BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>011630
MGSRYPSHQLSNGLFVSGRPEQPKEKAPTMSSVAMPYTGGDIKKSGELGKMFDIPMDSAK
SRKSGPITGAPSRTGSFAGAATHSGSIPNAAGRAGYNVSGPISSGGPGSSSMKKTNSGPL
NKHGEPIKKSSGPQSGGATRQNSGPIPPSLPATGLITSGPISSGPLNSSGAPRKLSGSLD
SSGSIKMNSSSIAQNQAVTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFILGAVH
NPILLIVVLVLFAVIAAIFIWNTCWGRKAITDFISCHPDTDLRTAKSGQFVKVTGVVTCG
NVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYISDFQS
GLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSLSSDDRLMRLKEGYI
KEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCEDTSNNDVIP
V

High Scoring Gene Products

Symbol, full name Information P value
AT1G16860 protein from Arabidopsis thaliana 4.1e-191
AT1G78880 protein from Arabidopsis thaliana 7.1e-187
AT4G22290 protein from Arabidopsis thaliana 1.2e-90

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  011630
        (481 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2015646 - symbol:AT1G16860 species:3702 "Arabi...  1852  4.1e-191  1
TAIR|locus:2037533 - symbol:AT1G78880 "AT1G78880" species...  1812  7.1e-187  1
TAIR|locus:2132075 - symbol:AT4G22290 "AT4G22290" species...   904  1.2e-90   1


>TAIR|locus:2015646 [details] [associations]
            symbol:AT1G16860 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=IDA] GO:GO:0016021
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 EMBL:AC051629
            EMBL:AY050887 EMBL:AY117261 EMBL:BT000665 IPI:IPI00537841
            PIR:H86303 RefSeq:NP_564009.1 UniGene:At.21790 PaxDb:Q9FZ45
            PRIDE:Q9FZ45 EnsemblPlants:AT1G16860.1 GeneID:838257
            KEGG:ath:AT1G16860 TAIR:At1g16860 eggNOG:NOG257904
            HOGENOM:HOG000242640 InParanoid:Q9FZ45 OMA:MIVPSSE PhylomeDB:Q9FZ45
            ProtClustDB:CLSN2679796 Genevestigator:Q9FZ45 Uniprot:Q9FZ45
        Length = 474

 Score = 1852 (657.0 bits), Expect = 4.1e-191, P = 4.1e-191
 Identities = 351/481 (72%), Positives = 388/481 (80%)

Query:     1 MGSRYPSHQLSNGLFVSGRPEQPKEKAPTMSSVAMPYTGGDIKKSGELGKMFDIPMDSAK 60
             MGSRYPSHQLSNGLFVSGRPEQPKE+APTMS+VAMPYTGGDIK+SGELGKMFDIP D  K
Sbjct:     1 MGSRYPSHQLSNGLFVSGRPEQPKERAPTMSAVAMPYTGGDIKRSGELGKMFDIPADGTK 60

Query:    61 SRKSGPITGAPSRTGSFAGAATHSGSIPNAAGRAGYNVXXXXXXXXXXXXXMKKTNSGPL 120
             SRKSGPI GAPSR+GSFAG A      P A GR   ++             MKKTNSGPL
Sbjct:    61 SRKSGPIPGAPSRSGSFAGTAQSGPGAPMATGRMSGSLASAGSVS------MKKTNSGPL 114

Query:   121 NKHGEPIKKSSGPQSGGATRQNSGPIPPSLPATGLITSGPISSGPLNSSGAPRKLSGSLD 180
             +KHGEP+KKSSGPQSGG TRQNSG IP  LPATGLITSGPI+SGPLNSSGAPRK+SG LD
Sbjct:   115 SKHGEPLKKSSGPQSGGVTRQNSGSIP-ILPATGLITSGPITSGPLNSSGAPRKVSGPLD 173

Query:   181 XXXXXXXXXXXIAQNQAVTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFILGAVH 240
                        +  NQAVTT+  EDD+S  K+FPKPVLWLV+LIF+MGF+AGGFILGAVH
Sbjct:   174 SSGLMKSHMPTVVHNQAVTTLGPEDDFSCLKSFPKPVLWLVVLIFIMGFLAGGFILGAVH 233

Query:   241 NPXXXXXXXXXXXXXXXXXXWNTCWGRKAITDFISCHPDTDLRTAKSGQFVKVTGVVTCG 300
             NP                  WN CWGR+ ITDFI+ +PD DLRTAK+GQ VKVTGVVTCG
Sbjct:   234 NPILLVVVAILFTVVAALFIWNICWGRRGITDFIARYPDADLRTAKNGQHVKVTGVVTCG 293

Query:   301 NVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYISDFQS 360
             NVPLESSF RVPRCVYTST LYEYR WGSKPAN  HRHFTWGLRS ERHVVDFYISDFQS
Sbjct:   294 NVPLESSFHRVPRCVYTSTCLYEYRGWGSKPANSSHRHFTWGLRSSERHVVDFYISDFQS 353

Query:   361 GLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSLSSDDRLMRLKEGYI 420
             GLRALVKTGSGA+VTP VDDSVVID K  ++ +SP+F+RWLG+K+L+SDDR+MRLKEGYI
Sbjct:   354 GLRALVKTGSGAKVTPLVDDSVVIDFKQGSEQVSPDFVRWLGKKNLTSDDRIMRLKEGYI 413

Query:   421 KEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCEDTSNNDVIP 480
             KEGSTVSV+G+VQRNDNVLMIVP  EP+A GWQW +C FP SLEGI+LRCED+SN D IP
Sbjct:   414 KEGSTVSVIGVVQRNDNVLMIVPSSEPLAAGWQWRRCTFPTSLEGIVLRCEDSSNVDAIP 473

Query:   481 V 481
             V
Sbjct:   474 V 474


>TAIR|locus:2037533 [details] [associations]
            symbol:AT1G78880 "AT1G78880" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005886 "plasma membrane"
            evidence=IDA] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
            GO:GO:0006508 GO:GO:0008233 EMBL:AC005679 HOGENOM:HOG000242640
            ProtClustDB:CLSN2679796 EMBL:AY072176 EMBL:AY096686 EMBL:AY120734
            EMBL:BT000364 IPI:IPI00537430 PIR:C96818 RefSeq:NP_178009.1
            UniGene:At.21193 PaxDb:Q9ZVA7 PRIDE:Q9ZVA7
            EnsemblPlants:AT1G78880.1 GeneID:844225 KEGG:ath:AT1G78880
            TAIR:At1g78880 eggNOG:NOG292696 InParanoid:Q9ZVA7 OMA:WNISCER
            PhylomeDB:Q9ZVA7 ArrayExpress:Q9ZVA7 Genevestigator:Q9ZVA7
            Uniprot:Q9ZVA7
        Length = 468

 Score = 1812 (642.9 bits), Expect = 7.1e-187, P = 7.1e-187
 Identities = 349/481 (72%), Positives = 383/481 (79%)

Query:     1 MGSRYPSHQLSNGLFVSGRPEQPKEKAPTMSSVAMPYTGGDIKKSGELGKMFDIPMDSAK 60
             MGSRY SHQLSNGLFVSGRPEQPKEK PTMSSVAMPYTGGDIKKSGELGKMFDIP D  K
Sbjct:     1 MGSRYASHQLSNGLFVSGRPEQPKEKPPTMSSVAMPYTGGDIKKSGELGKMFDIPTDGTK 60

Query:    61 SRKSGPITGAPSRTGSFAGAATHSGSIPNAAGRAGYNVXXXXXXXXXXXXXMKKTNSGPL 120
             SRKSGPITG  SR+G+       SG +PNA GR   N+             MKKTNSGPL
Sbjct:    61 SRKSGPITGGSSRSGA------QSGPVPNATGRMSGNLASAGSNS------MKKTNSGPL 108

Query:   121 NKHGEPIKKSSGPQSGGATRQNSGPIPPSLPATGLITSGPISSGPLNSSGAPRKLSGSLD 180
             +KHGEP+KKSSGPQSGG TRQNSGPIP  LP TGLITSGPI+SGPLNSSGAPRK+SG LD
Sbjct:   109 SKHGEPLKKSSGPQSGGVTRQNSGPIP-ILPTTGLITSGPITSGPLNSSGAPRKISGPLD 167

Query:   181 XXXXXXXXXXXIAQNQAVTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFILGAVH 240
                        +  NQAVTT+  EDD+S  K+FPKPVLWLVILIFVMGF+AGGFILGAVH
Sbjct:   168 YSGSMKTHMPSVVHNQAVTTLAPEDDFSCMKSFPKPVLWLVILIFVMGFLAGGFILGAVH 227

Query:   241 NPXXXXXXXXXXXXXXXXXXWNTCWGRKAITDFISCHPDTDLRTAKSGQFVKVTGVVTCG 300
             N                   WN    R+ ITDFI+ +PD DLRTAK+GQ+VKVTGVVTCG
Sbjct:   228 NAILLIVVAVLFTVVAALFIWNISCERRGITDFIARYPDADLRTAKNGQYVKVTGVVTCG 287

Query:   301 NVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYISDFQS 360
             NVPLESSF RVPRCVYTST LYEYR WGSKPAN  HR FTWGLRS ERHVVDFYISDFQS
Sbjct:   288 NVPLESSFHRVPRCVYTSTCLYEYRGWGSKPANASHRRFTWGLRSAERHVVDFYISDFQS 347

Query:   361 GLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSLSSDDRLMRLKEGYI 420
             GLRALVKTG+GA+VTP VDDSVVID KP N+  SP+F+RWLG+K+L++DDR+MRLKEGYI
Sbjct:   348 GLRALVKTGNGAKVTPLVDDSVVIDFKPGNEQASPDFVRWLGKKNLTNDDRIMRLKEGYI 407

Query:   421 KEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCEDTSNNDVIP 480
             KEGSTVSV+G+VQRNDNVLMIVP  EP+A GWQW+KC FPASLEGI+LRCED+SN D IP
Sbjct:   408 KEGSTVSVIGVVQRNDNVLMIVPTTEPLAAGWQWSKCTFPASLEGIVLRCEDSSNVDAIP 467

Query:   481 V 481
             V
Sbjct:   468 V 468


>TAIR|locus:2132075 [details] [associations]
            symbol:AT4G22290 "AT4G22290" species:3702 "Arabidopsis
            thaliana" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=ISS] EMBL:CP002687 GenomeReviews:CT486007_GR
            GO:GO:0006508 GO:GO:0008233 UniGene:At.47267 HOGENOM:HOG000242640
            ProtClustDB:CLSN2679796 EMBL:AY140104 EMBL:BT006592 IPI:IPI00534218
            RefSeq:NP_193960.2 UniGene:At.71029 PRIDE:Q8L6X7
            EnsemblPlants:AT4G22290.1 GeneID:828324 KEGG:ath:AT4G22290
            TAIR:At4g22290 InParanoid:Q8L6X7 OMA:AGRIQSH PhylomeDB:Q8L6X7
            Genevestigator:Q8L6X7 Uniprot:Q8L6X7
        Length = 445

 Score = 904 (323.3 bits), Expect = 1.2e-90, P = 1.2e-90
 Identities = 180/352 (51%), Positives = 233/352 (66%)

Query:   131 SGPQSGGATRQNSGPIPPSLPATGLITSGPI-SSGPLNSSGAPRKLSGSLDXXXXXXXXX 189
             SGP SG + ++ SGP+    P TGLITSG + SSGP+  SG+ R  SG LD         
Sbjct:   101 SGPNSG-SVKKFSGPLSQLQP-TGLITSGSLGSSGPI-LSGSRR--SGQLDHQLSNLASS 155

Query:   190 XXIAQNQAVTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFILGAVHNPXXXXXXX 249
                    +VT++   D        PK ++W V+++  MG + G F+  AV  P       
Sbjct:   156 KP-KYGSSVTSLNV-DPVRVGFKVPKAMVWAVLIVAAMGLLVGAFLTVAVKKPVVIAAVL 213

Query:   250 XXXXXXXXXXXWNTCWGRKAITDFISCHPDTDLRTAKSGQFVKVTGVVTCGNVPLESSFR 309
                        WN  W RK +  FI  +PD +LR A  GQFVKVTGVVTCG++PLESSF+
Sbjct:   214 AAVCPAIVVLVWNCVWRRKGLLSFIKKYPDAELRGAIDGQFVKVTGVVTCGSIPLESSFQ 273

Query:   310 RVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWGLRSLERHVVDFYISDFQSGLRALVKTG 369
             R PRCVY ST LYEY+ +G K ANPKHR F+WG R  E++V DFYISDFQSGLRALVK G
Sbjct:   274 RTPRCVYVSTELYEYKGFGGKSANPKHRCFSWGSRHAEKYVSDFYISDFQSGLRALVKAG 333

Query:   370 SGARVTPFVDDSVVIDIKPENKDLSPEFIRWLGQKSLSSDDRLMRLKEGYIKEGSTVSVM 429
              G++V+PFV  + V ++  +NKDLSP F++WL  ++LS+DDR+MRLKEGYIKEGSTVSVM
Sbjct:   334 YGSKVSPFVKPATVANVTTQNKDLSPSFLKWLSDRNLSADDRVMRLKEGYIKEGSTVSVM 393

Query:   430 GIVQRNDNVLMIVPPPEPIATGWQWTKCIFPASLEGIILRCEDTSNNDVIPV 481
             G+V+R+DNVLMIVPP E +++G +W  C+FP   +G+I+ C+D  N DVIPV
Sbjct:   394 GMVRRHDNVLMIVPPAEAVSSGCRWWHCLFPTYADGLIITCDDNQNADVIPV 445

 Score = 231 (86.4 bits), Expect = 1.2e-16, P = 1.2e-16
 Identities = 70/169 (41%), Positives = 93/169 (55%)

Query:     1 MGSRYPSHQLSNGLFVSGRPEQPKEKAPTMSSVAMPYTGGDIKKSGELGKMFDIPM-DSA 59
             M  R  SHQL NGL+VSG+ EQPKE+ PTM++ A+PYTGGDIKKSGELG+MFDI + DSA
Sbjct:     1 MAGRIQSHQLPNGLYVSGKLEQPKERPPTMAARAVPYTGGDIKKSGELGRMFDISVVDSA 60

Query:    60 KSRKSGP-ITGAPSRTGSFAGAATHSGSIPNAAGRAGYNVXXXXXXXXXXXXXMKKTNSG 118
               +   P I G     G+ +G  +   + P  +G +  N              +KK  SG
Sbjct:    61 SFQGPPPLIVG-----GNSSGGTSRLQAPPRVSGSSS-NPNSGSVRSGPNSGSVKKF-SG 113

Query:   119 PLNKHGEP---IKK----SSGPQSGGATRQNSGPIPPSLPATGLITSGP 160
             PL++  +P   I      SSGP   G+ R  SG +   L  + L +S P
Sbjct:   114 PLSQL-QPTGLITSGSLGSSGPILSGSRR--SGQLDHQL--SNLASSKP 157


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.134   0.411    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      481       439   0.00089  118 3  11 22  0.43    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  616 (65 KB)
  Total size of DFA:  271 KB (2143 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  37.97u 0.07s 38.04t   Elapsed:  00:00:01
  Total cpu time:  37.97u 0.07s 38.04t   Elapsed:  00:00:01
  Start:  Sat May 11 03:14:51 2013   End:  Sat May 11 03:14:52 2013

Back to top