BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011627
(481 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 303 bits (775), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 150/305 (49%), Positives = 206/305 (67%), Gaps = 15/305 (4%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIV-TSPGP 65
+VF AR KTG+ VALKK+ M+NEKEGFPITA+REIKIL+ L+HENV+ L EI T P
Sbjct: 33 EVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASP 92
Query: 66 ERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHV 125
N+ +GS Y+VF++ +HDL GL ++FT+ +IK M+ LL GL+Y H
Sbjct: 93 Y---------NRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR 143
Query: 126 NQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN---NTLTNRVITLWYRPPELLLG 182
N++LHRD+K +N+LI +G LKLADFGLAR+FS N N NRV+TLWYRPPELLLG
Sbjct: 144 NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLG 203
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY 242
YGP +D+W GCI AE+ PI+ G E QL+ I +LCGS +WP V Y
Sbjct: 204 ERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELY 263
Query: 243 NHFKPSRTMKRRVREVFRHFDR--HALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPC 300
+ + KR+V++ + + R +AL+L++K+L+LDP+QRI + DAL+ ++FW+DP+P
Sbjct: 264 EKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPS 323
Query: 301 DPKSL 305
D K +
Sbjct: 324 DLKGM 328
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 301 bits (772), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 150/305 (49%), Positives = 206/305 (67%), Gaps = 15/305 (4%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIV-TSPGP 65
+VF AR KTG+ VALKK+ M+NEKEGFPITA+REIKIL+ L+HENV+ L EI T P
Sbjct: 33 EVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASP 92
Query: 66 ERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHV 125
N+ +GS Y+VF++ +HDL GL ++FT+ +IK M+ LL GL+Y H
Sbjct: 93 Y---------NRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR 143
Query: 126 NQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN---NTLTNRVITLWYRPPELLLG 182
N++LHRD+K +N+LI +G LKLADFGLAR+FS N N NRV+TLWYRPPELLLG
Sbjct: 144 NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLG 203
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY 242
YGP +D+W GCI AE+ PI+ G E QL+ I +LCGS +WP V Y
Sbjct: 204 ERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELY 263
Query: 243 NHFKPSRTMKRRVREVFRHFDR--HALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPC 300
+ + KR+V++ + + R +AL+L++K+L+LDP+QRI + DAL+ ++FW+DP+P
Sbjct: 264 EKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPS 323
Query: 301 DPKSL 305
D K +
Sbjct: 324 DLKGM 328
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 301 bits (772), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 150/305 (49%), Positives = 206/305 (67%), Gaps = 15/305 (4%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIV-TSPGP 65
+VF AR KTG+ VALKK+ M+NEKEGFPITA+REIKIL+ L+HENV+ L EI T P
Sbjct: 32 EVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASP 91
Query: 66 ERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHV 125
N+ +GS Y+VF++ +HDL GL ++FT+ +IK M+ LL GL+Y H
Sbjct: 92 Y---------NRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR 142
Query: 126 NQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN---NTLTNRVITLWYRPPELLLG 182
N++LHRD+K +N+LI +G LKLADFGLAR+FS N N NRV+TLWYRPPELLLG
Sbjct: 143 NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLG 202
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY 242
YGP +D+W GCI AE+ PI+ G E QL+ I +LCGS +WP V Y
Sbjct: 203 ERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELY 262
Query: 243 NHFKPSRTMKRRVREVFRHFDR--HALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPC 300
+ + KR+V++ + + R +AL+L++K+L+LDP+QRI + DAL+ ++FW+DP+P
Sbjct: 263 EKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPS 322
Query: 301 DPKSL 305
D K +
Sbjct: 323 DLKGM 327
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 300 bits (767), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 149/305 (48%), Positives = 205/305 (67%), Gaps = 15/305 (4%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIV-TSPGP 65
+VF AR KTG+ VALKK+ M+NEKEGFPITA+REIKIL+ L+HENV+ L EI T P
Sbjct: 33 EVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASP 92
Query: 66 ERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHV 125
N+ + S Y+VF++ +HDL GL ++FT+ +IK M+ LL GL+Y H
Sbjct: 93 Y---------NRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR 143
Query: 126 NQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN---NTLTNRVITLWYRPPELLLG 182
N++LHRD+K +N+LI +G LKLADFGLAR+FS N N NRV+TLWYRPPELLLG
Sbjct: 144 NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLG 203
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY 242
YGP +D+W GCI AE+ PI+ G E QL+ I +LCGS +WP V Y
Sbjct: 204 ERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELY 263
Query: 243 NHFKPSRTMKRRVREVFRHFDR--HALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPC 300
+ + KR+V++ + + R +AL+L++K+L+LDP+QRI + DAL+ ++FW+DP+P
Sbjct: 264 EKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPS 323
Query: 301 DPKSL 305
D K +
Sbjct: 324 DLKGM 328
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 253 bits (647), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 137/297 (46%), Positives = 184/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 26 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 80
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 81 -----------ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T T+ V+TLWYR PE+LLG Y
Sbjct: 130 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVVTLWYRAPEILLGXKYY 188
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 189 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 245
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 246 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 302
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/297 (46%), Positives = 184/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 26 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 80
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 81 -----------ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T T+ V+TLWYR PE+LLG Y
Sbjct: 130 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVVTLWYRAPEILLGCKYY 188
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 189 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 245
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 246 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 302
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/297 (46%), Positives = 184/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 19 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 73
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 74 -----------ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH 122
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T T+ V+TLWYR PE+LLG Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 238
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/297 (46%), Positives = 184/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 19 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 73
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 74 -----------ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T T+ V+TLWYR PE+LLG Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 238
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/297 (46%), Positives = 184/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 18 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 72
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 73 -----------ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T T+ V+TLWYR PE+LLG Y
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 237
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 294
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/297 (46%), Positives = 184/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 20 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 74
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 75 -----------ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T T+ V+TLWYR PE+LLG Y
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVVTLWYRAPEILLGCKYY 182
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 239
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 296
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/297 (46%), Positives = 184/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 19 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 73
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 74 -----------ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T T+ V+TLWYR PE+LLG Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 238
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/297 (46%), Positives = 184/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 19 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 73
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 74 -----------ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T T+ V+TLWYR PE+LLG Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVVTLWYRAPEILLGXKYY 181
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 238
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/297 (46%), Positives = 184/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 23 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 77
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 78 -----------ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T T+ V+TLWYR PE+LLG Y
Sbjct: 127 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVVTLWYRAPEILLGCKYY 185
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 186 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 242
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 243 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 299
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/297 (46%), Positives = 184/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 18 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 72
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 73 -----------ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T T+ V+TLWYR PE+LLG Y
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 237
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 294
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/297 (46%), Positives = 184/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 22 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 76
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++D DL D L +P IK Y+ QLL GL +CH +
Sbjct: 77 -----------ENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T + V+TLWYR PE+LLG Y
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 241
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 298
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 251 bits (642), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 137/297 (46%), Positives = 184/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 18 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 72
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 73 -----------ENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T T+ V+TLWYR PE+LLG Y
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 237
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 294
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 251 bits (641), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 136/297 (45%), Positives = 183/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 22 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 76
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 77 -----------ENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T + V+TLWYR PE+LLG Y
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 241
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 298
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 251 bits (640), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 136/297 (45%), Positives = 183/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 20 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 74
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 75 -----------ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T + V+TLWYR PE+LLG Y
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 239
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 296
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 251 bits (640), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 136/297 (45%), Positives = 183/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 21 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 75
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 76 -----------ENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T + V+TLWYR PE+LLG Y
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 240
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 297
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 251 bits (640), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 136/297 (45%), Positives = 183/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 21 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 75
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 76 -----------ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T + V+TLWYR PE+LLG Y
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 240
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 297
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 251 bits (640), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 136/297 (45%), Positives = 183/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 22 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 76
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 77 -----------ENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T + V+TLWYR PE+LLG Y
Sbjct: 126 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 241
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 298
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 251 bits (640), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 136/297 (45%), Positives = 183/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 22 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 76
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 77 -----------ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T + V+TLWYR PE+LLG Y
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 241
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 298
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 251 bits (640), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 136/297 (45%), Positives = 183/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 20 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 74
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 75 -----------ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T + V+TLWYR PE+LLG Y
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 239
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 296
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 251 bits (640), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 136/297 (45%), Positives = 183/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 19 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 73
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 74 -----------ENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T + V+TLWYR PE+LLG Y
Sbjct: 123 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 238
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 251 bits (640), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 136/297 (45%), Positives = 183/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VAL KIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 19 VYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 73
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 74 -----------ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T T+ V+TLWYR PE+LLG Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 238
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 251 bits (640), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 136/297 (45%), Positives = 183/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VAL KIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 18 VYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 72
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 73 -----------ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T T+ V+TLWYR PE+LLG Y
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 237
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 294
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 251 bits (640), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 136/297 (45%), Positives = 183/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 19 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 73
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 74 -----------ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T + V+TLWYR PE+LLG Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 238
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 251 bits (640), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 136/297 (45%), Positives = 183/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 23 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 77
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 78 -----------ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T + V+TLWYR PE+LLG Y
Sbjct: 127 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWYRAPEILLGCKYY 185
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 186 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 242
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 243 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 299
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 251 bits (640), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 136/297 (45%), Positives = 183/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 20 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 74
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 75 -----------ENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T + V+TLWYR PE+LLG Y
Sbjct: 124 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 239
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 296
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 251 bits (640), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 136/297 (45%), Positives = 183/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 18 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 72
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 73 -----------ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T + V+TLWYR PE+LLG Y
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWYRAPEILLGCKYY 180
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 237
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 294
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 251 bits (640), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 136/297 (45%), Positives = 183/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 22 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 76
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 77 -----------ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T + V+TLWYR PE+LLG Y
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 241
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 298
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 251 bits (640), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 136/297 (45%), Positives = 183/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 21 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 75
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 76 -----------ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T + V+TLWYR PE+LLG Y
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 240
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 297
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 251 bits (640), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 136/297 (45%), Positives = 183/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 21 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 75
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 76 -----------ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T + V+TLWYR PE+LLG Y
Sbjct: 125 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 240
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 297
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 251 bits (640), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 136/297 (45%), Positives = 183/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 18 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 72
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 73 -----------ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T + V+TLWYR PE+LLG Y
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWYRAPEILLGCKYY 180
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 237
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 294
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 251 bits (640), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 136/297 (45%), Positives = 183/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 22 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 76
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 77 -----------ENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T + V+TLWYR PE+LLG Y
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 241
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 298
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 251 bits (640), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 136/297 (45%), Positives = 183/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 19 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 73
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 74 -----------ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T + V+TLWYR PE+LLG Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 238
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 250 bits (639), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 136/297 (45%), Positives = 183/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 20 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 74
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 75 -----------ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T + V+TLWYR PE+LLG Y
Sbjct: 124 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 239
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 296
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 250 bits (639), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 136/297 (45%), Positives = 183/297 (61%), Gaps = 25/297 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 19 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 73
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 74 -----------ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T + V+TLWYR PE+LLG Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 238
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLP 299
PS + ++ +V D LL +ML DP++RISAK AL +F T P+P
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 249 bits (636), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 133/289 (46%), Positives = 179/289 (61%), Gaps = 23/289 (7%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ AR TGE+VALKKIR+D E EG P TAIREI +LK+L H N++KL +++ +
Sbjct: 19 VYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----- 73
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVN 126
Y+VFE++ DL D L +P IK Y+ QLL GL +CH +
Sbjct: 74 -----------ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+VLHRD+K NLLI+ EG +KLADFGLAR+F T + V+TLWYR PE+LLG Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
AVD+WS+GCIFAE++ + + PG +E +QL +IF G+PDE +WPGV+ MP Y K
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---K 238
Query: 247 PS--RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
PS + ++ +V D LL +ML DP++RISAK AL +F
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 240 bits (612), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 123/279 (44%), Positives = 175/279 (62%), Gaps = 22/279 (7%)
Query: 17 GEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGN 76
GE ALKKIR++ E EG P T IREI ILK+L+H N++KL +++ +
Sbjct: 26 GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT-------------- 71
Query: 77 KYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGS 136
+ +VFE++D DL L D K ++ QLL G+ YCH +VLHRD+K
Sbjct: 72 --KKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQ 129
Query: 137 NLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG 196
NLLI+ EG LK+ADFGLAR+F T+ V+TLWYR P++L+G+ KY +D+WSVG
Sbjct: 130 NLLINREGELKIADFGLARAFGIPVRK-YTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVG 188
Query: 197 CIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRV- 255
CIFAE++NG P+ PG +EA+QL +IF + G+P+ WP V+++P Y+ P+ T+ +
Sbjct: 189 CIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD---PNFTVYEPLP 245
Query: 256 -REVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
+ D ++LL KML LDP+QRI+AK AL+ YF
Sbjct: 246 WESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 240 bits (612), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 123/279 (44%), Positives = 175/279 (62%), Gaps = 22/279 (7%)
Query: 17 GEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGN 76
GE ALKKIR++ E EG P T IREI ILK+L+H N++KL +++ +
Sbjct: 26 GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT-------------- 71
Query: 77 KYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGS 136
+ +VFE++D DL L D K ++ QLL G+ YCH +VLHRD+K
Sbjct: 72 --KKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQ 129
Query: 137 NLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG 196
NLLI+ EG LK+ADFGLAR+F T+ V+TLWYR P++L+G+ KY +D+WSVG
Sbjct: 130 NLLINREGELKIADFGLARAFGIPVRK-YTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVG 188
Query: 197 CIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRV- 255
CIFAE++NG P+ PG +EA+QL +IF + G+P+ WP V+++P Y+ P+ T+ +
Sbjct: 189 CIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD---PNFTVYEPLP 245
Query: 256 -REVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
+ D ++LL KML LDP+QRI+AK AL+ YF
Sbjct: 246 WESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/279 (43%), Positives = 175/279 (62%), Gaps = 22/279 (7%)
Query: 17 GEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGN 76
GE ALKKIR++ E EG P T IREI ILK+L+H N++KL +++ +
Sbjct: 26 GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT-------------- 71
Query: 77 KYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGS 136
+ +VFE++D DL L D K ++ QLL G+ YCH +VLHRD+K
Sbjct: 72 --KKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQ 129
Query: 137 NLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG 196
NLLI+ EG LK+ADFGLAR+F T+ ++TLWYR P++L+G+ KY +D+WSVG
Sbjct: 130 NLLINREGELKIADFGLARAFGIPVRK-YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVG 188
Query: 197 CIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRV- 255
CIFAE++NG P+ PG +EA+QL +IF + G+P+ WP V+++P Y+ P+ T+ +
Sbjct: 189 CIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD---PNFTVYEPLP 245
Query: 256 -REVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
+ D ++LL KML LDP+QRI+AK AL+ YF
Sbjct: 246 WESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 235 bits (600), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 122/286 (42%), Positives = 180/286 (62%), Gaps = 18/286 (6%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ A++ G IVALK+IR+D E EG P TAIREI +LK+L H N++ L +++ S ER
Sbjct: 37 VYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHS---ER 92
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+VFE+M+ DL + D QIK Y+ QLL G+ +CH ++
Sbjct: 93 -------------CLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR 139
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
+LHRD+K NLLI+++G LKLADFGLAR+F + T+ V+TLWYR P++L+G+ KY
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIP-VRSYTHEVVTLWYRAPDVLMGSKKYS 198
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
+VD+WS+GCIFAE++ GKP+ PG + +QL KIF + G+P+ WP V ++P +
Sbjct: 199 TSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTF 258
Query: 248 SRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
K+ + F + ++LL ML DP++RISA+DA++ YF
Sbjct: 259 QVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 235 bits (599), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 122/286 (42%), Positives = 180/286 (62%), Gaps = 18/286 (6%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ A++ G IVALK+IR+D E EG P TAIREI +LK+L H N++ L +++ S ER
Sbjct: 37 VYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHS---ER 92
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+VFE+M+ DL + D QIK Y+ QLL G+ +CH ++
Sbjct: 93 -------------CLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR 139
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
+LHRD+K NLLI+++G LKLADFGLAR+F + T+ V+TLWYR P++L+G+ KY
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIP-VRSYTHEVVTLWYRAPDVLMGSKKYS 198
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
+VD+WS+GCIFAE++ GKP+ PG + +QL KIF + G+P+ WP V ++P +
Sbjct: 199 TSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTF 258
Query: 248 SRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
K+ + F + ++LL ML DP++RISA+DA++ YF
Sbjct: 259 QVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/299 (39%), Positives = 184/299 (61%), Gaps = 31/299 (10%)
Query: 6 SQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGP 65
+ V+ TG VALK++++D+E EG P TAIREI ++K+L+HEN+++L +++ +
Sbjct: 19 ATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKELKHENIVRLYDVIHT--- 74
Query: 66 ERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRP-------GLRFTVPQIKCYMKQLLT 118
+VFE+MD+DL D GL + +K + QLL
Sbjct: 75 -------------ENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNL--VKYFQWQLLQ 119
Query: 119 GLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPE 178
GL +CH N++LHRD+K NLLI+ G LKL DFGLAR+F NT ++ V+TLWYR P+
Sbjct: 120 GLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP-VNTFSSEVVTLWYRAPD 178
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK 238
+L+G+ Y ++D+WS GCI AE++ GKP+ PG N+ EQL IF++ G+P+E++WP V+K
Sbjct: 179 VLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTK 238
Query: 239 MPAYN---HFKPSRTMKRRVREVFRH-FDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
+P YN +P R +++ ++ + D + ++ L +L L+P R+SAK AL +F
Sbjct: 239 LPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF 297
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 221 bits (562), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 118/287 (41%), Positives = 171/287 (59%), Gaps = 19/287 (6%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
VF A+ +T EIVALK++R+D++ EG P +A+REI +LK+L+H+N+++L +++ S
Sbjct: 18 VFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS----- 72
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+VFE+ D DL D +K ++ QLL GL +CH
Sbjct: 73 -----------DKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
VLHRD+K NLLI+ G LKLA+FGLAR+F + V+TLWYRPP++L GA Y
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIP-VRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 188 PAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
++DMWS GCIFAEL N G+P+ PG + +QL +IF L G+P E WP ++K+P Y +
Sbjct: 181 TSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY- 239
Query: 247 PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
P + V + +LL+ +L +P QRISA++AL YF
Sbjct: 240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 221 bits (562), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 118/287 (41%), Positives = 170/287 (59%), Gaps = 19/287 (6%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
VF A+ +T EIVALK++R+D++ EG P +A+REI +LK+L+H+N+++L +++ S
Sbjct: 18 VFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS----- 72
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+VFE+ D DL D +K ++ QLL GL +CH
Sbjct: 73 -----------DKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
VLHRD+K NLLI+ G LKLADFGLAR+F + V+TLWYRPP++L GA Y
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIP-VRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 188 PAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
++DMWS GCIFAEL N +P+ PG + +QL +IF L G+P E WP ++K+P Y +
Sbjct: 181 TSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY- 239
Query: 247 PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
P + V + +LL+ +L +P QRISA++AL YF
Sbjct: 240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/293 (41%), Positives = 167/293 (56%), Gaps = 24/293 (8%)
Query: 6 SQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGP 65
+ V+ + T +VALK+IR+++E EG P TAIRE+ +LK L+H N++ L +I+ +
Sbjct: 16 ATVYKGKSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHT--- 71
Query: 66 ERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHV 125
S +VFEY+D DL D G + +K ++ QLL GL YCH
Sbjct: 72 -------------EKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHR 118
Query: 126 NQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATK 185
+VLHRD+K NLLI+ G LKLADFGLAR+ S T N V+TLWYRPP++LLG+T
Sbjct: 119 QKVLHRDLKPQNLLINERGELKLADFGLARAKSIP-TKTYDNEVVTLWYRPPDILLGSTD 177
Query: 186 YGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHF 245
Y +DMW VGCIF E+ G+P+ PG EQL IF + G+P E WPG+ + F
Sbjct: 178 YSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGI---LSNEEF 234
Query: 246 KPSRTMKRRVREVFRH---FDRHALELLEKMLMLDPSQRISAKDALDSEYFWT 295
K K R + H D +LL K+L + RISA+DA+ +F +
Sbjct: 235 KTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLS 287
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 218 bits (556), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 121/293 (41%), Positives = 179/293 (61%), Gaps = 25/293 (8%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V+ A + T E VA+K+IR+++E+EG P TAIRE+ +LK+LQH N+I+LK ++
Sbjct: 49 EVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVI------ 102
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADR-PGLRFTVPQIKCYMKQLLTGLHYCHV 125
+ +++FEY ++DL D+ P + V IK ++ QL+ G+++CH
Sbjct: 103 ----------HHNHRLHLIFEYAENDLKKYMDKNPDVSMRV--IKSFLYQLINGVNFCHS 150
Query: 126 NQVLHRDIKGSNLLIDNEGN-----LKLADFGLARSFSYDHNNTLTNRVITLWYRPPELL 180
+ LHRD+K NLL+ LK+ DFGLAR+F T+ +ITLWYRPPE+L
Sbjct: 151 RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQ-FTHEIITLWYRPPEIL 209
Query: 181 LGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMP 240
LG+ Y +VD+WS+ CI+AE+L P+ PG +E +QL KIFE+ G PD+T WPGV+ +P
Sbjct: 210 LGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALP 269
Query: 241 AYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
+ P K R + D L+LL ML +DP +RISAK+AL+ YF
Sbjct: 270 DWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYF 322
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 214 bits (545), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 121/306 (39%), Positives = 172/306 (56%), Gaps = 22/306 (7%)
Query: 5 ISQVFMAREIKTGEIVALKKIRM---DNEKEGFPITAIREIKILKKLQHENVIKLKEIVT 61
+ V+ AR+ T +IVA+KKI++ K+G TA+REIK+L++L H N+I
Sbjct: 23 FATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII------- 75
Query: 62 SPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
G D ++ + +VF++M+ DL + L T IK YM L GL
Sbjct: 76 ---------GLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLE 126
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLL 181
Y H + +LHRD+K +NLL+D G LKLADFGLA+SF N ++V+T WYR PELL
Sbjct: 127 YLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFG-SPNRAYXHQVVTRWYRAPELLF 185
Query: 182 GATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPA 241
GA YG VDMW+VGCI AELL P LPG ++ +QL++IFE G+P E WP + +P
Sbjct: 186 GARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPD 245
Query: 242 YNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCD 301
Y FK + + +F L+L++ + + +P RI+A AL +YF P P
Sbjct: 246 YVTFKSFPGIP--LHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTP 303
Query: 302 PKSLPK 307
LP+
Sbjct: 304 GCQLPR 309
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/295 (40%), Positives = 170/295 (57%), Gaps = 25/295 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQ---HENVIKLKEIVTSPG 64
V+ AR+ +G VALK +R+ N +EG PI+ +RE+ +L++L+ H NV++L ++ +
Sbjct: 20 VYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR 79
Query: 65 PERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADR---PGLRFTVPQIKCYMKQLLTGLH 121
+R+ + +VFE++D DL D+ PGL IK M+Q L GL
Sbjct: 80 TDREIK-----------VTLVFEHVDQDLRTYLDKAPPPGL--PAETIKDLMRQFLRGLD 126
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLL 181
+ H N ++HRD+K N+L+ + G +KLADFGLAR +SY L V+TLWYR PE+LL
Sbjct: 127 FLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY--QMALAPVVVTLWYRAPEVLL 184
Query: 182 GATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPA 241
+T Y VDMWSVGCIFAE+ KP+ G +EA+QL KIF+L G P E WP +P
Sbjct: 185 QST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPR 243
Query: 242 YNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD 296
F P R V+ V + +LL +ML +P +RISA AL Y D
Sbjct: 244 -GAFPPRG--PRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD 295
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/295 (40%), Positives = 170/295 (57%), Gaps = 25/295 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQ---HENVIKLKEIVTSPG 64
V+ AR+ +G VALK +R+ N +EG PI+ +RE+ +L++L+ H NV++L ++ +
Sbjct: 20 VYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR 79
Query: 65 PERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADR---PGLRFTVPQIKCYMKQLLTGLH 121
+R+ + +VFE++D DL D+ PGL IK M+Q L GL
Sbjct: 80 TDREIK-----------VTLVFEHVDQDLRTYLDKAPPPGL--PAETIKDLMRQFLRGLD 126
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLL 181
+ H N ++HRD+K N+L+ + G +KLADFGLAR +SY L V+TLWYR PE+LL
Sbjct: 127 FLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY--QMALDPVVVTLWYRAPEVLL 184
Query: 182 GATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPA 241
+T Y VDMWSVGCIFAE+ KP+ G +EA+QL KIF+L G P E WP +P
Sbjct: 185 QST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPR 243
Query: 242 YNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD 296
F P R V+ V + +LL +ML +P +RISA AL Y D
Sbjct: 244 -GAFPPRG--PRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD 295
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/295 (40%), Positives = 170/295 (57%), Gaps = 25/295 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQ---HENVIKLKEIVTSPG 64
V+ AR+ +G VALK +R+ N +EG PI+ +RE+ +L++L+ H NV++L ++ +
Sbjct: 20 VYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR 79
Query: 65 PERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADR---PGLRFTVPQIKCYMKQLLTGLH 121
+R+ + +VFE++D DL D+ PGL IK M+Q L GL
Sbjct: 80 TDREIK-----------VTLVFEHVDQDLRTYLDKAPPPGL--PAETIKDLMRQFLRGLD 126
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLL 181
+ H N ++HRD+K N+L+ + G +KLADFGLAR +SY L V+TLWYR PE+LL
Sbjct: 127 FLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY--QMALFPVVVTLWYRAPEVLL 184
Query: 182 GATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPA 241
+T Y VDMWSVGCIFAE+ KP+ G +EA+QL KIF+L G P E WP +P
Sbjct: 185 QST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPR 243
Query: 242 YNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD 296
F P R V+ V + +LL +ML +P +RISA AL Y D
Sbjct: 244 -GAFPPRG--PRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD 295
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/295 (39%), Positives = 177/295 (60%), Gaps = 28/295 (9%)
Query: 7 QVFMAREIKTG-EIVALKKIRMDNEKEGFPITAIREIKILKKLQ---HENVIKLKEIVTS 62
+VF AR++K G VALK++R+ +EG P++ IRE+ +L+ L+ H NV++L ++ T
Sbjct: 26 KVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTV 85
Query: 63 PGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADR---PGLRFTVPQIKCYMKQLLTG 119
+R+ + +VFE++D DLT D+ PG+ IK M QLL G
Sbjct: 86 SRTDRETK-----------LTLVFEHVDQDLTTYLDKVPEPGV--PTETIKDMMFQLLRG 132
Query: 120 LHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPEL 179
L + H ++V+HRD+K N+L+ + G +KLADFGLAR +S+ LT+ V+TLWYR PE+
Sbjct: 133 LDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF--QMALTSVVVTLWYRAPEV 190
Query: 180 LLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM 239
LL ++ Y VD+WSVGCIFAE+ KP+ G ++ +QL KI ++ G P E WP +
Sbjct: 191 LLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 249
Query: 240 PAYN-HFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
P H K ++ +++ V ++ D +LL K L +P++RISA AL YF
Sbjct: 250 PRQAFHSKSAQPIEKFVTDI----DELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/295 (39%), Positives = 177/295 (60%), Gaps = 28/295 (9%)
Query: 7 QVFMAREIKTG-EIVALKKIRMDNEKEGFPITAIREIKILKKLQ---HENVIKLKEIVTS 62
+VF AR++K G VALK++R+ +EG P++ IRE+ +L+ L+ H NV++L ++ T
Sbjct: 26 KVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTV 85
Query: 63 PGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADR---PGLRFTVPQIKCYMKQLLTG 119
+R+ + +VFE++D DLT D+ PG+ IK M QLL G
Sbjct: 86 SRTDRETK-----------LTLVFEHVDQDLTTYLDKVPEPGV--PTETIKDMMFQLLRG 132
Query: 120 LHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPEL 179
L + H ++V+HRD+K N+L+ + G +KLADFGLAR +S+ LT+ V+TLWYR PE+
Sbjct: 133 LDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF--QMALTSVVVTLWYRAPEV 190
Query: 180 LLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM 239
LL ++ Y VD+WSVGCIFAE+ KP+ G ++ +QL KI ++ G P E WP +
Sbjct: 191 LLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 249
Query: 240 PAYN-HFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
P H K ++ +++ V ++ D +LL K L +P++RISA AL YF
Sbjct: 250 PRQAFHSKSAQPIEKFVTDI----DELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 116/295 (39%), Positives = 177/295 (60%), Gaps = 28/295 (9%)
Query: 7 QVFMAREIKTG-EIVALKKIRMDNEKEGFPITAIREIKILKKLQ---HENVIKLKEIVTS 62
+VF AR++K G VALK++R+ +EG P++ IRE+ +L+ L+ H NV++L ++ T
Sbjct: 26 KVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTV 85
Query: 63 PGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADR---PGLRFTVPQIKCYMKQLLTG 119
+R+ + +VFE++D DLT D+ PG+ IK M QLL G
Sbjct: 86 SRTDRETK-----------LTLVFEHVDQDLTTYLDKVPEPGV--PTETIKDMMFQLLRG 132
Query: 120 LHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPEL 179
L + H ++V+HRD+K N+L+ + G +KLADFGLAR +S+ LT+ V+TLWYR PE+
Sbjct: 133 LDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF--QMALTSVVVTLWYRAPEV 190
Query: 180 LLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM 239
LL ++ Y VD+WSVGCIFAE+ KP+ G ++ +QL KI ++ G P E WP +
Sbjct: 191 LLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 249
Query: 240 PAYN-HFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
P H K ++ +++ V ++ D +LL K L +P++RISA AL YF
Sbjct: 250 PRQAFHSKSAQPIEKFVTDI----DELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 169/298 (56%), Gaps = 28/298 (9%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEG---FPITAIREIKILKKLQ---HENVIKLKEIVT 61
V+ AR+ +G VALK +R+ N G PI+ +RE+ +L++L+ H NV++L ++
Sbjct: 25 VYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCA 84
Query: 62 SPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADR---PGLRFTVPQIKCYMKQLLT 118
+ +R+ + +VFE++D DL D+ PGL IK M+Q L
Sbjct: 85 TSRTDREIK-----------VTLVFEHVDQDLRTYLDKAPPPGL--PAETIKDLMRQFLR 131
Query: 119 GLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPE 178
GL + H N ++HRD+K N+L+ + G +KLADFGLAR +SY LT V+TLWYR PE
Sbjct: 132 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY--QMALTPVVVTLWYRAPE 189
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK 238
+LL +T Y VDMWSVGCIFAE+ KP+ G +EA+QL KIF+L G P E WP
Sbjct: 190 VLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVS 248
Query: 239 MPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD 296
+P F P R V+ V + +LL +ML +P +RISA AL Y D
Sbjct: 249 LPR-GAFPPRG--PRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD 303
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 110/286 (38%), Positives = 164/286 (57%), Gaps = 25/286 (8%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE--RDEQGRPDGNK 77
VA+KKI E + + +REI+IL + +HENVI +++I+ + E RD
Sbjct: 71 VAIKKIS-PFEHQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRD--------- 120
Query: 78 YRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSN 137
Y+V + M+ DL L L + I ++ Q+L GL Y H VLHRD+K SN
Sbjct: 121 ----VYIVQDLMETDLYKLLKSQQL--SNDHICYFLYQILRGLKYIHSANVLHRDLKPSN 174
Query: 138 LLIDNEGNLKLADFGLARSFS--YDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSV 195
LLI+ +LK+ DFGLAR +DH LT V T WYR PE++L + Y ++D+WSV
Sbjct: 175 LLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSV 234
Query: 196 GCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK--PSRTMKR 253
GCI AE+L+ +PI PGK+ +QL+ I + GSP + + M A N+ + PS+T K
Sbjct: 235 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQSLPSKT-KV 293
Query: 254 RVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
++F D AL+LL++ML +P++RI+ ++AL Y + DP
Sbjct: 294 AWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYYDP 339
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 165/310 (53%), Gaps = 49/310 (15%)
Query: 21 ALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRG 80
ALK+I E G ++A REI +L++L+H NVI L+++ S +
Sbjct: 52 ALKQI----EGTGISMSACREIALLRELKHPNVISLQKVFLSHADRK------------- 94
Query: 81 STYMVFEYMDHDLTGL--------ADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRD 132
+++F+Y +HDL + A++ ++ +K + Q+L G+HY H N VLHRD
Sbjct: 95 -VWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRD 153
Query: 133 IKGSNLLIDNEG----NLKLADFGLARSFSYDHN--NTLTNRVITLWYRPPELLLGATKY 186
+K +N+L+ EG +K+AD G AR F+ L V+T WYR PELLLGA Y
Sbjct: 154 LKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHY 213
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEA---------EQLSKIFELCGSPDETIWPGVS 237
A+D+W++GCIFAELL +PI + E +QL +IF + G P + W +
Sbjct: 214 TKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIK 273
Query: 238 KMPAYNHF-KPSRTMKRRVREVFRHFDRH-------ALELLEKMLMLDPSQRISAKDALD 289
KMP ++ K R + ++ ++H A LL+K+L +DP +RI+++ A+
Sbjct: 274 KMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 333
Query: 290 SEYFWTDPLP 299
YF DPLP
Sbjct: 334 DPYFLEDPLP 343
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 161/284 (56%), Gaps = 21/284 (7%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KKI E + + +REIKIL + +HEN+I + +I+ +P E+
Sbjct: 49 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ-----------M 96
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V + M+ DL L L + I ++ Q+L GL Y H VLHRD+K SNLL
Sbjct: 97 KDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL 154
Query: 140 IDNEGNLKLADFGLARSFSYDHNNT--LTNRVITLWYRPPELLLGATKYGPAVDMWSVGC 197
++ +LK+ DFGLAR DH++T LT V T WYR PE++L + Y ++D+WSVGC
Sbjct: 155 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 214
Query: 198 IFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRV-- 255
I AE+L+ +PI PGK+ +QL+ I + GSP++ + + A N+ S K +V
Sbjct: 215 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKARNYLL-SLPHKNKVPW 273
Query: 256 REVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+F + D AL+LL+KML +P +RI + AL Y + DP
Sbjct: 274 NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 317
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 160/284 (56%), Gaps = 21/284 (7%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KKI E + + +REIKIL + +HEN+I + +I+ +P E+
Sbjct: 55 VAIKKIS-PFEHQTYXQRTLREIKILLRFRHENIIGINDIIRAPTIEQ-----------M 102
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V + M+ DL L L + I ++ Q+L GL Y H VLHRD+K SNLL
Sbjct: 103 KDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL 160
Query: 140 IDNEGNLKLADFGLARSFSYDHNNT--LTNRVITLWYRPPELLLGATKYGPAVDMWSVGC 197
++ +LK+ DFGLAR DH++T LT V T WYR PE++L + Y ++D+WSVGC
Sbjct: 161 LNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 220
Query: 198 IFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRV-- 255
I AE+L+ +PI PGK+ +QL+ I + GSP + + + A N+ S K +V
Sbjct: 221 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL-SLPHKNKVPW 279
Query: 256 REVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+F + D AL+LL+KML +P +RI + AL Y + DP
Sbjct: 280 NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 323
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 160/284 (56%), Gaps = 21/284 (7%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KKI E + + +REIKIL + +HEN+I + +I+ +P E+
Sbjct: 53 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ-----------M 100
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V + M+ DL L L + I ++ Q+L GL Y H VLHRD+K SNLL
Sbjct: 101 KDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL 158
Query: 140 IDNEGNLKLADFGLARSFSYDHNNT--LTNRVITLWYRPPELLLGATKYGPAVDMWSVGC 197
++ +LK+ DFGLAR DH++T LT V T WYR PE++L + Y ++D+WSVGC
Sbjct: 159 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 218
Query: 198 IFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRV-- 255
I AE+L+ +PI PGK+ +QL+ I + GSP + + + A N+ S K +V
Sbjct: 219 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL-SLPHKNKVPW 277
Query: 256 REVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+F + D AL+LL+KML +P +RI + AL Y + DP
Sbjct: 278 NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 321
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 160/284 (56%), Gaps = 21/284 (7%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KKI E + + +REIKIL + +HEN+I + +I+ +P E+
Sbjct: 71 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ-----------M 118
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V + M+ DL L L + I ++ Q+L GL Y H VLHRD+K SNLL
Sbjct: 119 KDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL 176
Query: 140 IDNEGNLKLADFGLARSFSYDHNNT--LTNRVITLWYRPPELLLGATKYGPAVDMWSVGC 197
++ +LK+ DFGLAR DH++T LT V T WYR PE++L + Y ++D+WSVGC
Sbjct: 177 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 236
Query: 198 IFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRV-- 255
I AE+L+ +PI PGK+ +QL+ I + GSP + + + A N+ S K +V
Sbjct: 237 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL-SLPHKNKVPW 295
Query: 256 REVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+F + D AL+LL+KML +P +RI + AL Y + DP
Sbjct: 296 NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 339
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 160/284 (56%), Gaps = 21/284 (7%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KKI E + + +REIKIL + +HEN+I + +I+ +P E+
Sbjct: 51 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ-----------M 98
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V + M+ DL L L + I ++ Q+L GL Y H VLHRD+K SNLL
Sbjct: 99 KDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL 156
Query: 140 IDNEGNLKLADFGLARSFSYDHNNT--LTNRVITLWYRPPELLLGATKYGPAVDMWSVGC 197
++ +LK+ DFGLAR DH++T LT V T WYR PE++L + Y ++D+WSVGC
Sbjct: 157 LNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 216
Query: 198 IFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRV-- 255
I AE+L+ +PI PGK+ +QL+ I + GSP + + + A N+ S K +V
Sbjct: 217 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL-SLPHKNKVPW 275
Query: 256 REVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+F + D AL+LL+KML +P +RI + AL Y + DP
Sbjct: 276 NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 319
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 160/284 (56%), Gaps = 21/284 (7%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KKI E + + +REIKIL + +HEN+I + +I+ +P E+
Sbjct: 51 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ-----------M 98
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V + M+ DL L L + I ++ Q+L GL Y H VLHRD+K SNLL
Sbjct: 99 KDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL 156
Query: 140 IDNEGNLKLADFGLARSFSYDHNNT--LTNRVITLWYRPPELLLGATKYGPAVDMWSVGC 197
++ +LK+ DFGLAR DH++T LT V T WYR PE++L + Y ++D+WSVGC
Sbjct: 157 LNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 216
Query: 198 IFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRV-- 255
I AE+L+ +PI PGK+ +QL+ I + GSP + + + A N+ S K +V
Sbjct: 217 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLL-SLPHKNKVPW 275
Query: 256 REVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+F + D AL+LL+KML +P +RI + AL Y + DP
Sbjct: 276 NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 319
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 160/284 (56%), Gaps = 21/284 (7%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KKI E + + +REIKIL + +HEN+I + +I+ +P E+
Sbjct: 55 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ-----------M 102
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V + M+ DL L L + I ++ Q+L GL Y H VLHRD+K SNLL
Sbjct: 103 KDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL 160
Query: 140 IDNEGNLKLADFGLARSFSYDHNNT--LTNRVITLWYRPPELLLGATKYGPAVDMWSVGC 197
++ +LK+ DFGLAR DH++T LT V T WYR PE++L + Y ++D+WSVGC
Sbjct: 161 LNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 220
Query: 198 IFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRV-- 255
I AE+L+ +PI PGK+ +QL+ I + GSP + + + A N+ S K +V
Sbjct: 221 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL-SLPHKNKVPW 279
Query: 256 REVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+F + D AL+LL+KML +P +RI + AL Y + DP
Sbjct: 280 NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 323
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 160/284 (56%), Gaps = 21/284 (7%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KKI E + + +REIKIL + +HEN+I + +I+ +P E+
Sbjct: 51 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ-----------M 98
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V + M+ DL L L + I ++ Q+L GL Y H VLHRD+K SNLL
Sbjct: 99 KDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL 156
Query: 140 IDNEGNLKLADFGLARSFSYDHNNT--LTNRVITLWYRPPELLLGATKYGPAVDMWSVGC 197
++ +LK+ DFGLAR DH++T LT V T WYR PE++L + Y ++D+WSVGC
Sbjct: 157 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 216
Query: 198 IFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRV-- 255
I AE+L+ +PI PGK+ +QL+ I + GSP + + + A N+ S K +V
Sbjct: 217 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL-SLPHKNKVPW 275
Query: 256 REVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+F + D AL+LL+KML +P +RI + AL Y + DP
Sbjct: 276 NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 319
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 160/284 (56%), Gaps = 21/284 (7%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KKI E + + +REIKIL + +HEN+I + +I+ +P E+
Sbjct: 49 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ-----------M 96
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V + M+ DL L L + I ++ Q+L GL Y H VLHRD+K SNLL
Sbjct: 97 KDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL 154
Query: 140 IDNEGNLKLADFGLARSFSYDHNNT--LTNRVITLWYRPPELLLGATKYGPAVDMWSVGC 197
++ +LK+ DFGLAR DH++T LT V T WYR PE++L + Y ++D+WSVGC
Sbjct: 155 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 214
Query: 198 IFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRV-- 255
I AE+L+ +PI PGK+ +QL+ I + GSP + + + A N+ S K +V
Sbjct: 215 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL-SLPHKNKVPW 273
Query: 256 REVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+F + D AL+LL+KML +P +RI + AL Y + DP
Sbjct: 274 NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 317
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 160/284 (56%), Gaps = 21/284 (7%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KKI E + + +REIKIL + +HEN+I + +I+ +P E+
Sbjct: 59 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ-----------M 106
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V + M+ DL L L + I ++ Q+L GL Y H VLHRD+K SNLL
Sbjct: 107 KDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL 164
Query: 140 IDNEGNLKLADFGLARSFSYDHNNT--LTNRVITLWYRPPELLLGATKYGPAVDMWSVGC 197
++ +LK+ DFGLAR DH++T LT V T WYR PE++L + Y ++D+WSVGC
Sbjct: 165 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 224
Query: 198 IFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRV-- 255
I AE+L+ +PI PGK+ +QL+ I + GSP + + + A N+ S K +V
Sbjct: 225 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL-SLPHKNKVPW 283
Query: 256 REVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+F + D AL+LL+KML +P +RI + AL Y + DP
Sbjct: 284 NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 327
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 160/284 (56%), Gaps = 21/284 (7%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KKI E + + +REIKIL + +HEN+I + +I+ +P E+
Sbjct: 51 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ-----------M 98
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V + M+ DL L L + I ++ Q+L GL Y H VLHRD+K SNLL
Sbjct: 99 KDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL 156
Query: 140 IDNEGNLKLADFGLARSFSYDHNNT--LTNRVITLWYRPPELLLGATKYGPAVDMWSVGC 197
++ +LK+ DFGLAR DH++T LT V T WYR PE++L + Y ++D+WSVGC
Sbjct: 157 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 216
Query: 198 IFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRV-- 255
I AE+L+ +PI PGK+ +QL+ I + GSP + + + A N+ S K +V
Sbjct: 217 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL-SLPHKNKVPW 275
Query: 256 REVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+F + D AL+LL+KML +P +RI + AL Y + DP
Sbjct: 276 NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 319
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 160/284 (56%), Gaps = 21/284 (7%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KKI E + + +REIKIL + +HEN+I + +I+ +P E+
Sbjct: 56 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ-----------M 103
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V + M+ DL L L + I ++ Q+L GL Y H VLHRD+K SNLL
Sbjct: 104 KDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL 161
Query: 140 IDNEGNLKLADFGLARSFSYDHNNT--LTNRVITLWYRPPELLLGATKYGPAVDMWSVGC 197
++ +LK+ DFGLAR DH++T LT V T WYR PE++L + Y ++D+WSVGC
Sbjct: 162 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 221
Query: 198 IFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRV-- 255
I AE+L+ +PI PGK+ +QL+ I + GSP + + + A N+ S K +V
Sbjct: 222 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL-SLPHKNKVPW 280
Query: 256 REVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+F + D AL+LL+KML +P +RI + AL Y + DP
Sbjct: 281 NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 324
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 160/284 (56%), Gaps = 21/284 (7%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KKI E + + +REIKIL + +HEN+I + +I+ +P E+
Sbjct: 57 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ-----------M 104
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V + M+ DL L L + I ++ Q+L GL Y H VLHRD+K SNLL
Sbjct: 105 KDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL 162
Query: 140 IDNEGNLKLADFGLARSFSYDHNNT--LTNRVITLWYRPPELLLGATKYGPAVDMWSVGC 197
++ +LK+ DFGLAR DH++T LT V T WYR PE++L + Y ++D+WSVGC
Sbjct: 163 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 222
Query: 198 IFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRV-- 255
I AE+L+ +PI PGK+ +QL+ I + GSP + + + A N+ S K +V
Sbjct: 223 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL-SLPHKNKVPW 281
Query: 256 REVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+F + D AL+LL+KML +P +RI + AL Y + DP
Sbjct: 282 NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 325
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 160/284 (56%), Gaps = 21/284 (7%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KKI E + + +REIKIL + +HEN+I + +I+ +P E+
Sbjct: 48 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ-----------M 95
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V + M+ DL L L + I ++ Q+L GL Y H VLHRD+K SNLL
Sbjct: 96 KDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL 153
Query: 140 IDNEGNLKLADFGLARSFSYDHNNT--LTNRVITLWYRPPELLLGATKYGPAVDMWSVGC 197
++ +LK+ DFGLAR DH++T LT V T WYR PE++L + Y ++D+WSVGC
Sbjct: 154 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 213
Query: 198 IFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRV-- 255
I AE+L+ +PI PGK+ +QL+ I + GSP + + + A N+ S K +V
Sbjct: 214 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL-SLPHKNKVPW 272
Query: 256 REVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+F + D AL+LL+KML +P +RI + AL Y + DP
Sbjct: 273 NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 316
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 160/284 (56%), Gaps = 21/284 (7%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KKI E + + +REIKIL + +HEN+I + +I+ +P E+
Sbjct: 55 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ-----------M 102
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V + M+ DL L L + I ++ Q+L GL Y H VLHRD+K SNLL
Sbjct: 103 KDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL 160
Query: 140 IDNEGNLKLADFGLARSFSYDHNNT--LTNRVITLWYRPPELLLGATKYGPAVDMWSVGC 197
++ +LK+ DFGLAR DH++T LT V T WYR PE++L + Y ++D+WSVGC
Sbjct: 161 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 220
Query: 198 IFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRV-- 255
I AE+L+ +PI PGK+ +QL+ I + GSP + + + A N+ S K +V
Sbjct: 221 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL-SLPHKNKVPW 279
Query: 256 REVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+F + D AL+LL+KML +P +RI + AL Y + DP
Sbjct: 280 NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 323
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 160/284 (56%), Gaps = 21/284 (7%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KKI E + + +REIKIL + +HEN+I + +I+ +P E+
Sbjct: 51 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ-----------M 98
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V + M+ DL L L + I ++ Q+L GL Y H VLHRD+K SNLL
Sbjct: 99 KDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL 156
Query: 140 IDNEGNLKLADFGLARSFSYDHNNT--LTNRVITLWYRPPELLLGATKYGPAVDMWSVGC 197
++ +LK+ DFGLAR DH++T LT V T WYR PE++L + Y ++D+WSVGC
Sbjct: 157 LNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 216
Query: 198 IFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRV-- 255
I AE+L+ +PI PGK+ +QL+ I + GSP + + + A N+ S K +V
Sbjct: 217 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLL-SLPHKNKVPW 275
Query: 256 REVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+F + D AL+LL+KML +P +RI + AL Y + DP
Sbjct: 276 NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 319
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 160/284 (56%), Gaps = 21/284 (7%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KKI E + + +REIKIL + +HEN+I + +I+ +P E+
Sbjct: 55 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ-----------M 102
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V + M+ DL L L + I ++ Q+L GL Y H VLHRD+K SNLL
Sbjct: 103 KDVYIVQDLMETDLYKLLKCQHL--SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL 160
Query: 140 IDNEGNLKLADFGLARSFSYDHNNT--LTNRVITLWYRPPELLLGATKYGPAVDMWSVGC 197
++ +LK+ DFGLAR DH++T LT V T WYR PE++L + Y ++D+WSVGC
Sbjct: 161 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 220
Query: 198 IFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRV-- 255
I AE+L+ +PI PGK+ +QL+ I + GSP + + + A N+ S K +V
Sbjct: 221 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL-SLPHKNKVPW 279
Query: 256 REVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+F + D AL+LL+KML +P +RI + AL Y + DP
Sbjct: 280 NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 323
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 159/284 (55%), Gaps = 21/284 (7%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KKI E + + +REIKIL +HEN+I + +I+ +P E+
Sbjct: 53 VAIKKIS-PFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQ-----------M 100
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V + M+ DL L L + I ++ Q+L GL Y H VLHRD+K SNLL
Sbjct: 101 KDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL 158
Query: 140 IDNEGNLKLADFGLARSFSYDHNNT--LTNRVITLWYRPPELLLGATKYGPAVDMWSVGC 197
++ +LK+ DFGLAR DH++T LT V T WYR PE++L + Y ++D+WSVGC
Sbjct: 159 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 218
Query: 198 IFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRV-- 255
I AE+L+ +PI PGK+ +QL+ I + GSP + + + A N+ S K +V
Sbjct: 219 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL-SLPHKNKVPW 277
Query: 256 REVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+F + D AL+LL+KML +P +RI + AL Y + DP
Sbjct: 278 NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYDP 321
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 158/284 (55%), Gaps = 21/284 (7%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KKI E + + +REIKIL + +HEN+I + +I+ +P E+
Sbjct: 71 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ-----------M 118
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V M DL L L + I ++ Q+L GL Y H VLHRD+K SNLL
Sbjct: 119 KDVYLVTHLMGADLYKLLKTQHL--SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL 176
Query: 140 IDNEGNLKLADFGLARSFSYDHNNT--LTNRVITLWYRPPELLLGATKYGPAVDMWSVGC 197
++ +LK+ DFGLAR DH++T LT V T WYR PE++L + Y ++D+WSVGC
Sbjct: 177 LNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 236
Query: 198 IFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRV-- 255
I AE+L+ +PI PGK+ +QL+ I + GSP + + + A N+ S K +V
Sbjct: 237 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL-SLPHKNKVPW 295
Query: 256 REVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+F + D AL+LL+KML +P +RI + AL Y + DP
Sbjct: 296 NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 339
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 108/288 (37%), Positives = 155/288 (53%), Gaps = 21/288 (7%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V AR TG+ VA+KKI + +RE+KILK +H+N+I +K+I+ P
Sbjct: 71 VSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYG 130
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGL--ADRPGLRFTVPQIKCYMKQLLTGLHYCHV 125
+ + S Y+V + M+ DL + + +P T+ ++ ++ QLL GL Y H
Sbjct: 131 EFK----------SVYVVLDLMESDLHQIIHSSQP---LTLEHVRYFLYQLLRGLKYMHS 177
Query: 126 NQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSY---DHNNTLTNRVITLWYRPPELLLG 182
QV+HRD+K SNLL++ LK+ DFG+AR +H +T V T WYR PEL+L
Sbjct: 178 AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLS 237
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWP--GVSKMP 240
+Y A+D+WSVGCIF E+L + + PGKN QL I + G+P + G ++
Sbjct: 238 LHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVR 297
Query: 241 AYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDAL 288
AY P R V+ DR AL LL +ML +PS RISA AL
Sbjct: 298 AYIQSLPPRQ-PVPWETVYPGADRQALSLLGRMLRFEPSARISAAAAL 344
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 107/284 (37%), Positives = 160/284 (56%), Gaps = 21/284 (7%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA++KI E + + +REIKIL + +HEN+I + +I+ +P E+
Sbjct: 55 VAIRKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ-----------M 102
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V + M+ DL L L + I ++ Q+L GL Y H VLHRD+K SNLL
Sbjct: 103 KDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL 160
Query: 140 IDNEGNLKLADFGLARSFSYDHNNT--LTNRVITLWYRPPELLLGATKYGPAVDMWSVGC 197
++ +LK+ DFGLAR DH++T LT V T WYR PE++L + Y ++D+WSVGC
Sbjct: 161 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 220
Query: 198 IFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRV-- 255
I AE+L+ +PI PGK+ +QL+ I + GSP + + + A N+ S K +V
Sbjct: 221 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL-SLPHKNKVPW 279
Query: 256 REVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+F + D AL+LL+KML +P +RI + AL Y + DP
Sbjct: 280 NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 323
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/284 (37%), Positives = 159/284 (55%), Gaps = 21/284 (7%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KKI E + + +REIKIL + +HEN+I + +I+ +P E+
Sbjct: 55 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ-----------M 102
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V + M+ DL L L + I ++ Q+L GL Y H VLHRD+K SNLL
Sbjct: 103 KDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL 160
Query: 140 IDNEGNLKLADFGLARSFSYDHNNT--LTNRVITLWYRPPELLLGATKYGPAVDMWSVGC 197
++ +LK+ DFGLAR DH++T L V T WYR PE++L + Y ++D+WSVGC
Sbjct: 161 LNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGC 220
Query: 198 IFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRV-- 255
I AE+L+ +PI PGK+ +QL+ I + GSP + + + A N+ S K +V
Sbjct: 221 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL-SLPHKNKVPW 279
Query: 256 REVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+F + D AL+LL+KML +P +RI + AL Y + DP
Sbjct: 280 NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 323
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/284 (37%), Positives = 159/284 (55%), Gaps = 21/284 (7%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KKI E + + +REIKIL + +HEN+I + +I+ +P E+
Sbjct: 56 VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ-----------M 103
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V + M+ DL L L + I ++ Q+L GL Y H VLHRD+K SNLL
Sbjct: 104 KDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL 161
Query: 140 IDNEGNLKLADFGLARSFSYDHNNT--LTNRVITLWYRPPELLLGATKYGPAVDMWSVGC 197
++ +LK+ DFGLAR DH++T L V T WYR PE++L + Y ++D+WSVGC
Sbjct: 162 LNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGC 221
Query: 198 IFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRV-- 255
I AE+L+ +PI PGK+ +QL+ I + GSP + + + A N+ S K +V
Sbjct: 222 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL-SLPHKNKVPW 280
Query: 256 REVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+F + D AL+LL+KML +P +RI + AL Y + DP
Sbjct: 281 NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 324
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/288 (37%), Positives = 155/288 (53%), Gaps = 21/288 (7%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V AR TG+ VA+KKI + +RE+KILK +H+N+I +K+I+ P
Sbjct: 70 VSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYG 129
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGL--ADRPGLRFTVPQIKCYMKQLLTGLHYCHV 125
+ + S Y+V + M+ DL + + +P T+ ++ ++ QLL GL Y H
Sbjct: 130 EFK----------SVYVVLDLMESDLHQIIHSSQP---LTLEHVRYFLYQLLRGLKYMHS 176
Query: 126 NQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSY---DHNNTLTNRVITLWYRPPELLLG 182
QV+HRD+K SNLL++ LK+ DFG+AR +H +T V T WYR PEL+L
Sbjct: 177 AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLS 236
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWP--GVSKMP 240
+Y A+D+WSVGCIF E+L + + PGKN QL I + G+P + G ++
Sbjct: 237 LHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVR 296
Query: 241 AYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDAL 288
AY P R V+ DR AL LL +ML +PS RISA AL
Sbjct: 297 AYIQSLPPRQ-PVPWETVYPGADRQALSLLGRMLRFEPSARISAAAAL 343
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/307 (35%), Positives = 158/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 38 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 94
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 95 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L A Y
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNAMHYN 201
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 321
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 322 PYDQSFE 328
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 158/284 (55%), Gaps = 21/284 (7%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KKI E + + +REIKIL +HEN+I + +I+ +P E+
Sbjct: 53 VAIKKIS-PFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQ-----------M 100
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V + M+ DL L L + I ++ Q+L GL Y H VLHRD+K SNLL
Sbjct: 101 KDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL 158
Query: 140 IDNEGNLKLADFGLARSFSYDHNNT--LTNRVITLWYRPPELLLGATKYGPAVDMWSVGC 197
++ +LK+ DFGLAR DH++T LT V T WYR PE++L + Y ++D+WSVGC
Sbjct: 159 LNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 218
Query: 198 IFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRV-- 255
I AE+L+ +PI PGK+ +QL+ I + GSP + + A N+ S K +V
Sbjct: 219 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKARNYLL-SLPHKNKVPW 277
Query: 256 REVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+F + D AL+LL+KML +P +RI + AL Y + DP
Sbjct: 278 NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYDP 321
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 57 VCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 113
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 114 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 164
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 165 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 220
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 221 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 280
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 281 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 340
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 341 PYDQSFE 347
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 58 VCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 114
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 115 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 165
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 221
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 222 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 281
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 282 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 341
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 342 PYDQSFE 348
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 34 VCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 90
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 91 SLEEFND-------VYLVTHLMGADLNNIV--KCAKLTDDHVQFLIYQILRGLKYIHSAD 141
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 197
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 198 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 257
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 258 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 317
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 318 PYDQSFE 324
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 44 VCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 100
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 101 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 151
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 208 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 267
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 268 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 327
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 328 PYDQSFE 334
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 40 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 96
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 97 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 147
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 148 IIHRDLKPSNLAVNEDSELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 203
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 204 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 263
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 264 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 323
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 324 PYDQSFE 330
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 110/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 38 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 94
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + L T ++ + Q+L GL Y H
Sbjct: 95 SLEEFND-------VYLVTHLMGADLNNIVKXQKL--TDDHVQFLIYQILRGLKYIHSAD 145
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 146 IIHRDLKPSNLAVNEDXELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 321
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 322 PYDQSFE 328
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 44 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 100
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 101 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 151
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 152 IIHRDLKPSNLAVNEDSELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 208 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 267
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 268 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 327
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 328 PYDQSFE 334
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 48 VCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 104
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 105 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 155
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 156 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 211
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 212 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 271
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 272 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 331
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 332 PYDQSFE 338
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 50 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 106
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 107 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 157
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 213
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 214 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 273
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 274 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 333
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 334 PYDQSFE 340
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 50 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 106
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 107 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 157
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 213
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 214 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 273
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 274 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 333
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 334 PYDQSFE 340
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 38 VCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 94
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 95 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 262 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 321
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 322 PYDQSFE 328
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 50 VCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 106
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 107 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 157
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 213
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 214 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 273
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 274 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 333
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 334 PYDQSFE 340
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 34 VCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 90
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 91 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 141
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 197
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 198 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 257
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 258 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 317
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 318 PYDQSFE 324
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 58 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 114
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 115 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 165
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 221
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 222 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 281
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 282 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 341
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 342 PYDQSFE 348
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 110/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 38 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 94
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + L T ++ + Q+L GL Y H
Sbjct: 95 SLEEFND-------VYLVTHLMGADLNNIVKXQKL--TDDHVQFLIYQILRGLKYIHSAD 145
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 321
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 322 PYDQSFE 328
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 167 bits (424), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 49 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 105
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 106 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 156
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 157 IIHRDLKPSNLAVNEDXELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 212
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 213 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 272
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 273 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 332
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 333 PYDQSFE 339
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 167 bits (424), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 57 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 113
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 114 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 164
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 165 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 220
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 221 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 280
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 281 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 340
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 341 PYDQSFE 347
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 167 bits (424), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 61 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 117
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 118 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 168
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 169 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 224
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 225 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 284
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 285 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 344
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 345 PYDQSFE 351
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 44 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 100
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 101 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 151
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 208 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 267
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 268 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 327
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 328 PYDQSFE 334
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/287 (35%), Positives = 158/287 (55%), Gaps = 18/287 (6%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + ++GE VA+KK+ + E F A RE+ +LK +QHENVI L ++ T R
Sbjct: 40 VCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLR 99
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
N Y Y+V +M DL + GL+F+ +I+ + Q+L GL Y H
Sbjct: 100 --------NFY--DFYLVMPFMQTDLQKIM---GLKFSEEKIQYLVYQMLKGLKYIHSAG 146
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
V+HRD+K NL ++ + LK+ DFGLAR + +T V+T WYR PE++L Y
Sbjct: 147 VVHRDLKPGNLAVNEDCELKILDFGLARH----ADAEMTGYVVTRWYRAPEVILSWMHYN 202
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AE+L GK + GK+ +QL++I ++ G P ++ A ++ +
Sbjct: 203 QTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQS 262
Query: 248 S-RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
+T ++ ++F A +LLEKML LD +R++A AL +F
Sbjct: 263 LPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 309
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 49 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 105
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 106 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 156
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 157 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 212
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 213 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 272
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 273 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 332
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 333 PYDQSFE 339
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 40 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 96
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 97 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 147
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 203
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 204 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 263
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 264 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 323
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 324 PYDQSFE 330
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 36 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 92
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 93 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 143
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 144 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 199
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 200 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 259
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 260 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 319
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 320 PYDQSFE 326
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 43 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 99
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 100 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 150
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 151 IIHRDLKPSNLAVNEDXELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 206
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 207 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 266
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 267 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 326
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 327 PYDQSFE 333
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 40 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 96
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 97 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 147
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 203
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 204 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 263
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 264 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 323
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 324 PYDQSFE 330
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 38 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 94
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 95 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGXVATRWYRAPEIMLNWMHYN 201
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 321
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 322 PYDQSFE 328
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 38 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 94
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 95 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 321
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 322 PYDQSFE 328
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 43 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 99
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 100 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 150
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 151 IIHRDLKPSNLAVNEDXELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 206
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 207 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 266
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 267 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 326
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 327 PYDQSFE 333
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 34 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 90
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 91 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 141
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 197
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 198 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 257
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 258 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 317
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 318 PYDQSFE 324
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 45 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 101
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 102 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 152
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 208
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 209 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 268
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 269 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 328
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 329 PYDQSFE 335
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 170/312 (54%), Gaps = 27/312 (8%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V + ++K+G +A+KK+ + RE+++LK ++HENVI L ++ T P
Sbjct: 67 VCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT-PATSL 125
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+E Y+V M DL + L T ++ + Q+L GL Y H
Sbjct: 126 EE---------FNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLKYIHSAD 174
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 175 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 230
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY---NH 244
VD+WSVGCI AELL G+ + PG + QL +I L G+P ++ +S+MP++ N+
Sbjct: 231 MTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASV---ISRMPSHEARNY 287
Query: 245 FKPSRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLPCD 301
M KR +VF + A++LLEKML+LD +RI+A +AL YF + DP +
Sbjct: 288 INSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQYHDP-DDE 346
Query: 302 PKSLPKYESSHE 313
P+S P Y+ S E
Sbjct: 347 PESEP-YDQSFE 357
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 44 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 100
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 101 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 151
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 208 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 267
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 268 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 327
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 328 PYDQSFE 334
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 40 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 96
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 97 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 147
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 203
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 204 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 263
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 264 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 323
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 324 PYDQSFE 330
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 35 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 91
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 92 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 142
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 143 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 198
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 199 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 258
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 259 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 318
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 319 PYDQSFE 325
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 38 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 94
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 95 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 321
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 322 PYDQSFE 328
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 45 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 101
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 102 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 152
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR + + +T V T WYR PE++L Y
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARHTA----DEMTGYVATRWYRAPEIMLNWMHYN 208
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 209 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 268
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 269 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 328
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 329 PYDQSFE 335
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 38 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 94
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 95 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 321
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 322 PYDQSFE 328
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 45 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 101
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 102 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 152
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR + + +T V T WYR PE++L Y
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARHTA----DEMTGYVATRWYRAPEIMLNWMHYN 208
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 209 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 268
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 269 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 328
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 329 PYDQSSE 335
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 43 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 99
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 100 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 150
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 151 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 206
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 207 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 266
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 267 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 326
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 327 PYDQSFE 333
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 37 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 93
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 94 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 144
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 145 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 200
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 201 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 260
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 261 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 320
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 321 PYDQSFE 327
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 156/307 (50%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 58 VCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 114
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 115 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 165
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ + V T WYR PE++L Y
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMXGXVATRWYRAPEIMLNWMHYN 221
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 222 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 281
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 282 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 341
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 342 PYDQSFE 348
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 43 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 99
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 100 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 150
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 151 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 206
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 207 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 266
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 267 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 326
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 327 PYDQSFE 333
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 35 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 91
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 92 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 142
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 143 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 198
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 199 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 258
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 259 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 318
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 319 PYDQSFE 325
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 156/307 (50%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 38 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 94
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + L T ++ + Q+L GL Y H
Sbjct: 95 SLEEFND-------VYLVTHLMGADLNNIVKSQKL--TDDHVQFLIYQILRGLKYIHSAD 145
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGL R ++ +T V T WYR PE++L Y
Sbjct: 146 IIHRDLKPSNLAVNEDSELKILDFGLCRH----TDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 321
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 322 PYDQSLE 328
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 157/287 (54%), Gaps = 18/287 (6%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + ++GE VA+KK+ + E F A RE+ +LK +QHENVI L ++ T R
Sbjct: 58 VCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLR 117
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
N Y Y+V +M DL + G+ F+ +I+ + Q+L GL Y H
Sbjct: 118 --------NFY--DFYLVMPFMQTDLQKIM---GMEFSEEKIQYLVYQMLKGLKYIHSAG 164
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
V+HRD+K NL ++ + LK+ DFGLAR + +T V+T WYR PE++L Y
Sbjct: 165 VVHRDLKPGNLAVNEDCELKILDFGLARH----ADAEMTGYVVTRWYRAPEVILSWMHYN 220
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AE+L GK + GK+ +QL++I ++ G P ++ A ++ +
Sbjct: 221 QTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQS 280
Query: 248 S-RTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
+T ++ ++F A +LLEKML LD +R++A AL +F
Sbjct: 281 LPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 327
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 45 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 101
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 102 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 152
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR + + +T V T WYR PE++L Y
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARHTA----DEMTGYVATRWYRAPEIMLNWMHYN 208
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 209 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 268
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 269 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 328
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 329 PYDQSLE 335
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 151/287 (52%), Gaps = 17/287 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 38 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 94
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 95 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
M K VF + A++LLEKML+LD +RI+A AL YF
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 151/287 (52%), Gaps = 17/287 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 38 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 94
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 95 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
M K VF + A++LLEKML+LD +RI+A AL YF
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 151/287 (52%), Gaps = 17/287 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 38 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 94
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 95 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
M K VF + A++LLEKML+LD +RI+A AL YF
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 151/287 (52%), Gaps = 17/287 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 38 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 94
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 95 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ +T V T WYR PE++L Y
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
M K VF + A++LLEKML+LD +RI+A AL YF
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 156/307 (50%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 61 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 117
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 118 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 168
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ + V T WYR PE++L Y
Sbjct: 169 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMXGYVATRWYRAPEIMLNWMHYN 224
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 225 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 284
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 285 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 344
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 345 PYDQSFE 351
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 38 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 94
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 95 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ D+GLAR ++ +T V T WYR PE++L Y
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDYGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 321
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 322 PYDQSFE 328
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 156/307 (50%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 38 VCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 94
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 95 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ + V T WYR PE++L Y
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMAGFVATRWYRAPEIMLNWMHYN 201
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 321
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 322 PYDQSFE 328
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 156/307 (50%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 34 VCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 90
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 91 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 141
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ + V T WYR PE++L Y
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMAGFVATRWYRAPEIMLNWMHYN 197
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 198 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 257
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 258 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 317
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 318 PYDQSFE 324
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 156/307 (50%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 38 VCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 94
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 95 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DFGLAR ++ + V T WYR PE++L Y
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMAGFVATRWYRAPEIMLNWMHYN 201
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 262 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 321
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 322 PYDQSFE 328
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 156/307 (50%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 38 VCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 94
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 95 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ DF LAR ++ +T V T WYR PE++L Y
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFYLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 321
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 322 PYDQSFE 328
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 158/306 (51%), Gaps = 20/306 (6%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + + + VA+KK+ + RE+++LK L+HENVI L ++ T
Sbjct: 44 VCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIE 103
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
D Y+V M DL + L Q Y QLL GL Y H
Sbjct: 104 D----------FSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVY--QLLRGLKYIHSAG 151
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SN+ ++ + L++ DFGLAR + +T V T WYR PE++L Y
Sbjct: 152 IIHRDLKPSNVAVNEDSELRILDFGLARQ----ADEEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL GK + PG + +QL +I E+ G+P + +S A + +
Sbjct: 208 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQS 267
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLPCDPKS 304
M ++ + +FR + A++LL +ML+LD QR+SA +AL YF + DP +P++
Sbjct: 268 LPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDP-EDEPEA 326
Query: 305 LPKYES 310
P ES
Sbjct: 327 EPYDES 332
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 156/307 (50%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 38 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 94
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 95 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ FGLAR ++ +T V T WYR PE++L Y
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILGFGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 321
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 322 PYDQSFE 328
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 156/307 (50%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 38 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 94
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 95 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ D GLAR ++ +T V T WYR PE++L Y
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDAGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 321
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 322 PYDQSFE 328
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 156/307 (50%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 38 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 94
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 95 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ D GLAR ++ +T V T WYR PE++L Y
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDRGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 321
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 322 PYDQSFE 328
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 158/306 (51%), Gaps = 20/306 (6%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + + + VA+KK+ + RE+++LK L+HENVI L ++ T
Sbjct: 44 VCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIE 103
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
D Y+V M DL + L Q Y QLL GL Y H
Sbjct: 104 D----------FSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVY--QLLRGLKYIHSAG 151
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SN+ ++ + L++ DFGLAR + +T V T WYR PE++L Y
Sbjct: 152 IIHRDLKPSNVAVNEDSELRILDFGLARQ----ADEEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL GK + PG + +QL +I E+ G+P + +S A + +
Sbjct: 208 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQS 267
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLPCDPKS 304
M ++ + +FR + A++LL +ML+LD QR+SA +AL YF + DP +P++
Sbjct: 268 LPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDP-EDEPEA 326
Query: 305 LPKYES 310
P ES
Sbjct: 327 EPYDES 332
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 156/307 (50%), Gaps = 17/307 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + KTG VA+KK+ + RE+++LK ++HENVI L ++ T P R
Sbjct: 38 VCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT---PAR 94
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V M DL + + T ++ + Q+L GL Y H
Sbjct: 95 SLEEFND-------VYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SNL ++ + LK+ D GLAR ++ +T V T WYR PE++L Y
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDGGLARH----TDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL G+ + PG + +QL I L G+P + +S A N+ +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLP 306
M K VF + A++LLEKML+LD +RI+A AL YF P D
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 321
Query: 307 KYESSHE 313
Y+ S E
Sbjct: 322 PYDQSFE 328
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 154/291 (52%), Gaps = 25/291 (8%)
Query: 16 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDG 75
TGEIVA+KKI +K F + +REIKILK +HEN+I + I RPD
Sbjct: 35 TGEIVAIKKIE-PFDKPLFALRTLREIKILKHFKHENIITIFNI-----------QRPDS 82
Query: 76 NKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKG 135
+ Y++ E M DL + L + I+ ++ Q L + H + V+HRD+K
Sbjct: 83 FENFNEVYIIQELMQTDLHRVISTQML--SDDHIQYFIYQTLRAVKVLHGSNVIHRDLKP 140
Query: 136 SNLLIDNEGNLKLADFGLARSFSYDHNNT---------LTNRVITLWYRPPELLLGATKY 186
SNLLI++ +LK+ DFGLAR + +T V T WYR PE++L + KY
Sbjct: 141 SNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKY 200
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
A+D+WS GCI AEL +PI PG++ QL IF + G+P + P +
Sbjct: 201 SRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYI 260
Query: 247 PSRTM--KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT 295
S M + ++F + ++LL++ML+ DP++RI+AK+AL+ Y T
Sbjct: 261 KSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQT 311
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 154/291 (52%), Gaps = 25/291 (8%)
Query: 16 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDG 75
TGEIVA+KKI +K F + +REIKILK +HEN+I + I RPD
Sbjct: 35 TGEIVAIKKIE-PFDKPLFALRTLREIKILKHFKHENIITIFNI-----------QRPDS 82
Query: 76 NKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKG 135
+ Y++ E M DL + L + I+ ++ Q L + H + V+HRD+K
Sbjct: 83 FENFNEVYIIQELMQTDLHRVISTQML--SDDHIQYFIYQTLRAVKVLHGSNVIHRDLKP 140
Query: 136 SNLLIDNEGNLKLADFGLARSFSYDHNNT---------LTNRVITLWYRPPELLLGATKY 186
SNLLI++ +LK+ DFGLAR + +T V T WYR PE++L + KY
Sbjct: 141 SNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKY 200
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
A+D+WS GCI AEL +PI PG++ QL IF + G+P + P +
Sbjct: 201 SRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYI 260
Query: 247 PSRTM--KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT 295
S M + ++F + ++LL++ML+ DP++RI+AK+AL+ Y T
Sbjct: 261 KSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQT 311
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 158/306 (51%), Gaps = 20/306 (6%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + + + VA+KK+ + RE+++LK L+HENVI L ++ T
Sbjct: 36 VCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIE 95
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
D Y+V M DL + L Q Y QLL GL Y H
Sbjct: 96 D----------FSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVY--QLLRGLKYIHSAG 143
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SN+ ++ + L++ DFGLAR + +T V T WYR PE++L Y
Sbjct: 144 IIHRDLKPSNVAVNEDCELRILDFGLARQ----ADEEMTGYVATRWYRAPEIMLNWMHYN 199
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
VD+WSVGCI AELL GK + PG + +QL +I E+ G+P + +S A + +
Sbjct: 200 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQS 259
Query: 248 SRTM-KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDPLPCDPKS 304
M ++ + +FR + A++LL +ML+LD QR+SA +AL YF + DP +P++
Sbjct: 260 LPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDP-EDEPEA 318
Query: 305 LPKYES 310
P ES
Sbjct: 319 EPYDES 324
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 108/300 (36%), Positives = 161/300 (53%), Gaps = 15/300 (5%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE- 66
VF A + + VA+KKI + + + A+REIKI+++L H+N++K+ EI+ G +
Sbjct: 27 VFSAVDNDCDKRVAIKKIVLTDPQS--VKHALREIKIIRRLDHDNIVKVFEILGPSGSQL 84
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADR-PGLRFTVPQIKCYMKQLLTGLHYCHV 125
D+ G S Y+V EYM+ DL + ++ P L + +M QLL GL Y H
Sbjct: 85 TDDVG---SLTELNSVYIVQEYMETDLANVLEQGPLLE---EHARLFMYQLLRGLKYIHS 138
Query: 126 NQVLHRDIKGSNLLIDNEG-NLKLADFGLARSFS--YDHNNTLTNRVITLWYRPPELLLG 182
VLHRD+K +NL I+ E LK+ DFGLAR Y H L+ ++T WYR P LLL
Sbjct: 139 ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLS 198
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFE-LCGSPDETIWPGVSKMPA 241
Y A+DMW+ GCIFAE+L GK + G +E EQ+ I E + +E +S +P
Sbjct: 199 PNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPV 258
Query: 242 YNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCD 301
Y + K + ++ R A++ LE++L P R++A++AL Y P D
Sbjct: 259 YIRNDMTEPHK-PLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSFPMD 317
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 157/300 (52%), Gaps = 17/300 (5%)
Query: 15 KTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPD 74
+TG VA+KK+ + E F A RE+++LK ++HENVI L ++ T ++ D
Sbjct: 48 RTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTP------DETLDD 101
Query: 75 GNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIK 134
+ Y+V +M DL L L Q Y Q+L GL Y H ++HRD+K
Sbjct: 102 FTDF----YLVMPFMGTDLGKLMKHEKLGEDRIQFLVY--QMLKGLRYIHAAGIIHRDLK 155
Query: 135 GSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWS 194
NL ++ + LK+ DFGLAR ++ + V+T WYR PE++L +Y VD+WS
Sbjct: 156 PGNLAVNEDCELKILDFGLARQ----ADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWS 211
Query: 195 VGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTM-KR 253
VGCI AE++ GK + G + +QL +I ++ G+P + A N+ K + K+
Sbjct: 212 VGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKK 271
Query: 254 RVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLPKYESSHE 313
+ + A+ LLEKML+LD QR++A +AL YF + D + KY+ S +
Sbjct: 272 DFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDEPQVQKYDDSFD 331
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 153/291 (52%), Gaps = 25/291 (8%)
Query: 16 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDG 75
TGEIVA+KKI +K F + +REIKILK +HEN+I + I RPD
Sbjct: 35 TGEIVAIKKIE-PFDKPLFALRTLREIKILKHFKHENIITIFNI-----------QRPDS 82
Query: 76 NKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKG 135
+ Y++ E M DL + L + I+ ++ Q L + H + V+HRD+K
Sbjct: 83 FENFNEVYIIQELMQTDLHRVISTQML--SDDHIQYFIYQTLRAVKVLHGSNVIHRDLKP 140
Query: 136 SNLLIDNEGNLKLADFGLARSFSYDHNNT---------LTNRVITLWYRPPELLLGATKY 186
SNLLI++ +LK+ DFGLAR + + V T WYR PE++L + KY
Sbjct: 141 SNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKY 200
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
A+D+WS GCI AEL +PI PG++ QL IF + G+P + P +
Sbjct: 201 SRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYI 260
Query: 247 PSRTM--KRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT 295
S M + ++F + ++LL++ML+ DP++RI+AK+AL+ Y T
Sbjct: 261 KSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQT 311
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 156/300 (52%), Gaps = 38/300 (12%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V R TG IVA+KK ++ + A+REIK+LK+L+HEN++ L E+
Sbjct: 41 VMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVC------- 93
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHD-LTGLADRP-GLRFTVPQIKCYMKQLLTGLHYCHV 125
K + Y+VFE++DH L L P GL + V Q Y+ Q++ G+ +CH
Sbjct: 94 ---------KKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQK--YLFQIINGIGFCHS 142
Query: 126 NQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATK 185
+ ++HRDIK N+L+ G +KL DFG AR+ + + V T WYR PELL+G K
Sbjct: 143 HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP-GEVYDDEVATRWYRAPELLVGDVK 201
Query: 186 YGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSP---------DETIWPGV 236
YG AVD+W++GC+ E+ G+P+ PG ++ +QL I G+ ++ GV
Sbjct: 202 YGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGV 261
Query: 237 SKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD 296
++P +P ++ EV ++L +K L +DP +R + L ++F D
Sbjct: 262 -RLPEIKEREPLERRYPKLSEV-------VIDLAKKCLHIDPDKRPFCAELLHHDFFQMD 313
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 159/312 (50%), Gaps = 54/312 (17%)
Query: 15 KTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQ-HENVIKLKEIVTSPGPERDEQGRP 73
+TGE+VA+KKI + REI IL +L HEN++ L ++ R
Sbjct: 32 RTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVL-----------RA 80
Query: 74 DGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDI 133
D ++ Y+VF+YM+ DL + L Q Y QL+ + Y H +LHRD+
Sbjct: 81 DNDR---DVYLVFDYMETDLHAVIRANILEPVHKQYVVY--QLIKVIKYLHSGGLLHRDM 135
Query: 134 KGSNLLIDNEGNLKLADFGLARSF-------------------SYDHNN-TLTNRVITLW 173
K SN+L++ E ++K+ADFGL+RSF ++D + LT+ V T W
Sbjct: 136 KPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRW 195
Query: 174 YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPD---- 229
YR PE+LLG+TKY +DMWS+GCI E+L GKPI PG + QL +I + P
Sbjct: 196 YRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDV 255
Query: 230 ETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHF-------------DRHALELLEKMLML 276
E+I +K + + + R++F + + AL+LL+K+L
Sbjct: 256 ESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQF 315
Query: 277 DPSQRISAKDAL 288
+P++RISA DAL
Sbjct: 316 NPNKRISANDAL 327
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 155/293 (52%), Gaps = 30/293 (10%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
VF R TG+IVA+KK + A+REI++LK+L+H N++ L E+
Sbjct: 19 VFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVF------- 71
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQ--IKCYMKQLLTGLHYCHV 125
+ + ++VFEY DH + DR + VP+ +K Q L +++CH
Sbjct: 72 ---------RRKRRLHLVFEYCDHTVLHELDR--YQRGVPEHLVKSITWQTLQAVNFCHK 120
Query: 126 NQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATK 185
+ +HRD+K N+LI +KL DFG AR + ++ + V T WYR PELL+G T+
Sbjct: 121 HNCIHRDVKPENILITKHSVIKLCDFGFARLLT-GPSDYYDDEVATRWYRSPELLVGDTQ 179
Query: 186 YGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHF 245
YGP VD+W++GC+FAELL+G P+ PGK++ +QL I + G + P ++ + N +
Sbjct: 180 YGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGD----LIPRHQQVFSTNQY 235
Query: 246 -----KPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
P + F + AL LL+ L +DP++R++ + L YF
Sbjct: 236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYF 288
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 27/292 (9%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ A+ +GE+VA+KK+ D + RE++I++KL H N+++L+ S G ++
Sbjct: 115 VYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYFFYSSGEKK 168
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLA---DRPGLRFTVPQIKCYMKQLLTGLHYCH 124
DE +V +Y+ + +A R V +K YM QL L Y H
Sbjct: 169 DEV----------YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 218
Query: 125 VNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
+ HRDIK NLL+D + LKL DFG A+ N + + + +YR PEL+ GA
Sbjct: 219 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFGA 276
Query: 184 TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM-PAY 242
T Y ++D+WS GC+ AELL G+PI PG + +QL +I ++ G+P + +M P Y
Sbjct: 277 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE---QIREMNPNY 333
Query: 243 NHFKPSRTMKRRVREVFR-HFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
FK + +VFR A+ L ++L P+ R++ +A +F
Sbjct: 334 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 385
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 27/292 (9%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ A+ +GE+VA+KK+ D + RE++I++KL H N+++L+ S G ++
Sbjct: 70 VYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYFFYSSGEKK 123
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLA---DRPGLRFTVPQIKCYMKQLLTGLHYCH 124
DE +V +Y+ + +A R V +K YM QL L Y H
Sbjct: 124 DEV----------YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 125 VNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
+ HRDIK NLL+D + LKL DFG A+ N + + + +YR PEL+ GA
Sbjct: 174 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYYRAPELIFGA 231
Query: 184 TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM-PAY 242
T Y ++D+WS GC+ AELL G+PI PG + +QL +I ++ G+P + +M P Y
Sbjct: 232 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE---QIREMNPNY 288
Query: 243 NHFKPSRTMKRRVREVFR-HFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
FK + +VFR A+ L ++L P+ R++ +A +F
Sbjct: 289 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 340
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 27/292 (9%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ A+ +GE+VA+KK+ D + RE++I++KL H N+++L+ S G ++
Sbjct: 74 VYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYFFYSSGEKK 127
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLA---DRPGLRFTVPQIKCYMKQLLTGLHYCH 124
DE +V +Y+ + +A R V +K YM QL L Y H
Sbjct: 128 DEV----------YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 177
Query: 125 VNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
+ HRDIK NLL+D + LKL DFG A+ N + + + +YR PEL+ GA
Sbjct: 178 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFGA 235
Query: 184 TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM-PAY 242
T Y ++D+WS GC+ AELL G+PI PG + +QL +I ++ G+P + +M P Y
Sbjct: 236 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE---QIREMNPNY 292
Query: 243 NHFKPSRTMKRRVREVFR-HFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
FK + +VFR A+ L ++L P+ R++ +A +F
Sbjct: 293 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 344
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 27/292 (9%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ A+ +GE+VA+KK+ D + RE++I++KL H N+++L+ S G ++
Sbjct: 72 VYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYFFYSSGEKK 125
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLA---DRPGLRFTVPQIKCYMKQLLTGLHYCH 124
DE +V +Y+ + +A R V +K YM QL L Y H
Sbjct: 126 DEV----------YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 175
Query: 125 VNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
+ HRDIK NLL+D + LKL DFG A+ N + + + +YR PEL+ GA
Sbjct: 176 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFGA 233
Query: 184 TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM-PAY 242
T Y ++D+WS GC+ AELL G+PI PG + +QL +I ++ G+P + +M P Y
Sbjct: 234 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE---QIREMNPNY 290
Query: 243 NHFKPSRTMKRRVREVFR-HFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
FK + +VFR A+ L ++L P+ R++ +A +F
Sbjct: 291 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 342
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 27/292 (9%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ A+ +GE+VA+KK+ D + RE++I++KL H N+++L+ S G ++
Sbjct: 70 VYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYFFYSSGEKK 123
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLA---DRPGLRFTVPQIKCYMKQLLTGLHYCH 124
DE +V +Y+ + +A R V +K YM QL L Y H
Sbjct: 124 DEV----------YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 125 VNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
+ HRDIK NLL+D + LKL DFG A+ N + + + +YR PEL+ GA
Sbjct: 174 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFGA 231
Query: 184 TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM-PAY 242
T Y ++D+WS GC+ AELL G+PI PG + +QL +I ++ G+P + +M P Y
Sbjct: 232 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE---QIREMNPNY 288
Query: 243 NHFKPSRTMKRRVREVFR-HFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
FK + +VFR A+ L ++L P+ R++ +A +F
Sbjct: 289 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 340
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 27/292 (9%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ A+ +GE+VA+KK+ D + RE++I++KL H N+++L+ S G ++
Sbjct: 64 VYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYFFYSSGEKK 117
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLA---DRPGLRFTVPQIKCYMKQLLTGLHYCH 124
DE +V +Y+ + +A R V +K YM QL L Y H
Sbjct: 118 DEV----------YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 167
Query: 125 VNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
+ HRDIK NLL+D + LKL DFG A+ N + + + +YR PEL+ GA
Sbjct: 168 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFGA 225
Query: 184 TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM-PAY 242
T Y ++D+WS GC+ AELL G+PI PG + +QL +I ++ G+P + +M P Y
Sbjct: 226 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE---QIREMNPNY 282
Query: 243 NHFKPSRTMKRRVREVFR-HFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
FK + +VFR A+ L ++L P+ R++ +A +F
Sbjct: 283 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 334
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 27/292 (9%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ A+ +GE+VA+KK+ D + RE++I++KL H N+++L+ S G ++
Sbjct: 41 VYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYFFYSSGEKK 94
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLA---DRPGLRFTVPQIKCYMKQLLTGLHYCH 124
DE +V +Y+ + +A R V +K YM QL L Y H
Sbjct: 95 DEV----------YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 144
Query: 125 VNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
+ HRDIK NLL+D + LKL DFG A+ N + + + +YR PEL+ GA
Sbjct: 145 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFGA 202
Query: 184 TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM-PAY 242
T Y ++D+WS GC+ AELL G+PI PG + +QL +I ++ G+P + +M P Y
Sbjct: 203 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE---QIREMNPNY 259
Query: 243 NHFKPSRTMKRRVREVFR-HFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
FK + +VFR A+ L ++L P+ R++ +A +F
Sbjct: 260 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 311
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 27/292 (9%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ A+ +GE+VA+KK+ D + RE++I++KL H N+++L+ S G ++
Sbjct: 48 VYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYFFYSSGEKK 101
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLA---DRPGLRFTVPQIKCYMKQLLTGLHYCH 124
DE +V +Y+ + +A R V +K YM QL L Y H
Sbjct: 102 DEV----------YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 125 VNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
+ HRDIK NLL+D + LKL DFG A+ N + + + +YR PEL+ GA
Sbjct: 152 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYYRAPELIFGA 209
Query: 184 TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM-PAY 242
T Y ++D+WS GC+ AELL G+PI PG + +QL +I ++ G+P + +M P Y
Sbjct: 210 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE---QIREMNPNY 266
Query: 243 NHFKPSRTMKRRVREVFR-HFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
FK + +VFR A+ L ++L P+ R++ +A +F
Sbjct: 267 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 318
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 27/292 (9%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ A+ +GE+VA+KK+ D + RE++I++KL H N+++L+ S G ++
Sbjct: 44 VYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYFFYSSGEKK 97
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLA---DRPGLRFTVPQIKCYMKQLLTGLHYCH 124
DE +V +Y+ + +A R V +K YM QL L Y H
Sbjct: 98 DEV----------YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 147
Query: 125 VNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
+ HRDIK NLL+D + LKL DFG A+ N + + + +YR PEL+ GA
Sbjct: 148 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYYRAPELIFGA 205
Query: 184 TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM-PAY 242
T Y ++D+WS GC+ AELL G+PI PG + +QL +I ++ G+P + +M P Y
Sbjct: 206 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE---QIREMNPNY 262
Query: 243 NHFKPSRTMKRRVREVFR-HFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
FK + +VFR A+ L ++L P+ R++ +A +F
Sbjct: 263 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 314
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 27/292 (9%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ A+ +GE+VA+KK+ D + RE++I++KL H N+++L+ S G ++
Sbjct: 55 VYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYFFYSSGEKK 108
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLA---DRPGLRFTVPQIKCYMKQLLTGLHYCH 124
DE +V +Y+ + +A R V +K YM QL L Y H
Sbjct: 109 DEV----------YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 158
Query: 125 VNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
+ HRDIK NLL+D + LKL DFG A+ N + + + +YR PEL+ GA
Sbjct: 159 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYYRAPELIFGA 216
Query: 184 TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM-PAY 242
T Y ++D+WS GC+ AELL G+PI PG + +QL +I ++ G+P + +M P Y
Sbjct: 217 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE---QIREMNPNY 273
Query: 243 NHFKPSRTMKRRVREVFR-HFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
FK + +VFR A+ L ++L P+ R++ +A +F
Sbjct: 274 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 325
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 27/292 (9%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ A+ +GE+VA+KK+ D + RE++I++KL H N+++L+ S G ++
Sbjct: 48 VYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYFFYSSGEKK 101
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLA---DRPGLRFTVPQIKCYMKQLLTGLHYCH 124
DE +V +Y+ + +A R V +K YM QL L Y H
Sbjct: 102 DEV----------YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 125 VNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
+ HRDIK NLL+D + LKL DFG A+ N + + + +YR PEL+ GA
Sbjct: 152 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYYRAPELIFGA 209
Query: 184 TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM-PAY 242
T Y ++D+WS GC+ AELL G+PI PG + +QL +I ++ G+P + +M P Y
Sbjct: 210 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE---QIREMNPNY 266
Query: 243 NHFKPSRTMKRRVREVFR-HFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
FK + +VFR A+ L ++L P+ R++ +A +F
Sbjct: 267 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 318
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 27/292 (9%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ A+ +GE+VA+KK+ D + RE++I++KL H N+++L+ S G ++
Sbjct: 40 VYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYFFYSSGEKK 93
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLA---DRPGLRFTVPQIKCYMKQLLTGLHYCH 124
DE +V +Y+ + +A R V +K YM QL L Y H
Sbjct: 94 DEV----------YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 143
Query: 125 VNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
+ HRDIK NLL+D + LKL DFG A+ N + + + +YR PEL+ GA
Sbjct: 144 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYYRAPELIFGA 201
Query: 184 TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM-PAY 242
T Y ++D+WS GC+ AELL G+PI PG + +QL +I ++ G+P + +M P Y
Sbjct: 202 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE---QIREMNPNY 258
Query: 243 NHFKPSRTMKRRVREVFR-HFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
FK + +VFR A+ L ++L P+ R++ +A +F
Sbjct: 259 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 310
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 27/292 (9%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ A+ +GE+VA+KK+ D + RE++I++KL H N+++L+ S G ++
Sbjct: 49 VYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYFFYSSGEKK 102
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLA---DRPGLRFTVPQIKCYMKQLLTGLHYCH 124
DE +V +Y+ + +A R V +K YM QL L Y H
Sbjct: 103 DEV----------YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 152
Query: 125 VNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
+ HRDIK NLL+D + LKL DFG A+ N + + + +YR PEL+ GA
Sbjct: 153 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFGA 210
Query: 184 TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM-PAY 242
T Y ++D+WS GC+ AELL G+PI PG + +QL +I ++ G+P + +M P Y
Sbjct: 211 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE---QIREMNPNY 267
Query: 243 NHFKPSRTMKRRVREVFR-HFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
FK + +VFR A+ L ++L P+ R++ +A +F
Sbjct: 268 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 319
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 27/292 (9%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ A+ +GE+VA+KK+ D + RE++I++KL H N+++L+ S G ++
Sbjct: 36 VYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYFFYSSGEKK 89
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLA---DRPGLRFTVPQIKCYMKQLLTGLHYCH 124
DE +V +Y+ + +A R V +K YM QL L Y H
Sbjct: 90 DEV----------YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 125 VNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
+ HRDIK NLL+D + LKL DFG A+ N + + + +YR PEL+ GA
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYYRAPELIFGA 197
Query: 184 TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM-PAY 242
T Y ++D+WS GC+ AELL G+PI PG + +QL +I ++ G+P + +M P Y
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE---QIREMNPNY 254
Query: 243 NHFKPSRTMKRRVREVFR-HFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
FK + +VFR A+ L ++L P+ R++ +A +F
Sbjct: 255 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 27/292 (9%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ A+ +GE+VA+KK+ D + RE++I++KL H N+++L+ S G ++
Sbjct: 37 VYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYFFYSSGEKK 90
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLA---DRPGLRFTVPQIKCYMKQLLTGLHYCH 124
DE +V +Y+ + +A R V +K YM QL L Y H
Sbjct: 91 DEV----------YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 140
Query: 125 VNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
+ HRDIK NLL+D + LKL DFG A+ N + + + +YR PEL+ GA
Sbjct: 141 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYYRAPELIFGA 198
Query: 184 TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM-PAY 242
T Y ++D+WS GC+ AELL G+PI PG + +QL +I ++ G+P + +M P Y
Sbjct: 199 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE---QIREMNPNY 255
Query: 243 NHFKPSRTMKRRVREVFR-HFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
FK + +VFR A+ L ++L P+ R++ +A +F
Sbjct: 256 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 307
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 27/292 (9%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ A+ +GE+VA+KK+ D + RE++I++KL H N+++L+ S G ++
Sbjct: 36 VYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYFFYSSGEKK 89
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLA---DRPGLRFTVPQIKCYMKQLLTGLHYCH 124
DE +V +Y+ + +A R V +K YM QL L Y H
Sbjct: 90 DEV----------YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 125 VNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
+ HRDIK NLL+D + LKL DFG A+ N + + + +YR PEL+ GA
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYYRAPELIFGA 197
Query: 184 TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM-PAY 242
T Y ++D+WS GC+ AELL G+PI PG + +QL +I ++ G+P + +M P Y
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE---QIREMNPNY 254
Query: 243 NHFKPSRTMKRRVREVFR-HFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
FK + +VFR A+ L ++L P+ R++ +A +F
Sbjct: 255 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 27/292 (9%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ A+ +GE+VA+KK+ D + RE++I++KL H N+++L+ S G ++
Sbjct: 36 VYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYFFYSSGEKK 89
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLA---DRPGLRFTVPQIKCYMKQLLTGLHYCH 124
DE +V +Y+ + +A R V +K YM QL L Y H
Sbjct: 90 DEV----------YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 125 VNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
+ HRDIK NLL+D + LKL DFG A+ N + + + +YR PEL+ GA
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFGA 197
Query: 184 TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM-PAY 242
T Y ++D+WS GC+ AELL G+PI PG + +QL +I ++ G+P + +M P Y
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE---QIREMNPNY 254
Query: 243 NHFKPSRTMKRRVREVFR-HFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
FK + +VFR A+ L ++L P+ R++ +A +F
Sbjct: 255 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 148/292 (50%), Gaps = 27/292 (9%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ A+ +GE+VA+KK+ D + RE++I++KL H N+++L+ S G ++
Sbjct: 36 VYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYFFYSSGEKK 89
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLA---DRPGLRFTVPQIKCYMKQLLTGLHYCH 124
D +V +Y+ + +A R V +K YM QL L Y H
Sbjct: 90 DVV----------YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 125 VNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
+ HRDIK NLL+D + LKL DFG A+ N + + + +YR PEL+ GA
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYYRAPELIFGA 197
Query: 184 TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM-PAY 242
T Y ++D+WS GC+ AELL G+PI PG + +QL +I ++ G+P + +M P Y
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE---QIREMNPNY 254
Query: 243 NHFKPSRTMKRRVREVFR-HFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
FK + +VFR A+ L ++L P+ R++ +A +F
Sbjct: 255 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 148/292 (50%), Gaps = 27/292 (9%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ A+ +GE+VA+KK+ + RE++I++KL H N+++L+ S G ++
Sbjct: 36 VYQAKLCDSGELVAIKKVLQGKAFKN------RELQIMRKLDHCNIVRLRYFFYSSGEKK 89
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLA---DRPGLRFTVPQIKCYMKQLLTGLHYCH 124
DE +V +Y+ + +A R V +K YM QL L Y H
Sbjct: 90 DEV----------YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 125 VNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
+ HRDIK NLL+D + LKL DFG A+ N + + + +YR PEL+ GA
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFGA 197
Query: 184 TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM-PAY 242
T Y ++D+WS GC+ AELL G+PI PG + +QL +I ++ G+P + +M P Y
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE---QIREMNPNY 254
Query: 243 NHFKPSRTMKRRVREVFR-HFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
FK + +VFR A+ L ++L P+ R++ +A +F
Sbjct: 255 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 147/292 (50%), Gaps = 27/292 (9%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ A+ +GE+VA+KK+ + RE++I++KL H N+++L+ S G ++
Sbjct: 36 VYQAKLCDSGELVAIKKVLQGKAFKN------RELQIMRKLDHCNIVRLRYFFYSSGEKK 89
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLA---DRPGLRFTVPQIKCYMKQLLTGLHYCH 124
DE +V +Y+ + +A R V +K YM QL L Y H
Sbjct: 90 DEV----------YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 125 VNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
+ HRDIK NLL+D + LKL DFG A+ N + + + +YR PEL+ GA
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFGA 197
Query: 184 TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM-PAY 242
T Y ++D+WS GC+ AELL G+PI PG + +QL +I ++ G+P + +M P Y
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE---QIREMNPNY 254
Query: 243 NHFKPSRTMKRRVREVFR-HFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
F + +VFR A+ L ++L P+ R++ +A +F
Sbjct: 255 TEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 147/292 (50%), Gaps = 27/292 (9%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ A+ +GE+VA+KK+ + RE++I++KL H N+++L+ S G ++
Sbjct: 36 VYQAKLCDSGELVAIKKVLQGKAFKN------RELQIMRKLDHCNIVRLRYFFYSSGEKK 89
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLA---DRPGLRFTVPQIKCYMKQLLTGLHYCH 124
DE +V +Y+ + +A R V +K YM QL L Y H
Sbjct: 90 DEV----------YLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 125 VNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
+ HRDIK NLL+D + LKL DFG A+ N + + + +YR PEL+ GA
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYYRAPELIFGA 197
Query: 184 TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM-PAY 242
T Y ++D+WS GC+ AELL G+PI PG + +QL +I ++ G+P + +M P Y
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE---QIREMNPNY 254
Query: 243 NHFKPSRTMKRRVREVFR-HFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
F + +VFR A+ L ++L P+ R++ +A +F
Sbjct: 255 TEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 154/292 (52%), Gaps = 28/292 (9%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
VF A+ +++ E VA+KK+ D + RE++I++ ++H NV+ LK S G ++
Sbjct: 56 VFQAKLVESDE-VAIKKVLQDKRFKN------RELQIMRIVKHPNVVDLKAFFYSNGDKK 108
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADR--PGLRFTVPQ--IKCYMKQLLTGLHYC 123
DE +V EY+ + A R L+ T+P IK YM QLL L Y
Sbjct: 109 DEV----------FLNLVLEYVPETVYR-ASRHYAKLKQTMPMLLIKLYMYQLLRSLAYI 157
Query: 124 HVNQVLHRDIKGSNLLIDN-EGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLG 182
H + HRDIK NLL+D G LKL DFG A+ N + + + +YR PEL+ G
Sbjct: 158 HSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNV--SXICSRYYRAPELIFG 215
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY 242
AT Y +D+WS GC+ AEL+ G+P+ PG++ +QL +I ++ G+P ++ P Y
Sbjct: 216 ATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMN--PNY 273
Query: 243 NHFKPSRTMKRRVREVFR-HFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
K + +VFR A++L+ ++L PS R++A +AL +F
Sbjct: 274 MEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 150/334 (44%), Gaps = 72/334 (21%)
Query: 19 IVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
+VA+KKI E +REI IL +L H++V+K+ +IV E+ ++
Sbjct: 80 VVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE-------- 131
Query: 79 RGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNL 138
Y+V E D D L P + T IK + LL G+ Y H +LHRD+K +N
Sbjct: 132 ---LYVVLEIADSDFKKLFRTP-VYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANC 187
Query: 139 LIDNEGNLKLADFGLARSFSYDHNNT--------------------------LTNRVITL 172
L++ + ++K+ DFGLAR+ Y N LT V+T
Sbjct: 188 LVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTR 247
Query: 173 WYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK-----------PILPG---------- 211
WYR PEL+L Y A+D+WS+GCIFAELLN P+ PG
Sbjct: 248 WYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQ 307
Query: 212 ----------KNEAEQLSKIFELCGSPDETIWPGVSKMPA--YNHFKPSRTMKRRVREVF 259
+ +QL+ IF + G+P E + K A Y P R + E F
Sbjct: 308 KAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKRE-GTDLAERF 366
Query: 260 RHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
A+ LL++ML+ +P++RI+ + L +F
Sbjct: 367 PASSADAIHLLKRMLVFNPNKRITINECLAHPFF 400
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 155/310 (50%), Gaps = 42/310 (13%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + G VA+KK+ + + A RE+ +LK + H+N+I L + T P++
Sbjct: 38 VCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFT---PQK 94
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V E MD +L + + ++ + Q+L G+ + H
Sbjct: 95 TLEEFQD-------VYLVMELMDANLCQVI---HMELDHERMSYLLYQMLCGIKHLHSAG 144
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SN+++ ++ LK+ DFGLAR+ S N +T V+T +YR PE++LG Y
Sbjct: 145 IIHRDLKPSNIVVKSDCTLKILDFGLARTAS--TNFMMTPYVVTRYYRAPEVILG-MGYK 201
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDE--------TIWPGVSKM 239
VD+WSVGCI EL+ G I G + +Q +K+ E G+P T+ V
Sbjct: 202 ENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENR 261
Query: 240 PAY----------NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD 289
PAY + PS + + +++ A +LL KML++DP +RIS +AL
Sbjct: 262 PAYPGIAFEELFPDWIFPSESERDKIKT------SQARDLLSKMLVIDPDKRISVDEALR 315
Query: 290 SEYF--WTDP 297
Y W DP
Sbjct: 316 HPYITVWYDP 325
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 153/310 (49%), Gaps = 42/310 (13%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V A + G VA+KK+ + + A RE+ +LK + H+N+I L + T P++
Sbjct: 40 VCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFT---PQK 96
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
+ D Y+V E MD +L + + ++ + Q+L G+ + H
Sbjct: 97 TLEEFQD-------VYLVMELMDANLCQVI---HMELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYG 187
++HRD+K SN+++ ++ LK+ DFGLAR+ N +T V+T +YR PE++LG Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAC--TNFMMTPYVVTRYYRAPEVILG-MGYA 203
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDE--------TIWPGVSKM 239
VD+WSVGCI EL+ G I G + +Q +K+ E G+P T+ V
Sbjct: 204 ANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENR 263
Query: 240 PAYNHFK----------PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD 289
P Y K PS + + +++ A +LL KML++DP +RIS +AL
Sbjct: 264 PKYPGIKFEELFPDWIFPSESERDKIKT------SQARDLLSKMLVIDPDKRISVDEALR 317
Query: 290 SEYF--WTDP 297
Y W DP
Sbjct: 318 HPYITVWYDP 327
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 157/337 (46%), Gaps = 64/337 (18%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V++A + T + VA+KK+ E +REI IL +L+ + +I+L +++
Sbjct: 42 VYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLII------ 95
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
PD Y+V E D DL L P + T IK + LL G ++ H +
Sbjct: 96 -----PDDLLKFDELYIVLEIADSDLKKLFKTP-IFLTEEHIKTILYNLLLGENFIHESG 149
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYD-----------------HNNTL----T 166
++HRD+K +N L++ + ++K+ DFGLAR+ + + HN L T
Sbjct: 150 IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLT 209
Query: 167 NRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK-----------PILPG---- 211
+ V+T WYR PEL+L Y ++D+WS GCIFAELLN P+ PG
Sbjct: 210 SHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCF 269
Query: 212 -------------KNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK--PSRTMKRRVR 256
K+ +QL+ IF + G+P E ++K + K P R ++
Sbjct: 270 PLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRK-PINLK 328
Query: 257 EVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
+ + + LLE ML +P++RI+ ALD Y
Sbjct: 329 QKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYL 365
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 158/319 (49%), Gaps = 42/319 (13%)
Query: 2 LVCISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVT 61
+VC +VF +I++G+ ALKK+ D P RE+ I+K L H N+IKL +
Sbjct: 22 IVC--EVF---DIESGKRFALKKVLQD------PRYKNRELDIMKVLDHVNIIKLVDYFY 70
Query: 62 SPGPERDEQGRP--DGNKYRGSTY--------------------MVFEYMD---HDLTGL 96
+ G E + +P D NK G ++ EY+ H +
Sbjct: 71 TTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKS 130
Query: 97 ADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGN-LKLADFGLAR 155
R G + I Y+ QL + + H + HRDIK NLL++++ N LKL DFG A+
Sbjct: 131 FIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAK 190
Query: 156 SFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEA 215
+ + + +YR PEL+LGAT+Y P++D+WS+GC+F EL+ GKP+ G+
Sbjct: 191 KLIPSEPSVAX--ICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSI 248
Query: 216 EQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVF-RHFDRHALELLEKML 274
+QL +I ++ G+P T + P Y + + R++ A++LLE++L
Sbjct: 249 DQLVRIIQIMGTP--TKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQIL 306
Query: 275 MLDPSQRISAKDALDSEYF 293
+P RI+ +A+ +F
Sbjct: 307 RYEPDLRINPYEAMAHPFF 325
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 150/298 (50%), Gaps = 42/298 (14%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KK+ + + A RE+ ++K + H+N+I L + T P++ + D
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT---PQKTLEEFQD----- 141
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V E MD +L + + ++ + Q+L G+ + H ++HRD+K SN++
Sbjct: 142 --VYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 196
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIF 199
+ ++ LK+ DFGLAR+ +T V+T +YR PE++LG Y VD+WSVGCI
Sbjct: 197 VKSDCTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 253
Query: 200 AELLNGKPILPGKNEAEQLSKIFELCGSP--------DETIWPGVSKMPAY--------- 242
E++ K + PG++ +Q +K+ E G+P T+ V P Y
Sbjct: 254 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLF 313
Query: 243 -NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+ P+ + +++ A +LL KML++DP++RIS DAL Y W DP
Sbjct: 314 PDSLFPADSEHNKLKA------SQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 365
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 150/298 (50%), Gaps = 42/298 (14%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KK+ + + A RE+ ++K + H+N+I L + T P++ + D
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFT---PQKTLEEFQD----- 103
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V E MD +L + + ++ + Q+L G+ + H ++HRD+K SN++
Sbjct: 104 --VYLVMELMDANLXQVIQ---MELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIV 158
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIF 199
+ ++ LK+ DFGLAR+ +T V+T +YR PE++LG Y VD+WSVGCI
Sbjct: 159 VKSDXTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 215
Query: 200 AELLNGKPILPGKNEAEQLSKIFELCGSP--------DETIWPGVSKMPAY--------- 242
E++ K + PG++ +Q +K+ E G+P T+ V P Y
Sbjct: 216 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLF 275
Query: 243 -NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+ P+ + +++ A +LL KML++DP++RIS DAL Y W DP
Sbjct: 276 PDSLFPADSEHNKLKA------SQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 327
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 150/298 (50%), Gaps = 42/298 (14%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KK+ + + A RE+ ++K + H+N+I L + T P++ + D
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT---PQKTLEEFQD----- 141
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V E MD +L + + ++ + Q+L G+ + H ++HRD+K SN++
Sbjct: 142 --VYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 196
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIF 199
+ ++ LK+ DFGLAR+ +T V+T +YR PE++LG Y VD+WSVGCI
Sbjct: 197 VKSDCTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 253
Query: 200 AELLNGKPILPGKNEAEQLSKIFELCGSP--------DETIWPGVSKMPAY--------- 242
E++ K + PG++ +Q +K+ E G+P T+ V P Y
Sbjct: 254 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLF 313
Query: 243 -NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+ P+ + +++ A +LL KML++DP++RIS DAL Y W DP
Sbjct: 314 PDSLFPADSEHNKLKA------SQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 365
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 150/298 (50%), Gaps = 42/298 (14%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KK+ + + A RE+ ++K + H+N+I L + T P++ + D
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFT---PQKTLEEFQD----- 103
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V E MD +L + + ++ + Q+L G+ + H ++HRD+K SN++
Sbjct: 104 --VYLVMELMDANLXQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIF 199
+ ++ LK+ DFGLAR+ +T V+T +YR PE++LG Y VD+WSVGCI
Sbjct: 159 VKSDXTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 215
Query: 200 AELLNGKPILPGKNEAEQLSKIFELCGSP--------DETIWPGVSKMPAY--------- 242
E++ K + PG++ +Q +K+ E G+P T+ V P Y
Sbjct: 216 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLF 275
Query: 243 -NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+ P+ + +++ A +LL KML++DP++RIS DAL Y W DP
Sbjct: 276 PDSLFPADSEHNKLKA------SQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 327
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 150/298 (50%), Gaps = 42/298 (14%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KK+ + + A RE+ ++K + H+N+I L + T P++ + D
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT---PQKTLEEFQD----- 104
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V E MD +L + + ++ + Q+L G+ + H ++HRD+K SN++
Sbjct: 105 --VYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 159
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIF 199
+ ++ LK+ DFGLAR+ +T V+T +YR PE++LG Y VD+WSVGCI
Sbjct: 160 VKSDCTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 216
Query: 200 AELLNGKPILPGKNEAEQLSKIFELCGSP--------DETIWPGVSKMPAY--------- 242
E++ K + PG++ +Q +K+ E G+P T+ V P Y
Sbjct: 217 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLF 276
Query: 243 -NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+ P+ + +++ A +LL KML++DP++RIS DAL Y W DP
Sbjct: 277 PDSLFPADSEHNKLKA------SQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 328
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 150/298 (50%), Gaps = 42/298 (14%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KK+ + + A RE+ ++K + H+N+I L + T P++ + D
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT---PQKTLEEFQD----- 103
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V E MD +L + + ++ + Q+L G+ + H ++HRD+K SN++
Sbjct: 104 --VYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIF 199
+ ++ LK+ DFGLAR+ +T V+T +YR PE++LG Y VD+WSVGCI
Sbjct: 159 VKSDCTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 215
Query: 200 AELLNGKPILPGKNEAEQLSKIFELCGSP--------DETIWPGVSKMPAY--------- 242
E++ K + PG++ +Q +K+ E G+P T+ V P Y
Sbjct: 216 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLF 275
Query: 243 -NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+ P+ + +++ A +LL KML++DP++RIS DAL Y W DP
Sbjct: 276 PDSLFPADSEHNKLKA------SQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 327
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 150/298 (50%), Gaps = 42/298 (14%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KK+ + + A RE+ ++K + H+N+I L + T P++ + D
Sbjct: 51 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT---PQKTLEEFQD----- 102
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V E MD +L + + ++ + Q+L G+ + H ++HRD+K SN++
Sbjct: 103 --VYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 157
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIF 199
+ ++ LK+ DFGLAR+ +T V+T +YR PE++LG Y VD+WSVGCI
Sbjct: 158 VKSDCTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 214
Query: 200 AELLNGKPILPGKNEAEQLSKIFELCGSP--------DETIWPGVSKMPAY--------- 242
E++ K + PG++ +Q +K+ E G+P T+ V P Y
Sbjct: 215 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLF 274
Query: 243 -NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+ P+ + +++ A +LL KML++DP++RIS DAL Y W DP
Sbjct: 275 PDSLFPADSEHNKLKA------SQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 326
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 150/298 (50%), Gaps = 42/298 (14%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KK+ + + A RE+ ++K + H+N+I L + T P++ + D
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT---PQKTLEEFQD----- 104
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V E MD +L + + ++ + Q+L G+ + H ++HRD+K SN++
Sbjct: 105 --VYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 159
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIF 199
+ ++ LK+ DFGLAR+ +T V+T +YR PE++LG Y VD+WSVGCI
Sbjct: 160 VKSDCTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 216
Query: 200 AELLNGKPILPGKNEAEQLSKIFELCGSP--------DETIWPGVSKMPAY--------- 242
E++ K + PG++ +Q +K+ E G+P T+ V P Y
Sbjct: 217 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLF 276
Query: 243 -NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+ P+ + +++ A +LL KML++DP++RIS DAL Y W DP
Sbjct: 277 PDSLFPADSEHNKLKA------SQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 328
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 150/298 (50%), Gaps = 42/298 (14%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KK+ + + A RE+ ++K + H+N+I L + T P++ + D
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT---PQKTLEEFQD----- 97
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V E MD +L + + ++ + Q+L G+ + H ++HRD+K SN++
Sbjct: 98 --VYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 152
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIF 199
+ ++ LK+ DFGLAR+ +T V+T +YR PE++LG Y VD+WSVGCI
Sbjct: 153 VKSDCTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 209
Query: 200 AELLNGKPILPGKNEAEQLSKIFELCGSP--------DETIWPGVSKMPAY--------- 242
E++ K + PG++ +Q +K+ E G+P T+ V P Y
Sbjct: 210 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLF 269
Query: 243 -NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+ P+ + +++ A +LL KML++DP++RIS DAL Y W DP
Sbjct: 270 PDSLFPADSEHNKLKA------SQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 321
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 150/298 (50%), Gaps = 42/298 (14%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KK+ + + A RE+ ++K + H+N+I L + T P++ + D
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT---PQKTLEEFQD----- 103
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V E MD +L + + ++ + Q+L G+ + H ++HRD+K SN++
Sbjct: 104 --VYLVMELMDANLXQVIQ---MELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIV 158
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIF 199
+ ++ LK+ DFGLAR+ +T V+T +YR PE++LG Y VD+WSVGCI
Sbjct: 159 VKSDXTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 215
Query: 200 AELLNGKPILPGKNEAEQLSKIFELCGSP--------DETIWPGVSKMPAY--------- 242
E++ K + PG++ +Q +K+ E G+P T+ V P Y
Sbjct: 216 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLF 275
Query: 243 -NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+ P+ + +++ A +LL KML++DP++RIS DAL Y W DP
Sbjct: 276 PDSLFPADSEHNKLKA------SQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 327
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 150/298 (50%), Gaps = 42/298 (14%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KK+ + + A RE+ ++K + H+N+I L + T P++ + D
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT---PQKTLEEFQD----- 103
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V E MD +L + + ++ + Q+L G+ + H ++HRD+K SN++
Sbjct: 104 --VYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIF 199
+ ++ LK+ DFGLAR+ +T V+T +YR PE++LG Y VD+WSVGCI
Sbjct: 159 VKSDCTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 215
Query: 200 AELLNGKPILPGKNEAEQLSKIFELCGSP--------DETIWPGVSKMPAY--------- 242
E++ K + PG++ +Q +K+ E G+P T+ V P Y
Sbjct: 216 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLF 275
Query: 243 -NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+ P+ + +++ A +LL KML++DP++RIS DAL Y W DP
Sbjct: 276 PDSLFPADSEHNKLKA------SQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 327
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 150/298 (50%), Gaps = 42/298 (14%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KK+ + + A RE+ ++K + H+N+I L + T P++ + D
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT---PQKTLEEFQD----- 96
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V E MD +L + + ++ + Q+L G+ + H ++HRD+K SN++
Sbjct: 97 --VYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 151
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIF 199
+ ++ LK+ DFGLAR+ +T V+T +YR PE++LG Y VD+WSVGCI
Sbjct: 152 VKSDCTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 208
Query: 200 AELLNGKPILPGKNEAEQLSKIFELCGSP--------DETIWPGVSKMPAY--------- 242
E++ K + PG++ +Q +K+ E G+P T+ V P Y
Sbjct: 209 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLF 268
Query: 243 -NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+ P+ + +++ A +LL KML++DP++RIS DAL Y W DP
Sbjct: 269 PDSLFPADSEHNKLKA------SQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 320
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 147/292 (50%), Gaps = 30/292 (10%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KK+ + + A RE+ ++K + H+N+I L + T P++ + D
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFT---PQKSLEEFQD----- 103
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V E MD +L+ + + ++ + Q+L G+ + H ++HRD+K SN++
Sbjct: 104 --VYIVMELMDANLSQVIQ---MELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIV 158
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIF 199
+ ++ LK+ DFGLAR+ +T V+T +YR PE++LG Y VD+WSVGCI
Sbjct: 159 VKSDATLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 215
Query: 200 AELLNGKPILPGKNEAEQLSKIFELCGSPD--------ETIWPGVSKMPAYNHFKPSRTM 251
E++ G + PG + +Q +K+ E G+P T+ V P Y + +
Sbjct: 216 GEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLF 275
Query: 252 KRRVREVFRHFDR----HALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+ ++ A +LL KML++D S+RIS +AL Y W DP
Sbjct: 276 PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDP 327
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 150/298 (50%), Gaps = 42/298 (14%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KK+ + + A RE+ ++K + H+N+I L + T P++ + D
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT---PQKTLEEFQD----- 96
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V E MD +L + + ++ + Q+L G+ + H ++HRD+K SN++
Sbjct: 97 --VYLVMELMDANLXQVIQ---MELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIV 151
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIF 199
+ ++ LK+ DFGLAR+ +T V+T +YR PE++LG Y VD+WSVGCI
Sbjct: 152 VKSDXTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 208
Query: 200 AELLNGKPILPGKNEAEQLSKIFELCGSP--------DETIWPGVSKMPAY--------- 242
E++ K + PG++ +Q +K+ E G+P T+ V P Y
Sbjct: 209 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLF 268
Query: 243 -NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+ P+ + +++ A +LL KML++DP++RIS DAL Y W DP
Sbjct: 269 PDSLFPADSEHNKLKA------SQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 320
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 150/298 (50%), Gaps = 42/298 (14%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KK+ + + A RE+ ++K + H+N+I L + T P++ + D
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT---PQKTLEEFQD----- 97
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V E MD +L + + ++ + Q+L G+ + H ++HRD+K SN++
Sbjct: 98 --VYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 152
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIF 199
+ ++ LK+ DFGLAR+ +T V+T +YR PE++LG Y VD+WSVGCI
Sbjct: 153 VKSDCTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 209
Query: 200 AELLNGKPILPGKNEAEQLSKIFELCGSP--------DETIWPGVSKMPAY--------- 242
E++ K + PG++ +Q +K+ E G+P T+ V P Y
Sbjct: 210 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLF 269
Query: 243 -NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+ P+ + +++ A +LL KML++DP++RIS DAL Y W DP
Sbjct: 270 PDSLFPADSEHNKLKA------SQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 321
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 147/292 (50%), Gaps = 30/292 (10%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KK+ + + A RE+ ++K + H+N+I L + T P++ + D
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFT---PQKSLEEFQD----- 103
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V E MD +L+ + + ++ + Q+L G+ + H ++HRD+K SN++
Sbjct: 104 --VYIVMELMDANLSQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIF 199
+ ++ LK+ DFGLAR+ +T V+T +YR PE++LG Y VD+WSVGCI
Sbjct: 159 VKSDATLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 215
Query: 200 AELLNGKPILPGKNEAEQLSKIFELCGSPD--------ETIWPGVSKMPAYNHFKPSRTM 251
E++ G + PG + +Q +K+ E G+P T+ V P Y + +
Sbjct: 216 GEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLF 275
Query: 252 KRRVREVFRHFDR----HALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+ ++ A +LL KML++D S+RIS +AL Y W DP
Sbjct: 276 PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDP 327
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 147/292 (50%), Gaps = 30/292 (10%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KK+ + + A RE+ ++K + H+N+I L + T P++ + D
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT---PQKSLEEFQD----- 103
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V E MD +L+ + + ++ + Q+L G+ + H ++HRD+K SN++
Sbjct: 104 --VYIVMELMDANLSQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIF 199
+ ++ LK+ DFGLAR+ +T V+T +YR PE++LG Y VD+WSVGCI
Sbjct: 159 VKSDATLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 215
Query: 200 AELLNGKPILPGKNEAEQLSKIFELCGSPD--------ETIWPGVSKMPAYNHFKPSRTM 251
E++ G + PG + +Q +K+ E G+P T+ V P Y + +
Sbjct: 216 GEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLF 275
Query: 252 KRRVREVFRHFDR----HALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+ ++ A +LL KML++D S+RIS +AL Y W DP
Sbjct: 276 PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDP 327
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 147/292 (50%), Gaps = 30/292 (10%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KK+ + + A RE+ ++K + H+N+I L + T P++ + D
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT---PQKSLEEFQD----- 103
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V E MD +L+ + + ++ + Q+L G+ + H ++HRD+K SN++
Sbjct: 104 --VYIVMELMDANLSQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIF 199
+ ++ LK+ DFGLAR+ +T V+T +YR PE++LG Y VD+WSVGCI
Sbjct: 159 VKSDCTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 215
Query: 200 AELLNGKPILPGKNEAEQLSKIFELCGSPD--------ETIWPGVSKMPAYNHFKPSRTM 251
E++ G + PG + +Q +K+ E G+P T+ V P Y + +
Sbjct: 216 GEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLF 275
Query: 252 KRRVREVFRHFDR----HALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+ ++ A +LL KML++D S+RIS +AL Y W DP
Sbjct: 276 PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDP 327
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 148/296 (50%), Gaps = 38/296 (12%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KK+ + + A RE+ ++K + H+N+I L + T P++ + D
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT---PQKSLEEFQD----- 103
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V E MD +L + + ++ + Q+L G+ + H ++HRD+K SN++
Sbjct: 104 --VYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIF 199
+ ++ LK+ DFGLAR+ +T V+T +YR PE++LG Y VD+WSVGCI
Sbjct: 159 VKSDCTLKILDFGLARTAGTSF--MMTPEVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 215
Query: 200 AELLNGKPILPGKNEAEQLSKIFELCGSP--------DETIWPGVSKMPAYNHFKPSRTM 251
E++ G + PG + +Q +K+ E G+P T+ V P Y + +
Sbjct: 216 GEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGY----SF 271
Query: 252 KRRVREVFRHFD--------RHALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
++ +V D A +LL KML++D S+RIS +AL Y W DP
Sbjct: 272 EKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDP 327
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 146/292 (50%), Gaps = 30/292 (10%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KK+ + + A RE+ ++K + H+N+I L + T P++ + D
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT---PQKSLEEFQD----- 104
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V E MD +L + + ++ + Q+L G+ + H ++HRD+K SN++
Sbjct: 105 --VYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 159
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIF 199
+ ++ LK+ DFGLAR+ +T V+T +YR PE++LG Y VD+WSVGCI
Sbjct: 160 VKSDCTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 216
Query: 200 AELLNGKPILPGKNEAEQLSKIFELCGSP--------DETIWPGVSKMPAYNHFKPSRTM 251
E++ G + PG + +Q +K+ E G+P T+ V P Y + +
Sbjct: 217 GEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLF 276
Query: 252 KRRVREVFRHFDR----HALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+ ++ A +LL KML++D S+RIS +AL Y W DP
Sbjct: 277 PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDP 328
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 146/292 (50%), Gaps = 30/292 (10%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KK+ + + A RE+ ++K + H+N+I L + T P++ + D
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT---PQKSLEEFQD----- 103
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V E MD +L + + ++ + Q+L G+ + H ++HRD+K SN++
Sbjct: 104 --VYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIF 199
+ ++ LK+ DFGLAR+ +T V+T +YR PE++LG Y VD+WSVGCI
Sbjct: 159 VKSDCTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 215
Query: 200 AELLNGKPILPGKNEAEQLSKIFELCGSPD--------ETIWPGVSKMPAYNHFKPSRTM 251
E++ G + PG + +Q +K+ E G+P T+ V P Y + +
Sbjct: 216 GEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLF 275
Query: 252 KRRVREVFRHFDR----HALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+ ++ A +LL KML++D S+RIS +AL Y W DP
Sbjct: 276 PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDP 327
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 132/267 (49%), Gaps = 21/267 (7%)
Query: 38 AIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLA 97
+REI++L H N++ L++I P +K Y+V E M DL +
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFV-------HFEEPAMHKL----YLVTELMRTDLAQVI 124
Query: 98 DRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF 157
+ + I+ +M +L GLH H V+HRD+ N+L+ + ++ + DF LAR
Sbjct: 125 HDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARED 184
Query: 158 SYDHNNT--LTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEA 215
+ D N T +T+R WYR PEL++ + VDMWS GC+ AE+ N K + G
Sbjct: 185 TADANKTHYVTHR----WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY 240
Query: 216 EQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTM--KRRVREVFRHFDRHALELLEKM 273
QL+KI E+ G+P S A ++ + S + R V D AL+L+ KM
Sbjct: 241 NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKM 300
Query: 274 LMLDPSQRISAKDALDSEYFWT--DPL 298
L +P +RIS + AL YF + DPL
Sbjct: 301 LEFNPQRRISTEQALRHPYFESLFDPL 327
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 132/267 (49%), Gaps = 21/267 (7%)
Query: 38 AIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLA 97
+REI++L H N++ L++I P +K Y+V E M DL +
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFV-------HFEEPAMHKL----YLVTELMRTDLAQVI 124
Query: 98 DRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF 157
+ + I+ +M +L GLH H V+HRD+ N+L+ + ++ + DF LAR
Sbjct: 125 HDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARED 184
Query: 158 SYDHNNT--LTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEA 215
+ D N T +T+R WYR PEL++ + VDMWS GC+ AE+ N K + G
Sbjct: 185 TADANKTHYVTHR----WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY 240
Query: 216 EQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTM--KRRVREVFRHFDRHALELLEKM 273
QL+KI E+ G+P S A ++ + S + R V D AL+L+ KM
Sbjct: 241 NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKM 300
Query: 274 LMLDPSQRISAKDALDSEYFWT--DPL 298
L +P +RIS + AL YF + DPL
Sbjct: 301 LEFNPQRRISTEQALRHPYFESLFDPL 327
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 146/292 (50%), Gaps = 30/292 (10%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KK+ + + A RE+ ++K + H+N+I L + T P++ + D
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT---PQKSLEEFQD----- 103
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V E MD +L + + ++ + Q+L G+ + H ++HRD+K SN++
Sbjct: 104 --VYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIF 199
+ ++ LK+ DFGLAR+ +T V+T +YR PE++LG Y VD+WSVGCI
Sbjct: 159 VKSDCTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 215
Query: 200 AELLNGKPILPGKNEAEQLSKIFELCGSP--------DETIWPGVSKMPAYNHFKPSRTM 251
E++ G + PG + +Q +K+ E G+P T+ V P Y + +
Sbjct: 216 GEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLF 275
Query: 252 KRRVREVFRHFDR----HALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+ ++ A +LL KML++D S+RIS +AL Y W DP
Sbjct: 276 PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDP 327
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 147/292 (50%), Gaps = 30/292 (10%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KK+ + + A RE+ ++K + H+N+I L + T P++ + D
Sbjct: 57 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT---PQKSLEEFQD----- 108
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V E MD +L + + ++ + Q+L G+ + H ++HRD+K SN++
Sbjct: 109 --VYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 163
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIF 199
+ ++ LK+ DFGLAR+ +T V+T +YR PE++LG Y VD+WSVGCI
Sbjct: 164 VKSDCTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDLWSVGCIM 220
Query: 200 AELLNGKPILPGKNEAEQLSKIFELCGSP--------DETIWPGVSKMPAYNHFKPSRTM 251
E++ K + PG++ +Q +K+ E G+P T+ V P Y + +
Sbjct: 221 GEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLF 280
Query: 252 KRRVREVFRHFDR----HALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+ ++ A +LL KML++D S+RIS +AL Y W DP
Sbjct: 281 PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDP 332
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 147/292 (50%), Gaps = 40/292 (13%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KK+ + + A RE+ ++K + H+N+I L + T P++ + D
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFT---PQKTLEEFQD----- 103
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V E MD +L + + ++ + Q+L G+ + H ++HRD+K SN++
Sbjct: 104 --VYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIF 199
+ ++ LK+ DFGLAR+ +T V+T +YR PE++LG Y VD+WSVGCI
Sbjct: 159 VKSDXTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 215
Query: 200 AELLNGKPILPGKNEAEQLSKIFELCGSP--------DETIWPGVSKMPAY--------- 242
E++ K + PG++ +Q +K+ E G+P T+ V P Y
Sbjct: 216 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLF 275
Query: 243 -NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
+ P+ + +++ A +LL KML++DP++RIS DAL Y
Sbjct: 276 PDSLFPADSEHNKLKA------SQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 157/340 (46%), Gaps = 67/340 (19%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V++A + + VA+KK+ E +REI IL +L+ + +I+L +++ PE
Sbjct: 44 VYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHDLII---PE- 99
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ 127
D K+ Y+V E D DL L P + T +K + LL G + H +
Sbjct: 100 ------DLLKF-DELYIVLEIADSDLKKLFKTP-IFLTEQHVKTILYNLLLGEKFIHESG 151
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYD--------------------HNNTL-- 165
++HRD+K +N L++ + ++K+ DFGLAR+ + D HN L
Sbjct: 152 IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKK 211
Query: 166 --TNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK-----------PILPG- 211
T+ V+T WYR PEL+L Y ++D+WS GCIFAELLN P+ PG
Sbjct: 212 QLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLFPGS 271
Query: 212 ----------------KNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK--PSRTMKR 253
K+ +QL+ IF + G+P E ++K + K P+R
Sbjct: 272 SCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLFPTRD-GI 330
Query: 254 RVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
+ + + + ++LLE ML + +RI+ AL Y
Sbjct: 331 DLSKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYL 370
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 146/292 (50%), Gaps = 30/292 (10%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KK+ + + A RE+ ++K + H+N+I L + T P++ + D
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFT---PQKSLEEFQD----- 103
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V E MD +L+ + + ++ + Q+L G+ + H ++HRD+K SN++
Sbjct: 104 --VYIVMELMDANLSQVIQ---MELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIV 158
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIF 199
+ ++ LK+ DFGLAR+ +T V+T +YR PE++LG Y VD+WSVG I
Sbjct: 159 VKSDATLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGVIM 215
Query: 200 AELLNGKPILPGKNEAEQLSKIFELCGSPD--------ETIWPGVSKMPAYNHFKPSRTM 251
E++ G + PG + +Q +K+ E G+P T+ V P Y + +
Sbjct: 216 GEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLF 275
Query: 252 KRRVREVFRHFDR----HALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+ ++ A +LL KML++D S+RIS +AL Y W DP
Sbjct: 276 PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDP 327
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 146/292 (50%), Gaps = 30/292 (10%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KK+ + + A RE+ ++K + H+N+I L + T P++ + D
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFT---PQKSLEEFQD----- 103
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V E MD +L+ + + ++ + Q+L G+ + H ++HRD+K SN++
Sbjct: 104 --VYIVMELMDANLSQVIQ---MELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIV 158
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIF 199
+ ++ LK+ DFGLAR+ +T V+T +YR PE++LG Y VD+WSVG I
Sbjct: 159 VKSDATLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGVIM 215
Query: 200 AELLNGKPILPGKNEAEQLSKIFELCGSPD--------ETIWPGVSKMPAYNHFKPSRTM 251
E++ G + PG + +Q +K+ E G+P T+ V P Y + +
Sbjct: 216 GEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLF 275
Query: 252 KRRVREVFRHFDR----HALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+ ++ A +LL KML++D S+RIS +AL Y W DP
Sbjct: 276 PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDP 327
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 145/292 (49%), Gaps = 30/292 (10%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KK+ + + A RE+ ++K + H+N+I L + T P++ + D
Sbjct: 54 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT---PQKSLEEFQD----- 105
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V E MD +L + + ++ + Q+L G+ + H ++HRD+K SN++
Sbjct: 106 --VYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 160
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIF 199
+ ++ LK+ DFGLAR+ + V+T +YR PE++LG Y VD+WSVGCI
Sbjct: 161 VKSDCTLKILDFGLARTAGTSF--MMVPFVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 217
Query: 200 AELLNGKPILPGKNEAEQLSKIFELCGSP--------DETIWPGVSKMPAYNHFKPSRTM 251
E++ G + PG + +Q +K+ E G+P T+ V P Y + +
Sbjct: 218 GEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLF 277
Query: 252 KRRVREVFRHFDR----HALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+ ++ A +LL KML++D S+RIS +AL Y W DP
Sbjct: 278 PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDP 329
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 147/292 (50%), Gaps = 30/292 (10%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KK+ + + A RE+ ++K + H+N+I L + T P++ + D
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT---PQKSLEEFQD----- 97
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V E MD +L + + ++ + Q+L G+ + H ++HRD+K SN++
Sbjct: 98 --VYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 152
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIF 199
+ ++ LK+ DFGLAR+ +T V+T +YR PE++LG Y VD+WSVGCI
Sbjct: 153 VKSDCTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILG-MGYKENVDLWSVGCIM 209
Query: 200 AELLNGKPILPGKNEAEQLSKIFELCGSP--------DETIWPGVSKMPAYNHFKPSRTM 251
E++ K + PG++ +Q +K+ E G+P T+ V P Y + +
Sbjct: 210 GEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLF 269
Query: 252 KRRVREVFRHFDR----HALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+ ++ A +LL KML++D S+RIS +AL Y W DP
Sbjct: 270 PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDP 321
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 146/292 (50%), Gaps = 30/292 (10%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KK+ + + A RE+ ++K + H+N+I L + T P++ + D
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT---PQKSLEEFQD----- 103
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V E MD +L + + ++ + Q+L G+ + H ++HRD+K SN++
Sbjct: 104 --VYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIF 199
+ ++ LK+ DFGLAR+ + V+T +YR PE++LG Y VD+WSVGCI
Sbjct: 159 VKSDCTLKILDFGLARTAGTSF--MMEPEVVTRYYRAPEVILG-MGYKENVDLWSVGCIM 215
Query: 200 AELLNGKPILPGKNEAEQLSKIFELCGSP--------DETIWPGVSKMPAYNHFKPSRTM 251
E++ K + PG++ +Q +K+ E G+P T+ V P Y + +
Sbjct: 216 GEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLF 275
Query: 252 KRRVREVFRHFDR----HALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+ ++ A +LL KML++D S+RIS +AL Y W DP
Sbjct: 276 PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDP 327
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 146/292 (50%), Gaps = 30/292 (10%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+KK+ + + A RE+ ++K + H+N+I L + T P++ + D
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT---PQKSLEEFQD----- 103
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y+V E MD +L + + ++ + Q+L G+ + H ++HRD+K SN++
Sbjct: 104 --VYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIF 199
+ ++ LK+ DFGLAR+ + V+T +YR PE++LG Y VD+WSVGCI
Sbjct: 159 VKSDCTLKILDFGLARTAGTSF--MMEPEVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 215
Query: 200 AELLNGKPILPGKNEAEQLSKIFELCGSP--------DETIWPGVSKMPAYNHFKPSRTM 251
E++ K + PG++ +Q +K+ E G+P T+ V P Y + +
Sbjct: 216 GEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRNYVENRPKYAGYSFEKLF 275
Query: 252 KRRVREVFRHFDR----HALELLEKMLMLDPSQRISAKDALDSEYF--WTDP 297
+ ++ A +LL KML++D S+RIS +AL Y W DP
Sbjct: 276 PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDP 327
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 127/235 (54%), Gaps = 33/235 (14%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHE------NVIKLKEIV 60
QV A + K + VALK +R NEK F A EI+IL+ L+ + NVI + E
Sbjct: 112 QVVKAYDHKVHQHVALKMVR--NEKR-FHRQAAEEIRILEHLRKQDKDNTMNVIHMLENF 168
Query: 61 TSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTG 119
T +R M FE + +L L + + F++P ++ + +L
Sbjct: 169 T----------------FRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQC 212
Query: 120 LHYCHVNQVLHRDIKGSNLLIDNEGN--LKLADFGLARSFSYDHNNTLTNRVITLWYRPP 177
L H N+++H D+K N+L+ +G +K+ DFG S Y+H T + + +YR P
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG---SSCYEHQRVYTX-IQSRFYRAP 268
Query: 178 ELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETI 232
E++LGA +YG +DMWS+GCI AELL G P+LPG++E +QL+ + EL G P + +
Sbjct: 269 EVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKL 322
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 127/235 (54%), Gaps = 33/235 (14%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHE------NVIKLKEIV 60
QV A + K + VALK +R NEK F A EI+IL+ L+ + NVI + E
Sbjct: 112 QVVKAYDHKVHQHVALKMVR--NEKR-FHRQAAEEIRILEHLRKQDKDNTMNVIHMLENF 168
Query: 61 TSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTG 119
T +R M FE + +L L + + F++P ++ + +L
Sbjct: 169 T----------------FRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQC 212
Query: 120 LHYCHVNQVLHRDIKGSNLLIDNEGN--LKLADFGLARSFSYDHNNTLTNRVITLWYRPP 177
L H N+++H D+K N+L+ +G +K+ DFG S Y+H T + + +YR P
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG---SSCYEHQRVYTX-IQSRFYRAP 268
Query: 178 ELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETI 232
E++LGA +YG +DMWS+GCI AELL G P+LPG++E +QL+ + EL G P + +
Sbjct: 269 EVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKL 322
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 126/235 (53%), Gaps = 33/235 (14%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHE------NVIKLKEIV 60
QV A + K + VALK +R NEK F A EI+IL+ L+ + NVI + E
Sbjct: 112 QVVKAYDHKVHQHVALKMVR--NEKR-FHRQAAEEIRILEHLRKQDKDNTMNVIHMLENF 168
Query: 61 TSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTG 119
T +R M FE + +L L + + F++P ++ + +L
Sbjct: 169 T----------------FRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQC 212
Query: 120 LHYCHVNQVLHRDIKGSNLLIDNEGN--LKLADFGLARSFSYDHNNTLTNRVITLWYRPP 177
L H N+++H D+K N+L+ +G +K+ DFG S Y+H + + +YR P
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG---SSCYEHQRVYXX-IQSRFYRAP 268
Query: 178 ELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETI 232
E++LGA +YG +DMWS+GCI AELL G P+LPG++E +QL+ + EL G P + +
Sbjct: 269 EVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQKL 322
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 143/302 (47%), Gaps = 38/302 (12%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKL---QHENVIKLKEIVTSPG 64
V + +E TG VA+KK+ D P RE++I++ L H N+++L+ + G
Sbjct: 39 VQLGKEKSTGMSVAIKKVIQD------PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLG 92
Query: 65 PERDEQGRPDGNKYRGSTYM--VFEYMDHDLTGLADRPGLRFTVP---QIKCYMKQLLTG 119
ERD R Y+ V EY+ L R P IK ++ QL+
Sbjct: 93 -ERD----------RRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRS 141
Query: 120 ---LHYCHVNQVLHRDIKGSNLLIDN-EGNLKLADFGLARSFSYDHNNTLTNRVITLWYR 175
LH VN V HRDIK N+L++ +G LKL DFG A+ S N + + +YR
Sbjct: 142 IGCLHLPSVN-VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAY--ICSRYYR 198
Query: 176 PPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPG 235
PEL+ G Y AVD+WSVGCIFAE++ G+PI G N A QL +I + G P +
Sbjct: 199 APELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRK 258
Query: 236 VSKMPAYNHFKPSRTMKRRVREVFRHFD----RHALELLEKMLMLDPSQRISAKDALDSE 291
++ P++ + VF + A +LL +L P +R+ +AL
Sbjct: 259 LN--PSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHP 316
Query: 292 YF 293
YF
Sbjct: 317 YF 318
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 152/308 (49%), Gaps = 50/308 (16%)
Query: 6 SQVFMAREIKTGEIVALKKIRMDNEKEGFPIT---AIREIKILKKLQH-ENVIKLKEIVT 61
S+VF A I E V +K ++ P+ REIKIL+ L+ N+I L +IV
Sbjct: 51 SEVFEAINITNNEKVVVKILK--------PVKKNKIKREIKILENLRGGPNIITLADIVK 102
Query: 62 SPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGL 120
P + +VFE++++ D L T I+ YM ++L L
Sbjct: 103 DPVSR--------------TPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKAL 144
Query: 121 HYCHVNQVLHRDIKGSNLLIDNEG-NLKLADFGLARSFSYDHNNTLTNRVITLWYRPPEL 179
YCH ++HRD+K N++ID+E L+L D+GLA Y RV + +++ PEL
Sbjct: 145 DYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE--FYHPGQEYNVRVASRYFKGPEL 202
Query: 180 LLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIFELCGSPDETIWPGVSK 238
L+ Y ++DMWS+GC+ A ++ K P G + +QL +I ++ G+ D ++ + K
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED--LYDYIDK 260
Query: 239 M-----PAYNHFKPSRTMKRRVREVFRHFDRH------ALELLEKMLMLDPSQRISAKDA 287
P +N + KR R F H + AL+ L+K+L D R++A++A
Sbjct: 261 YNIELDPRFNDILGRHSRKRWER--FVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 318
Query: 288 LDSEYFWT 295
++ YF+T
Sbjct: 319 MEHPYFYT 326
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 38/257 (14%)
Query: 52 NVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIK 110
N+IKL + V P + + +VFEY+++ D L T I+
Sbjct: 94 NIIKLIDTVKDPVSK--------------TPALVFEYINNTDFKQLYQI----LTDFDIR 135
Query: 111 CYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDN-EGNLKLADFGLARSFSYDHNNTLTNRV 169
YM +LL L YCH ++HRD+K N++ID+ + L+L D+GLA Y RV
Sbjct: 136 FYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE--FYHPAQEYNVRV 193
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELL-NGKPILPGKNEAEQLSKIFELCGSP 228
+ +++ PELL+ Y ++DMWS+GC+ A ++ +P G++ +QL +I ++ G+
Sbjct: 194 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT- 252
Query: 229 DETIWPGVSKM-----PAYNHFKPSRTMKRRVREVFRHFD-RH-----ALELLEKMLMLD 277
E ++ + K P +N + KR E F H + RH AL+LL+K+L D
Sbjct: 253 -EELYGYLKKYHIDLDPHFNDILGQHSRKR--WENFIHSENRHLVSPEALDLLDKLLRYD 309
Query: 278 PSQRISAKDALDSEYFW 294
QR++AK+A++ YF+
Sbjct: 310 HQQRLTAKEAMEHPYFY 326
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 143/303 (47%), Gaps = 70/303 (23%)
Query: 7 QVFMAREIKTGE-----IVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVT 61
+V + ++ TG+ +++ ++++ +KE +RE+++LK+L H N++KL E
Sbjct: 65 EVILCKDKITGQECAVKVISKRQVKQKTDKESL----LREVQLLKQLDHPNIMKLYEFFE 120
Query: 62 SPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
G G Y E D + R RF+ ++Q+L+G+
Sbjct: 121 DKGY----------FYLVGEVYTGGELFDE----IISRK--RFSEVDAARIIRQVLSGIT 164
Query: 122 YCHVNQVLHRDIKGSNLLIDN---EGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPE 178
Y H N+++HRD+K NLL+++ + N+++ DFGL+ F + + + +++ T +Y PE
Sbjct: 165 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAYYIAPE 222
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI------FELCGSPDETI 232
+L G Y D+WS G I LL+G P G NE + L K+ FEL P
Sbjct: 223 VLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFEL---PQ--- 274
Query: 233 WPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEY 292
W VS+ A +L+ KML PS RISA+DALD E+
Sbjct: 275 WKKVSE--------------------------SAKDLIRKMLTYVPSMRISARDALDHEW 308
Query: 293 FWT 295
T
Sbjct: 309 IQT 311
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 38/257 (14%)
Query: 52 NVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIK 110
N+IKL + V P + + +VFEY+++ D L T I+
Sbjct: 99 NIIKLIDTVKDPVSK--------------TPALVFEYINNTDFKQLYQI----LTDFDIR 140
Query: 111 CYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDN-EGNLKLADFGLARSFSYDHNNTLTNRV 169
YM +LL L YCH ++HRD+K N++ID+ + L+L D+GLA Y RV
Sbjct: 141 FYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE--FYHPAQEYNVRV 198
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELL-NGKPILPGKNEAEQLSKIFELCGSP 228
+ +++ PELL+ Y ++DMWS+GC+ A ++ +P G++ +QL +I ++ G+
Sbjct: 199 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT- 257
Query: 229 DETIWPGVSKM-----PAYNHFKPSRTMKRRVREVFRHFD-RH-----ALELLEKMLMLD 277
E ++ + K P +N + KR E F H + RH AL+LL+K+L D
Sbjct: 258 -EELYGYLKKYHIDLDPHFNDILGQHSRKR--WENFIHSENRHLVSPEALDLLDKLLRYD 314
Query: 278 PSQRISAKDALDSEYFW 294
QR++AK+A++ YF+
Sbjct: 315 HQQRLTAKEAMEHPYFY 331
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 143/303 (47%), Gaps = 70/303 (23%)
Query: 7 QVFMAREIKTGE-----IVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVT 61
+V + ++ TG+ +++ ++++ +KE +RE+++LK+L H N++KL E
Sbjct: 64 EVILCKDKITGQECAVKVISKRQVKQKTDKESL----LREVQLLKQLDHPNIMKLYEFFE 119
Query: 62 SPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
G G Y E D + R RF+ ++Q+L+G+
Sbjct: 120 DKGY----------FYLVGEVYTGGELFDE----IISRK--RFSEVDAARIIRQVLSGIT 163
Query: 122 YCHVNQVLHRDIKGSNLLIDN---EGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPE 178
Y H N+++HRD+K NLL+++ + N+++ DFGL+ F + + + +++ T +Y PE
Sbjct: 164 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAYYIAPE 221
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI------FELCGSPDETI 232
+L G Y D+WS G I LL+G P G NE + L K+ FEL P
Sbjct: 222 VLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFEL---PQ--- 273
Query: 233 WPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEY 292
W VS+ A +L+ KML PS RISA+DALD E+
Sbjct: 274 WKKVSE--------------------------SAKDLIRKMLTYVPSMRISARDALDHEW 307
Query: 293 FWT 295
T
Sbjct: 308 IQT 310
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 131/259 (50%), Gaps = 40/259 (15%)
Query: 52 NVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQ--I 109
N+I L +IV P + +VFE++++ D LR T+ I
Sbjct: 93 NIITLADIVKDPVSR--------------TPALVFEHVNN-----TDFKQLRQTLTDYDI 133
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG-NLKLADFGLARSFSYDHNNTLTNR 168
+ YM ++L L YCH ++HRD+K N++ID+E L+L D+GLA Y R
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE--FYHPGQEYNVR 191
Query: 169 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIFELCGS 227
V + +++ PELL+ Y ++DMWS+GC+ A ++ K P G + +QL +I ++ G+
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Query: 228 PDETIWPGVSKM-----PAYNHFKPSRTMKRRVREVFRHFDRH------ALELLEKMLML 276
D ++ + K P +N + KR R F H + AL+ L+K+L
Sbjct: 252 ED--LYDYIDKYNIELDPRFNDILGRHSRKRWER--FVHSENQHLVSPEALDFLDKLLRY 307
Query: 277 DPSQRISAKDALDSEYFWT 295
D R++A++A++ YF+T
Sbjct: 308 DHQSRLTAREAMEHPYFYT 326
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 143/303 (47%), Gaps = 70/303 (23%)
Query: 7 QVFMAREIKTGE-----IVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVT 61
+V + ++ TG+ +++ ++++ +KE +RE+++LK+L H N++KL E
Sbjct: 47 EVILCKDKITGQECAVKVISKRQVKQKTDKESL----LREVQLLKQLDHPNIMKLYEFFE 102
Query: 62 SPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
G G Y E D + R RF+ ++Q+L+G+
Sbjct: 103 DKGY----------FYLVGEVYTGGELFDE----IISRK--RFSEVDAARIIRQVLSGIT 146
Query: 122 YCHVNQVLHRDIKGSNLLIDN---EGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPE 178
Y H N+++HRD+K NLL+++ + N+++ DFGL+ F + + + +++ T +Y PE
Sbjct: 147 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAYYIAPE 204
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI------FELCGSPDETI 232
+L G Y D+WS G I LL+G P G NE + L K+ FEL P
Sbjct: 205 VLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFEL---PQ--- 256
Query: 233 WPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEY 292
W VS+ A +L+ KML PS RISA+DALD E+
Sbjct: 257 WKKVSE--------------------------SAKDLIRKMLTYVPSMRISARDALDHEW 290
Query: 293 FWT 295
T
Sbjct: 291 IQT 293
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 143/303 (47%), Gaps = 70/303 (23%)
Query: 7 QVFMAREIKTGE-----IVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVT 61
+V + ++ TG+ +++ ++++ +KE +RE+++LK+L H N++KL E
Sbjct: 41 EVILCKDKITGQECAVKVISKRQVKQKTDKESL----LREVQLLKQLDHPNIMKLYEFFE 96
Query: 62 SPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
G G Y E D + R RF+ ++Q+L+G+
Sbjct: 97 DKGY----------FYLVGEVYTGGELFDE----IISRK--RFSEVDAARIIRQVLSGIT 140
Query: 122 YCHVNQVLHRDIKGSNLLIDN---EGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPE 178
Y H N+++HRD+K NLL+++ + N+++ DFGL+ F + + + +++ T +Y PE
Sbjct: 141 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAYYIAPE 198
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI------FELCGSPDETI 232
+L G Y D+WS G I LL+G P G NE + L K+ FEL P
Sbjct: 199 VLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFEL---PQ--- 250
Query: 233 WPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEY 292
W VS+ A +L+ KML PS RISA+DALD E+
Sbjct: 251 WKKVSE--------------------------SAKDLIRKMLTYVPSMRISARDALDHEW 284
Query: 293 FWT 295
T
Sbjct: 285 IQT 287
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 129/258 (50%), Gaps = 38/258 (14%)
Query: 52 NVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIK 110
N+I L +IV P + +VFE++++ D L T I+
Sbjct: 93 NIITLADIVKDPVSR--------------TPALVFEHVNNTDFKQLYQT----LTDYDIR 134
Query: 111 CYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG-NLKLADFGLARSFSYDHNNTLTNRV 169
YM ++L L YCH ++HRD+K N+LID+E L+L D+GLA Y RV
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAE--FYHPGQEYNVRV 192
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIFELCGSP 228
+ +++ PELL+ Y ++DMWS+GC+ A ++ K P G + +QL +I ++ G+
Sbjct: 193 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 252
Query: 229 DETIWPGVSKM-----PAYNHFKPSRTMKRRVREVFRHFDRH------ALELLEKMLMLD 277
D ++ + K P +N + KR R F H + AL+ L+K+L D
Sbjct: 253 D--LYDYIDKYNIELDPRFNDILGRHSRKRWER--FVHSENQHLVSPEALDFLDKLLRYD 308
Query: 278 PSQRISAKDALDSEYFWT 295
R++A++A++ YF+T
Sbjct: 309 HQSRLTAREAMEHPYFYT 326
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 129/258 (50%), Gaps = 38/258 (14%)
Query: 52 NVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIK 110
N+I L +IV P + +VFE++++ D L T I+
Sbjct: 93 NIITLADIVKDPVSR--------------TPALVFEHVNNTDFKQLYQT----LTDYDIR 134
Query: 111 CYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG-NLKLADFGLARSFSYDHNNTLTNRV 169
YM ++L L YCH ++HRD+K N++ID+E L+L D+GLA Y RV
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE--FYHPGQEYNVRV 192
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIFELCGSP 228
+ +++ PELL+ Y ++DMWS+GC+ A ++ K P G + +QL +I ++ G+
Sbjct: 193 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 252
Query: 229 DETIWPGVSKM-----PAYNHFKPSRTMKRRVREVFRHFDRH------ALELLEKMLMLD 277
D ++ + K P +N + KR R F H + AL+ L+K+L D
Sbjct: 253 D--LYDYIDKYNIELDPRFNDILGRHSRKRWER--FVHSENQHLVSPEALDFLDKLLRYD 308
Query: 278 PSQRISAKDALDSEYFWT 295
R++A++A++ YF+T
Sbjct: 309 HQSRLTAREAMEHPYFYT 326
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 129/258 (50%), Gaps = 38/258 (14%)
Query: 52 NVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIK 110
N+I L +IV P + +VFE++++ D L T I+
Sbjct: 98 NIITLADIVKDPVSR--------------TPALVFEHVNNTDFKQLYQT----LTDYDIR 139
Query: 111 CYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG-NLKLADFGLARSFSYDHNNTLTNRV 169
YM ++L L YCH ++HRD+K N++ID+E L+L D+GLA Y RV
Sbjct: 140 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE--FYHPGQEYNVRV 197
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIFELCGSP 228
+ +++ PELL+ Y ++DMWS+GC+ A ++ K P G + +QL +I ++ G+
Sbjct: 198 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 257
Query: 229 DETIWPGVSKM-----PAYNHFKPSRTMKRRVREVFRHFDRH------ALELLEKMLMLD 277
D ++ + K P +N + KR R F H + AL+ L+K+L D
Sbjct: 258 D--LYDYIDKYNIELDPRFNDILGRHSRKRWER--FVHSENQHLVSPEALDFLDKLLRYD 313
Query: 278 PSQRISAKDALDSEYFWT 295
R++A++A++ YF+T
Sbjct: 314 HQSRLTAREAMEHPYFYT 331
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 129/258 (50%), Gaps = 38/258 (14%)
Query: 52 NVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIK 110
N+I L +IV P + +VFE++++ D L T I+
Sbjct: 93 NIITLADIVKDPVSR--------------TPALVFEHVNNTDFKQLYQT----LTDYDIR 134
Query: 111 CYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG-NLKLADFGLARSFSYDHNNTLTNRV 169
YM ++L L YCH ++HRD+K N++ID+E L+L D+GLA Y RV
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE--FYHPGQEYNVRV 192
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIFELCGSP 228
+ +++ PELL+ Y ++DMWS+GC+ A ++ K P G + +QL +I ++ G+
Sbjct: 193 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 252
Query: 229 DETIWPGVSKM-----PAYNHFKPSRTMKRRVREVFRHFDRH------ALELLEKMLMLD 277
D ++ + K P +N + KR R F H + AL+ L+K+L D
Sbjct: 253 D--LYDYIDKYNIELDPRFNDILGRHSRKRWER--FVHSENQHLVSPEALDFLDKLLRYD 308
Query: 278 PSQRISAKDALDSEYFWT 295
R++A++A++ YF+T
Sbjct: 309 HQSRLTAREAMEHPYFYT 326
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 129/258 (50%), Gaps = 38/258 (14%)
Query: 52 NVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIK 110
N+I L +IV P + +VFE++++ D L T I+
Sbjct: 93 NIITLADIVKDPVSR--------------TPALVFEHVNNTDFKQLYQT----LTDYDIR 134
Query: 111 CYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG-NLKLADFGLARSFSYDHNNTLTNRV 169
YM ++L L YCH ++HRD+K N++ID+E L+L D+GLA Y RV
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE--FYHPGQEYNVRV 192
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIFELCGSP 228
+ +++ PELL+ Y ++DMWS+GC+ A ++ K P G + +QL +I ++ G+
Sbjct: 193 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 252
Query: 229 DETIWPGVSKM-----PAYNHFKPSRTMKRRVREVFRHFDRH------ALELLEKMLMLD 277
D ++ + K P +N + KR R F H + AL+ L+K+L D
Sbjct: 253 D--LYDYIDKYNIELDPRFNDILGRHSRKRWER--FVHSENQHLVSPEALDFLDKLLRYD 308
Query: 278 PSQRISAKDALDSEYFWT 295
R++A++A++ YF+T
Sbjct: 309 HQSRLTAREAMEHPYFYT 326
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 129/258 (50%), Gaps = 38/258 (14%)
Query: 52 NVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIK 110
N+I L +IV P + +VFE++++ D L T I+
Sbjct: 93 NIITLADIVKDPVSR--------------TPALVFEHVNNTDFKQLYQT----LTDYDIR 134
Query: 111 CYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG-NLKLADFGLARSFSYDHNNTLTNRV 169
YM ++L L YCH ++HRD+K N++ID+E L+L D+GLA Y RV
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE--FYHPGQEYNVRV 192
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIFELCGSP 228
+ +++ PELL+ Y ++DMWS+GC+ A ++ K P G + +QL +I ++ G+
Sbjct: 193 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 252
Query: 229 DETIWPGVSKM-----PAYNHFKPSRTMKRRVREVFRHFDRH------ALELLEKMLMLD 277
D ++ + K P +N + KR R F H + AL+ L+K+L D
Sbjct: 253 D--LYDYIDKYNIELDPRFNDILGRHSRKRWER--FVHSENQHLVSPEALDFLDKLLRYD 308
Query: 278 PSQRISAKDALDSEYFWT 295
R++A++A++ YF+T
Sbjct: 309 HQSRLTAREAMEHPYFYT 326
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 129/258 (50%), Gaps = 38/258 (14%)
Query: 52 NVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIK 110
N+I L +IV P + +VFE++++ D L T I+
Sbjct: 92 NIITLADIVKDPVSR--------------TPALVFEHVNNTDFKQLYQT----LTDYDIR 133
Query: 111 CYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG-NLKLADFGLARSFSYDHNNTLTNRV 169
YM ++L L YCH ++HRD+K N++ID+E L+L D+GLA Y RV
Sbjct: 134 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE--FYHPGQEYNVRV 191
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIFELCGSP 228
+ +++ PELL+ Y ++DMWS+GC+ A ++ K P G + +QL +I ++ G+
Sbjct: 192 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 251
Query: 229 DETIWPGVSKM-----PAYNHFKPSRTMKRRVREVFRHFDRH------ALELLEKMLMLD 277
D ++ + K P +N + KR R F H + AL+ L+K+L D
Sbjct: 252 D--LYDYIDKYNIELDPRFNDILGRHSRKRWER--FVHSENQHLVSPEALDFLDKLLRYD 307
Query: 278 PSQRISAKDALDSEYFWT 295
R++A++A++ YF+T
Sbjct: 308 HQSRLTAREAMEHPYFYT 325
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 129/258 (50%), Gaps = 38/258 (14%)
Query: 52 NVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIK 110
N+I L +IV P + +VFE++++ D L T I+
Sbjct: 92 NIITLADIVKDPVSR--------------TPALVFEHVNNTDFKQLYQT----LTDYDIR 133
Query: 111 CYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG-NLKLADFGLARSFSYDHNNTLTNRV 169
YM ++L L YCH ++HRD+K N++ID+E L+L D+GLA Y RV
Sbjct: 134 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE--FYHPGQEYNVRV 191
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIFELCGSP 228
+ +++ PELL+ Y ++DMWS+GC+ A ++ K P G + +QL +I ++ G+
Sbjct: 192 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 251
Query: 229 DETIWPGVSKM-----PAYNHFKPSRTMKRRVREVFRHFDRH------ALELLEKMLMLD 277
D ++ + K P +N + KR R F H + AL+ L+K+L D
Sbjct: 252 D--LYDYIDKYNIELDPRFNDILGRHSRKRWER--FVHSENQHLVSPEALDFLDKLLRYD 307
Query: 278 PSQRISAKDALDSEYFWT 295
R++A++A++ YF+T
Sbjct: 308 HQSRLTAREAMEHPYFYT 325
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 129/258 (50%), Gaps = 38/258 (14%)
Query: 52 NVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIK 110
N+I L +IV P + +VFE++++ D L T I+
Sbjct: 93 NIITLADIVKDPVSR--------------TPALVFEHVNNTDFKQLYQT----LTDYDIR 134
Query: 111 CYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG-NLKLADFGLARSFSYDHNNTLTNRV 169
YM ++L L YCH ++HRD+K N++ID+E L+L D+GLA Y RV
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE--FYHPGQEYNVRV 192
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIFELCGSP 228
+ +++ PELL+ Y ++DMWS+GC+ A ++ K P G + +QL +I ++ G+
Sbjct: 193 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 252
Query: 229 DETIWPGVSKM-----PAYNHFKPSRTMKRRVREVFRHFDRH------ALELLEKMLMLD 277
D ++ + K P +N + KR R F H + AL+ L+K+L D
Sbjct: 253 D--LYDYIDKYNIELDPRFNDILGRHSRKRWER--FVHSENQHLVSPEALDFLDKLLRYD 308
Query: 278 PSQRISAKDALDSEYFWT 295
R++A++A++ YF+T
Sbjct: 309 HQSRLTAREAMEHPYFYT 326
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 129/258 (50%), Gaps = 38/258 (14%)
Query: 52 NVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIK 110
N+I L +IV P + +VFE++++ D L T I+
Sbjct: 93 NIITLADIVKDPVSR--------------TPALVFEHVNNTDFKQLYQT----LTDYDIR 134
Query: 111 CYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG-NLKLADFGLARSFSYDHNNTLTNRV 169
YM ++L L YCH ++HRD+K N++ID+E L+L D+GLA Y RV
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE--FYHPGQEYNVRV 192
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIFELCGSP 228
+ +++ PELL+ Y ++DMWS+GC+ A ++ K P G + +QL +I ++ G+
Sbjct: 193 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 252
Query: 229 DETIWPGVSKM-----PAYNHFKPSRTMKRRVREVFRHFDRH------ALELLEKMLMLD 277
D ++ + K P +N + KR R F H + AL+ L+K+L D
Sbjct: 253 D--LYDYIDKYNIELDPRFNDILGRHSRKRWER--FVHSENQHLVSPEALDFLDKLLRYD 308
Query: 278 PSQRISAKDALDSEYFWT 295
R++A++A++ YF+T
Sbjct: 309 HQSRLTAREAMEHPYFYT 326
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 129/258 (50%), Gaps = 38/258 (14%)
Query: 52 NVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIK 110
N+I L +IV P + +VFE++++ D L T I+
Sbjct: 93 NIITLADIVKDPVSR--------------TPALVFEHVNNTDFKQLYQT----LTDYDIR 134
Query: 111 CYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG-NLKLADFGLARSFSYDHNNTLTNRV 169
YM ++L L YCH ++HRD+K N++ID+E L+L D+GLA Y RV
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE--FYHPGQEYNVRV 192
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIFELCGSP 228
+ +++ PELL+ Y ++DMWS+GC+ A ++ K P G + +QL +I ++ G+
Sbjct: 193 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 252
Query: 229 DETIWPGVSKM-----PAYNHFKPSRTMKRRVREVFRHFDRH------ALELLEKMLMLD 277
D ++ + K P +N + KR R F H + AL+ L+K+L D
Sbjct: 253 D--LYDYIDKYNIELDPRFNDILGRHSRKRWER--FVHSENQHLVSPEALDFLDKLLRYD 308
Query: 278 PSQRISAKDALDSEYFWT 295
R++A++A++ YF+T
Sbjct: 309 HQSRLTAREAMEHPYFYT 326
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 129/258 (50%), Gaps = 38/258 (14%)
Query: 52 NVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIK 110
N+I L +IV P + +VFE++++ D L T I+
Sbjct: 91 NIITLADIVKDPVSR--------------TPALVFEHVNNTDFKQLYQT----LTDYDIR 132
Query: 111 CYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG-NLKLADFGLARSFSYDHNNTLTNRV 169
YM ++L L YCH ++HRD+K N++ID+E L+L D+GLA Y RV
Sbjct: 133 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE--FYHPGQEYNVRV 190
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIFELCGSP 228
+ +++ PELL+ Y ++DMWS+GC+ A ++ K P G + +QL +I ++ G+
Sbjct: 191 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 250
Query: 229 DETIWPGVSKM-----PAYNHFKPSRTMKRRVREVFRHFDRH------ALELLEKMLMLD 277
D ++ + K P +N + KR R F H + AL+ L+K+L D
Sbjct: 251 D--LYDYIDKYNIELDPRFNDILGRHSRKRWER--FVHSENQHLVSPEALDFLDKLLRYD 306
Query: 278 PSQRISAKDALDSEYFWT 295
R++A++A++ YF+T
Sbjct: 307 HQSRLTAREAMEHPYFYT 324
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 121/277 (43%), Gaps = 48/277 (17%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPG 64
++V +AR I TG+ VA+K I RE++I+K L H N++KL E++ +
Sbjct: 27 FAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIET-- 84
Query: 65 PERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCH 124
+ Y+V EY R + + +Q+++ + YCH
Sbjct: 85 --------------EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 125 VNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGAT 184
++HRD+K NLL+D + N+K+ADFG + F++ N L + Y PEL G
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF--GNKLDTFCGSPPYAAPELFQGKK 188
Query: 185 KYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNH 244
GP VD+WS+G I L++G G+N E E + G ++P Y
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL-----------RERVLRGKYRIPFY-- 235
Query: 245 FKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQR 281
LL+K L+L+PS+R
Sbjct: 236 -----------------MSTDCENLLKKFLILNPSKR 255
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 121/277 (43%), Gaps = 48/277 (17%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPG 64
++V +AR I TG+ VA+K I RE++I+K L H N++KL E++ +
Sbjct: 27 FAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIET-- 84
Query: 65 PERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCH 124
+ Y+V EY R + + +Q+++ + YCH
Sbjct: 85 --------------EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 125 VNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGAT 184
++HRD+K NLL+D + N+K+ADFG + F++ N L + Y PEL G
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF--GNKLDTFCGSPPYAAPELFQGKK 188
Query: 185 KYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNH 244
GP VD+WS+G I L++G G+N E E + G ++P Y
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL-----------RERVLRGKYRIPFY-- 235
Query: 245 FKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQR 281
LL+K L+L+PS+R
Sbjct: 236 -----------------MSTDCENLLKKFLILNPSKR 255
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 128/257 (49%), Gaps = 38/257 (14%)
Query: 52 NVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIK 110
N+I L +IV P + +VFE++++ D L T I+
Sbjct: 93 NIITLADIVKDPVSR--------------TPALVFEHVNNTDFKQLYQT----LTDYDIR 134
Query: 111 CYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG-NLKLADFGLARSFSYDHNNTLTNRV 169
YM ++L L YCH ++HRD+K N++ID+E L+L D+GLA Y RV
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE--FYHPGQEYNVRV 192
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIFELCGSP 228
+ +++ PELL+ Y ++DMWS+GC+ A ++ K P G + +QL +I ++ G+
Sbjct: 193 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 252
Query: 229 DETIWPGVSKM-----PAYNHFKPSRTMKRRVREVFRHFDRH------ALELLEKMLMLD 277
D ++ + K P +N + KR R F H + AL+ L+K+L D
Sbjct: 253 D--LYDYIDKYNIELDPRFNDILGRHSRKRWER--FVHSENQHLVSPEALDFLDKLLRYD 308
Query: 278 PSQRISAKDALDSEYFW 294
R++A++A++ YF+
Sbjct: 309 HQSRLTAREAMEHPYFY 325
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 140/303 (46%), Gaps = 70/303 (23%)
Query: 7 QVFMAREIKTGE-----IVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVT 61
+V + ++ TG+ +++ ++++ +KE +RE+++LK+L H N+ KL E
Sbjct: 41 EVILCKDKITGQECAVKVISKRQVKQKTDKESL----LREVQLLKQLDHPNIXKLYEFFE 96
Query: 62 SPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
G G Y E D + R RF+ ++Q+L+G+
Sbjct: 97 DKGY----------FYLVGEVYTGGELFDE----IISRK--RFSEVDAARIIRQVLSGIT 140
Query: 122 YCHVNQVLHRDIKGSNLLIDN---EGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPE 178
Y H N+++HRD+K NLL+++ + N+++ DFGL+ F + + +++ T +Y PE
Sbjct: 141 YXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKXKDKIGTAYYIAPE 198
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI------FELCGSPDETI 232
+L G Y D+WS G I LL+G P G NE + L K+ FEL P
Sbjct: 199 VLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFEL---PQ--- 250
Query: 233 WPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEY 292
W VS+ A +L+ K L PS RISA+DALD E+
Sbjct: 251 WKKVSE--------------------------SAKDLIRKXLTYVPSXRISARDALDHEW 284
Query: 293 FWT 295
T
Sbjct: 285 IQT 287
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 121/277 (43%), Gaps = 48/277 (17%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPG 64
++V +AR I TG+ VA++ I RE++I+K L H N++KL E++ +
Sbjct: 27 FAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIET-- 84
Query: 65 PERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCH 124
+ Y+V EY R + + +Q+++ + YCH
Sbjct: 85 --------------EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 125 VNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGAT 184
++HRD+K NLL+D + N+K+ADFG + F++ N L + Y PEL G
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF--GNKLDTFCGSPPYAAPELFQGKK 188
Query: 185 KYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNH 244
GP VD+WS+G I L++G G+N E E + G ++P Y
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL-----------RERVLRGKYRIPFY-- 235
Query: 245 FKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQR 281
LL+K L+L+PS+R
Sbjct: 236 -----------------MSTDCENLLKKFLILNPSKR 255
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 120/277 (43%), Gaps = 48/277 (17%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPG 64
++V +AR I TG+ VA+K I RE++I+K L H N++KL E++ +
Sbjct: 27 FAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIET-- 84
Query: 65 PERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCH 124
+ Y+V EY R + + +Q+++ + YCH
Sbjct: 85 --------------EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 125 VNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGAT 184
++HRD+K NLL+D + N+K+ADFG + F++ N L Y PEL G
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF--GNKLDAFCGAPPYAAPELFQGKK 188
Query: 185 KYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNH 244
GP VD+WS+G I L++G G+N E E + G ++P Y
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL-----------RERVLRGKYRIPFY-- 235
Query: 245 FKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQR 281
LL+K L+L+PS+R
Sbjct: 236 -----------------MSTDCENLLKKFLILNPSKR 255
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 121/277 (43%), Gaps = 48/277 (17%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPG 64
++V +AR I TG+ VA++ I RE++I+K L H N++KL E++ +
Sbjct: 27 FAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIET-- 84
Query: 65 PERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCH 124
+ Y+V EY R + + +Q+++ + YCH
Sbjct: 85 --------------EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 125 VNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGAT 184
++HRD+K NLL+D + N+K+ADFG + F++ N L + Y PEL G
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF--GNKLDEFCGSPPYAAPELFQGKK 188
Query: 185 KYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNH 244
GP VD+WS+G I L++G G+N E E + G ++P Y
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL-----------RERVLRGKYRIPFY-- 235
Query: 245 FKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQR 281
LL+K L+L+PS+R
Sbjct: 236 -----------------MSTDCENLLKKFLILNPSKR 255
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 104/222 (46%), Gaps = 26/222 (11%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPG 64
++V +AR + TG VA+K I RE++I+K L H N++KL E++ +
Sbjct: 28 FAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIET-- 85
Query: 65 PERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCH 124
+ Y+V EY R + + +Q+++ + YCH
Sbjct: 86 --------------EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 131
Query: 125 VNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLW----YRPPELL 180
++HRD+K NLL+D + N+K+ADFG + F T+ N++ T Y PEL
Sbjct: 132 QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEF------TVGNKLDTFCGSPPYAAPELF 185
Query: 181 LGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIF 222
G GP VD+WS+G I L++G G+N E ++
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 227
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 119/277 (42%), Gaps = 48/277 (17%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPG 64
++V +AR I TG+ VA+K I RE++I K L H N++KL E++ +
Sbjct: 27 FAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIET-- 84
Query: 65 PERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCH 124
+ Y+V EY R + + +Q+++ + YCH
Sbjct: 85 --------------EKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCH 130
Query: 125 VNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGAT 184
++HRD+K NLL+D + N+K+ADFG + F++ N L Y PEL G
Sbjct: 131 QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTF--GNKLDAFCGAPPYAAPELFQGKK 188
Query: 185 KYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNH 244
GP VD+WS+G I L++G G+N E E + G ++P Y
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL-----------RERVLRGKYRIPFYX- 236
Query: 245 FKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQR 281
LL+K L+L+PS+R
Sbjct: 237 ------------------STDCENLLKKFLILNPSKR 255
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 22/220 (10%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPG 64
++V +AR I TG+ VA+K I RE++I+K L H N++KL E++ +
Sbjct: 20 FAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIET-- 77
Query: 65 PERDEQGRPDGNKYRGSTYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHY 122
+ Y+V EY L ++ + + +Q+++ + Y
Sbjct: 78 --------------EKTLYLVMEYASGGEVFDYLVAHGWMK--EKEARAKFRQIVSAVQY 121
Query: 123 CHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLG 182
CH ++HRD+K NLL+D + N+K+ADFG + F++ N L + Y PEL G
Sbjct: 122 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF--GNKLDTFCGSPPYAAPELFQG 179
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIF 222
GP VD+WS+G I L++G G+N E ++
Sbjct: 180 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 219
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 104/222 (46%), Gaps = 26/222 (11%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPG 64
++V +AR I TG VA+K I RE++I+K L H N++KL E++ +
Sbjct: 25 FAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIET-- 82
Query: 65 PERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCH 124
+ Y++ EY R + + +Q+++ + YCH
Sbjct: 83 --------------EKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH 128
Query: 125 VNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLW----YRPPELL 180
+++HRD+K NLL+D + N+K+ADFG + F T+ ++ T Y PEL
Sbjct: 129 QKRIVHRDLKAENLLLDADMNIKIADFGFSNEF------TVGGKLDTFCGSPPYAAPELF 182
Query: 181 LGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIF 222
G GP VD+WS+G I L++G G+N E ++
Sbjct: 183 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 224
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 130/286 (45%), Gaps = 49/286 (17%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V ++ T + A+K I + K T +RE+++LKKL H N++KL EI+ E
Sbjct: 37 EVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEIL-----E 91
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
G Y G E D + R RF+ +KQ+ +G+ Y H +
Sbjct: 92 DSSSFYIVGELYTGG-----ELFDE----IIKRK--RFSEHDAARIIKQVFSGITYMHKH 140
Query: 127 QVLHRDIKGSNLLIDN---EGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
++HRD+K N+L+++ + ++K+ DFGL+ F N + +R+ T +Y PE+L G
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ--QNTKMKDRIGTAYYIAPEVLRGT 198
Query: 184 TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYN 243
Y D+WS G I LL+G P GKNE + L ++ + D W +S
Sbjct: 199 --YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISD----- 251
Query: 244 HFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD 289
A +L+ KML PS RI+A L+
Sbjct: 252 ---------------------DAKDLIRKMLTFHPSLRITATQCLE 276
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 130/286 (45%), Gaps = 49/286 (17%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V ++ T + A+K I + K T +RE+++LKKL H N++KL EI+ E
Sbjct: 37 EVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEIL-----E 91
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
G Y G E D + R RF+ +KQ+ +G+ Y H +
Sbjct: 92 DSSSFYIVGELYTGG-----ELFDE----IIKRK--RFSEHDAARIIKQVFSGITYMHKH 140
Query: 127 QVLHRDIKGSNLLIDN---EGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
++HRD+K N+L+++ + ++K+ DFGL+ F N + +R+ T +Y PE+L G
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ--QNTKMKDRIGTAYYIAPEVLRGT 198
Query: 184 TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYN 243
Y D+WS G I LL+G P GKNE + L ++ + D W +S
Sbjct: 199 --YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISD----- 251
Query: 244 HFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD 289
A +L+ KML PS RI+A L+
Sbjct: 252 ---------------------DAKDLIRKMLTFHPSLRITATQCLE 276
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 132/254 (51%), Gaps = 34/254 (13%)
Query: 52 NVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIK 110
N++KL +IV RD+ + + ++FEY+++ D L P L T I+
Sbjct: 88 NIVKLLDIV------RDQHSK--------TPSLIFEYVNNTDFKVLY--PTL--TDYDIR 129
Query: 111 CYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNE-GNLKLADFGLARSFSYDHNNTLTNRV 169
Y+ +LL L YCH ++HRD+K N++ID+E L+L D+GLA Y RV
Sbjct: 130 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE--FYHPGKEYNVRV 187
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIFELCGSP 228
+ +++ PELL+ Y ++DMWS+GC+FA ++ K P G + +QL KI ++ G+
Sbjct: 188 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 247
Query: 229 DETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHF----DRH-----ALELLEKMLMLDPS 279
++ ++ + + R R+ + F ++H A++ L+K+L D
Sbjct: 248 GLNVYLNKYRIELDPQLEA--LVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQ 305
Query: 280 QRISAKDALDSEYF 293
+R++A +A+ YF
Sbjct: 306 ERLTALEAMTHPYF 319
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 132/254 (51%), Gaps = 34/254 (13%)
Query: 52 NVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIK 110
N++KL +IV RD+ + + ++FEY+++ D L P L T I+
Sbjct: 87 NIVKLLDIV------RDQHSK--------TPSLIFEYVNNTDFKVLY--PTL--TDYDIR 128
Query: 111 CYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNE-GNLKLADFGLARSFSYDHNNTLTNRV 169
Y+ +LL L YCH ++HRD+K N++ID+E L+L D+GLA Y RV
Sbjct: 129 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE--FYHPGKEYNVRV 186
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIFELCGSP 228
+ +++ PELL+ Y ++DMWS+GC+FA ++ K P G + +QL KI ++ G+
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 229 DETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHF----DRH-----ALELLEKMLMLDPS 279
++ ++ + + R R+ + F ++H A++ L+K+L D
Sbjct: 247 GLNVYLNKYRIELDPQLEA--LVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQ 304
Query: 280 QRISAKDALDSEYF 293
+R++A +A+ YF
Sbjct: 305 ERLTALEAMTHPYF 318
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 132/254 (51%), Gaps = 34/254 (13%)
Query: 52 NVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIK 110
N++KL +IV RD+ + + ++FEY+++ D L P L T I+
Sbjct: 89 NIVKLLDIV------RDQHSK--------TPSLIFEYVNNTDFKVLY--PTL--TDYDIR 130
Query: 111 CYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNE-GNLKLADFGLARSFSYDHNNTLTNRV 169
Y+ +LL L YCH ++HRD+K N++ID+E L+L D+GLA Y RV
Sbjct: 131 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE--FYHPGKEYNVRV 188
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIFELCGSP 228
+ +++ PELL+ Y ++DMWS+GC+FA ++ K P G + +QL KI ++ G+
Sbjct: 189 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 248
Query: 229 DETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHF----DRH-----ALELLEKMLMLDPS 279
++ ++ + + R R+ + F ++H A++ L+K+L D
Sbjct: 249 GLNVYLNKYRIELDPQLEA--LVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQ 306
Query: 280 QRISAKDALDSEYF 293
+R++A +A+ YF
Sbjct: 307 ERLTALEAMTHPYF 320
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V +A T E VA+K + M + P +EI I K L HENV+K
Sbjct: 21 EVQLAVNRVTEEAVAVKIVDMKRAVDC-PENIKKEICINKMLNHENVVKFY--------- 70
Query: 67 RDEQGRPDGNKYRGST-YMVFEYMDHDLTGLADR--PGLRFTVPQIKCYMKQLLTGLHYC 123
G++ G+ Y+ EY L DR P + P + + QL+ G+ Y
Sbjct: 71 --------GHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 124 HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPELLLG 182
H + HRDIK NLL+D NLK++DFGLA F Y++ L N++ TL Y PELL
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY 242
+ VD+WS G + +L G+ LP ++ + Y
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE---------------------Y 217
Query: 243 NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPL 298
+ +K +T ++ D L LL K+L+ +PS RI+ D + + ++ PL
Sbjct: 218 SDWKEKKTY----LNPWKKIDSAPLALLHKILVENPSARITIPD-IKKDRWYNKPL 268
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 132/254 (51%), Gaps = 34/254 (13%)
Query: 52 NVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIK 110
N++KL +IV RD+ + + ++FEY+++ D L P L T I+
Sbjct: 87 NIVKLLDIV------RDQHSK--------TPSLIFEYVNNTDFKVLY--PTL--TDYDIR 128
Query: 111 CYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNE-GNLKLADFGLARSFSYDHNNTLTNRV 169
Y+ +LL L YCH ++HRD+K N++ID+E L+L D+GLA Y RV
Sbjct: 129 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE--FYHPGKEYNVRV 186
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIFELCGSP 228
+ +++ PELL+ Y ++DMWS+GC+FA ++ K P G + +QL KI ++ G+
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 229 DETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHF----DRH-----ALELLEKMLMLDPS 279
++ ++ + + R R+ + F ++H A++ L+K+L D
Sbjct: 247 GLNVYLNKYRIELDPQLEA--LVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQ 304
Query: 280 QRISAKDALDSEYF 293
+R++A +A+ YF
Sbjct: 305 ERLTALEAMTHPYF 318
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 131/254 (51%), Gaps = 34/254 (13%)
Query: 52 NVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIK 110
N++KL +IV RD+ + ++FEY+++ D L P L T I+
Sbjct: 88 NIVKLLDIV------RDQHSKTPS--------LIFEYVNNTDFKVLY--PTL--TDYDIR 129
Query: 111 CYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNE-GNLKLADFGLARSFSYDHNNTLTNRV 169
Y+ +LL L YCH ++HRD+K N++ID+E L+L D+GLA Y RV
Sbjct: 130 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE--FYHPGKEYNVRV 187
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIFELCGSP 228
+ +++ PELL+ Y ++DMWS+GC+FA ++ K P G + +QL KI ++ G+
Sbjct: 188 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 247
Query: 229 DETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHF----DRH-----ALELLEKMLMLDPS 279
++ ++ + + R R+ + F ++H A++ L+K+L D
Sbjct: 248 GLNVYLNKYRIELDPQLEA--LVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQ 305
Query: 280 QRISAKDALDSEYF 293
+R++A +A+ YF
Sbjct: 306 ERLTALEAMTHPYF 319
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 134/297 (45%), Gaps = 55/297 (18%)
Query: 2 LVCI------SQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIK 55
+VC+ +V ++ T + A+K I + K T +RE+++LKKL H N++K
Sbjct: 26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 56 LKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQ 115
L EI+ E G Y G E D + R RF+ +KQ
Sbjct: 86 LFEIL-----EDSSSFYIVGELYTGG-----ELFDE----IIKRK--RFSEHDAARIIKQ 129
Query: 116 LLTGLHYCHVNQVLHRDIKGSNLLIDN---EGNLKLADFGLARSFSYDHNNTLTNRVITL 172
+ +G+ Y H + ++HRD+K N+L+++ + ++K+ DFGL+ F N + +R+ T
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ--QNTKMKDRIGTA 187
Query: 173 WYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETI 232
+Y PE+L G Y D+WS G I LL+G P GKNE + L ++ + D
Sbjct: 188 YYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQ 245
Query: 233 WPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD 289
W +S A +L+ KML PS RI+A L+
Sbjct: 246 WRTISD--------------------------DAKDLIRKMLTFHPSLRITATQCLE 276
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V +A T E VA+K + M + P +EI I K L HENV+K
Sbjct: 22 EVQLAVNRVTEEAVAVKIVDMKRAVDC-PENIKKEICINKMLNHENVVKFY--------- 71
Query: 67 RDEQGRPDGNKYRGST-YMVFEYMDHDLTGLADR--PGLRFTVPQIKCYMKQLLTGLHYC 123
G++ G+ Y+ EY L DR P + P + + QL+ G+ Y
Sbjct: 72 --------GHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 124 HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPELLLG 182
H + HRDIK NLL+D NLK++DFGLA F Y++ L N++ TL Y PELL
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY 242
+ VD+WS G + +L G+ LP ++ + Y
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE---------------------Y 218
Query: 243 NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPL 298
+ +K +T ++ D L LL K+L+ +PS RI+ D + + ++ PL
Sbjct: 219 SDWKEKKTY----LNPWKKIDSAPLALLHKILVENPSARITIPD-IKKDRWYNKPL 269
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 132/254 (51%), Gaps = 34/254 (13%)
Query: 52 NVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIK 110
N++KL +IV RD+ + + ++FEY+++ D L P L T I+
Sbjct: 87 NIVKLLDIV------RDQHSK--------TPSLIFEYVNNTDFKVLY--PTL--TDYDIR 128
Query: 111 CYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNE-GNLKLADFGLARSFSYDHNNTLTNRV 169
Y+ +LL L YCH ++HRD+K N++ID+E L+L D+GLA Y RV
Sbjct: 129 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE--FYHPGKEYNVRV 186
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIFELCGSP 228
+ +++ PELL+ Y ++DMWS+GC+FA ++ K P G + +QL KI ++ G+
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 229 DETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHF----DRH-----ALELLEKMLMLDPS 279
++ ++ + + R R+ + F ++H A++ L+K+L D
Sbjct: 247 GLNVYLNKYRIELDPQLEA--LVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQ 304
Query: 280 QRISAKDALDSEYF 293
+R++A +A+ YF
Sbjct: 305 ERLTALEAMTHPYF 318
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 132/254 (51%), Gaps = 34/254 (13%)
Query: 52 NVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIK 110
N++KL +IV RD+ + + ++FEY+++ D L P L T I+
Sbjct: 87 NIVKLLDIV------RDQHSK--------TPSLIFEYVNNTDFKVLY--PTL--TDYDIR 128
Query: 111 CYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNE-GNLKLADFGLARSFSYDHNNTLTNRV 169
Y+ +LL L YCH ++HRD+K N++ID+E L+L D+GLA Y RV
Sbjct: 129 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE--FYHPGKEYNVRV 186
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIFELCGSP 228
+ +++ PELL+ Y ++DMWS+GC+FA ++ K P G + +QL KI ++ G+
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 229 DETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHF----DRH-----ALELLEKMLMLDPS 279
++ ++ + + R R+ + F ++H A++ L+K+L D
Sbjct: 247 GLNVYLNKYRIELDPQLEA--LVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQ 304
Query: 280 QRISAKDALDSEYF 293
+R++A +A+ YF
Sbjct: 305 ERLTALEAMTHPYF 318
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 132/254 (51%), Gaps = 34/254 (13%)
Query: 52 NVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIK 110
N++KL +IV RD+ + + ++FEY+++ D L P L T I+
Sbjct: 87 NIVKLLDIV------RDQHSK--------TPSLIFEYVNNTDFKVLY--PTL--TDYDIR 128
Query: 111 CYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNE-GNLKLADFGLARSFSYDHNNTLTNRV 169
Y+ +LL L YCH ++HRD+K N++ID+E L+L D+GLA Y RV
Sbjct: 129 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE--FYHPGKEYNVRV 186
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIFELCGSP 228
+ +++ PELL+ Y ++DMWS+GC+FA ++ K P G + +QL KI ++ G+
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 229 DETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHF----DRH-----ALELLEKMLMLDPS 279
++ ++ + + R R+ + F ++H A++ L+K+L D
Sbjct: 247 GLNVYLNKYRIELDPQLEA--LVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQ 304
Query: 280 QRISAKDALDSEYF 293
+R++A +A+ YF
Sbjct: 305 ERLTALEAMTHPYF 318
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 132/254 (51%), Gaps = 34/254 (13%)
Query: 52 NVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIK 110
N++KL +IV RD+ + + ++FEY+++ D L P L T I+
Sbjct: 87 NIVKLLDIV------RDQHSK--------TPSLIFEYVNNTDFKVLY--PTL--TDYDIR 128
Query: 111 CYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNE-GNLKLADFGLARSFSYDHNNTLTNRV 169
Y+ +LL L YCH ++HRD+K N++ID+E L+L D+GLA Y RV
Sbjct: 129 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE--FYHPGKEYNVRV 186
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIFELCGSP 228
+ +++ PELL+ Y ++DMWS+GC+FA ++ K P G + +QL KI ++ G+
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 229 DETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHF----DRH-----ALELLEKMLMLDPS 279
++ ++ + + R R+ + F ++H A++ L+K+L D
Sbjct: 247 GLNVYLNKYRIELDPQLEA--LVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQ 304
Query: 280 QRISAKDALDSEYF 293
+R++A +A+ YF
Sbjct: 305 ERLTALEAMTHPYF 318
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 26/221 (11%)
Query: 6 SQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGP 65
++V +AR I TG VA+K I RE++I+K L H N++KL E++ +
Sbjct: 29 AKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIET--- 85
Query: 66 ERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHV 125
+ Y++ EY R + + +Q+++ + YCH
Sbjct: 86 -------------EKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 132
Query: 126 NQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLW----YRPPELLL 181
+++HRD+K NLL+D + N+K+ADFG + F T+ ++ Y PEL
Sbjct: 133 KRIVHRDLKAENLLLDADMNIKIADFGFSNEF------TVGGKLDAFCGAPPYAAPELFQ 186
Query: 182 GATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIF 222
G GP VD+WS+G I L++G G+N E ++
Sbjct: 187 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 227
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 133/295 (45%), Gaps = 59/295 (20%)
Query: 16 TGEIVALKKIRMDNEKEGFPITAIR-EIKILKKLQHENVIKLKEIVTSPGPERDEQGRPD 74
TG VA+K + + + IR EI+ LK +H ++IKL +++++P
Sbjct: 40 TGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPS---------- 89
Query: 75 GNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDI 133
+MV EY+ +L + G R + + +Q+L+G+ YCH + V+HRD+
Sbjct: 90 ------DIFMVMEYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCHRHMVVHRDL 142
Query: 134 KGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMW 193
K N+L+D N K+ADFGL+ S L + Y PE++ G GP VD+W
Sbjct: 143 KPENVLLDAHMNAKIADFGLSNMMS--DGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIW 200
Query: 194 SVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKR 253
S G I LL G LP + + + +F + I G+ P Y PS
Sbjct: 201 SSGVILYALLCGT--LPFDD--DHVPTLF-------KKICDGIFYTPQY--LNPS----- 242
Query: 254 RVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLPKY 308
+ LL+ ML +DP +R + KD + E+F D LPKY
Sbjct: 243 ------------VISLLKHMLQVDPMKRATIKDIREHEWFKQD--------LPKY 277
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 131/281 (46%), Gaps = 50/281 (17%)
Query: 7 QVFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGP 65
+V +A KT + VALK I R +K + REI LK L+H ++IKL +++T+P
Sbjct: 24 KVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPT- 82
Query: 66 ERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHV 125
MV EY +L R T + + + +Q++ + YCH
Sbjct: 83 ---------------DIVMVIEYAGGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCHR 126
Query: 126 NQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATK 185
++++HRD+K NLL+D+ N+K+ADFGL+ + N L + Y PE++ G
Sbjct: 127 HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMT--DGNFLKTSCGSPNYAAPEVINGKLY 184
Query: 186 YGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHF 245
GP VD+WS G + +L G+ LP +E + +F+ S V MP +
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGR--LPFDDEF--IPNLFKKVNS-------CVYVMPDF--L 231
Query: 246 KPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKD 286
P A L+ +M++ DP QRI+ ++
Sbjct: 232 SPG-----------------AQSLIRRMIVADPMQRITIQE 255
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V +A T E VA+K + M + P +EI I K L HENV+K
Sbjct: 22 EVQLAVNRVTEEAVAVKIVDMKRAVDC-PENIKKEICINKMLNHENVVKFY--------- 71
Query: 67 RDEQGRPDGNKYRGST-YMVFEYMDHDLTGLADR--PGLRFTVPQIKCYMKQLLTGLHYC 123
G++ G+ Y+ EY L DR P + P + + QL+ G+ Y
Sbjct: 72 --------GHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 124 HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPELLLG 182
H + HRDIK NLL+D NLK++DFGLA F Y++ L N++ TL Y PELL
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY 242
+ VD+WS G + +L G+ LP ++ + Y
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE---------------------Y 218
Query: 243 NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPL 298
+ +K +T ++ D L LL K+L+ +PS RI+ D + + ++ PL
Sbjct: 219 SDWKEKKTYLNP----WKKIDSAPLALLHKILVENPSARITIPD-IKKDRWYNKPL 269
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V +A T E VA+K + M + P +EI I K L HENV+K
Sbjct: 22 EVQLAVNRVTEEAVAVKIVDMKRAVDC-PENIKKEICINKMLNHENVVKFY--------- 71
Query: 67 RDEQGRPDGNKYRGST-YMVFEYMDHDLTGLADR--PGLRFTVPQIKCYMKQLLTGLHYC 123
G++ G+ Y+ EY L DR P + P + + QL+ G+ Y
Sbjct: 72 --------GHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 124 HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPELLLG 182
H + HRDIK NLL+D NLK++DFGLA F Y++ L N++ TL Y PELL
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY 242
+ VD+WS G + +L G+ LP ++ + Y
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE---------------------Y 218
Query: 243 NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPL 298
+ +K +T ++ D L LL K+L+ +PS RI+ D + + ++ PL
Sbjct: 219 SDWKEKKTYLNP----WKKIDSAPLALLHKILVENPSARITIPD-IKKDRWYNKPL 269
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V +A T E VA+K + M + P +EI I K L HENV+K
Sbjct: 22 EVQLAVNRVTEEAVAVKIVDMKRAVDC-PENIKKEICINKMLNHENVVKFY--------- 71
Query: 67 RDEQGRPDGNKYRGST-YMVFEYMDHDLTGLADR--PGLRFTVPQIKCYMKQLLTGLHYC 123
G++ G+ Y+ EY L DR P + P + + QL+ G+ Y
Sbjct: 72 --------GHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 124 HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPELLLG 182
H + HRDIK NLL+D NLK++DFGLA F Y++ L N++ TL Y PELL
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY 242
+ VD+WS G + +L G+ LP ++ + Y
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE---------------------Y 218
Query: 243 NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPL 298
+ +K +T ++ D L LL K+L+ +PS RI+ D + + ++ PL
Sbjct: 219 SDWKEKKTYLNP----WKKIDSAPLALLHKILVENPSARITIPD-IKKDRWYNKPL 269
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 131/254 (51%), Gaps = 34/254 (13%)
Query: 52 NVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIK 110
N++KL +IV RD+ + + ++FEY+++ D L P L T I+
Sbjct: 108 NIVKLLDIV------RDQHSK--------TPSLIFEYVNNTDFKVLY--PTL--TDYDIR 149
Query: 111 CYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNE-GNLKLADFGLARSFSYDHNNTLTNRV 169
Y+ +LL L YCH ++HRD+K N++ID+E L+L D+GLA Y RV
Sbjct: 150 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE--FYHPGKEYNVRV 207
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIFELCGSP 228
+ +++ PELL+ Y ++DMWS+GC+FA ++ K P G + +QL KI ++ G+
Sbjct: 208 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 267
Query: 229 DETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHF----DRH-----ALELLEKMLMLDPS 279
+ ++ + + R R+ + F ++H A++ L+K+L D
Sbjct: 268 GLNAYLNKYRIELDPQLEA--LVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQ 325
Query: 280 QRISAKDALDSEYF 293
+R++A +A+ YF
Sbjct: 326 ERLTALEAMTHPYF 339
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V +A T E VA+K + M + P +EI I K L HENV+K
Sbjct: 21 EVQLAVNRVTEEAVAVKIVDMKRAVDC-PENIKKEIXINKMLNHENVVKFY--------- 70
Query: 67 RDEQGRPDGNKYRGST-YMVFEYMDHDLTGLADR--PGLRFTVPQIKCYMKQLLTGLHYC 123
G++ G+ Y+ EY L DR P + P + + QL+ G+ Y
Sbjct: 71 --------GHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 124 HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPELLLG 182
H + HRDIK NLL+D NLK++DFGLA F Y++ L N++ TL Y PELL
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY 242
+ VD+WS G + +L G+ LP ++ + Y
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE---------------------Y 217
Query: 243 NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPL 298
+ +K +T ++ D L LL K+L+ +PS RI+ D + + ++ PL
Sbjct: 218 SDWKEKKTYLNP----WKKIDSAPLALLHKILVENPSARITIPD-IKKDRWYNKPL 268
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 123/266 (46%), Gaps = 53/266 (19%)
Query: 32 EGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMD- 90
E F EI +LK L H N+IKL ++ KY Y+V E+ +
Sbjct: 87 EKFHEEIYNEISLLKSLDHPNIIKLFDVFEDK-------------KY---FYLVTEFYEG 130
Query: 91 -HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG---NL 146
+ +R +F MKQ+L+G+ Y H + ++HRDIK N+L++N+ N+
Sbjct: 131 GELFEQIINRH--KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNI 188
Query: 147 KLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK 206
K+ DFGL+ FS D+ L +R+ T +Y PE+L KY D+WS G I LL G
Sbjct: 189 KIVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVL--KKKYNEKCDVWSCGVIMYILLCGY 244
Query: 207 PILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHA 266
P G+N D+ I V K Y F +++ A
Sbjct: 245 PPFGGQN---------------DQDIIKKVEKGKYYFDFND-----------WKNISDEA 278
Query: 267 LELLEKMLMLDPSQRISAKDALDSEY 292
EL++ ML D ++R +A++AL+S +
Sbjct: 279 KELIKLMLTYDYNKRCTAEEALNSRW 304
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 128/291 (43%), Gaps = 51/291 (17%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V +A T E VA+K + M + P +EI I K L HENV+K
Sbjct: 22 EVQLAVNRVTEEAVAVKIVDMKRAVDC-PENIKKEIXINKMLNHENVVKFY--------- 71
Query: 67 RDEQGRPDGNKYRGST-YMVFEYMDHDLTGLADR--PGLRFTVPQIKCYMKQLLTGLHYC 123
G++ G+ Y+ EY L DR P + P + + QL+ G+ Y
Sbjct: 72 --------GHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 124 HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPELLLG 182
H + HRDIK NLL+D NLK++DFGLA F Y++ L N++ TL Y PELL
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 181
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY 242
+ VD+WS G + +L G+ LP ++ + Y
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE---------------------Y 218
Query: 243 NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
+ +K +T ++ D L LL K+L+ +PS RI+ D ++
Sbjct: 219 SDWKEKKTYLNP----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 265
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 128/291 (43%), Gaps = 51/291 (17%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V +A T E VA+K + M + P +EI I K L HENV+K
Sbjct: 21 EVQLAVNRVTEEAVAVKIVDMKRAVDC-PENIKKEIXINKMLNHENVVKFY--------- 70
Query: 67 RDEQGRPDGNKYRGST-YMVFEYMDHDLTGLADR--PGLRFTVPQIKCYMKQLLTGLHYC 123
G++ G+ Y+ EY L DR P + P + + QL+ G+ Y
Sbjct: 71 --------GHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 124 HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPELLLG 182
H + HRDIK NLL+D NLK++DFGLA F Y++ L N++ TL Y PELL
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY 242
+ VD+WS G + +L G+ LP ++ + Y
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE---------------------Y 217
Query: 243 NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
+ +K +T ++ D L LL K+L+ +PS RI+ D ++
Sbjct: 218 SDWKEKKTYLNP----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 264
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V +A T E VA+K + M + P +EI I K L HENV+K
Sbjct: 21 EVQLAVNRVTEEAVAVKIVDMKRAVDC-PENIKKEICINKMLNHENVVKFY--------- 70
Query: 67 RDEQGRPDGNKYRGST-YMVFEYMDHDLTGLADR--PGLRFTVPQIKCYMKQLLTGLHYC 123
G++ G+ Y+ EY L DR P + P + + QL+ G+ Y
Sbjct: 71 --------GHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 124 HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPELLLG 182
H + HRDIK NLL+D NLK++DFGLA F Y++ L N++ TL Y PELL
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY 242
+ VD+WS G + +L G+ LP ++ + Y
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE---------------------Y 217
Query: 243 NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPL 298
+ +K +T ++ D L LL K+L+ +PS RI+ D + + ++ PL
Sbjct: 218 SDWKEKKTYLNP----WKKIDSAPLALLHKILVENPSARITIPD-IKKDRWYNKPL 268
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V +A T E VA+K + M + P +EI I K L HENV+K
Sbjct: 20 EVQLAVNRVTEEAVAVKIVDMKRAVDC-PENIKKEICINKMLNHENVVKFY--------- 69
Query: 67 RDEQGRPDGNKYRGST-YMVFEYMDHDLTGLADR--PGLRFTVPQIKCYMKQLLTGLHYC 123
G++ G+ Y+ EY L DR P + P + + QL+ G+ Y
Sbjct: 70 --------GHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 119
Query: 124 HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPELLLG 182
H + HRDIK NLL+D NLK++DFGLA F Y++ L N++ TL Y PELL
Sbjct: 120 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 179
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY 242
+ VD+WS G + +L G+ LP ++ + Y
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE---------------------Y 216
Query: 243 NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPL 298
+ +K +T ++ D L LL K+L+ +PS RI+ D + + ++ PL
Sbjct: 217 SDWKEKKTYLNP----WKKIDSAPLALLHKILVENPSARITIPD-IKKDRWYNKPL 267
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V +A T E VA+K + M + P +EI I K L HENV+K
Sbjct: 21 EVQLAVNRVTEEAVAVKIVDMKRAVDC-PENIKKEICINKMLNHENVVKFY--------- 70
Query: 67 RDEQGRPDGNKYRGST-YMVFEYMDHDLTGLADR--PGLRFTVPQIKCYMKQLLTGLHYC 123
G++ G+ Y+ EY L DR P + P + + QL+ G+ Y
Sbjct: 71 --------GHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 124 HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPELLLG 182
H + HRDIK NLL+D NLK++DFGLA F Y++ L N++ TL Y PELL
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY 242
+ VD+WS G + +L G+ LP ++ + Y
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE---------------------Y 217
Query: 243 NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPL 298
+ +K +T ++ D L LL K+L+ +PS RI+ D + + ++ PL
Sbjct: 218 SDWKEKKTYLNP----WKKIDSAPLALLHKILVENPSARITIPD-IKKDRWYNKPL 268
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 128/291 (43%), Gaps = 51/291 (17%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V +A T E VA+K + M + P +EI I K L HENV+K
Sbjct: 22 EVQLAVNRVTEEAVAVKIVDMKRAVDC-PENIKKEICINKMLNHENVVKFY--------- 71
Query: 67 RDEQGRPDGNKYRGST-YMVFEYMDHDLTGLADR--PGLRFTVPQIKCYMKQLLTGLHYC 123
G++ G+ Y+ EY L DR P + P + + QL+ G+ Y
Sbjct: 72 --------GHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 124 HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPELLLG 182
H + HRDIK NLL+D NLK++DFGLA F Y++ L N++ TL Y PELL
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY 242
+ VD+WS G + +L G+ LP ++ + Y
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE---------------------Y 218
Query: 243 NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
+ +K +T ++ D L LL K+L+ +PS RI+ D ++
Sbjct: 219 SDWKEKKTYLNP----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 265
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 132/296 (44%), Gaps = 52/296 (17%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V +A T E VA+K + M + P +EI I K L HENV+K
Sbjct: 21 EVQLAVNRVTEEAVAVKIVDMKRAVDC-PENIKKEICINKMLNHENVVKFY--------- 70
Query: 67 RDEQGRPDGNKYRGST-YMVFEYMDHDLTGLADR--PGLRFTVPQIKCYMKQLLTGLHYC 123
G++ G+ Y+ EY L DR P + P + + QL+ G+ Y
Sbjct: 71 --------GHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 124 HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPELLLG 182
H + HRDIK NLL+D NLK++DFGLA F Y++ L N++ TL Y PELL
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY 242
+ VD+WS G + +L G+ LP ++ + Y
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE---------------------Y 217
Query: 243 NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPL 298
+ +K +T ++ D L LL K+L+ +PS RI+ D + + ++ PL
Sbjct: 218 SDWKEKKTYLNP----WKKIDSAPLALLHKILVENPSARITIPD-IKKDRWYNKPL 268
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 128/291 (43%), Gaps = 51/291 (17%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V +A T E VA+K + M + P +EI I K L HENV+K
Sbjct: 21 EVQLAVNRVTEEAVAVKIVDMKRAVDC-PENIKKEICINKMLNHENVVKFY--------- 70
Query: 67 RDEQGRPDGNKYRGST-YMVFEYMDHDLTGLADR--PGLRFTVPQIKCYMKQLLTGLHYC 123
G++ G+ Y+ EY L DR P + P + + QL+ G+ Y
Sbjct: 71 --------GHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 124 HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPELLLG 182
H + HRDIK NLL+D NLK++DFGLA F Y++ L N++ TL Y PELL
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY 242
+ VD+WS G + +L G+ LP ++ + Y
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE---------------------Y 217
Query: 243 NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
+ +K +T ++ D L LL K+L+ +PS RI+ D ++
Sbjct: 218 SDWKEKKTYLNP----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 264
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 128/291 (43%), Gaps = 51/291 (17%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V +A T E VA+K + M + P +EI I K L HENV+K
Sbjct: 21 EVQLAVNRVTEEAVAVKIVDMKRAVDC-PENIKKEICINKMLNHENVVKFY--------- 70
Query: 67 RDEQGRPDGNKYRGST-YMVFEYMDHDLTGLADR--PGLRFTVPQIKCYMKQLLTGLHYC 123
G++ G+ Y+ EY L DR P + P + + QL+ G+ Y
Sbjct: 71 --------GHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 124 HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPELLLG 182
H + HRDIK NLL+D NLK++DFGLA F Y++ L N++ TL Y PELL
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY 242
+ VD+WS G + +L G+ LP ++ + Y
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE---------------------Y 217
Query: 243 NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
+ +K +T ++ D L LL K+L+ +PS RI+ D ++
Sbjct: 218 SDWKEKKTYLNP----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 264
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 128/291 (43%), Gaps = 51/291 (17%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V +A T E VA+K + M + P +EI I K L HENV+K
Sbjct: 21 EVQLAVNRVTEEAVAVKIVDMKRAVDC-PENIKKEICINKMLNHENVVKFY--------- 70
Query: 67 RDEQGRPDGNKYRGST-YMVFEYMDHDLTGLADR--PGLRFTVPQIKCYMKQLLTGLHYC 123
G++ G+ Y+ EY L DR P + P + + QL+ G+ Y
Sbjct: 71 --------GHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 124 HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPELLLG 182
H + HRDIK NLL+D NLK++DFGLA F Y++ L N++ TL Y PELL
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY 242
+ VD+WS G + +L G+ LP ++ + Y
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE---------------------Y 217
Query: 243 NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
+ +K +T ++ D L LL K+L+ +PS RI+ D ++
Sbjct: 218 SDWKEKKTYLNP----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 264
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 128/291 (43%), Gaps = 51/291 (17%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V +A T E VA+K + M + P +EI I K L HENV+K
Sbjct: 21 EVQLAVNRVTEEAVAVKIVDMKRAVDC-PENIKKEICINKMLNHENVVKFY--------- 70
Query: 67 RDEQGRPDGNKYRGST-YMVFEYMDHDLTGLADR--PGLRFTVPQIKCYMKQLLTGLHYC 123
G++ G+ Y+ EY L DR P + P + + QL+ G+ Y
Sbjct: 71 --------GHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 124 HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPELLLG 182
H + HRDIK NLL+D NLK++DFGLA F Y++ L N++ TL Y PELL
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY 242
+ VD+WS G + +L G+ LP ++ + Y
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE---------------------Y 217
Query: 243 NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
+ +K +T ++ D L LL K+L+ +PS RI+ D ++
Sbjct: 218 SDWKEKKTYLNP----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 264
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 128/291 (43%), Gaps = 51/291 (17%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V +A T E VA+K + M + P +EI I K L HENV+K
Sbjct: 22 EVQLAVNRVTEEAVAVKIVDMKRAVDC-PENIKKEICINKMLNHENVVKFY--------- 71
Query: 67 RDEQGRPDGNKYRGST-YMVFEYMDHDLTGLADR--PGLRFTVPQIKCYMKQLLTGLHYC 123
G++ G+ Y+ EY L DR P + P + + QL+ G+ Y
Sbjct: 72 --------GHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 124 HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPELLLG 182
H + HRDIK NLL+D NLK++DFGLA F Y++ L N++ TL Y PELL
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY 242
+ VD+WS G + +L G+ LP ++ + Y
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE---------------------Y 218
Query: 243 NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
+ +K +T ++ D L LL K+L+ +PS RI+ D ++
Sbjct: 219 SDWKEKKTYLNP----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 265
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 128/291 (43%), Gaps = 51/291 (17%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V +A T E VA+K + M + P +EI I K L HENV+K
Sbjct: 21 EVQLAVNRVTEEAVAVKIVDMKRAVDC-PENIKKEICINKMLNHENVVKFY--------- 70
Query: 67 RDEQGRPDGNKYRGST-YMVFEYMDHDLTGLADR--PGLRFTVPQIKCYMKQLLTGLHYC 123
G++ G+ Y+ EY L DR P + P + + QL+ G+ Y
Sbjct: 71 --------GHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 124 HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPELLLG 182
H + HRDIK NLL+D NLK++DFGLA F Y++ L N++ TL Y PELL
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY 242
+ VD+WS G + +L G+ LP ++ + Y
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSXQE---------------------Y 217
Query: 243 NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
+ +K +T ++ D L LL K+L+ +PS RI+ D ++
Sbjct: 218 SDWKEKKTYLNP----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 264
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 128/291 (43%), Gaps = 51/291 (17%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V +A T E VA+K + M + P +EI I K L HENV+K
Sbjct: 21 EVQLAVNRVTEEAVAVKIVDMKRAVDC-PENIKKEICINKMLNHENVVKFY--------- 70
Query: 67 RDEQGRPDGNKYRGST-YMVFEYMDHDLTGLADR--PGLRFTVPQIKCYMKQLLTGLHYC 123
G++ G+ Y+ EY L DR P + P + + QL+ G+ Y
Sbjct: 71 --------GHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 124 HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPELLLG 182
H + HRDIK NLL+D NLK++DFGLA F Y++ L N++ TL Y PELL
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY 242
+ VD+WS G + +L G+ LP ++ + Y
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE---------------------Y 217
Query: 243 NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
+ +K +T ++ D L LL K+L+ +PS RI+ D ++
Sbjct: 218 SDWKEKKTYLNP----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 264
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 106/218 (48%), Gaps = 27/218 (12%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE + I+ALK + + EKEG REI+I L+H N++++
Sbjct: 30 VYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD---- 85
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHV 125
R Y++ E+ +L + G RF + +M++L LHYCH
Sbjct: 86 ------------RKRIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCHE 132
Query: 126 NQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI--TLWYRPPELLLGA 183
+V+HRDIK NLL+ +G LK+ADFG + H +L R + TL Y PPE++ G
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFGWSV-----HAPSLRRRXMCGTLDYLPPEMIEGK 187
Query: 184 TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
T + VD+W G + E L G P + E +I
Sbjct: 188 T-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRI 224
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 106/218 (48%), Gaps = 27/218 (12%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE + I+ALK + + EKEG REI+I L+H N++++
Sbjct: 31 VYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD---- 86
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHV 125
R Y++ E+ +L + G RF + +M++L LHYCH
Sbjct: 87 ------------RKRIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCHE 133
Query: 126 NQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI--TLWYRPPELLLGA 183
+V+HRDIK NLL+ +G LK+ADFG + H +L R + TL Y PPE++ G
Sbjct: 134 RKVIHRDIKPENLLMGYKGELKIADFGWSV-----HAPSLRRRXMCGTLDYLPPEMIEGK 188
Query: 184 TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
T + VD+W G + E L G P + E +I
Sbjct: 189 T-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRI 225
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE ++ I+ALK + + EK G RE++I L+H N+++L
Sbjct: 50 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH----- 104
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D + Y++ EY + +F + Y+ +L L YCH
Sbjct: 105 -------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 153
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+ADFG + TL TL Y PPE++ G +
Sbjct: 154 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCG---TLDYLPPEMIEGRM-H 209
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
VD+WS+G + E L GKP E +I
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 244
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 106/218 (48%), Gaps = 27/218 (12%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE + I+ALK + + EKEG REI+I L+H N++++
Sbjct: 30 VYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD---- 85
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHV 125
R Y++ E+ +L + G RF + +M++L LHYCH
Sbjct: 86 ------------RKRIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCHE 132
Query: 126 NQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI--TLWYRPPELLLGA 183
+V+HRDIK NLL+ +G LK+ADFG + H +L R + TL Y PPE++ G
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFGWSV-----HAPSLRRRXMCGTLDYLPPEMIEGK 187
Query: 184 TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
T + VD+W G + E L G P + E +I
Sbjct: 188 T-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRI 224
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 117/258 (45%), Gaps = 54/258 (20%)
Query: 40 REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMD-----HDLT 94
RE I L+H ++++L E +S G YMVFE+MD ++
Sbjct: 75 REASICHMLKHPHIVELLETYSSDG----------------MLYMVFEFMDGADLCFEIV 118
Query: 95 GLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLI---DNEGNLKLADF 151
AD G ++ YM+Q+L L YCH N ++HRD+K N+L+ +N +KL DF
Sbjct: 119 KRAD-AGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDF 177
Query: 152 GLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPG 211
G+A + RV T + PE ++ YG VD+W G I LL+G LP
Sbjct: 178 GVAIQLG-ESGLVAGGRVGTPHFMAPE-VVKREPYGKPVDVWGCGVILFILLSG--CLPF 233
Query: 212 KNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLE 271
E+L E I G KM P + + H A +L+
Sbjct: 234 YGTKERLF----------EGIIKGKYKM------NPRQ---------WSHISESAKDLVR 268
Query: 272 KMLMLDPSQRISAKDALD 289
+MLMLDP++RI+ +AL+
Sbjct: 269 RMLMLDPAERITVYEALN 286
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE ++ I+ALK + + EK G RE++I L+H N+++L
Sbjct: 25 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH----- 79
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D + Y++ EY + +F + Y+ +L L YCH
Sbjct: 80 -------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 128
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+ADFG + TL+ TL Y PPE++ G +
Sbjct: 129 RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSG---TLDYLPPEMIEGRM-H 184
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
VD+WS+G + E L GKP E +I
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 219
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 128/283 (45%), Gaps = 51/283 (18%)
Query: 16 TGEIVALKKIRMDNEKEGFPITAI-REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPD 74
TG VA+K + + + I REI+ LK +H ++IKL +++++P
Sbjct: 35 TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT---------- 84
Query: 75 GNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDI 133
+MV EY+ +L + G R + + +Q+L+ + YCH + V+HRD+
Sbjct: 85 ------DFFMVMEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCHRHMVVHRDL 137
Query: 134 KGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMW 193
K N+L+D N K+ADFGL+ S L + + Y PE++ G GP VD+W
Sbjct: 138 KPENVLLDAHMNAKIADFGLSNMMS--DGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIW 195
Query: 194 SVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKR 253
S G I LL G LP + E + +F + I GV +P Y
Sbjct: 196 SCGVILYALLCGT--LPFDD--EHVPTLF-------KKIRGGVFYIPEY----------- 233
Query: 254 RVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD 296
+R LL ML +DP +R + KD + E+F D
Sbjct: 234 --------LNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQD 268
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE ++ I+ALK + + EK G RE++I L+H N+++L
Sbjct: 29 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH----- 83
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D + Y++ EY + +F + Y+ +L L YCH
Sbjct: 84 -------DATR----VYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+ADFG + TL TL Y PPE++ G +
Sbjct: 133 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCG---TLDYLPPEMIEGRM-H 188
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
VD+WS+G + E L GKP E +I
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE ++ I+ALK + + EK G RE++I L+H N+++L
Sbjct: 24 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH----- 78
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D + Y++ EY + +F + Y+ +L L YCH
Sbjct: 79 -------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+ADFG + TL TL Y PPE++ G +
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCG---TLDYLPPEMIEGRM-H 183
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
VD+WS+G + E L GKP E +I
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE ++ I+ALK + + EK G RE++I L+H N+++L
Sbjct: 41 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH----- 95
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D + Y++ EY + +F + Y+ +L L YCH
Sbjct: 96 -------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 144
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+ADFG + TL TL Y PPE++ G +
Sbjct: 145 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCG---TLDYLPPEMIEGRM-H 200
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
VD+WS+G + E L GKP E +I
Sbjct: 201 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 235
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE ++ I+ALK + + EK G RE++I L+H N+++L
Sbjct: 25 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH----- 79
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D + Y++ EY + +F + Y+ +L L YCH
Sbjct: 80 -------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 128
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+ADFG + +TL TL Y PPE++ G +
Sbjct: 129 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCG---TLDYLPPEMIEGRM-H 184
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
VD+WS+G + E L GKP E +I
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 219
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 142/295 (48%), Gaps = 58/295 (19%)
Query: 7 QVFMAREIKTGEIVALK----KIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTS 62
+V +A TG+ VALK K+ ++ +G REI L+ L+H ++IKL +++ S
Sbjct: 29 KVKLAYHTTTGQKVALKIINKKVLAKSDMQG---RIEREISYLRLLRHPHIIKLYDVIKS 85
Query: 63 PGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTG-LADRPGLRFTVPQIKCYMKQLLTGLH 121
+DE MV EY ++L + R + + + + + +Q+++ +
Sbjct: 86 ----KDE------------IIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQIISAVE 127
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLL 181
YCH ++++HRD+K NLL+D N+K+ADFGL+ + N L + Y PE++
Sbjct: 128 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSCGSPNYAAPEVIS 185
Query: 182 GATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPA 241
G GP VD+WS G I +L + LP +E+ + +F + I GV +P
Sbjct: 186 GKLYAGPEVDVWSCGVILYVMLCRR--LPFDDES--IPVLF-------KNISNGVYTLPK 234
Query: 242 YNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD 296
+ P A L+++ML+++P RIS + + ++F D
Sbjct: 235 F--LSPG-----------------AAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 270
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 142/295 (48%), Gaps = 58/295 (19%)
Query: 7 QVFMAREIKTGEIVALK----KIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTS 62
+V +A TG+ VALK K+ ++ +G REI L+ L+H ++IKL +++ S
Sbjct: 28 KVKLAYHTTTGQKVALKIINKKVLAKSDMQG---RIEREISYLRLLRHPHIIKLYDVIKS 84
Query: 63 PGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTG-LADRPGLRFTVPQIKCYMKQLLTGLH 121
+DE MV EY ++L + R + + + + + +Q+++ +
Sbjct: 85 ----KDE------------IIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQIISAVE 126
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLL 181
YCH ++++HRD+K NLL+D N+K+ADFGL+ + N L + Y PE++
Sbjct: 127 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSCGSPNYAAPEVIS 184
Query: 182 GATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPA 241
G GP VD+WS G I +L + LP +E+ + +F + I GV +P
Sbjct: 185 GKLYAGPEVDVWSCGVILYVMLCRR--LPFDDES--IPVLF-------KNISNGVYTLPK 233
Query: 242 YNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD 296
+ P A L+++ML+++P RIS + + ++F D
Sbjct: 234 F--LSPG-----------------AAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 269
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 127/283 (44%), Gaps = 51/283 (18%)
Query: 16 TGEIVALKKIRMDNEKEGFPITAI-REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPD 74
TG VA+K + + + I REI+ LK +H ++IKL +++++P
Sbjct: 35 TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT---------- 84
Query: 75 GNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDI 133
+MV EY+ +L + G R + + +Q+L+ + YCH + V+HRD+
Sbjct: 85 ------DFFMVMEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCHRHMVVHRDL 137
Query: 134 KGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMW 193
K N+L+D N K+ADFGL+ S L + Y PE++ G GP VD+W
Sbjct: 138 KPENVLLDAHMNAKIADFGLSNMMS--DGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIW 195
Query: 194 SVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKR 253
S G I LL G LP + E + +F + I GV +P Y
Sbjct: 196 SCGVILYALLCGT--LPFDD--EHVPTLF-------KKIRGGVFYIPEY----------- 233
Query: 254 RVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD 296
+R LL ML +DP +R + KD + E+F D
Sbjct: 234 --------LNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQD 268
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE ++ I+ALK + + EK G RE++I L+H N+++L
Sbjct: 27 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH----- 81
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D + Y++ EY + +F + Y+ +L L YCH
Sbjct: 82 -------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+ADFG + TL TL Y PPE++ G +
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCG---TLDYLPPEMIEGRM-H 186
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
VD+WS+G + E L GKP E +I
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 127/291 (43%), Gaps = 51/291 (17%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V +A T E VA+K + M + P +EI I L HENV+K
Sbjct: 22 EVQLAVNRVTEEAVAVKIVDMKRAVDC-PENIKKEICINAMLNHENVVKFY--------- 71
Query: 67 RDEQGRPDGNKYRGST-YMVFEYMDHDLTGLADR--PGLRFTVPQIKCYMKQLLTGLHYC 123
G++ G+ Y+ EY L DR P + P + + QL+ G+ Y
Sbjct: 72 --------GHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 124 HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPELLLG 182
H + HRDIK NLL+D NLK++DFGLA F Y++ L N++ TL Y PELL
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY 242
+ VD+WS G + +L G+ LP ++ + Y
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE---------------------Y 218
Query: 243 NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
+ +K +T ++ D L LL K+L+ +PS RI+ D ++
Sbjct: 219 SDWKEKKTYLNP----WKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 265
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE ++ I+ALK + + EK G RE++I L+H N+++L
Sbjct: 29 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH----- 83
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D + Y++ EY + +F + Y+ +L L YCH
Sbjct: 84 -------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+ADFG + TL TL Y PPE++ G +
Sbjct: 133 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCG---TLDYLPPEMIEGRM-H 188
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
VD+WS+G + E L GKP E +I
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 141/294 (47%), Gaps = 56/294 (19%)
Query: 7 QVFMAREIKTGEIVALK----KIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTS 62
+V +A TG+ VALK K+ ++ +G REI L+ L+H ++IKL +++ S
Sbjct: 19 KVKLAYHTTTGQKVALKIINKKVLAKSDMQG---RIEREISYLRLLRHPHIIKLYDVIKS 75
Query: 63 PGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHY 122
+DE MV EY ++L + + + + + + +Q+++ + Y
Sbjct: 76 ----KDE------------IIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEY 118
Query: 123 CHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLG 182
CH ++++HRD+K NLL+D N+K+ADFGL+ + N L + Y PE++ G
Sbjct: 119 CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSCGSPNYAAPEVISG 176
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY 242
GP VD+WS G I +L + LP +E+ + +F + I GV +P +
Sbjct: 177 KLYAGPEVDVWSCGVILYVMLCRR--LPFDDES--IPVLF-------KNISNGVYTLPKF 225
Query: 243 NHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD 296
P A L+++ML+++P RIS + + ++F D
Sbjct: 226 --LSPG-----------------AAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 260
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 142/295 (48%), Gaps = 58/295 (19%)
Query: 7 QVFMAREIKTGEIVALK----KIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTS 62
+V +A TG+ VALK K+ ++ +G REI L+ L+H ++IKL +++ S
Sbjct: 23 KVKLAYHTTTGQKVALKIINKKVLAKSDMQG---RIEREISYLRLLRHPHIIKLYDVIKS 79
Query: 63 PGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTG-LADRPGLRFTVPQIKCYMKQLLTGLH 121
+DE MV EY ++L + R + + + + + +Q+++ +
Sbjct: 80 ----KDE------------IIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQIISAVE 121
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLL 181
YCH ++++HRD+K NLL+D N+K+ADFGL+ + N L + Y PE++
Sbjct: 122 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSCGSPNYAAPEVIS 179
Query: 182 GATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPA 241
G GP VD+WS G I +L + LP +E+ + +F + I GV +P
Sbjct: 180 GKLYAGPEVDVWSCGVILYVMLCRR--LPFDDES--IPVLF-------KNISNGVYTLPK 228
Query: 242 YNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD 296
+ P A L+++ML+++P RIS + + ++F D
Sbjct: 229 F--LSPG-----------------AAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 264
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE ++ I+ALK + + EK G RE++I L+H N+++L
Sbjct: 28 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH----- 82
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D + Y++ EY + +F + Y+ +L L YCH
Sbjct: 83 -------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 131
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+ADFG + TL TL Y PPE++ G +
Sbjct: 132 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCG---TLDYLPPEMIEGRM-H 187
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
VD+WS+G + E L GKP E +I
Sbjct: 188 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 222
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE ++ I+ALK + + EK G RE++I L+H N+++L
Sbjct: 50 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH----- 104
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D + Y++ EY + +F + Y+ +L L YCH
Sbjct: 105 -------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 153
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+ADFG + + L TL Y PPE++ G +
Sbjct: 154 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCG---TLDYLPPEMIEGRM-H 209
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
VD+WS+G + E L GKP E +I
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 244
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE ++ I+ALK + + EK G RE++I L+H N+++L G
Sbjct: 23 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY------GYF 76
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D Y++ EY + +F + Y+ +L L YCH
Sbjct: 77 HDAT----------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 126
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+ADFG + TL TL Y PPE++ G +
Sbjct: 127 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCG---TLDYLPPEMIEGRM-H 182
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
VD+WS+G + E L GKP E +I
Sbjct: 183 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 217
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE ++ I+ALK + + EK G RE++I L+H N+++L G
Sbjct: 27 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY------GYF 80
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D Y++ EY + +F + Y+ +L L YCH
Sbjct: 81 HDAT----------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+ADFG + TL TL Y PPE++ G +
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCG---TLDYLPPEMIEGRM-H 186
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
VD+WS+G + E L GKP E +I
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE ++ I+ALK + + EK G RE++I L+H N+++L
Sbjct: 29 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH----- 83
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D + Y++ EY + +F + Y+ +L L YCH
Sbjct: 84 -------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+ADFG + TL TL Y PPE + G +
Sbjct: 133 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCG---TLDYLPPEXIEGRX-H 188
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
VD+WS+G + E L GKP E +I
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 94/176 (53%), Gaps = 21/176 (11%)
Query: 35 PITAI-REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDL 93
PI + +EI ILKKL H NV+KL E++ P + YMVFE ++
Sbjct: 79 PIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDH--------------LYMVFELVNQ-- 122
Query: 94 TGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFG 152
+ + P L+ + Q + Y + L+ G+ Y H +++HRDIK SNLL+ +G++K+ADFG
Sbjct: 123 GPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFG 182
Query: 153 LARSFSYDHNNTLTNRVITLWYRPPELLLGATKY--GPAVDMWSVGCIFAELLNGK 206
++ F + L+N V T + PE L K G A+D+W++G + G+
Sbjct: 183 VSNEFK-GSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE ++ I+ALK + + EK G RE++I L+H N+++L G
Sbjct: 28 VYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLY------GYF 81
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D Y++ EY + RF + Y+ +L L YCH
Sbjct: 82 HDAT----------RVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK 131
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+ADFG + +TL TL Y PPE++ G +
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCG---TLDYLPPEMIEGRM-H 187
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
VD+WS+G + E L G P E +I
Sbjct: 188 DEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRI 222
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE ++ I+ALK + + EK G RE++I L+H N+++L
Sbjct: 29 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH----- 83
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D + Y++ EY + +F + Y+ +L L YCH
Sbjct: 84 -------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+ADFG + + ++ T+ TL Y PPE++ G +
Sbjct: 133 RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRM-H 188
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
VD+WS+G + E L GKP E +I
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE ++ I+ALK + + EK G RE++I L+H N+++L
Sbjct: 24 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH----- 78
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D + Y++ EY + +F + Y+ +L L YCH
Sbjct: 79 -------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+ADFG + L TL Y PPE++ G +
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCG---TLDYLPPEMIEGRM-H 183
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
VD+WS+G + E L GKP E +I
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE ++ I+ALK + + EK G RE++I L+H N+++L G
Sbjct: 28 VYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLY------GYF 81
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D Y++ EY + RF + Y+ +L L YCH
Sbjct: 82 HDAT----------RVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK 131
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+ADFG + TL TL Y PPE++ G +
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCG---TLDYLPPEMIEGRM-H 187
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
VD+WS+G + E L G P E +I
Sbjct: 188 DEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRI 222
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE ++ I+ALK + + EK G RE++I L+H N+++L
Sbjct: 27 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH----- 81
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D + Y++ EY + +F + Y+ +L L YCH
Sbjct: 82 -------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+ADFG + + L TL Y PPE++ G +
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCG---TLDYLPPEMIEGRM-H 186
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
VD+WS+G + E L GKP E +I
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE ++ I+ALK + + EK G RE++I L+H N+++L
Sbjct: 26 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH----- 80
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D + Y++ EY + +F + Y+ +L L YCH
Sbjct: 81 -------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 129
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+A+FG + TL TL Y PPE++ G +
Sbjct: 130 RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCG---TLDYLPPEMIEGRM-H 185
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
VD+WS+G + E L GKP E +I
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 220
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE ++ I+ALK + + EK G RE++I L+H N+++L
Sbjct: 27 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH----- 81
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D + Y++ EY + +F + Y+ +L L YCH
Sbjct: 82 -------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+ADFG + L TL Y PPE++ G +
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCG---TLDYLPPEMIEGRM-H 186
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
VD+WS+G + E L GKP E +I
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE ++ I+ALK + + EK G RE++I L+H N+++L
Sbjct: 25 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH----- 79
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D + Y++ EY + +F + Y+ +L L YCH
Sbjct: 80 -------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 128
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+ADFG + + ++ T+ TL Y PPE++ G +
Sbjct: 129 RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRM-H 184
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
VD+WS+G + E L GKP E +I
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 219
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE + I+ALK + + EK G RE++I L+H N+++L G
Sbjct: 21 VYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY------GYF 74
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D Y++ EY + +F + Y+ +L L YCH
Sbjct: 75 HDAT----------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 124
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+ADFG + TL TL Y PPE++ G +
Sbjct: 125 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCG---TLDYLPPEMIEGRM-H 180
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
VD+WS+G + E L GKP E +I
Sbjct: 181 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 215
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE ++ I+ALK + + EK G RE++I L+H N+++L
Sbjct: 24 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH----- 78
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D + Y++ EY + +F + Y+ +L L YCH
Sbjct: 79 -------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+ADFG + + ++ T+ TL Y PPE++ G +
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRM-H 183
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
VD+WS+G + E L GKP E +I
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE ++ I+ALK + + EK G RE++I L+H N+++L
Sbjct: 29 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH----- 83
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D + Y++ EY + +F + Y+ +L L YCH
Sbjct: 84 -------DATR----VYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+ADFG + L TL Y PPE++ G +
Sbjct: 133 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXG---TLDYLPPEMIEGRM-H 188
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
VD+WS+G + E L GKP E +I
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE ++ I+ALK + + EK G RE++I L+H N+++L
Sbjct: 26 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH----- 80
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D + Y++ EY + +F + Y+ +L L YCH
Sbjct: 81 -------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 129
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+ADFG + L TL Y PPE++ G +
Sbjct: 130 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCG---TLDYLPPEMIEGRM-H 185
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
VD+WS+G + E L GKP E +I
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 220
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE ++ I+ALK + + EK G RE++I L+H N+++L G
Sbjct: 27 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY------GYF 80
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D Y++ EY + +F + Y+ +L L YCH
Sbjct: 81 HDAT----------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+A+FG + TL TL Y PPE++ G +
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCG---TLDYLPPEMIEGRM-H 186
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
VD+WS+G + E L GKP E +I
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE ++ I+ALK + + EK G RE++I L+H N+++L
Sbjct: 24 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH----- 78
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D + Y++ EY + +F + Y+ +L L YCH
Sbjct: 79 -------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+ADFG + L TL Y PPE++ G +
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCG---TLDYLPPEMIEGRM-H 183
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
VD+WS+G + E L GKP E +I
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE ++ I+ALK + + EK G RE++I L+H N+++L
Sbjct: 24 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH----- 78
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D + Y++ EY + +F + Y+ +L L YCH
Sbjct: 79 -------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+ADFG + + ++ T+ TL Y PPE++ G +
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRM-H 183
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
VD+WS+G + E L GKP E +I
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE ++ I+ALK + + EK G RE++I L+H N+++L
Sbjct: 24 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH----- 78
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D + Y++ EY + +F + Y+ +L L YCH
Sbjct: 79 -------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+ADFG + L TL Y PPE++ G +
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCG---TLDYLPPEMIEGRM-H 183
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
VD+WS+G + E L GKP E +I
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE ++ I+ALK + + EK G RE++I L+H N+++L
Sbjct: 24 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH----- 78
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D + Y++ EY + +F + Y+ +L L YCH
Sbjct: 79 -------DATR----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+ADFG + L TL Y PPE++ G +
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCG---TLDYLPPEMIEGRM-H 183
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
VD+WS+G + E L GKP E +I
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE ++ I+ALK + + EK G RE++I L+H N+++L G
Sbjct: 27 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY------GYF 80
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D Y++ EY + +F + Y+ +L L YCH
Sbjct: 81 HDAT----------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+ADFG + L TL Y PPE++ G +
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCG---TLDYLPPEMIEGRM-H 186
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
VD+WS+G + E L GKP E +I
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 95/201 (47%), Gaps = 21/201 (10%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE + I+ALK + + EK G RE++I L+H N+++L G
Sbjct: 24 VYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY------GYF 77
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D Y++ EY + +F + Y+ +L L YCH
Sbjct: 78 HDST----------RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+V+HRDIK NLL+ + G LK+ADFG + L TL Y PPE++ G +
Sbjct: 128 KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCG---TLDYLPPEMIEGRM-H 183
Query: 187 GPAVDMWSVGCIFAELLNGKP 207
VD+WS+G + E L GKP
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKP 204
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 115/258 (44%), Gaps = 54/258 (20%)
Query: 40 REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMD-----HDLT 94
RE I L+H ++++L E +S G YMVFE+MD ++
Sbjct: 77 REASICHMLKHPHIVELLETYSSDG----------------MLYMVFEFMDGADLCFEIV 120
Query: 95 GLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLI---DNEGNLKLADF 151
AD G ++ YM+Q+L L YCH N ++HRD+K +L+ +N +KL F
Sbjct: 121 KRAD-AGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGF 179
Query: 152 GLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPG 211
G+A + RV T + PE ++ YG VD+W G I LL+G LP
Sbjct: 180 GVAIQLG-ESGLVAGGRVGTPHFMAPE-VVKREPYGKPVDVWGCGVILFILLSG--CLPF 235
Query: 212 KNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLE 271
E+L E I G KM P + + H A +L+
Sbjct: 236 YGTKERLF----------EGIIKGKYKM------NPRQ---------WSHISESAKDLVR 270
Query: 272 KMLMLDPSQRISAKDALD 289
+MLMLDP++RI+ +AL+
Sbjct: 271 RMLMLDPAERITVYEALN 288
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 132/293 (45%), Gaps = 62/293 (21%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITA-----IREIKILKKLQHENVIKLKEIVT 61
+V + ++ TG A+K I+ K T+ + E+ +LK+L H N++KL E
Sbjct: 36 EVLLCKDKLTGAERAIKIIK----KSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFF- 90
Query: 62 SPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR--FTVPQIKCYMKQLLTG 119
D Y Y+V E + L D LR F+ MKQ+L+G
Sbjct: 91 -----------EDKRNY----YLVMEV--YRGGELFDEIILRQKFSEVDAAVIMKQVLSG 133
Query: 120 LHYCHVNQVLHRDIKGSNLLIDNEGN---LKLADFGLARSFSYDHNNTLTNRVITLWYRP 176
Y H + ++HRD+K NLL++++ +K+ DFGL+ F + + R+ T +Y
Sbjct: 134 TTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKMKERLGTAYYIA 191
Query: 177 PELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGV 236
PE+L KY D+WS G I LL G P G+ + E L ++ + S D W V
Sbjct: 192 PEVL--RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQV 249
Query: 237 SKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD 289
S A +L++ ML +PS+RISA++AL+
Sbjct: 250 SD--------------------------EAKQLVKLMLTYEPSKRISAEEALN 276
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 106/230 (46%), Gaps = 22/230 (9%)
Query: 40 REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADR 99
+EI++L++L+H+NVI+L +++ N+ + YMV EY + + D
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLY--------------NEEKQKMYMVMEYCVCGMQEMLDS 100
Query: 100 -PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFS 158
P RF V Q Y QL+ GL Y H ++H+DIK NLL+ G LK++ G+A +
Sbjct: 101 VPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALH 160
Query: 159 -YDHNNTLTNRVITLWYRPPELLLGATKY-GPAVDMWSVGCIFAELLNGKPILPGKNEAE 216
+ ++T + ++PPE+ G + G VD+WS G + G G N
Sbjct: 161 PFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN--- 217
Query: 217 QLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHA 266
+ K+FE G I PG P + K + R R +H+
Sbjct: 218 -IYKLFENIGKGSYAI-PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHS 265
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 131/288 (45%), Gaps = 53/288 (18%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V + R+ T A+K IR + + E+ +LK L H N++KL +
Sbjct: 52 EVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFF------ 105
Query: 67 RDEQGRPDGNKYRGSTYMVFE-YMDHDLTG-LADRPGLRFTVPQIKCYMKQLLTGLHYCH 124
D Y Y+V E Y +L + R ++F +KQ+L+G+ Y H
Sbjct: 106 ------EDKRNY----YLVMECYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLH 153
Query: 125 VNQVLHRDIKGSNLLIDN---EGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLL 181
+ ++HRD+K NLL+++ + +K+ DFGL+ F ++ + R+ T +Y PE+L
Sbjct: 154 KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF--ENQKKMKERLGTAYYIAPEVL- 210
Query: 182 GATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPA 241
KY D+WS+G I LL G P G+ + E L K+ + + D W VS+
Sbjct: 211 -RKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSE--- 266
Query: 242 YNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD 289
A +L+++ML D +RISA+ AL+
Sbjct: 267 -----------------------GAKDLIKQMLQFDSQRRISAQQALE 291
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 115/258 (44%), Gaps = 54/258 (20%)
Query: 40 REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMD-----HDLT 94
RE I L+H ++++L E +S G YMVFE+MD ++
Sbjct: 75 REASICHMLKHPHIVELLETYSSDG----------------MLYMVFEFMDGADLCFEIV 118
Query: 95 GLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLI---DNEGNLKLADF 151
AD G ++ YM+Q+L L YCH N ++HRD+K +L+ +N +KL F
Sbjct: 119 KRAD-AGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGF 177
Query: 152 GLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPG 211
G+A + RV T + PE ++ YG VD+W G I LL+G LP
Sbjct: 178 GVAIQLG-ESGLVAGGRVGTPHFMAPE-VVKREPYGKPVDVWGCGVILFILLSG--CLPF 233
Query: 212 KNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLE 271
E+L E I G KM P + + H A +L+
Sbjct: 234 YGTKERLF----------EGIIKGKYKM------NPRQ---------WSHISESAKDLVR 268
Query: 272 KMLMLDPSQRISAKDALD 289
+MLMLDP++RI+ +AL+
Sbjct: 269 RMLMLDPAERITVYEALN 286
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 131/293 (44%), Gaps = 62/293 (21%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITA-----IREIKILKKLQHENVIKLKEIVT 61
+V + ++ TG A+K I+ K T+ + E+ +LK+L H N++KL E
Sbjct: 19 EVLLCKDKLTGAERAIKIIK----KSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFF- 73
Query: 62 SPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR--FTVPQIKCYMKQLLTG 119
D Y Y+V E + L D LR F+ MKQ+L+G
Sbjct: 74 -----------EDKRNY----YLVMEV--YRGGELFDEIILRQKFSEVDAAVIMKQVLSG 116
Query: 120 LHYCHVNQVLHRDIKGSNLLIDNEGN---LKLADFGLARSFSYDHNNTLTNRVITLWYRP 176
Y H + ++HRD+K NLL++++ +K+ DFGL+ F + R+ T +Y
Sbjct: 117 TTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV--GGKMKERLGTAYYIA 174
Query: 177 PELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGV 236
PE+L KY D+WS G I LL G P G+ + E L ++ + S D W V
Sbjct: 175 PEVL--RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQV 232
Query: 237 SKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALD 289
S A +L++ ML +PS+RISA++AL+
Sbjct: 233 SD--------------------------EAKQLVKLMLTYEPSKRISAEEALN 259
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 22/193 (11%)
Query: 16 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDG 75
TGE+VA+KK++ E+ REI+ILK LQH+N++K K + S G
Sbjct: 45 TGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDNIVKYKGVCYSAG----------- 91
Query: 76 NKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIK 134
R + ++ EY+ + L + R ++ Y Q+ G+ Y + +HRD+
Sbjct: 92 ---RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLA 148
Query: 135 GSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN---RVITLWYRPPELLLGATKYGPAVD 191
N+L++NE +K+ DFGL + D WY P L +K+ A D
Sbjct: 149 TRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES--LTESKFSVASD 206
Query: 192 MWSVGCIFAELLN 204
+WS G + EL
Sbjct: 207 VWSFGVVLYELFT 219
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 22/193 (11%)
Query: 16 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDG 75
TGE+VA+KK++ E+ REI+ILK LQH+N++K K + S G
Sbjct: 69 TGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDNIVKYKGVCYSAG----------- 115
Query: 76 NKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIK 134
R + ++ EY+ + L + R ++ Y Q+ G+ Y + +HRD+
Sbjct: 116 ---RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLA 172
Query: 135 GSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN---RVITLWYRPPELLLGATKYGPAVD 191
N+L++NE +K+ DFGL + D WY P L +K+ A D
Sbjct: 173 TRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES--LTESKFSVASD 230
Query: 192 MWSVGCIFAELLN 204
+WS G + EL
Sbjct: 231 VWSFGVVLYELFT 243
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 22/193 (11%)
Query: 16 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDG 75
TGE+VA+KK++ E+ REI+ILK LQH+N++K K + S G
Sbjct: 41 TGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDNIVKYKGVCYSAG----------- 87
Query: 76 NKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIK 134
R + ++ EY+ + L + R ++ Y Q+ G+ Y + +HRD+
Sbjct: 88 ---RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLA 144
Query: 135 GSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN---RVITLWYRPPELLLGATKYGPAVD 191
N+L++NE +K+ DFGL + D WY P L +K+ A D
Sbjct: 145 TRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES--LTESKFSVASD 202
Query: 192 MWSVGCIFAELLN 204
+WS G + EL
Sbjct: 203 VWSFGVVLYELFT 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 22/193 (11%)
Query: 16 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDG 75
TGE+VA+KK++ E+ REI+ILK LQH+N++K K + S G
Sbjct: 38 TGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDNIVKYKGVCYSAG----------- 84
Query: 76 NKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIK 134
R + ++ EY+ + L + R ++ Y Q+ G+ Y + +HRD+
Sbjct: 85 ---RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLA 141
Query: 135 GSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN---RVITLWYRPPELLLGATKYGPAVD 191
N+L++NE +K+ DFGL + D WY P L +K+ A D
Sbjct: 142 TRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES--LTESKFSVASD 199
Query: 192 MWSVGCIFAELLN 204
+WS G + EL
Sbjct: 200 VWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 22/193 (11%)
Query: 16 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDG 75
TGE+VA+KK++ E+ REI+ILK LQH+N++K K + S G
Sbjct: 36 TGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDNIVKYKGVCYSAG----------- 82
Query: 76 NKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIK 134
R + ++ EY+ + L + R ++ Y Q+ G+ Y + +HRD+
Sbjct: 83 ---RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLA 139
Query: 135 GSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN---RVITLWYRPPELLLGATKYGPAVD 191
N+L++NE +K+ DFGL + D WY P L +K+ A D
Sbjct: 140 TRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES--LTESKFSVASD 197
Query: 192 MWSVGCIFAELLN 204
+WS G + EL
Sbjct: 198 VWSFGVVLYELFT 210
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 22/193 (11%)
Query: 16 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDG 75
TGE+VA+KK++ E+ REI+ILK LQH+N++K K + S G
Sbjct: 43 TGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDNIVKYKGVCYSAG----------- 89
Query: 76 NKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIK 134
R + ++ EY+ + L + R ++ Y Q+ G+ Y + +HRD+
Sbjct: 90 ---RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLA 146
Query: 135 GSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN---RVITLWYRPPELLLGATKYGPAVD 191
N+L++NE +K+ DFGL + D WY P L +K+ A D
Sbjct: 147 TRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES--LTESKFSVASD 204
Query: 192 MWSVGCIFAELLN 204
+WS G + EL
Sbjct: 205 VWSFGVVLYELFT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 22/193 (11%)
Query: 16 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDG 75
TGE+VA+KK++ E+ REI+ILK LQH+N++K K + S G
Sbjct: 44 TGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDNIVKYKGVCYSAG----------- 90
Query: 76 NKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIK 134
R + ++ EY+ + L + R ++ Y Q+ G+ Y + +HRD+
Sbjct: 91 ---RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLA 147
Query: 135 GSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN---RVITLWYRPPELLLGATKYGPAVD 191
N+L++NE +K+ DFGL + D WY P L +K+ A D
Sbjct: 148 TRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES--LTESKFSVASD 205
Query: 192 MWSVGCIFAELLN 204
+WS G + EL
Sbjct: 206 VWSFGVVLYELFT 218
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 22/193 (11%)
Query: 16 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDG 75
TGE+VA+KK++ E+ REI+ILK LQH+N++K K + S G
Sbjct: 42 TGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDNIVKYKGVCYSAG----------- 88
Query: 76 NKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIK 134
R + ++ EY+ + L + R ++ Y Q+ G+ Y + +HRD+
Sbjct: 89 ---RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLA 145
Query: 135 GSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN---RVITLWYRPPELLLGATKYGPAVD 191
N+L++NE +K+ DFGL + D WY P L +K+ A D
Sbjct: 146 TRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES--LTESKFSVASD 203
Query: 192 MWSVGCIFAELLN 204
+WS G + EL
Sbjct: 204 VWSFGVVLYELFT 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 22/193 (11%)
Query: 16 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDG 75
TGE+VA+KK++ E+ REI+ILK LQH+N++K K + S G
Sbjct: 38 TGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDNIVKYKGVCYSAG----------- 84
Query: 76 NKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIK 134
R + ++ EY+ + L + R ++ Y Q+ G+ Y + +HRD+
Sbjct: 85 ---RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLA 141
Query: 135 GSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN---RVITLWYRPPELLLGATKYGPAVD 191
N+L++NE +K+ DFGL + D WY P L +K+ A D
Sbjct: 142 TRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES--LTESKFSVASD 199
Query: 192 MWSVGCIFAELLN 204
+WS G + EL
Sbjct: 200 VWSFGVVLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 22/193 (11%)
Query: 16 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDG 75
TGE+VA+KK++ E+ REI+ILK LQH+N++K K + S G
Sbjct: 37 TGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDNIVKYKGVCYSAG----------- 83
Query: 76 NKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIK 134
R + ++ EY+ + L + R ++ Y Q+ G+ Y + +HRD+
Sbjct: 84 ---RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLA 140
Query: 135 GSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN---RVITLWYRPPELLLGATKYGPAVD 191
N+L++NE +K+ DFGL + D WY P L +K+ A D
Sbjct: 141 TRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES--LTESKFSVASD 198
Query: 192 MWSVGCIFAELLN 204
+WS G + EL
Sbjct: 199 VWSFGVVLYELFT 211
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 22/193 (11%)
Query: 16 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDG 75
TGE+VA+KK++ E+ REI+ILK LQH+N++K K + S G
Sbjct: 56 TGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDNIVKYKGVCYSAG----------- 102
Query: 76 NKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIK 134
R + ++ EY+ + L + R ++ Y Q+ G+ Y + +HRD+
Sbjct: 103 ---RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLA 159
Query: 135 GSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN---RVITLWYRPPELLLGATKYGPAVD 191
N+L++NE +K+ DFGL + D WY P L +K+ A D
Sbjct: 160 TRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES--LTESKFSVASD 217
Query: 192 MWSVGCIFAELLN 204
+WS G + EL
Sbjct: 218 VWSFGVVLYELFT 230
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 22/193 (11%)
Query: 16 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDG 75
TGE+VA+KK++ E+ REI+ILK LQH+N++K K + S G
Sbjct: 56 TGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDNIVKYKGVCYSAG----------- 102
Query: 76 NKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIK 134
R + ++ EY+ + L + R ++ Y Q+ G+ Y + +HRD+
Sbjct: 103 ---RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLA 159
Query: 135 GSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN---RVITLWYRPPELLLGATKYGPAVD 191
N+L++NE +K+ DFGL + D WY P L +K+ A D
Sbjct: 160 TRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES--LTESKFSVASD 217
Query: 192 MWSVGCIFAELLN 204
+WS G + EL
Sbjct: 218 VWSFGVVLYELFT 230
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 90/198 (45%), Gaps = 36/198 (18%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYD--H 161
T P+ + Y++Q++ G Y H N+V+HRD+K NL ++ + +K+ DFGLA YD
Sbjct: 118 LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER 177
Query: 162 NNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
TL T Y PE +L + VD+WS+GCI LL GKP E +I
Sbjct: 178 KKTLCG---TPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 233
Query: 222 FELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQR 281
K+ + +H + A L++KML DP+ R
Sbjct: 234 ------------------------------KKNEYSIPKHINPVAASLIQKMLQTDPTAR 263
Query: 282 ISAKDALDSEYFWTDPLP 299
+ + L+ E+F + +P
Sbjct: 264 PTINELLNDEFFTSGYIP 281
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 88/193 (45%), Gaps = 22/193 (11%)
Query: 16 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDG 75
TGE+VA+KK++ E+ REI+ILK LQH+N++K K + S G
Sbjct: 41 TGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDNIVKYKGVCYSAG----------- 87
Query: 76 NKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIK 134
R + ++ EY+ + L R ++ Y Q+ G+ Y + +HRD+
Sbjct: 88 ---RRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLA 144
Query: 135 GSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN---RVITLWYRPPELLLGATKYGPAVD 191
N+L++NE +K+ DFGL + D WY P L +K+ A D
Sbjct: 145 TRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES--LTESKFSVASD 202
Query: 192 MWSVGCIFAELLN 204
+WS G + EL
Sbjct: 203 VWSFGVVLYELFT 215
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 90/198 (45%), Gaps = 36/198 (18%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYD--H 161
T P+ + Y++Q++ G Y H N+V+HRD+K NL ++ + +K+ DFGLA YD
Sbjct: 114 LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER 173
Query: 162 NNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
TL T Y PE +L + VD+WS+GCI LL GKP E +I
Sbjct: 174 KKTLCG---TPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 229
Query: 222 FELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQR 281
K+ + +H + A L++KML DP+ R
Sbjct: 230 ------------------------------KKNEYSIPKHINPVAASLIQKMLQTDPTAR 259
Query: 282 ISAKDALDSEYFWTDPLP 299
+ + L+ E+F + +P
Sbjct: 260 PTINELLNDEFFTSGYIP 277
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 90/198 (45%), Gaps = 36/198 (18%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYD--H 161
T P+ + Y++Q++ G Y H N+V+HRD+K NL ++ + +K+ DFGLA YD
Sbjct: 114 LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER 173
Query: 162 NNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
TL T Y PE +L + VD+WS+GCI LL GKP E +I
Sbjct: 174 KKTLCG---TPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 229
Query: 222 FELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQR 281
K+ + +H + A L++KML DP+ R
Sbjct: 230 ------------------------------KKNEYSIPKHINPVAASLIQKMLQTDPTAR 259
Query: 282 ISAKDALDSEYFWTDPLP 299
+ + L+ E+F + +P
Sbjct: 260 PTINELLNDEFFTSGYIP 277
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 22/193 (11%)
Query: 16 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDG 75
TGE+VA+KK++ E+ REI+ILK LQH+N++K K + S G
Sbjct: 38 TGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDNIVKYKGVCYSAG----------- 84
Query: 76 NKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIK 134
R + ++ EY+ + L + R ++ Y Q+ G+ Y + +HRD+
Sbjct: 85 ---RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLA 141
Query: 135 GSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN---RVITLWYRPPELLLGATKYGPAVD 191
N+L++NE +K+ DFGL + D WY P L +K+ A D
Sbjct: 142 TRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPES--LTESKFSVASD 199
Query: 192 MWSVGCIFAELLN 204
+WS G + EL
Sbjct: 200 VWSFGVVLYELFT 212
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 83/156 (53%), Gaps = 10/156 (6%)
Query: 78 YRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVNQ--VLHRDIK 134
+R +VFE + ++L L R ++ + + +Q+ T L + + ++H D+K
Sbjct: 108 FRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLK 167
Query: 135 GSNLLIDN--EGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDM 192
N+L+ N +K+ DFG + + +R +YR PE+LLG Y A+DM
Sbjct: 168 PENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSR----FYRSPEVLLGMP-YDLAIDM 222
Query: 193 WSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSP 228
WS+GCI E+ G+P+ G NE +Q++KI E+ G P
Sbjct: 223 WSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 258
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 83/156 (53%), Gaps = 10/156 (6%)
Query: 78 YRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVNQ--VLHRDIK 134
+R +VFE + ++L L R ++ + + +Q+ T L + + ++H D+K
Sbjct: 127 FRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLK 186
Query: 135 GSNLLIDN--EGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDM 192
N+L+ N +K+ DFG + + +R +YR PE+LLG Y A+DM
Sbjct: 187 PENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSR----FYRSPEVLLGMP-YDLAIDM 241
Query: 193 WSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSP 228
WS+GCI E+ G+P+ G NE +Q++KI E+ G P
Sbjct: 242 WSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 277
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 22/193 (11%)
Query: 16 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDG 75
TGE+VA+KK++ E+ REI+ILK LQH+N++K K + S G
Sbjct: 41 TGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDNIVKYKGVCYSAG----------- 87
Query: 76 NKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIK 134
R + ++ E++ + L + R ++ Y Q+ G+ Y + +HRD+
Sbjct: 88 ---RRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLA 144
Query: 135 GSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN---RVITLWYRPPELLLGATKYGPAVD 191
N+L++NE +K+ DFGL + D WY P L +K+ A D
Sbjct: 145 TRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES--LTESKFSVASD 202
Query: 192 MWSVGCIFAELLN 204
+WS G + EL
Sbjct: 203 VWSFGVVLYELFT 215
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 36/198 (18%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN 163
T P+ + Y++Q++ G Y H N+V+HRD+K NL ++ + +K+ DFGLA YD
Sbjct: 138 LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER 197
Query: 164 TLTNRVI--TLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
+V+ T Y PE +L + VD+WS+GCI LL GKP E +I
Sbjct: 198 ---KKVLCGTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 253
Query: 222 FELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQR 281
K+ + +H + A L++KML DP+ R
Sbjct: 254 ------------------------------KKNEYSIPKHINPVAASLIQKMLQTDPTAR 283
Query: 282 ISAKDALDSEYFWTDPLP 299
+ + L+ E+F + +P
Sbjct: 284 PTINELLNDEFFTSGYIP 301
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 83/156 (53%), Gaps = 10/156 (6%)
Query: 78 YRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVNQ--VLHRDIK 134
+R +VFE + ++L L R ++ + + +Q+ T L + + ++H D+K
Sbjct: 127 FRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLK 186
Query: 135 GSNLLIDN--EGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDM 192
N+L+ N +K+ DFG + + +R +YR PE+LLG Y A+DM
Sbjct: 187 PENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSR----FYRSPEVLLGMP-YDLAIDM 241
Query: 193 WSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSP 228
WS+GCI E+ G+P+ G NE +Q++KI E+ G P
Sbjct: 242 WSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 277
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 36/198 (18%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN 163
T P+ + Y++Q++ G Y H N+V+HRD+K NL ++ + +K+ DFGLA YD
Sbjct: 136 LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER 195
Query: 164 TLTNRVI--TLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
+V+ T Y PE +L + VD+WS+GCI LL GKP E +I
Sbjct: 196 ---KKVLCGTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 251
Query: 222 FELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQR 281
K+ + +H + A L++KML DP+ R
Sbjct: 252 ------------------------------KKNEYSIPKHINPVAASLIQKMLQTDPTAR 281
Query: 282 ISAKDALDSEYFWTDPLP 299
+ + L+ E+F + +P
Sbjct: 282 PTINELLNDEFFTSGYIP 299
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 124/297 (41%), Gaps = 57/297 (19%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIR-EIKILKKLQHENVIKLKEIVTSP 63
++V +A I TGE+VA+K MD G + I+ EI+ LK L+H+++ +L ++ +
Sbjct: 23 FAKVKLACHILTGEMVAIKI--MDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLET- 79
Query: 64 GPERDEQGRPDGNKYRGSTYMVFEYMD----HDLTGLADRPGLRFTVPQIKCYMKQLLTG 119
NK +MV EY D DR + + + +Q+++
Sbjct: 80 -----------ANK----IFMVLEYCPGGELFDYIISQDR----LSEEETRVVFRQIVSA 120
Query: 120 LHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPEL 179
+ Y H HRD+K NLL D LKL DFGL + + L +L Y PEL
Sbjct: 121 VAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPEL 180
Query: 180 LLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM 239
+ G + G D+WS+G + L+ G N KI G D W
Sbjct: 181 IQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMR--GKYDVPKW------ 232
Query: 240 PAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTD 296
PS + LL++ML +DP +RIS K+ L+ + D
Sbjct: 233 -----LSPSSIL-----------------LLQQMLQVDPKKRISMKNLLNHPWIMQD 267
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 126/295 (42%), Gaps = 50/295 (16%)
Query: 10 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDE 69
+ R+ ++ E+VA+K I E REI + L+H N+++ KE++ +P
Sbjct: 37 LMRDKQSNELVAVKYIE---RGEKIAANVKREIINHRSLRHPNIVRFKEVILTPT----- 88
Query: 70 QGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQV 128
+V EY +L G RF+ + + + +QL++G+ YCH QV
Sbjct: 89 -----------HLAIVMEYASGGELFERICNAG-RFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 129 LHRDIKGSNLLIDNE--GNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
HRD+K N L+D LK+ DFG ++S S H+ + V T Y PE+LL
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICDFGYSKS-SVLHSQP-KSTVGTPAYIAPEVLLKKEYD 194
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
G D+WS G +L G E + K I +P Y H
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI-------HRILNVQYAIPDYVHIS 247
Query: 247 PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCD 301
P RH L+ ++ + DP++RIS + + E+F + LP D
Sbjct: 248 PE----------CRH-------LISRIFVADPAKRISIPEIRNHEWFLKN-LPAD 284
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 109 IKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDN-EGNLKLADFGLARSFSYDHNNTLTN 167
I Y KQ+L GL Y H NQ++HRDIKG N+LI+ G LK++DFG ++ + N
Sbjct: 124 IGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTET 182
Query: 168 RVITLWYRPPELL-LGATKYGPAVDMWSVGCIFAELLNGKP 207
TL Y PE++ G YG A D+WS+GC E+ GKP
Sbjct: 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKP 223
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 36/198 (18%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN 163
T P+ + Y++Q++ G Y H N+V+HRD+K NL ++ + +K+ DFGLA YD
Sbjct: 112 LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER 171
Query: 164 TLTNRVI--TLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
+V+ T Y PE +L + VD+WS+GCI LL GKP E +I
Sbjct: 172 ---KKVLCGTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 227
Query: 222 FELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQR 281
K+ + +H + A L++KML DP+ R
Sbjct: 228 ------------------------------KKNEYSIPKHINPVAASLIQKMLQTDPTAR 257
Query: 282 ISAKDALDSEYFWTDPLP 299
+ + L+ E+F + +P
Sbjct: 258 PTINELLNDEFFTSGYIP 275
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 22/193 (11%)
Query: 16 TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDG 75
TGE+VA+KK++ E+ REI+ILK LQH+N++K K + S G
Sbjct: 39 TGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDNIVKYKGVCYSAG----------- 85
Query: 76 NKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIK 134
R + ++ EY+ + L + R ++ Y Q+ G+ Y + +HR++
Sbjct: 86 ---RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLA 142
Query: 135 GSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN---RVITLWYRPPELLLGATKYGPAVD 191
N+L++NE +K+ DFGL + D WY P L +K+ A D
Sbjct: 143 TRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES--LTESKFSVASD 200
Query: 192 MWSVGCIFAELLN 204
+WS G + EL
Sbjct: 201 VWSFGVVLYELFT 213
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 105 TVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYD--HN 162
T P+ + +M+Q + G+ Y H N+V+HRD+K NL ++++ ++K+ DFGLA +D
Sbjct: 140 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK 199
Query: 163 NTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIF 222
TL T Y PE+L + VD+WS+GCI LL GKP E +I
Sbjct: 200 KTLCG---TPNYIAPEVLC-KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI- 254
Query: 223 ELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRI 282
K+ V RH + A L+ +ML DP+ R
Sbjct: 255 -----------------------------KKNEYSVPRHINPVASALIRRMLHADPTLRP 285
Query: 283 SAKDALDSEYFWT 295
S + L E+F +
Sbjct: 286 SVAELLTDEFFTS 298
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 131/295 (44%), Gaps = 59/295 (20%)
Query: 7 QVFMAREIKTGEIVALK-----KIRMDNEKEGFPITAIR-EIKILKKLQHENVIKLKEIV 60
+V +A E KT + VA+K K + + +E P + EI+ILKKL H +IK+K
Sbjct: 31 EVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF 90
Query: 61 TSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRP--GLRFTVPQIKCYMKQLLT 118
D Y Y+V E M+ L D+ R K Y Q+L
Sbjct: 91 -------------DAEDY----YIVLELMEGG--ELFDKVVGNKRLKEATCKLYFYQMLL 131
Query: 119 GLHYCHVNQVLHRDIKGSNLLIDNEGN---LKLADFGLARSFSYDHNNTLTNRVITLWYR 175
+ Y H N ++HRD+K N+L+ ++ +K+ DFG ++ + + T Y
Sbjct: 132 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTPTYL 189
Query: 176 PPELL--LGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIW 233
PE+L +G Y AVD WS+G I L+G P P Q+ S + I
Sbjct: 190 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQV--------SLKDQIT 239
Query: 234 PGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDAL 288
G YN F P EV+ AL+L++K+L++DP R + ++AL
Sbjct: 240 SG-----KYN-FIP---------EVWAEVSEKALDLVKKLLVVDPKARFTTEEAL 279
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 131/295 (44%), Gaps = 59/295 (20%)
Query: 7 QVFMAREIKTGEIVALK-----KIRMDNEKEGFPITAIR-EIKILKKLQHENVIKLKEIV 60
+V +A E KT + VA+K K + + +E P + EI+ILKKL H +IK+K
Sbjct: 25 EVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF 84
Query: 61 TSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRP--GLRFTVPQIKCYMKQLLT 118
D Y Y+V E M+ L D+ R K Y Q+L
Sbjct: 85 -------------DAEDY----YIVLELMEGG--ELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 119 GLHYCHVNQVLHRDIKGSNLLIDNEGN---LKLADFGLARSFSYDHNNTLTNRVITLWYR 175
+ Y H N ++HRD+K N+L+ ++ +K+ DFG ++ + + T Y
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTPTYL 183
Query: 176 PPELL--LGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIW 233
PE+L +G Y AVD WS+G I L+G P P Q+ S + I
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQV--------SLKDQIT 233
Query: 234 PGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDAL 288
G YN F P EV+ AL+L++K+L++DP R + ++AL
Sbjct: 234 SG-----KYN-FIP---------EVWAEVSEKALDLVKKLLVVDPKARFTTEEAL 273
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 109 IKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDN-EGNLKLADFGLARSFSYDHNNTLTN 167
I Y KQ+L GL Y H NQ++HRDIKG N+LI+ G LK++DFG ++ + N
Sbjct: 110 IGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTET 168
Query: 168 RVITLWYRPPELL-LGATKYGPAVDMWSVGCIFAELLNGKP 207
TL Y PE++ G YG A D+WS+GC E+ GKP
Sbjct: 169 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKP 209
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 131/295 (44%), Gaps = 59/295 (20%)
Query: 7 QVFMAREIKTGEIVALK-----KIRMDNEKEGFPITAIR-EIKILKKLQHENVIKLKEIV 60
+V +A E KT + VA+K K + + +E P + EI+ILKKL H +IK+K
Sbjct: 25 EVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF 84
Query: 61 TSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRP--GLRFTVPQIKCYMKQLLT 118
D Y Y+V E M+ L D+ R K Y Q+L
Sbjct: 85 -------------DAEDY----YIVLELMEGG--ELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 119 GLHYCHVNQVLHRDIKGSNLLIDNEGN---LKLADFGLARSFSYDHNNTLTNRVITLWYR 175
+ Y H N ++HRD+K N+L+ ++ +K+ DFG ++ + + T Y
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTPTYL 183
Query: 176 PPELL--LGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIW 233
PE+L +G Y AVD WS+G I L+G P P Q+ S + I
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQV--------SLKDQIT 233
Query: 234 PGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDAL 288
G YN F P EV+ AL+L++K+L++DP R + ++AL
Sbjct: 234 SG-----KYN-FIP---------EVWAEVSEKALDLVKKLLVVDPKARFTTEEAL 273
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 131/295 (44%), Gaps = 59/295 (20%)
Query: 7 QVFMAREIKTGEIVALK-----KIRMDNEKEGFPITAIR-EIKILKKLQHENVIKLKEIV 60
+V +A E KT + VA+K K + + +E P + EI+ILKKL H +IK+K
Sbjct: 25 EVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF 84
Query: 61 TSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRP--GLRFTVPQIKCYMKQLLT 118
D Y Y+V E M+ L D+ R K Y Q+L
Sbjct: 85 -------------DAEDY----YIVLELMEGG--ELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 119 GLHYCHVNQVLHRDIKGSNLLIDNEGN---LKLADFGLARSFSYDHNNTLTNRVITLWYR 175
+ Y H N ++HRD+K N+L+ ++ +K+ DFG ++ + + T Y
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTPTYL 183
Query: 176 PPELL--LGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIW 233
PE+L +G Y AVD WS+G I L+G P P Q+ S + I
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQV--------SLKDQIT 233
Query: 234 PGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDAL 288
G YN F P EV+ AL+L++K+L++DP R + ++AL
Sbjct: 234 SG-----KYN-FIP---------EVWAEVSEKALDLVKKLLVVDPKARFTTEEAL 273
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 131/295 (44%), Gaps = 59/295 (20%)
Query: 7 QVFMAREIKTGEIVALK-----KIRMDNEKEGFPITAIR-EIKILKKLQHENVIKLKEIV 60
+V +A E KT + VA+K K + + +E P + EI+ILKKL H +IK+K
Sbjct: 24 EVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF 83
Query: 61 TSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRP--GLRFTVPQIKCYMKQLLT 118
D Y Y+V E M+ L D+ R K Y Q+L
Sbjct: 84 -------------DAEDY----YIVLELMEGG--ELFDKVVGNKRLKEATCKLYFYQMLL 124
Query: 119 GLHYCHVNQVLHRDIKGSNLLIDNEGN---LKLADFGLARSFSYDHNNTLTNRVITLWYR 175
+ Y H N ++HRD+K N+L+ ++ +K+ DFG ++ + + T Y
Sbjct: 125 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTPTYL 182
Query: 176 PPELL--LGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIW 233
PE+L +G Y AVD WS+G I L+G P P Q+ S + I
Sbjct: 183 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQV--------SLKDQIT 232
Query: 234 PGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDAL 288
G YN F P EV+ AL+L++K+L++DP R + ++AL
Sbjct: 233 SG-----KYN-FIP---------EVWAEVSEKALDLVKKLLVVDPKARFTTEEAL 272
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 116/242 (47%), Gaps = 35/242 (14%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIR-EIKILKKLQHENVIKLKEIVTSP 63
S+VF+ ++ TG++ ALK I+ + F +++ EI +LKK++HEN++ L++I
Sbjct: 22 FSEVFLVKQRLTGKLFALKCIK---KSPAFRDSSLENEIAVLKKIKHENIVTLEDI---- 74
Query: 64 GPERDEQGRPDGNKYRGST--YMVFEYMDHDLTGLADRPGLR--FTVPQIKCYMKQLLTG 119
Y +T Y+V + + L DR R +T ++Q+L+
Sbjct: 75 --------------YESTTHYYLVMQLVSGG--ELFDRILERGVYTEKDASLVIQQVLSA 118
Query: 120 LHYCHVNQVLHRDIKGSNLLI---DNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRP 176
+ Y H N ++HRD+K NLL + + + DFGL++ + N ++ T Y
Sbjct: 119 VKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK---MEQNGIMSTACGTPGYVA 175
Query: 177 PELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGV 236
PE +L Y AVD WS+G I LL G P + E++ KI E + W +
Sbjct: 176 PE-VLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDI 234
Query: 237 SK 238
S+
Sbjct: 235 SE 236
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 126/295 (42%), Gaps = 50/295 (16%)
Query: 10 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDE 69
+ R+ ++ E+VA+K I E REI + L+H N+++ KE++ +P
Sbjct: 36 LMRDKQSNELVAVKYIE---RGEKIDENVKREIINHRSLRHPNIVRFKEVILTPT----- 87
Query: 70 QGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQV 128
+V EY +L G RF+ + + + +QL++G+ YCH QV
Sbjct: 88 -----------HLAIVMEYASGGELFERICNAG-RFSEDEARFFFQQLISGVSYCHAMQV 135
Query: 129 LHRDIKGSNLLIDNE--GNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
HRD+K N L+D LK+ DFG ++S S H+ + V T Y PE+LL
Sbjct: 136 CHRDLKLENTLLDGSPAPRLKICDFGYSKS-SVLHSQP-KSTVGTPAYIAPEVLLKKEYD 193
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
G D+WS G +L G E + K I +P Y H
Sbjct: 194 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI-------HRILNVQYAIPDYVHIS 246
Query: 247 PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCD 301
P RH L+ ++ + DP++RIS + + E+F + LP D
Sbjct: 247 PE----------CRH-------LISRIFVADPAKRISIPEIRNHEWFLKN-LPAD 283
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 32/209 (15%)
Query: 2 LVCISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVT 61
+VCI+ V +G++VA+KK MD K+ E+ I++ QHENV+++
Sbjct: 166 IVCIATVR-----SSGKLVAVKK--MDLRKQQRRELLFNEVVIMRDYQHENVVEMY---- 214
Query: 62 SPGPERDEQGRPDGNKYR--GSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLT 118
N Y ++V E+++ LT + R QI +L
Sbjct: 215 --------------NSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQ 258
Query: 119 GLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPE 178
L H V+HRDIK ++L+ ++G +KL+DFG S + V T ++ PE
Sbjct: 259 ALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPE 317
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKP 207
L+ YGP VD+WS+G + E+++G+P
Sbjct: 318 -LISRLPYGPEVDIWSLGIMVIEMVDGEP 345
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 87/191 (45%), Gaps = 32/191 (16%)
Query: 105 TVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNT 164
T P+ + +M+Q + G+ Y H N+V+HRD+K NL ++++ ++K+ DFGLA +D
Sbjct: 140 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK 199
Query: 165 LTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFEL 224
+ T Y PE+L + VD+WS+GCI LL GKP E +I
Sbjct: 200 -KDLCGTPNYIAPEVLC-KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI--- 254
Query: 225 CGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISA 284
K+ V RH + A L+ +ML DP+ R S
Sbjct: 255 ---------------------------KKNEYSVPRHINPVASALIRRMLHADPTLRPSV 287
Query: 285 KDALDSEYFWT 295
+ L E+F +
Sbjct: 288 AELLTDEFFTS 298
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 111/239 (46%), Gaps = 27/239 (11%)
Query: 4 CISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
S+V +A E TG++ A+K I K G + EI +L+K++HEN++ L++I SP
Sbjct: 34 AFSEVVLAEEKATGKLFAVKCIPKKALK-GKESSIENEIAVLRKIKHENIVALEDIYESP 92
Query: 64 GPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR--FTVPQIKCYMKQLLTGLH 121
Y+V + + L DR + +T ++Q+L ++
Sbjct: 93 N----------------HLYLVMQLVSG--GELFDRIVEKGFYTEKDASTLIRQVLDAVY 134
Query: 122 YCHVNQVLHRDIKGSNLLI---DNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPE 178
Y H ++HRD+K NLL D E + ++DFGL++ + ++ T Y PE
Sbjct: 135 YLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEG--KGDVMSTACGTPGYVAPE 192
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVS 237
+L Y AVD WS+G I LL G P +N+++ +I + D W +S
Sbjct: 193 VL-AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDIS 250
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 87/191 (45%), Gaps = 32/191 (16%)
Query: 105 TVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNT 164
T P+ + +M+Q + G+ Y H N+V+HRD+K NL ++++ ++K+ DFGLA +D
Sbjct: 124 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK 183
Query: 165 LTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFEL 224
+ T Y PE+L + VD+WS+GCI LL GKP E +I
Sbjct: 184 -KDLCGTPNYIAPEVLC-KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI--- 238
Query: 225 CGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISA 284
K+ V RH + A L+ +ML DP+ R S
Sbjct: 239 ---------------------------KKNEYSVPRHINPVASALIRRMLHADPTLRPSV 271
Query: 285 KDALDSEYFWT 295
+ L E+F +
Sbjct: 272 AELLTDEFFTS 282
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 32/209 (15%)
Query: 2 LVCISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVT 61
+VCI+ V +G++VA+KK MD K+ E+ I++ QHENV+++
Sbjct: 89 IVCIATVR-----SSGKLVAVKK--MDLRKQQRRELLFNEVVIMRDYQHENVVEMY---- 137
Query: 62 SPGPERDEQGRPDGNKYR--GSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLT 118
N Y ++V E+++ LT + R QI +L
Sbjct: 138 --------------NSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQ 181
Query: 119 GLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPE 178
L H V+HRDIK ++L+ ++G +KL+DFG S + V T ++ PE
Sbjct: 182 ALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPE 240
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKP 207
L+ YGP VD+WS+G + E+++G+P
Sbjct: 241 -LISRLPYGPEVDIWSLGIMVIEMVDGEP 268
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 87/193 (45%), Gaps = 36/193 (18%)
Query: 105 TVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYD--HN 162
T P+ + +M+Q + G+ Y H N+V+HRD+K NL ++++ ++K+ DFGLA +D
Sbjct: 140 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK 199
Query: 163 NTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIF 222
L T Y PE+L + VD+WS+GCI LL GKP E +I
Sbjct: 200 KXLCG---TPNYIAPEVLC-KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI- 254
Query: 223 ELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRI 282
K+ V RH + A L+ +ML DP+ R
Sbjct: 255 -----------------------------KKNEYSVPRHINPVASALIRRMLHADPTLRP 285
Query: 283 SAKDALDSEYFWT 295
S + L E+F +
Sbjct: 286 SVAELLTDEFFTS 298
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 131/295 (44%), Gaps = 59/295 (20%)
Query: 7 QVFMAREIKTGEIVALK-----KIRMDNEKEGFPITAIR-EIKILKKLQHENVIKLKEIV 60
+V +A E KT + VA++ K + + +E P + EI+ILKKL H +IK+K
Sbjct: 150 EVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF 209
Query: 61 TSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRP--GLRFTVPQIKCYMKQLLT 118
D Y Y+V E M+ L D+ R K Y Q+L
Sbjct: 210 -------------DAEDY----YIVLELMEGG--ELFDKVVGNKRLKEATCKLYFYQMLL 250
Query: 119 GLHYCHVNQVLHRDIKGSNLLIDNEGN---LKLADFGLARSFSYDHNNTLTNRVITLWYR 175
+ Y H N ++HRD+K N+L+ ++ +K+ DFG ++ + + T Y
Sbjct: 251 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTPTYL 308
Query: 176 PPELL--LGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIW 233
PE+L +G Y AVD WS+G I L+G P P Q+ S + I
Sbjct: 309 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQV--------SLKDQIT 358
Query: 234 PGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDAL 288
G YN F P EV+ AL+L++K+L++DP R + ++AL
Sbjct: 359 SG-----KYN-FIP---------EVWAEVSEKALDLVKKLLVVDPKARFTTEEAL 398
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 131/295 (44%), Gaps = 59/295 (20%)
Query: 7 QVFMAREIKTGEIVALK-----KIRMDNEKEGFPITAIR-EIKILKKLQHENVIKLKEIV 60
+V +A E KT + VA++ K + + +E P + EI+ILKKL H +IK+K
Sbjct: 164 EVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF 223
Query: 61 TSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRP--GLRFTVPQIKCYMKQLLT 118
D Y Y+V E M+ L D+ R K Y Q+L
Sbjct: 224 -------------DAEDY----YIVLELMEGG--ELFDKVVGNKRLKEATCKLYFYQMLL 264
Query: 119 GLHYCHVNQVLHRDIKGSNLLIDNEGN---LKLADFGLARSFSYDHNNTLTNRVITLWYR 175
+ Y H N ++HRD+K N+L+ ++ +K+ DFG ++ + + T Y
Sbjct: 265 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTPTYL 322
Query: 176 PPELL--LGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIW 233
PE+L +G Y AVD WS+G I L+G P P Q+ S + I
Sbjct: 323 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQV--------SLKDQIT 372
Query: 234 PGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDAL 288
G YN F P EV+ AL+L++K+L++DP R + ++AL
Sbjct: 373 SG-----KYN-FIP---------EVWAEVSEKALDLVKKLLVVDPKARFTTEEAL 412
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 32/209 (15%)
Query: 2 LVCISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVT 61
+VCI+ V +G++VA+KK MD K+ E+ I++ QHENV+++
Sbjct: 46 IVCIATVR-----SSGKLVAVKK--MDLRKQQRRELLFNEVVIMRDYQHENVVEMY---- 94
Query: 62 SPGPERDEQGRPDGNKYR--GSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLT 118
N Y ++V E+++ LT + R QI +L
Sbjct: 95 --------------NSYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQ 138
Query: 119 GLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPE 178
L H V+HRDIK ++L+ ++G +KL+DFG S + V T ++ PE
Sbjct: 139 ALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPE 197
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKP 207
L+ YGP VD+WS+G + E+++G+P
Sbjct: 198 -LISRLPYGPEVDIWSLGIMVIEMVDGEP 225
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 32/209 (15%)
Query: 2 LVCISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVT 61
+VCI+ V +G++VA+KK MD K+ E+ I++ QHENV+++
Sbjct: 44 IVCIATVR-----SSGKLVAVKK--MDLRKQQRRELLFNEVVIMRDYQHENVVEMY---- 92
Query: 62 SPGPERDEQGRPDGNKYR--GSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLT 118
N Y ++V E+++ LT + R QI +L
Sbjct: 93 --------------NSYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQ 136
Query: 119 GLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPE 178
L H V+HRDIK ++L+ ++G +KL+DFG S + V T ++ PE
Sbjct: 137 ALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPE 195
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKP 207
L+ YGP VD+WS+G + E+++G+P
Sbjct: 196 -LISRLPYGPEVDIWSLGIMVIEMVDGEP 223
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 103/220 (46%), Gaps = 25/220 (11%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V++ARE K+ IVALK + + EKEG REI+I L H N+++L
Sbjct: 39 VYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYD---- 94
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
R Y++ EY + F + M++L L YCH
Sbjct: 95 ------------RRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGK 142
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI--TLWYRPPELLLGAT 184
+V+HRDIK NLL+ +G LK+ADFG + H +L + + TL Y PPE++ G
Sbjct: 143 KVIHRDIKPENLLLGLKGELKIADFGWSV-----HAPSLRRKTMCGTLDYLPPEMIEGRM 197
Query: 185 KYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFEL 224
+ VD+W +G + ELL G P + E +I ++
Sbjct: 198 -HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV 236
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 125/295 (42%), Gaps = 50/295 (16%)
Query: 10 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDE 69
+ R+ ++ E+VA+K I E REI + L+H N+++ KE++ +P
Sbjct: 37 LMRDKQSNELVAVKYIE---RGEKIDENVKREIINHRSLRHPNIVRFKEVILTPT----- 88
Query: 70 QGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQV 128
+V EY +L G RF+ + + + +QL++G+ YCH QV
Sbjct: 89 -----------HLAIVMEYASGGELFERICNAG-RFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 129 LHRDIKGSNLLIDNE--GNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
HRD+K N L+D LK+ FG ++S S H+ + V T Y PE+LL
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSKS-SVLHSQP-KDTVGTPAYIAPEVLLKKEYD 194
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
G D+WS G +L G E + K I +P Y H
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI-------HRILNVQYAIPDYVHIS 247
Query: 247 PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCD 301
P RH L+ ++ + DP++RIS + + E+F + LP D
Sbjct: 248 PE----------CRH-------LISRIFVADPAKRISIPEIRNHEWFLKN-LPAD 284
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 130/293 (44%), Gaps = 50/293 (17%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V +ARE +G VA+K MD K+ E+ I++ QH NV+++ + G E
Sbjct: 61 VCLAREKHSGRQVAVKM--MDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLV-GEE- 116
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
+++ E++ LT + + +R QI + +L L Y H
Sbjct: 117 --------------LWVLMEFLQGGALTDIVSQ--VRLNEEQIATVCEAVLQALAYLHAQ 160
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
V+HRDIK ++L+ +G +KL+DFG S D V T ++ PE ++ + Y
Sbjct: 161 GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR-KXLVGTPYWMAPE-VISRSLY 218
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
VD+WS+G + E+++G+P + + + ++ + SP
Sbjct: 219 ATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD---SP-----------------P 258
Query: 247 PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLP 299
P +V V R F LE+ML+ DP +R +A++ LD + LP
Sbjct: 259 PKLKNSHKVSPVLRDF-------LERMLVRDPQERATAQELLDHPFLLQTGLP 304
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 32/209 (15%)
Query: 2 LVCISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVT 61
+VCI+ V +G++VA+KK MD K+ E+ I++ QHENV+++
Sbjct: 39 IVCIATVR-----SSGKLVAVKK--MDLRKQQRRELLFNEVVIMRDYQHENVVEMY---- 87
Query: 62 SPGPERDEQGRPDGNKYR--GSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLT 118
N Y ++V E+++ LT + R QI +L
Sbjct: 88 --------------NSYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQ 131
Query: 119 GLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPE 178
L H V+HRDIK ++L+ ++G +KL+DFG S + V T ++ PE
Sbjct: 132 ALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPE 190
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKP 207
L+ YGP VD+WS+G + E+++G+P
Sbjct: 191 -LISRLPYGPEVDIWSLGIMVIEMVDGEP 218
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 125/295 (42%), Gaps = 50/295 (16%)
Query: 10 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDE 69
+ R+ ++ E+VA+K I E REI + L+H N+++ KE++ +P
Sbjct: 37 LMRDKQSNELVAVKYIE---RGEKIDENVKREIINHRSLRHPNIVRFKEVILTPT----- 88
Query: 70 QGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQV 128
+V EY +L G RF+ + + + +QL++G+ YCH QV
Sbjct: 89 -----------HLAIVMEYASGGELFERICNAG-RFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 129 LHRDIKGSNLLIDNE--GNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
HRD+K N L+D LK+ FG ++S S H+ + V T Y PE+LL
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSKS-SVLHSQP-KSTVGTPAYIAPEVLLKKEYD 194
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
G D+WS G +L G E + K I +P Y H
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI-------HRILNVQYAIPDYVHIS 247
Query: 247 PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCD 301
P RH L+ ++ + DP++RIS + + E+F + LP D
Sbjct: 248 PE----------CRH-------LISRIFVADPAKRISIPEIRNHEWFLKN-LPAD 284
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 32/209 (15%)
Query: 2 LVCISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVT 61
+VCI+ V +G++VA+KK MD K+ E+ I++ QHENV+++
Sbjct: 35 IVCIATVR-----SSGKLVAVKK--MDLRKQQRRELLFNEVVIMRDYQHENVVEMY---- 83
Query: 62 SPGPERDEQGRPDGNKYR--GSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLT 118
N Y ++V E+++ LT + R QI +L
Sbjct: 84 --------------NSYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQ 127
Query: 119 GLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPE 178
L H V+HRDIK ++L+ ++G +KL+DFG S + V T ++ PE
Sbjct: 128 ALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPE 186
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKP 207
L+ YGP VD+WS+G + E+++G+P
Sbjct: 187 -LISRLPYGPEVDIWSLGIMVIEMVDGEP 214
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
QV AR A+KKIR EK T + E+ +L L H+ V++ + E
Sbjct: 21 QVVKARNALDSRYYAIKKIRHTEEKLS---TILSEVMLLASLNHQYVVR----YYAAWLE 73
Query: 67 RDEQGRP-DGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCH 124
R +P K + + ++ EY ++ L L L + +Q+L L Y H
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH 133
Query: 125 VNQVLHRDIKGSNLLIDNEGNLKLADFGLARS-------FSYDHNN------TLTNRVIT 171
++HRD+K N+ ID N+K+ DFGLA++ D N LT+ + T
Sbjct: 134 SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGT 193
Query: 172 LWYRPPELLLGATKYGPAVDMWSVGCIFAELL 203
Y E+L G Y +DM+S+G IF E++
Sbjct: 194 AMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
QV AR A+KKIR EK T + E+ +L L H+ V++ + E
Sbjct: 21 QVVKARNALDSRYYAIKKIRHTEEKLS---TILSEVMLLASLNHQYVVR----YYAAWLE 73
Query: 67 RDEQGRP-DGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCH 124
R +P K + + ++ EY ++ L L L + +Q+L L Y H
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH 133
Query: 125 VNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF--SYD-----------HNNTLTNRVIT 171
++HRD+K N+ ID N+K+ DFGLA++ S D ++ LT+ + T
Sbjct: 134 SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGT 193
Query: 172 LWYRPPELLLGATKYGPAVDMWSVGCIFAELL 203
Y E+L G Y +DM+S+G IF E++
Sbjct: 194 AMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 88/196 (44%), Gaps = 29/196 (14%)
Query: 16 TGEIVALKKIRMD---NEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGR 72
TGE+VA+K ++ D + G+ +EI IL+ L HE++IK K G
Sbjct: 59 TGEMVAVKALKADAGPQHRSGWK----QEIDILRTLYHEHIIKYKGCCEDAGA------- 107
Query: 73 PDGNKYRGSTYMVFEYMDHDLTGLADR-PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHR 131
S +V EY+ L L D P + Q+ + +Q+ G+ Y H +HR
Sbjct: 108 -------ASLQLVMEYVP--LGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHR 158
Query: 132 DIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR---VITLWYRPPELLLGATKYGP 188
D+ N+L+DN+ +K+ DFGLA++ H WY P L K+
Sbjct: 159 DLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPE--CLKEYKFYY 216
Query: 189 AVDMWSVGCIFAELLN 204
A D+WS G ELL
Sbjct: 217 ASDVWSFGVTLYELLT 232
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 101/223 (45%), Gaps = 21/223 (9%)
Query: 4 CISQVFMAREIK---TGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIV 60
+VF+ R++ +G + A+K ++ K + E IL + H V+KL
Sbjct: 40 SFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKLHYAF 99
Query: 61 TSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGL 120
+ G Y++ +++ + FT +K Y+ +L GL
Sbjct: 100 QT----------------EGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGL 143
Query: 121 HYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELL 180
+ H +++RD+K N+L+D EG++KL DFGL++ + DH + T+ Y PE +
Sbjct: 144 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE-AIDHEKKAYSFCGTVEYMAPE-V 201
Query: 181 LGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFE 223
+ + + D WS G + E+L G GK+ E ++ I +
Sbjct: 202 VNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILK 244
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 131/287 (45%), Gaps = 50/287 (17%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ A ++ TG+ VA++++ + + + I I EI ++++ ++ N++
Sbjct: 36 VYTAMDVATGQEVAIRQMNLQQQPKKELI--INEILVMRENKNPNIV------------- 80
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D ++V EY+ LT + + QI ++ L L + H N
Sbjct: 81 ---NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCM--DEGQIAAVCRECLQALEFLHSN 135
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
QV+HRDIK N+L+ +G++KL DFG + + + T V T ++ PE ++ Y
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPE-VVTRKAY 193
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
GP VD+WS+G + E++ G+P P NE +P ++ + A N
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEP--PYLNE------------NPLRALY-----LIATNG-T 233
Query: 247 PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
P ++ +FR F L + L +D +R SAK+ L ++
Sbjct: 234 PELQNPEKLSAIFRDF-------LNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 125/295 (42%), Gaps = 50/295 (16%)
Query: 10 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDE 69
+ R+ + E+VA+K I E REI + L+H N+++ KE++ +P
Sbjct: 37 LMRDKQANELVAVKYI---ERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPT----- 88
Query: 70 QGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQV 128
+V EY +L G RF+ + + + +QL++G+ Y H QV
Sbjct: 89 -----------HLAIVMEYASGGELFERICNAG-RFSEDEARFFFQQLISGVSYAHAMQV 136
Query: 129 LHRDIKGSNLLIDNE--GNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
HRD+K N L+D LK+ADFG +++ S H+ + V T Y PE+LL
Sbjct: 137 AHRDLKLENTLLDGSPAPRLKIADFGYSKA-SVLHSQP-KSAVGTPAYIAPEVLLKKEYD 194
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
G D+WS G +L G E + K I +P Y H
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI-------HRILNVQYAIPDYVHIS 247
Query: 247 PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCD 301
P RH L+ ++ + DP++RIS + + E+F + LP D
Sbjct: 248 PE----------CRH-------LISRIFVADPAKRISIPEIRNHEWFLKN-LPAD 284
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 130/287 (45%), Gaps = 50/287 (17%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ A ++ TG+ VA++++ + + + I I EI ++++ ++ N++
Sbjct: 36 VYTAMDVATGQEVAIRQMNLQQQPKKELI--INEILVMRENKNPNIV------------- 80
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D ++V EY+ LT + + QI ++ L L + H N
Sbjct: 81 ---NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCM--DEGQIAAVCRECLQALEFLHSN 135
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
QV+HRDIK N+L+ +G++KL DFG + + + + V T ++ PE ++ Y
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-SXMVGTPYWMAPE-VVTRKAY 193
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
GP VD+WS+G + E++ G+P P NE +P ++ + A N
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEP--PYLNE------------NPLRALY-----LIATNG-T 233
Query: 247 PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
P ++ +FR F LE +D +R SAK+ L ++
Sbjct: 234 PELQNPEKLSAIFRDFLNRCLE-------MDVEKRGSAKELLQHQFL 273
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 131/287 (45%), Gaps = 50/287 (17%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ A ++ TG+ VA++++ + + + I I EI ++++ ++ N++
Sbjct: 36 VYTAMDVATGQEVAIRQMNLQQQPKKELI--INEILVMRENKNPNIV------------- 80
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D ++V EY+ LT + + QI ++ L L + H N
Sbjct: 81 ---NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCM--DEGQIAAVCRECLQALEFLHSN 135
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
QV+HRDIK N+L+ +G++KL DFG + + + + V T ++ PE ++ Y
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-SEMVGTPYWMAPE-VVTRKAY 193
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
GP VD+WS+G + E++ G+P P NE +P ++ + A N
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEP--PYLNE------------NPLRALY-----LIATNG-T 233
Query: 247 PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
P ++ +FR F L + L +D +R SAK+ L ++
Sbjct: 234 PELQNPEKLSAIFRDF-------LNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 110/273 (40%), Gaps = 58/273 (21%)
Query: 40 REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTG--LA 97
+EI+I+K L H N+I+L E Y+V E TG L
Sbjct: 72 QEIEIMKSLDHPNIIRLYETFED----------------NTDIYLVMEL----CTGGELF 111
Query: 98 DRPGLR--FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDN---EGNLKLADFG 152
+R + F MK +L+ + YCH V HRD+K N L + LKL DFG
Sbjct: 112 ERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFG 171
Query: 153 LARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGK 212
LA F + +V T +Y P++L G YGP D WS G + LL G P
Sbjct: 172 LAARFK--PGKMMRTKVGTPYYVSPQVLEGL--YGPECDEWSAGVMMYVLLCGYPPFSAP 227
Query: 213 NEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEK 272
+ E + KI E + E W VS A L+ +
Sbjct: 228 TDXEVMLKIREGTFTFPEKDWLNVSP--------------------------QAESLIRR 261
Query: 273 MLMLDPSQRISAKDALDSEYFWTDPLPCDPKSL 305
+L P QRI++ AL+ E+F L P++L
Sbjct: 262 LLTKSPKQRITSLQALEHEWF-EKQLSSSPRNL 293
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 15/223 (6%)
Query: 83 YMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID 141
Y V EY++ DL + G +F PQ Y ++ GL + H +++RD+K N+++D
Sbjct: 96 YFVMEYVNGGDLMYHIQQVG-KFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLD 154
Query: 142 NEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAE 201
+EG++K+ADFG+ + D T T Y PE ++ YG +VD W+ G + E
Sbjct: 155 SEGHIKIADFGMCKEHMMD-GVTTREFCGTPDYIAPE-IIAYQPYGKSVDWWAYGVLLYE 212
Query: 202 LLNGKPILPGKNEAEQLSKIFELCGS-PDETIWPGVSKMPAYNHFKPSRTM------KRR 254
+L G+P G++E E I E S P VS P++ + +R
Sbjct: 213 MLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPAKRLGCGPEGERD 272
Query: 255 VRE--VFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWT 295
VRE FR D LE E P ++ K A + + F+T
Sbjct: 273 VREHAFFRRIDWEKLENREIQPPFKP--KVCGKGAENFDKFFT 313
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 105/261 (40%), Gaps = 57/261 (21%)
Query: 40 REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTG--LA 97
+EI+I+K L H N+I+L E Y+V E TG L
Sbjct: 55 QEIEIMKSLDHPNIIRLYETFED----------------NTDIYLVMEL----CTGGELF 94
Query: 98 DRPGLR--FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDN---EGNLKLADFG 152
+R + F MK +L+ + YCH V HRD+K N L + LKL DFG
Sbjct: 95 ERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFG 154
Query: 153 LARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGK 212
LA F + +V T +Y P++L G YGP D WS G + LL G P
Sbjct: 155 LAARFK--PGKMMRTKVGTPYYVSPQVLEGL--YGPECDEWSAGVMMYVLLCGYPPFSAP 210
Query: 213 NEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEK 272
+ E + KI E + E W VS A L+ +
Sbjct: 211 TDXEVMLKIREGTFTFPEKDWLNVSP--------------------------QAESLIRR 244
Query: 273 MLMLDPSQRISAKDALDSEYF 293
+L P QRI++ AL+ E+F
Sbjct: 245 LLTKSPKQRITSLQALEHEWF 265
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 26/195 (13%)
Query: 16 TGEIVALKKIRMD--NEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRP 73
TG +VA+K+++ +++ F REI+ILK L + ++K + + PG
Sbjct: 38 TGALVAVKQLQHSGPDQQRDFQ----REIQILKALHSDFIVKYRGVSYGPG--------- 84
Query: 74 DGNKYRGSTYMVFEYM-DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRD 132
R S +V EY+ L R R ++ Y Q+ G+ Y + +HRD
Sbjct: 85 -----RQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 139
Query: 133 IKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN---RVITLWYRPPELLLGATKYGPA 189
+ N+L+++E ++K+ADFGLA+ D + + + WY P L +
Sbjct: 140 LAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES--LSDNIFSRQ 197
Query: 190 VDMWSVGCIFAELLN 204
D+WS G + EL
Sbjct: 198 SDVWSFGVVLYELFT 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 26/195 (13%)
Query: 16 TGEIVALKKIRMD--NEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRP 73
TG +VA+K+++ +++ F REI+ILK L + ++K + + PG
Sbjct: 51 TGALVAVKQLQHSGPDQQRDFQ----REIQILKALHSDFIVKYRGVSYGPG--------- 97
Query: 74 DGNKYRGSTYMVFEYM-DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRD 132
R S +V EY+ L R R ++ Y Q+ G+ Y + +HRD
Sbjct: 98 -----RQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 152
Query: 133 IKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN---RVITLWYRPPELLLGATKYGPA 189
+ N+L+++E ++K+ADFGLA+ D + + + WY P L +
Sbjct: 153 LAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES--LSDNIFSRQ 210
Query: 190 VDMWSVGCIFAELLN 204
D+WS G + EL
Sbjct: 211 SDVWSFGVVLYELFT 225
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 42/226 (18%)
Query: 8 VFMAREIKTGEIVALKKI----RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
V+ AR+++ E+VA+KK+ + NEK I+E++ L+KL+H N I+
Sbjct: 70 VYFARDVRNSEVVAIKKMSYSGKQSNEKWQ---DIIKEVRFLQKLRHPNTIQ-------- 118
Query: 64 GPERDEQGRPDGNKYRG------STYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLL 117
YRG + ++V EY + L + +I L
Sbjct: 119 --------------YRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGAL 164
Query: 118 TGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPP 177
GL Y H + ++HRD+K N+L+ G +KL DFG A + V T ++ P
Sbjct: 165 QGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA-----PANXFVGTPYWMAP 219
Query: 178 ELLLGAT--KYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
E++L +Y VD+WS+G EL KP L N L I
Sbjct: 220 EVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI 265
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 26/195 (13%)
Query: 16 TGEIVALKKIRMD--NEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRP 73
TG +VA+K+++ +++ F REI+ILK L + ++K + + PG
Sbjct: 39 TGALVAVKQLQHSGPDQQRDFQ----REIQILKALHSDFIVKYRGVSYGPG--------- 85
Query: 74 DGNKYRGSTYMVFEYMDHD-LTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRD 132
R S +V EY+ L R R ++ Y Q+ G+ Y + +HRD
Sbjct: 86 -----RQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 140
Query: 133 IKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN---RVITLWYRPPELLLGATKYGPA 189
+ N+L+++E ++K+ADFGLA+ D + + + WY P L +
Sbjct: 141 LAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES--LSDNIFSRQ 198
Query: 190 VDMWSVGCIFAELLN 204
D+WS G + EL
Sbjct: 199 SDVWSFGVVLYELFT 213
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 119/305 (39%), Gaps = 87/305 (28%)
Query: 11 AREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIV---------- 60
R I+ +I+ KIR N K+ I E++++KKL H N+ +L E+
Sbjct: 50 TRAIRAIKIMNKNKIRQINPKDVERIKT--EVRLMKKLHHPNIARLYEVYEDEQYICLVM 107
Query: 61 -------------------------------TSPGPERDEQGRPDGNKYRGSTYMVFEYM 89
P PE +E+ GS + E +
Sbjct: 108 ELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEA------INGSIHGFRESL 161
Query: 90 DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGN--LK 147
D R L I M+Q+ + LHY H + HRDIK N L + +K
Sbjct: 162 D-----FVQREKL------ISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIK 210
Query: 148 LADFGLARSFSYDHNNT----LTNRVITLWYRPPELLLGATK-YGPAVDMWSVGCIFAEL 202
L DFGL++ F Y NN +T + T ++ PE+L + YGP D WS G + L
Sbjct: 211 LVDFGLSKEF-YKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLL 269
Query: 203 LNGKPILPGKNEAEQLSKIF--ELCGSPDETIWPGVSKMPAYNHFKP------SRTMKRR 254
L G PG N+A+ +S++ +LC P YN P S + R
Sbjct: 270 LMGAVPFPGVNDADTISQVLNKKLCFEN-----------PNYNVLSPLARDLLSNLLNRN 318
Query: 255 VREVF 259
V E F
Sbjct: 319 VDERF 323
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 23/201 (11%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ A ++ TG+ VA++++ + + + I I EI ++++ ++ N++
Sbjct: 37 VYTAMDVATGQEVAIRQMNLQQQPKKELI--INEILVMRENKNPNIV------------- 81
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D ++V EY+ LT + + QI ++ L L + H N
Sbjct: 82 ---NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCM--DEGQIAAVCRECLQALEFLHSN 136
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
QV+HRDIK N+L+ +G++KL DFG + + + + V T ++ PE ++ Y
Sbjct: 137 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-SXMVGTPYWMAPE-VVTRKAY 194
Query: 187 GPAVDMWSVGCIFAELLNGKP 207
GP VD+WS+G + E++ G+P
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEP 215
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 121/288 (42%), Gaps = 57/288 (19%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNE-KEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
S V +ARE+ T A+K + + KE RE ++ +L H +KL
Sbjct: 45 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF--- 101
Query: 64 GPERDEQGRPDGNKYRGSTYM----VFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTG 119
+ D Y G +Y + +Y+ G D RF Y ++++
Sbjct: 102 --------QDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF-------YTAEIVSA 144
Query: 120 LHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPE 178
L Y H ++HRD+K N+L++ + ++++ DFG A+ S + N + T Y PE
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK 238
LL + + D+W++GCI +L+ G P NE +KI +L E +P
Sbjct: 205 LLTEKSAXKSS-DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFP---- 259
Query: 239 MPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKD 286
A +L+EK+L+LD ++R+ ++
Sbjct: 260 --------------------------KARDLVEKLLVLDATKRLGCEE 281
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 126/289 (43%), Gaps = 57/289 (19%)
Query: 2 LVCISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVT 61
+VCI A E TG+ VA+KK MD K+ E+ I++ H+NV+ +
Sbjct: 60 IVCI-----ATEKHTGKQVAVKK--MDLRKQQRRELLFNEVVIMRDYHHDNVVDM----Y 108
Query: 62 SPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGL 120
S DE ++V E+++ LT + R QI +L L
Sbjct: 109 SSYLVGDE------------LWVVMEFLEGGALTDIVTHT--RMNEEQIATVCLSVLRAL 154
Query: 121 HYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELL 180
Y H V+HRDIK ++L+ ++G +KL+DFG S + V T ++ PE +
Sbjct: 155 SYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKR-KXLVGTPYWMAPE-V 212
Query: 181 LGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMP 240
+ YG VD+WS+G + E+++G+P P NE P + M
Sbjct: 213 ISRLPYGTEVDIWSLGIMVIEMIDGEP--PYFNE-------------------PPLQAMR 251
Query: 241 AYNHFKPSRTMK-RRVREVFRHFDRHALELLEKMLMLDPSQRISAKDAL 288
P R +V V R F L+ ML+ +PSQR +A++ L
Sbjct: 252 RIRDSLPPRVKDLHKVSSVLRGF-------LDLMLVREPSQRATAQELL 293
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 114/226 (50%), Gaps = 31/226 (13%)
Query: 7 QVFMAREI---KTGEIVALKKIR----MDNEKEGFPITAIREIKILKKLQHENVIKLKEI 59
+VF R++ TG+I A+K ++ + N K+ A R IL++++H ++ L
Sbjct: 32 KVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER--NILEEVKHPFIVDLIYA 89
Query: 60 VTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLT 118
+ G Y++ EY+ +L +R G+ F Y+ ++
Sbjct: 90 FQTGG----------------KLYLILEYLSGGELFMQLEREGI-FMEDTACFYLAEISM 132
Query: 119 GLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPP 177
L + H +++RD+K N++++++G++KL DFGL + H+ T+T+ T+ Y P
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTFCGTIEYMAP 190
Query: 178 ELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFE 223
E+L+ + + AVD WS+G + ++L G P G+N + + KI +
Sbjct: 191 EILM-RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILK 235
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 114/226 (50%), Gaps = 31/226 (13%)
Query: 7 QVFMAREI---KTGEIVALKKIR----MDNEKEGFPITAIREIKILKKLQHENVIKLKEI 59
+VF R++ TG+I A+K ++ + N K+ A R IL++++H ++ L
Sbjct: 32 KVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER--NILEEVKHPFIVDLIYA 89
Query: 60 VTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLT 118
+ G Y++ EY+ +L +R G+ F Y+ ++
Sbjct: 90 FQTGG----------------KLYLILEYLSGGELFMQLEREGI-FMEDTACFYLAEISM 132
Query: 119 GLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPP 177
L + H +++RD+K N++++++G++KL DFGL + H+ T+T+ T+ Y P
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXFCGTIEYMAP 190
Query: 178 ELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFE 223
E+L+ + + AVD WS+G + ++L G P G+N + + KI +
Sbjct: 191 EILM-RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILK 235
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 42/226 (18%)
Query: 8 VFMAREIKTGEIVALKKI----RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
V+ AR+++ E+VA+KK+ + NEK I+E++ L+KL+H N I+
Sbjct: 31 VYFARDVRNSEVVAIKKMSYSGKQSNEKWQ---DIIKEVRFLQKLRHPNTIQ-------- 79
Query: 64 GPERDEQGRPDGNKYRG------STYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLL 117
YRG + ++V EY + L + +I L
Sbjct: 80 --------------YRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGAL 125
Query: 118 TGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPP 177
GL Y H + ++HRD+K N+L+ G +KL DFG A + V T ++ P
Sbjct: 126 QGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA-----PANXFVGTPYWMAP 180
Query: 178 ELLLGAT--KYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
E++L +Y VD+WS+G EL KP L N L I
Sbjct: 181 EVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI 226
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 124/294 (42%), Gaps = 67/294 (22%)
Query: 6 SQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGP 65
S V+ ++ T + ALK ++ +K+ EI +L +L H N+IKLKEI +P
Sbjct: 67 SIVYRCKQKGTQKPYALKVLKKTVDKK----IVRTEIGVLLRLSHPNIIKLKEIFETPTE 122
Query: 66 ERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHV 125
G + Y + D AD +KQ+L + Y H
Sbjct: 123 ISLVLELVTGGELFDRIVEKGYYSERDA---ADA-------------VKQILEAVAYLHE 166
Query: 126 NQVLHRDIKGSNLLIDN---EGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLG 182
N ++HRD+K NLL + LK+ADFGL++ +H + T Y PE+L G
Sbjct: 167 NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV--EHQVLMKTVCGTPGYCAPEILRG 224
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY 242
YGP VDMWSVG I LL G FE P Y
Sbjct: 225 CA-YGPEVDMWSVGIITYILLCG----------------FE----------------PFY 251
Query: 243 NHFKPSRTMKRRVREVFRHF--------DRHALELLEKMLMLDPSQRISAKDAL 288
+ + + M RR+ +F +A +L+ K+++LDP +R++ AL
Sbjct: 252 DE-RGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQAL 304
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 121/288 (42%), Gaps = 57/288 (19%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNE-KEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
S V +ARE+ T A+K + + KE RE ++ +L H +KL
Sbjct: 45 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF--- 101
Query: 64 GPERDEQGRPDGNKYRGSTYM----VFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTG 119
+ D Y G +Y + +Y+ G D RF Y ++++
Sbjct: 102 --------QDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF-------YTAEIVSA 144
Query: 120 LHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPE 178
L Y H ++HRD+K N+L++ + ++++ DFG A+ S + N + T Y PE
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK 238
LL + + D+W++GCI +L+ G P NE +KI +L E +P
Sbjct: 205 LLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFP---- 259
Query: 239 MPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKD 286
A +L+EK+L+LD ++R+ ++
Sbjct: 260 --------------------------KARDLVEKLLVLDATKRLGCEE 281
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 103/218 (47%), Gaps = 24/218 (11%)
Query: 8 VFMAREIKTGEIVALKKI-RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
V+ A I TG VA+K I + K G E+KI +L+H ++++L
Sbjct: 27 VYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYF------ 80
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHV 125
D N Y+V E + + ++ F+ + + +M Q++TG+ Y H
Sbjct: 81 ------EDSN----YVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS 130
Query: 126 NQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATK 185
+ +LHRD+ SNLL+ N+K+ADFGLA H T T Y PE+ AT+
Sbjct: 131 HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTPNYISPEI---ATR 186
Query: 186 --YGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
+G D+WS+GC+F LL G+P L+K+
Sbjct: 187 SAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV 224
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 84/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYM-DHDLTG 95
+K L + V+KLK+I + +R Q K + YMV EYM D+
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +K+ADFG A+
Sbjct: 131 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 190 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 84/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYM-DHDLTG 95
+K L + V+KLK+I + +R Q K + YMV EYM D+
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +K+ADFG A+
Sbjct: 131 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 190 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 57/288 (19%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNE-KEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
S V +ARE+ T A+K + + KE RE ++ +L H +KL
Sbjct: 45 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF--- 101
Query: 64 GPERDEQGRPDGNKYRGSTY----MVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTG 119
+ D Y G +Y + +Y+ G D RF Y ++++
Sbjct: 102 --------QDDEKLYFGLSYAKNGCLLKYIRK--IGSFDETCTRF-------YTAEIVSA 144
Query: 120 LHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPE 178
L Y H ++HRD+K N+L++ + ++++ DFG A+ S + N + T Y PE
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 204
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK 238
LL + + D+W++GCI +L+ G P NE KI +L E +P
Sbjct: 205 LLTEKSA-SKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP---- 259
Query: 239 MPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKD 286
A +L+EK+L+LD ++R+ ++
Sbjct: 260 --------------------------KARDLVEKLLVLDATKRLGCEE 281
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 21/228 (9%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V +AR +TG++ A+K ++ D + + K + L + + P+
Sbjct: 38 KVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD 97
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
R + V E+++ + RF + + Y ++++ L + H
Sbjct: 98 R--------------LFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK 143
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+++RD+K N+L+D+EG+ KLADFG+ + + T T Y PE +L Y
Sbjct: 144 GIIYRDLKLDNVLLDHEGHCKLADFGMCKE-GICNGVTTATFCGTPDYIAPE-ILQEMLY 201
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWP 234
GPAVD W++G + E+L G +NE + I DE ++P
Sbjct: 202 GPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN-----DEVVYP 244
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 94/212 (44%), Gaps = 24/212 (11%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLK--------- 57
QVF A+ G+ +++++ +NEK A RE+K L KL H N++
Sbjct: 27 QVFKAKHRIDGKTYVIRRVKYNNEK------AEREVKALAKLDHVNIVHYNGCWDGFDYD 80
Query: 58 -EIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTG-----LADRPGLRFTVPQIKC 111
E D N R T +F M+ G + R G +
Sbjct: 81 PETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 140
Query: 112 YMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVIT 171
+Q+ G+ Y H +++HRD+K SN+ + + +K+ DFGL S D T + T
Sbjct: 141 LFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKG--T 198
Query: 172 LWYRPPELLLGATKYGPAVDMWSVGCIFAELL 203
L Y PE + + YG VD++++G I AELL
Sbjct: 199 LRYMSPE-QISSQDYGKEVDLYALGLILAELL 229
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 30/211 (14%)
Query: 14 IKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRP 73
+ ++ A+ I + K+ F +EIK++ K QHEN+++L
Sbjct: 57 VAVKKLAAMVDITTEELKQQFD----QEIKVMAKCQHENLVELLGF------------SS 100
Query: 74 DGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVP----QIKCYMKQ-LLTGLHYCHVNQV 128
DG+ +V+ YM + L DR P ++C + Q G+++ H N
Sbjct: 101 DGDDL----CLVYVYMPNG--SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 154
Query: 129 LHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPELLLGATKYG 187
+HRDIK +N+L+D K++DFGLAR+ + +R++ T Y PE L G +
Sbjct: 155 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRG--EIT 212
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQL 218
P D++S G + E++ G P + E + L
Sbjct: 213 PKSDIYSFGVVLLEIITGLPAVDEHREPQLL 243
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 130/287 (45%), Gaps = 50/287 (17%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ A ++ TG+ VA++++ + + + I I EI ++++ ++ N++
Sbjct: 37 VYTAMDVATGQEVAIRQMNLQQQPKKELI--INEILVMRENKNPNIV------------- 81
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
D ++V EY+ LT + + QI ++ L L + H N
Sbjct: 82 ---NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCM--DEGQIAAVCRECLQALEFLHSN 136
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
QV+HR+IK N+L+ +G++KL DFG + + + T V T ++ PE ++ Y
Sbjct: 137 QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPE-VVTRKAY 194
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
GP VD+WS+G + E++ G+P P NE +P ++ + A N
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEP--PYLNE------------NPLRALY-----LIATNG-T 234
Query: 247 PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
P ++ +FR F LE +D +R SAK+ + ++
Sbjct: 235 PELQNPEKLSAIFRDFLNRCLE-------MDVEKRGSAKELIQHQFL 274
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 26/195 (13%)
Query: 16 TGEIVALKKIRMD--NEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRP 73
TG +VA+K+++ +++ F REI+ILK L + ++K + + PG
Sbjct: 35 TGALVAVKQLQHSGPDQQRDFQ----REIQILKALHSDFIVKYRGVSYGPG--------- 81
Query: 74 DGNKYRGSTYMVFEYMDHD-LTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRD 132
R +V EY+ L R R ++ Y Q+ G+ Y + +HRD
Sbjct: 82 -----RPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 136
Query: 133 IKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN---RVITLWYRPPELLLGATKYGPA 189
+ N+L+++E ++K+ADFGLA+ D + + + WY P L +
Sbjct: 137 LAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPES--LSDNIFSRQ 194
Query: 190 VDMWSVGCIFAELLN 204
D+WS G + EL
Sbjct: 195 SDVWSFGVVLYELFT 209
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 125/290 (43%), Gaps = 53/290 (18%)
Query: 4 CISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
S+V +A + +T ++VA+K I EG + EI +L K++H N++ L +I S
Sbjct: 30 AFSEVILAEDKRTQKLVAIKCI-AKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESG 88
Query: 64 GPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR--FTVPQIKCYMKQLLTGLH 121
G Y++ + + L DR + +T + Q+L +
Sbjct: 89 G----------------HLYLIMQLVSG--GELFDRIVEKGFYTERDASRLIFQVLDAVK 130
Query: 122 YCHVNQVLHRDIKGSNLL---IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPE 178
Y H ++HRD+K NLL +D + + ++DFGL++ D + L+ T Y PE
Sbjct: 131 YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPE 188
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK 238
+L Y AVD WS+G I LL G P +N+A+ +I + D W +S
Sbjct: 189 VL-AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 239 MPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDAL 288
+ F RH L+EK DP +R + + AL
Sbjct: 248 SA-------------------KDFIRH---LMEK----DPEKRFTCEQAL 271
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 57/288 (19%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNE-KEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
S V +ARE+ T A+K + + KE RE ++ +L H +KL
Sbjct: 46 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF--- 102
Query: 64 GPERDEQGRPDGNKYRGSTYM----VFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTG 119
+ D Y G +Y + +Y+ G D RF Y ++++
Sbjct: 103 --------QDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF-------YTAEIVSA 145
Query: 120 LHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPE 178
L Y H ++HRD+K N+L++ + ++++ DFG A+ S + N + T Y PE
Sbjct: 146 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 205
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK 238
LL + + D+W++GCI +L+ G P NE KI +L E +P
Sbjct: 206 LLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP---- 260
Query: 239 MPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKD 286
A +L+EK+L+LD ++R+ ++
Sbjct: 261 --------------------------KARDLVEKLLVLDATKRLGCEE 282
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 57/288 (19%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNE-KEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
S V +ARE+ T A+K + + KE RE ++ +L H +KL
Sbjct: 46 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF--- 102
Query: 64 GPERDEQGRPDGNKYRGSTYM----VFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTG 119
+ D Y G +Y + +Y+ G D RF Y ++++
Sbjct: 103 --------QDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF-------YTAEIVSA 145
Query: 120 LHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPE 178
L Y H ++HRD+K N+L++ + ++++ DFG A+ S + N + T Y PE
Sbjct: 146 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 205
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK 238
LL + + D+W++GCI +L+ G P NE KI +L E +P
Sbjct: 206 LLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP---- 260
Query: 239 MPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKD 286
A +L+EK+L+LD ++R+ ++
Sbjct: 261 --------------------------KARDLVEKLLVLDATKRLGCEE 282
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 57/288 (19%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNE-KEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
S V +ARE+ T A+K + + KE RE ++ +L H +KL
Sbjct: 45 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF--- 101
Query: 64 GPERDEQGRPDGNKYRGSTYM----VFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTG 119
+ D Y G +Y + +Y+ G D RF Y ++++
Sbjct: 102 --------QDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF-------YTAEIVSA 144
Query: 120 LHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPE 178
L Y H ++HRD+K N+L++ + ++++ DFG A+ S + N + T Y PE
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK 238
LL + + D+W++GCI +L+ G P NE KI +L E +P
Sbjct: 205 LLTEKSA-CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP---- 259
Query: 239 MPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKD 286
A +L+EK+L+LD ++R+ ++
Sbjct: 260 --------------------------KARDLVEKLLVLDATKRLGCEE 281
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 114/260 (43%), Gaps = 45/260 (17%)
Query: 5 ISQVFMAREIKTGEIVALKKIRM-DNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
S+V+ A + G VALKK+++ D I+EI +LK+L H NVIK +
Sbjct: 45 FSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKY----YAS 100
Query: 64 GPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADR-PGLRFTVPQ--IKCYMKQLLTG 119
E +E +V E D DL+ + + +P+ + Y QL +
Sbjct: 101 FIEDNELN------------IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA 148
Query: 120 LHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPEL 179
L + H +V+HRDIK +N+ I G +KL D GL R FS + V T +Y PE
Sbjct: 149 LEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS-SKTTAAHSLVGTPYYMSPER 207
Query: 180 LLGATKYGPAVDMWSVGCIFAELLNGK----------------------PILPGKNEAEQ 217
+ Y D+WS+GC+ E+ + P LP + +E+
Sbjct: 208 I-HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEE 266
Query: 218 LSKIFELCGSPDETIWPGVS 237
L ++ +C +PD P V+
Sbjct: 267 LRQLVNMCINPDPEKRPDVT 286
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 57/288 (19%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNE-KEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
S V +ARE+ T A+K + + KE RE ++ +L H +KL
Sbjct: 50 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFCF--- 106
Query: 64 GPERDEQGRPDGNKYRGSTYM----VFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTG 119
+ D Y G +Y + +Y+ G D RF Y ++++
Sbjct: 107 --------QDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF-------YTAEIVSA 149
Query: 120 LHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPE 178
L Y H ++HRD+K N+L++ + ++++ DFG A+ S + N + T Y PE
Sbjct: 150 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 209
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK 238
LL + + D+W++GCI +L+ G P NE KI +L E +P
Sbjct: 210 LLTEKSA-CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP---- 264
Query: 239 MPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKD 286
A +L+EK+L+LD ++R+ ++
Sbjct: 265 --------------------------KARDLVEKLLVLDATKRLGCEE 286
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 57/288 (19%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNE-KEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
S V +ARE+ T A+K + + KE RE ++ +L H +KL
Sbjct: 23 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF--- 79
Query: 64 GPERDEQGRPDGNKYRGSTYM----VFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTG 119
+ D Y G +Y + +Y+ G D RF Y ++++
Sbjct: 80 --------QDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF-------YTAEIVSA 122
Query: 120 LHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPE 178
L Y H ++HRD+K N+L++ + ++++ DFG A+ S + N + T Y PE
Sbjct: 123 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 182
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK 238
LL + + D+W++GCI +L+ G P NE KI +L E +P
Sbjct: 183 LLTEKSA-CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP---- 237
Query: 239 MPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKD 286
A +L+EK+L+LD ++R+ ++
Sbjct: 238 --------------------------KARDLVEKLLVLDATKRLGCEE 259
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 57/288 (19%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNE-KEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
S V +ARE+ T A+K + + KE RE ++ +L H +KL
Sbjct: 45 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF--- 101
Query: 64 GPERDEQGRPDGNKYRGSTYM----VFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTG 119
+ D Y G +Y + +Y+ G D RF Y ++++
Sbjct: 102 --------QDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF-------YTAEIVSA 144
Query: 120 LHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPE 178
L Y H ++HRD+K N+L++ + ++++ DFG A+ S + N + T Y PE
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK 238
LL + + D+W++GCI +L+ G P NE KI +L E +P
Sbjct: 205 LLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP---- 259
Query: 239 MPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKD 286
A +L+EK+L+LD ++R+ ++
Sbjct: 260 --------------------------KARDLVEKLLVLDATKRLGCEE 281
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 57/288 (19%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNE-KEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
S V +ARE+ T A+K + + KE RE ++ +L H +KL
Sbjct: 43 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF--- 99
Query: 64 GPERDEQGRPDGNKYRGSTYM----VFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTG 119
+ D Y G +Y + +Y+ G D RF Y ++++
Sbjct: 100 --------QDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF-------YTAEIVSA 142
Query: 120 LHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPE 178
L Y H ++HRD+K N+L++ + ++++ DFG A+ S + N + T Y PE
Sbjct: 143 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK 238
LL + + D+W++GCI +L+ G P NE KI +L E +P
Sbjct: 203 LLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP---- 257
Query: 239 MPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKD 286
A +L+EK+L+LD ++R+ ++
Sbjct: 258 --------------------------KARDLVEKLLVLDATKRLGCEE 279
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 57/288 (19%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNE-KEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
S V +ARE+ T A+K + + KE RE ++ +L H +KL
Sbjct: 43 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF--- 99
Query: 64 GPERDEQGRPDGNKYRGSTYM----VFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTG 119
+ D Y G +Y + +Y+ G D RF Y ++++
Sbjct: 100 --------QDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF-------YTAEIVSA 142
Query: 120 LHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPE 178
L Y H ++HRD+K N+L++ + ++++ DFG A+ S + N + T Y PE
Sbjct: 143 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK 238
LL + + D+W++GCI +L+ G P NE KI +L E +P
Sbjct: 203 LLTEKSA-CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP---- 257
Query: 239 MPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKD 286
A +L+EK+L+LD ++R+ ++
Sbjct: 258 --------------------------KARDLVEKLLVLDATKRLGCEE 279
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 57/288 (19%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNE-KEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
S V +ARE+ T A+K + + KE RE ++ +L H +KL
Sbjct: 43 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF--- 99
Query: 64 GPERDEQGRPDGNKYRGSTYM----VFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTG 119
+ D Y G +Y + +Y+ G D RF Y ++++
Sbjct: 100 --------QDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF-------YTAEIVSA 142
Query: 120 LHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPE 178
L Y H ++HRD+K N+L++ + ++++ DFG A+ S + N + T Y PE
Sbjct: 143 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPE 202
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK 238
LL + + D+W++GCI +L+ G P NE KI +L E +P
Sbjct: 203 LLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP---- 257
Query: 239 MPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKD 286
A +L+EK+L+LD ++R+ ++
Sbjct: 258 --------------------------KARDLVEKLLVLDATKRLGCEE 279
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 57/288 (19%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNE-KEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
S V +ARE+ T A+K + + KE RE ++ +L H +KL
Sbjct: 22 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF--- 78
Query: 64 GPERDEQGRPDGNKYRGSTYM----VFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTG 119
+ D Y G +Y + +Y+ G D RF Y ++++
Sbjct: 79 --------QDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF-------YTAEIVSA 121
Query: 120 LHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPE 178
L Y H ++HRD+K N+L++ + ++++ DFG A+ S + N + T Y PE
Sbjct: 122 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 181
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK 238
LL + + D+W++GCI +L+ G P NE KI +L E +P
Sbjct: 182 LLTEKSA-CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP---- 236
Query: 239 MPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKD 286
A +L+EK+L+LD ++R+ ++
Sbjct: 237 --------------------------KARDLVEKLLVLDATKRLGCEE 258
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 29/204 (14%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V+ A +TG+IVA+K++ ++++ + I+EI I+++ +V+K
Sbjct: 45 VYKAIHKETGQIVAIKQVPVESDLQEI----IKEISIMQQCDSPHVVKYY---------- 90
Query: 68 DEQGRPDGNKYRGS-TYMVFEYMDHDLTGLADRPGLR---FTVPQIKCYMKQLLTGLHYC 123
G+ ++ + ++V EY ++D LR T +I ++ L GL Y
Sbjct: 91 -------GSYFKNTDLWIVMEYCGAG--SVSDIIRLRNKTLTEDEIATILQSTLKGLEYL 141
Query: 124 HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
H + +HRDIK N+L++ EG+ KLADFG+A + D + T ++ PE ++
Sbjct: 142 HFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLT-DXMAKRNXVIGTPFWMAPE-VIQE 199
Query: 184 TKYGPAVDMWSVGCIFAELLNGKP 207
Y D+WS+G E+ GKP
Sbjct: 200 IGYNCVADIWSLGITAIEMAEGKP 223
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 57/288 (19%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNE-KEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
S V +ARE+ T A+K + + KE RE ++ +L H +KL
Sbjct: 45 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF--- 101
Query: 64 GPERDEQGRPDGNKYRGSTYM----VFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTG 119
+ D Y G +Y + +Y+ G D RF Y ++++
Sbjct: 102 --------QDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF-------YTAEIVSA 144
Query: 120 LHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPE 178
L Y H ++HRD+K N+L++ + ++++ DFG A+ S + N + T Y PE
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK 238
LL + + D+W++GCI +L+ G P NE KI +L E +P
Sbjct: 205 LLTEKSA-CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP---- 259
Query: 239 MPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKD 286
A +L+EK+L+LD ++R+ ++
Sbjct: 260 --------------------------KARDLVEKLLVLDATKRLGCEE 281
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 30/211 (14%)
Query: 14 IKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRP 73
+ ++ A+ I + K+ F +EIK++ K QHEN+++L
Sbjct: 57 VAVKKLAAMVDITTEELKQQFD----QEIKVMAKCQHENLVELLGF------------SS 100
Query: 74 DGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVP----QIKCYMKQ-LLTGLHYCHVNQV 128
DG+ +V+ YM + L DR P ++C + Q G+++ H N
Sbjct: 101 DGDDL----CLVYVYMPNG--SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 154
Query: 129 LHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPELLLGATKYG 187
+HRDIK +N+L+D K++DFGLAR+ + R++ T Y PE L G +
Sbjct: 155 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRG--EIT 212
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQL 218
P D++S G + E++ G P + E + L
Sbjct: 213 PKSDIYSFGVVLLEIITGLPAVDEHREPQLL 243
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 29/196 (14%)
Query: 16 TGEIVALKKIRMD---NEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGR 72
TGE+VA+K ++ D + G+ +EI IL+ L HE++IK K G +
Sbjct: 42 TGEMVAVKALKADCGPQHRSGWK----QEIDILRTLYHEHIIKYKGCCEDQGEK------ 91
Query: 73 PDGNKYRGSTYMVFEYMDHDLTGLADR-PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHR 131
S +V EY+ L L D P + Q+ + +Q+ G+ Y H +HR
Sbjct: 92 --------SLQLVMEYVP--LGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHR 141
Query: 132 DIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR---VITLWYRPPELLLGATKYGP 188
++ N+L+DN+ +K+ DFGLA++ H WY P L K+
Sbjct: 142 NLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE--CLKEYKFYY 199
Query: 189 AVDMWSVGCIFAELLN 204
A D+WS G ELL
Sbjct: 200 ASDVWSFGVTLYELLT 215
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 73/126 (57%), Gaps = 5/126 (3%)
Query: 83 YMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLI 140
+++ +Y++ T L+ R RFT +++ Y+ +++ L + H +++RDIK N+L+
Sbjct: 135 HLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL 192
Query: 141 DNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA-TKYGPAVDMWSVGCIF 199
D+ G++ L DFGL++ F D + T+ Y P+++ G + + AVD WS+G +
Sbjct: 193 DSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLM 252
Query: 200 AELLNG 205
ELL G
Sbjct: 253 YELLTG 258
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 126/289 (43%), Gaps = 53/289 (18%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPG 64
S+V +A + +T ++VA+K I + EG + EI +L K++H N++ L +I S G
Sbjct: 31 FSEVILAEDKRTQKLVAIKCIAKEA-LEGKEGSMENEIAVLHKIKHPNIVALDDIYESGG 89
Query: 65 PERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR--FTVPQIKCYMKQLLTGLHY 122
Y++ + + L DR + +T + Q+L + Y
Sbjct: 90 ----------------HLYLIMQLVSG--GELFDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 123 CHVNQVLHRDIKGSNLL---IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPEL 179
H ++HRD+K NLL +D + + ++DFGL++ D + L+ T Y PE+
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEV 189
Query: 180 LLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM 239
L Y AVD WS+G I LL G P +N+A+ +I + D W +S
Sbjct: 190 L-AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS 248
Query: 240 PAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDAL 288
+ F RH L+EK DP +R + + AL
Sbjct: 249 A-------------------KDFIRH---LMEK----DPEKRFTCEQAL 271
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 57/288 (19%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNE-KEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
S V +ARE+ T A+K + + KE RE ++ +L H +KL
Sbjct: 21 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF--- 77
Query: 64 GPERDEQGRPDGNKYRGSTYM----VFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTG 119
+ D Y G +Y + +Y+ G D RF Y ++++
Sbjct: 78 --------QDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF-------YTAEIVSA 120
Query: 120 LHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPE 178
L Y H ++HRD+K N+L++ + ++++ DFG A+ S + N + T Y PE
Sbjct: 121 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 180
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK 238
LL + + D+W++GCI +L+ G P NE KI +L E +P
Sbjct: 181 LLTEKSA-CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP---- 235
Query: 239 MPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKD 286
A +L+EK+L+LD ++R+ ++
Sbjct: 236 --------------------------KARDLVEKLLVLDATKRLGCEE 257
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 119/281 (42%), Gaps = 32/281 (11%)
Query: 6 SQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGP 65
S + I G + R E+ + + +++ ILKK + ++++ + ++
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 66 ERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHV 125
G + Y V +Y++ + F P+ + Y ++ + L Y H
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHS 157
Query: 126 NQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATK 185
+++RD+K N+L+D++G++ L DFGL + + +HN+T + T Y PE +L
Sbjct: 158 LNIVYRDLKPENILLDSQGHIVLTDFGLCKE-NIEHNSTTSTFCGTPEYLAPE-VLHKQP 215
Query: 186 YGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHF 245
Y VD W +G + E+L G P +N AE I
Sbjct: 216 YDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN---------------------- 253
Query: 246 KPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKD 286
KP + +K + RH LLE +L D ++R+ AKD
Sbjct: 254 KPLQ-LKPNITNSARH-------LLEGLLQKDRTKRLGAKD 286
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 126/289 (43%), Gaps = 53/289 (18%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPG 64
S+V +A + +T ++VA+K I + EG + EI +L K++H N++ L +I S G
Sbjct: 31 FSEVILAEDKRTQKLVAIKCIAKEA-LEGKEGSMENEIAVLHKIKHPNIVALDDIYESGG 89
Query: 65 PERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR--FTVPQIKCYMKQLLTGLHY 122
Y++ + + L DR + +T + Q+L + Y
Sbjct: 90 ----------------HLYLIMQLVSG--GELFDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 123 CHVNQVLHRDIKGSNLL---IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPEL 179
H ++HRD+K NLL +D + + ++DFGL++ D + L+ T Y PE+
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEV 189
Query: 180 LLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM 239
L Y AVD WS+G I LL G P +N+A+ +I + D W +S
Sbjct: 190 L-AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS 248
Query: 240 PAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDAL 288
+ F RH L+EK DP +R + + AL
Sbjct: 249 A-------------------KDFIRH---LMEK----DPEKRFTCEQAL 271
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 57/288 (19%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNE-KEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
S V +ARE+ T A+K + + KE RE ++ +L H +KL
Sbjct: 20 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF--- 76
Query: 64 GPERDEQGRPDGNKYRGSTYM----VFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTG 119
+ D Y G +Y + +Y+ G D RF Y ++++
Sbjct: 77 --------QDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF-------YTAEIVSA 119
Query: 120 LHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPE 178
L Y H ++HRD+K N+L++ + ++++ DFG A+ S + N + T Y PE
Sbjct: 120 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 179
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK 238
LL + + D+W++GCI +L+ G P NE KI +L E +P
Sbjct: 180 LLTEKSA-CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP---- 234
Query: 239 MPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKD 286
A +L+EK+L+LD ++R+ ++
Sbjct: 235 --------------------------KARDLVEKLLVLDATKRLGCEE 256
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 126/289 (43%), Gaps = 53/289 (18%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPG 64
S+V +A + +T ++VA+K I + EG + EI +L K++H N++ L +I S G
Sbjct: 31 FSEVILAEDKRTQKLVAIKCIAKEA-LEGKEGSMENEIAVLHKIKHPNIVALDDIYESGG 89
Query: 65 PERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR--FTVPQIKCYMKQLLTGLHY 122
Y++ + + L DR + +T + Q+L + Y
Sbjct: 90 ----------------HLYLIMQLVSG--GELFDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 123 CHVNQVLHRDIKGSNLL---IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPEL 179
H ++HRD+K NLL +D + + ++DFGL++ D + L+ T Y PE+
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEV 189
Query: 180 LLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM 239
L Y AVD WS+G I LL G P +N+A+ +I + D W +S
Sbjct: 190 L-AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS 248
Query: 240 PAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDAL 288
+ F RH L+EK DP +R + + AL
Sbjct: 249 A-------------------KDFIRH---LMEK----DPEKRFTCEQAL 271
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 30/211 (14%)
Query: 14 IKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRP 73
+ ++ A+ I + K+ F +EIK++ K QHEN+++L
Sbjct: 51 VAVKKLAAMVDITTEELKQQFD----QEIKVMAKCQHENLVELLGF------------SS 94
Query: 74 DGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVP----QIKCYMKQ-LLTGLHYCHVNQV 128
DG+ +V+ YM + L DR P ++C + Q G+++ H N
Sbjct: 95 DGD----DLCLVYVYMPNG--SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 148
Query: 129 LHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPELLLGATKYG 187
+HRDIK +N+L+D K++DFGLAR+ + R++ T Y PE L G +
Sbjct: 149 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRG--EIT 206
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQL 218
P D++S G + E++ G P + E + L
Sbjct: 207 PKSDIYSFGVVLLEIITGLPAVDEHREPQLL 237
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
G Y++ +++ + FT +K Y+ +L L + H +++RD+K N+L
Sbjct: 99 GKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENIL 158
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIF 199
+D EG++KL DFGL++ S DH + T+ Y PE ++ + + D WS G +
Sbjct: 159 LDEEGHIKLTDFGLSKE-SIDHEKKAYSFCGTVEYMAPE-VVNRRGHTQSADWWSFGVLM 216
Query: 200 AELLNGKPILPGKNEAEQLSKIFE 223
E+L G GK+ E ++ I +
Sbjct: 217 FEMLTGTLPFQGKDRKETMTMILK 240
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 121/288 (42%), Gaps = 57/288 (19%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNE-KEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
S V +ARE+ T A+K + + KE RE ++ +L H +KL
Sbjct: 48 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF--- 104
Query: 64 GPERDEQGRPDGNKYRGSTYM----VFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTG 119
+ D Y G +Y + +Y+ G D RF Y ++++
Sbjct: 105 --------QDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF-------YTAEIVSA 147
Query: 120 LHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPE 178
L Y H ++HRD+K N+L++ + ++++ DFG A+ S + N + T Y PE
Sbjct: 148 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 207
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK 238
LL + + D+W++GCI +L+ G P NE KI +L E +P
Sbjct: 208 LLTEKSA-CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-----EYDFPAA-- 259
Query: 239 MPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKD 286
F A +L+EK+L+LD ++R+ ++
Sbjct: 260 -----------------------FFPKARDLVEKLLVLDATKRLGCEE 284
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 29/196 (14%)
Query: 16 TGEIVALKKIRMD---NEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGR 72
TGE+VA+K ++ D + G+ +EI IL+ L HE++IK K G +
Sbjct: 42 TGEMVAVKALKADCGPQHRSGWK----QEIDILRTLYHEHIIKYKGCCEDQGEK------ 91
Query: 73 PDGNKYRGSTYMVFEYMDHDLTGLADR-PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHR 131
S +V EY+ L L D P + Q+ + +Q+ G+ Y H +HR
Sbjct: 92 --------SLQLVMEYVP--LGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQHYIHR 141
Query: 132 DIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR---VITLWYRPPELLLGATKYGP 188
++ N+L+DN+ +K+ DFGLA++ H WY P L K+
Sbjct: 142 NLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE--CLKEYKFYY 199
Query: 189 AVDMWSVGCIFAELLN 204
A D+WS G ELL
Sbjct: 200 ASDVWSFGVTLYELLT 215
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 57/288 (19%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNE-KEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
S V +ARE+ T A+K + + KE RE ++ +L H +KL
Sbjct: 42 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF--- 98
Query: 64 GPERDEQGRPDGNKYRGSTYM----VFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTG 119
+ D Y G +Y + +Y+ G D RF Y ++++
Sbjct: 99 --------QDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF-------YTAEIVSA 141
Query: 120 LHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPE 178
L Y H ++HRD+K N+L++ + ++++ DFG A+ S + N + T Y PE
Sbjct: 142 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 201
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK 238
LL + + D+W++GCI +L+ G P NE KI +L E +P
Sbjct: 202 LLTEKSA-CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP---- 256
Query: 239 MPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKD 286
A +L+EK+L+LD ++R+ ++
Sbjct: 257 --------------------------KARDLVEKLLVLDATKRLGCEE 278
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 38/213 (17%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V+ A+ +T + A K I +E+E EI IL H N++KL
Sbjct: 52 KVYKAQNKETSVLAAAKVIDTKSEEELEDYMV--EIDILASCDHPNIVKL---------- 99
Query: 67 RDEQGRPDGNKYRGSTYMVFEY-----MDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
D Y + +++ E+ +D + L +RP T QI+ KQ L L+
Sbjct: 100 ------LDAFYYENNLWILIEFCAGGAVDAVMLEL-ERP---LTESQIQVVCKQTLDALN 149
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR---VITLWYRPPE 178
Y H N+++HRD+K N+L +G++KLADFG+ S + T+ R + T ++ PE
Sbjct: 150 YLHDNKIIHRDLKAGNILFTLDGDIKLADFGV----SAKNTRTIQRRDSFIGTPYWMAPE 205
Query: 179 LLLGATK----YGPAVDMWSVGCIFAELLNGKP 207
+++ T Y D+WS+G E+ +P
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 57/288 (19%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNE-KEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
S V +ARE+ T A+K + + KE RE ++ +L H +KL
Sbjct: 42 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF--- 98
Query: 64 GPERDEQGRPDGNKYRGSTYM----VFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTG 119
+ D Y G +Y + +Y+ G D RF Y ++++
Sbjct: 99 --------QDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF-------YTAEIVSA 141
Query: 120 LHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPE 178
L Y H ++HRD+K N+L++ + ++++ DFG A+ S + N + T Y PE
Sbjct: 142 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 201
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK 238
LL + + D+W++GCI +L+ G P NE KI +L E +P
Sbjct: 202 LLTEKSA-CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP---- 256
Query: 239 MPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKD 286
A +L+EK+L+LD ++R+ ++
Sbjct: 257 --------------------------KARDLVEKLLVLDATKRLGCEE 278
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 76/145 (52%), Gaps = 4/145 (2%)
Query: 80 GSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNL 138
G Y++ +++ DL + + FT +K Y+ +L L + H +++RD+K N+
Sbjct: 99 GKLYLILDFLRGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENI 157
Query: 139 LIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCI 198
L+D EG++KL DFGL++ S DH + T+ Y PE ++ + + D WS G +
Sbjct: 158 LLDEEGHIKLTDFGLSKE-SIDHEKKAYSFCGTVEYMAPE-VVNRRGHTQSADWWSFGVL 215
Query: 199 FAELLNGKPILPGKNEAEQLSKIFE 223
E+L G GK+ E ++ I +
Sbjct: 216 MFEMLTGTLPFQGKDRKETMTMILK 240
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 76/145 (52%), Gaps = 4/145 (2%)
Query: 80 GSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNL 138
G Y++ +++ DL + + FT +K Y+ +L L + H +++RD+K N+
Sbjct: 100 GKLYLILDFLRGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENI 158
Query: 139 LIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCI 198
L+D EG++KL DFGL++ S DH + T+ Y PE ++ + + D WS G +
Sbjct: 159 LLDEEGHIKLTDFGLSKE-SIDHEKKAYSFCGTVEYMAPE-VVNRRGHTQSADWWSFGVL 216
Query: 199 FAELLNGKPILPGKNEAEQLSKIFE 223
E+L G GK+ E ++ I +
Sbjct: 217 MFEMLTGTLPFQGKDRKETMTMILK 241
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 94/193 (48%), Gaps = 21/193 (10%)
Query: 16 TGEIVALKKIRMDNEKEGFPITAIR-EIKILKKLQHENVIKLKEIVTSPGPERDEQGRPD 74
TGE VA+K ++ E G I ++ EI+IL+ L HEN++K K I T G
Sbjct: 49 TGEQVAVKSLK--PESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG---------- 96
Query: 75 GNKYRGSTYMVFEYM-DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDI 133
GN + ++ E++ L + + + Q Y Q+ G+ Y Q +HRD+
Sbjct: 97 GNGIK----LIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDL 152
Query: 134 KGSNLLIDNEGNLKLADFGLARSFSYDHNNTLT--NRVITLWYRPPELLLGATKYGPAVD 191
N+L+++E +K+ DFGL ++ D +R +++ PE L+ +K+ A D
Sbjct: 153 AARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM-QSKFYIASD 211
Query: 192 MWSVGCIFAELLN 204
+WS G ELL
Sbjct: 212 VWSFGVTLHELLT 224
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 57/288 (19%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNE-KEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
S V +ARE+ T A+K + + KE RE ++ +L H +KL
Sbjct: 27 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF--- 83
Query: 64 GPERDEQGRPDGNKYRGSTYM----VFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTG 119
+ D Y G +Y + +Y+ G D RF Y ++++
Sbjct: 84 --------QDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF-------YTAEIVSA 126
Query: 120 LHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPE 178
L Y H ++HRD+K N+L++ + ++++ DFG A+ S + N + T Y PE
Sbjct: 127 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 186
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK 238
LL + + D+W++GCI +L+ G P NE KI +L E +P
Sbjct: 187 LLTEKSA-CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP---- 241
Query: 239 MPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKD 286
A +L+EK+L+LD ++R+ ++
Sbjct: 242 --------------------------KARDLVEKLLVLDATKRLGCEE 263
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 31/210 (14%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V+ A+ +T + A K I +E+E EI IL H N++KL
Sbjct: 25 KVYKAQNKETSVLAAAKVIDTKSEEELEDYMV--EIDILASCDHPNIVKLL--------- 73
Query: 67 RDEQGRPDGNKYRGSTYMVFEY-----MDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
D Y + +++ E+ +D + L +RP T QI+ KQ L L+
Sbjct: 74 -------DAFYYENNLWILIEFCAGGAVDAVMLEL-ERP---LTESQIQVVCKQTLDALN 122
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLL 181
Y H N+++HRD+K N+L +G++KLADFG++ + + + T ++ PE+++
Sbjct: 123 YLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVM 182
Query: 182 GATK----YGPAVDMWSVGCIFAELLNGKP 207
T Y D+WS+G E+ +P
Sbjct: 183 CETSKDRPYDYKADVWSLGITLIEMAEIEP 212
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 4/142 (2%)
Query: 83 YMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID 141
Y V EY++ DL + G RF P Y ++ GL + +++RD+K N+++D
Sbjct: 418 YFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD 476
Query: 142 NEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAE 201
+EG++K+ADFG+ + +D T T Y PE ++ YG +VD W+ G + E
Sbjct: 477 SEGHIKIADFGMCKENIWD-GVTTKXFCGTPDYIAPE-IIAYQPYGKSVDWWAFGVLLYE 534
Query: 202 LLNGKPILPGKNEAEQLSKIFE 223
+L G+ G++E E I E
Sbjct: 535 MLAGQAPFEGEDEDELFQSIME 556
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 84/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYM-DHDLTG 95
+K L + V+KLK+I + +R +Q K + YMV EY ++
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFS 131
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +K+ADFG A+
Sbjct: 132 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK 190
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 191 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 30/219 (13%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNEKE-GFPITAIREIKILKKLQHENVIKL---KEIV 60
+S+V +AR+++ VA+K +R D ++ F + RE + L H ++ + E
Sbjct: 25 MSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAE 84
Query: 61 TSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLT-- 118
T GP Y+V EY+D G+ R + P +++
Sbjct: 85 TPAGP---------------LPYIVMEYVD----GVTLRDIVHTEGPMTPKRAIEVIADA 125
Query: 119 --GLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN-TLTNRVI-TLWY 174
L++ H N ++HRD+K +N++I +K+ DFG+AR+ + N+ T T VI T Y
Sbjct: 126 CQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 175 RPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKN 213
PE G + + D++S+GC+ E+L G+P G +
Sbjct: 186 LSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 94/193 (48%), Gaps = 21/193 (10%)
Query: 16 TGEIVALKKIRMDNEKEGFPITAIR-EIKILKKLQHENVIKLKEIVTSPGPERDEQGRPD 74
TGE VA+K ++ E G I ++ EI+IL+ L HEN++K K I T G
Sbjct: 37 TGEQVAVKSLK--PESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG---------- 84
Query: 75 GNKYRGSTYMVFEYM-DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDI 133
GN + ++ E++ L + + + Q Y Q+ G+ Y Q +HRD+
Sbjct: 85 GNGIK----LIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDL 140
Query: 134 KGSNLLIDNEGNLKLADFGLARSFSYDHNNTLT--NRVITLWYRPPELLLGATKYGPAVD 191
N+L+++E +K+ DFGL ++ D +R +++ PE L+ +K+ A D
Sbjct: 141 AARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM-QSKFYIASD 199
Query: 192 MWSVGCIFAELLN 204
+WS G ELL
Sbjct: 200 VWSFGVTLHELLT 212
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 30/219 (13%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNEKE-GFPITAIREIKILKKLQHENVIKL---KEIV 60
+S+V +AR+++ VA+K +R D ++ F + RE + L H ++ + E
Sbjct: 25 MSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAE 84
Query: 61 TSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLT-- 118
T GP Y+V EY+D G+ R + P +++
Sbjct: 85 TPAGP---------------LPYIVMEYVD----GVTLRDIVHTEGPMTPKRAIEVIADA 125
Query: 119 --GLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN-TLTNRVI-TLWY 174
L++ H N ++HRD+K +N++I +K+ DFG+AR+ + N+ T T VI T Y
Sbjct: 126 CQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 175 RPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKN 213
PE G + + D++S+GC+ E+L G+P G +
Sbjct: 186 LSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 106/220 (48%), Gaps = 32/220 (14%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNEKE-GFPITAIREIKILKKLQHENVIKL---KEIV 60
+S+V +AR+++ VA+K +R D ++ F + RE + L H ++ + E
Sbjct: 25 MSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAE 84
Query: 61 TSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLT-- 118
T GP Y+V EY+D G+ R + P +++
Sbjct: 85 TPAGP---------------LPYIVMEYVD----GVTLRDIVHTEGPMTPKRAIEVIADA 125
Query: 119 --GLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTL--TNRVI-TLW 173
L++ H N ++HRD+K +N+LI +K+ DFG+AR+ + D N++ T VI T
Sbjct: 126 CQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIA-DSGNSVXQTAAVIGTAQ 184
Query: 174 YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKN 213
Y PE G + + D++S+GC+ E+L G+P G +
Sbjct: 185 YLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 119/288 (41%), Gaps = 57/288 (19%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNE-KEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
S +ARE+ T A+K + + KE RE ++ +L H +KL
Sbjct: 43 FSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF--- 99
Query: 64 GPERDEQGRPDGNKYRGSTYM----VFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTG 119
+ D Y G +Y + +Y+ G D RF Y ++++
Sbjct: 100 --------QDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF-------YTAEIVSA 142
Query: 120 LHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPE 178
L Y H ++HRD+K N+L++ + ++++ DFG A+ S + N + T Y PE
Sbjct: 143 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSK 238
LL + + D+W++GCI +L+ G P NE KI +L E +P
Sbjct: 203 LLTEKSA-CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP---- 257
Query: 239 MPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKD 286
A +L+EK+L+LD ++R+ ++
Sbjct: 258 --------------------------KARDLVEKLLVLDATKRLGCEE 279
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 30/219 (13%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNEKE-GFPITAIREIKILKKLQHENVIKL---KEIV 60
+S+V +AR+++ VA+K +R D ++ F + RE + L H ++ + E
Sbjct: 25 MSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAE 84
Query: 61 TSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLT-- 118
T GP Y+V EY+D G+ R + P +++
Sbjct: 85 TPAGP---------------LPYIVMEYVD----GVTLRDIVHTEGPMTPKRAIEVIADA 125
Query: 119 --GLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN-TLTNRVI-TLWY 174
L++ H N ++HRD+K +N++I +K+ DFG+AR+ + N+ T T VI T Y
Sbjct: 126 CQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 175 RPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKN 213
PE G + + D++S+GC+ E+L G+P G +
Sbjct: 186 LSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 30/219 (13%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNEKE-GFPITAIREIKILKKLQHENVIKL---KEIV 60
+S+V +AR+++ VA+K +R D ++ F + RE + L H ++ + E
Sbjct: 25 MSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAE 84
Query: 61 TSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLT-- 118
T GP Y+V EY+D G+ R + P +++
Sbjct: 85 TPAGP---------------LPYIVMEYVD----GVTLRDIVHTEGPMTPKRAIEVIADA 125
Query: 119 --GLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN-TLTNRVI-TLWY 174
L++ H N ++HRD+K +N++I +K+ DFG+AR+ + N+ T T VI T Y
Sbjct: 126 CQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 175 RPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKN 213
PE G + + D++S+GC+ E+L G+P G +
Sbjct: 186 LSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 135/317 (42%), Gaps = 57/317 (17%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHEN-----------V 53
S V++A+++ VA+K +R D + + A EIK+L+++ + +
Sbjct: 32 FSTVWLAKDMVNNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHI 88
Query: 54 IKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCY 112
+KL + GP MVFE + +L L + R + +K
Sbjct: 89 LKLLDHFNHKGPNG------------VHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQI 136
Query: 113 MKQLLTGLHYCHVN-QVLHRDIKGSNLLID------NEGNLKLADFGLARSFSYDHNNTL 165
KQLL GL Y H ++H DIK N+L++ N +K+AD G A + + N++
Sbjct: 137 SKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSI 196
Query: 166 TNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPIL------PGKNEAEQLS 219
R YR PE+LLGA +G D+WS C+ EL+ G + + + ++
Sbjct: 197 QTRE----YRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA 251
Query: 220 KIFELCGS-PDETIWPGVSKMPAYNHFKPSRTMKRR--------VREVFRHFDRHALEL- 269
+I EL G P + G +N R + + + E ++ A E+
Sbjct: 252 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEIS 311
Query: 270 --LEKMLMLDPSQRISA 284
L ML LDP +R A
Sbjct: 312 DFLSPMLQLDPRKRADA 328
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 135/317 (42%), Gaps = 57/317 (17%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHEN-----------V 53
S V++A+++ VA+K +R D + + A EIK+L+++ + +
Sbjct: 32 FSTVWLAKDMVNNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHI 88
Query: 54 IKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCY 112
+KL + GP MVFE + +L L + R + +K
Sbjct: 89 LKLLDHFNHKGPNG------------VHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQI 136
Query: 113 MKQLLTGLHYCHVN-QVLHRDIKGSNLLID------NEGNLKLADFGLARSFSYDHNNTL 165
KQLL GL Y H ++H DIK N+L++ N +K+AD G A + + N++
Sbjct: 137 SKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSI 196
Query: 166 TNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPIL------PGKNEAEQLS 219
R YR PE+LLGA +G D+WS C+ EL+ G + + + ++
Sbjct: 197 QTRE----YRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA 251
Query: 220 KIFELCGS-PDETIWPGVSKMPAYNHFKPSRTMKRR--------VREVFRHFDRHALEL- 269
+I EL G P + G +N R + + + E ++ A E+
Sbjct: 252 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEIS 311
Query: 270 --LEKMLMLDPSQRISA 284
L ML LDP +R A
Sbjct: 312 DFLSPMLQLDPRKRADA 328
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 123/284 (43%), Gaps = 56/284 (19%)
Query: 22 LKKIRMDNEKEGFPITAI-REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRG 80
+KK R+ + + G I RE+ IL++++H N+I L +I + +
Sbjct: 38 IKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN----------------KT 81
Query: 81 STYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNL 138
++ E + LA++ L T + ++KQ+L G+HY H ++ H D+K N+
Sbjct: 82 DVVLILELVSGGELFDFLAEKESL--TEDEATQFLKQILDGVHYLHSKRIAHFDLKPENI 139
Query: 139 LIDNEG----NLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWS 194
++ ++ +KL DFG+A + N N T + PE ++ G DMWS
Sbjct: 140 MLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFGTPEFVAPE-IVNYEPLGLEADMWS 196
Query: 195 VGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRR 254
+G I LL+G G+ + E L+ I + DE + S++
Sbjct: 197 IGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSEL--------------- 241
Query: 255 VREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPL 298
A + + ++L+ DP +R++ +L E+ W +
Sbjct: 242 -----------AKDFIRRLLVKDPKRRMTIAQSL--EHSWIKAI 272
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 115/287 (40%), Gaps = 54/287 (18%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
QV E TG +A K I+ K+ + EI ++ +L H N+I+L
Sbjct: 104 QVHKCEETATGLKLAAKIIKTRGMKDKEEVK--NEISVMNQLDHANLIQLY--------- 152
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADR---PGLRFTVPQIKCYMKQLLTGLHYC 123
D + + +V EY+D L DR T +MKQ+ G+ +
Sbjct: 153 -------DAFESKNDIVLVMEYVDG--GELFDRIIDESYNLTELDTILFMKQICEGIRHM 203
Query: 124 HVNQVLHRDIKGSNLLIDNEG--NLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLL 181
H +LH D+K N+L N +K+ DFGLAR Y L T + PE++
Sbjct: 204 HQMYILHLDLKPENILCVNRDAKQIKIIDFGLARR--YKPREKLKVNFGTPEFLAPEVVN 261
Query: 182 GATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPA 241
P DMWSVG I LL+G G N+AE L+ I ++
Sbjct: 262 YDFVSFPT-DMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLED----------- 309
Query: 242 YNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDAL 288
E F+ A E + K+L+ + S RISA +AL
Sbjct: 310 ---------------EEFQDISEEAKEFISKLLIKEKSWRISASEAL 341
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 4/142 (2%)
Query: 83 YMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID 141
Y V EY++ DL + G RF P Y ++ GL + +++RD+K N+++D
Sbjct: 97 YFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD 155
Query: 142 NEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAE 201
+EG++K+ADFG+ + +D T T Y PE ++ YG +VD W+ G + E
Sbjct: 156 SEGHIKIADFGMCKENIWD-GVTTKXFCGTPDYIAPE-IIAYQPYGKSVDWWAFGVLLYE 213
Query: 202 LLNGKPILPGKNEAEQLSKIFE 223
+L G+ G++E E I E
Sbjct: 214 MLAGQAPFEGEDEDELFQSIME 235
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 123/284 (43%), Gaps = 58/284 (20%)
Query: 22 LKKIRMDNEKEGFPITAI-REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRG 80
+KK R + + G I RE+ ILK++QH NVI L E+ + +
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN----------------KT 87
Query: 81 STYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNL 138
++ E + LA++ L T + ++KQ+L G++Y H Q+ H D+K N+
Sbjct: 88 DVILILELVAGGELFDFLAEKESL--TEEEATEFLKQILNGVYYLHSLQIAHFDLKPENI 145
Query: 139 LIDNEG----NLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWS 194
++ + +K+ DFGLA D N N T + PE ++ G DMWS
Sbjct: 146 MLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPE-IVNYEPLGLEADMWS 202
Query: 195 VGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNH-FKPSRTMKR 253
+G I LL+G G + E L+ + A N+ F+
Sbjct: 203 IGVITYILLSGASPFLGDTKQETLANV------------------SAVNYEFED------ 238
Query: 254 RVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDP 297
E F + A + + ++L+ DP +R++ +D+L ++ W P
Sbjct: 239 ---EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL--QHPWIKP 277
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 115/272 (42%), Gaps = 50/272 (18%)
Query: 22 LKKIRMDNEKEGFPITAI-REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRG 80
+KK R + + G I RE+ ILK++QH NVI L E+ E G G
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVY-----ENKTDVILIGELVAG 98
Query: 81 STYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLI 140
F LA++ L T + ++KQ+L G++Y H Q+ H D+K N+++
Sbjct: 99 GELFDF---------LAEKESL--TEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
Query: 141 DNEG----NLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG 196
+ +K+ DFGLA D N N T + PE ++ G DMWS+G
Sbjct: 148 LDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPE-IVNYEPLGLEADMWSIG 204
Query: 197 CIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVR 256
I LL+G G + E L+ + + ++ + S +
Sbjct: 205 VITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL----------------- 247
Query: 257 EVFRHFDRHALELLEKMLMLDPSQRISAKDAL 288
A + + ++L+ DP +R++ +D+L
Sbjct: 248 ---------AKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 99/230 (43%), Gaps = 24/230 (10%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
QV AR A+KKIR EK T + E+ +L L H+ V++ + E
Sbjct: 21 QVVKARNALDSRYYAIKKIRHTEEKLS---TILSEVXLLASLNHQYVVRY----YAAWLE 73
Query: 67 RDEQGRP-DGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCH 124
R +P K + + ++ EY ++ L L L + +Q+L L Y H
Sbjct: 74 RRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH 133
Query: 125 VNQVLHRDIKGSNLLIDNEGNLKLADFGLARS-------FSYDHNN------TLTNRVIT 171
++HR++K N+ ID N+K+ DFGLA++ D N LT+ + T
Sbjct: 134 SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGT 193
Query: 172 LWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
Y E+L G Y +D +S+G IF E + P G L K+
Sbjct: 194 AXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI--YPFSTGXERVNILKKL 241
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 54/274 (19%)
Query: 22 LKKIRMDNEKEGFPITAI-REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRG 80
+KK R + + G I RE+ ILK++QH NVI L E+ + +
Sbjct: 43 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN----------------KT 86
Query: 81 STYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNL 138
++ E + LA++ L T + ++KQ+L G++Y H Q+ H D+K N+
Sbjct: 87 DVILILELVAGGELFDFLAEKESL--TEEEATEFLKQILNGVYYLHSLQIAHFDLKPENI 144
Query: 139 LIDNEG----NLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWS 194
++ + +K+ DFGLA D N N T + PE ++ G DMWS
Sbjct: 145 MLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPE-IVNYEPLGLEADMWS 201
Query: 195 VGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRR 254
+G I LL+G G + E L+ + + ++ + S +
Sbjct: 202 IGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL--------------- 246
Query: 255 VREVFRHFDRHALELLEKMLMLDPSQRISAKDAL 288
A + + ++L+ DP +R++ +D+L
Sbjct: 247 -----------AKDFIRRLLVKDPKKRMTIQDSL 269
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 54/274 (19%)
Query: 22 LKKIRMDNEKEGFPITAI-REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRG 80
+KK R + + G I RE+ ILK++QH NVI L E+ + +
Sbjct: 43 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN----------------KT 86
Query: 81 STYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNL 138
++ E + LA++ L T + ++KQ+L G++Y H Q+ H D+K N+
Sbjct: 87 DVILILELVAGGELFDFLAEKESL--TEEEATEFLKQILNGVYYLHSLQIAHFDLKPENI 144
Query: 139 LIDNEG----NLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWS 194
++ + +K+ DFGLA D N N T + PE ++ G DMWS
Sbjct: 145 MLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPE-IVNYEPLGLEADMWS 201
Query: 195 VGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRR 254
+G I LL+G G + E L+ + + ++ + S +
Sbjct: 202 IGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL--------------- 246
Query: 255 VREVFRHFDRHALELLEKMLMLDPSQRISAKDAL 288
A + + ++L+ DP +R++ +D+L
Sbjct: 247 -----------AKDFIRRLLVKDPKKRMTIQDSL 269
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 22/206 (10%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMD-NEKEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
+S V++A + VA+K I + EKE RE+ +L H+N++ + ++
Sbjct: 24 MSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDV---- 79
Query: 64 GPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHY 122
DE+ Y+V EY++ L+ + G +V + Q+L G+ +
Sbjct: 80 ----DEED--------DCYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKH 126
Query: 123 CHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPELLL 181
H +++HRDIK N+LID+ LK+ DFG+A++ S + + T TN V+ T+ Y PE
Sbjct: 127 AHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS-ETSLTQTNHVLGTVQYFSPEQAK 185
Query: 182 GATKYGPAVDMWSVGCIFAELLNGKP 207
G D++S+G + E+L G+P
Sbjct: 186 GEAT-DECTDIYSIGIVLYEMLVGEP 210
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 84/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYM-DHDLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +K+ADFG A+
Sbjct: 131 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 190 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
QVF A+ G+ +K+++ +NEK A RE+K L KL H N++ G +
Sbjct: 26 QVFKAKHRIDGKTYVIKRVKYNNEK------AEREVKALAKLDHVNIVHYNG--CWDGFD 77
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTG-----LADRPGLRFTVPQIKCYMKQLLTGLH 121
D + N R T +F M+ G + R G + +Q+ G+
Sbjct: 78 YDPET-SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVD 136
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLL 181
Y H ++++RD+K SN+ + + +K+ DFGL S D + TL Y PE +
Sbjct: 137 YIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKG--TLRYMSPE-QI 193
Query: 182 GATKYGPAVDMWSVGCIFAELL 203
+ YG VD++++G I AELL
Sbjct: 194 SSQDYGKEVDLYALGLILAELL 215
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 54/274 (19%)
Query: 22 LKKIRMDNEKEGFPITAI-REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRG 80
+KK R + + G I RE+ ILK++QH NVI L E+ + +
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN----------------KT 87
Query: 81 STYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNL 138
++ E + LA++ L T + ++KQ+L G++Y H Q+ H D+K N+
Sbjct: 88 DVILILELVAGGELFDFLAEKESL--TEEEATEFLKQILNGVYYLHSLQIAHFDLKPENI 145
Query: 139 LIDNEG----NLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWS 194
++ + +K+ DFGLA D N N T + PE ++ G DMWS
Sbjct: 146 MLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPE-IVNYEPLGLEADMWS 202
Query: 195 VGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRR 254
+G I LL+G G + E L+ + + ++ + S +
Sbjct: 203 IGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL--------------- 247
Query: 255 VREVFRHFDRHALELLEKMLMLDPSQRISAKDAL 288
A + + ++L+ DP +R++ +D+L
Sbjct: 248 -----------AKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 88/194 (45%), Gaps = 29/194 (14%)
Query: 35 PITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHD-- 92
P + + E +I+KKL+H+ +++L +V+ Y+V EYM+
Sbjct: 48 PESFLEEAQIMKKLKHDKLVQLYAVVSEE-----------------PIYIVTEYMNKGSL 90
Query: 93 LTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFG 152
L L D G +P + Q+ G+ Y +HRD++ +N+L+ N K+ADFG
Sbjct: 91 LDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFG 150
Query: 153 LARSFSYDHNNTLTNR----VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKP 207
LAR +N T R W P L G ++ D+WS G + EL+ G+
Sbjct: 151 LARLI---EDNEXTARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELVTKGRV 205
Query: 208 ILPGKNEAEQLSKI 221
PG N E L ++
Sbjct: 206 PYPGMNNREVLEQV 219
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 54/274 (19%)
Query: 22 LKKIRMDNEKEGFPITAI-REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRG 80
+KK R + + G I RE+ ILK++QH NVI L E+ + +
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN----------------KT 87
Query: 81 STYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNL 138
++ E + LA++ L T + ++KQ+L G++Y H Q+ H D+K N+
Sbjct: 88 DVILILELVAGGELFDFLAEKESL--TEEEATEFLKQILNGVYYLHSLQIAHFDLKPENI 145
Query: 139 LIDNEG----NLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWS 194
++ + +K+ DFGLA D N N T + PE ++ G DMWS
Sbjct: 146 MLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPE-IVNYEPLGLEADMWS 202
Query: 195 VGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRR 254
+G I LL+G G + E L+ + + ++ + S +
Sbjct: 203 IGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL--------------- 247
Query: 255 VREVFRHFDRHALELLEKMLMLDPSQRISAKDAL 288
A + + ++L+ DP +R++ +D+L
Sbjct: 248 -----------AKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 123/284 (43%), Gaps = 58/284 (20%)
Query: 22 LKKIRMDNEKEGFPITAI-REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRG 80
+KK R + + G I RE+ ILK++QH NVI L E+ + +
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN----------------KT 87
Query: 81 STYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNL 138
++ E + LA++ L T + ++KQ+L G++Y H Q+ H D+K N+
Sbjct: 88 DVILILELVAGGELFDFLAEKESL--TEEEATEFLKQILNGVYYLHSLQIAHFDLKPENI 145
Query: 139 LIDNEG----NLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWS 194
++ + +K+ DFGLA D N N T + PE ++ G DMWS
Sbjct: 146 MLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPAFVAPE-IVNYEPLGLEADMWS 202
Query: 195 VGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNH-FKPSRTMKR 253
+G I LL+G G + E L+ + A N+ F+
Sbjct: 203 IGVITYILLSGASPFLGDTKQETLANV------------------SAVNYEFED------ 238
Query: 254 RVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDP 297
E F + A + + ++L+ DP +R++ +D+L ++ W P
Sbjct: 239 ---EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL--QHPWIKP 277
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 28/226 (12%)
Query: 22 LKKIRMDNEKEGFPITAI-REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRG 80
+KK R+ + + G I RE+ IL++++H N+I L +I + +
Sbjct: 45 IKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN----------------KT 88
Query: 81 STYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNL 138
++ E + LA++ L T + ++KQ+L G+HY H ++ H D+K N+
Sbjct: 89 DVVLILELVSGGELFDFLAEKESL--TEDEATQFLKQILDGVHYLHSKRIAHFDLKPENI 146
Query: 139 LIDNEG----NLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWS 194
++ ++ +KL DFG+A + N N T + PE ++ G DMWS
Sbjct: 147 MLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFGTPEFVAPE-IVNYEPLGLEADMWS 203
Query: 195 VGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMP 240
+G I LL+G G+ + E L+ I + DE + S++
Sbjct: 204 IGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELA 249
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 54/274 (19%)
Query: 22 LKKIRMDNEKEGFPITAI-REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRG 80
+KK R + + G I RE+ ILK++QH NVI L E+ + +
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN----------------KT 87
Query: 81 STYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNL 138
++ E + LA++ L T + ++KQ+L G++Y H Q+ H D+K N+
Sbjct: 88 DVILILELVAGGELFDFLAEKESL--TEEEATEFLKQILNGVYYLHSLQIAHFDLKPENI 145
Query: 139 LIDNEG----NLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWS 194
++ + +K+ DFGLA D N N T + PE ++ G DMWS
Sbjct: 146 MLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPE-IVNYEPLGLEADMWS 202
Query: 195 VGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRR 254
+G I LL+G G + E L+ + + ++ + S +
Sbjct: 203 IGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL--------------- 247
Query: 255 VREVFRHFDRHALELLEKMLMLDPSQRISAKDAL 288
A + + ++L+ DP +R++ +D+L
Sbjct: 248 -----------AKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 33/220 (15%)
Query: 17 GEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGN 76
G+I+ K++ + E + E+ +L++L+H N+++ + + +
Sbjct: 31 GKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRII--------------D 76
Query: 77 KYRGSTYMVFEYMDH-DLT-----GLADRPGL--RFTVPQIKCYMKQLLTGLHYCHV--- 125
+ + Y+V EY + DL G +R L F + M QL L CH
Sbjct: 77 RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLR----VMTQLTLALKECHRRSD 132
Query: 126 --NQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
+ VLHRD+K +N+ +D + N+KL DFGLAR ++D + T V T +Y PE +
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTF-VGTPYYMSPE-QMNR 190
Query: 184 TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFE 223
Y D+WS+GC+ EL P ++ E KI E
Sbjct: 191 MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE 230
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 54/274 (19%)
Query: 22 LKKIRMDNEKEGFPITAI-REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRG 80
+KK R + + G I RE+ ILK++QH NVI L E+ + +
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN----------------KT 87
Query: 81 STYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNL 138
++ E + LA++ L T + ++KQ+L G++Y H Q+ H D+K N+
Sbjct: 88 DVILILELVAGGELFDFLAEKESL--TEEEATEFLKQILNGVYYLHSLQIAHFDLKPENI 145
Query: 139 LIDNEG----NLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWS 194
++ + +K+ DFGLA D N N T + PE ++ G DMWS
Sbjct: 146 MLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPE-IVNYEPLGLEADMWS 202
Query: 195 VGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRR 254
+G I LL+G G + E L+ + + ++ + S +
Sbjct: 203 IGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL--------------- 247
Query: 255 VREVFRHFDRHALELLEKMLMLDPSQRISAKDAL 288
A + + ++L+ DP +R++ +D+L
Sbjct: 248 -----------AKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 123/284 (43%), Gaps = 58/284 (20%)
Query: 22 LKKIRMDNEKEGFPITAI-REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRG 80
+KK R + + G I RE+ ILK++QH NVI L E+ + +
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN----------------KT 87
Query: 81 STYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNL 138
++ E + LA++ L T + ++KQ+L G++Y H Q+ H D+K N+
Sbjct: 88 DVILILELVAGGELFDFLAEKESL--TEEEATEFLKQILNGVYYLHSLQIAHFDLKPENI 145
Query: 139 LIDNEG----NLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWS 194
++ + +K+ DFGLA D N N T + PE ++ G DMWS
Sbjct: 146 MLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPE-IVNYEPLGLEADMWS 202
Query: 195 VGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNH-FKPSRTMKR 253
+G I LL+G G + E L+ + A N+ F+
Sbjct: 203 IGVITYILLSGASPFLGDTKQETLANV------------------SAVNYEFED------ 238
Query: 254 RVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDP 297
E F + A + + ++L+ DP +R++ +D+L ++ W P
Sbjct: 239 ---EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL--QHPWIKP 277
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 30/219 (13%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNEKE-GFPITAIREIKILKKLQHENVIKL---KEIV 60
+S+V +AR+++ VA+K +R D ++ F + RE + L H ++ + E
Sbjct: 42 MSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAE 101
Query: 61 TSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLT-- 118
T GP Y+V EY+D G+ R + P +++
Sbjct: 102 TPAGP---------------LPYIVMEYVD----GVTLRDIVHTEGPMTPKRAIEVIADA 142
Query: 119 --GLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN-TLTNRVI-TLWY 174
L++ H N ++HRD+K +N++I +K+ DFG+AR+ + N+ T T VI T Y
Sbjct: 143 CQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 202
Query: 175 RPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKN 213
PE G + + D++S+GC+ E+L G+P G +
Sbjct: 203 LSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDS 240
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 54/274 (19%)
Query: 22 LKKIRMDNEKEGFPITAI-REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRG 80
+KK R + + G I RE+ ILK++QH NVI L E+ + +
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN----------------KT 87
Query: 81 STYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNL 138
++ E + LA++ L T + ++KQ+L G++Y H Q+ H D+K N+
Sbjct: 88 DVILILELVAGGELFDFLAEKESL--TEEEATEFLKQILNGVYYLHSLQIAHFDLKPENI 145
Query: 139 LIDNEG----NLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWS 194
++ + +K+ DFGLA D N N T + PE ++ G DMWS
Sbjct: 146 MLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPE-IVNYEPLGLEADMWS 202
Query: 195 VGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRR 254
+G I LL+G G + E L+ + + ++ + S +
Sbjct: 203 IGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL--------------- 247
Query: 255 VREVFRHFDRHALELLEKMLMLDPSQRISAKDAL 288
A + + ++L+ DP +R++ +D+L
Sbjct: 248 -----------AKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 76/144 (52%), Gaps = 4/144 (2%)
Query: 79 RGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNL 138
+ + + V EY++ + +F + + Y +++ GL + H +++RD+K N+
Sbjct: 91 KENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNI 150
Query: 139 LIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPELLLGATKYGPAVDMWSVGC 197
L+D +G++K+ADFG+ + + TN T Y PE+LLG KY +VD WS G
Sbjct: 151 LLDKDGHIKIADFGMCKENML--GDAKTNEFCGTPDYIAPEILLG-QKYNHSVDWWSFGV 207
Query: 198 IFAELLNGKPILPGKNEAEQLSKI 221
+ E+L G+ G++E E I
Sbjct: 208 LLYEMLIGQSPFHGQDEEELFHSI 231
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 28/226 (12%)
Query: 22 LKKIRMDNEKEGFPITAI-REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRG 80
+KK R+ + + G I RE+ IL++++H N+I L +I + +
Sbjct: 59 IKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN----------------KT 102
Query: 81 STYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNL 138
++ E + LA++ L T + ++KQ+L G+HY H ++ H D+K N+
Sbjct: 103 DVVLILELVSGGELFDFLAEKESL--TEDEATQFLKQILDGVHYLHSKRIAHFDLKPENI 160
Query: 139 LIDNEG----NLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWS 194
++ ++ +KL DFG+A + N N T + PE ++ G DMWS
Sbjct: 161 MLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFGTPEFVAPE-IVNYEPLGLEADMWS 217
Query: 195 VGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMP 240
+G I LL+G G+ + E L+ I + DE + S++
Sbjct: 218 IGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELA 263
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 33/220 (15%)
Query: 17 GEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGN 76
G+I+ K++ + E + E+ +L++L+H N+++ + + +
Sbjct: 31 GKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRII--------------D 76
Query: 77 KYRGSTYMVFEYMDH-DLT-----GLADRPGL--RFTVPQIKCYMKQLLTGLHYCHV--- 125
+ + Y+V EY + DL G +R L F + M QL L CH
Sbjct: 77 RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLR----VMTQLTLALKECHRRSD 132
Query: 126 --NQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
+ VLHRD+K +N+ +D + N+KL DFGLAR ++D + V T +Y PE +
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFA-KEFVGTPYYMSPE-QMNR 190
Query: 184 TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFE 223
Y D+WS+GC+ EL P ++ E KI E
Sbjct: 191 MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE 230
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 119/275 (43%), Gaps = 56/275 (20%)
Query: 22 LKKIRMDNEKEGFPITAI-REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRG 80
+KK R + + G I RE+ ILK++QH NVI L E+ + +
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN----------------KT 87
Query: 81 STYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNL 138
++ E + LA++ L T + ++KQ+L G++Y H Q+ H D+K N+
Sbjct: 88 DVILILELVAGGELFDFLAEKESL--TEEEATEFLKQILNGVYYLHSLQIAHFDLKPENI 145
Query: 139 LIDNEG----NLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWS 194
++ + +K+ DFGLA D N N T + PE ++ G DMWS
Sbjct: 146 MLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPE-IVNYEPLGLEADMWS 202
Query: 195 VGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNH-FKPSRTMKR 253
+G I LL+G G + E L+ + A N+ F+
Sbjct: 203 IGVITYILLSGASPFLGDTKQETLANV------------------SAVNYEFED------ 238
Query: 254 RVREVFRHFDRHALELLEKMLMLDPSQRISAKDAL 288
E F + A + + ++L+ DP +R++ +D+L
Sbjct: 239 ---EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 38/213 (17%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V+ A+ +T + A K I +E+E EI IL H N++KL
Sbjct: 52 KVYKAQNKETSVLAAAKVIDTKSEEELEDYMV--EIDILASCDHPNIVKL---------- 99
Query: 67 RDEQGRPDGNKYRGSTYMVFEY-----MDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
D Y + +++ E+ +D + L +RP T QI+ KQ L L+
Sbjct: 100 ------LDAFYYENNLWILIEFCAGGAVDAVMLEL-ERP---LTESQIQVVCKQTLDALN 149
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR---VITLWYRPPE 178
Y H N+++HRD+K N+L +G++KLADFG+ S + + R + T ++ PE
Sbjct: 150 YLHDNKIIHRDLKAGNILFTLDGDIKLADFGV----SAKNTRXIQRRDSFIGTPYWMAPE 205
Query: 179 LLLGATK----YGPAVDMWSVGCIFAELLNGKP 207
+++ T Y D+WS+G E+ +P
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYM-DHDLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS 131
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 132 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R TL Y PE++L + Y AVD W++G + E+ G P
Sbjct: 191 R--------VKGRTWTLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 12/148 (8%)
Query: 79 RGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNL 138
+ + + V EY++ + +F + + Y +++ GL + H +++RD+K N+
Sbjct: 90 KENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNI 149
Query: 139 LIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLW-----YRPPELLLGATKYGPAVDMW 193
L+D +G++K+ADFG+ + N L + + Y PE+LLG KY +VD W
Sbjct: 150 LLDKDGHIKIADFGMCKE------NMLGDAKTNXFCGTPDYIAPEILLG-QKYNHSVDWW 202
Query: 194 SVGCIFAELLNGKPILPGKNEAEQLSKI 221
S G + E+L G+ G++E E I
Sbjct: 203 SFGVLLYEMLIGQSPFHGQDEEELFHSI 230
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYM-DHDLTG 95
+K L + V+KLKEI + +R Q K + YMV EY ++
Sbjct: 71 MKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NL+ID +G +K+ DFGLA+
Sbjct: 131 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAK 189
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 190 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 54/274 (19%)
Query: 22 LKKIRMDNEKEGFPITAI-REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRG 80
+KK R + + G I RE+ ILK++QH NVI L E+ + +
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN----------------KT 87
Query: 81 STYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNL 138
++ E + LA++ L T + ++KQ+L G++Y H Q+ H D+K N+
Sbjct: 88 DVILILELVAGGELFDFLAEKESL--TEEEATEFLKQILNGVYYLHSLQIAHFDLKPENI 145
Query: 139 LIDNEG----NLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWS 194
++ + +K+ DFGLA D N N T + PE ++ G DMWS
Sbjct: 146 MLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPE-IVNYEPLGLEADMWS 202
Query: 195 VGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRR 254
+G I LL+G G + E L+ + + ++ + S +
Sbjct: 203 IGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL--------------- 247
Query: 255 VREVFRHFDRHALELLEKMLMLDPSQRISAKDAL 288
A + + ++L+ DP +R++ +D+L
Sbjct: 248 -----------AKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 38/213 (17%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V+ A+ +T + A K I +E+E EI IL H N++KL
Sbjct: 52 KVYKAQNKETSVLAAAKVIDTKSEEELEDYMV--EIDILASCDHPNIVKL---------- 99
Query: 67 RDEQGRPDGNKYRGSTYMVFEY-----MDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
D Y + +++ E+ +D + L +RP T QI+ KQ L L+
Sbjct: 100 ------LDAFYYENNLWILIEFCAGGAVDAVMLEL-ERP---LTESQIQVVCKQTLDALN 149
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR---VITLWYRPPE 178
Y H N+++HRD+K N+L +G++KLADFG+ S + + R + T ++ PE
Sbjct: 150 YLHDNKIIHRDLKAGNILFTLDGDIKLADFGV----SAKNTRXIQRRDXFIGTPYWMAPE 205
Query: 179 LLLGATK----YGPAVDMWSVGCIFAELLNGKP 207
+++ T Y D+WS+G E+ +P
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 54/274 (19%)
Query: 22 LKKIRMDNEKEGFPITAI-REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRG 80
+KK R + + G I RE+ ILK++QH NVI L E+ + +
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN----------------KT 87
Query: 81 STYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNL 138
++ E + LA++ L T + ++KQ+L G++Y H Q+ H D+K N+
Sbjct: 88 DVILILELVAGGELFDFLAEKESL--TEEEATEFLKQILNGVYYLHSLQIAHFDLKPENI 145
Query: 139 LIDNEG----NLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWS 194
++ + +K+ DFGLA D N N T + PE ++ G DMWS
Sbjct: 146 MLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPE-IVNYEPLGLEADMWS 202
Query: 195 VGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRR 254
+G I LL+G G + E L+ + + ++ + S +
Sbjct: 203 IGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL--------------- 247
Query: 255 VREVFRHFDRHALELLEKMLMLDPSQRISAKDAL 288
A + + ++L+ DP +R++ +D+L
Sbjct: 248 -----------AKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 88/196 (44%), Gaps = 29/196 (14%)
Query: 16 TGEIVALKKIRMD---NEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGR 72
TGE+VA+K ++ + G+ REI+IL+ L HE+++K K G +
Sbjct: 37 TGEMVAVKALKEGCGPQLRSGWQ----REIEILRTLYHEHIVKYKGCCEDQGEK------ 86
Query: 73 PDGNKYRGSTYMVFEYMDHDLTGLADR-PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHR 131
S +V EY+ L L D P + Q+ + +Q+ G+ Y H +HR
Sbjct: 87 --------SVQLVMEYVP--LGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHR 136
Query: 132 DIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR---VITLWYRPPELLLGATKYGP 188
+ N+L+DN+ +K+ DFGLA++ H WY P L K+
Sbjct: 137 ALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE--CLKECKFYY 194
Query: 189 AVDMWSVGCIFAELLN 204
A D+WS G ELL
Sbjct: 195 ASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 88/196 (44%), Gaps = 29/196 (14%)
Query: 16 TGEIVALKKIRMD---NEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGR 72
TGE+VA+K ++ + G+ REI+IL+ L HE+++K K G +
Sbjct: 36 TGEMVAVKALKEGCGPQLRSGWQ----REIEILRTLYHEHIVKYKGCCEDQGEK------ 85
Query: 73 PDGNKYRGSTYMVFEYMDHDLTGLADR-PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHR 131
S +V EY+ L L D P + Q+ + +Q+ G+ Y H +HR
Sbjct: 86 --------SVQLVMEYVP--LGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHR 135
Query: 132 DIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR---VITLWYRPPELLLGATKYGP 188
+ N+L+DN+ +K+ DFGLA++ H WY P L K+
Sbjct: 136 ALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE--CLKECKFYY 193
Query: 189 AVDMWSVGCIFAELLN 204
A D+WS G ELL
Sbjct: 194 ASDVWSFGVTLYELLT 209
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 36/212 (16%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V+ A+ +TG + A K I +E+E I EI+IL H ++KL
Sbjct: 34 KVYKAKNKETGALAAAKVIETKSEEELE--DYIVEIEILATCDHPYIVKLL--------- 82
Query: 67 RDEQGRPDGNKYR-GSTYMVFEYM---DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHY 122
G Y G +++ E+ D L GL T PQI+ +Q+L L++
Sbjct: 83 --------GAYYHDGKLWIMIEFCPGGAVDAIMLELDRGL--TEPQIQVVCRQMLEALNF 132
Query: 123 CHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR---VITLWYRPPEL 179
H +++HRD+K N+L+ EG+++LADFG+ S + TL R + T ++ PE+
Sbjct: 133 LHSKRIIHRDLKAGNVLMTLEGDIRLADFGV----SAKNLKTLQKRDSFIGTPYWMAPEV 188
Query: 180 LLGATK----YGPAVDMWSVGCIFAELLNGKP 207
++ T Y D+WS+G E+ +P
Sbjct: 189 VMCETMKDTPYDYKADIWSLGITLIEMAQIEP 220
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 22/170 (12%)
Query: 40 REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTG-LA 97
RE+ +L ++H N+++ +E + GS Y+V +Y + DL +
Sbjct: 72 REVAVLANMKHPNIVQYRE----------------SFEENGSLYIVMDYCEGGDLFKRIN 115
Query: 98 DRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF 157
+ G+ F QI + Q+ L + H ++LHRDIK N+ + +G ++L DFG+AR
Sbjct: 116 AQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL 175
Query: 158 SYDHNNTLTNRVI-TLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK 206
+ L I T +Y PE+ Y D+W++GC+ EL K
Sbjct: 176 --NSTVELARACIGTPYYLSPEICENKP-YNNKSDIWALGCVLYELCTLK 222
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 33/225 (14%)
Query: 4 CISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
C +V+M T VA+K ++ P ++E +++KKL+HE +++L +V+
Sbjct: 279 CFGEVWMGTWNGTTR-VAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSEE 334
Query: 64 GPERDEQGRPDGNKYRGSTYMVFEYMDHD--LTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
Y+V EYM L L G +PQ+ Q+ +G+
Sbjct: 335 -----------------PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 377
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR----VITLWYRPP 177
Y +HRD++ +N+L+ K+ADFGLAR +N T R W P
Sbjct: 378 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPE 434
Query: 178 ELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKI 221
L G ++ D+WS G + EL G+ PG E L ++
Sbjct: 435 AALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 477
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 36/212 (16%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+V+ A+ +TG + A K I +E+E I EI+IL H ++KL
Sbjct: 26 KVYKAKNKETGALAAAKVIETKSEEELE--DYIVEIEILATCDHPYIVKLL--------- 74
Query: 67 RDEQGRPDGNKYR-GSTYMVFEYM---DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHY 122
G Y G +++ E+ D L GL T PQI+ +Q+L L++
Sbjct: 75 --------GAYYHDGKLWIMIEFCPGGAVDAIMLELDRGL--TEPQIQVVCRQMLEALNF 124
Query: 123 CHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR---VITLWYRPPEL 179
H +++HRD+K N+L+ EG+++LADFG+ S + TL R + T ++ PE+
Sbjct: 125 LHSKRIIHRDLKAGNVLMTLEGDIRLADFGV----SAKNLKTLQKRDSFIGTPYWMAPEV 180
Query: 180 LLGATK----YGPAVDMWSVGCIFAELLNGKP 207
++ T Y D+WS+G E+ +P
Sbjct: 181 VMCETMKDTPYDYKADIWSLGITLIEMAQIEP 212
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 33/226 (14%)
Query: 82 TYMVFEYMDHD-------LTGLADRPGLRFT-VPQIKCYMKQLLTGLHYCHVNQ-VLHRD 132
Y+++EYM++D + D+ F + IKC +K +L Y H + + HRD
Sbjct: 118 VYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRD 177
Query: 133 IKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY-GPAVD 191
+K SN+L+D G +KL+DFG + Y + + T + PPE + Y G VD
Sbjct: 178 VKPSNILMDKNGRVKLSDFGESE---YMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVD 234
Query: 192 MWSVG-CIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAY----NHFK 246
+WS+G C++ N P F L S E +K Y NHF
Sbjct: 235 IWSLGICLYVMFYNVVP--------------FSLKISLVELFNNIRTKNIEYPLDRNHFL 280
Query: 247 PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEY 292
T K+ ++ L+ L +P++RI+++DAL E+
Sbjct: 281 YPLTNKKSTCSN-NFLSNEDIDFLKLFLRKNPAERITSEDALKHEW 325
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYM-DHDLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 57 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS 116
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 117 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 175
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R TL Y PE++L + Y AVD W++G + E+ G P
Sbjct: 176 R--------VKGRTWTLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 222
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 122/297 (41%), Gaps = 54/297 (18%)
Query: 10 MAREIKTGEIVALKKIRMDNEKEGFPI--TAIREIKILKKLQHENVIKLKEIVTSPGPER 67
+ R+ T E+VA+K I + G I REI + L+H N+++ KE++ +P
Sbjct: 38 LMRDKLTKELVAVKYI-----ERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPT--- 89
Query: 68 DEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
++ EY +L G RF+ + + + +QLL+G+ YCH
Sbjct: 90 -------------HLAIIMEYASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCHSM 135
Query: 127 QVLHRDIKGSNLLIDNE--GNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGAT 184
Q+ HRD+K N L+D LK+ DFG ++S S H+ + V T Y PE+LL
Sbjct: 136 QICHRDLKLENTLLDGSPAPRLKICDFGYSKS-SVLHSQP-KSTVGTPAYIAPEVLLRQE 193
Query: 185 KYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNH 244
G D+WS G +L G E K + S +I + P H
Sbjct: 194 YDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCH 253
Query: 245 FKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDPLPCD 301
L+ ++ + DP+ RIS + +F + LP D
Sbjct: 254 ------------------------LISRIFVADPATRISIPEIKTHSWFLKN-LPAD 285
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 74/137 (54%), Gaps = 10/137 (7%)
Query: 75 GNKYRGS-TYMVFEYMDHDLTGLADRPGLR---FTVPQIKCYMKQLLTGLHYCHVNQVLH 130
G+ +GS +++ EY L G + LR F QI +K++L GL Y H + +H
Sbjct: 88 GSYLKGSKLWIIMEY----LGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIH 143
Query: 131 RDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAV 190
RDIK +N+L+ +G++KLADFG+A + D V T ++ PE ++ + Y
Sbjct: 144 RDIKAANVLLSEQGDVKLADFGVAGQLT-DTQIKRNTFVGTPFWMAPE-VIQQSAYDSKA 201
Query: 191 DMWSVGCIFAELLNGKP 207
D+WS+G EL G+P
Sbjct: 202 DIWSLGITAIELAKGEP 218
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 35/221 (15%)
Query: 17 GEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGN 76
G+I+ K++ + E + E+ +L++L+H N+++ + + +
Sbjct: 31 GKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRII--------------D 76
Query: 77 KYRGSTYMVFEYMDH-DLT-----GLADRPGL--RFTVPQIKCYMKQLLTGLHYCHV--- 125
+ + Y+V EY + DL G +R L F + M QL L CH
Sbjct: 77 RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLR----VMTQLTLALKECHRRSD 132
Query: 126 --NQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPELLLG 182
+ VLHRD+K +N+ +D + N+KL DFGLAR +H+ + + T +Y PE +
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSFAKAFVGTPYYMSPE-QMN 189
Query: 183 ATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFE 223
Y D+WS+GC+ EL P ++ E KI E
Sbjct: 190 RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE 230
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 130/314 (41%), Gaps = 64/314 (20%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGR------P 73
VALK IR + + A EI +LKK++ E+D++ +
Sbjct: 48 VALKIIRNVGK---YREAARLEINVLKKIK----------------EKDKENKFLCVLMS 88
Query: 74 DGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVNQVLHRD 132
D + G + FE + + + + +P ++ QL L + H NQ+ H D
Sbjct: 89 DWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTD 148
Query: 133 IKGSNLLIDNE-------------------GNLKLADFGLARSFSYDHNNTLTNRVITLW 173
+K N+L N ++++ADFG A +F ++H+ T+ V T
Sbjct: 149 LKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA-TFDHEHHTTI---VATRH 204
Query: 174 YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCG-SPDETI 232
YRPPE++L P D+WS+GCI E G + E L + ++ G P I
Sbjct: 205 YRPPEVILELGWAQPC-DVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMI 263
Query: 233 WPGVSKMPAY-------NHFKPSRTMKRRVREVFRHFDRHALE------LLEKMLMLDPS 279
+ Y + R +K + + + + +LE L+ +ML DP+
Sbjct: 264 HRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPA 323
Query: 280 QRISAKDALDSEYF 293
QRI+ +AL +F
Sbjct: 324 QRITLAEALLHPFF 337
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 130/314 (41%), Gaps = 64/314 (20%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGR------P 73
VALK IR + + A EI +LKK++ E+D++ +
Sbjct: 57 VALKIIRNVGK---YREAARLEINVLKKIK----------------EKDKENKFLCVLMS 97
Query: 74 DGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVNQVLHRD 132
D + G + FE + + + + +P ++ QL L + H NQ+ H D
Sbjct: 98 DWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTD 157
Query: 133 IKGSNLLIDNE-------------------GNLKLADFGLARSFSYDHNNTLTNRVITLW 173
+K N+L N ++++ADFG A +F ++H+ T+ V T
Sbjct: 158 LKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA-TFDHEHHTTI---VATRH 213
Query: 174 YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCG-SPDETI 232
YRPPE++L P D+WS+GCI E G + E L + ++ G P I
Sbjct: 214 YRPPEVILELGWAQPC-DVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMI 272
Query: 233 WPGVSKMPAY-------NHFKPSRTMKRRVREVFRHFDRHALE------LLEKMLMLDPS 279
+ Y + R +K + + + + +LE L+ +ML DP+
Sbjct: 273 HRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPA 332
Query: 280 QRISAKDALDSEYF 293
QRI+ +AL +F
Sbjct: 333 QRITLAEALLHPFF 346
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 130/314 (41%), Gaps = 64/314 (20%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGR------P 73
VALK IR + + A EI +LKK++ E+D++ +
Sbjct: 80 VALKIIRNVGK---YREAARLEINVLKKIK----------------EKDKENKFLCVLMS 120
Query: 74 DGNKYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVNQVLHRD 132
D + G + FE + + + + +P ++ QL L + H NQ+ H D
Sbjct: 121 DWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTD 180
Query: 133 IKGSNLLIDNE-------------------GNLKLADFGLARSFSYDHNNTLTNRVITLW 173
+K N+L N ++++ADFG A +F ++H+ T+ V T
Sbjct: 181 LKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA-TFDHEHHTTI---VATRH 236
Query: 174 YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCG-SPDETI 232
YRPPE++L P D+WS+GCI E G + E L + ++ G P I
Sbjct: 237 YRPPEVILELGWAQPC-DVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMI 295
Query: 233 WPGVSKMPAY-------NHFKPSRTMKRRVREVFRHFDRHALE------LLEKMLMLDPS 279
+ Y + R +K + + + + +LE L+ +ML DP+
Sbjct: 296 HRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPA 355
Query: 280 QRISAKDALDSEYF 293
QRI+ +AL +F
Sbjct: 356 QRITLAEALLHPFF 369
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYM-DHDLTG 95
+K L + V+KLKEI + +R Q K + YMV EY ++
Sbjct: 71 MKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NL+ID +G +++ DFGLA+
Sbjct: 131 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAK 189
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 190 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 116/257 (45%), Gaps = 57/257 (22%)
Query: 40 REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDL-TG--L 96
RE +I + L+H N+++L + ++ G F Y+ DL TG L
Sbjct: 52 REARICRLLKHPNIVRLHDSISEEG---------------------FHYLVFDLVTGGEL 90
Query: 97 ADRPGLR--FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGN---LKLADF 151
+ R ++ ++Q+L +++CH+N ++HRD+K NLL+ ++ +KLADF
Sbjct: 91 FEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADF 150
Query: 152 GLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPG 211
GLA D T Y PE +L YG VDMW+ G I LL G P
Sbjct: 151 GLAIEVQGDQQAWF-GFAGTPGYLSPE-VLRKDPYGKPVDMWACGVILYILLVGYPPFWD 208
Query: 212 KNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLE 271
+++ +I G+ D +P P ++ P A +L+
Sbjct: 209 EDQHRLYQQI--KAGAYD---FPS----PEWDTVTP-----------------EAKDLIN 242
Query: 272 KMLMLDPSQRISAKDAL 288
KML ++P++RI+A +AL
Sbjct: 243 KMLTINPAKRITASEAL 259
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 68/122 (55%), Gaps = 6/122 (4%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN 163
FT + + Y ++++ L Y H V++RDIK NL++D +G++K+ DFGL + D
Sbjct: 105 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GA 163
Query: 164 TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFE 223
T+ T Y PE +L YG AVD W +G + E++ G+ LP N+ + ++FE
Sbjct: 164 TMKTFCGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE--RLFE 218
Query: 224 LC 225
L
Sbjct: 219 LI 220
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+K I+ + E I E K++ L HE +++L + T P
Sbjct: 51 VAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGVCTKQRP-------------- 93
Query: 80 GSTYMVFEYMDHD-LTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNL 138
+++ EYM + L RF Q+ K + + Y Q LHRD+ N
Sbjct: 94 --IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNC 151
Query: 139 LIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCI 198
L++++G +K++DFGL+R D + + + PPE+L+ +K+ D+W+ G +
Sbjct: 152 LVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLM-YSKFSSKSDIWAFGVL 210
Query: 199 FAEL 202
E+
Sbjct: 211 MWEI 214
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 114/257 (44%), Gaps = 57/257 (22%)
Query: 40 REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTG---L 96
RE +I + L+H N+++L + ++ G F Y+ DL L
Sbjct: 52 REARICRLLKHPNIVRLHDSISEEG---------------------FHYLVFDLVTGGEL 90
Query: 97 ADRPGLR--FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGN---LKLADF 151
+ R ++ ++Q+L +++CH+N ++HRD+K NLL+ ++ +KLADF
Sbjct: 91 FEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADF 150
Query: 152 GLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPG 211
GLA D T Y PE +L YG VDMW+ G I LL G P
Sbjct: 151 GLAIEVQGDQQAWF-GFAGTPGYLSPE-VLRKDPYGKPVDMWACGVILYILLVGYPPFWD 208
Query: 212 KNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLE 271
+++ +I G+ D +P P ++ P A +L+
Sbjct: 209 EDQHRLYQQI--KAGAYD---FPS----PEWDTVTPE-----------------AKDLIN 242
Query: 272 KMLMLDPSQRISAKDAL 288
KML ++P++RI+A +AL
Sbjct: 243 KMLTINPAKRITASEAL 259
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 68/121 (56%), Gaps = 6/121 (4%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN 163
FT + + Y ++++ L Y H V++RDIK NL++D +G++K+ DFGL + D
Sbjct: 102 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GA 160
Query: 164 TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFE 223
T+ T Y PE +L YG AVD W +G + E++ G+ LP N+ + ++FE
Sbjct: 161 TMKTFCGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE--RLFE 215
Query: 224 L 224
L
Sbjct: 216 L 216
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 68/122 (55%), Gaps = 6/122 (4%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN 163
FT + + Y ++++ L Y H V++RDIK NL++D +G++K+ DFGL + D
Sbjct: 102 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GA 160
Query: 164 TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFE 223
T+ T Y PE +L YG AVD W +G + E++ G+ LP N+ + ++FE
Sbjct: 161 TMKTFCGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE--RLFE 215
Query: 224 LC 225
L
Sbjct: 216 LI 217
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 15/172 (8%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYMDH-DLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 92 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 151
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 152 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
Query: 156 SFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
TL T Y PE++L + Y AVD W++G + E+ G P
Sbjct: 211 RVK-GATWTLCG---TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 257
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYM-DHDLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 92 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS 151
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 152 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 211 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 257
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 68/122 (55%), Gaps = 6/122 (4%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN 163
FT + + Y ++++ L Y H V++RDIK NL++D +G++K+ DFGL + D
Sbjct: 107 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GA 165
Query: 164 TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFE 223
T+ T Y PE +L YG AVD W +G + E++ G+ LP N+ + ++FE
Sbjct: 166 TMKXFCGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE--RLFE 220
Query: 224 LC 225
L
Sbjct: 221 LI 222
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYMDH-DLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 131 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 190 R--------VKGRTWXLXGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYMDH-DLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 131 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 190 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYM-DHDLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS 131
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 132 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 191 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYMDH-DLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 131 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 190 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYMDH-DLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 131
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 132 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 191 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYMDH-DLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 131 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 190 R--------VKGRTWXLAGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYMDH-DLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 131 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 190 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYM-DHDLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS 131
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 132 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 191 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYM-DHDLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS 131
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 132 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 191 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 68/122 (55%), Gaps = 6/122 (4%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN 163
FT + + Y ++++ L Y H V++RDIK NL++D +G++K+ DFGL + D
Sbjct: 102 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GA 160
Query: 164 TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFE 223
T+ T Y PE +L YG AVD W +G + E++ G+ LP N+ + ++FE
Sbjct: 161 TMKXFCGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE--RLFE 215
Query: 224 LC 225
L
Sbjct: 216 LI 217
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYMDH-DLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 131 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 190 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYM-DHDLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 131 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 190 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYM-DHDLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 131 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 190 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYMDH-DLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 131 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 190 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYMDH-DLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 131 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 190 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYM-DHDLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS 131
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 132 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 191 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 68/122 (55%), Gaps = 6/122 (4%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN 163
FT + + Y ++++ L Y H V++RDIK NL++D +G++K+ DFGL + D
Sbjct: 102 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GA 160
Query: 164 TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFE 223
T+ T Y PE +L YG AVD W +G + E++ G+ LP N+ + ++FE
Sbjct: 161 TMKXFCGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE--RLFE 215
Query: 224 LC 225
L
Sbjct: 216 LI 217
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 68/122 (55%), Gaps = 6/122 (4%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN 163
FT + + Y ++++ L Y H V++RDIK NL++D +G++K+ DFGL + D
Sbjct: 102 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GA 160
Query: 164 TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFE 223
T+ T Y PE +L YG AVD W +G + E++ G+ LP N+ + ++FE
Sbjct: 161 TMKXFCGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE--RLFE 215
Query: 224 LC 225
L
Sbjct: 216 LI 217
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 28/190 (14%)
Query: 39 IREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHD--LTGL 96
+ E ++K LQH+ +++L +VT P Y++ EYM L L
Sbjct: 56 LEEANLMKTLQHDKLVRLYAVVTREEP----------------IYIITEYMAKGSLLDFL 99
Query: 97 ADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARS 156
G + +P++ + Q+ G+ Y +HRD++ +N+L+ K+ADFGLAR
Sbjct: 100 KSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARV 159
Query: 157 FSYDHNNTLTNR----VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPG 211
+N T R W P + G + D+WS G + E++ GK PG
Sbjct: 160 I---EDNEYTAREGAKFPIKWTAPEAINFGC--FTIKSDVWSFGILLYEIVTYGKIPYPG 214
Query: 212 KNEAEQLSKI 221
+ A+ ++ +
Sbjct: 215 RTNADVMTAL 224
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYM-DHDLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 131 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 190 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQGR--PDGNKYRGS------TYMVFEYM-DHDLTG 95
+K L + V+KLK+I + +R Q P K S YMV EY ++
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS 131
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NL+ID +G +K+ DFG A+
Sbjct: 132 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 191 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYM-DHDLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 131 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 190 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 98/227 (43%), Gaps = 39/227 (17%)
Query: 76 NKYRGSTYM--VFEYMDHD--LTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHR 131
+ Y S++M VF+ M L ++ L + + + M+ LL + + H N ++HR
Sbjct: 167 DSYESSSFMFLVFDLMRKGELFDYLTEKVAL--SEKETRSIMRSLLEAVSFLHANNIVHR 224
Query: 132 DIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATK-----Y 186
D+K N+L+D+ ++L+DFG S + L T Y PE+L + Y
Sbjct: 225 DLKPENILLDDNMQIRLSDFGF--SCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGY 282
Query: 187 GPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFK 246
G VD+W+ G I LL G P + + L I E G + +
Sbjct: 283 GKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIME-----------GQYQFSSPEWDD 331
Query: 247 PSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
S T+K +L+ ++L +DP R++A+ AL +F
Sbjct: 332 RSSTVK---------------DLISRLLQVDPEARLTAEQALQHPFF 363
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYM-DHDLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 131 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 190 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 33/225 (14%)
Query: 4 CISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
C +V+M T VA+K ++ P ++E +++KKL+HE +++L +V+
Sbjct: 30 CFGEVWMGTWNGTTR-VAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 64 GPERDEQGRPDGNKYRGSTYMVFEYMDHD--LTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
Y+V EYM L L G +PQ+ Q+ +G+
Sbjct: 86 -----------------PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR----VITLWYRPP 177
Y +HRD++ +N+L+ K+ADFGLAR +N T R W P
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPE 185
Query: 178 ELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKI 221
L G ++ D+WS G + EL G+ PG E L ++
Sbjct: 186 AALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYM-DHDLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 131 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 190 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYM-DHDLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 64 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS 123
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 124 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 182
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 183 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 229
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+K I+ + E I E K++ L HE +++L + T P
Sbjct: 51 VAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGVCTKQRP-------------- 93
Query: 80 GSTYMVFEYMDHD-LTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNL 138
+++ EYM + L RF Q+ K + + Y Q LHRD+ N
Sbjct: 94 --IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNC 151
Query: 139 LIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCI 198
L++++G +K++DFGL+R D + + + PPE+L+ +K+ D+W+ G +
Sbjct: 152 LVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLM-YSKFSSKSDIWAFGVL 210
Query: 199 FAEL 202
E+
Sbjct: 211 MWEI 214
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYM-DHDLTG 95
+K L + V+KLK+I + +R Q K + YMV EY ++
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS 131
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NL+ID +G +K+ DFG A+
Sbjct: 132 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 191 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 33/225 (14%)
Query: 4 CISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
C +V+M T VA+K ++ P ++E +++KKL+HE +++L +V+
Sbjct: 30 CFGEVWMGTWNGTTR-VAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 64 GPERDEQGRPDGNKYRGSTYMVFEYMDHD--LTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
Y+V EYM L L G +PQ+ Q+ +G+
Sbjct: 86 -----------------PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR----VITLWYRPP 177
Y +HRD++ +N+L+ K+ADFGLAR +N T R W P
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLI---EDNEXTARQGAKFPIKWTAPE 185
Query: 178 ELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKI 221
L G ++ D+WS G + EL G+ PG E L ++
Sbjct: 186 AALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQGR--PDGNKYRGS------TYMVFEYM-DHDLTG 95
+K L + V+KLK+I + +R Q P K S YMV EY ++
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS 131
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NL+ID +G +K+ DFG A+
Sbjct: 132 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 191 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYM-DHDLTG 95
+K L + V+KLK+I + +R Q K + YMV EY ++
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NL+ID +G +K+ DFG A+
Sbjct: 131 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 189
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 190 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 8/134 (5%)
Query: 79 RGSTYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGS 136
R +V E +D + + DR FT + MK + + Y H + HRD+K
Sbjct: 137 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 196
Query: 137 NLLIDNE---GNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMW 193
NLL ++ LKL DFG A+ + +N+LT T +Y PE +LG KY + DMW
Sbjct: 197 NLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMW 253
Query: 194 SVGCIFAELLNGKP 207
S+G I LL G P
Sbjct: 254 SLGVIMYILLCGYP 267
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 8/134 (5%)
Query: 79 RGSTYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGS 136
R +V E +D + + DR FT + MK + + Y H + HRD+K
Sbjct: 87 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 146
Query: 137 NLLIDNE---GNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMW 193
NLL ++ LKL DFG A+ + +N+LT T +Y PE +LG KY + DMW
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMW 203
Query: 194 SVGCIFAELLNGKP 207
S+G I LL G P
Sbjct: 204 SLGVIMYILLCGYP 217
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 8/134 (5%)
Query: 79 RGSTYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGS 136
R +V E +D + + DR FT + MK + + Y H + HRD+K
Sbjct: 131 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 190
Query: 137 NLLIDNE---GNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMW 193
NLL ++ LKL DFG A+ + +N+LT T +Y PE +LG KY + DMW
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMW 247
Query: 194 SVGCIFAELLNGKP 207
S+G I LL G P
Sbjct: 248 SLGVIMYILLCGYP 261
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 8/134 (5%)
Query: 79 RGSTYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGS 136
R +V E +D + + DR FT + MK + + Y H + HRD+K
Sbjct: 91 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 150
Query: 137 NLLIDNE---GNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMW 193
NLL ++ LKL DFG A+ + +N+LT T +Y PE +LG KY + DMW
Sbjct: 151 NLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMW 207
Query: 194 SVGCIFAELLNGKP 207
S+G I LL G P
Sbjct: 208 SLGVIMYILLCGYP 221
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYMDH-DLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 58 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 117
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 118 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAK 176
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 177 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 223
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 33/225 (14%)
Query: 4 CISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
C +V+M T VA+K ++ N P ++E +++KKL+HE +++L +V+
Sbjct: 197 CFGEVWMGTWNGTTR-VAIKTLKPGNMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSEE 252
Query: 64 GPERDEQGRPDGNKYRGSTYMVFEYMDHD--LTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
Y+V EYM L L G +PQ+ Q+ +G+
Sbjct: 253 -----------------PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 295
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR----VITLWYRPP 177
Y +HRD++ +N+L+ K+ADFGL R +N T R W P
Sbjct: 296 YVERMNYVHRDLRAANILVGENLVCKVADFGLGRLI---EDNEYTARQGAKFPIKWTAPE 352
Query: 178 ELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKI 221
L G ++ D+WS G + EL G+ PG E L ++
Sbjct: 353 AALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 395
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 33/225 (14%)
Query: 4 CISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
C +V+M T VA+K ++ P ++E +++KKL+HE +++L +V+
Sbjct: 30 CFGEVWMGTWNGTTR-VAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 64 GPERDEQGRPDGNKYRGSTYMVFEYMDHD--LTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
Y+V EYM L L G +PQ+ Q+ +G+
Sbjct: 86 -----------------PIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR----VITLWYRPP 177
Y +HRD++ +N+L+ K+ADFGLAR +N T R W P
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPE 185
Query: 178 ELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKI 221
L G ++ D+WS G + EL G+ PG E L ++
Sbjct: 186 AALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 8/134 (5%)
Query: 79 RGSTYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGS 136
R +V E +D + + DR FT + MK + + Y H + HRD+K
Sbjct: 93 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 152
Query: 137 NLLIDNE---GNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMW 193
NLL ++ LKL DFG A+ + +N+LT T +Y PE +LG KY + DMW
Sbjct: 153 NLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMW 209
Query: 194 SVGCIFAELLNGKP 207
S+G I LL G P
Sbjct: 210 SLGVIMYILLCGYP 223
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYMDH-DLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 131 HLRRIG-RFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 190 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 8/134 (5%)
Query: 79 RGSTYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGS 136
R +V E +D + + DR FT + MK + + Y H + HRD+K
Sbjct: 92 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 151
Query: 137 NLLIDNE---GNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMW 193
NLL ++ LKL DFG A+ + +N+LT T +Y PE +LG KY + DMW
Sbjct: 152 NLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMW 208
Query: 194 SVGCIFAELLNGKP 207
S+G I LL G P
Sbjct: 209 SLGVIMYILLCGYP 222
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 14 IKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRP 73
+ ++ A+ I + K+ F +EIK+ K QHEN+++L
Sbjct: 48 VAVKKLAAMVDITTEELKQQFD----QEIKVXAKCQHENLVELLGF------------SS 91
Query: 74 DGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQI----KCYMKQ-LLTGLHYCHVNQV 128
DG+ +V+ Y + L DR P + +C + Q G+++ H N
Sbjct: 92 DGD----DLCLVYVYXPNG--SLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH 145
Query: 129 LHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPELLLGATKYG 187
+HRDIK +N+L+D K++DFGLAR+ +R++ T Y PE L G +
Sbjct: 146 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRG--EIT 203
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQL 218
P D++S G + E++ G P + E + L
Sbjct: 204 PKSDIYSFGVVLLEIITGLPAVDEHREPQLL 234
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 8/134 (5%)
Query: 79 RGSTYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGS 136
R +V E +D + + DR FT + MK + + Y H + HRD+K
Sbjct: 101 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 160
Query: 137 NLLIDNE---GNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMW 193
NLL ++ LKL DFG A+ + +N+LT T +Y PE +LG KY + DMW
Sbjct: 161 NLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMW 217
Query: 194 SVGCIFAELLNGKP 207
S+G I LL G P
Sbjct: 218 SLGVIMYILLCGYP 231
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 33/225 (14%)
Query: 4 CISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
C +V+M T VA+K ++ P ++E +++KKL+HE +++L +V+
Sbjct: 196 CFGEVWMGTWNGTTR-VAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 64 GPERDEQGRPDGNKYRGSTYMVFEYMDHD--LTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
Y+V EYM L L G +PQ+ Q+ +G+
Sbjct: 252 -----------------PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 294
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR----VITLWYRPP 177
Y +HRD++ +N+L+ K+ADFGLAR +N T R W P
Sbjct: 295 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPE 351
Query: 178 ELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKI 221
L G ++ D+WS G + EL G+ PG E L ++
Sbjct: 352 AALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 394
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 98/225 (43%), Gaps = 33/225 (14%)
Query: 4 CISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
C +V+M T VA+K ++ P ++E +++KKL+HE +++L +V+
Sbjct: 27 CFGEVWMGTWNGTTR-VAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSEE 82
Query: 64 GPERDEQGRPDGNKYRGSTYMVFEYMDHD--LTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
Y+V EYM+ L L G +PQ+ Q+ +G+
Sbjct: 83 -----------------PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMA 125
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR----VITLWYRPP 177
Y +HRD++ +N+L+ K+ADFGLAR +N T R W P
Sbjct: 126 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPE 182
Query: 178 ELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKI 221
L G ++ D+WS G + EL G+ PG E L ++
Sbjct: 183 AALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 225
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 98/225 (43%), Gaps = 33/225 (14%)
Query: 4 CISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
C +V+M T VA+K ++ P ++E +++KKL+HE +++L +V+
Sbjct: 27 CFGEVWMGTWNGTTR-VAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSEE 82
Query: 64 GPERDEQGRPDGNKYRGSTYMVFEYMDHD--LTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
Y+V EYM+ L L G +PQ+ Q+ +G+
Sbjct: 83 -----------------PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMA 125
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR----VITLWYRPP 177
Y +HRD++ +N+L+ K+ADFGLAR +N T R W P
Sbjct: 126 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLI---EDNEWTARQGAKFPIKWTAPE 182
Query: 178 ELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKI 221
L G ++ D+WS G + EL G+ PG E L ++
Sbjct: 183 AALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 225
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 33/225 (14%)
Query: 4 CISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
C +V+M T VA+K ++ P ++E +++KKL+HE +++L +V+
Sbjct: 196 CFGEVWMGTWNGTTR-VAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 64 GPERDEQGRPDGNKYRGSTYMVFEYMDHD--LTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
Y+V EYM L L G +PQ+ Q+ +G+
Sbjct: 252 -----------------PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 294
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR----VITLWYRPP 177
Y +HRD++ +N+L+ K+ADFGLAR +N T R W P
Sbjct: 295 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPE 351
Query: 178 ELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKI 221
L G ++ D+WS G + EL G+ PG E L ++
Sbjct: 352 AALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 394
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYMDH-DLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 92 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 151
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 152 HLRRIG-RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 211 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 257
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYMDH-DLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 131 HLRRIG-RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 190 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 8/134 (5%)
Query: 79 RGSTYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGS 136
R +V E +D + + DR FT + MK + + Y H + HRD+K
Sbjct: 87 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 146
Query: 137 NLLIDNE---GNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMW 193
NLL ++ LKL DFG A+ + +N+LT T +Y PE +LG KY + DMW
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMW 203
Query: 194 SVGCIFAELLNGKP 207
S+G I LL G P
Sbjct: 204 SLGVIMYILLCGYP 217
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 8/134 (5%)
Query: 79 RGSTYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGS 136
R +V E +D + + DR FT + MK + + Y H + HRD+K
Sbjct: 85 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 144
Query: 137 NLLIDNE---GNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMW 193
NLL ++ LKL DFG A+ + +N+LT T +Y PE +LG KY + DMW
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMW 201
Query: 194 SVGCIFAELLNGKP 207
S+G I LL G P
Sbjct: 202 SLGVIMYILLCGYP 215
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 8/134 (5%)
Query: 79 RGSTYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGS 136
R +V E +D + + DR FT + MK + + Y H + HRD+K
Sbjct: 85 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 144
Query: 137 NLLIDNE---GNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMW 193
NLL ++ LKL DFG A+ + +N+LT T +Y PE +LG KY + DMW
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAKETT--SHNSLTEPCYTPYYVAPE-VLGPEKYDKSCDMW 201
Query: 194 SVGCIFAELLNGKP 207
S+G I LL G P
Sbjct: 202 SLGVIMYILLCGYP 215
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYMDH-DLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 131 HLRRIG-RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 190 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYM-DHDLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS 131
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 132 HLRRIG-RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 191 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 8/134 (5%)
Query: 79 RGSTYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGS 136
R +V E +D + + DR FT + MK + + Y H + HRD+K
Sbjct: 86 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 145
Query: 137 NLLIDNE---GNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMW 193
NLL ++ LKL DFG A+ + +N+LT T +Y PE +LG KY + DMW
Sbjct: 146 NLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMW 202
Query: 194 SVGCIFAELLNGKP 207
S+G I LL G P
Sbjct: 203 SLGVIMYILLCGYP 216
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYM-DHDLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 131 HLRRIG-RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 190 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYM-DHDLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 131 HLRRIG-RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 190 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYMDH-DLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 131 HLRRIG-RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 190 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+K I+ + E I E K++ L HE +++L + T P
Sbjct: 42 VAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGVCTKQRP-------------- 84
Query: 80 GSTYMVFEYMDHD-LTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNL 138
+++ EYM + L RF Q+ K + + Y Q LHRD+ N
Sbjct: 85 --IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNC 142
Query: 139 LIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCI 198
L++++G +K++DFGL+R D + + + PPE+L+ +K+ D+W+ G +
Sbjct: 143 LVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLM-YSKFSSKSDIWAFGVL 201
Query: 199 FAEL 202
E+
Sbjct: 202 MWEI 205
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYMDH-DLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 66 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 125
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 126 HLRRIG-RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 184
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 185 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 231
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYM-DHDLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 64 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS 123
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 124 HLRRIG-RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 182
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 183 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 229
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 33/225 (14%)
Query: 4 CISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
C +V+M T VA+K ++ P ++E +++KKL+HE +++L +V+
Sbjct: 30 CFGEVWMGTWNGTTR-VAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 64 GPERDEQGRPDGNKYRGSTYMVFEYMDHD--LTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
Y+V EYM L L G +PQ+ Q+ +G+
Sbjct: 86 -----------------PIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR----VITLWYRPP 177
Y +HRD++ +N+L+ K+ADFGLAR +N T R W P
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPE 185
Query: 178 ELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKI 221
L G ++ D+WS G + EL G+ PG E L ++
Sbjct: 186 AALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 108 QIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN 167
QI ++++L GL Y H + +HRDIK +N+L+ G +KLADFG+A + D
Sbjct: 105 QIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQIKRNT 163
Query: 168 RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
V T ++ PE ++ + Y D+WS+G EL G+P
Sbjct: 164 FVGTPFWMAPE-VIKQSAYDSKADIWSLGITAIELARGEP 202
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQGR--PDGNKYRGS------TYMVFEYM-DHDLTG 95
+K L + V+KLK+I + +R Q P K S YMV EY ++
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS 131
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF P + Y Q++ Y H +++RD+K NL+ID +G +K+ DFG A+
Sbjct: 132 HLRRIG-RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 191 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYMDH-DLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 131 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
Query: 156 SFSYDHNNTLTNRVITLWYRP----PELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L P PE++L + Y AVD W++G + E+ G P
Sbjct: 190 R--------VKGRTWXLCGTPEALAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+K I+ + E I E K++ L HE +++L + T P
Sbjct: 35 VAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGVCTKQRP-------------- 77
Query: 80 GSTYMVFEYMDHD-LTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNL 138
+++ EYM + L RF Q+ K + + Y Q LHRD+ N
Sbjct: 78 --IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNC 135
Query: 139 LIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCI 198
L++++G +K++DFGL+R D + + + PPE+L+ +K+ D+W+ G +
Sbjct: 136 LVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLM-YSKFSSKSDIWAFGVL 194
Query: 199 FAEL 202
E+
Sbjct: 195 MWEI 198
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 33/225 (14%)
Query: 4 CISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
C +V+M T VA+K ++ P ++E +++KKL+HE +++L +V+
Sbjct: 23 CFGEVWMGTWNGTTR-VAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSEE 78
Query: 64 GPERDEQGRPDGNKYRGSTYMVFEYMDHD--LTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
Y+V EYM L L G +PQ+ Q+ +G+
Sbjct: 79 -----------------PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 121
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR----VITLWYRPP 177
Y +HRD++ +N+L+ K+ADFGLAR +N T R W P
Sbjct: 122 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPE 178
Query: 178 ELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKI 221
L G ++ D+WS G + EL G+ PG E L ++
Sbjct: 179 AALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 221
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 33/225 (14%)
Query: 4 CISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
C +V+M T VA+K ++ P ++E +++KKL+HE +++L +V+
Sbjct: 30 CFGEVWMGTWNGTTR-VAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 64 GPERDEQGRPDGNKYRGSTYMVFEYMDHD--LTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
Y+V EYM L L G +PQ+ Q+ +G+
Sbjct: 86 -----------------PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR----VITLWYRPP 177
Y +HRD++ +N+L+ K+ADFGLAR +N T R W P
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPE 185
Query: 178 ELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKI 221
L G ++ D+WS G + EL G+ PG E L ++
Sbjct: 186 AALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 81/176 (46%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYM-DHDLTG 95
+K L + V+KLK+I + +R Q K + YMV EY ++
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF P + Y Q++ Y H +++RD+K NL+ID +G +K+ DFG A+
Sbjct: 131 HLRRIG-RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 189
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 190 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 33/225 (14%)
Query: 4 CISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
C +V+M T VA+K ++ P ++E +++KKL+HE +++L +V+
Sbjct: 196 CFGEVWMGTWNGTTR-VAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 64 GPERDEQGRPDGNKYRGSTYMVFEYMDHD--LTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
Y+V EYM L L G +PQ+ Q+ +G+
Sbjct: 252 -----------------PIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 294
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR----VITLWYRPP 177
Y +HRD++ +N+L+ K+ADFGLAR +N T R W P
Sbjct: 295 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPE 351
Query: 178 ELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKI 221
L G ++ D+WS G + EL G+ PG E L ++
Sbjct: 352 AALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 394
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYMDH-DLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 131 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + ++ G P
Sbjct: 190 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYQMAAGYP 236
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 108 QIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN 167
QI ++++L GL Y H + +HRDIK +N+L+ G +KLADFG+A + D
Sbjct: 120 QIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQIKRNX 178
Query: 168 RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
V T ++ PE ++ + Y D+WS+G EL G+P
Sbjct: 179 FVGTPFWMAPE-VIKQSAYDSKADIWSLGITAIELARGEP 217
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+K I+ + E I E K++ L HE +++L + T P
Sbjct: 36 VAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGVCTKQRP-------------- 78
Query: 80 GSTYMVFEYMDHD-LTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNL 138
+++ EYM + L RF Q+ K + + Y Q LHRD+ N
Sbjct: 79 --IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNC 136
Query: 139 LIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCI 198
L++++G +K++DFGL+R D + + + PPE+L+ +K+ D+W+ G +
Sbjct: 137 LVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLM-YSKFSSKSDIWAFGVL 195
Query: 199 FAEL 202
E+
Sbjct: 196 MWEI 199
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 33/225 (14%)
Query: 4 CISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
C +V+M T VA+K ++ P ++E +++KKL+HE +++L +V+
Sbjct: 30 CFGEVWMGTWNGTTR-VAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 64 GPERDEQGRPDGNKYRGSTYMVFEYMDHD--LTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
Y+V EYM L L G +PQ+ Q+ +G+
Sbjct: 86 -----------------PIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR----VITLWYRPP 177
Y +HRD++ +N+L+ K+ADFGLAR +N T R W P
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPE 185
Query: 178 ELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKI 221
L G ++ D+WS G + EL G+ PG E L ++
Sbjct: 186 AALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 14/217 (6%)
Query: 10 MAREIKTGEIVALKKIRMDNEKEGFPITAIR-EIKI-LKKLQHENVIKLK-EIVTSPGPE 66
+ R + TG + IR + + + ++ EI + LK+++H N +L IVT P
Sbjct: 10 ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFII 69
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
R D + +M+ +Y++ R RF P K Y ++ L Y H
Sbjct: 70 RMWGTFQDAQQ----IFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK 125
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATK- 185
+++RD+K N+L+D G++K+ DFG A+ + D L T Y PE++ +TK
Sbjct: 126 DIIYRDLKPENILLDKNGHIKITDFGFAK-YVPDVTYXLCG---TPDYIAPEVV--STKP 179
Query: 186 YGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIF 222
Y ++D WS G + E+L G N + KI
Sbjct: 180 YNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKIL 216
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 108 QIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN 167
QI ++++L GL Y H + +HRDIK +N+L+ G +KLADFG+A + D
Sbjct: 125 QIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQIKRNT 183
Query: 168 RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
V T ++ PE ++ + Y D+WS+G EL G+P
Sbjct: 184 FVGTPFWMAPE-VIKQSAYDSKADIWSLGITAIELARGEP 222
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 17/163 (10%)
Query: 41 EIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRP 100
EI IL +++H N+IK+ +I + G + + GS +F ++D P
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEK------HGSGLDLFAFIDR-------HP 125
Query: 101 GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYD 160
R P +QL++ + Y + ++HRDIK N++I + +KL DFG A +
Sbjct: 126 --RLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL--E 181
Query: 161 HNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELL 203
T+ Y PE+L+G GP ++MWS+G L+
Sbjct: 182 RGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 33/208 (15%)
Query: 16 TGEIVALKKIRMD---NEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGR 72
TGE VA+K+ R + +E + + EI+I+KKL H NV+ +E+ P+ ++
Sbjct: 39 TGEQVAIKQCRQELSPKNRERWCL----EIQIMKKLNHPNVVSAREV-----PDGLQKLA 89
Query: 73 PDGNKYRGSTYM----VFEYMDH--DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
P+ Y + +Y++ + GL + P I+ + + + L Y H N
Sbjct: 90 PNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGP--------IRTLLSDISSALRYLHEN 141
Query: 127 QVLHRDIKGSNLLID---NEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
+++HRD+K N+++ K+ D G A+ D T V TL Y PE LL
Sbjct: 142 RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYLAPE-LLEQ 198
Query: 184 TKYGPAVDMWSVGCIFAELLNG-KPILP 210
KY VD WS G + E + G +P LP
Sbjct: 199 KKYTVTVDYWSFGTLAFECITGFRPFLP 226
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 33/208 (15%)
Query: 16 TGEIVALKKIRMD---NEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGR 72
TGE VA+K+ R + +E + + EI+I+KKL H NV+ +E+ P+ ++
Sbjct: 38 TGEQVAIKQCRQELSPKNRERWCL----EIQIMKKLNHPNVVSAREV-----PDGLQKLA 88
Query: 73 PDGNKYRGSTYM----VFEYMDH--DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
P+ Y + +Y++ + GL + P I+ + + + L Y H N
Sbjct: 89 PNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGP--------IRTLLSDISSALRYLHEN 140
Query: 127 QVLHRDIKGSNLLID---NEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
+++HRD+K N+++ K+ D G A+ D T V TL Y PE LL
Sbjct: 141 RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYLAPE-LLEQ 197
Query: 184 TKYGPAVDMWSVGCIFAELLNG-KPILP 210
KY VD WS G + E + G +P LP
Sbjct: 198 KKYTVTVDYWSFGTLAFECITGFRPFLP 225
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 33/225 (14%)
Query: 4 CISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
C +V+M T VA+K ++ P ++E +++KKL+HE +++L +V+
Sbjct: 19 CFGEVWMGTWNGTTR-VAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSEE 74
Query: 64 GPERDEQGRPDGNKYRGSTYMVFEYMDHD--LTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
Y+V EYM L L G +PQ+ Q+ +G+
Sbjct: 75 -----------------PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 117
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR----VITLWYRPP 177
Y +HRD++ +N+L+ K+ADFGLAR +N T R W P
Sbjct: 118 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPE 174
Query: 178 ELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKI 221
L G ++ D+WS G + EL G+ PG E L ++
Sbjct: 175 AALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 217
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 108 QIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN 167
QI ++++L GL Y H + +HRDIK +N+L+ G +KLADFG+A + D
Sbjct: 105 QIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQIKRNX 163
Query: 168 RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
V T ++ PE ++ + Y D+WS+G EL G+P
Sbjct: 164 FVGTPFWMAPE-VIKQSAYDSKADIWSLGITAIELARGEP 202
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 24 KIRMDNEKEGF--PITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGS 81
K+ + + K+G P + E ++K+LQH+ +++L +VT +
Sbjct: 47 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-----------------QEP 89
Query: 82 TYMVFEYMDH-DLTGLADRP-GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y++ EYM++ L P G++ T+ ++ Q+ G+ + +HRD++ +N+L
Sbjct: 90 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 149
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAV---DMWSVG 196
+ + + K+ADFGLAR + + + PE A YG D+WS G
Sbjct: 150 VSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE----AINYGTFTIKSDVWSFG 205
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKI 221
+ E++ G+ PG E + +
Sbjct: 206 ILLTEIVTHGRIPYPGMTNPEVIQNL 231
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 33/225 (14%)
Query: 4 CISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
C +V+M T VA+K ++ P ++E +++KKL+HE +++L +V+
Sbjct: 21 CFGEVWMGTWNGTTR-VAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSEE 76
Query: 64 GPERDEQGRPDGNKYRGSTYMVFEYMDHD--LTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
Y+V EYM L L G +PQ+ Q+ +G+
Sbjct: 77 -----------------PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 119
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR----VITLWYRPP 177
Y +HRD++ +N+L+ K+ADFGLAR +N T R W P
Sbjct: 120 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPE 176
Query: 178 ELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKI 221
L G ++ D+WS G + EL G+ PG E L ++
Sbjct: 177 AALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 219
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYM-DHDLTG 95
+K L + V+KLK+I + +R Q K + YMV EY ++
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NL+ID +G +++ DFG A+
Sbjct: 131 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAK 189
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE++L + Y AVD W++G + E+ G P
Sbjct: 190 R--------VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYMDH-DLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NL+ID +G +++ DFG A+
Sbjct: 131 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAK 189
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y PE+++ + Y AVD W++G + E+ G P
Sbjct: 190 R--------VKGRTWXLCGTPEYLAPEIII-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+K I+ + E I E K++ L HE +++L + T P
Sbjct: 31 VAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGVCTKQRP-------------- 73
Query: 80 GSTYMVFEYMDHD-LTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNL 138
+++ EYM + L RF Q+ K + + Y Q LHRD+ N
Sbjct: 74 --IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNC 131
Query: 139 LIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCI 198
L++++G +K++DFGL+R D + + + PPE+L+ +K+ D+W+ G +
Sbjct: 132 LVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLM-YSKFSSKSDIWAFGVL 190
Query: 199 FAEL 202
E+
Sbjct: 191 MWEI 194
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 24 KIRMDNEKEGF--PITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGS 81
K+ + + K+G P + E ++K+LQH+ +++L +VT +
Sbjct: 45 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-----------------QEP 87
Query: 82 TYMVFEYMDH-DLTGLADRP-GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y++ EYM++ L P G++ T+ ++ Q+ G+ + +HRD++ +N+L
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 147
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAV---DMWSVG 196
+ + + K+ADFGLAR + + + PE A YG D+WS G
Sbjct: 148 VSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE----AINYGTFTIKSDVWSFG 203
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKI 221
+ E++ G+ PG E + +
Sbjct: 204 ILLTEIVTHGRIPYPGMTNPEVIQNL 229
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 97/225 (43%), Gaps = 33/225 (14%)
Query: 4 CISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
C +V+M T VA+K ++ P ++E +++KK++HE +++L +V+
Sbjct: 30 CFGEVWMGTWNGTTR-VAIKTLKPGTMS---PEAFLQEAQVMKKIRHEKLVQLYAVVSEE 85
Query: 64 GPERDEQGRPDGNKYRGSTYMVFEYMDHD--LTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
Y+V EYM L L G +PQ+ Q+ +G+
Sbjct: 86 -----------------PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR----VITLWYRPP 177
Y +HRD++ +N+L+ K+ADFGLAR +N T R W P
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPE 185
Query: 178 ELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKI 221
L G ++ D+WS G + EL G+ PG E L ++
Sbjct: 186 AALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 20/167 (11%)
Query: 41 EIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADR 99
E I+ + H N+I+L+ +VT P +V EYM++ L +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKP----------------VMIVTEYMENGSLDSFLRK 139
Query: 100 PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSY 159
+FTV Q+ ++ + +G+ Y +HRD+ N+LI++ K++DFGLAR
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLED 199
Query: 160 DHNNTLTNR--VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN 204
D T R I + + PE + K+ A D+WS G + E+++
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 24 KIRMDNEKEGF--PITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGS 81
K+ + + K+G P + E ++K+LQH+ +++L +VT +
Sbjct: 48 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-----------------QEP 90
Query: 82 TYMVFEYMDH-DLTGLADRP-GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y++ EYM++ L P G++ T+ ++ Q+ G+ + +HRD++ +N+L
Sbjct: 91 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 150
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAV---DMWSVG 196
+ + + K+ADFGLAR + + + PE A YG D+WS G
Sbjct: 151 VSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE----AINYGTFTIKSDVWSFG 206
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKI 221
+ E++ G+ PG E + +
Sbjct: 207 ILLTEIVTHGRIPYPGMTNPEVIQNL 232
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+K I+ + E I E K++ L HE +++L + T P
Sbjct: 36 VAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGVCTKQRP-------------- 78
Query: 80 GSTYMVFEYMDHD-LTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNL 138
+++ EYM + L RF Q+ K + + Y Q LHRD+ N
Sbjct: 79 --IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNC 136
Query: 139 LIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCI 198
L++++G +K++DFGL+R D + + + PPE+L+ +K+ D+W+ G +
Sbjct: 137 LVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLM-YSKFSSKSDIWAFGVL 195
Query: 199 FAEL 202
E+
Sbjct: 196 MWEI 199
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 24 KIRMDNEKEGF--PITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGS 81
K+ + + K+G P + E ++K+LQH+ +++L +VT +
Sbjct: 49 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-----------------QEP 91
Query: 82 TYMVFEYMDH-DLTGLADRP-GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y++ EYM++ L P G++ T+ ++ Q+ G+ + +HRD++ +N+L
Sbjct: 92 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 151
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAV---DMWSVG 196
+ + + K+ADFGLAR + + + PE A YG D+WS G
Sbjct: 152 VSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE----AINYGTFTIKSDVWSFG 207
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKI 221
+ E++ G+ PG E + +
Sbjct: 208 ILLTEIVTHGRIPYPGMTNPEVIQNL 233
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 110/251 (43%), Gaps = 39/251 (15%)
Query: 77 KYRGSTYMVFEYMDHDLTGLADRPG-LRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKG 135
++ G +VFE + G L F + I+ Q+ +++ H N++ H D+K
Sbjct: 87 EHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKP 146
Query: 136 SNLLIDNEG-------------------NLKLADFGLARSFSYDHNNTLTNRVITLWYRP 176
N+L ++K+ DFG A ++ +H++TL V T YR
Sbjct: 147 ENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA-TYDDEHHSTL---VSTRHYRA 202
Query: 177 PELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGV 236
PE++L A + D+WS+GCI E G + P + E L+ + + G + +
Sbjct: 203 PEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKT 261
Query: 237 SKMPAYNHFK--------PSRTMKRR---VREVFRHFD---RHALELLEKMLMLDPSQRI 282
K ++H + R + R ++E D +L++KML DP++RI
Sbjct: 262 RKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRI 321
Query: 283 SAKDALDSEYF 293
+ ++AL +F
Sbjct: 322 TLREALKHPFF 332
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 45 LKKLQHENVIKLKEIVTSPGPERDEQG--------RPDGNKYRGSTYMVFEYMDH-DLTG 95
+K L + V+KLK+I + +R Q K + YMV EY+ ++
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLAR 155
R G RF+ P + Y Q++ Y H +++RD+K NLLID +G +++ DFG A+
Sbjct: 131 HLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
Query: 156 SFSYDHNNTLTNRVITLW----YRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
+ R L Y P ++L + Y AVD W++G + E+ G P
Sbjct: 190 R--------VKGRTWXLCGTPEYLAPAIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 28/190 (14%)
Query: 39 IREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHD--LTGL 96
+ E ++K LQH+ +++L +VT P Y++ E+M L L
Sbjct: 55 LEEANLMKTLQHDKLVRLYAVVTKEEP----------------IYIITEFMAKGSLLDFL 98
Query: 97 ADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARS 156
G + +P++ + Q+ G+ Y +HRD++ +N+L+ K+ADFGLAR
Sbjct: 99 KSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARV 158
Query: 157 FSYDHNNTLTNR----VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPG 211
+N T R W P + G + ++WS G + E++ GK PG
Sbjct: 159 I---EDNEYTAREGAKFPIKWTAPEAINFGC--FTIKSNVWSFGILLYEIVTYGKIPYPG 213
Query: 212 KNEAEQLSKI 221
+ A+ +S +
Sbjct: 214 RTNADVMSAL 223
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 96/225 (42%), Gaps = 33/225 (14%)
Query: 4 CISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
C +V+M T VA+K ++ P ++E +++KKL+HE +++L +V+
Sbjct: 30 CFGEVWMGTWNGTTR-VAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 64 GPERDEQGRPDGNKYRGSTYMVFEYMDHD--LTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
Y+V EYM L L G +PQ+ Q+ +G+
Sbjct: 86 -----------------PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR----VITLWYRPP 177
Y +HRD+ +N+L+ K+ADFGLAR +N T R W P
Sbjct: 129 YVERMNYVHRDLAAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPE 185
Query: 178 ELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKI 221
L G ++ D+WS G + EL G+ PG E L ++
Sbjct: 186 AALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 24 KIRMDNEKEGF--PITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGS 81
K+ + + K+G P + E ++K+LQH+ +++L +VT +
Sbjct: 39 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-----------------QEP 81
Query: 82 TYMVFEYMDH-DLTGLADRP-GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y++ EYM++ L P G++ T+ ++ Q+ G+ + +HRD++ +N+L
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAV---DMWSVG 196
+ + + K+ADFGLAR + + + PE A YG D+WS G
Sbjct: 142 VSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE----AINYGTFTIKSDVWSFG 197
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKI 221
+ E++ G+ PG E + +
Sbjct: 198 ILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 113/267 (42%), Gaps = 60/267 (22%)
Query: 38 AIREIKILKKLQ-HENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGL 96
++E+ IL+K+ H N+I+LK D + ++VF+ M L
Sbjct: 70 TLKEVDILRKVSGHPNIIQLK----------------DTYETNTFFFLVFDLMKKG--EL 111
Query: 97 ADRPGLRFTVPQ--IKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLA 154
D + T+ + + M+ LL + H ++HRD+K N+L+D++ N+KL DFG
Sbjct: 112 FDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGF- 170
Query: 155 RSFSYDHNNTLTNRVITLWYRPPELLLGATK-----YGPAVDMWSVGCIFAELLNGKPIL 209
S D L + T Y PE++ + YG VDMWS G I LL G P
Sbjct: 171 -SCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
Query: 210 PGKNEAEQLSKIFE---LCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHA 266
+ + L I GSP+ W S T+K
Sbjct: 230 WHRKQMLMLRMIMSGNYQFGSPE---WDDYSD-----------TVK-------------- 261
Query: 267 LELLEKMLMLDPSQRISAKDALDSEYF 293
+L+ + L++ P +R +A++AL +F
Sbjct: 262 -DLVSRFLVVQPQKRYTAEEALAHPFF 287
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 24 KIRMDNEKEGF--PITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGS 81
K+ + + K+G P + E ++K+LQH+ +++L +VT +
Sbjct: 41 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-----------------QEP 83
Query: 82 TYMVFEYMDH-DLTGLADRP-GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y++ EYM++ L P G++ T+ ++ Q+ G+ + +HRD++ +N+L
Sbjct: 84 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 143
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAV---DMWSVG 196
+ + + K+ADFGLAR + + + PE A YG D+WS G
Sbjct: 144 VSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE----AINYGTFTIKSDVWSFG 199
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKI 221
+ E++ G+ PG E + +
Sbjct: 200 ILLTEIVTHGRIPYPGMTNPEVIQNL 225
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 89/196 (45%), Gaps = 25/196 (12%)
Query: 12 REIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQG 71
REI I LK D ++ F + E I+ + H N+I L+ +VT P
Sbjct: 56 REICVA-IKTLKAGYTDKQRRDF----LSEASIMGQFDHPNIIHLEGVVTKCKP------ 104
Query: 72 RPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLH 130
++ EYM++ L + RFTV Q+ ++ + +G+ Y +H
Sbjct: 105 ----------VMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAVH 154
Query: 131 RDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR--VITLWYRPPELLLGATKYGP 188
RD+ N+L+++ K++DFG++R D T R I + + PE + K+
Sbjct: 155 RDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE-AIAYRKFTS 213
Query: 189 AVDMWSVGCIFAELLN 204
A D+WS G + E+++
Sbjct: 214 ASDVWSYGIVMWEVMS 229
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 20/167 (11%)
Query: 41 EIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADR 99
E I+ + H N+I+L+ +VT P +V EYM++ L +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKP----------------VMIVTEYMENGSLDSFLRK 139
Query: 100 PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSY 159
+FTV Q+ ++ + +G+ Y +HRD+ N+LI++ K++DFGL+R
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 160 DHNNTLTNR--VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN 204
D T R I + + PE + K+ A D+WS G + E+++
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 112/267 (41%), Gaps = 60/267 (22%)
Query: 38 AIREIKILKKLQ-HENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGL 96
++E+ IL+K+ H N+I+LK D + ++VF+ M L
Sbjct: 70 TLKEVDILRKVSGHPNIIQLK----------------DTYETNTFFFLVFDLMKKG--EL 111
Query: 97 ADRPGLRFTVPQ--IKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLA 154
D + T+ + + M+ LL + H ++HRD+K N+L+D++ N+KL DFG
Sbjct: 112 FDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGF- 170
Query: 155 RSFSYDHNNTLTNRVITLWYRPPELLLGATK-----YGPAVDMWSVGCIFAELLNGKPIL 209
S D L T Y PE++ + YG VDMWS G I LL G P
Sbjct: 171 -SCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
Query: 210 PGKNEAEQLSKIFE---LCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHA 266
+ + L I GSP+ W S T+K
Sbjct: 230 WHRKQMLMLRMIMSGNYQFGSPE---WDDYSD-----------TVK-------------- 261
Query: 267 LELLEKMLMLDPSQRISAKDALDSEYF 293
+L+ + L++ P +R +A++AL +F
Sbjct: 262 -DLVSRFLVVQPQKRYTAEEALAHPFF 287
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 109 IKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR 168
I ++++L GL Y H + +HRDIK +N+L+ +G++KLADFG+A + D
Sbjct: 118 IATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLT-DTQIKRNXF 176
Query: 169 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
V T ++ PE ++ + Y D+WS+G EL G+P
Sbjct: 177 VGTPFWMAPE-VIKQSAYDFKADIWSLGITAIELAKGEP 214
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 24 KIRMDNEKEGF--PITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGS 81
K+ + + K+G P + E ++K+LQH+ +++L +VT +
Sbjct: 40 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-----------------QEP 82
Query: 82 TYMVFEYMDH-DLTGLADRP-GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y++ EYM++ L P G++ T+ ++ Q+ G+ + +HRD++ +N+L
Sbjct: 83 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 142
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAV---DMWSVG 196
+ + + K+ADFGLAR + + + PE A YG D+WS G
Sbjct: 143 VSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE----AINYGTFTIKSDVWSFG 198
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKI 221
+ E++ G+ PG E + +
Sbjct: 199 ILLTEIVTHGRIPYPGMTNPEVIQNL 224
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 24 KIRMDNEKEGF--PITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGS 81
K+ + + K+G P + E ++K+LQH+ +++L +VT +
Sbjct: 39 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-----------------QEP 81
Query: 82 TYMVFEYMDH-DLTGLADRP-GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y++ EYM++ L P G++ T+ ++ Q+ G+ + +HRD++ +N+L
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAV---DMWSVG 196
+ + + K+ADFGLAR + + PE A YG D+WS G
Sbjct: 142 VSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPE----AINYGTFTIKSDVWSFG 197
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKI 221
+ E++ G+ PG E + +
Sbjct: 198 ILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 24 KIRMDNEKEGF--PITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGS 81
K+ + + K+G P + E ++K+LQH+ +++L +VT +
Sbjct: 45 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-----------------QEP 87
Query: 82 TYMVFEYMDH-DLTGLADRP-GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y++ EYM++ L P G++ T+ ++ Q+ G+ + +HRD++ +N+L
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 147
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAV---DMWSVG 196
+ + + K+ADFGLAR + + + PE A YG D+WS G
Sbjct: 148 VSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE----AINYGTFTIKSDVWSFG 203
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKI 221
+ E++ G+ PG E + +
Sbjct: 204 ILLTEIVTHGRIPYPGMTNPEVIQNL 229
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 24 KIRMDNEKEGF--PITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGS 81
K+ + + K+G P + E ++K+LQH+ +++L +VT +
Sbjct: 44 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-----------------QEP 86
Query: 82 TYMVFEYMDH-DLTGLADRP-GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y++ EYM++ L P G++ T+ ++ Q+ G+ + +HRD++ +N+L
Sbjct: 87 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 146
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAV---DMWSVG 196
+ + + K+ADFGLAR + + + PE A YG D+WS G
Sbjct: 147 VSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE----AINYGTFTIKSDVWSFG 202
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKI 221
+ E++ G+ PG E + +
Sbjct: 203 ILLTEIVTHGRIPYPGMTNPEVIQNL 228
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 24 KIRMDNEKEGF--PITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGS 81
K+ + + K+G P + E ++K+LQH+ +++L +VT +
Sbjct: 39 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-----------------QEP 81
Query: 82 TYMVFEYMDH-DLTGLADRP-GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y++ EYM++ L P G++ T+ ++ Q+ G+ + +HRD++ +N+L
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAV---DMWSVG 196
+ + + K+ADFGLAR + + + PE A YG D+WS G
Sbjct: 142 VSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE----AINYGTFTIKSDVWSFG 197
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKI 221
+ E++ G+ PG E + +
Sbjct: 198 ILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 33/214 (15%)
Query: 4 CISQVFMAREIKTGEIVALKK-IRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTS 62
C Q +TGE++ +K+ IR D E + T ++E+K+++ L+H NV+K ++
Sbjct: 22 CFGQAIKVTHRETGEVMVMKELIRFDEETQR---TFLKEVKVMRCLEHPNVLKFIGVLY- 77
Query: 63 PGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHY 122
+D++ +G T L G+ ++ Q + K + +G+ Y
Sbjct: 78 ----KDKRLNFITEYIKGGT----------LRGIIKSMDSQYPWSQRVSFAKDIASGMAY 123
Query: 123 CHVNQVLHRDIKGSNLLIDNEGNLKLADFGLA-------------RSFSYDHNNTLTNRV 169
H ++HRD+ N L+ N+ +ADFGLA RS V
Sbjct: 124 LHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVV 183
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELL 203
++ PE++ G + Y VD++S G + E++
Sbjct: 184 GNPYWMAPEMINGRS-YDEKVDVFSFGIVLCEII 216
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 20/167 (11%)
Query: 41 EIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADR 99
E I+ + H N+I+L+ +VT P +V EYM++ L +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKP----------------VMIVTEYMENGSLDSFLRK 139
Query: 100 PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSY 159
+FTV Q+ ++ + +G+ Y +HRD+ N+LI++ K++DFGL+R
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 160 DHNNTLTNR--VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN 204
D T R I + + PE + K+ A D+WS G + E+++
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 20/167 (11%)
Query: 41 EIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADR 99
E I+ + H N+I+L+ +VT P +V EYM++ L +
Sbjct: 84 EASIMGQFDHPNIIRLEGVVTKSKP----------------VMIVTEYMENGSLDSFLRK 127
Query: 100 PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSY 159
+FTV Q+ ++ + +G+ Y +HRD+ N+LI++ K++DFGL+R
Sbjct: 128 HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 187
Query: 160 DHNNTLTNR--VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN 204
D T R I + + PE + K+ A D+WS G + E+++
Sbjct: 188 DPEAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 20/167 (11%)
Query: 41 EIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADR 99
E I+ + H N+I+L+ +VT P +V EYM++ L +
Sbjct: 94 EASIMGQFDHPNIIRLEGVVTKSKP----------------VMIVTEYMENGSLDSFLRK 137
Query: 100 PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSY 159
+FTV Q+ ++ + +G+ Y +HRD+ N+LI++ K++DFGL+R
Sbjct: 138 HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 197
Query: 160 DHNNTLTNR--VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN 204
D T R I + + PE + K+ A D+WS G + E+++
Sbjct: 198 DPEAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 20/167 (11%)
Query: 41 EIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADR 99
E I+ + H N+I+L+ +VT P +V EYM++ L +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKP----------------VMIVTEYMENGSLDSFLRK 139
Query: 100 PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSY 159
+FTV Q+ ++ + +G+ Y +HRD+ N+LI++ K++DFGL+R
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 160 DHNNTLTNR--VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN 204
D T R I + + PE + K+ A D+WS G + E+++
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 20/167 (11%)
Query: 41 EIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADR 99
E I+ + H N+I+L+ +VT P +V EYM++ L +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKP----------------VMIVTEYMENGSLDSFLRK 139
Query: 100 PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSY 159
+FTV Q+ ++ + +G+ Y +HRD+ N+LI++ K++DFGL+R
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 160 DHNNTLTNR--VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN 204
D T R I + + PE + K+ A D+WS G + E+++
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 20/167 (11%)
Query: 41 EIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADR 99
E I+ + H N+I+L+ +VT P +V EYM++ L +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKP----------------VMIVTEYMENGSLDSFLRK 139
Query: 100 PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSY 159
+FTV Q+ ++ + +G+ Y +HRD+ N+LI++ K++DFGL+R
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 160 DHNNTLTNR--VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN 204
D T R I + + PE + K+ A D+WS G + E+++
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 114/294 (38%), Gaps = 57/294 (19%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIR-EIKILKKLQHENVIKLKEIVTSPGPE 66
V + E +G +K I D + P+ I EI++LK L H N+IK+ E+
Sbjct: 38 VHLVEERSSGLERVIKTINKDRSQ--VPMEQIEAEIEVLKSLDHPNIIKIFEVFED---- 91
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMD----HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHY 122
+ Y+V E + + A G + + MKQ++ L Y
Sbjct: 92 ------------YHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAY 139
Query: 123 CHVNQVLHRDIKGSNLLIDN---EGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPEL 179
H V+H+D+K N+L + +K+ DFGLA F D ++ TN T Y PE+
Sbjct: 140 FHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS--TNAAGTALYMAPEV 197
Query: 180 LLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKM 239
+ D+WS G + LL G G S +E K
Sbjct: 198 FKRDVTF--KCDIWSAGVVMYFLLTGCLPFTGT--------------SLEEVQQKATYKE 241
Query: 240 PAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
P Y R A++LL++ML DP +R SA L E+F
Sbjct: 242 PNYA-------------VECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWF 282
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 20/167 (11%)
Query: 41 EIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADR 99
E I+ + H N+I+L+ +VT P +V EYM++ L +
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKP----------------VMIVTEYMENGSLDSFLRK 110
Query: 100 PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSY 159
+FTV Q+ ++ + +G+ Y +HRD+ N+LI++ K++DFGL+R
Sbjct: 111 HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 170
Query: 160 DHNNTLTNR--VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN 204
D T R I + + PE + K+ A D+WS G + E+++
Sbjct: 171 DPEAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 24 KIRMDNEKEGF--PITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGS 81
K+ + + K+G P + E ++K+LQH+ +++L +VT +
Sbjct: 39 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-----------------QEP 81
Query: 82 TYMVFEYMDH-DLTGLADRP-GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y++ EYM++ L P G++ T+ ++ Q+ G+ + +HRD++ +N+L
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAV---DMWSVG 196
+ + + K+ADFGLAR + + + PE A YG D+WS G
Sbjct: 142 VSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE----AINYGTFTIKSDVWSFG 197
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKI 221
+ E++ G+ PG E + +
Sbjct: 198 ILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 89/196 (45%), Gaps = 25/196 (12%)
Query: 12 REIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQG 71
REI I LK D ++ F + E I+ + H N+I L+ +VT P
Sbjct: 41 REICVA-IKTLKAGYTDKQRRDF----LSEASIMGQFDHPNIIHLEGVVTKCKP------ 89
Query: 72 RPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLH 130
++ EYM++ L + RFTV Q+ ++ + +G+ Y +H
Sbjct: 90 ----------VMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVH 139
Query: 131 RDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR--VITLWYRPPELLLGATKYGP 188
RD+ N+L+++ K++DFG++R D T R I + + PE + K+
Sbjct: 140 RDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE-AIAYRKFTS 198
Query: 189 AVDMWSVGCIFAELLN 204
A D+WS G + E+++
Sbjct: 199 ASDVWSYGIVMWEVMS 214
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 112/267 (41%), Gaps = 60/267 (22%)
Query: 38 AIREIKILKKLQ-HENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGL 96
++E+ IL+K+ H N+I+LK D + ++VF+ M L
Sbjct: 57 TLKEVDILRKVSGHPNIIQLK----------------DTYETNTFFFLVFDLMKKG--EL 98
Query: 97 ADRPGLRFTVPQ--IKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLA 154
D + T+ + + M+ LL + H ++HRD+K N+L+D++ N+KL DFG
Sbjct: 99 FDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGF- 157
Query: 155 RSFSYDHNNTLTNRVITLWYRPPELLLGATK-----YGPAVDMWSVGCIFAELLNGKPIL 209
S D L T Y PE++ + YG VDMWS G I LL G P
Sbjct: 158 -SCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
Query: 210 PGKNEAEQLSKIFE---LCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHA 266
+ + L I GSP+ W S T+K
Sbjct: 217 WHRKQMLMLRMIMSGNYQFGSPE---WDDYSD-----------TVK-------------- 248
Query: 267 LELLEKMLMLDPSQRISAKDALDSEYF 293
+L+ + L++ P +R +A++AL +F
Sbjct: 249 -DLVSRFLVVQPQKRYTAEEALAHPFF 274
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 95/212 (44%), Gaps = 25/212 (11%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLK--EIVTSPG 64
QV+ R +KTG++ A+K + + ++E +EI +LKK H I +
Sbjct: 39 QVYKGRHVKTGQLAAIKVMDVTGDEEE---EIKQEINMLKKYSHHRNIATYYGAFIKKNP 95
Query: 65 PERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLA-DRPGLRFTVPQIKCYMKQLLTGLHY 122
P D+Q ++V E+ +T L + G I +++L GL +
Sbjct: 96 PGMDDQ-----------LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSH 144
Query: 123 CHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPPELLL 181
H ++V+HRDIKG N+L+ +KL DFG+ S D N I T ++ PE++
Sbjct: 145 LHQHKVIHRDIKGQNVLLTENAEVKLVDFGV--SAQLDRTVGRRNTFIGTPYWMAPEVIA 202
Query: 182 G----ATKYGPAVDMWSVGCIFAELLNGKPIL 209
Y D+WS+G E+ G P L
Sbjct: 203 CDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 20/167 (11%)
Query: 41 EIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADR 99
E I+ + H N+I+L+ +VT P +V EYM++ L +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKP----------------VMIVTEYMENGSLDSFLRK 139
Query: 100 PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSY 159
+FTV Q+ ++ + +G+ Y +HRD+ N+LI++ K++DFGL R
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLED 199
Query: 160 DHNNTLTNR--VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN 204
D T R I + + PE + K+ A D+WS G + E+++
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 24 KIRMDNEKEGF--PITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGS 81
K+ + + K+G P + E ++K+LQH+ +++L +VT +
Sbjct: 34 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-----------------QEP 76
Query: 82 TYMVFEYMDH-DLTGLADRP-GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y++ EYM++ L P G++ T+ ++ Q+ G+ + +HRD++ +N+L
Sbjct: 77 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 136
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAV---DMWSVG 196
+ + + K+ADFGLAR + + + PE A YG D+WS G
Sbjct: 137 VSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE----AINYGTFTIKSDVWSFG 192
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKI 221
+ E++ G+ PG E + +
Sbjct: 193 ILLTEIVTHGRIPYPGMTNPEVIQNL 218
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 107/255 (41%), Gaps = 53/255 (20%)
Query: 40 REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMD--HDLTGLA 97
RE+ IL+++ H NVI L ++ + R ++ E + LA
Sbjct: 64 REVSILRQVLHHNVITLHDVYEN----------------RTDVVLILELVSGGELFDFLA 107
Query: 98 DRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG----NLKLADFGL 153
+ L + + ++KQ+L G++Y H ++ H D+K N+++ ++ ++KL DFGL
Sbjct: 108 QKESL--SEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 154 ARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKN 213
A + N T + PE++ G DMWS+G I LL+G G
Sbjct: 166 AHEI--EDGVEFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDT 222
Query: 214 EAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKM 273
+ E L+ I + DE E F H A + + K+
Sbjct: 223 KQETLANITSVSYDFDE--------------------------EFFSHTSELAKDFIRKL 256
Query: 274 LMLDPSQRISAKDAL 288
L+ + +R++ ++AL
Sbjct: 257 LVKETRKRLTIQEAL 271
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 23/201 (11%)
Query: 112 YMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVIT 171
Y ++ GL H ++++RD+K N+L+D+ G+++++D GLA T+ RV T
Sbjct: 291 YAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRVGT 348
Query: 172 LWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILP------GKNEAEQLSKIFELC 225
+ Y PE ++ +Y + D W++GC+ E++ G+ + E E+L K E+
Sbjct: 349 VGYMAPE-VVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK--EVP 405
Query: 226 GSPDETIWPGVSKMPAYNHFK-PSRTMKRR---VREVFRH-------FDRHALELLEKML 274
E P + + K P+ + R REV H F R +LE
Sbjct: 406 EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPF 465
Query: 275 MLDPSQRISAKDALDSEYFWT 295
DP Q I KD LD E F T
Sbjct: 466 KPDP-QAIYCKDVLDIEQFST 485
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 109/251 (43%), Gaps = 39/251 (15%)
Query: 77 KYRGSTYMVFEYMDHDLTGLADRPG-LRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKG 135
++ G +VFE + G L F + I+ Q+ +++ H N++ H D+K
Sbjct: 87 EHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKP 146
Query: 136 SNLLIDNEG-------------------NLKLADFGLARSFSYDHNNTLTNRVITLWYRP 176
N+L ++K+ DFG A ++ +H++TL V YR
Sbjct: 147 ENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA-TYDDEHHSTL---VXXRHYRA 202
Query: 177 PELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGV 236
PE++L A + D+WS+GCI E G + P + E L+ + + G + +
Sbjct: 203 PEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKT 261
Query: 237 SKMPAYNHFK--------PSRTMKRR---VREVFRHFD---RHALELLEKMLMLDPSQRI 282
K ++H + R + R ++E D +L++KML DP++RI
Sbjct: 262 RKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRI 321
Query: 283 SAKDALDSEYF 293
+ ++AL +F
Sbjct: 322 TLREALKHPFF 332
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 89/196 (45%), Gaps = 25/196 (12%)
Query: 12 REIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQG 71
REI I LK D ++ F + E I+ + H N+I L+ +VT P
Sbjct: 35 REICVA-IKTLKAGYTDKQRRDF----LSEASIMGQFDHPNIIHLEGVVTKCKP------ 83
Query: 72 RPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLH 130
++ EYM++ L + RFTV Q+ ++ + +G+ Y +H
Sbjct: 84 ----------VMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVH 133
Query: 131 RDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR--VITLWYRPPELLLGATKYGP 188
RD+ N+L+++ K++DFG++R D T R I + + PE + K+
Sbjct: 134 RDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE-AIAYRKFTS 192
Query: 189 AVDMWSVGCIFAELLN 204
A D+WS G + E+++
Sbjct: 193 ASDVWSYGIVMWEVMS 208
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 107/255 (41%), Gaps = 53/255 (20%)
Query: 40 REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMD--HDLTGLA 97
RE+ IL+++ H NVI L ++ + R ++ E + LA
Sbjct: 64 REVSILRQVLHHNVITLHDVYEN----------------RTDVVLILELVSGGELFDFLA 107
Query: 98 DRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG----NLKLADFGL 153
+ L + + ++KQ+L G++Y H ++ H D+K N+++ ++ ++KL DFGL
Sbjct: 108 QKESL--SEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 154 ARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKN 213
A + N T + PE++ G DMWS+G I LL+G G
Sbjct: 166 AHEI--EDGVEFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDT 222
Query: 214 EAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKM 273
+ E L+ I + DE E F H A + + K+
Sbjct: 223 KQETLANITSVSYDFDE--------------------------EFFSHTSELAKDFIRKL 256
Query: 274 LMLDPSQRISAKDAL 288
L+ + +R++ ++AL
Sbjct: 257 LVKETRKRLTIQEAL 271
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 23/201 (11%)
Query: 112 YMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVIT 171
Y ++ GL H ++++RD+K N+L+D+ G+++++D GLA T+ RV T
Sbjct: 291 YAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRVGT 348
Query: 172 LWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILP------GKNEAEQLSKIFELC 225
+ Y PE ++ +Y + D W++GC+ E++ G+ + E E+L K E+
Sbjct: 349 VGYMAPE-VVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK--EVP 405
Query: 226 GSPDETIWPGVSKMPAYNHFK-PSRTMKRR---VREVFRH-------FDRHALELLEKML 274
E P + + K P+ + R REV H F R +LE
Sbjct: 406 EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPF 465
Query: 275 MLDPSQRISAKDALDSEYFWT 295
DP Q I KD LD E F T
Sbjct: 466 KPDP-QAIYCKDVLDIEQFST 485
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 108/256 (42%), Gaps = 56/256 (21%)
Query: 40 REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTG---L 96
RE +I +KLQH N+++L D + Y+VF+ +TG
Sbjct: 77 REARICRKLQHPNIVRLH----------------DSIQEESFHYLVFDL----VTGGELF 116
Query: 97 ADRPGLRF-TVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGN---LKLADFG 152
D F + ++Q+L + YCH N ++HR++K NLL+ ++ +KLADFG
Sbjct: 117 EDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFG 176
Query: 153 LARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGK 212
LA + + T Y PE +L Y VD+W+ G I LL G P +
Sbjct: 177 LA--IEVNDSEAWHGFAGTPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWDE 233
Query: 213 NEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEK 272
++ ++I K AY++ P + A L++
Sbjct: 234 DQHRLYAQI----------------KAGAYDYPSPE----------WDTVTPEAKSLIDS 267
Query: 273 MLMLDPSQRISAKDAL 288
ML ++P +RI+A AL
Sbjct: 268 MLTVNPKKRITADQAL 283
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 107/255 (41%), Gaps = 53/255 (20%)
Query: 40 REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMD--HDLTGLA 97
RE+ IL+++ H NVI L ++ + R ++ E + LA
Sbjct: 64 REVSILRQVLHHNVITLHDVYEN----------------RTDVVLILELVSGGELFDFLA 107
Query: 98 DRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG----NLKLADFGL 153
+ L + + ++KQ+L G++Y H ++ H D+K N+++ ++ ++KL DFGL
Sbjct: 108 QKESL--SEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 154 ARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKN 213
A + N T + PE++ G DMWS+G I LL+G G
Sbjct: 166 AHEI--EDGVEFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDT 222
Query: 214 EAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKM 273
+ E L+ I + DE E F H A + + K+
Sbjct: 223 KQETLANITSVSYDFDE--------------------------EFFSHTSELAKDFIRKL 256
Query: 274 LMLDPSQRISAKDAL 288
L+ + +R++ ++AL
Sbjct: 257 LVKETRKRLTIQEAL 271
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 30/231 (12%)
Query: 40 REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMD--HDLTGLA 97
RE+ IL+++ H NVI L ++ + R ++ E + LA
Sbjct: 64 REVSILRQVLHHNVITLHDVYEN----------------RTDVVLILELVSGGELFDFLA 107
Query: 98 DRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG----NLKLADFGL 153
+ L + + ++KQ+L G++Y H ++ H D+K N+++ ++ ++KL DFGL
Sbjct: 108 QKESL--SEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 154 ARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKN 213
A + N T + PE ++ G DMWS+G I LL+G G
Sbjct: 166 AHEI--EDGVEFKNIFGTPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 222
Query: 214 EAEQLSKIFELCGSPDETIWPGVSKMPA--YNHFKPSRTMKR-RVREVFRH 261
+ E L+ I + DE + S++ T KR ++E RH
Sbjct: 223 KQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 108/256 (42%), Gaps = 56/256 (21%)
Query: 40 REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTG---L 96
RE +I +KLQH N+++L D + Y+VF+ + TG
Sbjct: 53 REARICRKLQHPNIVRLH----------------DSIQEESFHYLVFDLV----TGGELF 92
Query: 97 ADRPGLRF-TVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGN---LKLADFG 152
D F + ++Q+L + YCH N ++HR++K NLL+ ++ +KLADFG
Sbjct: 93 EDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFG 152
Query: 153 LARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGK 212
LA + + T Y PE +L Y VD+W+ G I LL G P +
Sbjct: 153 LA--IEVNDSEAWHGFAGTPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWDE 209
Query: 213 NEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEK 272
++ ++I K AY++ P + A L++
Sbjct: 210 DQHRLYAQI----------------KAGAYDYPSPE----------WDTVTPEAKSLIDS 243
Query: 273 MLMLDPSQRISAKDAL 288
ML ++P +RI+A AL
Sbjct: 244 MLTVNPKKRITADQAL 259
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 69/160 (43%), Gaps = 14/160 (8%)
Query: 83 YMVFEYM-DHDLTGLADRPGLRFTVPQ--IKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
YMV EYM DL L + VP+ K Y +++ L H ++HRD+K N+L
Sbjct: 151 YMVMEYMPGGDLVNLMSN----YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNML 206
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLL---GATKYGPAVDMWSVG 196
+D G+LKLADFG V T Y PE+L G YG D WSVG
Sbjct: 207 LDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG 266
Query: 197 CIFAELLNGKPILPGKNEAEQLSKIFE----LCGSPDETI 232
E+L G + SKI + LC D I
Sbjct: 267 VFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEI 306
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 108/256 (42%), Gaps = 56/256 (21%)
Query: 40 REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTG---L 96
RE +I +KLQH N+++L D + Y+VF+ + TG
Sbjct: 54 REARICRKLQHPNIVRLH----------------DSIQEESFHYLVFDLV----TGGELF 93
Query: 97 ADRPGLRFTVPQIKCY-MKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGN---LKLADFG 152
D F + ++Q+L + YCH N ++HR++K NLL+ ++ +KLADFG
Sbjct: 94 EDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFG 153
Query: 153 LARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGK 212
LA + + T Y PE +L Y VD+W+ G I LL G P +
Sbjct: 154 LA--IEVNDSEAWHGFAGTPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWDE 210
Query: 213 NEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEK 272
++ ++I K AY++ P + A L++
Sbjct: 211 DQHRLYAQI----------------KAGAYDYPSPE----------WDTVTPEAKSLIDS 244
Query: 273 MLMLDPSQRISAKDAL 288
ML ++P +RI+A AL
Sbjct: 245 MLTVNPKKRITADQAL 260
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 96/225 (42%), Gaps = 33/225 (14%)
Query: 4 CISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSP 63
C +V+M T VA+K ++ P ++E +++KKL+HE +++L +V+
Sbjct: 20 CFGEVWMGTWNGTTR-VAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSEE 75
Query: 64 GPERDEQGRPDGNKYRGSTYMVFEYMDHD--LTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
+V EYM L L G +PQ+ Q+ +G+
Sbjct: 76 -----------------PIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 118
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNR----VITLWYRPP 177
Y +HRD++ +N+L+ K+ADFGLAR +N T R W P
Sbjct: 119 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLI---EDNEXTARQGAKFPIKWTAPE 175
Query: 178 ELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKI 221
L G ++ D+WS G + EL G+ PG E L ++
Sbjct: 176 AALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 218
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 30/231 (12%)
Query: 40 REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMD--HDLTGLA 97
RE+ IL+++ H NVI L ++ + R ++ E + LA
Sbjct: 64 REVSILRQVLHHNVITLHDVYEN----------------RTDVVLILELVSGGELFDFLA 107
Query: 98 DRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG----NLKLADFGL 153
+ L + + ++KQ+L G++Y H ++ H D+K N+++ ++ ++KL DFGL
Sbjct: 108 QKESL--SEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 154 ARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKN 213
A + N T + PE ++ G DMWS+G I LL+G G
Sbjct: 166 AHEI--EDGVEFKNIFGTPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 222
Query: 214 EAEQLSKIFELCGSPDETIWPGVSKMPA--YNHFKPSRTMKR-RVREVFRH 261
+ E L+ I + DE + S++ T KR ++E RH
Sbjct: 223 KQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 108/256 (42%), Gaps = 56/256 (21%)
Query: 40 REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTG---L 96
RE +I +KLQH N+++L D + Y+VF+ + TG
Sbjct: 54 REARICRKLQHPNIVRLH----------------DSIQEESFHYLVFDLV----TGGELF 93
Query: 97 ADRPGLRFTVPQIKCY-MKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGN---LKLADFG 152
D F + ++Q+L + YCH N ++HR++K NLL+ ++ +KLADFG
Sbjct: 94 EDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFG 153
Query: 153 LARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGK 212
LA + + T Y PE +L Y VD+W+ G I LL G P +
Sbjct: 154 LA--IEVNDSEAWHGFAGTPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWDE 210
Query: 213 NEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEK 272
++ ++I K AY++ P + A L++
Sbjct: 211 DQHRLYAQI----------------KAGAYDYPSPE----------WDTVTPEAKSLIDS 244
Query: 273 MLMLDPSQRISAKDAL 288
ML ++P +RI+A AL
Sbjct: 245 MLTVNPKKRITADQAL 260
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 69/122 (56%), Gaps = 7/122 (5%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQ-VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN 162
F+ + + Y ++++ L Y H + V++RD+K NL++D +G++K+ DFGL + D
Sbjct: 248 FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD-G 306
Query: 163 NTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIF 222
T+ T Y PE +L YG AVD W +G + E++ G+ LP N+ + K+F
Sbjct: 307 ATMKTFCGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE--KLF 361
Query: 223 EL 224
EL
Sbjct: 362 EL 363
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 69/122 (56%), Gaps = 7/122 (5%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQ-VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN 162
F+ + + Y ++++ L Y H + V++RD+K NL++D +G++K+ DFGL + D
Sbjct: 245 FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD-G 303
Query: 163 NTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIF 222
T+ T Y PE +L YG AVD W +G + E++ G+ LP N+ + K+F
Sbjct: 304 ATMKTFCGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE--KLF 358
Query: 223 EL 224
EL
Sbjct: 359 EL 360
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 83 YMVFEY-MDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID 141
Y+V +Y + DL L + R + Y+ +++ + H +HRDIK N+L+D
Sbjct: 150 YLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD 209
Query: 142 NEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLL----GATKYGPAVDMWSVGC 197
G+++LADFG D + V T Y PE+L G +YGP D WS+G
Sbjct: 210 MNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGV 269
Query: 198 IFAELLNGKPILPGKNEAEQLSKI 221
E+L G+ ++ E KI
Sbjct: 270 CMYEMLYGETPFYAESLVETYGKI 293
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 37/202 (18%)
Query: 19 IVALKKIR--MDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGN 76
+VA+K ++ DN ++ F RE ++L LQHE+++K + P
Sbjct: 45 LVAVKTLKDASDNARKDFH----REAELLTNLQHEHIVKFYGVCVEGDP----------- 89
Query: 77 KYRGSTYMVFEYMDH------------DLTGLAD-RPGLRFTVPQIKCYMKQLLTGLHYC 123
MVFEYM H D +A+ P T Q+ +Q+ G+ Y
Sbjct: 90 -----LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL 144
Query: 124 HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARS-FSYDHNNTLTNRVITLWYRPPELLLG 182
+HRD+ N L+ +K+ DFG++R +S D+ + ++ + + PPE ++
Sbjct: 145 ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM- 203
Query: 183 ATKYGPAVDMWSVGCIFAELLN 204
K+ D+WS+G + E+
Sbjct: 204 YRKFTTESDVWSLGVVLWEIFT 225
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 38 AIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLA 97
A+ E KIL K+ ++ L + +G R Y V E
Sbjct: 232 AMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDE---------- 281
Query: 98 DRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF 157
D PG F P+ Y Q+++GL + H +++RD+K N+L+D++GN++++D GLA
Sbjct: 282 DNPG--FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339
Query: 158 SYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK 206
T T + PELLLG +Y +VD +++G E++ +
Sbjct: 340 KAGQTKT-KGYAGTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 38 AIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLA 97
A+ E KIL K+ ++ L + +G R Y V E
Sbjct: 232 AMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDE---------- 281
Query: 98 DRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF 157
D PG F P+ Y Q+++GL + H +++RD+K N+L+D++GN++++D GLA
Sbjct: 282 DNPG--FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339
Query: 158 SYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK 206
T T + PELLLG +Y +VD +++G E++ +
Sbjct: 340 KAGQTKT-KGYAGTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN 163
F+ ++ Y +++ GL + H V++RD+K +N+L+D G+++++D GLA FS +
Sbjct: 288 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 347
Query: 164 TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNG 205
V T Y PE+L Y + D +S+GC+ +LL G
Sbjct: 348 A---SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 38 AIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLA 97
A+ E KIL K+ ++ L + +G R Y V E
Sbjct: 232 AMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDE---------- 281
Query: 98 DRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF 157
D PG F P+ Y Q+++GL + H +++RD+K N+L+D++GN++++D GLA
Sbjct: 282 DNPG--FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339
Query: 158 SYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK 206
T T + PELLLG +Y +VD +++G E++ +
Sbjct: 340 KAGQTKT-KGYAGTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN 163
F+ ++ Y +++ GL + H V++RD+K +N+L+D G+++++D GLA FS +
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 348
Query: 164 TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNG 205
V T Y PE+L Y + D +S+GC+ +LL G
Sbjct: 349 A---SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 24 KIRMDNEKEGF--PITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGS 81
K+ + + K+G P + E ++K+LQH+ +++L +VT +
Sbjct: 35 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-----------------QEP 77
Query: 82 TYMVFEYMDH-DLTGLADRP-GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
Y++ EYM++ L P G++ T+ ++ Q+ G+ + +HR+++ +N+L
Sbjct: 78 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANIL 137
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAV---DMWSVG 196
+ + + K+ADFGLAR + + + PE A YG D+WS G
Sbjct: 138 VSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE----AINYGTFTIKSDVWSFG 193
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKI 221
+ E++ G+ PG E + +
Sbjct: 194 ILLTEIVTHGRIPYPGMTNPEVIQNL 219
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 93 LTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLI---DNEGNLKLA 149
+ + +R FT + M+ + T + + H + + HRD+K NLL + + LKL
Sbjct: 95 FSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLT 154
Query: 150 DFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
DFG A+ + N L T +Y PE +LG KY + DMWS+G I LL G P
Sbjct: 155 DFGFAKETT---QNALQTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGFP 208
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 119/294 (40%), Gaps = 54/294 (18%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V E TG A K + +E + T +EI+ + L+H ++ L +
Sbjct: 67 VHRVTERATGNNFAAKFVMTPHESD--KETVRKEIQTMSVLRHPTLVNLHDAFE------ 118
Query: 68 DEQGRPDGNKYRGSTYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHV 125
D N+ M++E+M +AD + + + YM+Q+ GL + H
Sbjct: 119 ------DDNE----MVMIYEFMSGGELFEKVADEHN-KMSEDEAVEYMRQVCKGLCHMHE 167
Query: 126 NQVLHRDIKGSNLLIDNE--GNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
N +H D+K N++ + LKL DFGL D ++ T + PE+ G
Sbjct: 168 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL--DPKQSVKVTTGTAEFAAPEVAEGK 225
Query: 184 TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYN 243
G DMWSVG + LL+G G+N+ E L + + D++ + G+S+
Sbjct: 226 P-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISE----- 279
Query: 244 HFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDP 297
+ + K+L+ DP+ R++ AL E+ W P
Sbjct: 280 ---------------------DGKDFIRKLLLADPNTRMTIHQAL--EHPWLTP 310
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 38 AIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLA 97
A+ E KIL K+ ++ L + +G R Y V E
Sbjct: 232 AMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDE---------- 281
Query: 98 DRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF 157
D PG F P+ Y Q+++GL + H +++RD+K N+L+D++GN++++D GLA
Sbjct: 282 DNPG--FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339
Query: 158 SYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK 206
T T + PELLLG +Y +VD +++G E++ +
Sbjct: 340 KAGQTKT-KGYAGTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Query: 96 LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLI---DNEGNLKLADFG 152
+ +R FT + M+ + T + + H + + HRD+K NLL + + LKL DFG
Sbjct: 117 IQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG 176
Query: 153 LARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKP 207
A+ + N L T +Y PE +LG KY + DMWS+G I LL G P
Sbjct: 177 FAKETT---QNALQTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGFP 227
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 69/122 (56%), Gaps = 7/122 (5%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQ-VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN 162
F+ + + Y ++++ L Y H + V++RD+K NL++D +G++K+ DFGL + D
Sbjct: 107 FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD-G 165
Query: 163 NTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIF 222
T+ T Y PE +L YG AVD W +G + E++ G+ LP N+ + K+F
Sbjct: 166 ATMKXFCGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE--KLF 220
Query: 223 EL 224
EL
Sbjct: 221 EL 222
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN 163
F+ ++ Y +++ GL + H V++RD+K +N+L+D G+++++D GLA FS +
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 348
Query: 164 TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNG 205
V T Y PE+L Y + D +S+GC+ +LL G
Sbjct: 349 A---SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN 163
F+ ++ Y +++ GL + H V++RD+K +N+L+D G+++++D GLA FS +
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 348
Query: 164 TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNG 205
V T Y PE+L Y + D +S+GC+ +LL G
Sbjct: 349 A---SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 69/122 (56%), Gaps = 7/122 (5%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQ-VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN 162
F+ + + Y ++++ L Y H + V++RD+K NL++D +G++K+ DFGL + D
Sbjct: 105 FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD-G 163
Query: 163 NTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIF 222
T+ T Y PE +L YG AVD W +G + E++ G+ LP N+ + K+F
Sbjct: 164 ATMKXFCGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE--KLF 218
Query: 223 EL 224
EL
Sbjct: 219 EL 220
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 69/122 (56%), Gaps = 7/122 (5%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQ-VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN 162
F+ + + Y ++++ L Y H + V++RD+K NL++D +G++K+ DFGL + D
Sbjct: 106 FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD-G 164
Query: 163 NTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIF 222
T+ T Y PE +L YG AVD W +G + E++ G+ LP N+ + K+F
Sbjct: 165 ATMKXFCGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE--KLF 219
Query: 223 EL 224
EL
Sbjct: 220 EL 221
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 119/294 (40%), Gaps = 54/294 (18%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPER 67
V E TG A K + +E + T +EI+ + L+H ++ L +
Sbjct: 173 VHRVTERATGNNFAAKFVMTPHESD--KETVRKEIQTMSVLRHPTLVNLHDAFE------ 224
Query: 68 DEQGRPDGNKYRGSTYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHV 125
D N+ M++E+M +AD + + + YM+Q+ GL + H
Sbjct: 225 ------DDNE----MVMIYEFMSGGELFEKVADEHN-KMSEDEAVEYMRQVCKGLCHMHE 273
Query: 126 NQVLHRDIKGSNLLIDNE--GNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
N +H D+K N++ + LKL DFGL D ++ T + PE+ G
Sbjct: 274 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL--DPKQSVKVTTGTAEFAAPEVAEGK 331
Query: 184 TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYN 243
G DMWSVG + LL+G G+N+ E L + + D++ + G+S+
Sbjct: 332 -PVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISE----- 385
Query: 244 HFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYFWTDP 297
+ + K+L+ DP+ R++ AL E+ W P
Sbjct: 386 ---------------------DGKDFIRKLLLADPNTRMTIHQAL--EHPWLTP 416
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 20/167 (11%)
Query: 41 EIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADR 99
E I+ + H N+I+L+ +VT P +V E M++ L +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKP----------------VMIVTEXMENGSLDSFLRK 139
Query: 100 PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSY 159
+FTV Q+ ++ + +G+ Y +HRD+ N+LI++ K++DFGL+R
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 160 DHNNTLTNR--VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN 204
D T R I + + PE + K+ A D+WS G + E+++
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 98/229 (42%), Gaps = 41/229 (17%)
Query: 4 CISQVFMAREI-------KTGEIVALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIK 55
C QV MA + K VA+K ++ D+ E + E++++K + +H+N+I
Sbjct: 36 CFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHKNIIN 94
Query: 56 LKEIVTSPGP-----ERDEQG---------RPDGNKYRGSTYMVFEYMDHDLTGLADRPG 101
L T GP E +G RP G +Y +D+ + P
Sbjct: 95 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY-----------SYDINRV---PE 140
Query: 102 LRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF-SYD 160
+ T + QL G+ Y + +HRD+ N+L+ +K+ADFGLAR + D
Sbjct: 141 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 200
Query: 161 HNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAEL--LNGKP 207
+ TN + + + PE L Y D+WS G + E+ L G P
Sbjct: 201 YYKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSP 248
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 98/229 (42%), Gaps = 41/229 (17%)
Query: 4 CISQVFMAREI-------KTGEIVALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIK 55
C QV MA + K VA+K ++ D+ E + E++++K + +H+N+I
Sbjct: 34 CFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHKNIIN 92
Query: 56 LKEIVTSPGP-----ERDEQG---------RPDGNKYRGSTYMVFEYMDHDLTGLADRPG 101
L T GP E +G RP G +Y +D+ + P
Sbjct: 93 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY-----------SYDINRV---PE 138
Query: 102 LRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF-SYD 160
+ T + QL G+ Y + +HRD+ N+L+ +K+ADFGLAR + D
Sbjct: 139 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNID 198
Query: 161 HNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAEL--LNGKP 207
+ TN + + + PE L Y D+WS G + E+ L G P
Sbjct: 199 YYKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSP 246
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 98/229 (42%), Gaps = 41/229 (17%)
Query: 4 CISQVFMAREI-------KTGEIVALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIK 55
C QV MA + K VA+K ++ D+ E + E++++K + +H+N+I
Sbjct: 39 CFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHKNIIN 97
Query: 56 LKEIVTSPGP-----ERDEQG---------RPDGNKYRGSTYMVFEYMDHDLTGLADRPG 101
L T GP E +G RP G +Y +D+ + P
Sbjct: 98 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY-----------SYDINRV---PE 143
Query: 102 LRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF-SYD 160
+ T + QL G+ Y + +HRD+ N+L+ +K+ADFGLAR + D
Sbjct: 144 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 203
Query: 161 HNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAEL--LNGKP 207
+ TN + + + PE L Y D+WS G + E+ L G P
Sbjct: 204 YYKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSP 251
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 98/229 (42%), Gaps = 41/229 (17%)
Query: 4 CISQVFMAREI-------KTGEIVALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIK 55
C QV MA + K VA+K ++ D+ E + E++++K + +H+N+I
Sbjct: 93 CFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHKNIIN 151
Query: 56 LKEIVTSPGP-----ERDEQG---------RPDGNKYRGSTYMVFEYMDHDLTGLADRPG 101
L T GP E +G RP G +Y +D+ + P
Sbjct: 152 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY-----------SYDINRV---PE 197
Query: 102 LRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF-SYD 160
+ T + QL G+ Y + +HRD+ N+L+ +K+ADFGLAR + D
Sbjct: 198 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 257
Query: 161 HNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAEL--LNGKP 207
+ TN + + + PE L Y D+WS G + E+ L G P
Sbjct: 258 YYKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSP 305
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 128/311 (41%), Gaps = 52/311 (16%)
Query: 17 GEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGN 76
G VALK I+ E + A EI +L+K+ ++ P + D
Sbjct: 59 GARVALKIIK---NVEKYKEAARLEINVLEKINEKD----------PDNKNLCVQMFDWF 105
Query: 77 KYRGSTYMVFEYMD-HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKG 135
Y G + FE + L D L + + Q++ QL + + H N++ H D+K
Sbjct: 106 DYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKP 165
Query: 136 SNLLIDNEG-------------------NLKLADFGLARSFSYDHNNTLTNRVITLWYRP 176
N+L N +++ DFG A +F ++H++T+ V T YR
Sbjct: 166 ENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSA-TFDHEHHSTI---VSTRHYRA 221
Query: 177 PELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCG-SPDETIWPG 235
PE++L P D+WS+GCI E G + + E L+ + + G P I
Sbjct: 222 PEVILELGWSQPC-DVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILGPIPSRMIRKT 280
Query: 236 VSKMPAYN---HFKPSRTMKRRVREVFRHFDRH----------ALELLEKMLMLDPSQRI 282
+ Y + + + R VRE + R+ +L+E ML +P++R+
Sbjct: 281 RKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEHHQLFDLIESMLEYEPAKRL 340
Query: 283 SAKDALDSEYF 293
+ +AL +F
Sbjct: 341 TLGEALQHPFF 351
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 26/189 (13%)
Query: 19 IVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
I ALK + ++ F + E I+ + H N+I+L+ +VT
Sbjct: 82 IKALKAGYTERQRRDF----LSEASIMGQFDHPNIIRLEGVVT----------------- 120
Query: 79 RGSTYMVF-EYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGS 136
RG M+ EYM++ L +FT+ Q+ ++ + G+ Y +HRD+
Sbjct: 121 RGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAAR 180
Query: 137 NLLIDNEGNLKLADFGLARSFSYDHN--NTLTNRVITLWYRPPELLLGATKYGPAVDMWS 194
N+L+D+ K++DFGL+R D + T T I + + PE + T + A D+WS
Sbjct: 181 NVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRT-FSSASDVWS 239
Query: 195 VGCIFAELL 203
G + E+L
Sbjct: 240 FGVVMWEVL 248
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 20/167 (11%)
Query: 41 EIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADR 99
E I+ + H N+I L+ +VT P +V EYM++ L +
Sbjct: 73 EASIMGQFDHPNIIHLEGVVTKSKP----------------VMIVTEYMENGSLDTFLKK 116
Query: 100 PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSY 159
+FTV Q+ ++ + G+ Y +HRD+ N+LI++ K++DFGL+R
Sbjct: 117 NDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 176
Query: 160 DHNNTLTNR--VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN 204
D T R I + + PE + K+ A D+WS G + E+++
Sbjct: 177 DPEAAYTTRGGKIPIRWTAPE-AIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 30/231 (12%)
Query: 40 REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMD--HDLTGLA 97
RE+ IL+++ H N+I L ++ + R ++ E + LA
Sbjct: 64 REVSILRQVLHPNIITLHDVYEN----------------RTDVVLILELVSGGELFDFLA 107
Query: 98 DRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEG----NLKLADFGL 153
+ L + + ++KQ+L G++Y H ++ H D+K N+++ ++ ++KL DFGL
Sbjct: 108 QKESL--SEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 154 ARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKN 213
A + N T + PE ++ G DMWS+G I LL+G G
Sbjct: 166 AHEI--EDGVEFKNIFGTPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 222
Query: 214 EAEQLSKIFELCGSPDETIWPGVSKMPA--YNHFKPSRTMKR-RVREVFRH 261
+ E L+ I + DE + S++ T KR ++E RH
Sbjct: 223 KQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 20/167 (11%)
Query: 41 EIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADR 99
E I+ + H N+I+L+ +VT P +V E M++ L +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKP----------------VMIVTEXMENGSLDSFLRK 139
Query: 100 PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSY 159
+FTV Q+ ++ + +G+ Y +HRD+ N+LI++ K++DFGL+R
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 160 DHNNTLTNR--VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN 204
D T R I + + PE + K+ A D+WS G + E+++
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 26/189 (13%)
Query: 19 IVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
I ALK + ++ F + E I+ + H N+I+L+ +VT
Sbjct: 82 IKALKAGYTERQRRDF----LSEASIMGQFDHPNIIRLEGVVT----------------- 120
Query: 79 RGSTYMVF-EYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGS 136
RG M+ EYM++ L +FT+ Q+ ++ + G+ Y +HRD+
Sbjct: 121 RGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAAR 180
Query: 137 NLLIDNEGNLKLADFGLARSFSYDHNN--TLTNRVITLWYRPPELLLGATKYGPAVDMWS 194
N+L+D+ K++DFGL+R D + T T I + + PE + T + A D+WS
Sbjct: 181 NVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRT-FSSASDVWS 239
Query: 195 VGCIFAELL 203
G + E+L
Sbjct: 240 FGVVMWEVL 248
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 41/247 (16%)
Query: 40 REIKILKKLQ-HENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLAD 98
+EI LK + H N++KL E+ + T++V E ++
Sbjct: 54 KEITALKLCEGHPNIVKLHEVFHD----------------QLHTFLVMELLNGGELFERI 97
Query: 99 RPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGN---LKLADFGLAR 155
+ F+ + M++L++ + + H V+HRD+K NLL +E + +K+ DFG AR
Sbjct: 98 KKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFAR 157
Query: 156 SFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEA 215
D N L TL Y PE LL Y + D+WS+G I +L+G+ +P ++
Sbjct: 158 LKPPD-NQPLKTPCFTLHYAAPE-LLNQNGYDESCDLWSLGVILYTMLSGQ--VPFQSHD 213
Query: 216 EQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLM 275
L+ C S E + K F E +++ + A +L++ +L
Sbjct: 214 RSLT-----CTSAVE-----IMKKIKKGDFSFE-------GEAWKNVSQEAKDLIQGLLT 256
Query: 276 LDPSQRI 282
+DP++R+
Sbjct: 257 VDPNKRL 263
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 111/263 (42%), Gaps = 66/263 (25%)
Query: 41 EIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADR 99
EI+IL + QH N+I LK++ D KY Y+V E M L D+
Sbjct: 65 EIEILLRYGQHPNIITLKDVY-------------DDGKY---VYVVTELMKGG--ELLDK 106
Query: 100 PGLR---FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL-IDNEGN---LKLADFG 152
LR F+ + + + + Y H V+HRD+K SN+L +D GN +++ DFG
Sbjct: 107 I-LRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFG 165
Query: 153 LARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNG-KPILPG 211
A+ + N L T + PE +L Y A D+WS+G + +L G P G
Sbjct: 166 FAKQLRAE-NGLLMTPCYTANFVAPE-VLERQGYDAACDIWSLGVLLYTMLTGYTPFANG 223
Query: 212 KNEA--EQLSKI----FELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRH 265
++ E L++I F L G W VS
Sbjct: 224 PDDTPEEILARIGSGKFSLSGG----YWNSVSDT-------------------------- 253
Query: 266 ALELLEKMLMLDPSQRISAKDAL 288
A +L+ KML +DP QR++A L
Sbjct: 254 AKDLVSKMLHVDPHQRLTAALVL 276
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 26/209 (12%)
Query: 8 VFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQ-HENVIKLKEIVTSPGPE 66
V+ A+++ +G ALK++ + E++ I I+E+ +KKL H N+++ S G E
Sbjct: 44 VYEAQDVGSGREYALKRLLSNEEEKNRAI--IQEVCFMKKLSGHPNIVQFCS-AASIGKE 100
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRF-TVPQIKCYMKQLLTGLHYCHV 125
+ G+ + + T + + L + R L TV +I Q + + H
Sbjct: 101 ESDTGQAE---FLLLTELCKGQLVEFLKKMESRGPLSCDTVLKI---FYQTCRAVQHMHR 154
Query: 126 NQ--VLHRDIKGSNLLIDNEGNLKLADFGLARSFSY--DHNNTLTNRVI---------TL 172
+ ++HRD+K NLL+ N+G +KL DFG A + S+ D++ + R + T
Sbjct: 155 QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTP 214
Query: 173 WYRPPELLLGATKY--GPAVDMWSVGCIF 199
YR PE++ + + G D+W++GCI
Sbjct: 215 MYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 20/167 (11%)
Query: 41 EIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADR 99
E I+ + H N+I+L+ +VT P +V E M++ L +
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKP----------------VMIVTEXMENGSLDSFLRK 110
Query: 100 PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSY 159
+FTV Q+ ++ + +G+ Y +HRD+ N+LI++ K++DFGL+R
Sbjct: 111 HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 170
Query: 160 DHNNTLTNR--VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN 204
D T R I + + PE + K+ A D+WS G + E+++
Sbjct: 171 DPEAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 113/257 (43%), Gaps = 57/257 (22%)
Query: 40 REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDL-TG--L 96
RE +I + L+H N+++L + ++ G F Y+ DL TG L
Sbjct: 52 REARICRLLKHSNIVRLHDSISEEG---------------------FHYLVFDLVTGGEL 90
Query: 97 ADRPGLR--FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNE---GNLKLADF 151
+ R ++ ++Q+L + +CH V+HRD+K NLL+ ++ +KLADF
Sbjct: 91 FEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADF 150
Query: 152 GLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPG 211
GLA D T Y PE +L YG VD+W+ G I LL G P
Sbjct: 151 GLAIEVQGDQQAWF-GFAGTPGYLSPE-VLRKEAYGKPVDIWACGVILYILLVGYPPFWD 208
Query: 212 KNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLE 271
+++ + +I G+ D +P P ++ P A L+
Sbjct: 209 EDQHKLYQQI--KAGAYD---FPS----PEWDTVTPE-----------------AKNLIN 242
Query: 272 KMLMLDPSQRISAKDAL 288
+ML ++P++RI+A +AL
Sbjct: 243 QMLTINPAKRITAHEAL 259
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 5/144 (3%)
Query: 83 YMVFEY-MDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID 141
Y+V +Y + DL L + + + Y+ +++ + H +HRDIK N+L+D
Sbjct: 166 YLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLD 225
Query: 142 NEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLL----GATKYGPAVDMWSVGC 197
G+++LADFG + D + V T Y PE+L G KYGP D WS+G
Sbjct: 226 VNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGV 285
Query: 198 IFAELLNGKPILPGKNEAEQLSKI 221
E+L G+ ++ E KI
Sbjct: 286 CMYEMLYGETPFYAESLVETYGKI 309
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 64/134 (47%), Gaps = 8/134 (5%)
Query: 79 RGSTYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGS 136
R +V E +D + + DR FT + K + + Y H + HRD+K
Sbjct: 131 RKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPE 190
Query: 137 NLLIDNE---GNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMW 193
NLL ++ LKL DFG A+ + +N+LT T +Y PE +LG KY + D W
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDXW 247
Query: 194 SVGCIFAELLNGKP 207
S+G I LL G P
Sbjct: 248 SLGVIXYILLCGYP 261
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 111/259 (42%), Gaps = 54/259 (20%)
Query: 6 SQVFMAREIKTGEIVALKKIRMDNEKEGFPI-TAIREIKILKKLQHENVIKLKEIVTSPG 64
+ VF R KTG++ A+K +N P+ +RE ++LKKL H+N++KL I
Sbjct: 23 ANVFRGRHKKTGDLFAIKV--FNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI----- 75
Query: 65 PERDEQGRPDGNKYR----GSTYMVFEYMDHDLTGLADRPGLRFTVP--QIKCYMKQLLT 118
E + R GS Y V E P + +P + ++ ++
Sbjct: 76 -EEETTTRHKVLIMEFCPCGSLYTVLE-----------EPSNAYGLPESEFLIVLRDVVG 123
Query: 119 GLHYCHVNQVLHRDIKGSNLLI----DNEGNLKLADFGLARSFSYDHNNTLTNRVITLW- 173
G+++ N ++HR+IK N++ D + KL DFG AR D + ++L+
Sbjct: 124 GMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD------EQFVSLYG 177
Query: 174 ---YRPPELLLGAT-------KYGPAVDMWSVGCIFAELLNG----KPILPGKNEAEQLS 219
Y P++ A KYG VD+WS+G F G +P + E +
Sbjct: 178 TEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMY 237
Query: 220 KIFELCGSPDETIWPGVSK 238
KI + G P I GV K
Sbjct: 238 KI--ITGKPSGAI-SGVQK 253
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 5/144 (3%)
Query: 83 YMVFEY-MDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID 141
Y+V +Y + DL L + + + Y+ +++ + H +HRDIK N+L+D
Sbjct: 150 YLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLD 209
Query: 142 NEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLL----GATKYGPAVDMWSVGC 197
G+++LADFG + D + V T Y PE+L G KYGP D WS+G
Sbjct: 210 VNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGV 269
Query: 198 IFAELLNGKPILPGKNEAEQLSKI 221
E+L G+ ++ E KI
Sbjct: 270 CMYEMLYGETPFYAESLVETYGKI 293
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 65/145 (44%), Gaps = 10/145 (6%)
Query: 83 YMVFEYM-DHDLTGLADRPGLRFTVPQ--IKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
YMV EYM DL L + VP+ + Y +++ L H +HRD+K N+L
Sbjct: 150 YMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNML 205
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLL---GATKYGPAVDMWSVG 196
+D G+LKLADFG + + V T Y PE+L G YG D WSVG
Sbjct: 206 LDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG 265
Query: 197 CIFAELLNGKPILPGKNEAEQLSKI 221
E+L G + SKI
Sbjct: 266 VFLYEMLVGDTPFYADSLVGTYSKI 290
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 65/145 (44%), Gaps = 10/145 (6%)
Query: 83 YMVFEYM-DHDLTGLADRPGLRFTVPQ--IKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
YMV EYM DL L + VP+ + Y +++ L H +HRD+K N+L
Sbjct: 145 YMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNML 200
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLL---GATKYGPAVDMWSVG 196
+D G+LKLADFG + + V T Y PE+L G YG D WSVG
Sbjct: 201 LDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG 260
Query: 197 CIFAELLNGKPILPGKNEAEQLSKI 221
E+L G + SKI
Sbjct: 261 VFLYEMLVGDTPFYADSLVGTYSKI 285
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 65/145 (44%), Gaps = 10/145 (6%)
Query: 83 YMVFEYM-DHDLTGLADRPGLRFTVPQ--IKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
YMV EYM DL L + VP+ + Y +++ L H +HRD+K N+L
Sbjct: 150 YMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNML 205
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLL---GATKYGPAVDMWSVG 196
+D G+LKLADFG + + V T Y PE+L G YG D WSVG
Sbjct: 206 LDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG 265
Query: 197 CIFAELLNGKPILPGKNEAEQLSKI 221
E+L G + SKI
Sbjct: 266 VFLYEMLVGDTPFYADSLVGTYSKI 290
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 83/187 (44%), Gaps = 29/187 (15%)
Query: 39 IREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHD--LTGL 96
+ E ++K LQH+ ++KL +VT + Y++ E+M L L
Sbjct: 231 LAEANVMKTLQHDKLVKLHAVVT-----------------KEPIYIITEFMAKGSLLDFL 273
Query: 97 ADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARS 156
G + +P++ + Q+ G+ + +HRD++ +N+L+ K+ADFGLAR
Sbjct: 274 KSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV 333
Query: 157 FSYDHNNTLTNR----VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPG 211
+N T R W P + G+ + D+WS G + E++ G+ PG
Sbjct: 334 I---EDNEYTAREGAKFPIKWTAPEAINFGS--FTIKSDVWSFGILLMEIVTYGRIPYPG 388
Query: 212 KNEAEQL 218
+ E +
Sbjct: 389 MSNPEVI 395
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 114/256 (44%), Gaps = 55/256 (21%)
Query: 40 REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTG--LA 97
RE +I + L+H N+++L + ++ G Y++F+ + TG L
Sbjct: 70 REARICRLLKHPNIVRLHDSISE----------------EGHHYLIFDLV----TGGELF 109
Query: 98 DRPGLR--FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNE---GNLKLADFG 152
+ R ++ ++Q+L + +CH V+HRD+K NLL+ ++ +KLADFG
Sbjct: 110 EDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFG 169
Query: 153 LARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGK 212
LA + T Y PE +L YG VD+W+ G I LL G P +
Sbjct: 170 LAIEVEGEQQAWF-GFAGTPGYLSPE-VLRKDPYGKPVDLWACGVILYILLVGYPPFWDE 227
Query: 213 NEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEK 272
++ +I G+ D +P P ++ P A +L+ K
Sbjct: 228 DQHRLYQQI--KAGAYD---FPS----PEWDTVTPE-----------------AKDLINK 261
Query: 273 MLMLDPSQRISAKDAL 288
ML ++PS+RI+A +AL
Sbjct: 262 MLTINPSKRITAAEAL 277
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 109/252 (43%), Gaps = 40/252 (15%)
Query: 6 SQVFMAREIKTGEIVALKKIRMDNEKEGFPITA-IREIKILKKLQHENVIKLKEIVTSPG 64
+ VF R KTG++ A+K +N P+ +RE ++LKKL H+N++KL I
Sbjct: 23 ANVFRGRHKKTGDLFAIKV--FNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI----- 75
Query: 65 PERDEQGRPDGNKYRGSTYMVFEYM-DHDLTGLADRPGLRFTVP--QIKCYMKQLLTGLH 121
E + R ++ E+ L + + P + +P + ++ ++ G++
Sbjct: 76 -EEETTTR--------HKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMN 126
Query: 122 YCHVNQVLHRDIKGSNLLI----DNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPP 177
+ N ++HR+IK N++ D + KL DFG AR D T Y P
Sbjct: 127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ--FVXLYGTEEYLHP 184
Query: 178 ELLLGAT-------KYGPAVDMWSVGCIFAELLNG----KPILPGKNEAEQLSKIFELCG 226
++ A KYG VD+WS+G F G +P + E + KI + G
Sbjct: 185 DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI--ITG 242
Query: 227 SPDETIWPGVSK 238
P I GV K
Sbjct: 243 KPSGAI-SGVQK 253
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 97/226 (42%), Gaps = 41/226 (18%)
Query: 7 QVFMAREI-------KTGEIVALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKE 58
QV MA + K VA+K ++ D +E + E++++K + +H+N+I L
Sbjct: 50 QVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLS-DLVSEMEMMKMIGKHKNIINLLG 108
Query: 59 IVTSPGP-----ERDEQG---------RPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRF 104
T GP E +G RP G +Y +D+ + P +
Sbjct: 109 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY-----------SYDINRV---PEEQM 154
Query: 105 TVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF-SYDHNN 163
T + QL G+ Y + +HRD+ N+L+ +K+ADFGLAR + D+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 164 TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAEL--LNGKP 207
TN + + + PE L Y D+WS G + E+ L G P
Sbjct: 215 KTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 83/187 (44%), Gaps = 29/187 (15%)
Query: 39 IREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHD--LTGL 96
+ E ++K LQH+ ++KL +VT + Y++ E+M L L
Sbjct: 58 LAEANVMKTLQHDKLVKLHAVVT-----------------KEPIYIITEFMAKGSLLDFL 100
Query: 97 ADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARS 156
G + +P++ + Q+ G+ + +HRD++ +N+L+ K+ADFGLAR
Sbjct: 101 KSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV 160
Query: 157 FSYDHNNTLTNR----VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPG 211
+N T R W P + G+ + D+WS G + E++ G+ PG
Sbjct: 161 I---EDNEYTAREGAKFPIKWTAPEAINFGS--FTIKSDVWSFGILLMEIVTYGRIPYPG 215
Query: 212 KNEAEQL 218
+ E +
Sbjct: 216 MSNPEVI 222
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 119/282 (42%), Gaps = 60/282 (21%)
Query: 41 EIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADR 99
EI+IL + QH N+I LK++ D K+ Y+V E M L D+
Sbjct: 70 EIEILLRYGQHPNIITLKDVY-------------DDGKH---VYLVTELMRGG--ELLDK 111
Query: 100 PGLR---FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL-IDNEGN---LKLADFG 152
LR F+ + + + + Y H V+HRD+K SN+L +D GN L++ DFG
Sbjct: 112 I-LRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFG 170
Query: 153 LARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNG-KPILPG 211
A+ + N L T + PE+L Y D+WS+G + +L G P G
Sbjct: 171 FAKQLRAE-NGLLMTPCYTANFVAPEVL-KRQGYDEGCDIWSLGILLYTMLAGYTPFANG 228
Query: 212 KNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLE 271
++ + +I GS T+ G N S T K +L+
Sbjct: 229 PSDTPE--EILTRIGSGKFTLSGG-------NWNTVSETAK---------------DLVS 264
Query: 272 KMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLPKYESSHE 313
KML +DP QR++AK L P LP+ + SH+
Sbjct: 265 KMLHVDPHQRLTAKQVLQH------PWVTQKDKLPQSQLSHQ 300
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 114/280 (40%), Gaps = 33/280 (11%)
Query: 18 EIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNK 77
E VA+K+I ++ + ++EI+ + + H N++ + +DE
Sbjct: 36 EKVAIKRINLEKCQTSMD-ELLKEIQAMSQCHHPNIVSY----YTSFVVKDELWLVMKLL 90
Query: 78 YRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSN 137
GS V + + H + + G+ I ++++L GL Y H N +HRD+K N
Sbjct: 91 SGGS---VLDIIKHIVAKGEHKSGV-LDESTIATILREVLEGLEYLHKNGQIHRDVKAGN 146
Query: 138 LLIDNEGNLKLADFG----LARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMW 193
+L+ +G++++ADFG LA N V T + PE++ Y D+W
Sbjct: 147 ILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIW 206
Query: 194 SVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKR 253
S G EL G +P P M + PS
Sbjct: 207 SFGITAIELATG--------------------AAPYHKYPPMKVLMLTLQNDPPSLETGV 246
Query: 254 RVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
+ +E+ + + + +++ L DP +R +A + L ++F
Sbjct: 247 QDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFF 286
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 81/172 (47%), Gaps = 24/172 (13%)
Query: 39 IREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLA 97
+ E I+ + +H N+I+L+ +VT+ P ++ E+M++ L
Sbjct: 63 LSEASIMGQFEHPNIIRLEGVVTNSMP----------------VMILTEFMENGALDSFL 106
Query: 98 DRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF 157
+FTV Q+ ++ + +G+ Y +HRD+ N+L+++ K++DFGL+R
Sbjct: 107 RLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFL 166
Query: 158 SYD-----HNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN 204
+ + ++L ++ W P + K+ A D WS G + E+++
Sbjct: 167 EENSSDPTYTSSLGGKIPIRWTAPEAIAF--RKFTSASDAWSYGIVMWEVMS 216
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 39/203 (19%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN-R 168
K Y K +L +H H + ++H D+K +N LI +G LKL DFG+A D + + + +
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 216
Query: 169 VITLWYRPPELLLGATK----------YGPAVDMWSVGCIFAELLNGKPILPGKNEAEQL 218
V T+ Y PPE + + P D+WS+GCI + GK P + Q+
Sbjct: 217 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQI 274
Query: 219 SKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDP 278
SK+ + E +P + P + ++ ++L+ L DP
Sbjct: 275 SKLHAIIDPNHEIEFPDI----------PEKDLQ---------------DVLKCCLKRDP 309
Query: 279 SQRISAKDALDSEYFWTDPLPCD 301
QRIS + L Y P +
Sbjct: 310 KQRISIPELLAHPYVQIQTHPVN 332
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Query: 116 LLTGLHYC-HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWY 174
+L GL Y +Q++HRD+K SN+L+++ G +KL DFG++ N+ T Y
Sbjct: 123 VLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG---TRSY 179
Query: 175 RPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIF 222
PE L G T Y D+WS+G EL G+ PI P +A++L IF
Sbjct: 180 MAPERLQG-THYSVQSDIWSMGLSLVELAVGRYPIPP--PDAKELEAIF 225
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 114/280 (40%), Gaps = 33/280 (11%)
Query: 18 EIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNK 77
E VA+K+I ++ + ++EI+ + + H N++ + +DE
Sbjct: 41 EKVAIKRINLEKCQTSMD-ELLKEIQAMSQCHHPNIVSY----YTSFVVKDELWLVMKLL 95
Query: 78 YRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSN 137
GS V + + H + + G+ I ++++L GL Y H N +HRD+K N
Sbjct: 96 SGGS---VLDIIKHIVAKGEHKSGV-LDESTIATILREVLEGLEYLHKNGQIHRDVKAGN 151
Query: 138 LLIDNEGNLKLADFG----LARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMW 193
+L+ +G++++ADFG LA N V T + PE++ Y D+W
Sbjct: 152 ILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIW 211
Query: 194 SVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKR 253
S G EL G +P P M + PS
Sbjct: 212 SFGITAIELATG--------------------AAPYHKYPPMKVLMLTLQNDPPSLETGV 251
Query: 254 RVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
+ +E+ + + + +++ L DP +R +A + L ++F
Sbjct: 252 QDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFF 291
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 35/192 (18%)
Query: 113 MKQLLTGLHYCHVNQVLHRDIKGSNLLI---DNEGNLK--LADFGLARSFSYDHNNTLTN 167
++Q +GL + H ++HRD+K N+LI + G +K ++DFGL + + ++
Sbjct: 124 LQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRR 183
Query: 168 RVI--TLWYRPPELLLGATKYGP--AVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFE 223
+ T + PE+L K P VD++S GC+F +++ GK+ Q + +
Sbjct: 184 SGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLG 243
Query: 224 LCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRIS 283
C + + P +H D A EL+EKM+ +DP +R S
Sbjct: 244 AC---------------SLDCLHPE-----------KHEDVIARELIEKMIAMDPQKRPS 277
Query: 284 AKDALDSEYFWT 295
AK L +FW+
Sbjct: 278 AKHVLKHPFFWS 289
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 119/283 (42%), Gaps = 60/283 (21%)
Query: 40 REIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLAD 98
EI+IL + QH N+I LK++ D K+ Y+V E M L D
Sbjct: 69 EEIEILLRYGQHPNIITLKDVY-------------DDGKH---VYLVTELMRGG--ELLD 110
Query: 99 RPGLR---FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL-IDNEGN---LKLADF 151
+ LR F+ + + + + Y H V+HRD+K SN+L +D GN L++ DF
Sbjct: 111 KI-LRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDF 169
Query: 152 GLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNG-KPILP 210
G A+ + N L T + PE+L Y D+WS+G + +L G P
Sbjct: 170 GFAKQLRAE-NGLLMTPCYTANFVAPEVL-KRQGYDEGCDIWSLGILLYTMLAGYTPFAN 227
Query: 211 GKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELL 270
G ++ + +I GS T+ G N S T K +L+
Sbjct: 228 GPSDTPE--EILTRIGSGKFTLSGG-------NWNTVSETAK---------------DLV 263
Query: 271 EKMLMLDPSQRISAKDALDSEYFWTDPLPCDPKSLPKYESSHE 313
KML +DP QR++AK L P LP+ + SH+
Sbjct: 264 SKMLHVDPHQRLTAKQVLQH------PWVTQKDKLPQSQLSHQ 300
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 39/204 (19%)
Query: 19 IVALKKIRMDNE--KEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGN 76
+VA+K ++ +E ++ F RE ++L LQH+++++ + T +GRP
Sbjct: 73 LVAVKALKEASESARQDFQ----REAELLTMLQHQHIVRFFGVCT--------EGRP--- 117
Query: 77 KYRGSTYMVFEYMDHD---------------LTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
MVFEYM H L G D + Q+ Q+ G+
Sbjct: 118 -----LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMV 172
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARS-FSYDHNNTLTNRVITLWYRPPELL 180
Y +HRD+ N L+ +K+ DFG++R +S D+ ++ + + PPE +
Sbjct: 173 YLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESI 232
Query: 181 LGATKYGPAVDMWSVGCIFAELLN 204
L K+ D+WS G + E+
Sbjct: 233 L-YRKFTTESDVWSFGVVLWEIFT 255
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 97/226 (42%), Gaps = 41/226 (18%)
Query: 7 QVFMAREI-------KTGEIVALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKE 58
QV MA + K VA+K ++ D+ E + E++++K + +H+N+I L
Sbjct: 50 QVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHKNIINLLG 108
Query: 59 IVTSPGP-----ERDEQG---------RPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRF 104
T GP E +G RP G +Y +D+ + P +
Sbjct: 109 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY-----------SYDINRV---PEEQM 154
Query: 105 TVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF-SYDHNN 163
T + QL G+ Y + +HRD+ N+L+ +K+ADFGLAR + D+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 164 TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAEL--LNGKP 207
TN + + + PE L Y D+WS G + E+ L G P
Sbjct: 215 NTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 81/172 (47%), Gaps = 24/172 (13%)
Query: 39 IREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLA 97
+ E I+ + +H N+I+L+ +VT+ P ++ E+M++ L
Sbjct: 65 LSEASIMGQFEHPNIIRLEGVVTNSMP----------------VMILTEFMENGALDSFL 108
Query: 98 DRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF 157
+FTV Q+ ++ + +G+ Y +HRD+ N+L+++ K++DFGL+R
Sbjct: 109 RLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFL 168
Query: 158 SYDHNN-----TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN 204
+ ++ +L ++ W P + K+ A D WS G + E+++
Sbjct: 169 EENSSDPTETSSLGGKIPIRWTAPEAIAF--RKFTSASDAWSYGIVMWEVMS 218
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 96/235 (40%), Gaps = 34/235 (14%)
Query: 19 IVALKKIRMDNEKEGFPIT------AIREIKILKKLQHENVIKLKEI----------VTS 62
+V LK++R+ +++ F I A E+ ++K Q V +K + V+
Sbjct: 50 VVRLKEVRL--QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSC 107
Query: 63 PGPERDEQGRPD---------GNKYRGSTYMVFEY-MDHDLTGLADRPGLRFTVPQIKCY 112
ERD D + Y+V EY + DL L + G R + Y
Sbjct: 108 FREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFY 167
Query: 113 MKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITL 172
+ +++ + H +HRDIK N+L+D G+++LADFG D V T
Sbjct: 168 LAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTP 227
Query: 173 WYRPPELLLGA------TKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKI 221
Y PE+L YGP D W++G E+ G+ + AE KI
Sbjct: 228 DYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKI 282
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 111/254 (43%), Gaps = 51/254 (20%)
Query: 40 REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMD--HDLTGLA 97
RE +I + L+H N+++L + ++ G Y++F+ + +
Sbjct: 59 REARICRLLKHPNIVRLHDSISEEGHH----------------YLIFDLVTGGELFEDIV 102
Query: 98 DRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNE---GNLKLADFGLA 154
R ++ ++Q+L + +CH V+HR++K NLL+ ++ +KLADFGLA
Sbjct: 103 ARE--YYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA 160
Query: 155 RSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNE 214
+ T Y PE +L YG VD+W+ G I LL G P +++
Sbjct: 161 IEVEGEQQAWF-GFAGTPGYLSPE-VLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ 218
Query: 215 AEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKML 274
+I G+ D +P P ++ P A +L+ KML
Sbjct: 219 HRLYQQI--KAGAYD---FPS----PEWDTVTPE-----------------AKDLINKML 252
Query: 275 MLDPSQRISAKDAL 288
++PS+RI+A +AL
Sbjct: 253 TINPSKRITAAEAL 266
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 18/156 (11%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRV 169
+ Y ++ L+Y H +++RD+K N+L+D+EG++KL D+G+ + +T +
Sbjct: 124 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFC 182
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGS-- 227
T Y PE+L G YG +VD W++G + E++ G+ P F++ GS
Sbjct: 183 GTPNYIAPEILRGE-DYGFSVDWWALGVLMFEMMAGRS--P-----------FDIVGSSD 228
Query: 228 -PDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHF 262
PD+ + ++ + R+M + V + F
Sbjct: 229 NPDQNTEDYLFQVILEKQIRIPRSMSVKAASVLKSF 264
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 29/199 (14%)
Query: 12 REIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQG 71
REI I LK + ++ F + E I+ + H NVI L+ +VT P
Sbjct: 60 REIFVA-IKTLKSGYTEKQRRDF----LSEASIMGQFDHPNVIHLEGVVTKSTP------ 108
Query: 72 RPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLH 130
++ E+M++ L + +FTV Q+ ++ + G+ Y +H
Sbjct: 109 ----------VMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVH 158
Query: 131 RDIKGSNLLIDNEGNLKLADFGLARSFSYD-----HNNTLTNRVITLWYRPPELLLGATK 185
RD+ N+L+++ K++DFGL+R D + + L ++ W P + K
Sbjct: 159 RDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA--IQYRK 216
Query: 186 YGPAVDMWSVGCIFAELLN 204
+ A D+WS G + E+++
Sbjct: 217 FTSASDVWSYGIVMWEVMS 235
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 39/203 (19%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN-R 168
K Y K +L +H H + ++H D+K +N LI +G LKL DFG+A D + + + +
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 216
Query: 169 VITLWYRPPELLLGATK----------YGPAVDMWSVGCIFAELLNGKPILPGKNEAEQL 218
V T+ Y PPE + + P D+WS+GCI + GK P + Q+
Sbjct: 217 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQI 274
Query: 219 SKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDP 278
SK+ + E +P + P + ++ ++L+ L DP
Sbjct: 275 SKLHAIIDPNHEIEFPDI----------PEKDLQ---------------DVLKCCLKRDP 309
Query: 279 SQRISAKDALDSEYFWTDPLPCD 301
QRIS + L Y P +
Sbjct: 310 KQRISIPELLAHPYVQIQTHPVN 332
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 39/203 (19%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN-R 168
K Y K +L +H H + ++H D+K +N LI +G LKL DFG+A D + + + +
Sbjct: 111 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 169
Query: 169 VITLWYRPPELLLGATK----------YGPAVDMWSVGCIFAELLNGKPILPGKNEAEQL 218
V T+ Y PPE + + P D+WS+GCI + GK P + Q+
Sbjct: 170 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQI 227
Query: 219 SKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDP 278
SK+ + E +P + P + ++ ++L+ L DP
Sbjct: 228 SKLHAIIDPNHEIEFPDI----------PEKDLQ---------------DVLKCCLKRDP 262
Query: 279 SQRISAKDALDSEYFWTDPLPCD 301
QRIS + L Y P +
Sbjct: 263 KQRISIPELLAHPYVQIQTHPVN 285
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 12/135 (8%)
Query: 113 MKQLLTGLHYCHVNQVLHRDIKGSNLLIDN---EGNLKLADFGLARSFSYDHNNTLTNRV 169
+KQ+L G++Y H N ++H D+K N+L+ + G++K+ DFG++R H L +
Sbjct: 137 IKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG--HACELREIM 194
Query: 170 ITLWYRPPELLLGATKYGP---AVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCG 226
T Y PE+L Y P A DMW++G I LL G++ E I ++
Sbjct: 195 GTPEYLAPEIL----NYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNV 250
Query: 227 SPDETIWPGVSKMPA 241
E + VS++
Sbjct: 251 DYSEETFSSVSQLAT 265
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRV 169
+ Y ++ L+Y H +++RD+K N+L+D+EG++KL D+G+ + +T +
Sbjct: 156 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSTFC 214
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK 206
T Y PE+L G YG +VD W++G + E++ G+
Sbjct: 215 GTPNYIAPEILRGE-DYGFSVDWWALGVLMFEMMAGR 250
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 97/226 (42%), Gaps = 41/226 (18%)
Query: 7 QVFMAREI-------KTGEIVALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKE 58
QV MA + K VA+K ++ D+ E + E++++K + +H+N+I L
Sbjct: 50 QVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHKNIITLLG 108
Query: 59 IVTSPGP-----ERDEQG---------RPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRF 104
T GP E +G RP G +Y +D+ + P +
Sbjct: 109 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY-----------SYDINRV---PEEQM 154
Query: 105 TVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF-SYDHNN 163
T + QL G+ Y + +HRD+ N+L+ +K+ADFGLAR + D+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 164 TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAEL--LNGKP 207
TN + + + PE L Y D+WS G + E+ L G P
Sbjct: 215 KTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 95/226 (42%), Gaps = 41/226 (18%)
Query: 7 QVFMAREI-------KTGEIVALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKE 58
QV MA + K VA+K ++ D+ E + E++++K + +H+N+I L
Sbjct: 50 QVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHKNIINLLG 108
Query: 59 IVTSPGP--------------ERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRF 104
T GP E RP G +Y +D+ + P +
Sbjct: 109 ACTQDGPLYVIVAYASKGNLREYLRARRPPGMEY-----------SYDINRV---PEEQM 154
Query: 105 TVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF-SYDHNN 163
T + QL G+ Y + +HRD+ N+L+ +K+ADFGLAR + D+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 164 TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAEL--LNGKP 207
TN + + + PE L Y D+WS G + E+ L G P
Sbjct: 215 KTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 95/226 (42%), Gaps = 41/226 (18%)
Query: 7 QVFMAREI-------KTGEIVALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKE 58
QV MA + K VA+K ++ D+ E + E++++K + +H+N+I L
Sbjct: 50 QVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHKNIINLLG 108
Query: 59 IVTSPGP--------------ERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRF 104
T GP E RP G +Y +D+ + P +
Sbjct: 109 ACTQDGPLYVIVGYASKGNLREYLRARRPPGMEY-----------SYDINRV---PEEQM 154
Query: 105 TVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF-SYDHNN 163
T + QL G+ Y + +HRD+ N+L+ +K+ADFGLAR + D+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 164 TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAEL--LNGKP 207
TN + + + PE L Y D+WS G + E+ L G P
Sbjct: 215 KTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 97/226 (42%), Gaps = 41/226 (18%)
Query: 7 QVFMAREI-------KTGEIVALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKE 58
QV MA + K VA+K ++ D+ E + E++++K + +H+N+I L
Sbjct: 50 QVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHKNIIHLLG 108
Query: 59 IVTSPGP-----ERDEQG---------RPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRF 104
T GP E +G RP G +Y +D+ + P +
Sbjct: 109 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY-----------SYDINRV---PEEQM 154
Query: 105 TVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF-SYDHNN 163
T + QL G+ Y + +HRD+ N+L+ +K+ADFGLAR + D+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 164 TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAEL--LNGKP 207
TN + + + PE L Y D+WS G + E+ L G P
Sbjct: 215 KTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNR 168
+ + Q+L + +CH VLHRDIK N+LID N G LKL DFG S + + T+
Sbjct: 118 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDF 174
Query: 169 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAE 216
T Y PPE + +G + +WS+G + +++ G +P +++ E
Sbjct: 175 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 220
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 39/203 (19%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN-R 168
K Y K +L +H H + ++H D+K +N LI +G LKL DFG+A D + + + +
Sbjct: 114 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 172
Query: 169 VITLWYRPPELLLGATK----------YGPAVDMWSVGCIFAELLNGKPILPGKNEAEQL 218
V T+ Y PPE + + P D+WS+GCI + GK P + Q+
Sbjct: 173 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQI 230
Query: 219 SKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDP 278
SK+ + E +P + P + ++ ++L+ L DP
Sbjct: 231 SKLHAIIDPNHEIEFPDI----------PEKDLQ---------------DVLKCCLKRDP 265
Query: 279 SQRISAKDALDSEYFWTDPLPCD 301
QRIS + L Y P +
Sbjct: 266 KQRISIPELLAHPYVQIQTHPVN 288
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 81/183 (44%), Gaps = 31/183 (16%)
Query: 39 IREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHD--LTGL 96
+ E ++K LQH+ ++KL +VT + Y++ E+M L L
Sbjct: 225 LAEANVMKTLQHDKLVKLHAVVT-----------------KEPIYIITEFMAKGSLLDFL 267
Query: 97 ADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARS 156
G + +P++ + Q+ G+ + +HRD++ +N+L+ K+ADFGLAR
Sbjct: 268 KSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR- 326
Query: 157 FSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEA 215
+ + W P + G+ + D+WS G + E++ G+ PG +
Sbjct: 327 --------VGAKFPIKWTAPEAINFGS--FTIKSDVWSFGILLMEIVTYGRIPYPGMSNP 376
Query: 216 EQL 218
E +
Sbjct: 377 EVI 379
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 39/203 (19%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN-R 168
K Y K +L +H H + ++H D+K +N LI +G LKL DFG+A D + + + +
Sbjct: 130 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 188
Query: 169 VITLWYRPPELLLGATK----------YGPAVDMWSVGCIFAELLNGKPILPGKNEAEQL 218
V T+ Y PPE + + P D+WS+GCI + GK P + Q+
Sbjct: 189 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQI 246
Query: 219 SKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDP 278
SK+ + E +P + P + ++ ++L+ L DP
Sbjct: 247 SKLHAIIDPNHEIEFPDI----------PEKDLQ---------------DVLKCCLKRDP 281
Query: 279 SQRISAKDALDSEYFWTDPLPCD 301
QRIS + L Y P +
Sbjct: 282 KQRISIPELLAHPYVQIQTHPVN 304
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNR 168
+ + Q+L + +CH VLHRDIK N+LID N G LKL DFG S + + T+
Sbjct: 113 RSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDF 169
Query: 169 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAE 216
T Y PPE + +G + +WS+G + +++ G +P +++ E
Sbjct: 170 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 215
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 39/203 (19%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN-R 168
K Y K +L +H H + ++H D+K +N LI +G LKL DFG+A D + + + +
Sbjct: 110 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 168
Query: 169 VITLWYRPPELLLGATK----------YGPAVDMWSVGCIFAELLNGKPILPGKNEAEQL 218
V T+ Y PPE + + P D+WS+GCI + GK P + Q+
Sbjct: 169 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQI 226
Query: 219 SKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDP 278
SK+ + E +P + P + ++ ++L+ L DP
Sbjct: 227 SKLHAIIDPNHEIEFPDI----------PEKDLQ---------------DVLKCCLKRDP 261
Query: 279 SQRISAKDALDSEYFWTDPLPCD 301
QRIS + L Y P +
Sbjct: 262 KQRISIPELLAHPYVQIQTHPVN 284
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNR 168
+ + Q+L + +CH VLHRDIK N+LID N G LKL DFG S + + T+
Sbjct: 118 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDF 174
Query: 169 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAE 216
T Y PPE + +G + +WS+G + +++ G +P +++ E
Sbjct: 175 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 220
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNR 168
+ + Q+L + +CH VLHRDIK N+LID N G LKL DFG S + + T+
Sbjct: 152 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDF 208
Query: 169 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAE 216
T Y PPE + +G + +WS+G + +++ G +P +++ E
Sbjct: 209 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 254
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNR 168
+ + Q+L + +CH VLHRDIK N+LID N G LKL DFG S + + T+
Sbjct: 140 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDF 196
Query: 169 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAE 216
T Y PPE + +G + +WS+G + +++ G +P +++ E
Sbjct: 197 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 242
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNR 168
+ + Q+L + +CH VLHRDIK N+LID N G LKL DFG S + + T+
Sbjct: 133 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDF 189
Query: 169 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAE 216
T Y PPE + +G + +WS+G + +++ G +P +++ E
Sbjct: 190 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 235
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNR 168
+ + Q+L + +CH VLHRDIK N+LID N G LKL DFG S + + T+
Sbjct: 118 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDF 174
Query: 169 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAE 216
T Y PPE + +G + +WS+G + +++ G +P +++ E
Sbjct: 175 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 220
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 22/168 (13%)
Query: 41 EIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADR 99
E I+ + H NV+ L+ +VT +G+P +V E+M++ L +
Sbjct: 94 EASIMGQFDHPNVVHLEGVVT--------RGKP--------VMIVIEFMENGALDAFLRK 137
Query: 100 PGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSY 159
+FTV Q+ ++ + G+ Y +HRD+ N+L+++ K++DFGL+R
Sbjct: 138 HDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIED 197
Query: 160 DHNNTLTN---RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN 204
D T ++ W P + K+ A D+WS G + E+++
Sbjct: 198 DPEAVYTTTGGKIPVRWTAPEAIQY--RKFTSASDVWSYGIVMWEVMS 243
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNR 168
+ + Q+L + +CH VLHRDIK N+LID N G LKL DFG S + + T+
Sbjct: 133 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDF 189
Query: 169 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAE 216
T Y PPE + +G + +WS+G + +++ G +P +++ E
Sbjct: 190 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 235
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNR 168
+ + Q+L + +CH VLHRDIK N+LID N G LKL DFG S + + T+
Sbjct: 133 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDF 189
Query: 169 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAE 216
T Y PPE + +G + +WS+G + +++ G +P +++ E
Sbjct: 190 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 235
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNR 168
+ + Q+L + +CH VLHRDIK N+LID N G LKL DFG S + + T+
Sbjct: 132 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDF 188
Query: 169 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAE 216
T Y PPE + +G + +WS+G + +++ G +P +++ E
Sbjct: 189 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 234
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNR 168
+ + Q+L + +CH VLHRDIK N+LID N G LKL DFG S + + T+
Sbjct: 132 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDF 188
Query: 169 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAE 216
T Y PPE + +G + +WS+G + +++ G +P +++ E
Sbjct: 189 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 234
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNR 168
+ + Q+L + +CH VLHRDIK N+LID N G LKL DFG S + + T+
Sbjct: 117 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDF 173
Query: 169 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAE 216
T Y PPE + +G + +WS+G + +++ G +P +++ E
Sbjct: 174 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 219
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 96/226 (42%), Gaps = 41/226 (18%)
Query: 7 QVFMAREI-------KTGEIVALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKE 58
QV MA + K VA+K ++ D+ E + E++++K + +H+N+I L
Sbjct: 50 QVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHKNIINLLG 108
Query: 59 IVTSPGP-----ERDEQG---------RPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRF 104
T GP E +G RP G +Y +D+ + P +
Sbjct: 109 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY-----------SYDINRV---PEEQM 154
Query: 105 TVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF-SYDHNN 163
T + QL G+ Y + +HRD+ N+L+ +K+ADFGLAR + D
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK 214
Query: 164 TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAEL--LNGKP 207
TN + + + PE L Y D+WS G + E+ L G P
Sbjct: 215 KTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNR 168
+ + Q+L + +CH VLHRDIK N+LID N G LKL DFG S + + T+
Sbjct: 117 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDF 173
Query: 169 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAE 216
T Y PPE + +G + +WS+G + +++ G +P +++ E
Sbjct: 174 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 219
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNR 168
+ + Q+L + +CH VLHRDIK N+LID N G LKL DFG S + + T+
Sbjct: 116 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDF 172
Query: 169 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAE 216
T Y PPE + +G + +WS+G + +++ G +P +++ E
Sbjct: 173 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 218
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 107/260 (41%), Gaps = 56/260 (21%)
Query: 37 TAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTG- 95
T EI I+ +L H +I L D + + ++ E+ L+G
Sbjct: 94 TVKNEISIMNQLHHPKLINLH----------------DAFEDKYEMVLILEF----LSGG 133
Query: 96 -LADRPG---LRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNE--GNLKLA 149
L DR + + ++ YM+Q GL + H + ++H DIK N++ + + ++K+
Sbjct: 134 ELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKII 193
Query: 150 DFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPIL 209
DFGLA + D +T T + PE ++ G DMW++G + LL+G
Sbjct: 194 DFGLATKLNPDEIVKVTTA--TAEFAAPE-IVDREPVGFYTDMWAIGVLGYVLLSGLSPF 250
Query: 210 PGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALEL 269
G+++ E L + DE + VS A +
Sbjct: 251 AGEDDLETLQNVKRCDWEFDEDAFSSVSP--------------------------EAKDF 284
Query: 270 LEKMLMLDPSQRISAKDALD 289
++ +L +P +R++ DAL+
Sbjct: 285 IKNLLQKEPRKRLTVHDALE 304
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNR 168
+ + Q+L + +CH VLHRDIK N+LID N G LKL DFG S + + T+
Sbjct: 145 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDF 201
Query: 169 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAE 216
T Y PPE + +G + +WS+G + +++ G +P +++ E
Sbjct: 202 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 247
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRV 169
+ Y ++ L+Y H +++RD+K N+L+D+EG++KL D+G+ + +T +
Sbjct: 113 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFC 171
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK 206
T Y PE+L G YG +VD W++G + E++ G+
Sbjct: 172 GTPNYIAPEILRGE-DYGFSVDWWALGVLMFEMMAGR 207
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNR 168
+ + Q+L + +CH VLHRDIK N+LID N G LKL DFG S + + T+
Sbjct: 146 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDF 202
Query: 169 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAE 216
T Y PPE + +G + +WS+G + +++ G +P +++ E
Sbjct: 203 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 248
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNR 168
+ + Q+L + +CH VLHRDIK N+LID N G LKL DFG S + + T+
Sbjct: 165 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDF 221
Query: 169 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNG 205
T Y PPE + +G + +WS+G + +++ G
Sbjct: 222 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 39/204 (19%)
Query: 19 IVALKKIRMDNE--KEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGN 76
+VA+K ++ +E ++ F RE ++L LQH+++++ + T +GRP
Sbjct: 44 LVAVKALKEASESARQDFQ----REAELLTMLQHQHIVRFFGVCT--------EGRP--- 88
Query: 77 KYRGSTYMVFEYMDHD---------------LTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
MVFEYM H L G D + Q+ Q+ G+
Sbjct: 89 -----LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMV 143
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARS-FSYDHNNTLTNRVITLWYRPPELL 180
Y +HRD+ N L+ +K+ DFG++R +S D+ ++ + + PPE +
Sbjct: 144 YLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESI 203
Query: 181 LGATKYGPAVDMWSVGCIFAELLN 204
L K+ D+WS G + E+
Sbjct: 204 L-YRKFTTESDVWSFGVVLWEIFT 226
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNR 168
+ + Q+L + +CH VLHRDIK N+LID N G LKL DFG S + + T+
Sbjct: 160 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDF 216
Query: 169 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAE 216
T Y PPE + +G + +WS+G + +++ G +P +++ E
Sbjct: 217 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 262
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRV 169
+ Y ++ L+Y H +++RD+K N+L+D+EG++KL D+G+ + +T +
Sbjct: 109 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFC 167
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK 206
T Y PE+L G YG +VD W++G + E++ G+
Sbjct: 168 GTPNYIAPEILRGE-DYGFSVDWWALGVLMFEMMAGR 203
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNR 168
+ + Q+L + +CH VLHRDIK N+LID N G LKL DFG S + + T+
Sbjct: 145 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDF 201
Query: 169 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAE 216
T Y PPE + +G + +WS+G + +++ G +P +++ E
Sbjct: 202 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 247
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNR 168
+ + Q+L + +CH VLHRDIK N+LID N G LKL DFG S + + T+
Sbjct: 146 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDF 202
Query: 169 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAE 216
T Y PPE + +G + +WS+G + +++ G +P +++ E
Sbjct: 203 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 248
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNR 168
+ + Q+L + +CH VLHRDIK N+LID N G LKL DFG S + + T+
Sbjct: 146 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDF 202
Query: 169 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAE 216
T Y PPE + +G + +WS+G + +++ G +P +++ E
Sbjct: 203 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 248
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNR 168
+ + Q+L + +CH VLHRDIK N+LID N G LKL DFG S + + T+
Sbjct: 160 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDF 216
Query: 169 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAE 216
T Y PPE + +G + +WS+G + +++ G +P +++ E
Sbjct: 217 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 262
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNR 168
+ + Q+L + +CH VLHRDIK N+LID N G LKL DFG S + + T+
Sbjct: 113 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDF 169
Query: 169 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAE 216
T Y PPE + +G + +WS+G + +++ G +P +++ E
Sbjct: 170 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 215
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNR 168
+ + Q+L + +CH VLHRDIK N+LID N G LKL DFG S + + T+
Sbjct: 113 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDF 169
Query: 169 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAE 216
T Y PPE + +G + +WS+G + +++ G +P +++ E
Sbjct: 170 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 215
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNR 168
+ + Q+L + +CH VLHRDIK N+LID N G LKL DFG S + + T+
Sbjct: 160 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDF 216
Query: 169 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAE 216
T Y PPE + +G + +WS+G + +++ G +P +++ E
Sbjct: 217 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 262
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 97/226 (42%), Gaps = 41/226 (18%)
Query: 7 QVFMAREI-------KTGEIVALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKE 58
QV MA + K VA+K ++ D+ E + E++++K + +H+N+I L
Sbjct: 50 QVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHKNIINLLG 108
Query: 59 IVTSPGP-----ERDEQG---------RPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRF 104
T GP E +G RP G +Y +D+ + P +
Sbjct: 109 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY-----------SYDINRV---PEEQM 154
Query: 105 TVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF-SYDHNN 163
T + QL G+ Y + +HRD+ N+L+ +++ADFGLAR + D+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYK 214
Query: 164 TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAEL--LNGKP 207
TN + + + PE L Y D+WS G + E+ L G P
Sbjct: 215 KTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 40/224 (17%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D ++ I E++++K + +H+N+I L T GP
Sbjct: 63 VAVKMLKSDATEKDLS-DLISEMEMMKMIGKHKNIINLLGACTQDGP------------- 108
Query: 79 RGSTYMVFEYMD----HDLTGLADRPGLRFTV-----PQIKCYMKQLLT-------GLHY 122
Y++ EY + + PGL ++ P+ + K L++ G+ Y
Sbjct: 109 ---LYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEY 165
Query: 123 CHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSY-DHNNTLTNRVITLWYRPPELLL 181
+ +HRD+ N+L+ + +K+ADFGLAR + D+ TN + + + PE L
Sbjct: 166 LASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF 225
Query: 182 GATKYGPAVDMWSVGCIFAEL--LNGKPILPGKNEAEQLSKIFE 223
Y D+WS G + E+ L G P PG E+L K+ +
Sbjct: 226 DRI-YTHQSDVWSFGVLLWEIFTLGGSP-YPGV-PVEELFKLLK 266
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNR 168
+ + Q+L + +CH VLHRDIK N+LID N G LKL DFG S + + T+
Sbjct: 146 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDF 202
Query: 169 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAE 216
T Y PPE + +G + +WS+G + +++ G +P +++ E
Sbjct: 203 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 248
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNR 168
+ + Q+L + +CH VLHRDIK N+LID N G LKL DFG S + + T+
Sbjct: 145 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDF 201
Query: 169 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAE 216
T Y PPE + +G + +WS+G + +++ G +P +++ E
Sbjct: 202 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 247
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNR 168
+ + Q+L + +CH VLHRDIK N+LID N G LKL DFG S + + T+
Sbjct: 145 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDF 201
Query: 169 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAE 216
T Y PPE + +G + +WS+G + +++ G +P +++ E
Sbjct: 202 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE 247
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 39/204 (19%)
Query: 19 IVALKKIRMDNE--KEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGN 76
+VA+K ++ +E ++ F RE ++L LQH+++++ + T +GRP
Sbjct: 50 LVAVKALKEASESARQDFQ----REAELLTMLQHQHIVRFFGVCT--------EGRP--- 94
Query: 77 KYRGSTYMVFEYMDHD---------------LTGLADRPGLRFTVPQIKCYMKQLLTGLH 121
MVFEYM H L G D + Q+ Q+ G+
Sbjct: 95 -----LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMV 149
Query: 122 YCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARS-FSYDHNNTLTNRVITLWYRPPELL 180
Y +HRD+ N L+ +K+ DFG++R +S D+ ++ + + PPE +
Sbjct: 150 YLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESI 209
Query: 181 LGATKYGPAVDMWSVGCIFAELLN 204
L K+ D+WS G + E+
Sbjct: 210 L-YRKFTTESDVWSFGVVLWEIFT 232
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 77/192 (40%), Gaps = 44/192 (22%)
Query: 39 IREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGL 96
+ E+K++ +L HEN++ L T GP Y++FEY + DL
Sbjct: 96 MSELKMMTQLGSHENIVNLLGACTLSGP----------------IYLIFEYCCYGDLLNY 139
Query: 97 ADRPGLRFTVPQIK----------------------CYMKQLLTGLHYCHVNQVLHRDIK 134
+F+ +I+ C+ Q+ G+ + +HRD+
Sbjct: 140 LRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLA 199
Query: 135 GSNLLIDNEGNLKLADFGLARSFSYDHNNTL--TNRVITLWYRPPELLLGATKYGPAVDM 192
N+L+ + +K+ DFGLAR D N + R+ W P L G Y D+
Sbjct: 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI--YTIKSDV 257
Query: 193 WSVGCIFAELLN 204
WS G + E+ +
Sbjct: 258 WSYGILLWEIFS 269
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 86/203 (42%), Gaps = 39/203 (19%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN-R 168
K Y K +L +H H + ++H D+K +N LI +G LKL DFG+A D + + +
Sbjct: 130 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQ 188
Query: 169 VITLWYRPPELLLGATK----------YGPAVDMWSVGCIFAELLNGKPILPGKNEAEQL 218
V T+ Y PPE + + P D+WS+GCI + GK P + Q+
Sbjct: 189 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQI 246
Query: 219 SKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDP 278
SK+ + E +P + P + ++ ++L+ L DP
Sbjct: 247 SKLHAIIDPNHEIEFPDI----------PEKDLQ---------------DVLKCCLKRDP 281
Query: 279 SQRISAKDALDSEYFWTDPLPCD 301
QRIS + L Y P +
Sbjct: 282 KQRISIPELLAHPYVQIQTHPVN 304
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 86/203 (42%), Gaps = 39/203 (19%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN-R 168
K Y K +L +H H + ++H D+K +N LI +G LKL DFG+A D + + + +
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 216
Query: 169 VITLWYRPPELLLGATK----------YGPAVDMWSVGCIFAELLNGKPILPGKNEAEQL 218
V + Y PPE + + P D+WS+GCI + GK P + Q+
Sbjct: 217 VGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQI 274
Query: 219 SKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLEKMLMLDP 278
SK+ + E +P + P + ++ ++L+ L DP
Sbjct: 275 SKLHAIIDPNHEIEFPDI----------PEKDLQ---------------DVLKCCLKRDP 309
Query: 279 SQRISAKDALDSEYFWTDPLPCD 301
QRIS + L Y P +
Sbjct: 310 KQRISIPELLAHPYVQIQTHPVN 332
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 30/141 (21%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDN--------------------- 142
F + IK Y ++L L+Y + H D+K N+L+D+
Sbjct: 134 FHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQI 193
Query: 143 ----EGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCI 198
+KL DFG A +F D++ ++ N T YR PE++L + + DMWS GC+
Sbjct: 194 YRTKSTGIKLIDFGCA-TFKSDYHGSIIN---TRQYRAPEVILNLG-WDVSSDMWSFGCV 248
Query: 199 FAELLNGKPILPGKNEAEQLS 219
AEL G + E L+
Sbjct: 249 LAELYTGSLLFRTHEHMEHLA 269
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 38/208 (18%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D ++ I E++++K + +H+N+I L T GP
Sbjct: 63 VAVKMLKSDATEKDLS-DLISEMEMMKMIGKHKNIINLLGACTQDGP------------- 108
Query: 79 RGSTYMVFEYMD----HDLTGLADRPGLRFTV-----PQIKCYMKQLLT-------GLHY 122
Y++ EY + PGL F+ P+ + K L++ G+ Y
Sbjct: 109 ---LYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEY 165
Query: 123 CHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSY-DHNNTLTNRVITLWYRPPELLL 181
+ +HRD+ N+L+ + +K+ADFGLAR + D TN + + + PE L
Sbjct: 166 LASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALF 225
Query: 182 GATKYGPAVDMWSVGCIFAEL--LNGKP 207
Y D+WS G + E+ L G P
Sbjct: 226 DRI-YTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 24/205 (11%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+K IR E I E +++ KL H +++L + P
Sbjct: 34 VAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVCLEQAP-------------- 76
Query: 80 GSTYMVFEYMDHDLTG--LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSN 137
+VFE+M+H L + GL F + + G+ Y V+HRD+ N
Sbjct: 77 --ICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEASVIHRDLAARN 133
Query: 138 LLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGC 197
L+ +K++DFG+ R D + T + + PE + ++Y D+WS G
Sbjct: 134 CLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE-VFSFSRYSSKSDVWSFGV 192
Query: 198 IFAELLN-GKPILPGKNEAEQLSKI 221
+ E+ + GK ++ +E + I
Sbjct: 193 LMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLID-NEGNLKLADFGLARSFSYDHNNTLTNR 168
+C+ Q++ + +CH V+HRDIK N+LID G KL DFG S + H+ T+
Sbjct: 142 RCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG---SGALLHDEPYTDF 198
Query: 169 VITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQL 218
T Y PPE + + +WS+G + +++ G +P + + E L
Sbjct: 199 DGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGD--IPFERDQEIL 246
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 77/169 (45%), Gaps = 24/169 (14%)
Query: 41 EIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTG--LAD 98
E I+ + H N+I+L+ +++ P ++ EYM++ L +
Sbjct: 96 EAGIMGQFSHHNIIRLEGVISKYKP----------------MMIITEYMENGALDKFLRE 139
Query: 99 RPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFS 158
+ G F+V Q+ ++ + G+ Y +HRD+ N+L+++ K++DFGL+R
Sbjct: 140 KDG-EFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 198
Query: 159 YDHNNTLTN---RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN 204
D T T ++ W P + K+ A D+WS G + E++
Sbjct: 199 DDPEATYTTSGGKIPIRWTAPEA--ISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 40/224 (17%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D ++ I E++++K + +H+N+I L T GP
Sbjct: 63 VAVKMLKSDATEKDLS-DLISEMEMMKMIGKHKNIINLLGACTQDGP------------- 108
Query: 79 RGSTYMVFEYMD----HDLTGLADRPGLRFTV-----PQIKCYMKQLLT-------GLHY 122
Y++ EY + PGL ++ P+ + K L++ G+ Y
Sbjct: 109 ---LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEY 165
Query: 123 CHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSY-DHNNTLTNRVITLWYRPPELLL 181
+ +HRD+ N+L+ + +K+ADFGLAR + D+ TN + + + PE L
Sbjct: 166 LASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF 225
Query: 182 GATKYGPAVDMWSVGCIFAEL--LNGKPILPGKNEAEQLSKIFE 223
Y D+WS G + E+ L G P PG E+L K+ +
Sbjct: 226 DRI-YTHQSDVWSFGVLLWEIFTLGGSP-YPGV-PVEELFKLLK 266
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 40/224 (17%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D ++ I E++++K + +H+N+I L T GP
Sbjct: 52 VAVKMLKSDATEKDLS-DLISEMEMMKMIGKHKNIINLLGACTQDGP------------- 97
Query: 79 RGSTYMVFEYMD----HDLTGLADRPGLRFTV-----PQIKCYMKQLLT-------GLHY 122
Y++ EY + PGL ++ P+ + K L++ G+ Y
Sbjct: 98 ---LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEY 154
Query: 123 CHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSY-DHNNTLTNRVITLWYRPPELLL 181
+ +HRD+ N+L+ + +K+ADFGLAR + D+ TN + + + PE L
Sbjct: 155 LASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF 214
Query: 182 GATKYGPAVDMWSVGCIFAEL--LNGKPILPGKNEAEQLSKIFE 223
Y D+WS G + E+ L G P PG E+L K+ +
Sbjct: 215 DRI-YTHQSDVWSFGVLLWEIFTLGGSP-YPGV-PVEELFKLLK 255
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 24/205 (11%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+K IR E I E +++ KL H +++L + P
Sbjct: 37 VAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVCLEQAP-------------- 79
Query: 80 GSTYMVFEYMDHDLTG--LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSN 137
+VFE+M+H L + GL F + + G+ Y V+HRD+ N
Sbjct: 80 --ICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARN 136
Query: 138 LLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGC 197
L+ +K++DFG+ R D + T + + PE + ++Y D+WS G
Sbjct: 137 CLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE-VFSFSRYSSKSDVWSFGV 195
Query: 198 IFAELLN-GKPILPGKNEAEQLSKI 221
+ E+ + GK ++ +E + I
Sbjct: 196 LMWEVFSEGKIPYENRSNSEVVEDI 220
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 40/224 (17%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D ++ I E++++K + +H+N+I L T GP
Sbjct: 55 VAVKMLKSDATEKDLS-DLISEMEMMKMIGKHKNIINLLGACTQDGP------------- 100
Query: 79 RGSTYMVFEYMD----HDLTGLADRPGLRFTV-----PQIKCYMKQLLT-------GLHY 122
Y++ EY + PGL ++ P+ + K L++ G+ Y
Sbjct: 101 ---LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEY 157
Query: 123 CHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSY-DHNNTLTNRVITLWYRPPELLL 181
+ +HRD+ N+L+ + +K+ADFGLAR + D+ TN + + + PE L
Sbjct: 158 LASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF 217
Query: 182 GATKYGPAVDMWSVGCIFAEL--LNGKPILPGKNEAEQLSKIFE 223
Y D+WS G + E+ L G P PG E+L K+ +
Sbjct: 218 DRI-YTHQSDVWSFGVLLWEIFTLGGSP-YPGV-PVEELFKLLK 258
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 40/224 (17%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D ++ I E++++K + +H+N+I L T GP
Sbjct: 56 VAVKMLKSDATEKDLS-DLISEMEMMKMIGKHKNIINLLGACTQDGP------------- 101
Query: 79 RGSTYMVFEYMD----HDLTGLADRPGLRFTV-----PQIKCYMKQLLT-------GLHY 122
Y++ EY + PGL ++ P+ + K L++ G+ Y
Sbjct: 102 ---LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEY 158
Query: 123 CHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSY-DHNNTLTNRVITLWYRPPELLL 181
+ +HRD+ N+L+ + +K+ADFGLAR + D+ TN + + + PE L
Sbjct: 159 LASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF 218
Query: 182 GATKYGPAVDMWSVGCIFAEL--LNGKPILPGKNEAEQLSKIFE 223
Y D+WS G + E+ L G P PG E+L K+ +
Sbjct: 219 DRI-YTHQSDVWSFGVLLWEIFTLGGSP-YPGV-PVEELFKLLK 259
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 112 YMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGN-LKLADFGLARSFSYD--HNNTLTNR 168
Y+ Q L GL Y H ++LH D+K N+L+ ++G+ L DFG A D + LT
Sbjct: 171 YLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGD 230
Query: 169 VI--TLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNG 205
I T + PE++LG + VD+WS C+ +LNG
Sbjct: 231 YIPGTETHMAPEVVLGRS-CDAKVDVWSSCCMMLHMLNG 268
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 36/262 (13%)
Query: 17 GEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGN 76
G VA+K I+ D + F + E ++ +L+H N+++L ++
Sbjct: 216 GNKVAVKCIKNDATAQAF----LAEASVMTQLRHSNLVQLLGVIVEE------------- 258
Query: 77 KYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMK---QLLTGLHYCHVNQVLHRD 132
+G Y+V EYM L D R +V C +K + + Y N +HRD
Sbjct: 259 --KGGLYIVTEYMAKG--SLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 314
Query: 133 IKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDM 192
+ N+L+ + K++DFGL + S + T ++ W P L K+ D+
Sbjct: 315 LAARNVLVSEDNVAKVSDFGLTKEASSTQD---TGKLPVKWTAPEA--LREKKFSTKSDV 369
Query: 193 WSVGCIFAELLN-GK---PILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHF-KP 247
WS G + E+ + G+ P +P K+ ++ K +++ +PD M H
Sbjct: 370 WSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM-DAPDGCPPAVYDVMKNCWHLDAA 428
Query: 248 SRTMKRRVREVFRHFDRHALEL 269
+R ++RE H H L L
Sbjct: 429 TRPTFLQLREQLEHIRTHELHL 450
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 20/186 (10%)
Query: 39 IREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLAD 98
IRE+ + L H N+I+L +V +P + + P G+ + ++ H L G
Sbjct: 69 IREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLD----RLRKHQGHFLLGTLS 124
Query: 99 RPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF- 157
R Y Q+ G+ Y + +HRD+ NLL+ +K+ DFGL R+
Sbjct: 125 R------------YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172
Query: 158 -SYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEA 215
+ DH +R + + PE L T + A D W G E+ G+ G N +
Sbjct: 173 QNDDHXVMQEHRKVPFAWCAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGS 231
Query: 216 EQLSKI 221
+ L KI
Sbjct: 232 QILHKI 237
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 24/205 (11%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+K IR E I E +++ KL H +++L + P
Sbjct: 34 VAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVCLEQAP-------------- 76
Query: 80 GSTYMVFEYMDHDLTG--LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSN 137
+VFE+M+H L + GL F + + G+ Y V+HRD+ N
Sbjct: 77 --ICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARN 133
Query: 138 LLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGC 197
L+ +K++DFG+ R D + T + + PE + ++Y D+WS G
Sbjct: 134 CLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE-VFSFSRYSSKSDVWSFGV 192
Query: 198 IFAELLN-GKPILPGKNEAEQLSKI 221
+ E+ + GK ++ +E + I
Sbjct: 193 LMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 40/224 (17%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D ++ I E++++K + +H+N+I L T GP
Sbjct: 104 VAVKMLKSDATEKDLS-DLISEMEMMKMIGKHKNIINLLGACTQDGP------------- 149
Query: 79 RGSTYMVFEYMD----HDLTGLADRPGLRFTV-----PQIKCYMKQLLT-------GLHY 122
Y++ EY + PGL ++ P+ + K L++ G+ Y
Sbjct: 150 ---LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEY 206
Query: 123 CHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSY-DHNNTLTNRVITLWYRPPELLL 181
+ +HRD+ N+L+ + +K+ADFGLAR + D+ TN + + + PE L
Sbjct: 207 LASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF 266
Query: 182 GATKYGPAVDMWSVGCIFAEL--LNGKPILPGKNEAEQLSKIFE 223
Y D+WS G + E+ L G P PG E+L K+ +
Sbjct: 267 DRI-YTHQSDVWSFGVLLWEIFTLGGSP-YPGV-PVEELFKLLK 307
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 112 YMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGN-LKLADFGLARSFSYD--HNNTLTNR 168
Y+ Q L GL Y H ++LH D+K N+L+ ++G+ L DFG A D + LT
Sbjct: 190 YLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGD 249
Query: 169 VI--TLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNG 205
I T + PE++LG + VD+WS C+ +LNG
Sbjct: 250 YIPGTETHMAPEVVLGRS-CDAKVDVWSSCCMMLHMLNG 287
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 20/186 (10%)
Query: 39 IREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLAD 98
IRE+ + L H N+I+L +V +P + + P G+ + ++ H L G
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLD----RLRKHQGHFLLGTLS 114
Query: 99 RPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF- 157
R Y Q+ G+ Y + +HRD+ NLL+ +K+ DFGL R+
Sbjct: 115 R------------YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 162
Query: 158 -SYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEA 215
+ DH +R + + PE L T + A D W G E+ G+ G N +
Sbjct: 163 QNDDHXVMQEHRKVPFAWCAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGS 221
Query: 216 EQLSKI 221
+ L KI
Sbjct: 222 QILHKI 227
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 86/205 (41%), Gaps = 24/205 (11%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+K I+ + E I E +++ KL H +++L + P
Sbjct: 54 VAIKTIKEGSMSED---DFIEEAEVMMKLSHPKLVQLYGVCLEQAP-------------- 96
Query: 80 GSTYMVFEYMDHDLTG--LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSN 137
+VFE+M+H L + GL F + + G+ Y V+HRD+ N
Sbjct: 97 --ICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARN 153
Query: 138 LLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGC 197
L+ +K++DFG+ R D + T + + PE + ++Y D+WS G
Sbjct: 154 CLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE-VFSFSRYSSKSDVWSFGV 212
Query: 198 IFAELLN-GKPILPGKNEAEQLSKI 221
+ E+ + GK ++ +E + I
Sbjct: 213 LMWEVFSEGKIPYENRSNSEVVEDI 237
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 20/186 (10%)
Query: 39 IREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLAD 98
IRE+ + L H N+I+L +V +P + + P G+ + ++ H L G
Sbjct: 69 IREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLD----RLRKHQGHFLLGTLS 124
Query: 99 RPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF- 157
R Y Q+ G+ Y + +HRD+ NLL+ +K+ DFGL R+
Sbjct: 125 R------------YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172
Query: 158 -SYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEA 215
+ DH +R + + PE L T + A D W G E+ G+ G N +
Sbjct: 173 QNDDHYVMQEHRKVPFAWCAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGS 231
Query: 216 EQLSKI 221
+ L KI
Sbjct: 232 QILHKI 237
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 24/205 (11%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+K IR E I E +++ KL H +++L + P
Sbjct: 32 VAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVCLEQAP-------------- 74
Query: 80 GSTYMVFEYMDHDLTG--LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSN 137
+VFE+M+H L + GL F + + G+ Y V+HRD+ N
Sbjct: 75 --ICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARN 131
Query: 138 LLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGC 197
L+ +K++DFG+ R D + T + + PE + ++Y D+WS G
Sbjct: 132 CLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE-VFSFSRYSSKSDVWSFGV 190
Query: 198 IFAELLN-GKPILPGKNEAEQLSKI 221
+ E+ + GK ++ +E + I
Sbjct: 191 LMWEVFSEGKIPYENRSNSEVVEDI 215
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 81/202 (40%), Gaps = 24/202 (11%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+VF R +VA+K R + ++E +ILK+ H N+++L + T P
Sbjct: 129 EVFSGRLRADNTLVAVKSCR-ETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQP- 186
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHV 125
Y+V E + D G R V + + G+ Y
Sbjct: 187 ---------------IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES 231
Query: 126 NQVLHRDIKGSNLLIDNEGNLKLADFGLARSFS---YDHNNTLTNRVITLWYRPPELLLG 182
+HRD+ N L+ + LK++DFG++R + Y + L +V W P L G
Sbjct: 232 KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGL-RQVPVKWTAPEALNYG 290
Query: 183 ATKYGPAVDMWSVGCIFAELLN 204
+Y D+WS G + E +
Sbjct: 291 --RYSSESDVWSFGILLWETFS 310
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 96/228 (42%), Gaps = 45/228 (19%)
Query: 7 QVFMAREI-------KTGEIVALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKE 58
QV MA + K VA+K ++ D+ E + E++++K + +H+N+I L
Sbjct: 50 QVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHKNIINLLG 108
Query: 59 IVTSPGPERDEQGRPDGNKYRGSTYMVFEYMD----HDLTGLADRPGLRFT-----VPQI 109
T GP Y++ EY + PG+ + VP+
Sbjct: 109 ACTQDGP----------------LYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEE 152
Query: 110 KCYMKQLLT-------GLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF-SYDH 161
+ K L++ G+ Y + +HRD+ N+L+ +K+ADFGLAR + D
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDX 212
Query: 162 NNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAEL--LNGKP 207
TN + + + PE L Y D+WS G + E+ L G P
Sbjct: 213 XKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 40/224 (17%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D ++ I E++++K + +H+N+I L T GP
Sbjct: 48 VAVKMLKSDATEKDLS-DLISEMEMMKMIGKHKNIINLLGACTQDGP------------- 93
Query: 79 RGSTYMVFEYMD----HDLTGLADRPGLRFTV-----PQIKCYMKQLLT-------GLHY 122
Y++ EY + PGL + P+ + K L++ G+ Y
Sbjct: 94 ---LYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEY 150
Query: 123 CHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSY-DHNNTLTNRVITLWYRPPELLL 181
+ +HRD+ N+L+ + +K+ADFGLAR + D+ TN + + + PE L
Sbjct: 151 LASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF 210
Query: 182 GATKYGPAVDMWSVGCIFAEL--LNGKPILPGKNEAEQLSKIFE 223
Y D+WS G + E+ L G P PG E+L K+ +
Sbjct: 211 DRI-YTHQSDVWSFGVLLWEIFTLGGSP-YPGV-PVEELFKLLK 251
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 20 VALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D E E F ++E ++K+++H N+++L + T P
Sbjct: 41 VAVKTLKEDTMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTREPP------------- 83
Query: 79 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYM-KQLLTGLHYCHVNQVLHRDIKGS 136
Y++ E+M + +L + + YM Q+ + + Y +HRD+
Sbjct: 84 ---FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 137 NLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG 196
N L+ +K+ADFGL+R + D + + PE L K+ D+W+ G
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFG 199
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKIFEL 224
+ E+ G PG + LS+++EL
Sbjct: 200 VLLWEIATYGMSPYPGID----LSQVYEL 224
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 80/195 (41%), Gaps = 27/195 (13%)
Query: 19 IVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
I +L +I + E F +RE +++ L H NV+ L I+ P
Sbjct: 54 IKSLSRITEMQQVEAF----LREGLLMRGLNHPNVLALIGIMLPP--------------- 94
Query: 79 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSN 137
G +++ YM H DL P TV + + Q+ G+ Y + +HRD+ N
Sbjct: 95 EGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARN 154
Query: 138 LLIDNEGNLKLADFGLARSF----SYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMW 193
++D +K+ADFGLAR Y R+ W L ++ D+W
Sbjct: 155 CMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALES--LQTYRFTTKSDVW 212
Query: 194 SVGCIFAELLN-GKP 207
S G + ELL G P
Sbjct: 213 SFGVLLWELLTRGAP 227
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 87/199 (43%), Gaps = 29/199 (14%)
Query: 12 REIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQG 71
REI I LK + ++ F + E I+ + H NVI L+ +VT P
Sbjct: 34 REIFVA-IKTLKSGYTEKQRRDF----LSEASIMGQFDHPNVIHLEGVVTKSTP------ 82
Query: 72 RPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLH 130
++ E+M++ L + +FTV Q+ ++ + G+ Y +H
Sbjct: 83 ----------VMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVH 132
Query: 131 RDIKGSNLLIDNEGNLKLADFGLARSFSYD-----HNNTLTNRVITLWYRPPELLLGATK 185
R + N+L+++ K++DFGL+R D + + L ++ W P + K
Sbjct: 133 RALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA--IQYRK 190
Query: 186 YGPAVDMWSVGCIFAELLN 204
+ A D+WS G + E+++
Sbjct: 191 FTSASDVWSYGIVMWEVMS 209
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 20/186 (10%)
Query: 39 IREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLAD 98
IRE+ + L H N+I+L +V +P + + P G+ + ++ H L G
Sbjct: 63 IREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLD----RLRKHQGHFLLGTLS 118
Query: 99 RPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF- 157
R Y Q+ G+ Y + +HRD+ NLL+ +K+ DFGL R+
Sbjct: 119 R------------YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 166
Query: 158 -SYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEA 215
+ DH +R + + PE L T + A D W G E+ G+ G N +
Sbjct: 167 QNDDHYVMQEHRKVPFAWCAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGS 225
Query: 216 EQLSKI 221
+ L KI
Sbjct: 226 QILHKI 231
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 20/186 (10%)
Query: 39 IREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLAD 98
IRE+ + L H N+I+L +V +P + + P G+ + ++ H L G
Sbjct: 63 IREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLD----RLRKHQGHFLLGTLS 118
Query: 99 RPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF- 157
R Y Q+ G+ Y + +HRD+ NLL+ +K+ DFGL R+
Sbjct: 119 R------------YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 166
Query: 158 -SYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEA 215
+ DH +R + + PE L T + A D W G E+ G+ G N +
Sbjct: 167 QNDDHYVMQEHRKVPFAWCAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGS 225
Query: 216 EQLSKI 221
+ L KI
Sbjct: 226 QILHKI 231
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 39/206 (18%)
Query: 18 EIVALKKIRMDNEKEGFPITAIREIKILK-KLQHENVIKLKEIVTSPGPERDEQGRPDGN 76
+ VA+K ++ ++ EG R +L+ +LQH NV+ L +VT P
Sbjct: 57 QAVAIKTLK--DKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQP----------- 103
Query: 77 KYRGSTYMVFEYMDH--------------DLTGLADRPGLRFTV--PQIKCYMKQLLTGL 120
M+F Y H D+ D ++ + P + Q+ G+
Sbjct: 104 -----LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGM 158
Query: 121 HYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARS-FSYDHNNTLTNRVITL-WYRPPE 178
Y + V+H+D+ N+L+ ++ N+K++D GL R ++ D+ L N ++ + W P
Sbjct: 159 EYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEA 218
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLN 204
++ G K+ D+WS G + E+ +
Sbjct: 219 IMYG--KFSIDSDIWSYGVVLWEVFS 242
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 116 LLTGLHYC-HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWY 174
++ GL Y ++++HRD+K SN+L+++ G +KL DFG++ N+ T Y
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG---TRSY 169
Query: 175 RPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILP--GKNEAEQLSKIFEL 224
PE L G T Y D+WS+G E+ G+ PI P K ++ IFEL
Sbjct: 170 MSPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFEL 221
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 40/224 (17%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D ++ I E++++K + +H+N+I L T GP
Sbjct: 63 VAVKMLKSDATEKDLS-DLISEMEMMKMIGKHKNIINLLGACTQDGP------------- 108
Query: 79 RGSTYMVFEYMD----HDLTGLADRPGLRFTV-----PQIKCYMKQLLT-------GLHY 122
Y++ EY + PGL + P+ + K L++ G+ Y
Sbjct: 109 ---LYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEY 165
Query: 123 CHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSY-DHNNTLTNRVITLWYRPPELLL 181
+ +HRD+ N+L+ + +K+ADFGLAR + D+ TN + + + PE L
Sbjct: 166 LASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF 225
Query: 182 GATKYGPAVDMWSVGCIFAEL--LNGKPILPGKNEAEQLSKIFE 223
Y D+WS G + E+ L G P PG E+L K+ +
Sbjct: 226 DRI-YTHQSDVWSFGVLLWEIFTLGGSP-YPGV-PVEELFKLLK 266
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 108/263 (41%), Gaps = 66/263 (25%)
Query: 41 EIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADR 99
EI+IL + QH N+I LK++ D KY Y+V E L D+
Sbjct: 65 EIEILLRYGQHPNIITLKDVY-------------DDGKY---VYVVTELXKGG--ELLDK 106
Query: 100 PGLR---FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLL-IDNEGN---LKLADFG 152
LR F+ + + + + Y H V+HRD+K SN+L +D GN +++ DFG
Sbjct: 107 I-LRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFG 165
Query: 153 LARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNG-KPILPG 211
A+ + N L T + PE +L Y A D+WS+G + L G P G
Sbjct: 166 FAKQLRAE-NGLLXTPCYTANFVAPE-VLERQGYDAACDIWSLGVLLYTXLTGYTPFANG 223
Query: 212 KNEA--EQLSKI----FELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRH 265
++ E L++I F L G W VS
Sbjct: 224 PDDTPEEILARIGSGKFSLSGG----YWNSVSDT-------------------------- 253
Query: 266 ALELLEKMLMLDPSQRISAKDAL 288
A +L+ K L +DP QR++A L
Sbjct: 254 AKDLVSKXLHVDPHQRLTAALVL 276
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 34/182 (18%)
Query: 40 REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-------- 91
RE ++L LQHE+++K + P MVFEYM H
Sbjct: 66 REAELLTNLQHEHIVKFYGVCGDGDP----------------LIMVFEYMKHGDLNKFLR 109
Query: 92 ----DLTGLAD----RPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNE 143
D L D + + Q+ Q+ +G+ Y +HRD+ N L+
Sbjct: 110 AHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGAN 169
Query: 144 GNLKLADFGLARS-FSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAEL 202
+K+ DFG++R +S D+ + ++ + + PPE ++ K+ D+WS G I E+
Sbjct: 170 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM-YRKFTTESDVWSFGVILWEI 228
Query: 203 LN 204
Sbjct: 229 FT 230
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 20 VALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D E E F ++E ++K+++H N+++L + T P
Sbjct: 41 VAVKTLKEDTMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTREPP------------- 83
Query: 79 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYM-KQLLTGLHYCHVNQVLHRDIKGS 136
Y++ E+M + +L + + YM Q+ + + Y +HRD+
Sbjct: 84 ---FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 137 NLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG 196
N L+ +K+ADFGL+R + D + + PE L K+ D+W+ G
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFG 199
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKIFEL 224
+ E+ G PG + LS+++EL
Sbjct: 200 VLLWEIATYGMSPYPGID----LSQVYEL 224
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 39/206 (18%)
Query: 18 EIVALKKIRMDNEKEGFPITAIREIKILK-KLQHENVIKLKEIVTSPGPERDEQGRPDGN 76
+ VA+K ++ ++ EG R +L+ +LQH NV+ L +VT P
Sbjct: 40 QAVAIKTLK--DKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQP----------- 86
Query: 77 KYRGSTYMVFEYMDH--------------DLTGLADRPGLRFTV--PQIKCYMKQLLTGL 120
M+F Y H D+ D ++ + P + Q+ G+
Sbjct: 87 -----LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGM 141
Query: 121 HYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARS-FSYDHNNTLTNRVITL-WYRPPE 178
Y + V+H+D+ N+L+ ++ N+K++D GL R ++ D+ L N ++ + W P
Sbjct: 142 EYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEA 201
Query: 179 LLLGATKYGPAVDMWSVGCIFAELLN 204
++ G K+ D+WS G + E+ +
Sbjct: 202 IMYG--KFSIDSDIWSYGVVLWEVFS 225
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 20 VALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D E E F ++E ++K+++H N+++L + T P
Sbjct: 42 VAVKTLKEDTMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTREPP------------- 84
Query: 79 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYM-KQLLTGLHYCHVNQVLHRDIKGS 136
Y++ E+M + +L + + YM Q+ + + Y +HRD+
Sbjct: 85 ---FYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 141
Query: 137 NLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG 196
N L+ +K+ADFGL+R + D + + PE L K+ D+W+ G
Sbjct: 142 NCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFG 200
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKIFEL 224
+ E+ G PG + LS+++EL
Sbjct: 201 VLLWEIATYGMSPYPGID----LSQVYEL 225
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 36/262 (13%)
Query: 17 GEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGN 76
G VA+K I+ D + F + E ++ +L+H N+++L ++
Sbjct: 44 GNKVAVKCIKNDATAQAF----LAEASVMTQLRHSNLVQLLGVIVEE------------- 86
Query: 77 KYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMK---QLLTGLHYCHVNQVLHRD 132
+G Y+V EYM L D R +V C +K + + Y N +HRD
Sbjct: 87 --KGGLYIVTEYMAKG--SLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 142
Query: 133 IKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDM 192
+ N+L+ + K++DFGL + S + T ++ W P L K+ D+
Sbjct: 143 LAARNVLVSEDNVAKVSDFGLTKEASSTQD---TGKLPVKWTAPEA--LREKKFSTKSDV 197
Query: 193 WSVGCIFAELLN-GK---PILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPS 248
WS G + E+ + G+ P +P K+ ++ K +++ +PD M H +
Sbjct: 198 WSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM-DAPDGCPPAVYEVMKNCWHLDAA 256
Query: 249 -RTMKRRVREVFRHFDRHALEL 269
R ++RE H H L L
Sbjct: 257 MRPSFLQLREQLEHIKTHELHL 278
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 20/186 (10%)
Query: 39 IREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLAD 98
IRE+ + L H N+I+L +V +P + + P G+ + ++ H L G
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLD----RLRKHQGHFLLGTLS 114
Query: 99 RPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF- 157
R Y Q+ G+ Y + +HRD+ NLL+ +K+ DFGL R+
Sbjct: 115 R------------YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 162
Query: 158 -SYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEA 215
+ DH +R + + PE L T + A D W G E+ G+ G N +
Sbjct: 163 QNDDHYVMQEHRKVPFAWCAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGS 221
Query: 216 EQLSKI 221
+ L KI
Sbjct: 222 QILHKI 227
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 29/193 (15%)
Query: 26 RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMV 85
RM +++ GF A++++++ V +++E+V G G G +
Sbjct: 76 RMKDKQTGFQ-CAVKKVRL-------EVFRVEELVACAGLSSPRIVPLYGAVREGPWVNI 127
Query: 86 FEYMDHDLTGLADRPGLRFTVPQIKC--------YMKQLLTGLHYCHVNQVLHRDIKGSN 137
F L + L + Q+ C Y+ Q L GL Y H ++LH D+K N
Sbjct: 128 F-------MELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADN 180
Query: 138 LLIDNEGN-LKLADFGLARSFSYD--HNNTLTNRVI--TLWYRPPELLLGATKYGPAVDM 192
+L+ ++G+ L DFG A D + LT I T + PE+++G VD+
Sbjct: 181 VLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG-KPCDAKVDI 239
Query: 193 WSVGCIFAELLNG 205
WS C+ +LNG
Sbjct: 240 WSSCCMMLHMLNG 252
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 20/186 (10%)
Query: 39 IREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLAD 98
IRE+ + L H N+I+L +V +P + + P G+ + ++ H L G
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLD----RLRKHQGHFLLGTLS 114
Query: 99 RPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF- 157
R Y Q+ G+ Y + +HRD+ NLL+ +K+ DFGL R+
Sbjct: 115 R------------YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 162
Query: 158 -SYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEA 215
+ DH +R + + PE L T + A D W G E+ G+ G N +
Sbjct: 163 QNDDHYVMQEHRKVPFAWCAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGS 221
Query: 216 EQLSKI 221
+ L KI
Sbjct: 222 QILHKI 227
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 20 VALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D E E F ++E ++K+++H N+++L + T P
Sbjct: 46 VAVKTLKEDTMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTREPP------------- 88
Query: 79 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYM-KQLLTGLHYCHVNQVLHRDIKGS 136
Y++ E+M + +L + + YM Q+ + + Y +HRD+
Sbjct: 89 ---FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 145
Query: 137 NLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG 196
N L+ +K+ADFGL+R + D + + PE L K+ D+W+ G
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFG 204
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKIFEL 224
+ E+ G PG + LS+++EL
Sbjct: 205 VLLWEIATYGMSPYPGID----LSQVYEL 229
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 29/193 (15%)
Query: 26 RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMV 85
RM +++ GF A++++++ V +++E+V G G G +
Sbjct: 92 RMKDKQTGFQ-CAVKKVRL-------EVFRVEELVACAGLSSPRIVPLYGAVREGPWVNI 143
Query: 86 FEYMDHDLTGLADRPGLRFTVPQIKC--------YMKQLLTGLHYCHVNQVLHRDIKGSN 137
F L + L + Q+ C Y+ Q L GL Y H ++LH D+K N
Sbjct: 144 F-------MELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADN 196
Query: 138 LLIDNEGN-LKLADFGLARSFSYD--HNNTLTNRVI--TLWYRPPELLLGATKYGPAVDM 192
+L+ ++G+ L DFG A D + LT I T + PE+++G VD+
Sbjct: 197 VLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG-KPCDAKVDI 255
Query: 193 WSVGCIFAELLNG 205
WS C+ +LNG
Sbjct: 256 WSSCCMMLHMLNG 268
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 101 GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYD 160
+ F +K ++ +L+ L Y +++HRD+K N+L+D G++ + DF +A +
Sbjct: 109 NVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168
Query: 161 HNNTLTNRVITLWYRPPELLLG--ATKYGPAVDMWSVGCIFAELLNGK 206
+T T Y PE+ Y AVD WS+G ELL G+
Sbjct: 169 --TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR 214
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 36/262 (13%)
Query: 17 GEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGN 76
G VA+K I+ D + F + E ++ +L+H N+++L ++
Sbjct: 35 GNKVAVKCIKNDATAQAF----LAEASVMTQLRHSNLVQLLGVIVEE------------- 77
Query: 77 KYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMK---QLLTGLHYCHVNQVLHRD 132
+G Y+V EYM L D R +V C +K + + Y N +HRD
Sbjct: 78 --KGGLYIVTEYMAKG--SLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 133
Query: 133 IKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDM 192
+ N+L+ + K++DFGL + S + T ++ W P L A + D+
Sbjct: 134 LAARNVLVSEDNVAKVSDFGLTKEASSTQD---TGKLPVKWTAPEALREAA--FSTKSDV 188
Query: 193 WSVGCIFAELLN-GK---PILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPS 248
WS G + E+ + G+ P +P K+ ++ K +++ +PD M H +
Sbjct: 189 WSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM-DAPDGCPPAVYEVMKNCWHLDAA 247
Query: 249 -RTMKRRVREVFRHFDRHALEL 269
R ++RE H H L L
Sbjct: 248 MRPSFLQLREQLEHIKTHELHL 269
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 29/193 (15%)
Query: 26 RMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMV 85
RM +++ GF A++++++ V +++E+V G G G +
Sbjct: 90 RMKDKQTGFQ-CAVKKVRL-------EVFRVEELVACAGLSSPRIVPLYGAVREGPWVNI 141
Query: 86 FEYMDHDLTGLADRPGLRFTVPQIKC--------YMKQLLTGLHYCHVNQVLHRDIKGSN 137
F L + L + Q+ C Y+ Q L GL Y H ++LH D+K N
Sbjct: 142 F-------MELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADN 194
Query: 138 LLIDNEGN-LKLADFGLARSFSYD--HNNTLTNRVI--TLWYRPPELLLGATKYGPAVDM 192
+L+ ++G+ L DFG A D + LT I T + PE+++G VD+
Sbjct: 195 VLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG-KPCDAKVDI 253
Query: 193 WSVGCIFAELLNG 205
WS C+ +LNG
Sbjct: 254 WSSCCMMLHMLNG 266
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Query: 116 LLTGLHYC-HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWY 174
++ GL Y ++++HRD+K SN+L+++ G +KL DFG++ N+ T Y
Sbjct: 175 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG---TRSY 231
Query: 175 RPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIF 222
PE L G T Y D+WS+G E+ G+ PI P +A++L +F
Sbjct: 232 MSPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIPP--PDAKELELMF 277
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 20 VALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D E E F ++E ++K+++H N+++L + T P
Sbjct: 46 VAVKTLKEDTMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTREPP------------- 88
Query: 79 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYM-KQLLTGLHYCHVNQVLHRDIKGS 136
Y++ E+M + +L + + YM Q+ + + Y +HRD+
Sbjct: 89 ---FYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 145
Query: 137 NLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG 196
N L+ +K+ADFGL+R + D + + PE L K+ D+W+ G
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFG 204
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKIFEL 224
+ E+ G PG + LS+++EL
Sbjct: 205 VLLWEIATYGMSPYPGID----LSQVYEL 229
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 36/262 (13%)
Query: 17 GEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGN 76
G VA+K I+ D + F + E ++ +L+H N+++L ++
Sbjct: 29 GNKVAVKCIKNDATAQAF----LAEASVMTQLRHSNLVQLLGVIVEE------------- 71
Query: 77 KYRGSTYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMK---QLLTGLHYCHVNQVLHRD 132
+G Y+V EYM L D R +V C +K + + Y N +HRD
Sbjct: 72 --KGGLYIVTEYMAKG--SLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 127
Query: 133 IKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDM 192
+ N+L+ + K++DFGL + S + T ++ W P L K+ D+
Sbjct: 128 LAARNVLVSEDNVAKVSDFGLTKEASSTQD---TGKLPVKWTAPEA--LREKKFSTKSDV 182
Query: 193 WSVGCIFAELLN-GK---PILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPS 248
WS G + E+ + G+ P +P K+ ++ K +++ +PD M H +
Sbjct: 183 WSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM-DAPDGCPPAVYEVMKNCWHLDAA 241
Query: 249 -RTMKRRVREVFRHFDRHALEL 269
R ++RE H H L L
Sbjct: 242 MRPSFLQLREQLEHIKTHELHL 263
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 20 VALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D E E F ++E ++K+++H N+++L + T P
Sbjct: 41 VAVKTLKEDTMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTREPP------------- 83
Query: 79 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYM-KQLLTGLHYCHVNQVLHRDIKGS 136
Y++ E+M + +L + + YM Q+ + + Y +HRD+
Sbjct: 84 ---FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 137 NLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG 196
N L+ +K+ADFGL+R + D + + PE L K+ D+W+ G
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFG 199
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKIFEL 224
+ E+ G PG + LS+++EL
Sbjct: 200 VLLWEIATYGMSPYPGID----LSQVYEL 224
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 20 VALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D E E F ++E ++K+++H N+++L + T P
Sbjct: 46 VAVKTLKEDTMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTREPP------------- 88
Query: 79 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYM-KQLLTGLHYCHVNQVLHRDIKGS 136
Y++ E+M + +L + + YM Q+ + + Y +HRD+
Sbjct: 89 ---FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 145
Query: 137 NLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG 196
N L+ +K+ADFGL+R + D + + PE L K+ D+W+ G
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFG 204
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKIFEL 224
+ E+ G PG + LS+++EL
Sbjct: 205 VLLWEIATYGMSPYPGID----LSQVYEL 229
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 20 VALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D E E F ++E ++K+++H N+++L + T P
Sbjct: 248 VAVKTLKEDTMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTREPP------------- 290
Query: 79 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYM-KQLLTGLHYCHVNQVLHRDIKGS 136
Y++ E+M + +L + + YM Q+ + + Y +HR++
Sbjct: 291 ---FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAAR 347
Query: 137 NLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG 196
N L+ +K+ADFGL+R + D + + PE L K+ D+W+ G
Sbjct: 348 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFG 406
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKIFEL 224
+ E+ G PG + LS+++EL
Sbjct: 407 VLLWEIATYGMSPYPGID----LSQVYEL 431
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 35/186 (18%)
Query: 78 YRGSTYMVFE--YMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKG 135
+R + ++V Y++H+ + L L F +++ YM L L H ++HRD+K
Sbjct: 89 FRKNDHVVIAMPYLEHE-SFLDILNSLSFQ--EVREYMLNLFKALKRIHQFGIVHRDVKP 145
Query: 136 SNLLIDNE-GNLKLADFGLAR---------------------------SFSYDHNNTLTN 167
SN L + L DFGLA+ S +
Sbjct: 146 SNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAP 205
Query: 168 RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIFELCG 226
R T +R PE+L A+DMWS G IF LL+G+ P ++ L++I + G
Sbjct: 206 RAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRG 265
Query: 227 SPDETI 232
S ETI
Sbjct: 266 S-RETI 270
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 20 VALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D E E F ++E ++K+++H N+++L + T P
Sbjct: 41 VAVKTLKEDTMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTREPP------------- 83
Query: 79 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYM-KQLLTGLHYCHVNQVLHRDIKGS 136
Y++ E+M + +L + + YM Q+ + + Y +HRD+
Sbjct: 84 ---FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 137 NLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG 196
N L+ +K+ADFGL+R + D + + PE L K+ D+W+ G
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFG 199
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKIFEL 224
+ E+ G PG + LS+++EL
Sbjct: 200 VLLWEIATYGMSPYPGID----LSQVYEL 224
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 112/257 (43%), Gaps = 57/257 (22%)
Query: 40 REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDL-TG--L 96
RE +I + L+H N+++L + ++ G F Y+ DL TG L
Sbjct: 79 REARICRLLKHPNIVRLHDSISEEG---------------------FHYLVFDLVTGGEL 117
Query: 97 ADRPGLR--FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNE---GNLKLADF 151
+ R ++ + Q+L +++ H + ++HRD+K NLL+ ++ +KLADF
Sbjct: 118 FEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADF 177
Query: 152 GLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPG 211
GLA + T Y PE +L YG VD+W+ G I LL G P
Sbjct: 178 GLAIEVQGEQQAWF-GFAGTPGYLSPE-VLRKDPYGKPVDIWACGVILYILLVGYPPFWD 235
Query: 212 KNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHALELLE 271
+++ + +I G+ D +P P ++ P A L+
Sbjct: 236 EDQHKLYQQI--KAGAYD---FPS----PEWDTVTPE-----------------AKNLIN 269
Query: 272 KMLMLDPSQRISAKDAL 288
+ML ++P++RI+A AL
Sbjct: 270 QMLTINPAKRITADQAL 286
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 20 VALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D E E F ++E ++K+++H N+++L + T P
Sbjct: 46 VAVKTLKEDTMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTREPP------------- 88
Query: 79 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYM-KQLLTGLHYCHVNQVLHRDIKGS 136
Y++ E+M + +L + + YM Q+ + + Y +HRD+
Sbjct: 89 ---FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 145
Query: 137 NLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG 196
N L+ +K+ADFGL+R + D + + PE L K+ D+W+ G
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFG 204
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKIFEL 224
+ E+ G PG + LS+++EL
Sbjct: 205 VLLWEIATYGMSPYPGID----LSQVYEL 229
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 91/211 (43%), Gaps = 14/211 (6%)
Query: 7 QVFMARE--IKTGEIVALKKIRMDNEKEGFPITAI--REIKILKKLQHENVIKLKEIVTS 62
+VF AR + E + ++M E+ + A RE ++ + + N++KL +
Sbjct: 62 RVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 121
Query: 63 PGPE---RDEQGRPDGNKYRGS----TYMVFEYMDHDLTGLADRPGLR-FTVPQIKCYMK 114
P + D N++ S T + D PG + + C +
Sbjct: 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIAR 181
Query: 115 QLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARS-FSYDHNNTLTNRVITLW 173
Q+ G+ Y + +HRD+ N L+ +K+ADFGL+R+ +S D+ N I +
Sbjct: 182 QVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIR 241
Query: 174 YRPPELLLGATKYGPAVDMWSVGCIFAELLN 204
+ PPE + +Y D+W+ G + E+ +
Sbjct: 242 WMPPESIF-YNRYTTESDVWAYGVVLWEIFS 271
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 79/201 (39%), Gaps = 22/201 (10%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+VF R +VA+K R + ++E +ILK+ H N+++L + T P
Sbjct: 129 EVFSGRLRADNTLVAVKSCR-ETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQP- 186
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHV 125
Y+V E + D G R V + + G+ Y
Sbjct: 187 ---------------IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES 231
Query: 126 NQVLHRDIKGSNLLIDNEGNLKLADFGLARSFS--YDHNNTLTNRVITLWYRPPELLLGA 183
+HRD+ N L+ + LK++DFG++R + + +V W P L G
Sbjct: 232 KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYG- 290
Query: 184 TKYGPAVDMWSVGCIFAELLN 204
+Y D+WS G + E +
Sbjct: 291 -RYSSESDVWSFGILLWETFS 310
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 20 VALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D E E F ++E ++K+++H N+++L + T P
Sbjct: 287 VAVKTLKEDTMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTREPP------------- 329
Query: 79 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYM-KQLLTGLHYCHVNQVLHRDIKGS 136
Y++ E+M + +L + + YM Q+ + + Y +HR++
Sbjct: 330 ---FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAAR 386
Query: 137 NLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG 196
N L+ +K+ADFGL+R + D + + PE L K+ D+W+ G
Sbjct: 387 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFG 445
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKIFEL 224
+ E+ G PG + LS+++EL
Sbjct: 446 VLLWEIATYGMSPYPGID----LSQVYEL 470
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 20 VALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D E E F ++E ++K+++H N+++L + T P
Sbjct: 45 VAVKTLKEDTMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTREPP------------- 87
Query: 79 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYM-KQLLTGLHYCHVNQVLHRDIKGS 136
Y++ E+M + +L + + YM Q+ + + Y +HRD+
Sbjct: 88 ---FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 144
Query: 137 NLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG 196
N L+ +K+ADFGL+R + D + + PE L K+ D+W+ G
Sbjct: 145 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFG 203
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKIFEL 224
+ E+ G PG + LS+++EL
Sbjct: 204 VLLWEIATYGMSPYPGID----LSQVYEL 228
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Query: 116 LLTGLHYC-HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWY 174
++ GL Y ++++HRD+K SN+L+++ G +KL DFG++ N+ T Y
Sbjct: 140 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG---TRSY 196
Query: 175 RPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIF 222
PE L G T Y D+WS+G E+ G+ PI P +A++L +F
Sbjct: 197 MSPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIPP--PDAKELELMF 242
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 20 VALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D E E F ++E ++K+++H N+++L + T P
Sbjct: 46 VAVKTLKEDTMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTREPP------------- 88
Query: 79 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYM-KQLLTGLHYCHVNQVLHRDIKGS 136
Y++ E+M + +L + + YM Q+ + + Y +HRD+
Sbjct: 89 ---FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 145
Query: 137 NLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG 196
N L+ +K+ADFGL+R + D + + PE L K+ D+W+ G
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFG 204
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKIFEL 224
+ E+ G PG + LS+++EL
Sbjct: 205 VLLWEIATYGMSPYPGID----LSQVYEL 229
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 20 VALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D E E F ++E ++K+++H N+++L + T P
Sbjct: 43 VAVKTLKEDTMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTREPP------------- 85
Query: 79 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYM-KQLLTGLHYCHVNQVLHRDIKGS 136
Y++ E+M + +L + + YM Q+ + + Y +HRD+
Sbjct: 86 ---FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 142
Query: 137 NLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG 196
N L+ +K+ADFGL+R + D + + PE L K+ D+W+ G
Sbjct: 143 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFG 201
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKIFEL 224
+ E+ G PG + LS+++EL
Sbjct: 202 VLLWEIATYGMSPYPGID----LSQVYEL 226
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 20 VALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D E E F ++E ++K+++H N+++L + T P
Sbjct: 43 VAVKTLKEDTMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTREPP------------- 85
Query: 79 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYM-KQLLTGLHYCHVNQVLHRDIKGS 136
Y++ E+M + +L + + YM Q+ + + Y +HRD+
Sbjct: 86 ---FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 142
Query: 137 NLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG 196
N L+ +K+ADFGL+R + D + + PE L K+ D+W+ G
Sbjct: 143 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFG 201
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKIFEL 224
+ E+ G PG + LS+++EL
Sbjct: 202 VLLWEIATYGMSPYPGID----LSQVYEL 226
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 10/111 (9%)
Query: 116 LLTGLHYC-HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWY 174
++ GL Y ++++HRD+K SN+L+++ G +KL DFG++ N+ T Y
Sbjct: 132 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG---TRSY 188
Query: 175 RPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIFEL 224
PE L G T Y D+WS+G E+ G+ PI G IFEL
Sbjct: 189 MSPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSM----AIFEL 234
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Query: 116 LLTGLHYC-HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWY 174
++ GL Y ++++HRD+K SN+L+++ G +KL DFG++ N+ T Y
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG---TRSY 169
Query: 175 RPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIF 222
PE L G T Y D+WS+G E+ G+ PI P +A++L +F
Sbjct: 170 MSPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIPP--PDAKELELMF 215
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 20 VALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D E E F ++E ++K+++H N+++L + T P
Sbjct: 42 VAVKTLKEDTMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTREPP------------- 84
Query: 79 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYM-KQLLTGLHYCHVNQVLHRDIKGS 136
Y++ E+M + +L + + YM Q+ + + Y +HRD+
Sbjct: 85 ---FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 141
Query: 137 NLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG 196
N L+ +K+ADFGL+R + D + + PE L K+ D+W+ G
Sbjct: 142 NCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFG 200
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKIFEL 224
+ E+ G PG + LS+++EL
Sbjct: 201 VLLWEIATYGMSPYPGID----LSQVYEL 225
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 72/179 (40%), Gaps = 23/179 (12%)
Query: 44 ILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGL 102
I+K H NV+ L I + GS +V YM H DL
Sbjct: 102 IMKDFSHPNVLSLLGICL---------------RSEGSPLVVLPYMKHGDLRNFIRNETH 146
Query: 103 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF----S 158
TV + + Q+ G+ Y + +HRD+ N ++D + +K+ADFGLAR
Sbjct: 147 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 206
Query: 159 YDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAE 216
Y +N ++ W L K+ D+WS G + EL+ G P P N +
Sbjct: 207 YSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 263
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Query: 116 LLTGLHYC-HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWY 174
++ GL Y ++++HRD+K SN+L+++ G +KL DFG++ N+ T Y
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG---TRSY 169
Query: 175 RPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIF 222
PE L G T Y D+WS+G E+ G+ PI P +A++L +F
Sbjct: 170 MSPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIPP--PDAKELELMF 215
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 72/179 (40%), Gaps = 23/179 (12%)
Query: 44 ILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGL 102
I+K H NV+ L I + GS +V YM H DL
Sbjct: 76 IMKDFSHPNVLSLLGICL---------------RSEGSPLVVLPYMKHGDLRNFIRNETH 120
Query: 103 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF----S 158
TV + + Q+ G+ Y + +HRD+ N ++D + +K+ADFGLAR
Sbjct: 121 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 180
Query: 159 YDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAE 216
Y +N ++ W L K+ D+WS G + EL+ G P P N +
Sbjct: 181 YSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 237
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 20 VALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D E E F ++E ++K+++H N+++L + T P
Sbjct: 43 VAVKTLKEDTMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTREPP------------- 85
Query: 79 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYM-KQLLTGLHYCHVNQVLHRDIKGS 136
Y++ E+M + +L + + YM Q+ + + Y +HRD+
Sbjct: 86 ---FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 142
Query: 137 NLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG 196
N L+ +K+ADFGL+R + D + + PE L K+ D+W+ G
Sbjct: 143 NCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFG 201
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKIFEL 224
+ E+ G PG + LS+++EL
Sbjct: 202 VLLWEIATYGMSPYPGID----LSQVYEL 226
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 20 VALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D E E F ++E ++K+++H N+++L + T P
Sbjct: 41 VAVKTLKEDTMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTREPP------------- 83
Query: 79 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYM-KQLLTGLHYCHVNQVLHRDIKGS 136
Y++ E+M + +L + + YM Q+ + + Y +HRD+
Sbjct: 84 ---FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 137 NLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG 196
N L+ +K+ADFGL+R + D + + PE L K+ D+W+ G
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFG 199
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKIFEL 224
+ E+ G PG + LS+++EL
Sbjct: 200 VLLWEIATYGMSPYPGID----LSQVYEL 224
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 20 VALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D E E F ++E ++K+++H N+++L + T P
Sbjct: 54 VAVKTLKEDTMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTREPP------------- 96
Query: 79 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYM-KQLLTGLHYCHVNQVLHRDIKGS 136
Y++ E+M + +L + + YM Q+ + + Y +HRD+
Sbjct: 97 ---FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 153
Query: 137 NLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG 196
N L+ +K+ADFGL+R + D + + PE L K+ D+W+ G
Sbjct: 154 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFG 212
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKIFEL 224
+ E+ G PG + LS+++EL
Sbjct: 213 VLLWEIATYGMSPYPGID----LSQVYEL 237
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 20 VALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D E E F ++E ++K+++H N+++L + T P
Sbjct: 245 VAVKTLKEDTMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTREPP------------- 287
Query: 79 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYM-KQLLTGLHYCHVNQVLHRDIKGS 136
Y++ E+M + +L + + YM Q+ + + Y +HR++
Sbjct: 288 ---FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAAR 344
Query: 137 NLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG 196
N L+ +K+ADFGL+R + D + + PE L K+ D+W+ G
Sbjct: 345 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFG 403
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKIFEL 224
+ E+ G PG + LS+++EL
Sbjct: 404 VLLWEIATYGMSPYPGID----LSQVYEL 428
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 71/176 (40%), Gaps = 23/176 (13%)
Query: 44 ILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGL 102
I+K H NV+ L I + GS +V YM H DL
Sbjct: 82 IMKDFSHPNVLSLLGICL---------------RSEGSPLVVLPYMKHGDLRNFIRNETH 126
Query: 103 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF----S 158
TV + + Q+ G+ Y + +HRD+ N ++D + +K+ADFGLAR
Sbjct: 127 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 186
Query: 159 YDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKN 213
Y +N ++ W L K+ D+WS G + EL+ G P P N
Sbjct: 187 YSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 240
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 96/222 (43%), Gaps = 29/222 (13%)
Query: 7 QVFMAREIKTGEIVALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGP 65
+V++ K VA+K ++ D E E F ++E ++K+++H N+++L + T P
Sbjct: 47 EVYVGVWKKYSLTVAVKTLKEDTMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTLEPP 102
Query: 66 ERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYM-KQLLTGLHYC 123
Y+V EYM + +L + YM Q+ + + Y
Sbjct: 103 ----------------FYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYL 146
Query: 124 HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
+HRD+ N L+ +K+ADFGL+R + D + + PE L
Sbjct: 147 EKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 206
Query: 184 TKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSKIFEL 224
T + D+W+ G + E+ G PG + LS++++L
Sbjct: 207 T-FSIKSDVWAFGVLLWEIATYGMSPYPGID----LSQVYDL 243
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 71/176 (40%), Gaps = 23/176 (13%)
Query: 44 ILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGL 102
I+K H NV+ L I + GS +V YM H DL
Sbjct: 79 IMKDFSHPNVLSLLGICL---------------RSEGSPLVVLPYMKHGDLRNFIRNETH 123
Query: 103 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF----S 158
TV + + Q+ G+ Y + +HRD+ N ++D + +K+ADFGLAR
Sbjct: 124 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 183
Query: 159 YDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKN 213
Y +N ++ W L K+ D+WS G + EL+ G P P N
Sbjct: 184 YSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 237
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 20 VALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D E E F ++E ++K+++H N+++L + T P
Sbjct: 41 VAVKTLKEDTMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTREPP------------- 83
Query: 79 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYM-KQLLTGLHYCHVNQVLHRDIKGS 136
Y++ E+M + +L + + YM Q+ + + Y +HRD+
Sbjct: 84 ---FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 137 NLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG 196
N L+ +K+ADFGL+R + D + + PE L K+ D+W+ G
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFG 199
Query: 197 CIFAELLN-GKPILPGKNEAEQLSKIFEL 224
+ E+ G PG + LS+++EL
Sbjct: 200 VLLWEIATYGMSPYPGID----LSQVYEL 224
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 71/176 (40%), Gaps = 23/176 (13%)
Query: 44 ILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGL 102
I+K H NV+ L I + GS +V YM H DL
Sbjct: 81 IMKDFSHPNVLSLLGICL---------------RSEGSPLVVLPYMKHGDLRNFIRNETH 125
Query: 103 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF----S 158
TV + + Q+ G+ Y + +HRD+ N ++D + +K+ADFGLAR
Sbjct: 126 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 185
Query: 159 YDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKN 213
Y +N ++ W L K+ D+WS G + EL+ G P P N
Sbjct: 186 YSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 239
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Query: 116 LLTGLHYC-HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWY 174
++ GL Y ++++HRD+K SN+L+++ G +KL DFG++ N+ T Y
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG---TRSY 169
Query: 175 RPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIF 222
PE L G T Y D+WS+G E+ G+ PI P +A++L +F
Sbjct: 170 MSPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIPP--PDAKELELMF 215
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Query: 116 LLTGLHYC-HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWY 174
++ GL Y ++++HRD+K SN+L+++ G +KL DFG++ N+ T Y
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG---TRSY 169
Query: 175 RPPELLLGATKYGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIF 222
PE L G T Y D+WS+G E+ G+ PI P +A++L +F
Sbjct: 170 MSPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIPP--PDAKELELMF 215
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 81/201 (40%), Gaps = 39/201 (19%)
Query: 22 LKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRG 80
LK +EKE + E+KI+ L QHEN++ L T GP
Sbjct: 84 LKSTAHADEKEAL----MSELKIMSHLGQHENIVNLLGACTHGGP--------------- 124
Query: 81 STYMVFEYMDH-DLTGLADR---PGLRFTVP------------QIKCYMKQLLTGLHYCH 124
++ EY + DL R PGL ++ + + Q+ G+ +
Sbjct: 125 -VLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLA 183
Query: 125 VNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLT-NRVITLWYRPPELLLGA 183
+HRD+ N+L+ N K+ DFGLAR D N + N + + + PE +
Sbjct: 184 SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDC 243
Query: 184 TKYGPAVDMWSVGCIFAELLN 204
Y D+WS G + E+ +
Sbjct: 244 V-YTVQSDVWSYGILLWEIFS 263
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 71/176 (40%), Gaps = 23/176 (13%)
Query: 44 ILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGL 102
I+K H NV+ L I + GS +V YM H DL
Sbjct: 84 IMKDFSHPNVLSLLGICL---------------RSEGSPLVVLPYMKHGDLRNFIRNETH 128
Query: 103 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF----S 158
TV + + Q+ G+ Y + +HRD+ N ++D + +K+ADFGLAR
Sbjct: 129 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 188
Query: 159 YDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKN 213
Y +N ++ W L K+ D+WS G + EL+ G P P N
Sbjct: 189 YSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 242
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 72/179 (40%), Gaps = 23/179 (12%)
Query: 44 ILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGL 102
I+K H NV+ L I + GS +V YM H DL
Sbjct: 103 IMKDFSHPNVLSLLGICL---------------RSEGSPLVVLPYMKHGDLRNFIRNETH 147
Query: 103 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF----S 158
TV + + Q+ G+ Y + +HRD+ N ++D + +K+ADFGLAR
Sbjct: 148 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 207
Query: 159 YDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAE 216
Y +N ++ W L K+ D+WS G + EL+ G P P N +
Sbjct: 208 YSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 264
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 71/176 (40%), Gaps = 23/176 (13%)
Query: 44 ILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGL 102
I+K H NV+ L I + GS +V YM H DL
Sbjct: 83 IMKDFSHPNVLSLLGICL---------------RSEGSPLVVLPYMKHGDLRNFIRNETH 127
Query: 103 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF----S 158
TV + + Q+ G+ Y + +HRD+ N ++D + +K+ADFGLAR
Sbjct: 128 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 187
Query: 159 YDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKN 213
Y +N ++ W L K+ D+WS G + EL+ G P P N
Sbjct: 188 YSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 241
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 71/176 (40%), Gaps = 23/176 (13%)
Query: 44 ILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGL 102
I+K H NV+ L I + GS +V YM H DL
Sbjct: 84 IMKDFSHPNVLSLLGICL---------------RSEGSPLVVLPYMKHGDLRNFIRNETH 128
Query: 103 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF----S 158
TV + + Q+ G+ Y + +HRD+ N ++D + +K+ADFGLAR
Sbjct: 129 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 188
Query: 159 YDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKN 213
Y +N ++ W L K+ D+WS G + EL+ G P P N
Sbjct: 189 YSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 242
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 73/178 (41%), Gaps = 27/178 (15%)
Query: 44 ILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGL 102
I+K H NV+ L I + GS +V YM H DL
Sbjct: 83 IMKDFSHPNVLSLLGICL---------------RSEGSPLVVLPYMKHGDLRNFIRNETH 127
Query: 103 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYD-- 160
TV + + Q+ G+ Y + +HRD+ N ++D + +K+ADFGLAR YD
Sbjct: 128 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKE 186
Query: 161 ----HNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKN 213
HN T ++ W L K+ D+WS G + EL+ G P P N
Sbjct: 187 XXSVHNKT-GAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 241
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 72/177 (40%), Gaps = 25/177 (14%)
Query: 44 ILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGL 102
I+K H NV+ L I + GS +V YM H DL
Sbjct: 143 IMKDFSHPNVLSLLGICL---------------RSEGSPLVVLPYMKHGDLRNFIRNETH 187
Query: 103 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARS-----F 157
TV + + Q+ G+ + + +HRD+ N ++D + +K+ADFGLAR F
Sbjct: 188 NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 247
Query: 158 SYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKN 213
HN T ++ W L K+ D+WS G + EL+ G P P N
Sbjct: 248 DSVHNKT-GAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 301
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 24/186 (12%)
Query: 20 VALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D E E F ++E ++K+++H N+++L + T P
Sbjct: 39 VAVKTLKEDTMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTREPP------------- 81
Query: 79 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYM-KQLLTGLHYCHVNQVLHRDIKGS 136
Y++ E+M + +L + + YM Q+ + + Y +HRD+
Sbjct: 82 ---FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 138
Query: 137 NLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG 196
N L+ +K+ADFGL+R + D + + PE L K+ D+W+ G
Sbjct: 139 NCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFG 197
Query: 197 CIFAEL 202
+ E+
Sbjct: 198 VLLWEI 203
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 25/180 (13%)
Query: 44 ILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGL 102
I+K H NV+ L I + GS +V YM H DL
Sbjct: 84 IMKDFSHPNVLSLLGICL---------------RSEGSPLVVLPYMKHGDLRNFIRNETH 128
Query: 103 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARS-----F 157
TV + + Q+ G+ + + +HRD+ N ++D + +K+ADFGLAR F
Sbjct: 129 NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 188
Query: 158 SYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAE 216
HN T ++ W L K+ D+WS G + EL+ G P P N +
Sbjct: 189 DSVHNKT-GAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 245
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 78/193 (40%), Gaps = 16/193 (8%)
Query: 22 LKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGP-----ERDEQGRPDG 75
LK +EKE + E+KI+ L QHEN++ L T GP E G
Sbjct: 69 LKSTAHADEKEAL----MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLN 124
Query: 76 NKYRGSTYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDI 133
R + M+ + D GL G + + + Q+ G+ + +HRD+
Sbjct: 125 FLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDV 184
Query: 134 KGSNLLIDNEGNLKLADFGLARSFSYDHNNTL--TNRVITLWYRPPELLLGATKYGPAVD 191
N+L+ N K+ DFGLAR D N + R+ W P + Y D
Sbjct: 185 AARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIF--DCVYTVQSD 242
Query: 192 MWSVGCIFAELLN 204
+WS G + E+ +
Sbjct: 243 VWSYGILLWEIFS 255
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 84/205 (40%), Gaps = 24/205 (11%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+K IR E I E +++ KL H +++L + P
Sbjct: 35 VAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVCLEQAP-------------- 77
Query: 80 GSTYMVFEYMDHDLTG--LADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSN 137
+V E+M+H L + GL F + + G+ Y V+HRD+ N
Sbjct: 78 --ICLVTEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARN 134
Query: 138 LLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGC 197
L+ +K++DFG+ R D + T + + PE + ++Y D+WS G
Sbjct: 135 CLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE-VFSFSRYSSKSDVWSFGV 193
Query: 198 IFAELLN-GKPILPGKNEAEQLSKI 221
+ E+ + GK ++ +E + I
Sbjct: 194 LMWEVFSEGKIPYENRSNSEVVEDI 218
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 25/180 (13%)
Query: 44 ILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGL 102
I+K H NV+ L I + GS +V YM H DL
Sbjct: 89 IMKDFSHPNVLSLLGICL---------------RSEGSPLVVLPYMKHGDLRNFIRNETH 133
Query: 103 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARS-----F 157
TV + + Q+ G+ + + +HRD+ N ++D + +K+ADFGLAR F
Sbjct: 134 NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 193
Query: 158 SYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAE 216
HN T ++ W L K+ D+WS G + EL+ G P P N +
Sbjct: 194 DSVHNKT-GAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 250
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 28/189 (14%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+K+I ++E++ F I E++ L ++ H N++KL +P E
Sbjct: 35 VAIKQIESESERKAF----IVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAE------G 84
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ---VLHRDIKGS 136
GS Y V P +T + Q G+ Y H Q ++HRD+K
Sbjct: 85 GSLYNVLH---------GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPP 135
Query: 137 NLLIDNEGN-LKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSV 195
NLL+ G LK+ DFG A D +TN + + PE+ G + Y D++S
Sbjct: 136 NLLLVAGGTVLKICDFGTA----CDIQTHMTNNKGSAAWMAPEVFEG-SNYSEKCDVFSW 190
Query: 196 GCIFAELLN 204
G I E++
Sbjct: 191 GIILWEVIT 199
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 72/177 (40%), Gaps = 25/177 (14%)
Query: 44 ILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGL 102
I+K H NV+ L I + GS +V YM H DL
Sbjct: 85 IMKDFSHPNVLSLLGICL---------------RSEGSPLVVLPYMKHGDLRNFIRNETH 129
Query: 103 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARS-----F 157
TV + + Q+ G+ + + +HRD+ N ++D + +K+ADFGLAR F
Sbjct: 130 NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 189
Query: 158 SYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKN 213
HN T ++ W L K+ D+WS G + EL+ G P P N
Sbjct: 190 DSVHNKT-GAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 243
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 72/177 (40%), Gaps = 25/177 (14%)
Query: 44 ILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGL 102
I+K H NV+ L I + GS +V YM H DL
Sbjct: 85 IMKDFSHPNVLSLLGICL---------------RSEGSPLVVLPYMKHGDLRNFIRNETH 129
Query: 103 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARS-----F 157
TV + + Q+ G+ + + +HRD+ N ++D + +K+ADFGLAR F
Sbjct: 130 NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEF 189
Query: 158 SYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKN 213
HN T ++ W L K+ D+WS G + EL+ G P P N
Sbjct: 190 DSVHNKT-GAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 243
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 72/177 (40%), Gaps = 25/177 (14%)
Query: 44 ILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGL 102
I+K H NV+ L I + GS +V YM H DL
Sbjct: 84 IMKDFSHPNVLSLLGICL---------------RSEGSPLVVLPYMKHGDLRNFIRNETH 128
Query: 103 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARS-----F 157
TV + + Q+ G+ + + +HRD+ N ++D + +K+ADFGLAR F
Sbjct: 129 NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 188
Query: 158 SYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKN 213
HN T ++ W L K+ D+WS G + EL+ G P P N
Sbjct: 189 DSVHNKT-GAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 242
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 28/189 (14%)
Query: 20 VALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYR 79
VA+K+I ++E++ F I E++ L ++ H N++KL +P E
Sbjct: 34 VAIKQIESESERKAF----IVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAE------G 83
Query: 80 GSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQ---VLHRDIKGS 136
GS Y V P +T + Q G+ Y H Q ++HRD+K
Sbjct: 84 GSLYNVLH---------GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPP 134
Query: 137 NLLIDNEGN-LKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSV 195
NLL+ G LK+ DFG A D +TN + + PE+ G + Y D++S
Sbjct: 135 NLLLVAGGTVLKICDFGTA----CDIQTHMTNNKGSAAWMAPEVFEG-SNYSEKCDVFSW 189
Query: 196 GCIFAELLN 204
G I E++
Sbjct: 190 GIILWEVIT 198
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 24/186 (12%)
Query: 20 VALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D E E F ++E ++K+++H N+++L + T P
Sbjct: 39 VAVKTLKEDTMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTREPP------------- 81
Query: 79 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYM-KQLLTGLHYCHVNQVLHRDIKGS 136
Y++ E+M + +L + + YM Q+ + + Y +HRD+
Sbjct: 82 ---FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 138
Query: 137 NLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG 196
N L+ +K+ADFGL+R + D + + PE L K+ D+W+ G
Sbjct: 139 NCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFG 197
Query: 197 CIFAEL 202
+ E+
Sbjct: 198 VLLWEI 203
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 116 LLTGLHYC-HVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWY 174
++ GL Y ++++HRD+K SN+L+++ G +KL DFG++ + N T Y
Sbjct: 116 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVG---TRSY 172
Query: 175 RPPELLLGATKYGPAVDMWSVGCIFAELLNGK 206
PE L G T Y D+WS+G E+ G+
Sbjct: 173 MSPERLQG-THYSVQSDIWSMGLSLVEMAVGR 203
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 25/180 (13%)
Query: 44 ILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGL 102
I+K H NV+ L I + GS +V YM H DL
Sbjct: 82 IMKDFSHPNVLSLLGICL---------------RSEGSPLVVLPYMKHGDLRNFIRNETH 126
Query: 103 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARS-----F 157
TV + + Q+ G+ + + +HRD+ N ++D + +K+ADFGLAR F
Sbjct: 127 NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 186
Query: 158 SYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAE 216
HN T ++ W L K+ D+WS G + EL+ G P P N +
Sbjct: 187 DSVHNKT-GAKLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 243
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 103 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARS---FSY 159
+F + ++ +Q G+ Y H ++HRD+K +N+ + + +K+ DFGLA +S
Sbjct: 116 KFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175
Query: 160 DHNNTLTNRVITLWYRPPELLLGATK-YGPAVDMWSVGCIFAELLNGKPILPGKNEAEQL 218
H + I LW P + + + Y D+++ G + EL+ G+ N +Q
Sbjct: 176 SHQFEQLSGSI-LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ- 233
Query: 219 SKIFELCG----SPD 229
I E+ G SPD
Sbjct: 234 --IIEMVGRGSLSPD 246
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 103 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARS---FSY 159
+F + ++ +Q G+ Y H ++HRD+K +N+ + + +K+ DFGLA +S
Sbjct: 116 KFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175
Query: 160 DHNNTLTNRVITLWYRPPELLLGATK-YGPAVDMWSVGCIFAELLNGKPILPGKNEAEQL 218
H + I LW P + + + Y D+++ G + EL+ G+ N +Q
Sbjct: 176 SHQFEQLSGSI-LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ- 233
Query: 219 SKIFELCG----SPD 229
I E+ G SPD
Sbjct: 234 --IIEMVGRGSLSPD 246
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN 163
T+ + CY Q+ G+ + + +HRD+ N+L+ + +K+ DFGLAR D +
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 204
Query: 164 TLTNRV-ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSK 220
+ L + PE + Y D+WS G + E+ + G PG E+ +
Sbjct: 205 VRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 262
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN 163
T+ + CY Q+ G+ + + +HRD+ N+L+ + +K+ DFGLAR D +
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 195
Query: 164 TLTNRV-ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSK 220
+ L + PE + Y D+WS G + E+ + G PG E+ +
Sbjct: 196 VRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 253
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN 163
T+ + CY Q+ G+ + + +HRD+ N+L+ + +K+ DFGLAR D +
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 204
Query: 164 TLTNRV-ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSK 220
+ L + PE + Y D+WS G + E+ + G PG E+ +
Sbjct: 205 VRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 262
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN 163
T+ + CY Q+ G+ + + +HRD+ N+L+ + +K+ DFGLAR D +
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 195
Query: 164 TLTNRV-ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSK 220
+ L + PE + Y D+WS G + E+ + G PG E+ +
Sbjct: 196 VRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 253
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 24/186 (12%)
Query: 20 VALKKIRMDN-EKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
VA+K ++ D E E F ++E ++K+++H N+++L + T P
Sbjct: 39 VAVKTLKEDTMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTREPP------------- 81
Query: 79 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYM-KQLLTGLHYCHVNQVLHRDIKGS 136
Y++ E+M + +L + + YM Q+ + + Y +HRD+
Sbjct: 82 ---FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 138
Query: 137 NLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG 196
N L+ +K+ADFGL+R + D + + PE L K+ D+W+ G
Sbjct: 139 NCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFG 197
Query: 197 CIFAEL 202
+ E+
Sbjct: 198 VLLWEI 203
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN 163
T+ + CY Q+ G+ + + +HRD+ N+L+ + +K+ DFGLAR D +
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 256
Query: 164 TLTNRV-ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSK 220
+ L + PE + Y D+WS G + E+ + G PG E+ +
Sbjct: 257 VRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 314
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN 163
T+ + CY Q+ G+ + + +HRD+ N+L+ + +K+ DFGLAR D +
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 254
Query: 164 TLTNRV-ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSK 220
+ L + PE + Y D+WS G + E+ + G PG E+ +
Sbjct: 255 VRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 312
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 103 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLA---RSFSY 159
+F + ++ +Q G+ Y H ++HRD+K +N+ + + +K+ DFGLA +S
Sbjct: 104 KFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSG 163
Query: 160 DHNNTLTNRVITLWYRPPELLLGATK-YGPAVDMWSVGCIFAELLNGKPILPGKNEAEQL 218
H + I LW P + + + Y D+++ G + EL+ G+ N +Q
Sbjct: 164 SHQFEQLSGSI-LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ- 221
Query: 219 SKIFELCG----SPD 229
I E+ G SPD
Sbjct: 222 --IIEMVGRGSLSPD 234
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN 163
T+ + CY Q+ G+ + + +HRD+ N+L+ + +K+ DFGLAR D +
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDX 204
Query: 164 TLTNRV-ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSK 220
+ L + PE + Y D+WS G + E+ + G PG E+ +
Sbjct: 205 VRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 262
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 78/195 (40%), Gaps = 33/195 (16%)
Query: 22 LKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRG 80
LK +EKE + E+KI+ L QHEN++ L T GP
Sbjct: 84 LKSTAHADEKEAL----MSELKIMSHLGQHENIVNLLGACTHGGP--------------- 124
Query: 81 STYMVFEYMDH-DLTGLADRP---------GLRFTVPQIKCYMKQLLTGLHYCHVNQVLH 130
++ EY + DL R G + + + Q+ G+ + +H
Sbjct: 125 -VLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIH 183
Query: 131 RDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLT-NRVITLWYRPPELLLGATKYGPA 189
RD+ N+L+ N K+ DFGLAR D N + N + + + PE + Y
Sbjct: 184 RDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV-YTVQ 242
Query: 190 VDMWSVGCIFAELLN 204
D+WS G + E+ +
Sbjct: 243 SDVWSYGILLWEIFS 257
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN 163
T+ + CY Q+ G+ + + +HRD+ N+L+ + +K+ DFGLAR D +
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249
Query: 164 TLTNRV-ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSK 220
+ L + PE + Y D+WS G + E+ + G PG E+ +
Sbjct: 250 VRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 307
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 36/205 (17%)
Query: 21 ALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGN---K 77
A+K+IR+ N +E +RE+K L KL+H PG R + N K
Sbjct: 34 AIKRIRLPN-RELAREKVMREVKALAKLEH------------PGIVRYFNAWLEKNTTEK 80
Query: 78 YRGSTYMVFEYMDHDLT---GLADRPGLRFTVPQIK---CY--MKQLLTGLHYCHVNQVL 129
+ S+ V+ Y+ L L D R T+ + + C Q+ + + H ++
Sbjct: 81 LQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLM 140
Query: 130 HRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTL-----------TNRVITLWYRPPE 178
HRD+K SN+ + +K+ DFGL + D T +V T Y PE
Sbjct: 141 HRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPE 200
Query: 179 LLLGATKYGPAVDMWSVGCIFAELL 203
+ G + Y VD++S+G I ELL
Sbjct: 201 QIHGNS-YSHKVDIFSLGLILFELL 224
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN 163
T+ + CY Q+ G+ + + +HRD+ N+L+ + +K+ DFGLAR D +
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 247
Query: 164 TLTNRV-ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSK 220
+ L + PE + Y D+WS G + E+ + G PG E+ +
Sbjct: 248 VRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 305
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN 163
T+ + CY Q+ G+ + + +HRD+ N+L+ + +K+ DFGLAR D +
Sbjct: 147 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 206
Query: 164 TLTNRV-ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSK 220
+ L + PE + Y D+WS G + E+ + G PG E+ +
Sbjct: 207 VRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 264
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN 163
T+ + CY Q+ G+ + + +HRD+ N+L+ + +K+ DFGLAR D +
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 195
Query: 164 TLTNRV-ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSK 220
+ L + PE + Y D+WS G + E+ + G PG E+ +
Sbjct: 196 VRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 253
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 107/269 (39%), Gaps = 49/269 (18%)
Query: 38 AIREIKILKKLQ-HENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGL 96
RE++ L + Q ++N+++L E D ++ Y+VFE +
Sbjct: 57 VFREVETLYQCQGNKNILELIEFF------------EDDTRF----YLVFEKLQGGSILA 100
Query: 97 ADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNL---KLADFGL 153
+ F + ++ + L + H + HRD+K N+L ++ + K+ DF L
Sbjct: 101 HIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDL 160
Query: 154 ARSFSYDHNNT------LTNRVITLWYRPPELLL----GATKYGPAVDMWSVGCIFAELL 203
+++ T LT + Y PE++ AT Y D+WS+G + +L
Sbjct: 161 GSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIML 220
Query: 204 NGKPILPGKNEAEQLSKIFELCGSPD----ETIWPGVSKMPAYNHFKPSRTMKRRVREVF 259
+G P G A+ E+C E+I G + P + +
Sbjct: 221 SGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKD---------------W 265
Query: 260 RHFDRHALELLEKMLMLDPSQRISAKDAL 288
H A +L+ K+L+ D QR+SA L
Sbjct: 266 AHISSEAKDLISKLLVRDAKQRLSAAQVL 294
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 78/195 (40%), Gaps = 33/195 (16%)
Query: 22 LKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRG 80
LK +EKE + E+KI+ L QHEN++ L T GP
Sbjct: 76 LKSTAHADEKEAL----MSELKIMSHLGQHENIVNLLGACTHGGP--------------- 116
Query: 81 STYMVFEYMDH-DLTGLADRP---------GLRFTVPQIKCYMKQLLTGLHYCHVNQVLH 130
++ EY + DL R G + + + Q+ G+ + +H
Sbjct: 117 -VLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIH 175
Query: 131 RDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLT-NRVITLWYRPPELLLGATKYGPA 189
RD+ N+L+ N K+ DFGLAR D N + N + + + PE + Y
Sbjct: 176 RDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV-YTVQ 234
Query: 190 VDMWSVGCIFAELLN 204
D+WS G + E+ +
Sbjct: 235 SDVWSYGILLWEIFS 249
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN 163
T+ + CY Q+ G+ + + +HRD+ N+L+ + +K+ DFGLAR D +
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 195
Query: 164 TLTNRV-ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSK 220
+ L + PE + Y D+WS G + E+ + G PG E+ +
Sbjct: 196 VRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 253
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN 163
T+ + CY Q+ G+ + + +HRD+ N+L+ + +K+ DFGLAR D +
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 204
Query: 164 TLTNRV-ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSK 220
+ L + PE + Y D+WS G + E+ + G PG E+ +
Sbjct: 205 VRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 262
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 44/213 (20%)
Query: 12 REIKTGEIVALKKIRMD-NEKEGFPITAIR-EIKILKKLQHENVIKLKEIVTSPGPERDE 69
R G+ VA+K R D +E I +R E K+ L+H N+I L+ +
Sbjct: 25 RAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLK------- 77
Query: 70 QGRPDGNKYRGSTYMVFEY-----MDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCH 124
+ +V E+ ++ L+G P + + Q+ G++Y H
Sbjct: 78 ---------EPNLCLVMEFARGGPLNRVLSGKRIPPDILVN------WAVQIARGMNYLH 122
Query: 125 ---VNQVLHRDIKGSNLLIDNEGN--------LKLADFGLARSFSYDHNNTLTNRVITLW 173
+ ++HRD+K SN+LI + LK+ DFGLAR + H T +
Sbjct: 123 DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW---HRTTKMSAAGAYA 179
Query: 174 YRPPELLLGATKYGPAVDMWSVGCIFAELLNGK 206
+ PE ++ A+ + D+WS G + ELL G+
Sbjct: 180 WMAPE-VIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN 163
T+ + CY Q+ G+ + + +HRD+ N+L+ + +K+ DFGLAR D +
Sbjct: 182 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 241
Query: 164 TLTNRV-ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSK 220
+ L + PE + Y D+WS G + E+ + G PG E+ +
Sbjct: 242 VRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 299
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 31/203 (15%)
Query: 14 IKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRP 73
+ G +VA+K+++ + +G + E++++ H N+++L+ +P ER
Sbjct: 59 LADGTLVAVKRLK-EERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP-TER------ 110
Query: 74 DGNKYRGSTYMVFEYMDHDLTG--LADRPGLRFTVPQIKCYMKQLLT-----GLHYCHVN 126
+V+ YM + L +RP + P + +Q + GL Y H +
Sbjct: 111 ---------LLVYPYMANGSVASCLRERPE---SQPPLDWPKRQRIALGSARGLAYLHDH 158
Query: 127 ---QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
+++HRD+K +N+L+D E + DFGLA+ Y + T+ + PE L
Sbjct: 159 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPE-YLST 217
Query: 184 TKYGPAVDMWSVGCIFAELLNGK 206
K D++ G + EL+ G+
Sbjct: 218 GKSSEKTDVFGYGVMLLELITGQ 240
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN 163
T+ + CY Q+ G+ + + +HRD+ N+L+ + +K+ DFGLAR D +
Sbjct: 141 LTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 200
Query: 164 TLTNRV-ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSK 220
+ L + PE + Y D+WS G + E+ + G PG E+ +
Sbjct: 201 VRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 258
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 92/224 (41%), Gaps = 34/224 (15%)
Query: 83 YMVFEYM--DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLI 140
Y+VFE M L+ + R F + ++ + + L + H + HRD+K N+L
Sbjct: 87 YLVFEKMRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILC 144
Query: 141 DNEGNL---KLADFGLARSFSYDHNNT------LTNRVITLWYRPPELLLG----ATKYG 187
++ + K+ DFGL + + + L + Y PE++ A+ Y
Sbjct: 145 EHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYD 204
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
D+WS+G I LL+G P G+ CGS + W PA +
Sbjct: 205 KRCDLWSLGVILYILLSGYPPFVGR------------CGS--DCGWDRGEACPACQNMLF 250
Query: 248 SRTMKRRVR---EVFRHFDRHALELLEKMLMLDPSQRISAKDAL 288
+ + + + H A +L+ K+L+ D QR+SA L
Sbjct: 251 ESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVL 294
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 30/207 (14%)
Query: 10 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDE 69
MA IKT K D+ +E F ++E +++ H +++KL ++T
Sbjct: 39 MAVAIKT-----CKNCTSDSVREKF----LQEALTMRQFDHPHIVKLIGVITE------- 82
Query: 70 QGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQV 128
+++ E +L + + Y QL T L Y +
Sbjct: 83 ----------NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 132
Query: 129 LHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGP 188
+HRDI N+L+ + +KL DFGL+R + + + + PE + ++
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPE-SINFRRFTS 191
Query: 189 AVDMWSVG-CIFAELLNG-KPILPGKN 213
A D+W G C++ L++G KP KN
Sbjct: 192 ASDVWMFGVCMWEILMHGVKPFQGVKN 218
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 77/199 (38%), Gaps = 37/199 (18%)
Query: 22 LKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRG 80
LK +EKE + E+KI+ L QHEN++ L T GP
Sbjct: 84 LKSTAHADEKEAL----MSELKIMSHLGQHENIVNLLGACTHGGP--------------- 124
Query: 81 STYMVFEYMDH-DLTGLADR--------PGLRFTVPQIKC-----YMKQLLTGLHYCHVN 126
++ EY + DL R P + + Q+ G+ +
Sbjct: 125 -VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASK 183
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLT-NRVITLWYRPPELLLGATK 185
+HRD+ N+L+ N K+ DFGLAR D N + N + + + PE +
Sbjct: 184 NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV- 242
Query: 186 YGPAVDMWSVGCIFAELLN 204
Y D+WS G + E+ +
Sbjct: 243 YTVQSDVWSYGILLWEIFS 261
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 2/130 (1%)
Query: 107 PQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLT 166
P+ ++Q+ + L H HRD+K N+L+ + L DFG+A + + + L
Sbjct: 134 PRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLG 193
Query: 167 NRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCG 226
N V TL+Y PE + D++++ C+ E L G P G + + I +
Sbjct: 194 NTVGTLYYXAPE-RFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAIP 252
Query: 227 SPDETIWPGV 236
P T+ PG+
Sbjct: 253 RP-STVRPGI 261
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 78/199 (39%), Gaps = 37/199 (18%)
Query: 22 LKKIRMDNEKEGFPITAIREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRG 80
LK +EKE + E+KI+ L QHEN++ L T GP
Sbjct: 84 LKSTAHADEKEAL----MSELKIMSHLGQHENIVNLLGACTHGGP--------------- 124
Query: 81 STYMVFEYMDH-DLTGLADR--------PGLRF-----TVPQIKCYMKQLLTGLHYCHVN 126
++ EY + DL R P + + + Q+ G+ +
Sbjct: 125 -VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK 183
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLT-NRVITLWYRPPELLLGATK 185
+HRD+ N+L+ N K+ DFGLAR D N + N + + + PE +
Sbjct: 184 NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV- 242
Query: 186 YGPAVDMWSVGCIFAELLN 204
Y D+WS G + E+ +
Sbjct: 243 YTVQSDVWSYGILLWEIFS 261
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 103 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFS-YDH 161
+F + ++ +Q G+ Y H ++HRD+K +N+ + + +K+ DFGLA S +
Sbjct: 128 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG 187
Query: 162 NNTLTNRVITLWYRPPELLLGATK--YGPAVDMWSVGCIFAELLNGKPILPGKNEAEQL 218
++ ++ + PE++ K Y D+++ G + EL+ G+ N +Q+
Sbjct: 188 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 246
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 103 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFS-YDH 161
+F + ++ +Q G+ Y H ++HRD+K +N+ + + +K+ DFGLA S +
Sbjct: 120 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG 179
Query: 162 NNTLTNRVITLWYRPPELLLGATK--YGPAVDMWSVGCIFAELLNGKPILPGKNEAEQL 218
++ ++ + PE++ K Y D+++ G + EL+ G+ N +Q+
Sbjct: 180 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 238
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 30/207 (14%)
Query: 10 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDE 69
MA IKT K D+ +E F ++E +++ H +++KL ++T
Sbjct: 419 MAVAIKT-----CKNCTSDSVREKF----LQEALTMRQFDHPHIVKLIGVITE------- 462
Query: 70 QGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQV 128
+++ E +L + + Y QL T L Y +
Sbjct: 463 ----------NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 512
Query: 129 LHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGP 188
+HRDI N+L+ + +KL DFGL+R + + + + PE + ++
Sbjct: 513 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFRRFTS 571
Query: 189 AVDMWSVG-CIFAELLNG-KPILPGKN 213
A D+W G C++ L++G KP KN
Sbjct: 572 ASDVWMFGVCMWEILMHGVKPFQGVKN 598
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 103 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFS-YDH 161
+F + ++ +Q G+ Y H ++HRD+K +N+ + + +K+ DFGLA S +
Sbjct: 127 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 186
Query: 162 NNTLTNRVITLWYRPPELLLGATK--YGPAVDMWSVGCIFAELLNGKPILPGKNEAEQL 218
++ ++ + PE++ K Y D+++ G + EL+ G+ N +Q+
Sbjct: 187 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 245
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 103 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFS-YDH 161
+F + ++ +Q G+ Y H ++HRD+K +N+ + + +K+ DFGLA S +
Sbjct: 128 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 187
Query: 162 NNTLTNRVITLWYRPPELLLGATK--YGPAVDMWSVGCIFAELLNGKPILPGKNEAEQL 218
++ ++ + PE++ K Y D+++ G + EL+ G+ N +Q+
Sbjct: 188 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 246
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 53/134 (39%), Gaps = 29/134 (21%)
Query: 79 RGSTYMVFEYMD--HDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGS 136
R +V E +D + + DR FT + MK + + Y H + HRD+K
Sbjct: 87 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 146
Query: 137 NLLIDNE---GNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMW 193
NLL ++ LKL DFG A+ + KY + DMW
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAKETT------------------------GEKYDKSCDMW 182
Query: 194 SVGCIFAELLNGKP 207
S+G I LL G P
Sbjct: 183 SLGVIMYILLCGYP 196
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 128 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLL--GATK 185
V+HRD+K SN+L+D G +KL DFG++ D + Y PE + TK
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAA--YMAPERIDPPDPTK 203
Query: 186 --YGPAVDMWSVGCIFAELLNGK-PILPGKNEAEQLSKIFE 223
Y D+WS+G EL G+ P K + E L+K+ +
Sbjct: 204 PDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ 244
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 82/205 (40%), Gaps = 38/205 (18%)
Query: 42 IKILKKLQHENVIKLKEIVTSPGPERDEQGR---------PDGNKYRGSTYMVFEYMDHD 92
+K+ +N I K I P E D R DG R +V EY +
Sbjct: 41 VKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADG---RMEYLLVMEYYPNG 97
Query: 93 LTGLADRPGLRFTVPQIKCYMKQLLT-GLHYCHVN---------QVLHRDIKGSNLLIDN 142
L L + C + +T GL Y H + HRD+ N+L+ N
Sbjct: 98 --SLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKN 155
Query: 143 EGNLKLADFGLARSFS-------YDHNNTLTNRVITLWYRPPELLLGATKYGPA------ 189
+G ++DFGL+ + + +N + V T+ Y PE+L GA
Sbjct: 156 DGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQ 215
Query: 190 VDMWSVGCIFAEL-LNGKPILPGKN 213
VDM+++G I+ E+ + + PG++
Sbjct: 216 VDMYALGLIYWEIFMRCTDLFPGES 240
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 103 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFS-YDH 161
+F + ++ +Q G+ Y H ++HRD+K +N+ + + +K+ DFGLA S +
Sbjct: 100 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG 159
Query: 162 NNTLTNRVITLWYRPPELLLGATK--YGPAVDMWSVGCIFAELLNGKPILPGKNEAEQL 218
++ ++ + PE++ K Y D+++ G + EL+ G+ N +Q+
Sbjct: 160 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 103 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFS-YDH 161
+F + ++ +Q G+ Y H ++HRD+K +N+ + + +K+ DFGLA S +
Sbjct: 105 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 164
Query: 162 NNTLTNRVITLWYRPPELLLGATK--YGPAVDMWSVGCIFAELLNGKPILPGKNEAEQL 218
++ ++ + PE++ K Y D+++ G + EL+ G+ N +Q+
Sbjct: 165 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 223
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 103 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFS-YDH 161
+F + ++ +Q G+ Y H ++HRD+K +N+ + + +K+ DFGLA S +
Sbjct: 102 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 161
Query: 162 NNTLTNRVITLWYRPPELLLGATK--YGPAVDMWSVGCIFAELLNGKPILPGKNEAEQL 218
++ ++ + PE++ K Y D+++ G + EL+ G+ N +Q+
Sbjct: 162 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 220
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 30/207 (14%)
Query: 10 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDE 69
MA IKT K D+ +E F ++E +++ H +++KL ++T
Sbjct: 39 MAVAIKT-----CKNCTSDSVREKF----LQEALTMRQFDHPHIVKLIGVITE------- 82
Query: 70 QGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQV 128
+++ E +L + + Y QL T L Y +
Sbjct: 83 ----------NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 132
Query: 129 LHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGP 188
+HRDI N+L+ + +KL DFGL+R + + + + PE + ++
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFRRFTS 191
Query: 189 AVDMWSVG-CIFAELLNG-KPILPGKN 213
A D+W G C++ L++G KP KN
Sbjct: 192 ASDVWMFGVCMWEILMHGVKPFQGVKN 218
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 103 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFS-YDH 161
+F + ++ +Q G+ Y H ++HRD+K +N+ + + +K+ DFGLA S +
Sbjct: 105 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 164
Query: 162 NNTLTNRVITLWYRPPELLLGATK--YGPAVDMWSVGCIFAELLNGKPILPGKNEAEQL 218
++ ++ + PE++ K Y D+++ G + EL+ G+ N +Q+
Sbjct: 165 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 223
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
+++HRDIK SN+L+D GN+KL DFG++ D + + P + A++
Sbjct: 146 KIIHRDIKPSNILLDRSGNIKLCDFGISGQL-VDSIAKTRDAGCRPYMAPERIDPSASRQ 204
Query: 187 GPAV--DMWSVGCIFAELLNGKPILPGKNEA-EQLSKIFE 223
G V D+WS+G EL G+ P N +QL+++ +
Sbjct: 205 GYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK 244
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 79/181 (43%), Gaps = 19/181 (10%)
Query: 41 EIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRP 100
E+ +L+K +H N++ T+P Q + Y H L + +
Sbjct: 54 EVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLY------------HHLHIIETK- 100
Query: 101 GLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFS-Y 159
F + ++ +Q G+ Y H ++HRD+K +N+ + + +K+ DFGLA S +
Sbjct: 101 ---FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW 157
Query: 160 DHNNTLTNRVITLWYRPPELLLGATK--YGPAVDMWSVGCIFAELLNGKPILPGKNEAEQ 217
++ ++ + PE++ K Y D+++ G + EL+ G+ N +Q
Sbjct: 158 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217
Query: 218 L 218
+
Sbjct: 218 I 218
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 30/207 (14%)
Query: 10 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDE 69
MA IKT K D+ +E F ++E +++ H +++KL ++T
Sbjct: 39 MAVAIKT-----CKNCTSDSVREKF----LQEALTMRQFDHPHIVKLIGVITE------- 82
Query: 70 QGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQV 128
+++ E +L + + Y QL T L Y +
Sbjct: 83 ----------NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 132
Query: 129 LHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGP 188
+HRDI N+L+ +KL DFGL+R + + + + PE + ++
Sbjct: 133 VHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFRRFTS 191
Query: 189 AVDMWSVG-CIFAELLNG-KPILPGKN 213
A D+W G C++ L++G KP KN
Sbjct: 192 ASDVWMFGVCMWEILMHGVKPFQGVKN 218
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 31/203 (15%)
Query: 14 IKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRP 73
+ G +VA+K+++ + +G + E++++ H N+++L+ +P ER
Sbjct: 51 LADGXLVAVKRLK-EERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP-TER------ 102
Query: 74 DGNKYRGSTYMVFEYMDHDLTG--LADRPGLRFTVPQIKCYMKQLLT-----GLHYCHVN 126
+V+ YM + L +RP + P + +Q + GL Y H +
Sbjct: 103 ---------LLVYPYMANGSVASCLRERPE---SQPPLDWPKRQRIALGSARGLAYLHDH 150
Query: 127 ---QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGA 183
+++HRD+K +N+L+D E + DFGLA+ Y + + + PE L
Sbjct: 151 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPE-YLST 209
Query: 184 TKYGPAVDMWSVGCIFAELLNGK 206
K D++ G + EL+ G+
Sbjct: 210 GKSSEKTDVFGYGVMLLELITGQ 232
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 87/207 (42%), Gaps = 25/207 (12%)
Query: 8 VFMAREIKTGEIVAL-KKIRMDNEKEG--FPITAIREIKILKKLQHENVIKLKEIVTSPG 64
V+ + GE V + I++ NE G + + E I+ + H ++++L + SP
Sbjct: 54 VYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPT 113
Query: 65 PERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCH 124
+ Q P G + EY+ + + L + V Q+ G+ Y
Sbjct: 114 IQLVTQLMPHG--------CLLEYVHEHKDNIGSQLLLNWCV--------QIAKGMMYLE 157
Query: 125 VNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN--NTLTNRVITLWYRPPELLLG 182
+++HRD+ N+L+ + ++K+ DFGLAR D N ++ W +
Sbjct: 158 ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE--CIH 215
Query: 183 ATKYGPAVDMWSVGCIFAELLN--GKP 207
K+ D+WS G EL+ GKP
Sbjct: 216 YRKFTHQSDVWSYGVTIWELMTFGGKP 242
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 103 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFS-YDH 161
+F + ++ +Q G+ Y H ++HRD+K +N+ + + +K+ DFGLA S +
Sbjct: 100 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 159
Query: 162 NNTLTNRVITLWYRPPELLLGATK--YGPAVDMWSVGCIFAELLNGKPILPGKNEAEQL 218
++ ++ + PE++ K Y D+++ G + EL+ G+ N +Q+
Sbjct: 160 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 30/207 (14%)
Query: 10 MAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDE 69
MA IKT K D+ +E F ++E +++ H +++KL ++T
Sbjct: 419 MAVAIKT-----CKNCTSDSVREKF----LQEALTMRQFDHPHIVKLIGVITE------- 462
Query: 70 QGRPDGNKYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQV 128
+++ E +L + + Y QL T L Y +
Sbjct: 463 ----------NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 512
Query: 129 LHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGP 188
+HRDI N+L+ +KL DFGL+R + + + + PE + ++
Sbjct: 513 VHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFRRFTS 571
Query: 189 AVDMWSVG-CIFAELLNG-KPILPGKN 213
A D+W G C++ L++G KP KN
Sbjct: 572 ASDVWMFGVCMWEILMHGVKPFQGVKN 598
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 119/286 (41%), Gaps = 31/286 (10%)
Query: 17 GEIVAL-KKIRMDNEKEG--FPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRP 73
GE V + I++ NE G + + E I+ + H ++++L + SP + Q P
Sbjct: 40 GETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMP 99
Query: 74 DGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDI 133
G + EY+ + + L + V Q+ G+ Y +++HRD+
Sbjct: 100 HG--------CLLEYVHEHKDNIGSQLLLNWCV--------QIAKGMMYLEERRLVHRDL 143
Query: 134 KGSNLLIDNEGNLKLADFGLARSFSYDHN--NTLTNRVITLWYRPPELLLGATKYGPAVD 191
N+L+ + ++K+ DFGLAR D N ++ W + K+ D
Sbjct: 144 AARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE--CIHYRKFTHQSD 201
Query: 192 MWSVGCIFAELLN--GKPI--LPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
+WS G EL+ GKP +P + + L K L P TI + + +
Sbjct: 202 VWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDAD 261
Query: 248 SRTMKRRVREVFRHFDRHALELLEKMLMLDPSQRISAKDALDSEYF 293
SR + +E+ F R A + ++ L++ R+ DS++F
Sbjct: 262 SRP---KFKELAAEFSRMARD-PQRYLVIQGDDRMKLPSPNDSKFF 303
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 119 GLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI--TLWYRP 176
GLHY H ++HRD+K N+L+D K+ DFG+++ + + + T V+ TL Y
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGT-ELDQTHLXXVVKGTLGYID 209
Query: 177 PELLLGATKYGPAVDMWSVGCIFAELLNGKPIL 209
PE + + D++S G + E+L + +
Sbjct: 210 PEYFIKG-RLTEKSDVYSFGVVLFEVLCARSAI 241
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 91/224 (40%), Gaps = 34/224 (15%)
Query: 83 YMVFEYM--DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLI 140
Y+VFE M L+ + R F + ++ + + L + H + HRD+K N+L
Sbjct: 87 YLVFEKMRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILC 144
Query: 141 DNEGNL---KLADFGLARSFSYDHNNT------LTNRVITLWYRPPELLLG----ATKYG 187
++ + K+ DF L + + + L + Y PE++ A+ Y
Sbjct: 145 EHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYD 204
Query: 188 PAVDMWSVGCIFAELLNGKPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKP 247
D+WS+G I LL+G P G+ CGS + W PA +
Sbjct: 205 KRCDLWSLGVILYILLSGYPPFVGR------------CGS--DCGWDRGEACPACQNMLF 250
Query: 248 SRTMKRRVR---EVFRHFDRHALELLEKMLMLDPSQRISAKDAL 288
+ + + + H A +L+ K+L+ D QR+SA L
Sbjct: 251 ESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVL 294
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 81/198 (40%), Gaps = 25/198 (12%)
Query: 19 IVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
I K D+ +E F ++E +++ H +++KL ++T
Sbjct: 46 IKTCKNCTSDSVREKF----LQEALTMRQFDHPHIVKLIGVITE---------------- 85
Query: 79 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSN 137
+++ E +L + + Y QL T L Y + +HRDI N
Sbjct: 86 -NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARN 144
Query: 138 LLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG- 196
+L+ + +KL DFGL+R + + + + PE + ++ A D+W G
Sbjct: 145 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFRRFTSASDVWMFGV 203
Query: 197 CIFAELLNG-KPILPGKN 213
C++ L++G KP KN
Sbjct: 204 CMWEILMHGVKPFQGVKN 221
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 81/198 (40%), Gaps = 25/198 (12%)
Query: 19 IVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
I K D+ +E F ++E +++ H +++KL ++T
Sbjct: 48 IKTCKNCTSDSVREKF----LQEALTMRQFDHPHIVKLIGVIT----------------- 86
Query: 79 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSN 137
+++ E +L + + Y QL T L Y + +HRDI N
Sbjct: 87 ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARN 146
Query: 138 LLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG- 196
+L+ + +KL DFGL+R + + + + PE + ++ A D+W G
Sbjct: 147 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFRRFTSASDVWMFGV 205
Query: 197 CIFAELLNG-KPILPGKN 213
C++ L++G KP KN
Sbjct: 206 CMWEILMHGVKPFQGVKN 223
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 81/198 (40%), Gaps = 25/198 (12%)
Query: 19 IVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
I K D+ +E F ++E +++ H +++KL ++T
Sbjct: 45 IKTCKNCTSDSVREKF----LQEALTMRQFDHPHIVKLIGVITE---------------- 84
Query: 79 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSN 137
+++ E +L + + Y QL T L Y + +HRDI N
Sbjct: 85 -NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARN 143
Query: 138 LLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG- 196
+L+ + +KL DFGL+R + + + + PE + ++ A D+W G
Sbjct: 144 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFRRFTSASDVWMFGV 202
Query: 197 CIFAELLNG-KPILPGKN 213
C++ L++G KP KN
Sbjct: 203 CMWEILMHGVKPFQGVKN 220
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 78/196 (39%), Gaps = 19/196 (9%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPE 66
+VF R + G + A+K+ F R K+ + HE V + P
Sbjct: 72 EVFKVRSKEDGRLYAVKR-----SMSPFRGPKDRARKLAEVGSHEKVGQ------HPCCV 120
Query: 67 RDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVN 126
R EQ +G G Y+ E L + G Q+ Y++ L L + H
Sbjct: 121 RLEQAWEEG----GILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ 176
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKY 186
++H D+K +N+ + G KL DFGL + Y PELL G+ Y
Sbjct: 177 GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR--YMAPELLQGS--Y 232
Query: 187 GPAVDMWSVGCIFAEL 202
G A D++S+G E+
Sbjct: 233 GTAADVFSLGLTILEV 248
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN 163
T+ + Y Q+ G+ + + +HRD+ N+L+ + +K+ DFGLAR D +
Sbjct: 145 LTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 204
Query: 164 TLTNRV-ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSK 220
+ L + PE + Y D+WS G + E+ + G PG E+ +
Sbjct: 205 VRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 262
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 81/198 (40%), Gaps = 25/198 (12%)
Query: 19 IVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
I K D+ +E F ++E +++ H +++KL ++T
Sbjct: 71 IKTCKNCTSDSVREKF----LQEALTMRQFDHPHIVKLIGVIT----------------- 109
Query: 79 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSN 137
+++ E +L + + Y QL T L Y + +HRDI N
Sbjct: 110 ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARN 169
Query: 138 LLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG- 196
+L+ + +KL DFGL+R + + + + PE + ++ A D+W G
Sbjct: 170 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFRRFTSASDVWMFGV 228
Query: 197 CIFAELLNG-KPILPGKN 213
C++ L++G KP KN
Sbjct: 229 CMWEILMHGVKPFQGVKN 246
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 81/198 (40%), Gaps = 25/198 (12%)
Query: 19 IVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
I K D+ +E F ++E +++ H +++KL ++T
Sbjct: 40 IKTCKNCTSDSVREKF----LQEALTMRQFDHPHIVKLIGVITE---------------- 79
Query: 79 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSN 137
+++ E +L + + Y QL T L Y + +HRDI N
Sbjct: 80 -NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARN 138
Query: 138 LLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG- 196
+L+ + +KL DFGL+R + + + + PE + ++ A D+W G
Sbjct: 139 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFRRFTSASDVWMFGV 197
Query: 197 CIFAELLNG-KPILPGKN 213
C++ L++G KP KN
Sbjct: 198 CMWEILMHGVKPFQGVKN 215
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 21/122 (17%)
Query: 39 IREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLA 97
+RE+ I+K+L+H N++ VT P + +V EY+ L L
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPP----------------NLSIVTEYLSRGSLYRLL 125
Query: 98 DRPGLRFTVPQIK--CYMKQLLTGLHYCHVNQ--VLHRDIKGSNLLIDNEGNLKLADFGL 153
+ G R + + + + G++Y H ++HRD+K NLL+D + +K+ DFGL
Sbjct: 126 HKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGL 185
Query: 154 AR 155
+R
Sbjct: 186 SR 187
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 9/122 (7%)
Query: 90 DHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLA 149
+ D G P T+ + Y Q+ G+ + + +HRD+ N+L+ +K+
Sbjct: 185 EEDSDGFYKEP---ITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKIC 241
Query: 150 DFGLARSFSY--DHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAEL--LNG 205
DFGLAR D+ R+ W P + Y D+WS G + E+ L G
Sbjct: 242 DFGLARDIYKNPDYVRKGDTRLPLKWMAPESIF--DKIYSTKSDVWSYGVLLWEIFSLGG 299
Query: 206 KP 207
P
Sbjct: 300 SP 301
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 81/198 (40%), Gaps = 25/198 (12%)
Query: 19 IVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKY 78
I K D+ +E F ++E +++ H +++KL ++T
Sbjct: 43 IKTCKNCTSDSVREKF----LQEALTMRQFDHPHIVKLIGVITE---------------- 82
Query: 79 RGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSN 137
+++ E +L + + Y QL T L Y + +HRDI N
Sbjct: 83 -NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARN 141
Query: 138 LLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVG- 196
+L+ + +KL DFGL+R + + + + PE + ++ A D+W G
Sbjct: 142 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFRRFTSASDVWMFGV 200
Query: 197 CIFAELLNG-KPILPGKN 213
C++ L++G KP KN
Sbjct: 201 CMWEILMHGVKPFQGVKN 218
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 30/173 (17%)
Query: 57 KEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMD---HDLTGLADRPGLRFTVPQIKCYM 113
+EI ++PG + + + + RGS V ++ HD L D C++
Sbjct: 58 REIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELCHV 117
Query: 114 KQLLT-GLHYCHVN-----------QVLHRDIKGSNLLIDNEGNLKLADFGLARSFS--- 158
+ ++ GL Y H + + HRD K N+L+ ++ LADFGLA F
Sbjct: 118 AETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGK 177
Query: 159 ---YDHNNTLTNRVITLWYRPPELLLGATKYG----PAVDMWSVGCIFAELLN 204
H T R Y PE+L GA + +DM+++G + EL++
Sbjct: 178 PPGDTHGQVGTRR-----YMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 119 GLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI-TLWYRPP 177
GLHY H ++HRD+K N+L+D K+ DFG+++ + L V TL Y P
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDP 210
Query: 178 ELLLGATKYGPAVDMWSVGCIFAELLNGKPIL 209
E + + D++S G + E+L + +
Sbjct: 211 EYFIKG-RLTEKSDVYSFGVVLFEVLCARSAI 241
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 11 AREIKTGEIVALKKIRMDNEKEGFP--ITAIREIKILKKLQHENVIKLKEIVTSPGPERD 68
AR+I GE ++ NE I + E ++K +V++L +V+
Sbjct: 37 ARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS------- 89
Query: 69 EQGRPDGNKYRGSTYMVFEYMDH-DLTGL--ADRPGLRF-------TVPQIKCYMKQLLT 118
+G+P T +V E M H DL + RP T+ ++ ++
Sbjct: 90 -KGQP--------TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 140
Query: 119 GLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARS-FSYDHNNTLTNRVITLWYRPP 177
G+ Y + + +HRD+ N ++ ++ +K+ DFG+ R + D+ ++ + + P
Sbjct: 141 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 178 ELLLGATKYGPAVDMWSVGCIFAEL 202
E L + + DMWS G + E+
Sbjct: 201 ESLKDGV-FTTSSDMWSFGVVLWEI 224
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 84 MVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNE 143
MV E + L L D FT+ + QLL+ + Y H +++RD+K N LI +
Sbjct: 74 MVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQ 133
Query: 144 GNLK-----LADFGLARSF 157
GN K + DFGLA+ +
Sbjct: 134 GNKKEHVIHIIDFGLAKEY 152
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 11 AREIKTGEIVALKKIRMDNEKEGFP--ITAIREIKILKKLQHENVIKLKEIVTSPGPERD 68
AR+I GE ++ NE I + E ++K +V++L +V+
Sbjct: 38 ARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS------- 90
Query: 69 EQGRPDGNKYRGSTYMVFEYMDH-DLTGL--ADRPGLRF-------TVPQIKCYMKQLLT 118
+G+P T +V E M H DL + RP T+ ++ ++
Sbjct: 91 -KGQP--------TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 119 GLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARS-FSYDHNNTLTNRVITLWYRPP 177
G+ Y + + +HRD+ N ++ ++ +K+ DFG+ R + D+ ++ + + P
Sbjct: 142 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 178 ELLLGATKYGPAVDMWSVGCIFAEL 202
E L + + DMWS G + E+
Sbjct: 202 ESLKDGV-FTTSSDMWSFGVVLWEI 225
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 112 YMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN-RVI 170
Y+ + + GL H + HRDIK N+L+ N +ADFGLA F + T+ +V
Sbjct: 136 YLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVG 195
Query: 171 TLWYRPPELLLGATKYGPA----VDMWSVGCIFAEL 202
T Y PE+L GA + +DM+++G + EL
Sbjct: 196 TRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 23/169 (13%)
Query: 39 IREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGLA 97
+RE+ I+K+L+H N++ VT P + +V EY+ L L
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPP----------------NLSIVTEYLSRGSLYRLL 125
Query: 98 DRPGLRFTVPQIK--CYMKQLLTGLHYCHVNQ--VLHRDIKGSNLLIDNEGNLKLADFGL 153
+ G R + + + + G++Y H ++HR++K NLL+D + +K+ DFGL
Sbjct: 126 HKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGL 185
Query: 154 ARSFSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAEL 202
+R + ++ + W P +L D++S G I EL
Sbjct: 186 SRLKASTFLSSKSAAGTPEWMAPE--VLRDEPSNEKSDVYSFGVILWEL 232
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 95/213 (44%), Gaps = 46/213 (21%)
Query: 17 GEIVALKKIRMDNEKEGFPITAIREIKILKKLQ-HENVIKLKEIVTSPGPERDEQGRPDG 75
G VA+K++ +D F A+ EIK+L + H NVI+ S +R
Sbjct: 57 GRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRY---YCSETTDR-------- 100
Query: 76 NKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIK------CYMKQLLTGLHYCHVNQVL 129
Y+ E + +L L + + +++ ++Q+ +G+ + H +++
Sbjct: 101 -----FLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKII 155
Query: 130 HRDIKGSNLLIDNEG-----------NLK--LADFGLARSFS---YDHNNTLTNRVITLW 173
HRD+K N+L+ NL+ ++DFGL + L N T
Sbjct: 156 HRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSG 215
Query: 174 YRPPELLLGATK--YGPAVDMWSVGCIFAELLN 204
+R PELL +TK ++D++S+GC+F +L+
Sbjct: 216 WRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 97/263 (36%), Gaps = 70/263 (26%)
Query: 40 REIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMD-HDLTGLAD 98
+EI IL +H N++ L E S M+FE++ D+ +
Sbjct: 50 KEISILNIARHRNILHLHESFESMEE----------------LVMIFEFISGLDIFERIN 93
Query: 99 RPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDN--EGNLKLADFGLARS 156
+I Y+ Q+ L + H + + H DI+ N++ +K+ +FG AR
Sbjct: 94 TSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ 153
Query: 157 FSYDHNNTLTNRVITLWYRPPELLLGATKYGP----------AVDMWSVGCIFAELLNG- 205
N L + PE Y P A DMWS+G + LL+G
Sbjct: 154 LKPGDN-------FRLLFTAPEY------YAPEVHQHDVVSTATDMWSLGTLVYVLLSGI 200
Query: 206 KPILPGKNEAEQLSKIFELCGSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRH 265
P L N+ + + I + DE E F+
Sbjct: 201 NPFLAETNQ-QIIENIMNAEYTFDE--------------------------EAFKEISIE 233
Query: 266 ALELLEKMLMLDPSQRISAKDAL 288
A++ ++++L+ + R++A +AL
Sbjct: 234 AMDFVDRLLVKERKSRMTASEAL 256
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 20/184 (10%)
Query: 39 IREIKILKKLQHENVIKLKEIVTSPGP-----ERDEQGRPDG----NKYRGSTYMVFEYM 89
+ E +LK++ H +VIKL + GP E + G G ++ G Y+
Sbjct: 74 LSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL--GSG 131
Query: 90 DHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKL 148
+ D P R T+ + + Q+ G+ Y +++HRD+ N+L+ +K+
Sbjct: 132 GSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKI 191
Query: 149 ADFGLARSFSYDHNNTLTN---RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAEL--L 203
+DFGL+R Y+ ++ + R+ W L Y D+WS G + E+ L
Sbjct: 192 SDFGLSRDV-YEEDSXVKRSQGRIPVKWMAIESLF--DHIYTTQSDVWSFGVLLWEIVTL 248
Query: 204 NGKP 207
G P
Sbjct: 249 GGNP 252
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 95/213 (44%), Gaps = 46/213 (21%)
Query: 17 GEIVALKKIRMDNEKEGFPITAIREIKILKKLQ-HENVIKLKEIVTSPGPERDEQGRPDG 75
G VA+K++ +D F A+ EIK+L + H NVI+ S +R
Sbjct: 57 GRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRY---YCSETTDR-------- 100
Query: 76 NKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIK------CYMKQLLTGLHYCHVNQVL 129
Y+ E + +L L + + +++ ++Q+ +G+ + H +++
Sbjct: 101 -----FLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKII 155
Query: 130 HRDIKGSNLLIDNEG-----------NLK--LADFGLARSFS---YDHNNTLTNRVITLW 173
HRD+K N+L+ NL+ ++DFGL + L N T
Sbjct: 156 HRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSG 215
Query: 174 YRPPELLLGATK--YGPAVDMWSVGCIFAELLN 204
+R PELL +TK ++D++S+GC+F +L+
Sbjct: 216 WRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
Query: 104 FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN 163
T+ + Y Q+ G+ + + +HRD+ N+L+ + +K+ DFGLAR D +
Sbjct: 141 LTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDY 200
Query: 164 TLTNRV-ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN-GKPILPGKNEAEQLSK 220
+ L + PE + Y D+WS G + E+ + G PG E+ +
Sbjct: 201 VRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXR 258
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 115 QLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNN----------- 163
Q+ + + H ++HRD+K SN+ + +K+ DFGL + D
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 231
Query: 164 TLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELL 203
T +V T Y PE + G Y VD++S+G I ELL
Sbjct: 232 THXGQVGTKLYMSPEQIHG-NNYSHKVDIFSLGLILFELL 270
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 84/205 (40%), Gaps = 38/205 (18%)
Query: 17 GEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGN 76
GE VA+K E F T I + +++ HEN++ D +G
Sbjct: 60 GEKVAVKVFFTTEEASWFRETEIYQTVLMR---HENILGF--------IAADIKGTGSWT 108
Query: 77 KYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLH-YCHVNQ-------- 127
+ Y++ +Y H+ L D L+ T K +K + + CH++
Sbjct: 109 QL----YLITDY--HENGSLYDY--LKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGK 160
Query: 128 --VLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLT---NRVITLWYRPPELL-- 180
+ HRD+K N+L+ G +AD GLA F D N RV T Y PPE+L
Sbjct: 161 PAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDE 220
Query: 181 -LGATKYGPAV--DMWSVGCIFAEL 202
L + + DM+S G I E+
Sbjct: 221 SLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 20/184 (10%)
Query: 39 IREIKILKKLQHENVIKLKEIVTSPGP-----ERDEQGRPDG----NKYRGSTYMVFEYM 89
+ E +LK++ H +VIKL + GP E + G G ++ G Y+
Sbjct: 74 LSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL--GSG 131
Query: 90 DHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKL 148
+ D P R T+ + + Q+ G+ Y +++HRD+ N+L+ +K+
Sbjct: 132 GSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKI 191
Query: 149 ADFGLARSFSYDHNNTLTN---RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAEL--L 203
+DFGL+R Y+ ++ + R+ W L Y D+WS G + E+ L
Sbjct: 192 SDFGLSRDV-YEEDSYVKRSQGRIPVKWMAIESLF--DHIYTTQSDVWSFGVLLWEIVTL 248
Query: 204 NGKP 207
G P
Sbjct: 249 GGNP 252
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 20/184 (10%)
Query: 39 IREIKILKKLQHENVIKLKEIVTSPGP-----ERDEQGRPDG----NKYRGSTYMVFEYM 89
+ E +LK++ H +VIKL + GP E + G G ++ G Y+
Sbjct: 74 LSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL--GSG 131
Query: 90 DHDLTGLADRPGLR-FTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKL 148
+ D P R T+ + + Q+ G+ Y ++HRD+ N+L+ +K+
Sbjct: 132 GSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKI 191
Query: 149 ADFGLARSFSYDHNNTLTN---RVITLWYRPPELLLGATKYGPAVDMWSVGCIFAEL--L 203
+DFGL+R Y+ ++ + R+ W L Y D+WS G + E+ L
Sbjct: 192 SDFGLSRDV-YEEDSXVKRSQGRIPVKWMAIESLF--DHIYTTQSDVWSFGVLLWEIVTL 248
Query: 204 NGKP 207
G P
Sbjct: 249 GGNP 252
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 28/190 (14%)
Query: 20 VALKKIRMD---NEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGN 76
VA+K + D + KE F + E I+K L H +++KL I+ + P
Sbjct: 55 VAVKTCKKDCTLDNKEKF----MSEAVIMKNLDHPHIVKLIGII---------EEEP--- 98
Query: 77 KYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKG 135
T+++ E + +L +R V + Y Q+ + Y +HRDI
Sbjct: 99 -----TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAV 153
Query: 136 SNLLIDNEGNLKLADFGLARSF-SYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWS 194
N+L+ + +KL DFGL+R D+ R+ W P + ++ A D+W
Sbjct: 154 RNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPES--INFRRFTTASDVWM 211
Query: 195 VGCIFAELLN 204
E+L+
Sbjct: 212 FAVCMWEILS 221
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 28/190 (14%)
Query: 20 VALKKIRMD---NEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGN 76
VA+K + D + KE F + E I+K L H +++KL I+ + P
Sbjct: 43 VAVKTCKKDCTLDNKEKF----MSEAVIMKNLDHPHIVKLIGII---------EEEP--- 86
Query: 77 KYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKG 135
T+++ E + +L +R V + Y Q+ + Y +HRDI
Sbjct: 87 -----TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAV 141
Query: 136 SNLLIDNEGNLKLADFGLARSF-SYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWS 194
N+L+ + +KL DFGL+R D+ R+ W P + ++ A D+W
Sbjct: 142 RNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPES--INFRRFTTASDVWM 199
Query: 195 VGCIFAELLN 204
E+L+
Sbjct: 200 FAVCMWEILS 209
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 30/205 (14%)
Query: 11 AREIKTGEIVALKKIRMDNEKEGFP--ITAIREIKILKKLQHENVIKLKEIVTSPGPERD 68
AR+I GE ++ NE I + E ++K +V++L +V+
Sbjct: 38 ARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS------- 90
Query: 69 EQGRPDGNKYRGSTYMVFEYMDH-DLTGL--ADRPGLRF-------TVPQIKCYMKQLLT 118
+G+P T +V E M H DL + RP T+ ++ ++
Sbjct: 91 -KGQP--------TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 119 GLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF-SYDHNNTLTNRVITLWYRPP 177
G+ Y + + +HRD+ N ++ ++ +K+ DFG+ R D ++ + + P
Sbjct: 142 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 178 ELLLGATKYGPAVDMWSVGCIFAEL 202
E L + + DMWS G + E+
Sbjct: 202 ESLKDGV-FTTSSDMWSFGVVLWEI 225
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 28/190 (14%)
Query: 20 VALKKIRMD---NEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGN 76
VA+K + D + KE F + E I+K L H +++KL I+ + P
Sbjct: 39 VAVKTCKKDCTLDNKEKF----MSEAVIMKNLDHPHIVKLIGII---------EEEP--- 82
Query: 77 KYRGSTYMVFEYMDH-DLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKG 135
T+++ E + +L +R V + Y Q+ + Y +HRDI
Sbjct: 83 -----TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAV 137
Query: 136 SNLLIDNEGNLKLADFGLARSF-SYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWS 194
N+L+ + +KL DFGL+R D+ R+ W P + ++ A D+W
Sbjct: 138 RNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPES--INFRRFTTASDVWM 195
Query: 195 VGCIFAELLN 204
E+L+
Sbjct: 196 FAVCMWEILS 205
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 111 CYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVI 170
CY + G+ + +Q +HRD+ N L+D + +K++DFG+ R D +
Sbjct: 110 CY--DVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKF 167
Query: 171 TLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN 204
+ + PE + KY D+W+ G + E+ +
Sbjct: 168 PVKWSAPE-VFHYFKYSSKSDVWAFGILMWEVFS 200
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 30/205 (14%)
Query: 11 AREIKTGEIVALKKIRMDNEKEGFP--ITAIREIKILKKLQHENVIKLKEIVTSPGPERD 68
AR+I GE ++ NE I + E ++K +V++L +V+
Sbjct: 38 ARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS------- 90
Query: 69 EQGRPDGNKYRGSTYMVFEYMDH-DLTGL--ADRPGLRF-------TVPQIKCYMKQLLT 118
+G+P T +V E M H DL + RP T+ ++ ++
Sbjct: 91 -KGQP--------TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 119 GLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF-SYDHNNTLTNRVITLWYRPP 177
G+ Y + + +HRD+ N ++ ++ +K+ DFG+ R D ++ + + P
Sbjct: 142 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 178 ELLLGATKYGPAVDMWSVGCIFAEL 202
E L + + DMWS G + E+
Sbjct: 202 ESLKDGV-FTTSSDMWSFGVVLWEI 225
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 30/205 (14%)
Query: 11 AREIKTGEIVALKKIRMDNEKEGFP--ITAIREIKILKKLQHENVIKLKEIVTSPGPERD 68
AR+I GE ++ NE I + E ++K +V++L +V+
Sbjct: 35 ARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS------- 87
Query: 69 EQGRPDGNKYRGSTYMVFEYMDH-DLTGL--ADRPGLRF-------TVPQIKCYMKQLLT 118
+G+P T +V E M H DL + RP T+ ++ ++
Sbjct: 88 -KGQP--------TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 138
Query: 119 GLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF-SYDHNNTLTNRVITLWYRPP 177
G+ Y + + +HRD+ N ++ ++ +K+ DFG+ R D ++ + + P
Sbjct: 139 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 178 ELLLGATKYGPAVDMWSVGCIFAEL 202
E L + + DMWS G + E+
Sbjct: 199 ESLKDGV-FTTSSDMWSFGVVLWEI 222
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 83/204 (40%), Gaps = 36/204 (17%)
Query: 17 GEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGN 76
GE VA+K +EK F T + +L+ HEN++ + S R +
Sbjct: 31 GENVAVKIFSSRDEKSWFRETELYNTVMLR---HENILGF---IASDMTSRHSSTQ---- 80
Query: 77 KYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCY--MKQLLTGLHYCHVN-------- 126
+++ Y H++ L D L T+ + C + + +GL + H+
Sbjct: 81 -----LWLITHY--HEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP 132
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN---RVITLWYRPPELL--- 180
+ HRD+K N+L+ G +AD GLA S N RV T Y PE+L
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 192
Query: 181 --LGATKYGPAVDMWSVGCIFAEL 202
+ VD+W+ G + E+
Sbjct: 193 IQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 11 AREIKTGEIVALKKIRMDNEKEGFP--ITAIREIKILKKLQHENVIKLKEIVTSPGPERD 68
AR+I GE ++ NE I + E ++K +V++L +V+
Sbjct: 39 ARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS------- 91
Query: 69 EQGRPDGNKYRGSTYMVFEYMDH-DLTGL--ADRPGLRF-------TVPQIKCYMKQLLT 118
+G+P T +V E M H DL + RP T+ ++ ++
Sbjct: 92 -KGQP--------TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 142
Query: 119 GLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARS-FSYDHNNTLTNRVITLWYRPP 177
G+ Y + + +HR++ N ++ ++ +K+ DFG+ R + D+ ++ + + P
Sbjct: 143 GMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 178 ELLLGATKYGPAVDMWSVGCIFAEL 202
E L + + DMWS G + E+
Sbjct: 203 ESLKDGV-FTTSSDMWSFGVVLWEI 226
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 11 AREIKTGEIVALKKIRMDNEKEGFP--ITAIREIKILKKLQHENVIKLKEIVTSPGPERD 68
AR+I GE ++ NE I + E ++K +V++L +V+
Sbjct: 38 ARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS------- 90
Query: 69 EQGRPDGNKYRGSTYMVFEYMDH-DLTGL--ADRPGLRF-------TVPQIKCYMKQLLT 118
+G+P T +V E M H DL + RP T+ ++ ++
Sbjct: 91 -KGQP--------TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 119 GLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARS-FSYDHNNTLTNRVITLWYRPP 177
G+ Y + + +HR++ N ++ ++ +K+ DFG+ R + D+ ++ + + P
Sbjct: 142 GMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 178 ELLLGATKYGPAVDMWSVGCIFAEL 202
E L + + DMWS G + E+
Sbjct: 202 ESLKDGV-FTTSSDMWSFGVVLWEI 225
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 83/204 (40%), Gaps = 36/204 (17%)
Query: 17 GEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGN 76
GE VA+K +EK F T + +L+ HEN++ + S R +
Sbjct: 60 GENVAVKIFSSRDEKSWFRETELYNTVMLR---HENILGF---IASDMTSRHSSTQ---- 109
Query: 77 KYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCY--MKQLLTGLHYCHVN-------- 126
+++ Y H++ L D L T+ + C + + +GL + H+
Sbjct: 110 -----LWLITHY--HEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP 161
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN---RVITLWYRPPELL--- 180
+ HRD+K N+L+ G +AD GLA S N RV T Y PE+L
Sbjct: 162 AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 221
Query: 181 --LGATKYGPAVDMWSVGCIFAEL 202
+ VD+W+ G + E+
Sbjct: 222 IQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 83/204 (40%), Gaps = 36/204 (17%)
Query: 17 GEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGN 76
GE VA+K +EK F T + +L+ HEN++ + S R +
Sbjct: 31 GENVAVKIFSSRDEKSWFRETELYNTVMLR---HENILGF---IASDMTSRHSSTQ---- 80
Query: 77 KYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCY--MKQLLTGLHYCHVN-------- 126
+++ Y H++ L D L T+ + C + + +GL + H+
Sbjct: 81 -----LWLITHY--HEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP 132
Query: 127 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN---RVITLWYRPPELL--- 180
+ HRD+K N+L+ G +AD GLA S N RV T Y PE+L
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 192
Query: 181 --LGATKYGPAVDMWSVGCIFAEL 202
+ VD+W+ G + E+
Sbjct: 193 IQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 103 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFS-YDH 161
+F + Q+ +Q G+ Y H ++HRD+K +N+ + +K+ DFGLA S +
Sbjct: 128 KFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187
Query: 162 NNTLTNRVITLWYRPPELLLGATK--YGPAVDMWSVGCIFAELLNGKPILPGKNEAEQLS 219
+ + ++ + PE++ + D++S G + EL+ G+ N +Q+
Sbjct: 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI- 246
Query: 220 KIFEL---CGSPD 229
IF + SPD
Sbjct: 247 -IFMVGRGYASPD 258
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 85/206 (41%), Gaps = 32/206 (15%)
Query: 11 AREIKTGEIVALKKIRMDNEKEGFP--ITAIREIKILKKLQHENVIKLKEIVTSPGPERD 68
AR+I GE ++ NE I + E ++K +V++L +V+
Sbjct: 38 ARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS------- 90
Query: 69 EQGRPDGNKYRGSTYMVFEYMDH-DLTGL--ADRPGLRF-------TVPQIKCYMKQLLT 118
+G+P T +V E M H DL + RP T+ ++ ++
Sbjct: 91 -KGQP--------TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 119 GLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSF--SYDHNNTLTNRVITLWYRP 176
G+ Y + + +HRD+ N ++ ++ +K+ DFG+ R + + + W P
Sbjct: 142 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAP 201
Query: 177 PELLLGATKYGPAVDMWSVGCIFAEL 202
L G + + DMWS G + E+
Sbjct: 202 ESLKDGV--FTTSSDMWSFGVVLWEI 225
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 67/161 (41%), Gaps = 11/161 (6%)
Query: 112 YMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN--RV 169
+ Q+ G+ Y +++HRD+ N+L+ + ++K+ DFGLAR D + +V
Sbjct: 124 WCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKV 183
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLN--GKPI--LPGKNEAEQLSKIFELC 225
W +L ++ D+WS G EL+ KP +P + + L K L
Sbjct: 184 PIKWMALESIL--RRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLP 241
Query: 226 GSPDETIWPGVSKMPAYNHFKPSRTMKRRVREVFRHFDRHA 266
P TI M + + R RE+ F R A
Sbjct: 242 QPPICTI---DVYMIMVKCWMIDSECRPRFRELVSEFSRMA 279
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 115 QLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN---NTLTNRVIT 171
Q+ G+ Y + +HRD+ N+L+ + K++DFGL+++ D N +
Sbjct: 478 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 537
Query: 172 LWYRPPELLLGATKYGPAVDMWSVGCIFAELLN 204
WY P + K+ D+WS G + E +
Sbjct: 538 KWYAPE--CINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 106 VPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTL 165
V + + Q+ G+ Y +HRD+ N+L+ N K++DFGL+++ D ++
Sbjct: 109 VSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD-DSYY 167
Query: 166 TNRVITLW---YRPPELLLGATKYGPAVDMWSVGCIFAELLN 204
T R W + PE + K+ D+WS G E L+
Sbjct: 168 TARSAGKWPLKWYAPE-CINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 115 QLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHN---NTLTNRVIT 171
Q+ G+ Y + +HRD+ N+L+ + K++DFGL+++ D N +
Sbjct: 477 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 536
Query: 172 LWYRPPELLLGATKYGPAVDMWSVGCIFAELLN 204
WY P + K+ D+WS G + E +
Sbjct: 537 KWYAPE--CINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 84 MVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNE 143
MV E + L L D FT+ + QL+T + Y H +++RD+K N L+
Sbjct: 77 MVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRP 136
Query: 144 GN-----LKLADFGLARSF 157
G + + DFGLA+ +
Sbjct: 137 GTKRQHAIHIIDFGLAKEY 155
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 82/212 (38%), Gaps = 20/212 (9%)
Query: 5 ISQVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPG 64
S V + + G ALK+I +++ A RE + + H N+++L
Sbjct: 42 FSYVDLVEGLHDGHFYALKRILCHEQQD--REEAQREADMHRLFNHPNILRLVAYCLRER 99
Query: 65 PERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCH 124
+ E RG+ + +++ L D+ G T QI + + GL H
Sbjct: 100 GAKHEAWLLLPFFKRGTLW-------NEIERLKDK-GNFLTEDQILWLLLGICRGLEAIH 151
Query: 125 VNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRVITLW--------YRP 176
HRD+K +N+L+ +EG L D G + + W YR
Sbjct: 152 AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRA 211
Query: 177 PELLLGATK--YGPAVDMWSVGCIFAELLNGK 206
PEL + D+WS+GC+ ++ G+
Sbjct: 212 PELFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 115 QLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLT-NRVITLW 173
Q+ G+ + +HRD+ N+L+ + K+ DFGLAR D N + N + +
Sbjct: 169 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK 228
Query: 174 YRPPELLLGATKYGPAVDMWSVGCIFAELLN 204
+ PE + Y D+WS G EL +
Sbjct: 229 WMAPESIFNCV-YTFESDVWSYGIFLWELFS 258
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 115 QLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLT-NRVITLW 173
Q+ G+ + +HRD+ N+L+ + K+ DFGLAR D N + N + +
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK 235
Query: 174 YRPPELLLGATKYGPAVDMWSVGCIFAELLN 204
+ PE + Y D+WS G EL +
Sbjct: 236 WMAPESIFNCV-YTFESDVWSYGIFLWELFS 265
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 115 QLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLT-NRVITLW 173
Q+ G+ + +HRD+ N+L+ + K+ DFGLAR D N + N + +
Sbjct: 171 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK 230
Query: 174 YRPPELLLGATKYGPAVDMWSVGCIFAELLN 204
+ PE + Y D+WS G EL +
Sbjct: 231 WMAPESIFNCV-YTFESDVWSYGIFLWELFS 260
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 71/186 (38%), Gaps = 37/186 (19%)
Query: 39 IREIKILKKL-QHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLTGL 96
+ E+K+L L H N++ L T GP T ++ EY + DL
Sbjct: 74 MSELKVLSYLGNHMNIVNLLGACTIGGP----------------TLVITEYCCYGDLLNF 117
Query: 97 ADRPGLRF----TVPQI-------------KCYMKQLLTGLHYCHVNQVLHRDIKGSNLL 139
R F T P I + Q+ G+ + +HRD+ N+L
Sbjct: 118 LRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNIL 177
Query: 140 IDNEGNLKLADFGLARSFSYDHNNTLT-NRVITLWYRPPELLLGATKYGPAVDMWSVGCI 198
+ + K+ DFGLAR D N + N + + + PE + Y D+WS G
Sbjct: 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV-YTFESDVWSYGIF 236
Query: 199 FAELLN 204
EL +
Sbjct: 237 LWELFS 242
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 115 QLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLT-NRVITLW 173
Q+ G+ + +HRD+ N+L+ + K+ DFGLAR D N + N + +
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVK 235
Query: 174 YRPPELLLGATKYGPAVDMWSVGCIFAELLN 204
+ PE + Y D+WS G EL +
Sbjct: 236 WMAPESIFNCV-YTFESDVWSYGIFLWELFS 265
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 115 QLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN---RVIT 171
Q+ G+ Y + +HRD+ N+L+ + K++DFGL+++ D N +
Sbjct: 119 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPV 178
Query: 172 LWYRPPELLLGATKYGPAVDMWSVGCIFAE 201
WY P + K+ D+WS G + E
Sbjct: 179 KWYAPE--CINYYKFSSKSDVWSFGVLMWE 206
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 115 QLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN---RVIT 171
Q+ G+ Y + +HRD+ N+L+ + K++DFGL+++ D N +
Sbjct: 135 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 194
Query: 172 LWYRPPELLLGATKYGPAVDMWSVGCIFAE 201
WY P + K+ D+WS G + E
Sbjct: 195 KWYAPE--CINYYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 115 QLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN---RVIT 171
Q+ G+ Y + +HRD+ N+L+ + K++DFGL+++ D N +
Sbjct: 135 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 194
Query: 172 LWYRPPELLLGATKYGPAVDMWSVGCIFAE 201
WY P + K+ D+WS G + E
Sbjct: 195 KWYAPE--CINYYKFSSKSDVWSFGVLMWE 222
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 115 QLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN---RVIT 171
Q+ G+ Y + +HRD+ N+L+ + K++DFGL+++ D N +
Sbjct: 133 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 192
Query: 172 LWYRPPELLLGATKYGPAVDMWSVGCIFAE 201
WY P + K+ D+WS G + E
Sbjct: 193 KWYAPE--CINYYKFSSKSDVWSFGVLMWE 220
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 84 MVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNE 143
MV E + L L D F++ + QL++ + Y H +++RD+K N LI
Sbjct: 82 MVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRP 141
Query: 144 GN-----LKLADFGLARSF 157
GN + + DFGLA+ +
Sbjct: 142 GNKTQQVIHIIDFGLAKEY 160
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 31/175 (17%)
Query: 43 KILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDHDLTGLADRPGL 102
+ L ++ H +++++ V D G P G Y+V EY+ L G
Sbjct: 131 QFLAEVVHPSIVQIFNFVE----HTDRHGDPVG-------YIVMEYVGGQ--SLKRSKGQ 177
Query: 103 RFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLA---RSFSY 159
+ V + Y+ ++L L Y H +++ D+K N+++ E LKL D G SF Y
Sbjct: 178 KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSFGY 236
Query: 160 DHNNTLTNRVITLWYRPPELLLGATKYGPAV--DMWSVGCIFAELLNGKPILPGK 212
+ T ++ PE++ + GP V D+++VG A L P G+
Sbjct: 237 LYG--------TPGFQAPEIV----RTGPTVATDIYTVGRTLAALTLDLPTRNGR 279
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 115 QLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN---RVIT 171
Q+ G+ Y + +HRD+ N+L+ + K++DFGL+++ D N +
Sbjct: 125 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 184
Query: 172 LWYRPPELLLGATKYGPAVDMWSVGCIFAE 201
WY P + K+ D+WS G + E
Sbjct: 185 KWYAPE--CINYYKFSSKSDVWSFGVLMWE 212
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 79/178 (44%), Gaps = 28/178 (15%)
Query: 36 ITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLT 94
I + E ++K+ +V++L +V+ QG+P T ++ E M DL
Sbjct: 73 IEFLNEASVMKEFNCHHVVRLLGVVS--------QGQP--------TLVIMELMTRGDLK 116
Query: 95 --------GLADRPGLRF-TVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGN 145
+A+ P L ++ ++ ++ G+ Y + N+ +HRD+ N ++ +
Sbjct: 117 SYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT 176
Query: 146 LKLADFGLARS-FSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAEL 202
+K+ DFG+ R + D+ ++ + + PE L + D+WS G + E+
Sbjct: 177 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEI 233
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 87/234 (37%), Gaps = 38/234 (16%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIK-ILKKLQHENVIKLKEIVTSPGP 65
QV AR K G +RMD AI+ +K K H + E++ G
Sbjct: 40 QVLKARIKKDG-------LRMD--------AAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 66 ERDEQGRPDGNKYRGSTYMVFEYMDH----DLT------------GLADRPGLRFTVPQI 109
+ ++RG Y+ EY H D +A+ + Q+
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRV 169
+ + G+ Y Q +HRD+ N+L+ K+ADFGL+R T+ R+
Sbjct: 145 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM-GRL 203
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAEL--LNGKPILPGKNEAEQLSKI 221
W L + Y D+WS G + E+ L G P G AE K+
Sbjct: 204 PVRWMAIES--LNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC-GMTCAELYEKL 254
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 106 VPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTL 165
V + + Q+ G+ Y +HR++ N+L+ N K++DFGL+++ D ++
Sbjct: 435 VSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGAD-DSYY 493
Query: 166 TNRVITLW---YRPPELLLGATKYGPAVDMWSVGCIFAELLN 204
T R W + PE + K+ D+WS G E L+
Sbjct: 494 TARSAGKWPLKWYAPE-CINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 115 QLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN---RVIT 171
Q+ G+ Y + +HRD+ N+L+ + K++DFGL+++ D N +
Sbjct: 119 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 178
Query: 172 LWYRPPELLLGATKYGPAVDMWSVGCIFAE 201
WY P + K+ D+WS G + E
Sbjct: 179 KWYAPE--CINYYKFSSKSDVWSFGVLMWE 206
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 87/234 (37%), Gaps = 38/234 (16%)
Query: 7 QVFMAREIKTGEIVALKKIRMDNEKEGFPITAIREIK-ILKKLQHENVIKLKEIVTSPGP 65
QV AR K G +RMD AI+ +K K H + E++ G
Sbjct: 30 QVLKARIKKDG-------LRMD--------AAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 66 ERDEQGRPDGNKYRGSTYMVFEYMDH----DLT------------GLADRPGLRFTVPQI 109
+ ++RG Y+ EY H D +A+ + Q+
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 110 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTNRV 169
+ + G+ Y Q +HRD+ N+L+ K+ADFGL+R T+ R+
Sbjct: 135 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM-GRL 193
Query: 170 ITLWYRPPELLLGATKYGPAVDMWSVGCIFAEL--LNGKPILPGKNEAEQLSKI 221
W L + Y D+WS G + E+ L G P G AE K+
Sbjct: 194 PVRWMAIES--LNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC-GMTCAELYEKL 244
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 115 QLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN---RVIT 171
Q+ G+ Y + +HRD+ N+L+ + K++DFGL+++ D N +
Sbjct: 113 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 172
Query: 172 LWYRPPELLLGATKYGPAVDMWSVGCIFAE 201
WY P + K+ D+WS G + E
Sbjct: 173 KWYAPE--CINYYKFSSKSDVWSFGVLMWE 200
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 115 QLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSYDHNNTLTN---RVIT 171
Q+ G+ Y + +HRD+ N+L+ + K++DFGL+++ D N +
Sbjct: 115 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 174
Query: 172 LWYRPPELLLGATKYGPAVDMWSVGCIFAE 201
WY P + K+ D+WS G + E
Sbjct: 175 KWYAPE--CINYYKFSSKSDVWSFGVLMWE 202
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 79/178 (44%), Gaps = 28/178 (15%)
Query: 36 ITAIREIKILKKLQHENVIKLKEIVTSPGPERDEQGRPDGNKYRGSTYMVFEYMDH-DLT 94
I + E ++K+ +V++L +V+ QG+P T ++ E M DL
Sbjct: 63 IEFLNEASVMKEFNCHHVVRLLGVVS--------QGQP--------TLVIMELMTRGDLK 106
Query: 95 --------GLADRPGLRF-TVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGN 145
+A+ P L ++ ++ ++ G+ Y + N+ +HRD+ N ++ +
Sbjct: 107 SYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT 166
Query: 146 LKLADFGLARS-FSYDHNNTLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAEL 202
+K+ DFG+ R + D+ ++ + + PE L + D+WS G + E+
Sbjct: 167 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEI 223
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.137 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,908,445
Number of Sequences: 62578
Number of extensions: 616196
Number of successful extensions: 4108
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 1239
Number of HSP's gapped (non-prelim): 1311
length of query: 481
length of database: 14,973,337
effective HSP length: 103
effective length of query: 378
effective length of database: 8,527,803
effective search space: 3223509534
effective search space used: 3223509534
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)