO:GO:0042493
GO:GO:0016607 GO:GO:0008144 GO:GO:0003924 GO:GO:0006184
GO:GO:0019003 GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364
GO:GO:0045047 GO:GO:0005786 Gene3D:1.10.260.30 SUPFAM:SSF47446
TIGRFAMs:TIGR01425 GO:GO:0030942 HOVERGEN:HBG061072 EMBL:AB168231
ProteinModelPortal:Q4R965 SMR:Q4R965 PRIDE:Q4R965 Uniprot:Q4R965
Length = 504
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 123/381 (32%), Positives = 213/381 (55%)
Query: 82 AEMFGQLTSGLEAAWNKLKGEETLTKENIVEPM-RDIRRALLEADVSLPVVRRFVQAVSE 140
A++ ++TS L + N T+ E ++ M +++ ALLEADV++ +V++ + V +
Sbjct: 4 ADLGRKITSALRSLSNA-----TIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENV-K 57
Query: 141 QAVGVG-LIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTV 199
A+ + + G+ + + V ELVKL+ V K + VI+ GLQG GKTT
Sbjct: 58 SAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTT 117
Query: 200 SAKLANYLKKQG-KSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGL 258
+KLA Y +++G K+C++ A D +R A DQL + +P Y + TE+ P IA +G+
Sbjct: 118 CSKLAYYYQRKGWKTCLICA-DTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGV 176
Query: 259 EEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTF 318
E+ K +N +++IVDT+GR + + ++ +E+ V + P ++ V+DA GQ A F
Sbjct: 177 EKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAF 236
Query: 319 NIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILG 378
++ + I+TKLDG ++GG ALS + PI +G GE ++D EPF ++LG
Sbjct: 237 KDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLG 296
Query: 379 MGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM 438
MGD+ ++K E ++ +D E + +K+ F D +Q + + +MG S+++GMIPG
Sbjct: 297 MGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGF 355
Query: 439 GKITPAQVREAEKSLKIMEAM 459
G ++ E E ++ + M
Sbjct: 356 GTDFMSKGNEQESMARLKKLM 376
>UNIPROTKB|Q5R4R6 [details] [associations]
symbol:SRP54 "Signal recognition particle 54 kDa protein"
species:9601 "Pongo abelii" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005786 "signal recognition
particle, endoplasmic reticulum targeting" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=ISS] [GO:0008144 "drug
binding" evidence=ISS] [GO:0008312 "7S RNA binding" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] [GO:0030942 "endoplasmic
reticulum signal peptide binding" evidence=ISS] [GO:0042493
"response to drug" evidence=ISS] [GO:0045047 "protein targeting to
ER" evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0005634 GO:GO:0042493 GO:GO:0016607 GO:GO:0008144
GO:GO:0003924 GO:GO:0006184 GO:GO:0019003 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0045047 GO:GO:0005786 KO:K03106
Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425 GO:GO:0030942
CTD:6729 HOVERGEN:HBG061072 EMBL:CR861178 RefSeq:NP_001126912.1
UniGene:Pab.3814 ProteinModelPortal:Q5R4R6 SMR:Q5R4R6 PRIDE:Q5R4R6
GeneID:100173929 KEGG:pon:100173929 InParanoid:Q5R4R6
Uniprot:Q5R4R6
Length = 504
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 123/381 (32%), Positives = 213/381 (55%)
Query: 82 AEMFGQLTSGLEAAWNKLKGEETLTKENIVEPM-RDIRRALLEADVSLPVVRRFVQAVSE 140
A++ ++TS L + N T+ E ++ M +++ ALLEADV++ +V++ + V +
Sbjct: 4 ADLGRKITSALRSLSNA-----TIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENV-K 57
Query: 141 QAVGVG-LIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTV 199
A+ + + G+ + + V ELVKL+ V K + VI+ GLQG GKTT
Sbjct: 58 SAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTT 117
Query: 200 SAKLANYLKKQG-KSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGL 258
+KLA Y +++G K+C++ A D +R A DQL + +P Y + TE+ P IA +G+
Sbjct: 118 CSKLAYYYQRKGWKTCLICA-DTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGV 176
Query: 259 EEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTF 318
E+ K +N +++IVDT+GR + + ++ +E+ V + P ++ V+DA GQ A F
Sbjct: 177 EKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAF 236
Query: 319 NIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILG 378
++ + I+TKLDG ++GG ALS + PI +G GE ++D EPF ++LG
Sbjct: 237 KDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLG 296
Query: 379 MGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM 438
MGD+ ++K E ++ +D E + +K+ F D +Q + + +MG S+++GMIPG
Sbjct: 297 MGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGF 355
Query: 439 GKITPAQVREAEKSLKIMEAM 459
G ++ E E ++ + M
Sbjct: 356 GTDFMSKGNEQESMARLKKLM 376
>UNIPROTKB|E1C6G6 [details] [associations]
symbol:SRP54 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0008312 "7S RNA binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005786 "signal recognition particle, endoplasmic
reticulum targeting" evidence=IEA] [GO:0008144 "drug binding"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA] [GO:0030942
"endoplasmic reticulum signal peptide binding" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] [GO:0043021
"ribonucleoprotein complex binding" evidence=IEA] HAMAP:MF_00306
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0005634 GO:GO:0042493 GO:GO:0008144 GO:GO:0003924
GO:GO:0043021 GO:GO:0019003 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 GO:GO:0030942 CTD:6729
GeneTree:ENSGT00550000074824 OMA:GQQVVKI EMBL:AADN02003392
IPI:IPI00581279 RefSeq:XP_421238.1 ProteinModelPortal:E1C6G6
PRIDE:E1C6G6 Ensembl:ENSGALT00000016327 GeneID:423322
KEGG:gga:423322 NextBio:20825811 Uniprot:E1C6G6
Length = 504
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 122/381 (32%), Positives = 213/381 (55%)
Query: 82 AEMFGQLTSGLEAAWNKLKGEETLTKENIVEPM-RDIRRALLEADVSLPVVRRFVQAVSE 140
A++ ++TS L + N T+ E ++ M +++ ALLEADV++ +V++ + V +
Sbjct: 4 ADLGRKITSALRSLSNA-----TIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENV-K 57
Query: 141 QAVGVG-LIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTV 199
A+ + + G+ + + V ELVKL+ V K + +I+ GLQG GKTT
Sbjct: 58 SAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNIIMFVGLQGSGKTTT 117
Query: 200 SAKLANYLKKQG-KSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGL 258
+KLA + +++G K+C++ A D YR A DQL + +P Y + TE+ P IA +G+
Sbjct: 118 CSKLAYFYQRKGWKTCLICA-DTYRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGV 176
Query: 259 EEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTF 318
E+ K +N +++IVDT+GR + + ++ +E+ V + P ++ V+DA GQ A F
Sbjct: 177 EKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAF 236
Query: 319 NIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILG 378
++ + I+TKLDG ++GG ALS + PI +G GE ++D EPF ++LG
Sbjct: 237 KDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLG 296
Query: 379 MGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM 438
MGD+ ++K E ++ +D E + +K+ F D +Q + + +MG S+++GMIPG
Sbjct: 297 MGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGF 355
Query: 439 GKITPAQVREAEKSLKIMEAM 459
G ++ E E ++ + M
Sbjct: 356 GTDFMSKGNEQESMARLKKLM 376
>RGD|2323636 [details] [associations]
symbol:Fam177a1 "family with sequence similarity 177, member A1"
species:10116 "Rattus norvegicus" [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0008312 "7S RNA binding" evidence=IEA]
[GO:0048500 "signal recognition particle" evidence=IEA]
HAMAP:MF_00306 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
RGD:2323636 GO:GO:0005525 GO:GO:0003924 GO:GO:0006184 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 GeneTree:ENSGT00550000074824
IPI:IPI00387699 PRIDE:F1M7P5 Ensembl:ENSRNOT00000052076
ArrayExpress:F1M7P5 Uniprot:F1M7P5
Length = 500
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 122/381 (32%), Positives = 213/381 (55%)
Query: 82 AEMFGQLTSGLEAAWNKLKGEETLTKENIVEPM-RDIRRALLEADVSLPVVRRFVQAVSE 140
A++ ++TS L + N T+ E ++ M +++ ALLEADV++ +V++ + V +
Sbjct: 4 ADLGRKITSALRSLSNA-----TIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENV-K 57
Query: 141 QAVGVG-LIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTV 199
A+ + + G+ + + V ELVKL+ V K + VI+ GLQG GKTT
Sbjct: 58 SAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTT 117
Query: 200 SAKLANYLKKQG-KSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGL 258
+KLA + +++G K+C++ A D +R A DQL + +P Y + TE+ P IA +G+
Sbjct: 118 CSKLAYFYQRKGWKTCLICA-DTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGV 176
Query: 259 EEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTF 318
E+ K +N +++IVDT+GR + + ++ +E+ V + P ++ V+DA GQ A F
Sbjct: 177 EKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEAQAKAF 236
Query: 319 NIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILG 378
++ + I+TKLDG ++GG ALS + PI +G GE ++D EPF ++LG
Sbjct: 237 KDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLG 296
Query: 379 MGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM 438
MGD+ ++K E ++ +D E + +K+ F D +Q + + +MG S+++GMIPG
Sbjct: 297 MGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGF 355
Query: 439 GKITPAQVREAEKSLKIMEAM 459
G ++ E E ++ + M
Sbjct: 356 GTDFMSKGNEQESMARLKKLM 376
>RGD|621390 [details] [associations]
symbol:Srp54 "signal recognition particle 54A" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003924 "GTPase activity" evidence=IEA;ISO] [GO:0005525 "GTP
binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005786 "signal recognition particle, endoplasmic
reticulum targeting" evidence=IEA;ISO] [GO:0006184 "GTP catabolic
process" evidence=ISO] [GO:0006614 "SRP-dependent cotranslational
protein targeting to membrane" evidence=IEA] [GO:0008144 "drug
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008312 "7S RNA binding" evidence=IEA;ISO]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0019003 "GDP binding"
evidence=IEA;ISO] [GO:0030942 "endoplasmic reticulum signal peptide
binding" evidence=IEA;ISO] [GO:0042493 "response to drug"
evidence=IEA;ISO] [GO:0043021 "ribonucleoprotein complex binding"
evidence=IEA;ISO] [GO:0045047 "protein targeting to ER"
evidence=ISO] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
RGD:621390 GO:GO:0005525 GO:GO:0042493 GO:GO:0016607 GO:GO:0008144
GO:GO:0003924 GO:GO:0043021 GO:GO:0019003 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786 eggNOG:COG0541
HOGENOM:HOG000036165 KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446
TIGRFAMs:TIGR01425 GO:GO:0030942 CTD:6729 HOVERGEN:HBG061072
OMA:GQQVVKI EMBL:BC079117 IPI:IPI00391089 RefSeq:NP_446323.1
UniGene:Rn.24880 ProteinModelPortal:Q6AYB5 SMR:Q6AYB5 STRING:Q6AYB5
PRIDE:Q6AYB5 Ensembl:ENSRNOT00000049937 GeneID:116650
KEGG:rno:116650 UCSC:RGD:621390 InParanoid:Q6AYB5 NextBio:619403
ArrayExpress:Q6AYB5 Genevestigator:Q6AYB5
GermOnline:ENSRNOG00000032776 Uniprot:Q6AYB5
Length = 504
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 122/381 (32%), Positives = 213/381 (55%)
Query: 82 AEMFGQLTSGLEAAWNKLKGEETLTKENIVEPM-RDIRRALLEADVSLPVVRRFVQAVSE 140
A++ ++TS L + N T+ E ++ M +++ ALLEADV++ +V++ + V +
Sbjct: 4 ADLGRKITSALRSLSNA-----TIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENV-K 57
Query: 141 QAVGVG-LIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTV 199
A+ + + G+ + + V ELVKL+ V K + VI+ GLQG GKTT
Sbjct: 58 SAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTT 117
Query: 200 SAKLANYLKKQG-KSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGL 258
+KLA + +++G K+C++ A D +R A DQL + +P Y + TE+ P IA +G+
Sbjct: 118 CSKLAYFYQRKGWKTCLICA-DTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGV 176
Query: 259 EEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTF 318
E+ K +N +++IVDT+GR + + ++ +E+ V + P ++ V+DA GQ A F
Sbjct: 177 EKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEAQAKAF 236
Query: 319 NIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILG 378
++ + I+TKLDG ++GG ALS + PI +G GE ++D EPF ++LG
Sbjct: 237 KDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLG 296
Query: 379 MGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM 438
MGD+ ++K E ++ +D E + +K+ F D +Q + + +MG S+++GMIPG
Sbjct: 297 MGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGF 355
Query: 439 GKITPAQVREAEKSLKIMEAM 459
G ++ E E ++ + M
Sbjct: 356 GTDFMSKGNEQESMARLKKLM 376
>ZFIN|ZDB-GENE-040426-818 [details] [associations]
symbol:srp54 "signal recognition particle 54"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0048500 "signal recognition particle"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008312 "7S RNA
binding" evidence=IEA] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR006325
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 ZFIN:ZDB-GENE-040426-818 GO:GO:0005525 GO:GO:0003924
GO:GO:0006184 GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364
eggNOG:COG0541 HOGENOM:HOG000036165 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 CTD:6729
GeneTree:ENSGT00550000074824 HOVERGEN:HBG061072 OMA:GQQVVKI
OrthoDB:EOG45MN54 GO:GO:0048500 HSSP:P70722 EMBL:BX088587
EMBL:BC045474 EMBL:BC067588 IPI:IPI00483938 RefSeq:NP_957282.1
UniGene:Dr.7990 SMR:Q7ZVN5 STRING:Q7ZVN5 Ensembl:ENSDART00000018678
Ensembl:ENSDART00000133424 GeneID:393963 KEGG:dre:393963
InParanoid:Q7ZVN5 NextBio:20814934 Uniprot:Q7ZVN5
Length = 504
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 123/381 (32%), Positives = 212/381 (55%)
Query: 82 AEMFGQLTSGLEAAWNKLKGEETLTKENIVEPM-RDIRRALLEADVSLPVVRRFVQAVSE 140
A++ ++TS L + N T+ E ++ M +++ ALLEADV++ +V++ + V +
Sbjct: 4 ADLGRKITSALRSLSNA-----TIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENV-K 57
Query: 141 QAVGVG-LIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTV 199
A+ + + G+ + + V ELVKL+ V K + VI+ GLQG GKTT
Sbjct: 58 AAIDLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTT 117
Query: 200 SAKLANYLKKQG-KSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGL 258
+KLA Y +++G K+C++ A D +R A DQL + +P Y + TE+ P IA +G+
Sbjct: 118 CSKLAYYFQRKGWKTCLICA-DTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIAAEGV 176
Query: 259 EEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTF 318
E+ K +N +++IVDT+GR + + ++ +E+ V + P ++ V+DA GQ A F
Sbjct: 177 EKFKSENFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQAKAF 236
Query: 319 NIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILG 378
++ + I+TKLDG ++GG ALS + PI +G GE ++D EPF ++LG
Sbjct: 237 KDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLG 296
Query: 379 MGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM 438
MGD+ ++K E ++ +D EE+ K+ F D +Q + + +MG +++GMIPG
Sbjct: 297 MGDIEGLIDKVNE-LKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGF 355
Query: 439 GKITPAQVREAEKSLKIMEAM 459
G ++ E E ++ + M
Sbjct: 356 GTDFMSKGNEQESMARLKKLM 376
>SGD|S000006292 [details] [associations]
symbol:SRP54 "Signal recognition particle (SRP) subunit
(homolog of mammalian SRP54)" species:4932 "Saccharomyces
cerevisiae" [GO:0008312 "7S RNA binding" evidence=IEA;IDA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA;IMP] [GO:0006617 "SRP-dependent
cotranslational protein targeting to membrane, signal sequence
recognition" evidence=IC;ISA] [GO:0005525 "GTP binding"
evidence=IEA;ISA] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0005048 "signal sequence binding" evidence=IPI] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005096 "GTPase activator activity"
evidence=IEA] [GO:0048500 "signal recognition particle"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0045047
"protein targeting to ER" evidence=IPI] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=IEA;IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 SGD:S000006292
GO:GO:0005525 GO:GO:0005096 GO:GO:0043547 GO:GO:0003924
GO:GO:0006184 EMBL:BK006949 EMBL:U51033 GO:GO:0005048 GO:GO:0008312
SUPFAM:SSF47364 GO:GO:0005786 GO:GO:0006617 eggNOG:COG0541
HOGENOM:HOG000036165 KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446
TIGRFAMs:TIGR01425 GeneTree:ENSGT00550000074824 OrthoDB:EOG4TMV9N
EMBL:X16908 EMBL:M55517 EMBL:X51614 PIR:S69073 RefSeq:NP_015413.1
ProteinModelPortal:P20424 SMR:P20424 DIP:DIP-2943N IntAct:P20424
MINT:MINT-484768 STRING:P20424 PaxDb:P20424 PeptideAtlas:P20424
EnsemblFungi:YPR088C GeneID:856203 KEGG:sce:YPR088C CYGD:YPR088c
OMA:TAGRHKE NextBio:981405 Genevestigator:P20424 GermOnline:YPR088C
Uniprot:P20424
Length = 541
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 130/392 (33%), Positives = 210/392 (53%)
Query: 82 AEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQ 141
A++ ++ S + A + + + T T +++ ++ I ALLE+DV++ +V + + Q
Sbjct: 4 ADLGKRINSAVNNAISNTQDDFT-TSVDVM--LKGIVTALLESDVNIALVSKLRNNIRSQ 60
Query: 142 AVGVGLIRGVRPDQQLVKIVR----DELVKLM---GGEVSELVFAKSRPTVILLAGLQGV 194
+ + Q K+++ DEL KL+ G E V K + +I+ GLQG
Sbjct: 61 LLSENRSEKSTTNAQTKKLIQKTVFDELCKLVTCEGSEEKAFVPKKRKTNIIMFVGLQGS 120
Query: 195 GKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIA 254
GKTT KLA Y K+G LV D +R A DQL + +P Y + TE P+++A
Sbjct: 121 GKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYTETDPAKVA 180
Query: 255 KQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAAL 314
++G+ + KK+ D++IVDT+GR ++ + E+ ++ V+ P + ++V+DA GQ A
Sbjct: 181 EEGINKFKKEKFDIIIVDTSGRHHQEEELFQEMIEISNVIKPNQTIMVLDASIGQAAEQQ 240
Query: 315 VTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAG 374
F ILTK+DG +RGG A+S + PI +G GE + DLE F P
Sbjct: 241 SKAFKESSDFGAIILTKMDGHARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFIS 300
Query: 375 RILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGM 434
++LG+GD+ S E+ Q V +EDA+ + I F DF KQ +T+ +MG +S + M
Sbjct: 301 KLLGIGDIESLFEQLQTVSNKEDAKATMENIQKGKFTLLDFKKQMQTIMKMGPLSNIAQM 360
Query: 435 IPGMGKITPAQVREAEKSLKI--MEAMIEAMT 464
IPGM + QV E E S K+ M ++++MT
Sbjct: 361 IPGMSNMMN-QVGEEETSQKMKKMVYVLDSMT 391
>WB|WBGene00009012 [details] [associations]
symbol:F21D5.7 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008312 "7S
RNA binding" evidence=IEA] [GO:0048500 "signal recognition
particle" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] HAMAP:MF_00306 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0006915 GO:GO:0002119 GO:GO:0003924
GO:GO:0006184 GO:GO:0000003 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 EMBL:Z68161 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 GeneTree:ENSGT00550000074824
OMA:GQQVVKI GO:GO:0048500 EMBL:Z54271 PIR:A88763 PIR:T21140
RefSeq:NP_501507.1 HSSP:P70722 ProteinModelPortal:G5EE80 SMR:G5EE80
EnsemblMetazoa:F21D5.7.1 EnsemblMetazoa:F21D5.7.2 GeneID:259584
KEGG:cel:CELE_F21D5.7 CTD:259584 WormBase:F21D5.7 NextBio:952170
Uniprot:G5EE80
Length = 496
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 117/374 (31%), Positives = 208/374 (55%)
Query: 95 AWNKLKGEETLTKENIVEPM-RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRP 153
A KL G+ T+ E ++ M +++ AL+E+DV + +V++ V + ++ G
Sbjct: 13 AIGKL-GQSTVINEGELDLMLKEVCTALIESDVHIRLVKQLKDNVKKAINFEEIVGGANK 71
Query: 154 DQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQG-K 212
+ + K V +EL+KL+ V+ K R V + GLQG GKTT K+A Y +++G K
Sbjct: 72 RRYIQKTVFNELLKLVDPGVTPFTPTKGRRNVFMFVGLQGSGKTTTCTKMAYYYQRKGWK 131
Query: 213 SCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVD 272
+C++ A D +R A DQL + +P Y + +E+ P +IA +G+E+ ++ +++IVD
Sbjct: 132 TCLICA-DTFRAGAFDQLKQNATKARIPFYGSYSEIDPVKIAAEGVEKFTQEGFEIIIVD 190
Query: 273 TAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKL 332
T+GR + + ++ +E+ V + P V+ V+DA GQ A F+ + + I+TKL
Sbjct: 191 TSGRHKQEASLFEEMLQVSNAVTPDNVVFVMDASIGQACEAQARAFSQTVDVASVIITKL 250
Query: 333 DGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEV 392
D ++GG ALS V+ P+ +G GE ++D E F P ++LGMGD+ V+ ++
Sbjct: 251 DSHAKGGGALSAVAVTKSPVIFIGTGEHIDDFEIFKPKSFVQKLLGMGDIAGLVDMVNDI 310
Query: 393 MQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK--ITPAQVREAE 450
Q D +E+ ++ F D +Q + + +MG S+++GMIPG G +T +E+
Sbjct: 311 GIQ-DNKELVGRLKQGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFGSEFMTKGNEQESV 369
Query: 451 KSLKIMEAMIEAMT 464
LK M ++++M+
Sbjct: 370 NRLKRMMTVMDSMS 383
>TAIR|locus:2028563 [details] [associations]
symbol:AT1G48900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003729 "mRNA
binding" evidence=ISS] [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=ISS] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0006617 "SRP-dependent
cotranslational protein targeting to membrane, signal sequence
recognition" evidence=ISS] [GO:0008312 "7S RNA binding"
evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0048500 "signal recognition particle"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0010267
"production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0051607 "defense response to
virus" evidence=RCA] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0003924 GO:GO:0006184 EMBL:AC084414 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786 eggNOG:COG0541
HOGENOM:HOG000036165 KO:K03106 ProtClustDB:CLSN2686827
Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425 EMBL:U12127
EMBL:AY054273 EMBL:AY052331 EMBL:AF446864 IPI:IPI00531486
PIR:G96526 RefSeq:NP_564535.1 UniGene:At.23838
ProteinModelPortal:P49967 SMR:P49967 STRING:P49967 PaxDb:P49967
PRIDE:P49967 EnsemblPlants:AT1G48900.1 GeneID:841312
KEGG:ath:AT1G48900 GeneFarm:1889 TAIR:At1g48900 InParanoid:P49967
OMA:NVQHMSK PhylomeDB:P49967 Genevestigator:P49967
GermOnline:AT1G48900 Uniprot:P49967
Length = 495
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 119/386 (30%), Positives = 209/386 (54%)
Query: 82 AEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQ 141
AE+ G++T ++ ++ + ++ + E + +I RALL++DVS P+V+ +Q+ ++
Sbjct: 4 AELGGRITRAIQ----QMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKE-MQSNIKK 58
Query: 142 AVGV-GLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVS 200
V + L G + + + + EL K++ K++ +V++ GLQG GKTT
Sbjct: 59 IVNLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTC 118
Query: 201 AKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEE 260
K A Y +K+G LV D +R A DQL + +P Y + TE P +IA +G++
Sbjct: 119 TKYAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDT 178
Query: 261 AKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNI 320
KK+N D++IVDT+GR + + ++ +E++ V P V+ V+D+ GQ A F
Sbjct: 179 FKKENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQ 238
Query: 321 EIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMG 380
+ + I+TK+DG ++GG ALS + P+ +G GE M++ E F R+LGMG
Sbjct: 239 SVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 298
Query: 381 DVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG- 439
D FV+K QEV+ ++ E+ +K+ NF Q + + MG + V M+PG+
Sbjct: 299 DWSGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISA 358
Query: 440 KITP-AQVREAEKSLKIMEAMIEAMT 464
++ P +E++ +K M+++MT
Sbjct: 359 EMMPKGHEKESQAKIKRYMTMMDSMT 384
>POMBASE|SPCC188.06c [details] [associations]
symbol:srp54 "signal recognition particle subunit Srp54"
species:4896 "Schizosaccharomyces pombe" [GO:0003924 "GTPase
activity" evidence=IMP] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0005786
"signal recognition particle, endoplasmic reticulum targeting"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IMP] [GO:0008312 "7S RNA binding" evidence=IMP]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 PomBase:SPCC188.06c
GO:GO:0005525 GO:GO:0005783 GO:GO:0005829 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003924 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 eggNOG:COG0541 HOGENOM:HOG000036165
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425
OMA:GQQVVKI EMBL:X51613 EMBL:M55518 PIR:A33644 RefSeq:NP_588209.1
ProteinModelPortal:P21565 MINT:MINT-4687605 STRING:P21565
PRIDE:P21565 EnsemblFungi:SPCC188.06c.1 GeneID:2539290
KEGG:spo:SPCC188.06c OrthoDB:EOG4TMV9N NextBio:20800457
Uniprot:P21565
Length = 522
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 125/384 (32%), Positives = 207/384 (53%)
Query: 84 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAV 143
+F L L +A ++ +E + +++I ALLE DV++ +V+ + ++
Sbjct: 2 VFADLGRRLNSALGDFSKATSVNEELVDTLLKNICTALLETDVNVRLVQELRSNIKKKIN 61
Query: 144 GVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKL 203
L +G+ + + K V DEL L+ +V K RP+VI++ GLQG GKTT +KL
Sbjct: 62 VSTLPQGINGKRIVQKAVFDELCSLVDPKVDAFTPKKGRPSVIMMVGLQGSGKTTTCSKL 121
Query: 204 ANYLKKQG-KSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAK 262
A + +++G KSC LVA D +R A DQL + VP + + TE P IAK+G+++ K
Sbjct: 122 ALHYQRRGLKSC-LVAADTFRAGAFDQLKQNAIKARVPYFGSYTETDPVVIAKEGVDKFK 180
Query: 263 KKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEI 322
DV+IVDT+GR Q ++ + E+ ++ + P + ++++DA GQ A + F
Sbjct: 181 NDRFDVIIVDTSGRHQQEQELFAEMVEISDAIRPDQTIMILDASIGQAAESQSKAFKETA 240
Query: 323 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
I+TKLDG ++GG ALS + PI +G GE + DLE F P ++LG+GD+
Sbjct: 241 DFGAVIITKLDGHAKGGGALSAVAATKTPIVFIGTGEHINDLERFSPRSFISKLLGLGDL 300
Query: 383 LSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKIT 442
+E Q + D + M K + F DF Q + ++G +S++ MIPGM +
Sbjct: 301 EGLMEHVQSL--DFDKKNMVKNLEQGKFTVRDFRDQLGNIMKLGPLSKMASMIPGMSNMM 358
Query: 443 PAQVREAEKSLKI--MEAMIEAMT 464
+ + E SL++ M ++++MT
Sbjct: 359 NG-MNDEEGSLRMKRMLYIVDSMT 381
>FB|FBgn0010747 [details] [associations]
symbol:Srp54k "Signal recognition particle protein 54k"
species:7227 "Drosophila melanogaster" [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=ISS] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=ISS] [GO:0008312 "7S RNA binding"
evidence=ISS] [GO:0006617 "SRP-dependent cotranslational protein
targeting to membrane, signal sequence recognition" evidence=ISS]
[GO:0005048 "signal sequence binding" evidence=ISS] [GO:0005525
"GTP binding" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] HAMAP:MF_00306 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 GO:GO:0006184 GO:GO:0005048
GO:GO:0008312 SUPFAM:SSF47364 GO:GO:0005786 GO:GO:0006617
eggNOG:COG0541 Gene3D:1.10.260.30 SUPFAM:SSF47446
TIGRFAMs:TIGR01425 HSSP:P70722 EMBL:AY094660
ProteinModelPortal:Q8T3P8 SMR:Q8T3P8 STRING:Q8T3P8 PaxDb:Q8T3P8
PRIDE:Q8T3P8 FlyBase:FBgn0010747 InParanoid:Q8T3P8
OrthoDB:EOG44TMQ3 ChiTaRS:Srp54k ArrayExpress:Q8T3P8 Bgee:Q8T3P8
Uniprot:Q8T3P8
Length = 569
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 119/376 (31%), Positives = 206/376 (54%)
Query: 92 LEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGV 151
+ A + L + +E + +++I ALLEADV++ +V++ + V + G+
Sbjct: 10 ITTALHSLSKATVINEEALNSMLKEICAALLEADVNIRLVKQLRENVRAVIDFDEMAGGL 69
Query: 152 RPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA-NYLKKQ 210
+ + V ELVKL+ V K + V++ GLQG GKTT KLA +Y K+
Sbjct: 70 NKRRMIQSAVFKELVKLVDPGVKPYQPIKGKANVVMFVGLQGSGKTTTCTKLAYHYQKRN 129
Query: 211 GKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVI 270
KSC LV D +R A DQ+ + +P Y + TE+ P IA+ G++ K++ +++I
Sbjct: 130 WKSC-LVCADTFRAGAYDQVKQNATKARIPFYGSYTEIDPVVIAQDGVDMFKREGFEMII 188
Query: 271 VDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILT 330
VDT+GR + ++++ +E+ V ++P ++ V+DA GQ A F ++ I I+T
Sbjct: 189 VDTSGRHKQEESLFEEMLAVSNAVSPDNIIFVMDATIGQACEAQAKAFKDKVDIGSVIIT 248
Query: 331 KLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQ 390
KLDG ++GG ALS + PI +G GE ++DLEPF ++LGMGD+ ++K
Sbjct: 249 KLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGDIEGLIDKVN 308
Query: 391 EVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK--ITPAQVRE 448
E ++ + +E+ +KI +F D +Q + + +MG S+ + MIPG + +T +E
Sbjct: 309 E-LKLDGNDELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQFMNMIPGFSQDFMTKGGEQE 367
Query: 449 AEKSLKIMEAMIEAMT 464
+ +K M M+++M+
Sbjct: 368 SMARVKRMMTMMDSMS 383
>GENEDB_PFALCIPARUM|PF14_0477 [details] [associations]
symbol:PF14_0477 "signal recognition particle
54 kDa protein, putative" species:5833 "Plasmodium falciparum"
[GO:0005048 "signal sequence binding" evidence=ISS] HAMAP:MF_00306
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0003924 GO:GO:0006184 EMBL:AE014187 GO:GO:0005048
GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364 HOGENOM:HOG000036165
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425
GO:GO:0048500 HSSP:P70722 RefSeq:XP_001348651.1
ProteinModelPortal:Q8IKX4 EnsemblProtists:PF14_0477:mRNA
GeneID:812059 KEGG:pfa:PF14_0477 EuPathDB:PlasmoDB:PF3D7_1450100
OMA:QMANALP ProtClustDB:CLSZ2514463 Uniprot:Q8IKX4
Length = 500
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 118/381 (30%), Positives = 199/381 (52%)
Query: 87 QLTSGLEAAWNKLKGEETLTKENIVEP-MRDIRRALLEADVSLPVVRRFVQAVSEQAVGV 145
+L + + A+ KL+ TL + ++E +++I RAL+ +D+++ ++ +
Sbjct: 5 ELGTQITNAFRKLQ-TSTLADDVVIEECLKEIIRALILSDINVSYLKDIKSNIKNNIEKN 63
Query: 146 GLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLAN 205
I G + + K V +EL+KL+ G+ K + VIL GLQG GKTT K A+
Sbjct: 64 IDIYGNNKKKLVQKYVVEELIKLLEGKKEGYNPVKGKRNVILFVGLQGSGKTTTCTKYAH 123
Query: 206 YLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKN 265
Y +K+G LV D +R A DQL +V +P Y + +EV P +IA G+ K
Sbjct: 124 YYQKKGFKTALVCADTFRAGAFDQLKQNAAKVKIPFYGSYSEVDPVKIATDGVNAFLKDK 183
Query: 266 VDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGIT 325
D++IVD++GR + + + +E+ V+ + P E++ V+D+ GQ F + +
Sbjct: 184 YDLIIVDSSGRHKQENELFEEMIQVENSIQPEEIIFVIDSHIGQSCHDQAMAFKNSVSLG 243
Query: 326 GAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSF 385
I+TK+DG ++GG ALS +G PI +G GE + D E F R+LG+GD+
Sbjct: 244 SIIITKIDGHAKGGGALSAVAATGCPITFIGTGEHVNDFEKFEAKSFVSRLLGLGDISGL 303
Query: 386 VEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK--ITP 443
V +EV+ + E+ ++ F D Q + V +MGS+S+V+ MIPG G I+
Sbjct: 304 VSTIKEVIDIDKQPELMNRLSKGKFVLRDMYDQFQNVFKMGSLSKVMSMIPGFGNNLISK 363
Query: 444 AQVREAEKSLKIMEAMIEAMT 464
+E +K ++++MT
Sbjct: 364 GTEKEGIDKIKKFMVIMDSMT 384
>UNIPROTKB|Q8IKX4 [details] [associations]
symbol:PF14_0477 "Signal recognition particle SRP54,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005048
"signal sequence binding" evidence=ISS] HAMAP:MF_00306
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0003924 GO:GO:0006184 EMBL:AE014187 GO:GO:0005048
GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364 HOGENOM:HOG000036165
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425
GO:GO:0048500 HSSP:P70722 RefSeq:XP_001348651.1
ProteinModelPortal:Q8IKX4 EnsemblProtists:PF14_0477:mRNA
GeneID:812059 KEGG:pfa:PF14_0477 EuPathDB:PlasmoDB:PF3D7_1450100
OMA:QMANALP ProtClustDB:CLSZ2514463 Uniprot:Q8IKX4
Length = 500
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 118/381 (30%), Positives = 199/381 (52%)
Query: 87 QLTSGLEAAWNKLKGEETLTKENIVEP-MRDIRRALLEADVSLPVVRRFVQAVSEQAVGV 145
+L + + A+ KL+ TL + ++E +++I RAL+ +D+++ ++ +
Sbjct: 5 ELGTQITNAFRKLQ-TSTLADDVVIEECLKEIIRALILSDINVSYLKDIKSNIKNNIEKN 63
Query: 146 GLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLAN 205
I G + + K V +EL+KL+ G+ K + VIL GLQG GKTT K A+
Sbjct: 64 IDIYGNNKKKLVQKYVVEELIKLLEGKKEGYNPVKGKRNVILFVGLQGSGKTTTCTKYAH 123
Query: 206 YLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKN 265
Y +K+G LV D +R A DQL +V +P Y + +EV P +IA G+ K
Sbjct: 124 YYQKKGFKTALVCADTFRAGAFDQLKQNAAKVKIPFYGSYSEVDPVKIATDGVNAFLKDK 183
Query: 266 VDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGIT 325
D++IVD++GR + + + +E+ V+ + P E++ V+D+ GQ F + +
Sbjct: 184 YDLIIVDSSGRHKQENELFEEMIQVENSIQPEEIIFVIDSHIGQSCHDQAMAFKNSVSLG 243
Query: 326 GAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSF 385
I+TK+DG ++GG ALS +G PI +G GE + D E F R+LG+GD+
Sbjct: 244 SIIITKIDGHAKGGGALSAVAATGCPITFIGTGEHVNDFEKFEAKSFVSRLLGLGDISGL 303
Query: 386 VEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK--ITP 443
V +EV+ + E+ ++ F D Q + V +MGS+S+V+ MIPG G I+
Sbjct: 304 VSTIKEVIDIDKQPELMNRLSKGKFVLRDMYDQFQNVFKMGSLSKVMSMIPGFGNNLISK 363
Query: 444 AQVREAEKSLKIMEAMIEAMT 464
+E +K ++++MT
Sbjct: 364 GTEKEGIDKIKKFMVIMDSMT 384
>UNIPROTKB|G3V4F7 [details] [associations]
symbol:SRP54 "Signal recognition particle 54 kDa protein"
species:9606 "Homo sapiens" [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0008312 "7S RNA binding" evidence=IEA]
[GO:0048500 "signal recognition particle" evidence=IEA]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 Pfam:PF00448 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 GO:GO:0005525 GO:GO:0003924
GO:GO:0006184 GO:GO:0008312 GO:GO:0006614 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 GO:GO:0048500 EMBL:AL049776
HGNC:HGNC:11301 ChiTaRS:SRP54 ProteinModelPortal:G3V4F7 SMR:G3V4F7
Ensembl:ENST00000555557 ArrayExpress:G3V4F7 Bgee:G3V4F7
Uniprot:G3V4F7
Length = 440
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 105/311 (33%), Positives = 174/311 (55%)
Query: 150 GVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK 209
G+ + + V ELVKL+ V K + VI+ GLQG GKTT +KLA Y ++
Sbjct: 4 GLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLAYYYQR 63
Query: 210 QG-KSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDV 268
+G K+C++ A D +R A DQL + +P Y + TE+ P IA +G+E+ K +N ++
Sbjct: 64 KGWKTCLICA-DTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEI 122
Query: 269 VIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAI 328
+IVDT+GR + + ++ +E+ V + P ++ V+DA GQ A F ++ + I
Sbjct: 123 IIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKVDVASVI 182
Query: 329 LTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEK 388
+TKLDG ++GG ALS + PI +G GE ++D EPF ++LGMGD+ ++K
Sbjct: 183 VTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDIEGLIDK 242
Query: 389 AQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVRE 448
E ++ +D E + +K+ F D +Q + + +MG S+++GMIPG G ++ E
Sbjct: 243 VNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFMSKGNE 301
Query: 449 AEKSLKIMEAM 459
E ++ + M
Sbjct: 302 QESMARLKKLM 312
>DICTYBASE|DDB_G0275455 [details] [associations]
symbol:srp54 "signal recognition particle 54 kDa
subunit" species:44689 "Dictyostelium discoideum" [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0048500 "signal recognition
particle" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0008312 "7S RNA binding" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005786 "signal recognition particle, endoplasmic reticulum
targeting" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR006325
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 dictyBase:DDB_G0275455 GO:GO:0005525 GO:GO:0045335
GO:GO:0003924 GO:GO:0006184 GenomeReviews:CM000151_GR
EMBL:AAFI02000013 GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364
GO:GO:0005786 eggNOG:COG0541 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 OMA:GQQVVKI RefSeq:XP_643640.1
HSSP:P61011 ProteinModelPortal:Q75K18 STRING:Q75K18
EnsemblProtists:DDB0232373 GeneID:8620227 KEGG:ddi:DDB_G0275455
Uniprot:Q75K18
Length = 542
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 111/384 (28%), Positives = 206/384 (53%)
Query: 82 AEMFGQLTSGLEAAWNKLKGEETLTKENIVEPM-RDIRRALLEADVSLPVVRRFVQAVSE 140
A++ QL+S L + E T+ E+ + + +++ AL ++DVS+ ++ + + + +
Sbjct: 4 ADLGNQLSSALRSL-----NETTIVNEDTINQLLKEVGNALSKSDVSMSLIIQMRKNIKD 58
Query: 141 QAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVS 200
+ + G+ + + ++V DEL++L+ V K + +++ GLQG GKTT
Sbjct: 59 KIKLDQMAAGLNKRKIIKQVVFDELIRLLDPGVPLWKPTKGKSNIVMFVGLQGAGKTTSV 118
Query: 201 AKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEE 260
KLA + KK+G S +V D +R A DQ+ + + Y + TE P +A+ G++
Sbjct: 119 TKLAYFYKKKGFSTAIVCADTFRAGAFDQVRHNAAKAKIHYYGSETEKDPVVVARTGVDI 178
Query: 261 AKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNI 320
KK +++IVDT+GR + D + +E+K ++ + P + V+D+ GQ A T F
Sbjct: 179 FKKDGTEIIIVDTSGRHKQDSELFEEMKQIETAVKPDNCIFVMDSSIGQAAYEQATAFRS 238
Query: 321 EIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMG 380
+ + I+TK+DG+S GG A+S + PI +G GE + DLE F P ++LG G
Sbjct: 239 SVKVGSIIITKMDGNSMGGGAISAVAATNTPIIFIGTGEHLTDLELFDPSTFVSKLLGYG 298
Query: 381 DVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK 440
D+ +EK +EV+ ED+ + K+I F +Q + + ++G + +++ MIPGM +
Sbjct: 299 DMKGMLEKIKEVIP-EDSTSL-KEIAQGKFTLRSMQQQFQQIMQLGPIDKLVQMIPGMNQ 356
Query: 441 ITPAQVREAEKSLKIMEAMIEAMT 464
+ Q E LK ++++++
Sbjct: 357 LPQLQGNEGGLKLKAYINILDSLS 380
>CGD|CAL0003314 [details] [associations]
symbol:SRP54 species:5476 "Candida albicans" [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005048
"signal sequence binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0008312 "7S RNA binding" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] HAMAP:MF_00306 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
CGD:CAL0003314 GO:GO:0005525 GO:GO:0003924 GO:GO:0006184
EMBL:AACQ01000049 EMBL:AACQ01000048 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446
TIGRFAMs:TIGR01425 GO:GO:0048500 RefSeq:XP_717868.1
RefSeq:XP_717934.1 ProteinModelPortal:Q5A885 STRING:Q5A885
GeneID:3640377 GeneID:3640507 KEGG:cal:CaO19.10753
KEGG:cal:CaO19.3243 Uniprot:Q5A885
Length = 556
Score = 448 (162.8 bits), Expect = 5.3e-47, Sum P(2) = 5.3e-47
Identities = 102/302 (33%), Positives = 159/302 (52%)
Query: 167 KLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAA 226
K + G+ L +K VI+ GLQG GKTT KLA Y KK+G LV D +R A
Sbjct: 104 KTINGKKVRL--SKESSHVIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGA 161
Query: 227 IDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDE 286
DQL + +P Y + E P +IA +G+++ K++ D++IVDT+GR + ++ + E
Sbjct: 162 FDQLKQNAIKANIPYYGSYLEPDPVKIAFEGVQKFKQEKFDIIIVDTSGRHRQEEQLFTE 221
Query: 287 LKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKE 346
+ + + PT+ ++V+D GQ A + F ILTK+DG ++GG A+S
Sbjct: 222 MVQIGEAVQPTQTIMVMDGSIGQAAESQARAFKESSNFGSIILTKMDGHAKGGGAISAVA 281
Query: 347 VSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ--KK 404
+ PI +G GE + DLE F P ++LG+GD+ +E Q + +D Q +
Sbjct: 282 ATKTPIVFIGTGEHVGDLEIFKPTTFISKLLGIGDIQGLIEHVQSLNLHQDEGHKQTIEH 341
Query: 405 IMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKI--MEAMIEA 462
I F DF Q +MG ++ + MIPG+ I +QV + E S KI M ++++
Sbjct: 342 IKEGKFTLRDFQNQMNNFLKMGPLTNIASMIPGLSNIM-SQVGDEETSKKIKNMIYIMDS 400
Query: 463 MT 464
MT
Sbjct: 401 MT 402
Score = 61 (26.5 bits), Expect = 5.3e-47, Sum P(2) = 5.3e-47
Identities = 20/78 (25%), Positives = 40/78 (51%)
Query: 99 LKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIR---GVRPDQ 155
L E+ + + I + ++DI ALLE+DV++ +V + + + + + + +
Sbjct: 14 LSSVESGSDDEIQQMIKDICSALLESDVNVKLVAKLRGNIKNKIDESNVSKETSAMNKRK 73
Query: 156 QLVKIVRDELVKLMGGEV 173
+L KI+ DEL L+ V
Sbjct: 74 KLQKIIFDELCALVDSNV 91
>TIGR_CMR|CHY_1442 [details] [associations]
symbol:CHY_1442 "signal recognition particle-docking
protein FtsY" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0003924 "GTPase activity" evidence=ISS] [GO:0005047
"signal recognition particle binding" evidence=ISS] [GO:0009306
"protein secretion" evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300 SMART:SM00382
SMART:SM00962 SMART:SM00963 GO:GO:0005525 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003924 GO:GO:0031226
eggNOG:COG0552 KO:K03110 GO:GO:0006614 SUPFAM:SSF47364
TIGRFAMs:TIGR00064 RefSeq:YP_360274.1 ProteinModelPortal:Q3AC60
SMR:Q3AC60 STRING:Q3AC60 GeneID:3728659 KEGG:chy:CHY_1442
PATRIC:21276015 HOGENOM:HOG000036277 OMA:NRIPDEL
BioCyc:CHYD246194:GJCN-1441-MONOMER Uniprot:Q3AC60
Length = 303
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 108/277 (38%), Positives = 162/277 (58%)
Query: 100 KGEETLTKENIVEPMRD-IRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLV 158
K E+ K + E + + + L+E DV + V+ + + A R + +QL
Sbjct: 21 KIEDVFKKSTVDEELFEKLEEILIEGDVGVKPSLELVEKLRKTARE----RRITDSEQLK 76
Query: 159 KIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVA 218
+++++E++K++ ++L P VIL+ G+ GVGKTT KLA Y K+QGK +L A
Sbjct: 77 QVLKEEILKILEAGDNKLKNVPRTPLVILVVGVNGVGKTTTIGKLAYYFKQQGKQVLLAA 136
Query: 219 GDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQ 278
GD +R AAI+QL I G +VG PV P+ +A ++ A + +DV+I+DTAGRL
Sbjct: 137 GDTFRAAAIEQLEIWGNKVGCPVIKQKEGSDPAAVAFDAVKAAIARKIDVLIIDTAGRLH 196
Query: 279 IDKAMMDELKDVKRVLN------PTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKL 332
+M+EL+ VKRV+ P EVLLV+DA TGQ A + V FN + +TG +LTKL
Sbjct: 197 TKTNLMEELRKVKRVIERELPGAPDEVLLVLDATTGQNALSQVEYFNKALDLTGLVLTKL 256
Query: 333 DGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYP 369
DG ++GG + +K PIK +G GE+M+DL PF P
Sbjct: 257 DGTAKGGVIIGIKSSYQIPIKFIGVGEKMDDLRPFDP 293
>TAIR|locus:2037803 [details] [associations]
symbol:ATHSRP54A "signal recognition particle 54 kDa
subunit" species:3702 "Arabidopsis thaliana" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM;ISS] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=ISS] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0006617 "SRP-dependent
cotranslational protein targeting to membrane, signal sequence
recognition" evidence=ISS] [GO:0008312 "7S RNA binding"
evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0048500 "signal recognition particle"
evidence=IEA] [GO:0010267 "production of ta-siRNAs involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0051607
"defense response to virus" evidence=RCA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR006325
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0003924 GO:GO:0006184 EMBL:AC007591 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786 EMBL:L19997
EMBL:AF344329 EMBL:AY086187 IPI:IPI00526094 PIR:S42550
RefSeq:NP_563970.1 UniGene:At.24597 ProteinModelPortal:P37106
SMR:P37106 DIP:DIP-59002N STRING:P37106 PaxDb:P37106 PRIDE:P37106
EnsemblPlants:AT1G15310.1 GeneID:838100 KEGG:ath:AT1G15310
TAIR:At1g15310 eggNOG:COG0541 HOGENOM:HOG000036165
InParanoid:P37106 KO:K03106 OMA:KVIPPQM PhylomeDB:P37106
ProtClustDB:CLSN2686827 Genevestigator:P37106 GermOnline:AT1G15310
Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425
Uniprot:P37106
Length = 479
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 114/387 (29%), Positives = 200/387 (51%)
Query: 82 AEMFGQLTSGLEAAWNKLKGEETLTKENIVEP-MRDIRRALLEADVSLPVVRRFVQAVSE 140
AE+ G++T ++ N T+ E ++ + +I RALL++DVS +V + +Q +
Sbjct: 4 AELGGRITRAIQQMNNV-----TIIDEKVLNDFLNEITRALLQSDVSFGLVEK-MQTNIK 57
Query: 141 QAVGVG-LIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTV 199
+ V + L G + + + EL +++ K++P+V++ GLQG GKTT
Sbjct: 58 KIVNLDDLAAGHNKRLIIEQAIFKELCRMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTTT 117
Query: 200 SAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLE 259
K A Y +K+G LV D +R A DQL + +P Y + TE P +IA +G++
Sbjct: 118 CTKYAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVD 177
Query: 260 EAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFN 319
KK+ D++IVDT+GR + ++ +E++ V P V+ V+D+ GQ A F
Sbjct: 178 RFKKEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAFK 237
Query: 320 IEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGM 379
+ + I+TK+DG ++GG ALS + P+ +G GE M++ E F R+LG
Sbjct: 238 ETVSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGK 297
Query: 380 GDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG 439
GD V+K QEV+ ++ E+ + + NF Q + R+ ++++ M+PG+
Sbjct: 298 GDWSGLVDKLQEVVPKDLQNELVENLSQGNFTLRSMYDQFQCSLRI-PLNQLFSMLPGIS 356
Query: 440 -KITP-AQVREAEKSLKIMEAMIEAMT 464
++ P E+ +K M+++MT
Sbjct: 357 AEMMPKGHGEESRVKMKRYMTMMDSMT 383
>TAIR|locus:2157809 [details] [associations]
symbol:AT5G49500 "AT5G49500" species:3702 "Arabidopsis
thaliana" [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005525 "GTP
binding" evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005786 "signal recognition particle, endoplasmic reticulum
targeting" evidence=ISS] [GO:0006614 "SRP-dependent cotranslational
protein targeting to membrane" evidence=IEA] [GO:0006617
"SRP-dependent cotranslational protein targeting to membrane,
signal sequence recognition" evidence=ISS] [GO:0008312 "7S RNA
binding" evidence=IEA;ISS] [GO:0048500 "signal recognition
particle" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0051607 "defense response to
virus" evidence=RCA] InterPro:IPR000897 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00962 SMART:SM00963 GO:GO:0005525 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003924 GO:GO:0006184 EMBL:AB023033
GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786
eggNOG:COG0541 HOGENOM:HOG000036165 KO:K03106
ProtClustDB:CLSN2686827 Gene3D:1.10.260.30 SUPFAM:SSF47446
TIGRFAMs:TIGR01425 EMBL:U12126 IPI:IPI00534798 RefSeq:NP_199761.1
UniGene:At.29781 ProteinModelPortal:P49966 SMR:P49966 IntAct:P49966
STRING:P49966 PRIDE:P49966 GeneID:835010 KEGG:ath:AT5G49500
TAIR:At5g49500 InParanoid:P49966 Genevestigator:P49966
GermOnline:AT5G49500 Uniprot:P49966
Length = 497
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 109/388 (28%), Positives = 202/388 (52%)
Query: 82 AEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQ 141
AE+ G++ S ++ K+ + ++ + + + +I RALL++DVS P+V+ +Q ++
Sbjct: 4 AELGGRIMSAIQ----KMNNVTIIDEKALNDCLNEITRALLQSDVSFPLVKE-MQTNIKK 58
Query: 142 AVGV-GLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQG--VGKTT 198
V + L G + + + + EL K++ S K++P+V++ GLQG + K
Sbjct: 59 IVNLEDLAAGHNKRRIIEQAIFSELCKMLDPGKSAFAPKKAKPSVVMFVGLQGEVLEKPQ 118
Query: 199 VSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGL 258
+ + ++++G LV D +R A DQL + +P Y + T P +IA +G+
Sbjct: 119 LVPSMLIIIRRKGYKPALVCADTFRAGAFDQLKQNATKSKIPYYGSYTGSDPVKIAVEGV 178
Query: 259 EEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTF 318
+ KK+N D++IVDT+GR + ++ +E++ + P V+ V+D+ GQ A F
Sbjct: 179 DRFKKENCDLIIVDTSGRHKQQASLFEEMRQISEATKPDLVIFVMDSSIGQTAFEQARAF 238
Query: 319 NIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILG 378
+ + I+TK+DG ++GG LS + P+ +G GE M++ E F R+LG
Sbjct: 239 KQTVAVGAVIITKMDGHAKGGGTLSAVAATKSPVIFIGTGEHMDEFEVFDAKPFVSRLLG 298
Query: 379 MGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM 438
GD+ FV K QEV+ ++ E+ + + F Q + + MG + V M+PGM
Sbjct: 299 NGDMSGFVNKLQEVVPKDQQPELLEMLSHGKFTLRIMYDQFQNMLNMGPLKEVFSMLPGM 358
Query: 439 -GKITP-AQVREAEKSLKIMEAMIEAMT 464
++ P +E++ +K M+++MT
Sbjct: 359 RAEMMPEGHEKESQAKIKRYMTMMDSMT 386
>TIGR_CMR|BA_3985 [details] [associations]
symbol:BA_3985 "signal recognition particle-docking protein
FtsY" species:198094 "Bacillus anthracis str. Ames" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0005047 "signal recognition
particle binding" evidence=ISS] [GO:0009306 "protein secretion"
evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005737 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003924 GO:GO:0031226 KO:K03110
ProtClustDB:PRK10416 GO:GO:0006614 SUPFAM:SSF47364
TIGRFAMs:TIGR00064 HSSP:P83749 HOGENOM:HOG000036277
RefSeq:NP_846227.1 RefSeq:YP_020624.1 RefSeq:YP_029949.1
ProteinModelPortal:Q81WJ0 SMR:Q81WJ0 DNASU:1086789
EnsemblBacteria:EBBACT00000008913 EnsemblBacteria:EBBACT00000016260
EnsemblBacteria:EBBACT00000019469 GeneID:1086789 GeneID:2817443
GeneID:2848220 KEGG:ban:BA_3985 KEGG:bar:GBAA_3985 KEGG:bat:BAS3698
OMA:LVYRYRK BioCyc:BANT260799:GJAJ-3756-MONOMER
BioCyc:BANT261594:GJ7F-3873-MONOMER Uniprot:Q81WJ0
Length = 329
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 101/273 (36%), Positives = 161/273 (58%)
Query: 108 ENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVK 167
E+ E + +I L+ ADV + V + + E+ R ++ +++ ++ ++L++
Sbjct: 49 EDFFEELEEI---LIGADVGVSTVMELIDQLKEEVQR----RNIQDPREVQAVISEKLIE 101
Query: 168 LMGGE---VSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRP 224
+ G+ +E+ K TV+L G+ GVGKTT K+A+ K +GKS +L AGD +R
Sbjct: 102 IYKGDSDFTNEVNMQKDGLTVVLFVGVNGVGKTTTIGKMAHKFKSEGKSVLLAAGDTFRA 161
Query: 225 AAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMM 284
AI+QL + G++VGV V G+ P+ + ++ AK +NVDV++ DTAGRLQ +M
Sbjct: 162 GAIEQLEVWGDRVGVEVIKQGSGSDPAAVMYDAVQAAKARNVDVLLCDTAGRLQNKVNLM 221
Query: 285 DELKDVKRVLN------PTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRG 338
EL+ VKRV+ P EVLLV+DA TGQ + TF +TG +LTKLDG ++G
Sbjct: 222 KELEKVKRVIEREVPGAPHEVLLVIDATTGQNGLSQAKTFREATNVTGIVLTKLDGTAKG 281
Query: 339 GAALSVKEVSGKPIKLVGRGERMEDLEPFYPDR 371
G L+++ P+K VG GE+M+DL+ F P++
Sbjct: 282 GIVLAIRNEMDVPVKFVGLGEQMDDLQQFDPEQ 314
>UNIPROTKB|P10121 [details] [associations]
symbol:ftsY "SRP receptor" species:83333 "Escherichia coli
K-12" [GO:0006184 "GTP catabolic process" evidence=IEA;IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0031226 "intrinsic to
plasma membrane" evidence=IDA] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA;IDA] [GO:0005525 "GTP binding"
evidence=IEA;IDA] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300 SMART:SM00382
SMART:SM00962 SMART:SM00963 GO:GO:0005525 GO:GO:0005829 EMBL:U00039
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003924 GO:GO:0031226 EMBL:X04398
PIR:S03130 RefSeq:NP_417921.1 RefSeq:YP_491970.1 PDB:1FTS PDB:2QY9
PDB:2XXA PDB:2YHS PDBsum:1FTS PDBsum:2QY9 PDBsum:2XXA PDBsum:2YHS
ProteinModelPortal:P10121 SMR:P10121 DIP:DIP-9709N IntAct:P10121
MINT:MINT-1247716 TCDB:3.A.5.1.1 PRIDE:P10121
EnsemblBacteria:EBESCT00000004496 EnsemblBacteria:EBESCT00000016891
GeneID:12933505 GeneID:947978 KEGG:ecj:Y75_p3714 KEGG:eco:b3464
PATRIC:32122372 EchoBASE:EB0342 EcoGene:EG10346 eggNOG:COG0552
HOGENOM:HOG000036278 KO:K03110 OMA:AETNAEY ProtClustDB:PRK10416
BioCyc:EcoCyc:EG10346-MONOMER BioCyc:ECOL316407:JW3429-MONOMER
EvolutionaryTrace:P10121 Genevestigator:P10121 GO:GO:0006614
SUPFAM:SSF47364 TIGRFAMs:TIGR00064 Uniprot:P10121
Length = 497
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 101/262 (38%), Positives = 157/262 (59%)
Query: 116 DIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSE 175
++ LL ADV + R+ + ++E A + +R + L ++++E+ +++ +V E
Sbjct: 230 ELEEQLLIADVGVETTRKIITNLTEGASR----KQLRDAEALYGLLKEEMGEILA-KVDE 284
Query: 176 LVFAKSR-PTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILG 234
+ + + P VIL+ G+ GVGKTT KLA ++QGKS ML AGD +R AA++QL + G
Sbjct: 285 PLNVEGKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWG 344
Query: 235 EQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVL 294
++ +PV T + + ++ AK +N+DV+I DTAGRLQ +M+ELK + RV+
Sbjct: 345 QRNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVM 404
Query: 295 N------PTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 348
P EV+L +DA TGQ A + F+ +G+TG LTKLDG ++GG SV +
Sbjct: 405 KKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQF 464
Query: 349 GKPIKLVGRGERMEDLEPFYPD 370
G PI+ +G GER+EDL PF D
Sbjct: 465 GIPIRYIGVGERIEDLRPFKAD 486
>TIGR_CMR|SPO_1339 [details] [associations]
symbol:SPO_1339 "signal recognition particle-docking
protein FtsY" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0009306 "protein secretion"
evidence=ISS] [GO:0048501 "signal recognition particle, plasma
membrane targeting" evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005737 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0003924 GO:GO:0031226 HOGENOM:HOG000036278 KO:K03110
GO:GO:0006614 SUPFAM:SSF47364 TIGRFAMs:TIGR00064 OMA:ADMGVET
RefSeq:YP_166581.1 ProteinModelPortal:Q5LTS4 SMR:Q5LTS4
GeneID:3192959 KEGG:sil:SPO1339 PATRIC:23375989 Uniprot:Q5LTS4
Length = 390
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 95/285 (33%), Positives = 157/285 (55%)
Query: 101 GEETLTKENIVEPMRD-IRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVK 159
G T+ + + + M + + L+ AD+ + R ++E +G L Q++
Sbjct: 107 GGATVVRRTLDDDMLEQLEELLIAADMGVDTALRVTANMAEGRIGRKL-----STQEIKA 161
Query: 160 IVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAG 219
++ E+ ++M + RP V+L+ G+ G GKTT KLA+ K GK ++ AG
Sbjct: 162 LLAQEITRIMEPVARPMPLYPKRPQVVLVVGVNGSGKTTTIGKLASQFKAAGKKVVIAAG 221
Query: 220 DVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQI 279
D +R AA++QL + G++ GVPV TA P+ +A + A++ D++++DTAGRLQ
Sbjct: 222 DTFRAAAVEQLQVWGDRAGVPVLTAPEGSDPASLAFDAMTRAQEDGADLLLIDTAGRLQN 281
Query: 280 DKAMMDELKDVKRVLN------PTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLD 333
+M+EL + RV+ P LLV+DA TGQ A + V TF ++G ++TKLD
Sbjct: 282 RADLMEELAKIVRVIRKKDDTAPHNTLLVLDATTGQNAISQVETFQKLADVSGLVMTKLD 341
Query: 334 GDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILG 378
G ++GG +S+ + G PI +G GE+++DL PF P+ A + G
Sbjct: 342 GTAKGGILVSLADRFGLPIHAIGVGEQIDDLAPFDPEDFAAALTG 386
>TIGR_CMR|SO_4586 [details] [associations]
symbol:SO_4586 "signal recognition particle-docking protein
FtsY" species:211586 "Shewanella oneidensis MR-1" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0005047 "signal recognition
particle binding" evidence=ISS] [GO:0009306 "protein secretion"
evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005737 GO:GO:0003924 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0031226 HOGENOM:HOG000036278
KO:K03110 GO:GO:0006614 SUPFAM:SSF47364 TIGRFAMs:TIGR00064
HSSP:P10121 RefSeq:NP_720102.1 ProteinModelPortal:Q8E8S5 SMR:Q8E8S5
GeneID:1172171 KEGG:son:SO_4586 PATRIC:23528839 OMA:PDNANGP
Uniprot:Q8E8S5
Length = 510
Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
Identities = 95/263 (36%), Positives = 150/263 (57%)
Query: 112 EPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGG 171
E ++ LL ADV + R +++++E A + ++ + L ++RDE+ K +
Sbjct: 235 ELFEELEEQLLIADVGVETTGRLIKSLTEHASR----KQLKDAEALYDLLRDEMQKTLDP 290
Query: 172 EVSELVFAKSR-PTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQL 230
LV + P VIL+ G+ GVGKTT KLA ++QGKS ML AGD +R AA++QL
Sbjct: 291 VAIPLVPENANGPFVILMVGVNGVGKTTTIGKLAKQYQRQGKSVMLAAGDTFRAAAVEQL 350
Query: 231 VILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDV 290
+ G++ +PV T + + L+ AK + +DV+I DTAGRLQ +M+ELK V
Sbjct: 351 QVWGQRNNIPVVAQHTGADSASVLFDALQAAKARKIDVLIADTAGRLQNKSHLMEELKKV 410
Query: 291 KRVLN------PTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSV 344
RV+ P EV+L +DA TGQ A + F +G+TG ++KLDG ++GG ++
Sbjct: 411 VRVMKKLDPEAPHEVMLTLDASTGQNAISQAQLFQEAVGVTGMTISKLDGTAKGGVVFAI 470
Query: 345 KEVSGKPIKLVGRGERMEDLEPF 367
+ P++ +G GE+++DL F
Sbjct: 471 ADKFKIPLRYIGVGEQIDDLRTF 493
>TIGR_CMR|CPS_0157 [details] [associations]
symbol:CPS_0157 "signal recognition particle-docking
protein FtsY" species:167879 "Colwellia psychrerythraea 34H"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300 SMART:SM00382
SMART:SM00962 SMART:SM00963 GO:GO:0005525 GO:GO:0005737
GO:GO:0003924 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0031226
eggNOG:COG0552 HOGENOM:HOG000036278 KO:K03110 GO:GO:0006614
SUPFAM:SSF47364 TIGRFAMs:TIGR00064 RefSeq:YP_266925.1
ProteinModelPortal:Q48AI8 SMR:Q48AI8 STRING:Q48AI8 GeneID:3519649
KEGG:cps:CPS_0157 PATRIC:21463731 OMA:VEAVAIQ
BioCyc:CPSY167879:GI48-260-MONOMER Uniprot:Q48AI8
Length = 481
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 103/296 (34%), Positives = 160/296 (54%)
Query: 85 FGQLTSGLEAAWNKLKGE--ETLTKENIVEPM-RDIRRALLEADVSLPVVRRFVQAVSEQ 141
F +L GL L G + + I + + ++ LL ADV + + ++++++
Sbjct: 181 FARLKQGLSKTRQNLGGGLIDLFRGKQIDDDLFEELETHLLLADVGVETTMKIIESLTQS 240
Query: 142 AVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSR-PTVILLAGLQGVGKTTVS 200
A + ++ L +++ EL K++ LV + P VIL+ G+ GVGKTT
Sbjct: 241 ANR----KQLKDASALYDLLKIELKKVIEDVSQPLVIPEDDGPFVILMVGVNGVGKTTTI 296
Query: 201 AKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEE 260
KLA + QGKS ML AGD +R AA++QL + GE+ +PV T + + +
Sbjct: 297 GKLAKQFQAQGKSVMLAAGDTFRAAAVEQLQVWGERNNIPVIAQHTGADSASVIFDAISA 356
Query: 261 AKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLN------PTEVLLVVDAMTGQEAAAL 314
AK + VD++I DTAGRLQ +M+ELK V RV+ P EV+L +DA TGQ A +
Sbjct: 357 AKARKVDIIIADTAGRLQNKAHLMEELKKVVRVMKKLDVNAPHEVMLTLDAGTGQNALSQ 416
Query: 315 VTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPD 370
F+ +G+TG +TKLDG ++GG +V + PI+ +G GE ++DL PF D
Sbjct: 417 TKLFDEAVGLTGLTITKLDGTAKGGVIFAVADKHSIPIRYLGVGEGIDDLRPFNSD 472
>TIGR_CMR|VC_0147 [details] [associations]
symbol:VC_0147 "signal recognition particle-docking protein
FtsY" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0005047 "signal recognition
particle binding" evidence=ISS] [GO:0009306 "protein secretion"
evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005737 GO:GO:0051301 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003924 GO:GO:0031226 KO:K03110
ProtClustDB:PRK10416 GO:GO:0006614 SUPFAM:SSF47364
TIGRFAMs:TIGR00064 OMA:VEAVAIQ HSSP:P10121 PIR:B82360
RefSeq:NP_229805.1 ProteinModelPortal:Q9KVJ6 SMR:Q9KVJ6
DNASU:2614855 GeneID:2614855 KEGG:vch:VC0147 PATRIC:20079332
Uniprot:Q9KVJ6
Length = 391
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 94/259 (36%), Positives = 146/259 (56%)
Query: 116 DIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSE 175
++ LL ADV + + + ++ +A L R + L ++++E+ +++
Sbjct: 123 ELEEQLLIADVGMDTTSKIIANLTARASRQQL----RDGEALYGLLKEEMAEILSQVEQP 178
Query: 176 LVF-AKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILG 234
LV + +P VIL+ G+ GVGKTT KLA + QGK ML AGD +R AA++QL + G
Sbjct: 179 LVIDTEKKPYVILMVGVNGVGKTTTIGKLAKQFQAQGKKVMLAAGDTFRAAAVEQLQVWG 238
Query: 235 EQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVL 294
E+ VPV T + + +E AK + +DVVI DTAGRLQ +M+EL+ + RV+
Sbjct: 239 ERNQVPVIAQHTGADSASVIYDAIEAAKARGIDVVIADTAGRLQNKSNLMEELRKIVRVM 298
Query: 295 N------PTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 348
P E++L +DA TGQ A + F+ ITG LTKLDG ++GG ++ +
Sbjct: 299 KKIDDSAPHEIMLTLDAGTGQNAISQAKLFSDVAPITGITLTKLDGTAKGGVIFAIADQF 358
Query: 349 GKPIKLVGRGERMEDLEPF 367
PI+ +G GE+++DL PF
Sbjct: 359 QIPIRYIGVGEKIDDLRPF 377
>TIGR_CMR|CBU_1903 [details] [associations]
symbol:CBU_1903 "signal recognition particle-docking
protein FtsY" species:227377 "Coxiella burnetii RSA 493"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0005047 "signal
recognition particle binding" evidence=ISS] [GO:0009306 "protein
secretion" evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300 SMART:SM00382
SMART:SM00962 SMART:SM00963 GO:GO:0005525 GO:GO:0005737
GO:GO:0051301 GO:GO:0003924 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0031226 HOGENOM:HOG000036278 KO:K03110 ProtClustDB:PRK10416
GO:GO:0006614 SUPFAM:SSF47364 TIGRFAMs:TIGR00064 OMA:NRIPDEL
RefSeq:NP_820880.1 HSSP:P10121 ProteinModelPortal:Q83AI3 SMR:Q83AI3
PRIDE:Q83AI3 GeneID:1209816 KEGG:cbu:CBU_1903 PATRIC:17932545
BioCyc:CBUR227377:GJ7S-1878-MONOMER Uniprot:Q83AI3
Length = 324
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 101/287 (35%), Positives = 158/287 (55%)
Query: 87 QLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVG 146
+LT GL N + G++T+ +++E + I LL AD+ + + + +S+Q
Sbjct: 38 RLTDGLS---NLVLGKKTIDA-SLLEELEMI---LLSADIGIEATQSILNNLSQQVAR-- 88
Query: 147 LIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANY 206
+ + + L+ ++ EL+ ++ L + S P VIL G+ GVGKTT AKLA++
Sbjct: 89 --KSLSDPKALIDALKIELLNILEPCQKHLEISAS-PFVILTVGVNGVGKTTTIAKLAHF 145
Query: 207 LKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNV 266
+ Q K ML AGD +R AAI+QL G++ PV + + +E A ++
Sbjct: 146 YQSQKKRVMLAAGDTFRAAAIEQLQTWGQRNNAPVIAQQPGADSASVIYDAMEAATARHY 205
Query: 267 DVVIVDTAGRLQIDKAMMDELKDVKRVLN------PTEVLLVVDAMTGQEAAALVTTFNI 320
D++I DTAGRL +MDEL +KRV+ P E LLV+DA TGQ A F+
Sbjct: 206 DLLIADTAGRLHTQSHLMDELAKIKRVMKKINPDAPHETLLVLDAGTGQNAINQAEQFHE 265
Query: 321 EIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPF 367
IG+TG +TKLDG ++GG ++ + PI+ +G GE++EDL+PF
Sbjct: 266 HIGLTGIAITKLDGTAKGGVIFAIAKKMQLPIRFIGMGEKIEDLKPF 312
>TIGR_CMR|NSE_0545 [details] [associations]
symbol:NSE_0545 "signal recognition particle-docking
protein FtsY" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0009306 "protein
secretion" evidence=ISS] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0006184 GO:GO:0017111 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0552 HOGENOM:HOG000036278 KO:K03110 ProtClustDB:PRK10416
GO:GO:0006614 SUPFAM:SSF47364 TIGRFAMs:TIGR00064 RefSeq:YP_506428.1
ProteinModelPortal:Q2GDL8 STRING:Q2GDL8 GeneID:3931766
KEGG:nse:NSE_0545 PATRIC:22681139 OMA:RIISQNQ
BioCyc:NSEN222891:GHFU-564-MONOMER Uniprot:Q2GDL8
Length = 309
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 99/284 (34%), Positives = 152/284 (53%)
Query: 102 EETLTKENIVEP-MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKI 160
+ KE I E + + L+ AD+ V R ++ V + V G +Q+ I
Sbjct: 25 DNIFAKEKISESTIEQLEELLISADIGPTVTERIIKTVKKIKVKDG-----ESLEQVKSI 79
Query: 161 VRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGD 220
R+E+ K++ +L+F ++ P VI+ G+ G GKTT KLA ++ K+ M+ A D
Sbjct: 80 TREEMKKVLDPTSKKLIFPQTGPQVIVFCGVNGNGKTTTIGKLAYKFIQENKTVMIAACD 139
Query: 221 VYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQID 280
++R AAI+QL E+ +++ T S A + LE+A + VDV+IVDT+GRL
Sbjct: 140 LFRAAAIEQLRFWAERASATFFSSETSKNASGTAYKALEKALEDKVDVLIVDTSGRLHTQ 199
Query: 281 KAMMDELKDVKRVLN------PTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDG 334
+M+ELK + RVL+ P EV+L +DA TGQ A V F + +TG ++TKLDG
Sbjct: 200 NDLMEELKKICRVLSKLMPSAPNEVILALDASTGQNALNQVQVFKDAVNLTGLVVTKLDG 259
Query: 335 DSRGGAALSVKE-VSGKPIKLVGRGERMEDLEPFYPDRMAGRIL 377
S+GG +++ E I VG GE++ DLE F P +L
Sbjct: 260 TSKGGVIVAIAERYPNLGIYFVGTGEKITDLEEFSPSEFVDALL 303
>UNIPROTKB|Q97QH0 [details] [associations]
symbol:ftsY "Signal recognition particle receptor FtsY"
species:170187 "Streptococcus pneumoniae TIGR4" [GO:0005515
"protein binding" evidence=IPI] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300 SMART:SM00382
SMART:SM00962 SMART:SM00963 GO:GO:0005525 GO:GO:0005737
GO:GO:0003924 EMBL:AE005672 GenomeReviews:AE005672_GR GO:GO:0031226
HOGENOM:HOG000036278 KO:K03110 ProtClustDB:PRK10416 GO:GO:0006614
SUPFAM:SSF47364 TIGRFAMs:TIGR00064 HSSP:P83749 PIR:D95144
RefSeq:NP_345709.1 ProteinModelPortal:Q97QH0
EnsemblBacteria:EBSTRT00000026851 GeneID:931757 KEGG:spn:SP_1244
PATRIC:19706881 OMA:DEGKSVI Uniprot:Q97QH0
Length = 429
Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
Identities = 95/277 (34%), Positives = 152/277 (54%)
Query: 112 EPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLM-- 169
E ++ L+ +DV + V + + +A L +PD L +++ ++LV+L
Sbjct: 156 EFFEELEELLIMSDVGVQVASNLTEELRYEAK---LENAKKPDV-LRRVIIEKLVELYEK 211
Query: 170 GGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQ 229
G E + + TV+L G+ GVGKTT KLA+ K+ GK MLVA D +R A+ Q
Sbjct: 212 DGSYDESIHFQDNLTVMLFVGVNGVGKTTSIGKLAHRYKQAGKKVMLVAADTFRAGAVAQ 271
Query: 230 LVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKD 289
L G +V VPV T + P+ + G+E A + +D++++DTAGRLQ +M EL+
Sbjct: 272 LAEWGRRVDVPVVTGPEKADPASVVFDGMERAVTEGIDILMIDTAGRLQNKDNLMAELEK 331
Query: 290 VKRVLN------PTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALS 343
+ R++ P E L +DA TGQ A F+ +TG +LTK+DG +RGG L+
Sbjct: 332 IGRIIKRVVPEAPHETFLALDASTGQNALVQAKEFSKITPLTGIVLTKIDGTARGGVVLA 391
Query: 344 VKEVSGKPIKLVGRGERMEDLEPFYPDR-MAGRILGM 379
++E P+KL+G GE+++D+ F + M G + G+
Sbjct: 392 IREELNIPVKLIGFGEKIDDIGEFNSENFMKGLLEGL 428
>UNIPROTKB|P83749 [details] [associations]
symbol:ftsY "Signal recognition particle receptor FtsY"
species:271 "Thermus aquaticus" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_00920 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005886 GO:GO:0005737 GO:GO:0006184
GO:GO:0017111 GO:GO:0006614 SUPFAM:SSF47364 TIGRFAMs:TIGR00064
EMBL:AY484668 PDB:1OKK PDB:1RJ9 PDB:2CNW PDB:2IYL PDB:2J7P PDB:2Q9A
PDB:2Q9B PDB:2Q9C PDB:2XKV PDBsum:1OKK PDBsum:1RJ9 PDBsum:2CNW
PDBsum:2IYL PDBsum:2J7P PDBsum:2Q9A PDBsum:2Q9B PDBsum:2Q9C
PDBsum:2XKV ProteinModelPortal:P83749 SMR:P83749 IntAct:P83749
EvolutionaryTrace:P83749 Uniprot:P83749
Length = 304
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 102/283 (36%), Positives = 148/283 (52%)
Query: 109 NIVEPMRDIRRALLEADVSLPVVRRFVQAVS-------EQAVGVGLIRGVRPDQQLVKIV 161
N+ E + ++ ALL ADV L +Q V ++AV L+ + PD++
Sbjct: 27 NLEEVLEELEMALLAADVGLSATEEILQEVRASGRKDLKEAVKEKLVGMLEPDER----- 81
Query: 162 RDELVKL-MGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGD 220
R L KL + + V K R V+L+ G+ GVGKTT AKL Y + GK M AGD
Sbjct: 82 RATLRKLGFNPQKPKPVEPKGR--VVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGD 139
Query: 221 VYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQID 280
+R A QL G+++ +PV P+ +A ++ K + D++ VDTAGRL
Sbjct: 140 TFRAAGGTQLSEWGKRLSIPVIQGPEGTDPAALAYDAVQAMKARGYDLLFVDTAGRLHTK 199
Query: 281 KAMMDELKDVKRVL------NPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDG 334
+M+ELK VKR + P EV LV+DA+TGQ F+ +G+TG I+TKLDG
Sbjct: 200 HNLMEELKKVKRAIAKADPEEPKEVWLVLDAVTGQNGLEQAKKFHEAVGLTGVIVTKLDG 259
Query: 335 DSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRIL 377
++GG + + PIK VG GE +DL+PF P+ +L
Sbjct: 260 TAKGGVLIPIVRTLKVPIKFVGVGEGPDDLQPFDPEAFVEALL 302
>UNIPROTKB|P66842 [details] [associations]
symbol:ftsY "Signal recognition particle receptor FtsY"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
HAMAP:MF_00920 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005886 GO:GO:0005737 GO:GO:0005618
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0006184 EMBL:BX842581 GO:GO:0017111 eggNOG:COG0552
HOGENOM:HOG000036278 KO:K03110 ProtClustDB:PRK10416 GO:GO:0006614
SUPFAM:SSF47364 TIGRFAMs:TIGR00064 PIR:A70748 RefSeq:NP_217437.1
RefSeq:NP_337502.1 RefSeq:YP_006516374.1 ProteinModelPortal:P66842
SMR:P66842 TCDB:3.A.5.2.2 PhosSite:P12071727 PRIDE:P66842
EnsemblBacteria:EBMYCT00000000121 EnsemblBacteria:EBMYCT00000072194
GeneID:13317714 GeneID:887205 GeneID:925285 KEGG:mtc:MT2989
KEGG:mtu:Rv2921c KEGG:mtv:RVBD_2921c PATRIC:18128342
TubercuList:Rv2921c OMA:FIGIGEN Uniprot:P66842
Length = 422
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 97/269 (36%), Positives = 140/269 (52%)
Query: 115 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVK-IVRDELVKLMGGEV 173
+D+ LL AD+ P V + + G +R + +++ ++ +EL M +
Sbjct: 156 QDVEDTLLVADLG-PAATASVVSQLRSRLASGNVRTEADARAVLRDVLINELQPGMDRSI 214
Query: 174 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 233
L A P+V+L+ G+ G GKTT KLA L G+ +L A D +R AA DQL
Sbjct: 215 RALPHA-GHPSVLLVVGVNGTGKTTTVGKLARVLVADGRRVVLGAADTFRAAAADQLQTW 273
Query: 234 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 293
+VG V P+ +A +++ DVV++DTAGRL +MDEL VKRV
Sbjct: 274 AARVGAAVVRGPEGADPASVAFDAVDKGIAAGADVVLIDTAGRLHTKVGLMDELDKVKRV 333
Query: 294 L----NPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSG 349
+ + EVLLV+DA GQ A F + I+GA+LTKLDG ++GG V++ G
Sbjct: 334 VTRRASVDEVLLVLDATIGQNGLAQARVFAEVVDISGAVLTKLDGTAKGGIVFRVQQELG 393
Query: 350 KPIKLVGRGERMEDLEPFYPDRMAGRILG 378
P+KLVG GE +DL PF P +LG
Sbjct: 394 VPVKLVGLGEGPDDLAPFEPAAFVDALLG 422
>TIGR_CMR|GSU_1132 [details] [associations]
symbol:GSU_1132 "signal recognition particle-docking
protein FtsY" species:243231 "Geobacter sulfurreducens PCA"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0005047 "signal
recognition particle binding" evidence=ISS] [GO:0009306 "protein
secretion" evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300 SMART:SM00382
SMART:SM00962 SMART:SM00963 GO:GO:0005525 GO:GO:0005737
GO:GO:0003924 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0031226
HOGENOM:HOG000036278 KO:K03110 ProtClustDB:PRK10416 GO:GO:0006614
SUPFAM:SSF47364 TIGRFAMs:TIGR00064 RefSeq:NP_952185.1
ProteinModelPortal:Q74E32 SMR:Q74E32 GeneID:2686843
KEGG:gsu:GSU1132 PATRIC:22025026 OMA:HLMAELE
BioCyc:GSUL243231:GH27-1142-MONOMER Uniprot:Q74E32
Length = 350
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 96/299 (32%), Positives = 156/299 (52%)
Query: 84 MFGQLTSGLEAAWNKLKGEE---TLTKENI-VEPMRDIRRALLEADVSLPVVRRFVQAVS 139
+F +L GL + L G L K+ I + + ++ L+ AD+ + ++ +
Sbjct: 50 LFERLKQGLSKTRDSLVGRIDRLVLGKKEIDADTLEELEEILITADLGVQTTVELIRGLE 109
Query: 140 EQAVGVGLIRGVRPD-QQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTT 198
++ L R D + L + +++++ + + +L + P VI++ G+ GVGKTT
Sbjct: 110 QR-----LSRNELKDGEALREALKEDIHGRLARDAHQLDVTGASPFVIMVIGVNGVGKTT 164
Query: 199 VSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGL 258
KLA QGK +L AGD +R AA +QL I GE+ GV V PS + +
Sbjct: 165 TIGKLAARFTAQGKKVILAAGDTFRAAAAEQLQIWGERTGVDVIRHKEGADPSAVVFDSI 224
Query: 259 EEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLN------PTEVLLVVDAMTGQEAA 312
+ A + D++IVDTAGRL +M+ELK V+R+++ P E LLV+DA TGQ A
Sbjct: 225 KAAVARGADILIVDTAGRLHTKVNLMEELKKVRRIMSREIPGAPHETLLVLDAATGQNAL 284
Query: 313 ALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDR 371
+ F +TG LTKLDG ++GG +++ P++ +G GE ++DL F P +
Sbjct: 285 SQAKLFKEAAQVTGIALTKLDGTAKGGIVVAICNEFRIPVRYIGVGEGIDDLRDFDPSQ 343
>TIGR_CMR|ECH_1111 [details] [associations]
symbol:ECH_1111 "signal recognition particle-docking
protein FtsY" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0005047 "signal
recognition particle binding" evidence=ISS] [GO:0009306 "protein
secretion" evidence=ISS] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006184 GO:GO:0017111
eggNOG:COG0552 HOGENOM:HOG000036278 KO:K03110 ProtClustDB:PRK10416
GO:GO:0006614 SUPFAM:SSF47364 TIGRFAMs:TIGR00064 RefSeq:YP_507895.1
ProteinModelPortal:Q2GF88 STRING:Q2GF88 GeneID:3927733
KEGG:ech:ECH_1111 PATRIC:20577558 OMA:ADMGVET
BioCyc:ECHA205920:GJNR-1114-MONOMER Uniprot:Q2GF88
Length = 310
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 85/277 (30%), Positives = 146/277 (52%)
Query: 112 EPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGG 171
E + +++ L+ ADV Q ++ V+ Q+L + + + L+
Sbjct: 41 ETLEELKELLITADVGYDNASLLTQKLASTKFNEMDDNTVK--QKLAESIENILL----- 93
Query: 172 EVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLV 231
+V + + ++P VI++ G G GKTT KLA+ K GK ++ A D +R AA +QL+
Sbjct: 94 QVEKPLSINNKPHVIMVCGTNGNGKTTTIGKLAHRFKNTGKKVLVAACDTFRAAATEQLI 153
Query: 232 ILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVK 291
+ ++V PV T + IA Q +++A + DV+++DTAGRL K +M+EL ++
Sbjct: 154 VWSQKVNFPVVTGNQGADAASIAYQAMQQALNEQTDVLLIDTAGRLHNHKNLMEELAKIR 213
Query: 292 RVLN------PTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVK 345
R++N P +V+L++DA TGQ A V F + I+G I+TKLDG ++GG + +
Sbjct: 214 RIINKHDNNAPHDVILILDATTGQNAVNQVDAFLQFVNISGLIITKLDGTAKGGVVIRIA 273
Query: 346 EVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 382
+ I +G GE +E L+ F A +L + +
Sbjct: 274 QKYKLNIHAIGIGESVEQLQDFSAKEFAAGLLDINTI 310
>TIGR_CMR|APH_1227 [details] [associations]
symbol:APH_1227 "signal recognition particle-docking
protein FtsY" species:212042 "Anaplasma phagocytophilum HZ"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0005047 "signal
recognition particle binding" evidence=ISS] [GO:0009306 "protein
secretion" evidence=ISS] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0006184 EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0017111
eggNOG:COG0552 HOGENOM:HOG000036278 KO:K03110 ProtClustDB:PRK10416
GO:GO:0006614 SUPFAM:SSF47364 TIGRFAMs:TIGR00064 OMA:ADMGVET
RefSeq:YP_505757.1 ProteinModelPortal:Q2GIP4 STRING:Q2GIP4
GeneID:3931129 KEGG:aph:APH_1227 PATRIC:20951240
BioCyc:APHA212042:GHPM-1232-MONOMER Uniprot:Q2GIP4
Length = 305
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 96/304 (31%), Positives = 150/304 (49%)
Query: 90 SGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIR 149
S E+ W LK + T + E +R+I +ADV ++ + +G +
Sbjct: 2 SSNESFWQSLKRGLSKTSARLSEGIRNIFGG--KADVDQSTLKALRDLLISTDMGPDVAD 59
Query: 150 GVRPDQQLVKI---VRDELVKLMGGEVSELVFAKSRPT-------VILLAGLQGVGKTTV 199
+K V +E+ + E+ + +S P +ILL G+ G GKTT
Sbjct: 60 FFTQKISTLKFTDSVAEEVRLKLASEIENFLQPRSAPITITHTPHIILLCGVNGSGKTTT 119
Query: 200 SAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLE 259
AKLA+ K+ S ++ A D +R AA++QL + E++ P+ T + +A + +E
Sbjct: 120 VAKLAHKFMKKNMSVIIGACDTFRAAAVEQLNVWAERISCPIVTGTIGADAASVAYKTVE 179
Query: 260 EAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLN------PTEVLLVVDAMTGQEAAA 313
A K+ DVVI+DTAGRL K +M+EL + RV+ P +++LV+DA GQ
Sbjct: 180 RAVKEPFDVVIIDTAGRLHNHKNLMEELAKICRVIRRHDEKAPHDIILVLDATIGQNTFT 239
Query: 314 LVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMA 373
V F+ + + G ILTKLDG ++GG L V + I +G GE +EDLE F A
Sbjct: 240 QVEMFSSFVDVGGLILTKLDGTAKGGVVLRVSQKYNLMIHAIGTGEGIEDLEDFSATNFA 299
Query: 374 GRIL 377
+L
Sbjct: 300 KSLL 303
>TIGR_CMR|CJE_1340 [details] [associations]
symbol:CJE_1340 "signal recognition particle-docking
protein FtsY" species:195099 "Campylobacter jejuni RM1221"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0005047 "signal
recognition particle binding" evidence=ISS] [GO:0009306 "protein
secretion" evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300 SMART:SM00382
SMART:SM00962 GO:GO:0005525 GO:GO:0005737 GO:GO:0003924
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0031226
eggNOG:COG0552 KO:K03110 ProtClustDB:PRK10416 GO:GO:0006614
SUPFAM:SSF47364 TIGRFAMs:TIGR00064 HOGENOM:HOG000036277
RefSeq:YP_179327.1 ProteinModelPortal:Q5HTQ8 STRING:Q5HTQ8
GeneID:3231847 KEGG:cjr:CJE1340 PATRIC:20044480 OMA:DLVTPKQ
BioCyc:CJEJ195099:GJC0-1366-MONOMER Uniprot:Q5HTQ8
Length = 288
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 89/259 (34%), Positives = 130/259 (50%)
Query: 117 IRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV--S 174
+ LLEADVS +V + + P Q VK +++L ++MG
Sbjct: 31 LEEILLEADVSYEIVEEIIYYL--------------PPQNEVK--KEDLKRVMGSYFLYE 74
Query: 175 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILG 234
+ + +P V L+ G+ G GKTT AKLA K Q + +L A D +R AI+QL +
Sbjct: 75 KKETNQEKPFVELILGVNGAGKTTSIAKLAYLYKNQNQKVILGACDTFRAGAIEQLKLWA 134
Query: 235 EQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVL 294
++V V + PS +A + +AK K+ D VI+DTAGRLQ K + EL+ + R+
Sbjct: 135 QKVDVDIVLTAQGHDPSAVAFDTISKAKAKDFDRVIIDTAGRLQNQKNLAHELEKIVRIS 194
Query: 295 N------PTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVS 348
N P +LV+D G FN + + G I+TKLDG ++GGA S+
Sbjct: 195 NKALEGAPHRKILVLDGTQGNAGILQAKAFNELVKLDGVIITKLDGTAKGGALFSIAREL 254
Query: 349 GKPIKLVGRGERMEDLEPF 367
PI VG GE+M DL+ F
Sbjct: 255 ELPIFYVGVGEQMTDLQEF 273
>TAIR|locus:2118701 [details] [associations]
symbol:AT4G30600 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0005047 "signal recognition particle
binding" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=ISS] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0006605 "protein targeting" evidence=ISS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0006623 "protein targeting to vacuole" evidence=RCA]
[GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 GO:GO:0005525
GO:GO:0005783 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003924
EMBL:AL161577 SUPFAM:SSF64356 eggNOG:COG0552 GO:GO:0006614
SUPFAM:SSF47364 KO:K13431 GO:GO:0005785 GO:GO:0005047
HOGENOM:HOG000201671 OMA:LILWSSC EMBL:AY065066 EMBL:AY133612
IPI:IPI00534083 PIR:A85358 RefSeq:NP_194789.1 UniGene:At.4581
HSSP:P83749 ProteinModelPortal:Q9M0A0 SMR:Q9M0A0 STRING:Q9M0A0
PaxDb:Q9M0A0 PRIDE:Q9M0A0 EnsemblPlants:AT4G30600.1 GeneID:829183
KEGG:ath:AT4G30600 TAIR:At4g30600 InParanoid:Q9M0A0
PhylomeDB:Q9M0A0 ProtClustDB:CLSN2685629 ArrayExpress:Q9M0A0
Genevestigator:Q9M0A0 Uniprot:Q9M0A0
Length = 634
Score = 326 (119.8 bits), Expect = 2.3e-27, P = 2.3e-27
Identities = 83/290 (28%), Positives = 153/290 (52%)
Query: 94 AAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRP 153
+ + + G+ L + ++ ++ ++ L+ +V+ + + ++V G L R
Sbjct: 332 SVFQSITGKANLERTDLGPALKALKERLMTKNVAEEIAEKLCESVEASLEGKKLSSFTRI 391
Query: 154 DQQLVKIVRDELVKLMGGEVS-----ELVFAKS--RPTVILLAGLQGVGKTTVSAKLANY 206
+ + D LV+++ S ++ AK +P V++ G+ GVGK+T AK+A +
Sbjct: 392 SSTVQAAMEDALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYW 451
Query: 207 LKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNV 266
L++ S M+ A D +R A++QL ++ +P++ G E P+ +AK+ ++EA +
Sbjct: 452 LQQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNGS 511
Query: 267 DVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG--- 323
DVV+VDTAGR+Q ++ +M L + + P VL V +A+ G +A ++ FN ++
Sbjct: 512 DVVLVDTAGRMQDNEPLMRALSKLINLNQPDLVLFVGEALVGNDAVDQLSKFNQKLSDLS 571
Query: 324 -------ITGAILTKLDG-DSRGGAALSVKEVSGKPIKLVGRGERMEDLE 365
I G +LTK D D + GAALS+ +SG P+ VG G+ DL+
Sbjct: 572 TSGNPRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLK 621
>WB|WBGene00009521 [details] [associations]
symbol:F38A1.8 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0005047 "signal recognition
particle binding" evidence=IEA] [GO:0005785 "signal recognition
particle receptor complex" evidence=IEA] [GO:0006184 "GTP catabolic
process" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0018996 GO:GO:0003924 GO:GO:0048477
SUPFAM:SSF64356 GO:GO:0006614 SUPFAM:SSF47364 KO:K13431
GO:GO:0005785 GO:GO:0005047 GeneTree:ENSGT00550000074936
OMA:KEGSDGP EMBL:FO080472 EMBL:FO081324 EMBL:FO081776
RefSeq:NP_741303.2 ProteinModelPortal:G4RYA5 SMR:G4RYA5
EnsemblMetazoa:F38A1.8 GeneID:185438 KEGG:cel:CELE_F38A1.8
CTD:185438 WormBase:F38A1.8 NextBio:928280 Uniprot:G4RYA5
Length = 625
Score = 298 (110.0 bits), Expect = 5.7e-24, Sum P(2) = 5.7e-24
Identities = 89/291 (30%), Positives = 152/291 (52%)
Query: 99 LKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLV 158
L GE+ L+ E++ + +R L+ +V+ + Q+V + G + R Q++
Sbjct: 321 LVGEKKLSAEDLNPLIEKMRENLILKNVASEPAEKICQSVVSKLEGKVVNNFSRVAQEVK 380
Query: 159 KIVRDELVKLMGGE-----VSELVFAK--SRPTVILLAGLQGVGKTTVSAKLANYLKKQG 211
VR+ LV+L+ + + +++ AK RP VI+ G+ GVGK+T AK+ +L +
Sbjct: 381 TAVRESLVQLLTPKHRVDILRDVIEAKRDGRPYVIVFCGVNGVGKSTNLAKITFWLTENK 440
Query: 212 KSCMLVAGDVYRPAAIDQLVILGEQVG------VPVYTAGTEVKPSQIAKQGLEEAKKKN 265
++ AGD +R A++QL + V ++ G P+ +A +++A +++
Sbjct: 441 HRVLIAAGDTFRAGAVEQLRTHARYLNDLHKNSVLLHEQGYGKDPAGLAAAAIKKAAEQD 500
Query: 266 VDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG-- 323
DVV+VDTAGR+Q ++ +M EL + RV P VL V +A+ G EA + FN +
Sbjct: 501 FDVVLVDTAGRMQDNEPLMRELAKLIRVNEPDLVLFVGEALVGNEAVDQLVKFNEALANH 560
Query: 324 ---------ITGAILTKLDG-DSRGGAALSVKEVSGKPIKLVGRGERMEDL 364
I G +LTK D D + GAA+S+ ++G+PI VG G+ DL
Sbjct: 561 ASPGQKPRLIDGIVLTKFDTIDDKVGAAVSMTYITGQPIVFVGCGQTYSDL 611
Score = 40 (19.1 bits), Expect = 5.7e-24, Sum P(2) = 5.7e-24
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 83 EMFGQLTSGLEAAWNKLKGEETLTK 107
E+F T G WN +G+ T+
Sbjct: 3 ELFSIFTKGGVCLWNYQEGDYNFTE 27
Score = 37 (18.1 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 2 EAVQFSTVASRHYSATSKTFYNSRISAGKSAK 33
E +T S Y +TF+ A KSA+
Sbjct: 101 EETALTTPPSNIYGNFDETFHEVLSEAAKSAR 132
>DICTYBASE|DDB_G0277377 [details] [associations]
symbol:srpR "signal recognition particle receptor
alpha subunit" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0005785
"signal recognition particle receptor complex" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005047 "signal
recognition particle binding" evidence=IEA;ISS] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0045047 "protein targeting to ER" evidence=ISS]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA;ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR007222 InterPro:IPR011012 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF04086 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 dictyBase:DDB_G0277377 GO:GO:0005525
GO:GO:0005789 GO:GO:0003924 GenomeReviews:CM000151_GR
EMBL:AAFI02000019 SUPFAM:SSF64356 eggNOG:COG0552 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0045047 GO:GO:0005785 GO:GO:0005047
HSSP:P08240 RefSeq:XP_642799.1 ProteinModelPortal:Q54ZR7
STRING:Q54ZR7 EnsemblProtists:DDB0252680 GeneID:8620992
KEGG:ddi:DDB_G0277377 OMA:LILWSSC ProtClustDB:CLSZ2846855
Uniprot:Q54ZR7
Length = 615
Score = 284 (105.0 bits), Expect = 3.1e-22, P = 3.1e-22
Identities = 86/295 (29%), Positives = 142/295 (48%)
Query: 90 SGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGL-- 147
SG +N L G + K+++ + D + L + +V+ V + VQ++ G L
Sbjct: 308 SGFMKYFNVLTGNRVIDKQDLEPILADFKLHLTKKNVAPDVADKIVQSIGTGLEGKKLAT 367
Query: 148 IRGVRP--DQQLVKIVRDELVKLMGGEV-SELVFAKS-RPTVILLAGLQGVGKTTVSAKL 203
+GV QQ+ + L ++ E+ K RP I+ +G+ GVGK+T AK+
Sbjct: 368 FQGVTSVVKQQMEDTITRILTPKRNIDILREVQAVKGKRPYSIVFSGVNGVGKSTNLAKV 427
Query: 204 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKK 263
+L G CML A D +R AI+QL +++ V ++ G + +A+ + AK
Sbjct: 428 CYWLTANGYKCMLAACDTFRSGAIEQLKTHADRLNVHLFERGYSKDAASVAQDAIAFAKD 487
Query: 264 KNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG 323
DVV++DT GR+Q ++ +M L + N VL V +A+ G + +T F+ +
Sbjct: 488 TGYDVVLIDTTGRMQNNEPLMKALSKLVNQNNVDLVLFVGEALVGNDGVDQLTKFDKSLS 547
Query: 324 ------------ITGAILTKLDG-DSRGGAALSVKEVSGKPIKLVGRGERMEDLE 365
I G ILTK D D + GAA+S+ +G PI +G G+ DL+
Sbjct: 548 LLANTTQTHIRTIDGIILTKFDTIDDKVGAAISMVYSTGHPILFLGTGQNYTDLK 602
>FB|FBgn0010391 [details] [associations]
symbol:Gtp-bp "GTP-binding protein" species:7227 "Drosophila
melanogaster" [GO:0003729 "mRNA binding" evidence=NAS] [GO:0005789
"endoplasmic reticulum membrane" evidence=IDA] [GO:0007409
"axonogenesis" evidence=IEP] [GO:0050708 "regulation of protein
secretion" evidence=IEP] [GO:0005785 "signal recognition particle
receptor complex" evidence=ISS] [GO:0005047 "signal recognition
particle binding" evidence=ISS] [GO:0005525 "GTP binding"
evidence=IEA;NAS] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005811 "lipid particle" evidence=IDA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005789 GO:GO:0005811 EMBL:AE014298
GO:GO:0003924 GO:GO:0003723 GO:GO:0007409 GO:GO:0050708
SUPFAM:SSF64356 eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364
KO:K13431 GO:GO:0005785 GO:GO:0005047 OMA:LILWSSC EMBL:AY061329
EMBL:S65640 RefSeq:NP_524887.2 UniGene:Dm.129
ProteinModelPortal:Q9U5L1 SMR:Q9U5L1 IntAct:Q9U5L1 MINT:MINT-765133
STRING:Q9U5L1 PaxDb:Q9U5L1 EnsemblMetazoa:FBtr0073480 GeneID:47251
KEGG:dme:Dmel_CG2522 CTD:47251 FlyBase:FBgn0010391
GeneTree:ENSGT00550000074936 InParanoid:Q9U5L1 OrthoDB:EOG4W0VV7
PhylomeDB:Q9U5L1 GenomeRNAi:47251 NextBio:838983 Bgee:Q9U5L1
GermOnline:CG2522 Uniprot:Q9U5L1
Length = 614
Score = 245 (91.3 bits), Expect = 8.7e-18, P = 8.7e-18
Identities = 77/250 (30%), Positives = 124/250 (49%)
Query: 140 EQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTV 199
++A+ L+R + P ++ + I+RD L G RP I+ G+ GVGK+T
Sbjct: 363 KEALTESLVRILSPKRR-IDIIRDALESKRNG----------RPYTIIFCGVNGVGKSTN 411
Query: 200 SAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG-------------VPVYTAGT 246
AK+ +L + + ++ A D +R A++QL + V +Y G
Sbjct: 412 LAKICFWLIENDFNVLIAACDTFRAGAVEQLRTHTRHLNALHPAAKHDGRNMVQLYEKGY 471
Query: 247 EVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAM 306
+ IA + ++ A VDVV+VDTAGR+Q ++ +M L + +V NP VL V +A+
Sbjct: 472 GKDAAGIAMEAIKFAHDTRVDVVLVDTAGRMQDNEPLMRSLSKLIKVNNPDLVLFVGEAL 531
Query: 307 TGQEAAALVTTFNIEIG----------ITGAILTKLDG-DSRGGAALSVKEVSGKPIKLV 355
G EA + FN + I G +LTK D D + GAA+S+ ++G+PI V
Sbjct: 532 VGNEAVDQLVKFNQSLADYSSNENPHIIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFV 591
Query: 356 GRGERMEDLE 365
G G+ DL+
Sbjct: 592 GTGQTYADLK 601
>MGI|MGI:1914648 [details] [associations]
symbol:Srpr "signal recognition particle receptor ('docking
protein')" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005047 "signal recognition particle binding" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005785 "signal recognition particle
receptor complex" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR007222
InterPro:IPR011012 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
Pfam:PF04086 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 MGI:MGI:1914648 GO:GO:0005525 GO:GO:0003924
SUPFAM:SSF64356 eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364
KO:K13431 GO:GO:0005785 GO:GO:0005047 CTD:6734 HOGENOM:HOG000201671
HOVERGEN:HBG047566 OrthoDB:EOG4W0XCP GeneTree:ENSGT00550000074936
OMA:KEGSDGP EMBL:AK004967 EMBL:AK038017 EMBL:BC012512 EMBL:BC021839
IPI:IPI00119695 RefSeq:NP_080406.1 UniGene:Mm.284688
ProteinModelPortal:Q9DBG7 SMR:Q9DBG7 STRING:Q9DBG7
PhosphoSite:Q9DBG7 PaxDb:Q9DBG7 PRIDE:Q9DBG7
Ensembl:ENSMUST00000034541 GeneID:67398 KEGG:mmu:67398
UCSC:uc009osy.1 InParanoid:Q9DBG7 NextBio:324466 Bgee:Q9DBG7
Genevestigator:Q9DBG7 GermOnline:ENSMUSG00000032042 Uniprot:Q9DBG7
Length = 636
Score = 239 (89.2 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 79/254 (31%), Positives = 128/254 (50%)
Query: 135 VQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGV 194
V + +QA+ L++ ++P Q+ V ++RD +M + + RP V+ G+ GV
Sbjct: 379 VTSTVKQALQESLVQILQP-QRRVDMLRD----IMDAQ------RRQRPYVVTFCGVNGV 427
Query: 195 GKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQL-------VIL------GEQVGVPV 241
GK+T AK++ +L + G S ++ A D +R A++QL L G + V +
Sbjct: 428 GKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLTALHPPEKHGGRTMVQL 487
Query: 242 YTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLL 301
+ G + IA + + A+ + DVV+VDTAGR+Q + +M L + V P VL
Sbjct: 488 FEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLF 547
Query: 302 VVDAMTGQEAAALVTTFNIEIG----------ITGAILTKLDG-DSRGGAALSVKEVSGK 350
V +A+ G EA + FN + I G +LTK D D + GAA+S+ ++ K
Sbjct: 548 VGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSK 607
Query: 351 PIKLVGRGERMEDL 364
PI VG G+ DL
Sbjct: 608 PIVFVGTGQTYCDL 621
>RGD|1311504 [details] [associations]
symbol:Srpr "signal recognition particle receptor ('docking
protein')" species:10116 "Rattus norvegicus" [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0005047 "signal recognition particle
binding" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005785 "signal recognition particle receptor complex"
evidence=IEA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
RGD:1311504 GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356
eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364 KO:K13431
GO:GO:0005785 GO:GO:0005047 CTD:6734 HOGENOM:HOG000201671
HOVERGEN:HBG047566 OrthoDB:EOG4W0XCP GeneTree:ENSGT00550000074936
OMA:KEGSDGP EMBL:BC105782 IPI:IPI00362579 RefSeq:NP_001029322.1
UniGene:Rn.18349 SMR:Q3KRC3 STRING:Q3KRC3
Ensembl:ENSRNOT00000015177 GeneID:315548 KEGG:rno:315548
UCSC:RGD:1311504 InParanoid:Q3KRC3 NextBio:669402
Genevestigator:Q3KRC3 Uniprot:Q3KRC3
Length = 636
Score = 239 (89.2 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 79/254 (31%), Positives = 128/254 (50%)
Query: 135 VQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGV 194
V + +QA+ L++ ++P Q+ V ++RD +M + + RP V+ G+ GV
Sbjct: 379 VTSTVKQALQESLVQILQP-QRRVDMLRD----IMDAQ------RRQRPYVVTFCGVNGV 427
Query: 195 GKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQL-------VIL------GEQVGVPV 241
GK+T AK++ +L + G S ++ A D +R A++QL L G + V +
Sbjct: 428 GKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLTALHPPEKHGGRTMVQL 487
Query: 242 YTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLL 301
+ G + IA + + A+ + DVV+VDTAGR+Q + +M L + V P VL
Sbjct: 488 FEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLF 547
Query: 302 VVDAMTGQEAAALVTTFNIEIG----------ITGAILTKLDG-DSRGGAALSVKEVSGK 350
V +A+ G EA + FN + I G +LTK D D + GAA+S+ ++ K
Sbjct: 548 VGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSK 607
Query: 351 PIKLVGRGERMEDL 364
PI VG G+ DL
Sbjct: 608 PIVFVGTGQTYCDL 621
>ZFIN|ZDB-GENE-030219-11 [details] [associations]
symbol:srpr "signal recognition particle receptor
(docking protein)" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0005785 "signal recognition particle receptor
complex" evidence=IEA] [GO:0006614 "SRP-dependent cotranslational
protein targeting to membrane" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005047
"signal recognition particle binding" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
ZFIN:ZDB-GENE-030219-11 GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356
GO:GO:0006614 SUPFAM:SSF47364 KO:K13431 GO:GO:0005785 GO:GO:0005047
CTD:6734 GeneTree:ENSGT00550000074936 EMBL:CU469519 IPI:IPI00799782
RefSeq:XP_697518.3 UniGene:Dr.79180 Ensembl:ENSDART00000086823
GeneID:569063 KEGG:dre:569063 NextBio:20889487 Uniprot:E7EZW6
Length = 650
Score = 238 (88.8 bits), Expect = 6.0e-17, P = 6.0e-17
Identities = 78/254 (30%), Positives = 128/254 (50%)
Query: 135 VQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGV 194
V + +QA+ L++ ++P ++ V I+RD L E ++ +P VI G+ GV
Sbjct: 393 VASTVKQALQDSLVQILQPKRR-VDILRDVL------EAR----SQRKPFVITFCGVNGV 441
Query: 195 GKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL-------------GEQVGVPV 241
GK+T AK++ +L + G + ++ A D +R A++QL G Q V +
Sbjct: 442 GKSTNLAKISYWLIENGFTVLIAACDTFRAGAVEQLRTHQRRLNSLHPPEKHGGQPAVQL 501
Query: 242 YTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLL 301
+ G + IA + + A+ + DVV++DTAGR+Q + +M L + V P VL
Sbjct: 502 FEKGYGKDAAGIAMEAIAFARNQGFDVVLIDTAGRMQDNAPLMTALAKLIAVNTPDLVLF 561
Query: 302 VVDAMTGQEAAALVTTFNIEIG----------ITGAILTKLDG-DSRGGAALSVKEVSGK 350
V +A+ G EA + FN + I G +LTK D D + GAA+S+ ++G+
Sbjct: 562 VGEALVGNEAVDQLVKFNRALADHSKSDKPRLIDGIVLTKFDTIDDKVGAAISMTYITGQ 621
Query: 351 PIKLVGRGERMEDL 364
PI VG G+ DL
Sbjct: 622 PIVFVGTGQTYSDL 635
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 40/156 (25%), Positives = 84/156 (53%)
Query: 86 GQLTSGLEAAWNKLKG---EETLTKENIVEPMRD-IRRALLEADVSLPVVRRFVQAVSEQ 141
G SG + LKG + LT+E++ EP+ D ++ L+ +V+ + + +V+++
Sbjct: 323 GAKRSGFGGMFGMLKGLVGSKNLTQEDM-EPVLDKMKDHLIAKNVAAEIASQLCDSVAKK 381
Query: 142 AVGVGLIRGVRPDQQLVKIVRDELVKLMGGE-----VSELVFAKS--RPTVILLAGLQGV 194
G + + + ++D LV+++ + + +++ A+S +P VI G+ GV
Sbjct: 382 LEGKVMGTFTTVASTVKQALQDSLVQILQPKRRVDILRDVLEARSQRKPFVITFCGVNGV 441
Query: 195 GKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQL 230
GK+T AK++ +L + G + ++ A D +R A++QL
Sbjct: 442 GKSTNLAKISYWLIENGFTVLIAACDTFRAGAVEQL 477
>UNIPROTKB|P08240 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9606 "Homo sapiens" [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005047 "signal recognition particle binding"
evidence=IEA] [GO:0005785 "signal recognition particle receptor
complex" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=TAS] [GO:0006613
"cotranslational protein targeting to membrane" evidence=TAS]
[GO:0016021 "integral to membrane" evidence=TAS] [GO:0005789
"endoplasmic reticulum membrane" evidence=TAS] [GO:0006412
"translation" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0006987 "activation of signaling protein activity involved in
unfolded protein response" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0030968 "endoplasmic reticulum
unfolded protein response" evidence=TAS] [GO:0044267 "cellular
protein metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_17015 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR007222 InterPro:IPR011012 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF04086 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0016021 Reactome:REACT_116125 GO:GO:0006987 EMBL:CH471065
GO:GO:0006412 GO:GO:0003924 SUPFAM:SSF64356 eggNOG:COG0552
GO:GO:0006614 SUPFAM:SSF47364 KO:K13431 GO:GO:0005785 GO:GO:0005047
PDB:2GO5 PDBsum:2GO5 PDB:2FH5 PDBsum:2FH5 CTD:6734
HOGENOM:HOG000201671 HOVERGEN:HBG047566 OrthoDB:EOG4W0XCP
EMBL:X06272 EMBL:AK312377 EMBL:AP001318 EMBL:BC001162 EMBL:BC009110
EMBL:BC013583 IPI:IPI00385267 PIR:A29440 RefSeq:NP_001171313.1
RefSeq:NP_003130.2 UniGene:Hs.368376 ProteinModelPortal:P08240
SMR:P08240 IntAct:P08240 MINT:MINT-1404634 STRING:P08240
PhosphoSite:P08240 DMDM:20455516 PaxDb:P08240 PRIDE:P08240
DNASU:6734 Ensembl:ENST00000332118 GeneID:6734 KEGG:hsa:6734
UCSC:uc001qdh.3 GeneCards:GC11M126132 HGNC:HGNC:11307 MIM:182180
neXtProt:NX_P08240 PharmGKB:PA36131 InParanoid:P08240 OMA:KEGSDGP
ChiTaRS:SRPR EvolutionaryTrace:P08240 GenomeRNAi:6734 NextBio:26272
ArrayExpress:P08240 Bgee:P08240 CleanEx:HS_SRPR
Genevestigator:P08240 GermOnline:ENSG00000182934 Uniprot:P08240
Length = 638
Score = 237 (88.5 bits), Expect = 7.5e-17, P = 7.5e-17
Identities = 79/254 (31%), Positives = 128/254 (50%)
Query: 135 VQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGV 194
V + +QA+ L++ ++P Q+ V ++RD +M + + RP V+ G+ GV
Sbjct: 381 VTSTVKQALQESLVQILQP-QRRVDMLRD----IMDAQ------RRQRPYVVTFCGVNGV 429
Query: 195 GKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQL-------VIL------GEQVGVPV 241
GK+T AK++ +L + G S ++ A D +R A++QL L G + V +
Sbjct: 430 GKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQL 489
Query: 242 YTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLL 301
+ G + IA + + A+ + DVV+VDTAGR+Q + +M L + V P VL
Sbjct: 490 FEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLF 549
Query: 302 VVDAMTGQEAAALVTTFNIEIG----------ITGAILTKLDG-DSRGGAALSVKEVSGK 350
V +A+ G EA + FN + I G +LTK D D + GAA+S+ ++ K
Sbjct: 550 VGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSK 609
Query: 351 PIKLVGRGERMEDL 364
PI VG G+ DL
Sbjct: 610 PIVFVGTGQTYCDL 623
>UNIPROTKB|F1NXV4 [details] [associations]
symbol:SRPR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0005047
"signal recognition particle binding" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0005785 "signal recognition
particle receptor complex" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR007222
InterPro:IPR011012 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
Pfam:PF04086 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005785 GO:GO:0005047
OMA:LILWSSC GeneTree:ENSGT00550000074936 EMBL:AADN02042027
IPI:IPI00593518 Ensembl:ENSGALT00000001579 Uniprot:F1NXV4
Length = 644
Score = 236 (88.1 bits), Expect = 9.9e-17, P = 9.9e-17
Identities = 79/254 (31%), Positives = 126/254 (49%)
Query: 135 VQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGV 194
V + +QA+ L++ ++P Q+ V ++RD +M + RP V+ G+ GV
Sbjct: 387 VTSTVKQALQEALVQILQP-QRRVDVLRD----VMDAQ------RHRRPYVVTFCGVNGV 435
Query: 195 GKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL-------------GEQVGVPV 241
GK+T AK++ +L + G S ++ A D +R A++QL G + V +
Sbjct: 436 GKSTNLAKISFWLIENGFSVLIAACDTFRAGAVEQLRTHTRRLNALHPPESHGGRTMVQL 495
Query: 242 YTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLL 301
Y G + IA + + A+ + DVV+VDTAGR+Q + +M L + V P VL
Sbjct: 496 YEKGYGKDAAGIAMEAISYARNQGFDVVLVDTAGRMQDNAPLMTALAKLIAVNAPDLVLF 555
Query: 302 VVDAMTGQEAAALVTTFNIEIG----------ITGAILTKLDG-DSRGGAALSVKEVSGK 350
V +A+ G EA + FN + I G +LTK D D + GAA+S+ ++ K
Sbjct: 556 VGEALVGNEAVDQLVKFNKALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSK 615
Query: 351 PIKLVGRGERMEDL 364
PI VG G+ DL
Sbjct: 616 PIVFVGTGQTYCDL 629
>UNIPROTKB|Q3V8C7 [details] [associations]
symbol:flhF "Flagellar biogenesis protein FlhF"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR020006 Pfam:PF00448 SMART:SM00382
SMART:SM00962 GO:GO:0005525 GO:GO:0005886 GO:GO:0019861
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0043064
GO:GO:0006614 KO:K02404 HOGENOM:HOG000254735 RefSeq:NP_954097.2
ProteinModelPortal:Q3V8C7 GeneID:2686907 KEGG:gsu:GSU3055
PATRIC:22028961 OMA:YRNELLV ProtClustDB:CLSK829079
BioCyc:GSUL243231:GH27-2995-MONOMER TIGRFAMs:TIGR03499
Uniprot:Q3V8C7
Length = 451
Score = 232 (86.7 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 67/206 (32%), Positives = 104/206 (50%)
Query: 176 LVFAKSRPTVILLAGLQGVGKTTVSAKLA-NYLKKQGKSCMLVAGDVYRPAAIDQLVILG 234
L K+ P +I L G GVGKTT AKLA +Y ++G L+ D +R A++QL
Sbjct: 249 LTVKKNGPRIIALVGPTGVGKTTTIAKLAAHYALREGHRAALITIDNFRVGAVEQLKTYS 308
Query: 235 EQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVL 294
+GVPV A T + + +E K +++++DTAGR D ++ELK
Sbjct: 309 RIMGVPVEVAATAAE----LEAAIELHSDK--ELILIDTAGRSHKDSEKIEELKGFLESR 362
Query: 295 NPTEVLLVVDAMT-GQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 353
E+ L + A T +E +V F + + ++ I TKLD G+ ++ + P+
Sbjct: 363 FAIEIHLCLAATTRDREVLEIVERFGV-LSVSRVIFTKLDESESYGSIVNAHLRTKFPLS 421
Query: 354 LVGRGERM-EDLEPFYPDRMAGRILG 378
G+R+ EDLE P R+AG +LG
Sbjct: 422 YFTTGQRVPEDLEIATPGRLAGLVLG 447
>TIGR_CMR|GSU_3055 [details] [associations]
symbol:GSU_3055 "flagellar biosynthetic protein FlhF,
putative" species:243231 "Geobacter sulfurreducens PCA" [GO:0001539
"ciliary or flagellar motility" evidence=ISS] [GO:0003674
"molecular_function" evidence=ND] [GO:0009288 "bacterial-type
flagellum" evidence=ISS] [GO:0009296 "flagellum assembly"
evidence=ISS] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR020006 Pfam:PF00448 SMART:SM00382 SMART:SM00962
GO:GO:0005525 GO:GO:0005886 GO:GO:0019861 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0043064 GO:GO:0006614
KO:K02404 HOGENOM:HOG000254735 RefSeq:NP_954097.2
ProteinModelPortal:Q3V8C7 GeneID:2686907 KEGG:gsu:GSU3055
PATRIC:22028961 OMA:YRNELLV ProtClustDB:CLSK829079
BioCyc:GSUL243231:GH27-2995-MONOMER TIGRFAMs:TIGR03499
Uniprot:Q3V8C7
Length = 451
Score = 232 (86.7 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 67/206 (32%), Positives = 104/206 (50%)
Query: 176 LVFAKSRPTVILLAGLQGVGKTTVSAKLA-NYLKKQGKSCMLVAGDVYRPAAIDQLVILG 234
L K+ P +I L G GVGKTT AKLA +Y ++G L+ D +R A++QL
Sbjct: 249 LTVKKNGPRIIALVGPTGVGKTTTIAKLAAHYALREGHRAALITIDNFRVGAVEQLKTYS 308
Query: 235 EQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVL 294
+GVPV A T + + +E K +++++DTAGR D ++ELK
Sbjct: 309 RIMGVPVEVAATAAE----LEAAIELHSDK--ELILIDTAGRSHKDSEKIEELKGFLESR 362
Query: 295 NPTEVLLVVDAMT-GQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 353
E+ L + A T +E +V F + + ++ I TKLD G+ ++ + P+
Sbjct: 363 FAIEIHLCLAATTRDREVLEIVERFGV-LSVSRVIFTKLDESESYGSIVNAHLRTKFPLS 421
Query: 354 LVGRGERM-EDLEPFYPDRMAGRILG 378
G+R+ EDLE P R+AG +LG
Sbjct: 422 YFTTGQRVPEDLEIATPGRLAGLVLG 447
>UNIPROTKB|F1S754 [details] [associations]
symbol:SRPR "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0005785 "signal
recognition particle receptor complex" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0005047 "signal recognition
particle binding" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR007222 InterPro:IPR011012 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF04086 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0003924 SUPFAM:SSF64356 GO:GO:0006614 SUPFAM:SSF47364
GO:GO:0005785 GO:GO:0005047 GeneTree:ENSGT00550000074936
OMA:KEGSDGP EMBL:CU466237 EMBL:FP102836 EMBL:GACC01000039
Ensembl:ENSSSCT00000016593 Uniprot:F1S754
Length = 638
Score = 234 (87.4 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 79/254 (31%), Positives = 128/254 (50%)
Query: 135 VQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGV 194
V + +QA+ L++ ++P Q+ V ++RD +M + + RP V+ G+ GV
Sbjct: 381 VTSTVKQALQESLVQILQP-QRRVDMLRD----IMDAQRHQ------RPYVVTFCGVNGV 429
Query: 195 GKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQL-------VIL------GEQVGVPV 241
GK+T AK++ +L + G S ++ A D +R A++QL L G + V +
Sbjct: 430 GKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLSALHPPENHGGRTMVQL 489
Query: 242 YTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLL 301
+ G + IA + + A+ + DVV+VDTAGR+Q + +M L + V P VL
Sbjct: 490 FEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLF 549
Query: 302 VVDAMTGQEAAALVTTFNIEIG----------ITGAILTKLDG-DSRGGAALSVKEVSGK 350
V +A+ G EA + FN + I G +LTK D D + GAA+S+ ++ K
Sbjct: 550 VGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSK 609
Query: 351 PIKLVGRGERMEDL 364
PI VG G+ DL
Sbjct: 610 PIVFVGTGQTYCDL 623
>UNIPROTKB|Q3MHE8 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9913 "Bos taurus" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0005785 "signal
recognition particle receptor complex" evidence=IEA] [GO:0005047
"signal recognition particle binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356 eggNOG:COG0552
GO:GO:0006614 SUPFAM:SSF47364 KO:K13431 GO:GO:0005785 GO:GO:0005047
EMBL:BC105264 IPI:IPI00695733 RefSeq:NP_001068590.1 UniGene:Bt.5518
HSSP:P08240 ProteinModelPortal:Q3MHE8 SMR:Q3MHE8 STRING:Q3MHE8
PRIDE:Q3MHE8 GeneID:281504 KEGG:bta:281504 CTD:6734
HOGENOM:HOG000201671 HOVERGEN:HBG047566 InParanoid:Q3MHE8
OrthoDB:EOG4W0XCP NextBio:20805473 Uniprot:Q3MHE8
Length = 639
Score = 234 (87.4 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 79/254 (31%), Positives = 128/254 (50%)
Query: 135 VQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGV 194
V + +QA+ L++ ++P Q+ V ++RD +M + + RP V+ G+ GV
Sbjct: 382 VTSTVKQALQESLVQILQP-QRRVDMLRD----IMDAQRHQ------RPYVVTFCGVNGV 430
Query: 195 GKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQL-------VIL------GEQVGVPV 241
GK+T AK++ +L + G S ++ A D +R A++QL L G + V +
Sbjct: 431 GKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQL 490
Query: 242 YTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLL 301
+ G + IA + + A+ + DVV+VDTAGR+Q + +M L + V P VL
Sbjct: 491 FEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLF 550
Query: 302 VVDAMTGQEAAALVTTFNIEIG----------ITGAILTKLDG-DSRGGAALSVKEVSGK 350
V +A+ G EA + FN + I G +LTK D D + GAA+S+ ++ K
Sbjct: 551 VGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSK 610
Query: 351 PIKLVGRGERMEDL 364
PI VG G+ DL
Sbjct: 611 PIVFVGTGQTYCDL 624
Score = 122 (48.0 bits), Expect = 0.00036, P = 0.00036
Identities = 35/141 (24%), Positives = 78/141 (55%)
Query: 99 LKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG--VGLIRGVRPDQQ 156
L G ++LT+E++ + +R L+ +V+ + + ++V+ + G +G V
Sbjct: 328 LVGSKSLTREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVT--ST 385
Query: 157 LVKIVRDELVKLMGGE-----VSELVFAK--SRPTVILLAGLQGVGKTTVSAKLANYLKK 209
+ + +++ LV+++ + + +++ A+ RP V+ G+ GVGK+T AK++ +L +
Sbjct: 386 VKQALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLE 445
Query: 210 QGKSCMLVAGDVYRPAAIDQL 230
G S ++ A D +R A++QL
Sbjct: 446 NGFSVLIAACDTFRAGAVEQL 466
>UNIPROTKB|J9NTJ9 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9615 "Canis lupus familiaris" [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0005785 "signal recognition particle receptor
complex" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005047 "signal recognition particle binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005785 GO:GO:0005047
GeneTree:ENSGT00550000074936 EMBL:AAEX03003376 EMBL:AAEX03003378
EMBL:AAEX03003377 EMBL:AAEX03003379 Ensembl:ENSCAFT00000045313
Uniprot:J9NTJ9
Length = 637
Score = 232 (86.7 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 80/254 (31%), Positives = 129/254 (50%)
Query: 135 VQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGV 194
V + +QA+ L++ ++P Q+ V ++RD +M + + RP V+ G+ GV
Sbjct: 380 VTSTVKQALQESLVQILQP-QRRVDMLRD----IMDAQRHQ------RPYVVTFCGVNGV 428
Query: 195 GKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGV---PVYTAG-TEVK- 249
GK+T AK++ +L + G S ++ A D +R A++QL ++ P AG T V+
Sbjct: 429 GKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLSALHPPEKHAGRTMVQL 488
Query: 250 --------PSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLL 301
+ IA + + A+ + DVV+VDTAGR+Q + +M L + V P VL
Sbjct: 489 FEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLF 548
Query: 302 VVDAMTGQEAAALVTTFNIEIG----------ITGAILTKLDG-DSRGGAALSVKEVSGK 350
V +A+ G EA + FN + I G +LTK D D + GAA+S+ ++ K
Sbjct: 549 VGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSK 608
Query: 351 PIKLVGRGERMEDL 364
PI VG G+ DL
Sbjct: 609 PIVFVGTGQTYCDL 622
>UNIPROTKB|F1PLH3 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9615 "Canis lupus familiaris" [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0005785 "signal recognition particle receptor
complex" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005047 "signal recognition particle binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356 GO:GO:0006614
SUPFAM:SSF47364 KO:K13431 GO:GO:0005785 GO:GO:0005047 CTD:6734
GeneTree:ENSGT00550000074936 EMBL:AAEX03003376 EMBL:AAEX03003378
EMBL:AAEX03003377 EMBL:AAEX03003379 RefSeq:XP_546411.3
Ensembl:ENSCAFT00000016629 GeneID:489293 KEGG:cfa:489293
Uniprot:F1PLH3
Length = 638
Score = 232 (86.7 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 80/254 (31%), Positives = 129/254 (50%)
Query: 135 VQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGV 194
V + +QA+ L++ ++P Q+ V ++RD +M + + RP V+ G+ GV
Sbjct: 381 VTSTVKQALQESLVQILQP-QRRVDMLRD----IMDAQRHQ------RPYVVTFCGVNGV 429
Query: 195 GKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGV---PVYTAG-TEVK- 249
GK+T AK++ +L + G S ++ A D +R A++QL ++ P AG T V+
Sbjct: 430 GKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLSALHPPEKHAGRTMVQL 489
Query: 250 --------PSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLL 301
+ IA + + A+ + DVV+VDTAGR+Q + +M L + V P VL
Sbjct: 490 FEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLF 549
Query: 302 VVDAMTGQEAAALVTTFNIEIG----------ITGAILTKLDG-DSRGGAALSVKEVSGK 350
V +A+ G EA + FN + I G +LTK D D + GAA+S+ ++ K
Sbjct: 550 VGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSK 609
Query: 351 PIKLVGRGERMEDL 364
PI VG G+ DL
Sbjct: 610 PIVFVGTGQTYCDL 623
>UNIPROTKB|J9P788 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9615 "Canis lupus familiaris" [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0005785 "signal recognition particle receptor
complex" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005047 "signal recognition particle binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005785 GO:GO:0005047
GeneTree:ENSGT00550000074936 OMA:KEGSDGP EMBL:AAEX03003376
EMBL:AAEX03003378 EMBL:AAEX03003377 EMBL:AAEX03003379
Ensembl:ENSCAFT00000047935 Uniprot:J9P788
Length = 773
Score = 232 (86.7 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 80/254 (31%), Positives = 129/254 (50%)
Query: 135 VQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGV 194
V + +QA+ L++ ++P Q+ V ++RD +M + + RP V+ G+ GV
Sbjct: 516 VTSTVKQALQESLVQILQP-QRRVDMLRD----IMDAQRHQ------RPYVVTFCGVNGV 564
Query: 195 GKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGV---PVYTAG-TEVK- 249
GK+T AK++ +L + G S ++ A D +R A++QL ++ P AG T V+
Sbjct: 565 GKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLSALHPPEKHAGRTMVQL 624
Query: 250 --------PSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLL 301
+ IA + + A+ + DVV+VDTAGR+Q + +M L + V P VL
Sbjct: 625 FEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLF 684
Query: 302 VVDAMTGQEAAALVTTFNIEIG----------ITGAILTKLDG-DSRGGAALSVKEVSGK 350
V +A+ G EA + FN + I G +LTK D D + GAA+S+ ++ K
Sbjct: 685 VGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSK 744
Query: 351 PIKLVGRGERMEDL 364
PI VG G+ DL
Sbjct: 745 PIVFVGTGQTYCDL 758
>ASPGD|ASPL0000006202 [details] [associations]
symbol:AN6627 species:162425 "Emericella nidulans"
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0005785
"signal recognition particle receptor complex" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0045047 "protein targeting to ER" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005047 "signal
recognition particle binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 EMBL:BN001301 SUPFAM:SSF64356
EMBL:AACD01000110 eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364
KO:K13431 GO:GO:0005785 GO:GO:0005047 HOGENOM:HOG000201671
OrthoDB:EOG42Z7ZQ RefSeq:XP_664231.1 ProteinModelPortal:Q5AYK3
STRING:Q5AYK3 EnsemblFungi:CADANIAT00007408 GeneID:2870372
KEGG:ani:AN6627.2 OMA:THETGRR Uniprot:Q5AYK3
Length = 636
Score = 230 (86.0 bits), Expect = 4.5e-16, P = 4.5e-16
Identities = 62/200 (31%), Positives = 99/200 (49%)
Query: 181 SRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILG------ 234
SRP VI + G+ GVGK+T K+ +L + ++ A D +R A++QL +
Sbjct: 424 SRPYVISIVGVNGVGKSTNLGKICYFLLQNNYRILIAACDTFRSGAVEQLRVHARNLKEL 483
Query: 235 ---EQVG-VPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDV 290
E VG V +Y G + +AK +E N DVV++DTAGR D+ +M L+
Sbjct: 484 SARENVGAVELYEKGYGKDAANVAKDAVEYGAANNFDVVLIDTAGRRHNDQRLMSSLEKF 543
Query: 291 KRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIG----ITGAILTKLD--GDSRGGAALSV 344
+ P ++ +V +A+ G ++ FN G + G I++K D GD G +S+
Sbjct: 544 AKFAQPNKIFMVGEALVGTDSVMQARNFNQAFGTGRNLDGFIISKCDTVGDMVG-TLVSM 602
Query: 345 KEVSGKPIKLVGRGERMEDL 364
+G PI +G G+ DL
Sbjct: 603 VHATGIPIVFLGVGQHYGDL 622
Score = 120 (47.3 bits), Expect = 0.00060, P = 0.00060
Identities = 43/162 (26%), Positives = 76/162 (46%)
Query: 86 GQLTSGLEAAWNKLK---GEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQA 142
G + SG A L+ G + LT+ ++ +P++ + LL+ +V+ R + V ++
Sbjct: 314 GLVGSGFSAIGGLLRNIVGGKILTEADLEKPLKAMEDHLLKKNVAREAAVRLCEGVKQEL 373
Query: 143 VG--VGLIRGVRPDQQLVKIVRDELVKLMGG--------EVSELVFAK----SRPTVILL 188
VG G + V D L + L K++ E+ + A SRP VI +
Sbjct: 374 VGKKTGNFQSV--DAALKSAMESSLRKILTPTSSLDLLHEIDTVTKANKQGTSRPYVISI 431
Query: 189 AGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQL 230
G+ GVGK+T K+ +L + ++ A D +R A++QL
Sbjct: 432 VGVNGVGKSTNLGKICYFLLQNNYRILIAACDTFRSGAVEQL 473
>UNIPROTKB|P06625 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9615 "Canis lupus familiaris" [GO:0005789
"endoplasmic reticulum membrane" evidence=TAS] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0006614 "SRP-dependent cotranslational
protein targeting to membrane" evidence=IEA] [GO:0005785 "signal
recognition particle receptor complex" evidence=IEA] [GO:0005047
"signal recognition particle binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] Reactome:REACT_86357
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR007222
InterPro:IPR011012 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
Pfam:PF04086 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0005789 GO:GO:0003924
SUPFAM:SSF64356 eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364
GO:GO:0005785 Reactome:REACT_146484 GO:GO:0005047
HOGENOM:HOG000201671 HOVERGEN:HBG047566 OrthoDB:EOG4W0XCP
EMBL:X03184 PIR:A24570 ProteinModelPortal:P06625 SMR:P06625
STRING:P06625 PRIDE:P06625 InParanoid:P06625 Uniprot:P06625
Length = 638
Score = 226 (84.6 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 78/254 (30%), Positives = 128/254 (50%)
Query: 135 VQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGV 194
V + +QA+ L++ ++P Q+ V ++RD +M + + RP V+ G+ GV
Sbjct: 381 VTSTVKQALQESLVQILQP-QRRVDMLRD----IMDAQRHQ------RPYVVTFCGVNGV 429
Query: 195 GKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAID-------QLVILG---EQVG---VPV 241
GK+T AK++ +L + G S ++ A D +R A++ +L L + G V +
Sbjct: 430 GKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEHVRTHTRRLSALHPPEKHAGPTMVQL 489
Query: 242 YTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLL 301
+ G + IA + + A+ + DVV+VDTAGR+Q + +M L + V P VL
Sbjct: 490 FEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLF 549
Query: 302 VVDAMTGQEAAALVTTFNIEIG----------ITGAILTKLDG-DSRGGAALSVKEVSGK 350
V +A+ G EA + FN + I G +LTK D D + GAA+S+ ++ K
Sbjct: 550 VGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSK 609
Query: 351 PIKLVGRGERMEDL 364
PI VG G+ DL
Sbjct: 610 PIVFVGTGQTYCDL 623
>POMBASE|SPBC3B9.03 [details] [associations]
symbol:SPBC3B9.03 "signal recognition particle receptor
alpha subunit Srp101 (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0003924 "GTPase activity" evidence=ISM] [GO:0005047
"signal recognition particle binding" evidence=ISO] [GO:0005525
"GTP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005785 "signal recognition particle receptor complex"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IC] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR007222 InterPro:IPR011012 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF04086 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 PomBase:SPBC3B9.03
GO:GO:0005525 GO:GO:0005829 GO:GO:0005634 EMBL:CU329671
GO:GO:0003924 GenomeReviews:CU329671_GR SUPFAM:SSF64356
eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364 KO:K13431
GO:GO:0005785 GO:GO:0005047 HSSP:Q6MTB9 HOGENOM:HOG000201671
PIR:T40342 RefSeq:NP_596660.1 ProteinModelPortal:O43032
STRING:O43032 EnsemblFungi:SPBC3B9.03.1 GeneID:2540909
KEGG:spo:SPBC3B9.03 OMA:PVEANND OrthoDB:EOG42Z7ZQ NextBio:20802024
Uniprot:O43032
Length = 547
Score = 216 (81.1 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 73/302 (24%), Positives = 142/302 (47%)
Query: 96 WNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG--VGLIRGVRP 153
++ L G + L +E++ ++ ++ L + +V+ + ++V + VG V+
Sbjct: 247 FSNLIGGKYLKEEDLSPILKQMQEHLTKKNVANSIALELCESVKASLINKKVGSFDTVK- 305
Query: 154 DQQLVKIVRDELVKLMGGEVS-ELVFA-------KSRPTVILLAGLQGVGKTTVSAKLAN 205
+ K RD L +++ S +L+ + ++RP I L G+ GVGK+T AK+A
Sbjct: 306 -NTVNKAFRDRLTQILTPSTSLDLLHSIRSVRKNENRPYTISLIGVNGVGKSTTLAKIAY 364
Query: 206 YLKKQGKSCMLVAGDVYRPAAIDQLVI----LGEQVG--VPVYTAGTEVKPSQIAKQGLE 259
+L ++ A D +R AI+QL + L G + ++ G S + K +E
Sbjct: 365 WLLSNNFRILVAACDTFRSGAIEQLGVHVKNLQSLKGSSIELFAQGYGKDSSFVVKNAVE 424
Query: 260 EAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFN 319
AK+ + DV+++DTAGR D+ +M L+ + ++ V +A+ G ++ A F
Sbjct: 425 YAKQNSFDVILIDTAGRRHNDQRLMGSLEKFTKATKLDKIFQVAEALVGTDSLAQAKHFQ 484
Query: 320 IEI---GITGAILTKLDGDSR-GGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGR 375
+ + G I++K+D + G + + PI VG G+ DL D + +
Sbjct: 485 ASLYHRPLDGFIISKVDTVGQLVGVMVGMVYAVRVPIIFVGIGQTYSDLRTLSVDWVVDQ 544
Query: 376 IL 377
++
Sbjct: 545 LM 546
>CGD|CAL0003010 [details] [associations]
symbol:orf19.3952 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0045047 "protein targeting to ER" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0005047 "signal recognition
particle binding" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF04086 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 CGD:CAL0003010 GO:GO:0005525
GO:GO:0003924 EMBL:AACQ01000012 eggNOG:COG0552 GO:GO:0006614
SUPFAM:SSF47364 KO:K13431 GO:GO:0005785 GO:GO:0005047
RefSeq:XP_721861.1 ProteinModelPortal:Q5AK68 STRING:Q5AK68
GeneID:3636513 KEGG:cal:CaO19.3952 Uniprot:Q5AK68
Length = 535
Score = 205 (77.2 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 62/230 (26%), Positives = 114/230 (49%)
Query: 156 QLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCM 215
+L KI+ + + ++ +RP VI + G+ GVGK+T AKLA + + + +
Sbjct: 294 ELTKILTPNVSTDLLHDIKRNAELNTRPYVISVVGVNGVGKSTNLAKLAFWFLQNNLNVL 353
Query: 216 LVAGDVYRPAAIDQLVI-------LGE-----QVGVPVYTAG--TEVKPSQIAKQGLEEA 261
+ A D +R A++QL + L E + + ++ G + Q AKQ ++ A
Sbjct: 354 ICACDTFRSGAVEQLKVHVNNLNRLNEASTNTKSRIDIFEKGYGSGDHVVQTAKQAVQYA 413
Query: 262 KKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIE 321
++ D+V++DTAGR + +M LK NP ++++V +A+ G ++ T FN
Sbjct: 414 EENKFDIVLIDTAGRTHSNAKLMAPLKKFGDAANPNKIIMVGEALVGTDSVEQATNFNKA 473
Query: 322 IG----ITGAILTKLD--GDSRGGAALSVKEVSGKPIKLVGRGERMEDLE 365
G + I++K+D GD G +++ + PI VG G+ D++
Sbjct: 474 FGNKRTLDFFIISKVDTVGDLVG-TMINMVMATNVPILFVGTGQTYTDIK 522
>UNIPROTKB|Q48GG0 [details] [associations]
symbol:flhF "Flagellar biosynthesis protein FlhF"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0001539 "ciliary or flagellar motility" evidence=ISS]
[GO:0009288 "bacterial-type flagellum" evidence=ISS] [GO:0009296
"flagellum assembly" evidence=ISS] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR020006 Pfam:PF00448 SMART:SM00382
SMART:SM00962 GO:GO:0005525 GO:GO:0005886 GO:GO:0017111
EMBL:CP000058 GenomeReviews:CP000058_GR GO:GO:0009296 GO:GO:0001539
GO:GO:0009288 GO:GO:0006614 eggNOG:COG1419 KO:K02404
HOGENOM:HOG000254735 ProtClustDB:PRK05703 TIGRFAMs:TIGR03499
OMA:EPRQAWR RefSeq:YP_275523.1 ProteinModelPortal:Q48GG0
STRING:Q48GG0 GeneID:3559389 KEGG:psp:PSPPH_3365 PATRIC:19976136
Uniprot:Q48GG0
Length = 442
Score = 194 (73.4 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 63/182 (34%), Positives = 90/182 (49%)
Query: 185 VILLAGLQGVGKTTVSAKLA-NYLKKQG-KSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 242
VI + G G+GKTT AKLA Y+ K G ++ LV+ D +R A +QL LG + VPV
Sbjct: 224 VIAMVGPAGMGKTTTLAKLAARYVLKYGPQNIALVSMDSFRIGAQEQLKTLGRILNVPV- 282
Query: 243 TAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVK-RVLNPTEVLL 301
T V P Q Q LE +K V V++DTAG D A+ +L+ + R + L+
Sbjct: 283 ---THVDPGQSLVQALEPLLRKRV--VLIDTAGLQASDPALRMQLESLAGRGIKSRNYLV 337
Query: 302 VVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERM 361
+ Q A ++ G+ G ILTKLD + G LS+ P+ + G R+
Sbjct: 338 LATTSQKQVLTAAYHSYK-RCGLAGCILTKLDETASLGEVLSLAISHELPVAYLTDGPRI 396
Query: 362 ED 363
D
Sbjct: 397 PD 398
>UNIPROTKB|Q81SE2 [details] [associations]
symbol:BA_1718 "Putative flagellar biosynthetic protein
FlhF" species:1392 "Bacillus anthracis" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000897 InterPro:IPR003593 Pfam:PF00448
SMART:SM00382 GO:GO:0005525 GO:GO:0019861 EMBL:AE016879
GenomeReviews:AE016879_GR GO:GO:0017111 GO:GO:0006614 KO:K02404
RefSeq:NP_844153.1 ProteinModelPortal:Q81SE2 DNASU:1086348
EnsemblBacteria:EBBACT00000010753 GeneID:1086348 KEGG:ban:BA_1718
PATRIC:18781034 HOGENOM:HOG000133114 ProtClustDB:PRK06731
Uniprot:Q81SE2
Length = 270
Score = 183 (69.5 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 63/254 (24%), Positives = 118/254 (46%)
Query: 107 KENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELV 166
+E++ ++ + R L + DV + F+ A +E+ + V +++++ + +++
Sbjct: 8 QESVPFIIQKVIRMLEQNDVE----QYFIHAYAEK-LKVKFENATMITEEVIEYILEDMS 62
Query: 167 KLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAA 226
+E VF K T+ L+ G GVGKTT AK+A + K+ + D R
Sbjct: 63 SHFN---TENVFEKEVQTIALI-GPTGVGKTTTLAKMAWQFHGKKKTVGFITTDHSRIGT 118
Query: 227 IDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDE 286
+ QL + +G V E ++ EEA+ VD +++DTAG+ ++E
Sbjct: 119 VQQLQDYVKTIGFEVIAVRDEAAMTRALTYFKEEAR---VDYILIDTAGKNYRASETVEE 175
Query: 287 LKDVKRVLNPTEVLLVVDA-MTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVK 345
+ + + P + L + A M ++ ++T F +I I G + TK D + G L +
Sbjct: 176 MIETMGQVEPDYICLTLSASMKSKDMIEIITNFK-DIHIDGIVFTKFDETASSGELLKIP 234
Query: 346 EVSGKPIKLVGRGE 359
VS PI L+ G+
Sbjct: 235 AVSSAPIVLMTDGQ 248
>TIGR_CMR|BA_1718 [details] [associations]
symbol:BA_1718 "flagellar biosynthetic protein FlhF,
putative" species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000897 InterPro:IPR003593 Pfam:PF00448
SMART:SM00382 GO:GO:0005525 GO:GO:0019861 EMBL:AE016879
GenomeReviews:AE016879_GR GO:GO:0017111 GO:GO:0006614 KO:K02404
RefSeq:NP_844153.1 ProteinModelPortal:Q81SE2 DNASU:1086348
EnsemblBacteria:EBBACT00000010753 GeneID:1086348 KEGG:ban:BA_1718
PATRIC:18781034 HOGENOM:HOG000133114 ProtClustDB:PRK06731
Uniprot:Q81SE2
Length = 270
Score = 183 (69.5 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 63/254 (24%), Positives = 118/254 (46%)
Query: 107 KENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELV 166
+E++ ++ + R L + DV + F+ A +E+ + V +++++ + +++
Sbjct: 8 QESVPFIIQKVIRMLEQNDVE----QYFIHAYAEK-LKVKFENATMITEEVIEYILEDMS 62
Query: 167 KLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAA 226
+E VF K T+ L+ G GVGKTT AK+A + K+ + D R
Sbjct: 63 SHFN---TENVFEKEVQTIALI-GPTGVGKTTTLAKMAWQFHGKKKTVGFITTDHSRIGT 118
Query: 227 IDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDE 286
+ QL + +G V E ++ EEA+ VD +++DTAG+ ++E
Sbjct: 119 VQQLQDYVKTIGFEVIAVRDEAAMTRALTYFKEEAR---VDYILIDTAGKNYRASETVEE 175
Query: 287 LKDVKRVLNPTEVLLVVDA-MTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVK 345
+ + + P + L + A M ++ ++T F +I I G + TK D + G L +
Sbjct: 176 MIETMGQVEPDYICLTLSASMKSKDMIEIITNFK-DIHIDGIVFTKFDETASSGELLKIP 234
Query: 346 EVSGKPIKLVGRGE 359
VS PI L+ G+
Sbjct: 235 AVSSAPIVLMTDGQ 248
>UNIPROTKB|Q8ECD1 [details] [associations]
symbol:flhF "Flagellar polar localization control system
flagellar assembly determinant GTPase FlhF" species:211586
"Shewanella oneidensis MR-1" [GO:0001539 "ciliary or flagellar
motility" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0009296 "flagellum assembly" evidence=ISS]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR020006
Pfam:PF00448 SMART:SM00382 SMART:SM00962 GO:GO:0005525
GO:GO:0005886 GO:GO:0019861 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0017111 GO:GO:0009296 GO:GO:0001539 GO:GO:0006614 KO:K02404
HOGENOM:HOG000254735 ProtClustDB:PRK05703 TIGRFAMs:TIGR03499
OMA:EPRQAWR RefSeq:NP_718767.1 ProteinModelPortal:Q8ECD1
GeneID:1170905 KEGG:son:SO_3212 PATRIC:23526108 Uniprot:Q8ECD1
Length = 458
Score = 190 (71.9 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 70/216 (32%), Positives = 104/216 (48%)
Query: 156 QLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA-NYLKKQGKSC 214
+LV+ + L ++ + ++V + V+ L G GVGKTT AKLA + G
Sbjct: 217 ELVRALPQSLANMLDNQGDDIV---KQGGVVALVGPTGVGKTTSLAKLAARFAAHHGADQ 273
Query: 215 M-LVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDT 273
+ L+ D YR A +QL G+ +G PV A + QI Q +N +V++DT
Sbjct: 274 VALITTDHYRIGAYEQLATYGKIMGCPVKQAHDLAELEQILYQF------RNRKLVLIDT 327
Query: 274 AGRLQIDKAMMDELKDVKRVLN-PTEVLLVVDAMTGQEAAA--LVTTFNIEIGITGAILT 330
AG Q D + +L ++ P LV+ A TGQ V F I ++G +LT
Sbjct: 328 AGMGQRDMRLYQQLDNLTANSRIPIRSYLVLSA-TGQRRVLQDAVNHFK-RIPLSGVVLT 385
Query: 331 KLDGDSRGGAALSVKEVSGKPIKLVGRGERM-EDLE 365
KLD ALSV SG P+ V G+R+ ED++
Sbjct: 386 KLDESVSLAGALSVLIQSGLPLSYVTDGQRVPEDMK 421
>TIGR_CMR|SO_3212 [details] [associations]
symbol:SO_3212 "flagellar biosynthetic protein FlhF"
species:211586 "Shewanella oneidensis MR-1" [GO:0001539 "ciliary or
flagellar motility" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0009296 "flagellum assembly" evidence=ISS]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR020006
Pfam:PF00448 SMART:SM00382 SMART:SM00962 GO:GO:0005525
GO:GO:0005886 GO:GO:0019861 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0017111 GO:GO:0009296 GO:GO:0001539 GO:GO:0006614 KO:K02404
HOGENOM:HOG000254735 ProtClustDB:PRK05703 TIGRFAMs:TIGR03499
OMA:EPRQAWR RefSeq:NP_718767.1 ProteinModelPortal:Q8ECD1
GeneID:1170905 KEGG:son:SO_3212 PATRIC:23526108 Uniprot:Q8ECD1
Length = 458
Score = 190 (71.9 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 70/216 (32%), Positives = 104/216 (48%)
Query: 156 QLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLA-NYLKKQGKSC 214
+LV+ + L ++ + ++V + V+ L G GVGKTT AKLA + G
Sbjct: 217 ELVRALPQSLANMLDNQGDDIV---KQGGVVALVGPTGVGKTTSLAKLAARFAAHHGADQ 273
Query: 215 M-LVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDT 273
+ L+ D YR A +QL G+ +G PV A + QI Q +N +V++DT
Sbjct: 274 VALITTDHYRIGAYEQLATYGKIMGCPVKQAHDLAELEQILYQF------RNRKLVLIDT 327
Query: 274 AGRLQIDKAMMDELKDVKRVLN-PTEVLLVVDAMTGQEAAA--LVTTFNIEIGITGAILT 330
AG Q D + +L ++ P LV+ A TGQ V F I ++G +LT
Sbjct: 328 AGMGQRDMRLYQQLDNLTANSRIPIRSYLVLSA-TGQRRVLQDAVNHFK-RIPLSGVVLT 385
Query: 331 KLDGDSRGGAALSVKEVSGKPIKLVGRGERM-EDLE 365
KLD ALSV SG P+ V G+R+ ED++
Sbjct: 386 KLDESVSLAGALSVLIQSGLPLSYVTDGQRVPEDMK 421
>SGD|S000002700 [details] [associations]
symbol:SRP101 "Signal recognition particle (SRP) receptor
alpha subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005525
"GTP binding" evidence=IEA;IPI] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA;IC;TAS]
[GO:0005047 "signal recognition particle binding" evidence=ISS;IMP]
[GO:0005785 "signal recognition particle receptor complex"
evidence=TAS] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA;IDA] [GO:0045047 "protein targeting to ER"
evidence=IMP] [GO:0006810 "transport" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SGD:S000002700 GO:GO:0005525
EMBL:BK006938 GO:GO:0017111 SUPFAM:SSF64356 EMBL:U51031
eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364 RefSeq:NP_010578.3
GeneID:851886 KEGG:sce:YDR292C KO:K13431 RefSeq:NP_010582.3
GeneID:851890 KEGG:sce:YDR296W GO:GO:0005785 TCDB:3.A.5.8.1
GO:GO:0005047 PDB:1NRJ PDBsum:1NRJ HOGENOM:HOG000201671
GeneTree:ENSGT00550000074936 OrthoDB:EOG42Z7ZQ EMBL:M77274
PIR:S70121 ProteinModelPortal:P32916 SMR:P32916 DIP:DIP-1672N
IntAct:P32916 MINT:MINT-364995 STRING:P32916 PaxDb:P32916
PeptideAtlas:P32916 EnsemblFungi:YDR292C CYGD:YDR292c OMA:HVENLAQ
EvolutionaryTrace:P32916 NextBio:969862 Genevestigator:P32916
GermOnline:YDR292C InterPro:IPR015284 Pfam:PF09201 Uniprot:P32916
Length = 621
Score = 142 (55.0 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 36/120 (30%), Positives = 64/120 (53%)
Query: 251 SQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQE 310
++IAKQ ++ ++ +N D+V++DTAGR D +M LK P ++++V +A+ G +
Sbjct: 489 TKIAKQAIKYSRDQNFDIVLMDTAGRRHNDPTLMSPLKSFADQAKPDKIIMVGEALVGTD 548
Query: 311 AAALVTTFNIEIG----ITGAILTKLD--GDSRGGAALSVKEVSGKPIKLVGRGERMEDL 364
+ FN G + I++K D G+ G +++ +G PI VG G+ DL
Sbjct: 549 SVQQAKNFNDAFGKGRNLDFFIISKCDTVGEMLG-TMVNMVYATGIPILFVGVGQTYTDL 607
Score = 93 (37.8 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 33/143 (23%), Positives = 64/143 (44%)
Query: 101 GEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKI 160
G +T+ + ++ + + + L+ +V+ Q VS VG + +
Sbjct: 302 GNKTINESDLKSVLEKLTQQLITKNVAPEAADYLTQQVSHDLVGSKTANWTSVENTARES 361
Query: 161 VRDELVKLMGGEVS-----ELVFAKSR--------PTVILLAGLQGVGKTTVSAKLANYL 207
+ L +++ VS E+ +S+ P V + G+ GVGK+T +KLA +L
Sbjct: 362 LTKALTQILTPGVSVDLLREIQSKRSKKDEEGKCDPYVFSIVGVNGVGKSTNLSKLAFWL 421
Query: 208 KKQGKSCMLVAGDVYRPAAIDQL 230
+ ++VA D +R A++QL
Sbjct: 422 LQNNFKVLIVACDTFRSGAVEQL 444
>UNIPROTKB|F1MNJ2 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9913 "Bos taurus" [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0005785 "signal recognition particle receptor complex"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005047
"signal recognition particle binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0003924 SUPFAM:SSF64356 GO:GO:0006614 SUPFAM:SSF47364
GO:GO:0005785 GO:GO:0005047 IPI:IPI00695733
GeneTree:ENSGT00550000074936 OMA:KEGSDGP EMBL:DAAA02063109
Ensembl:ENSBTAT00000018762 Uniprot:F1MNJ2
Length = 598
Score = 183 (69.5 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 66/222 (29%), Positives = 109/222 (49%)
Query: 135 VQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGV 194
V + +QA+ L++ ++P Q+ V ++RD +M + + RP V+ G+ GV
Sbjct: 382 VTSTVKQALQESLVQILQP-QRRVDMLRD----IMDAQRHQ------RPYVVTFCGVNGV 430
Query: 195 GKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQL-------VIL------GEQVGVPV 241
GK+T AK++ +L + G S ++ A D +R A++QL L G + V +
Sbjct: 431 GKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQL 490
Query: 242 YTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLL 301
+ G + IA + + A+ + DVV+VDTAGR+Q + +M L + V P VL
Sbjct: 491 FEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLF 550
Query: 302 VVDAMTGQEAAALVTTFNIEIG----------ITGAILTKLD 333
V +A+ G EA + FN + I G +LTK D
Sbjct: 551 VGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFD 592
Score = 122 (48.0 bits), Expect = 0.00033, P = 0.00033
Identities = 35/141 (24%), Positives = 78/141 (55%)
Query: 99 LKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVG--VGLIRGVRPDQQ 156
L G ++LT+E++ + +R L+ +V+ + + ++V+ + G +G V
Sbjct: 328 LVGSKSLTREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVT--ST 385
Query: 157 LVKIVRDELVKLMGGE-----VSELVFAK--SRPTVILLAGLQGVGKTTVSAKLANYLKK 209
+ + +++ LV+++ + + +++ A+ RP V+ G+ GVGK+T AK++ +L +
Sbjct: 386 VKQALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLE 445
Query: 210 QGKSCMLVAGDVYRPAAIDQL 230
G S ++ A D +R A++QL
Sbjct: 446 NGFSVLIAACDTFRAGAVEQL 466
>UNIPROTKB|Q722L6 [details] [associations]
symbol:LMOf2365_0717 "Putative flagellar biosynthesis
protein FlhF" species:265669 "Listeria monocytogenes serotype 4b
str. F2365" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000897 InterPro:IPR020006 Pfam:PF00448 GO:GO:0005525
GO:GO:0005886 GO:GO:0019861 EMBL:AE017262 GenomeReviews:AE017262_GR
GO:GO:0043064 GO:GO:0006614 eggNOG:COG1419 KO:K02404
TIGRFAMs:TIGR03499 RefSeq:YP_013321.1 ProteinModelPortal:Q722L6
STRING:Q722L6 GeneID:2797398 KEGG:lmf:LMOf2365_0717 PATRIC:20322642
HOGENOM:HOG000254016 OMA:QFHGKKK ProtClustDB:PRK12726
Uniprot:Q722L6
Length = 407
Score = 175 (66.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 59/224 (26%), Positives = 109/224 (48%)
Query: 161 VRDELVKLMGGEVS-ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAG 219
+ D V + G+++ E F S +I L G GVGKTT KL L KQ ++ +
Sbjct: 183 ITDWFVPYLSGKLAVEDSFDLSNHRIISLIGQTGVGKTTTLVKLGWQLLKQNRTVGFITT 242
Query: 220 DVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKN-VDVVIVDTAGRLQ 278
D +R A++Q +++ V + A P+++ ++ ++ N VD +++DT GR
Sbjct: 243 DTFRSGAVEQFQGYADKLDVELIVA---TSPAEL-EEAVQYMTYVNCVDHILIDTVGRNY 298
Query: 279 IDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFN--IEIGITGAILTKLDGDS 336
+ + + E+ V++P L +G ++A ++T EI I G I+TK+D +
Sbjct: 299 LAEESVSEISAYTDVVHPD--LTCFTFSSGMKSADVMTILPKLAEIPIDGFIITKMDETT 356
Query: 337 RGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDR--MAGRILG 378
R G +V + + P+ + G+ + + F P +A R +G
Sbjct: 357 RIGDLYTVMQETNLPVLYMTDGQNITE-NIFRPKSRWLAERFVG 399
>TIGR_CMR|CHY_1010 [details] [associations]
symbol:CHY_1010 "flagellar biosynthesis protein FlhF"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0001539 "ciliary or flagellar motility" evidence=ISS]
[GO:0005198 "structural molecule activity" evidence=ISS]
[GO:0009426 "bacterial-type flagellum basal body, distal rod"
evidence=ISS] InterPro:IPR000897 InterPro:IPR003593 Pfam:PF00448
SMART:SM00382 SMART:SM00962 GO:GO:0005525 GO:GO:0019861
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0017111 GO:GO:0006614
eggNOG:COG1419 KO:K02404 RefSeq:YP_359857.1
ProteinModelPortal:Q3ADC7 STRING:Q3ADC7 GeneID:3728496
KEGG:chy:CHY_1010 PATRIC:21275153 HOGENOM:HOG000254735 OMA:IVESIRI
ProtClustDB:PRK05703 BioCyc:CHYD246194:GJCN-1009-MONOMER
Uniprot:Q3ADC7
Length = 350
Score = 166 (63.5 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 51/178 (28%), Positives = 84/178 (47%)
Query: 188 LAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGT 246
L G GVGKTT AK+A L + K + D +R A++QL I G+ +G V AG+
Sbjct: 161 LIGPTGVGKTTTLAKIAGRLAIHEEKPIRFITLDTFRVGAVEQLKIYGKYLGTTVKVAGS 220
Query: 247 EVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKD-VKRVLNPTEVLLVVDA 305
P ++ + K+ + + +DTAGR + + EL ++ V ++ LV+ A
Sbjct: 221 ---PMELWRA---VQKQNEGETIFIDTAGRPSKKQNQIQELAGFLEAVKKEKDIYLVISA 274
Query: 306 MTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMED 363
E A + G I+TK+D + G +++ KPI +G G+ + D
Sbjct: 275 TVKPEDAEKIAKDFSPCGFNKFIVTKIDETDKFGVLINLIVKFKKPIVYLGVGQNVPD 332
>UNIPROTKB|Q9KQD2 [details] [associations]
symbol:VC_2068 "Flagellar biosynthetic protein FlhF,
putative" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0001539 "ciliary or flagellar motility" evidence=ISS]
[GO:0009296 "flagellum assembly" evidence=ISS] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR020006 Pfam:PF00448 SMART:SM00382
SMART:SM00962 GO:GO:0005525 GO:GO:0005886 GO:GO:0019861
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0017111 GO:GO:0009296
GO:GO:0001539 GO:GO:0006614 HSSP:P83749 KO:K02404
ProtClustDB:PRK05703 TIGRFAMs:TIGR03499 PIR:F82123
RefSeq:NP_231700.1 ProteinModelPortal:Q9KQD2 DNASU:2613448
GeneID:2613448 KEGG:vch:VC2068 PATRIC:20083171 OMA:LCARIHG
Uniprot:Q9KQD2
Length = 495
Score = 166 (63.5 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 63/199 (31%), Positives = 93/199 (46%)
Query: 182 RPTVILLAGLQGVGKTTVSAKLA-NYLKKQGK-SCMLVAGDVYRPAAIDQLVILGEQVGV 239
R V+ L G GVGKTT AKLA + G + LV D YR A +QL I G +G
Sbjct: 281 RGGVVALLGPTGVGKTTTVAKLAARAAMEYGSDNVALVTTDTYRIGAHEQLSIYGRIMGC 340
Query: 240 PVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPT-E 298
PV A + + + Q +N +++VDTAG Q D + ++L + + T
Sbjct: 341 PVRVAKDSNELADVIYQ------LRNRRLILVDTAGMGQRDVRLSEQLDTLMQESGETIH 394
Query: 299 VLLVVDAMTGQEAAALVTTFNIE-IGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGR 357
LV+ A T Q T + I ++G I+TKLD G +SV + P+ +
Sbjct: 395 SYLVLPA-TAQRKVLQETIEHFRRIPLSGCIMTKLDECLSLGEFVSVVVQNALPVAYIAN 453
Query: 358 GERM-EDLEPFYPDRMAGR 375
G+R+ ED+ P M +
Sbjct: 454 GQRVPEDIVIAQPKYMVAK 472
>TIGR_CMR|VC_2068 [details] [associations]
symbol:VC_2068 "flagellar biosynthetic protein FlhF,
putative" species:686 "Vibrio cholerae O1 biovar El Tor"
[GO:0001539 "ciliary or flagellar motility" evidence=ISS]
[GO:0009296 "flagellum assembly" evidence=ISS] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR020006 Pfam:PF00448 SMART:SM00382
SMART:SM00962 GO:GO:0005525 GO:GO:0005886 GO:GO:0019861
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0017111 GO:GO:0009296
GO:GO:0001539 GO:GO:0006614 HSSP:P83749 KO:K02404
ProtClustDB:PRK05703 TIGRFAMs:TIGR03499 PIR:F82123
RefSeq:NP_231700.1 ProteinModelPortal:Q9KQD2 DNASU:2613448
GeneID:2613448 KEGG:vch:VC2068 PATRIC:20083171 OMA:LCARIHG
Uniprot:Q9KQD2
Length = 495
Score = 166 (63.5 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 63/199 (31%), Positives = 93/199 (46%)
Query: 182 RPTVILLAGLQGVGKTTVSAKLA-NYLKKQGK-SCMLVAGDVYRPAAIDQLVILGEQVGV 239
R V+ L G GVGKTT AKLA + G + LV D YR A +QL I G +G
Sbjct: 281 RGGVVALLGPTGVGKTTTVAKLAARAAMEYGSDNVALVTTDTYRIGAHEQLSIYGRIMGC 340
Query: 240 PVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPT-E 298
PV A + + + Q +N +++VDTAG Q D + ++L + + T
Sbjct: 341 PVRVAKDSNELADVIYQ------LRNRRLILVDTAGMGQRDVRLSEQLDTLMQESGETIH 394
Query: 299 VLLVVDAMTGQEAAALVTTFNIE-IGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGR 357
LV+ A T Q T + I ++G I+TKLD G +SV + P+ +
Sbjct: 395 SYLVLPA-TAQRKVLQETIEHFRRIPLSGCIMTKLDECLSLGEFVSVVVQNALPVAYIAN 453
Query: 358 GERM-EDLEPFYPDRMAGR 375
G+R+ ED+ P M +
Sbjct: 454 GQRVPEDIVIAQPKYMVAK 472
>TIGR_CMR|CJE_0061 [details] [associations]
symbol:CJE_0061 "flagellar biosynthetic protein FlhF"
species:195099 "Campylobacter jejuni RM1221" [GO:0001539 "ciliary
or flagellar motility" evidence=ISS] [GO:0005525 "GTP binding"
evidence=ISS] [GO:0009296 "flagellum assembly" evidence=ISS]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR020006
Pfam:PF00448 SMART:SM00382 SMART:SM00962 GO:GO:0005525
GO:GO:0005886 GO:GO:0019861 EMBL:CP000025 GenomeReviews:CP000025_GR
GO:GO:0017111 GO:GO:0043064 GO:GO:0006614 eggNOG:COG1419 KO:K02404
HOGENOM:HOG000254735 ProtClustDB:PRK05703 TIGRFAMs:TIGR03499
RefSeq:YP_178086.1 ProteinModelPortal:Q5HX99 STRING:Q5HX99
GeneID:3230824 KEGG:cjr:CJE0061 PATRIC:20041827 OMA:KVATNEY
BioCyc:CJEJ195099:GJC0-65-MONOMER Uniprot:Q5HX99
Length = 484
Score = 161 (61.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 61/201 (30%), Positives = 98/201 (48%)
Query: 185 VILLAGLQGVGKTTVSAKLA---NYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPV 241
+++L G GVGKTT AKLA Y K+ K+ ++ D YR A++QL + + +P+
Sbjct: 284 IMMLVGPTGVGKTTTLAKLAFRYAYGDKRYKTGIITL-DTYRIGAVEQLFQYAKMMKLPI 342
Query: 242 YTAGTEVKPSQIAKQGLEEAKKK--NVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPT-E 298
+ ++P L+EA K N +V++VDT G Q D++ + + K+ N +
Sbjct: 343 IDS---IEPKD-----LDEAIKSLNNCEVILVDTIGNSQYDQSKLAKTKEFLMHSNAEID 394
Query: 299 VLLVVDAMTGQE-AAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGR 357
V LVV A T QE + F+ + I I+TK D G S+ + P+
Sbjct: 395 VNLVVSANTKQEDLMEIYKNFSF-LNIDTLIITKFDETKVFGNIFSLVYETNIPLSFFSI 453
Query: 358 GERM-EDLEPFYPDRMAGRIL 377
G+ + +DLE D + IL
Sbjct: 454 GQEVPDDLEVANSDFLVHCIL 474
>UNIPROTKB|Q485K6 [details] [associations]
symbol:flhF "Flagellar biosynthetic protein FlhF"
species:167879 "Colwellia psychrerythraea 34H" [GO:0001539 "ciliary
or flagellar motility" evidence=ISS] [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0006184 "GTP catabolic process" evidence=ISS]
[GO:0009296 "flagellum assembly" evidence=ISS] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR020006 Pfam:PF00448 SMART:SM00382
SMART:SM00962 GO:GO:0005525 GO:GO:0005886 GO:GO:0019861
GO:GO:0003924 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0009296
GO:GO:0001539 GO:GO:0006614 eggNOG:COG1419 KO:K02404
HOGENOM:HOG000254735 ProtClustDB:PRK05703 TIGRFAMs:TIGR03499
RefSeq:YP_268259.1 ProteinModelPortal:Q485K6 STRING:Q485K6
GeneID:3520893 KEGG:cps:CPS_1517 PATRIC:21466241 OMA:EPRQAWR
BioCyc:CPSY167879:GI48-1598-MONOMER Uniprot:Q485K6
Length = 513
Score = 161 (61.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 60/190 (31%), Positives = 93/190 (48%)
Query: 181 SRPTVILLAGLQGVGKTTVSAKLA-NYLKKQGKSCM-LVAGDVYRPAAIDQLVILGEQVG 238
+R V+ L G GVGKTT AKLA + + G + L++ D +R A +QL G+ +G
Sbjct: 294 NRGGVVALVGPTGVGKTTTIAKLAAGFSQVHGSDQVALISTDTFRIAGFEQLATYGKIIG 353
Query: 239 VPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKD-VKRVLNPT 297
V A K SQ L++ KK + +++DTAG Q D + ++L V
Sbjct: 354 CQVSLA----KDSQALDILLQQYSKKKL--ILIDTAGMGQRDMRLAEQLTALVSNARVRI 407
Query: 298 EVLLVVDAMTGQEAAAL-VTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVG 356
LV+ A T Q V F ++ ++G I TKLD G ++ +G PI +
Sbjct: 408 RNYLVLAANTQQGVMQENVDRFK-KVPLSGCIYTKLDESISIGEIITTSIQNGLPIGYLT 466
Query: 357 RGERM-EDLE 365
G+R+ ED++
Sbjct: 467 DGQRVPEDIK 476
>TIGR_CMR|CPS_1517 [details] [associations]
symbol:CPS_1517 "flagellar biosynthetic protein FlhF"
species:167879 "Colwellia psychrerythraea 34H" [GO:0001539 "ciliary
or flagellar motility" evidence=ISS] [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0009296 "flagellum assembly" evidence=ISS]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR020006
Pfam:PF00448 SMART:SM00382 SMART:SM00962 GO:GO:0005525
GO:GO:0005886 GO:GO:0019861 GO:GO:0003924 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0009296 GO:GO:0001539 GO:GO:0006614
eggNOG:COG1419 KO:K02404 HOGENOM:HOG000254735 ProtClustDB:PRK05703
TIGRFAMs:TIGR03499 RefSeq:YP_268259.1 ProteinModelPortal:Q485K6
STRING:Q485K6 GeneID:3520893 KEGG:cps:CPS_1517 PATRIC:21466241
OMA:EPRQAWR BioCyc:CPSY167879:GI48-1598-MONOMER Uniprot:Q485K6
Length = 513
Score = 161 (61.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 60/190 (31%), Positives = 93/190 (48%)
Query: 181 SRPTVILLAGLQGVGKTTVSAKLA-NYLKKQGKSCM-LVAGDVYRPAAIDQLVILGEQVG 238
+R V+ L G GVGKTT AKLA + + G + L++ D +R A +QL G+ +G
Sbjct: 294 NRGGVVALVGPTGVGKTTTIAKLAAGFSQVHGSDQVALISTDTFRIAGFEQLATYGKIIG 353
Query: 239 VPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKD-VKRVLNPT 297
V A K SQ L++ KK + +++DTAG Q D + ++L V
Sbjct: 354 CQVSLA----KDSQALDILLQQYSKKKL--ILIDTAGMGQRDMRLAEQLTALVSNARVRI 407
Query: 298 EVLLVVDAMTGQEAAAL-VTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVG 356
LV+ A T Q V F ++ ++G I TKLD G ++ +G PI +
Sbjct: 408 RNYLVLAANTQQGVMQENVDRFK-KVPLSGCIYTKLDESISIGEIITTSIQNGLPIGYLT 466
Query: 357 RGERM-EDLE 365
G+R+ ED++
Sbjct: 467 DGQRVPEDIK 476
>TAIR|locus:2158103 [details] [associations]
symbol:AT5G66970 species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005786 "signal recognition particle, endoplasmic
reticulum targeting" evidence=ISS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0051607 "defense response to
virus" evidence=RCA] InterPro:IPR000897 InterPro:IPR013822
Pfam:PF00448 GO:GO:0005525 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0006614 SUPFAM:SSF47364 eggNOG:COG0541 KO:K03106
EMBL:DQ447113 IPI:IPI00530911 RefSeq:NP_201498.2 UniGene:At.55720
ProteinModelPortal:Q1PDF5 SMR:Q1PDF5 STRING:Q1PDF5
EnsemblPlants:AT5G66970.1 GeneID:836831 KEGG:ath:AT5G66970
TAIR:At5g66970 HOGENOM:HOG000124785 InParanoid:Q1PDF5 OMA:YARYHRK
PhylomeDB:Q1PDF5 ProtClustDB:CLSN2702272 ArrayExpress:Q1PDF5
Genevestigator:Q1PDF5 Uniprot:Q1PDF5
Length = 175
Score = 112 (44.5 bits), Expect = 0.00021, P = 0.00021
Identities = 39/133 (29%), Positives = 65/133 (48%)
Query: 114 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGV-GLIRGVRPDQQLVKIVR-DELVKLMGG 171
+ +I ALL+AD+ P R V + +++ + L + + L+ ++ EL +
Sbjct: 32 LNEITCALLDADI--P--RLAVDEIETKSLEIINLPKAPKKKGALIYMMMLQELSSKLDP 87
Query: 172 EVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLV 231
S L+ K P++++ GL+GV KT AK A Y +K+G LV D ++ D V
Sbjct: 88 GKSALIRGKLEPSIVMFIGLRGVDKTKTCAKYARYHRKKGFRPALVCADTFK---FDAFV 144
Query: 232 ILGEQVG--VPVY 242
L + VPVY
Sbjct: 145 RLNKAAKDEVPVY 157
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.356 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 481 461 0.00096 118 3 11 22 0.41 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 91
No. of states in DFA: 604 (64 KB)
Total size of DFA: 208 KB (2116 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 39.76u 0.14s 39.90t Elapsed: 00:00:02
Total cpu time: 39.78u 0.14s 39.92t Elapsed: 00:00:02
Start: Sat May 11 02:31:48 2013 End: Sat May 11 02:31:50 2013