Your job contains 1 sequence.
>011631
MAASLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDIN
KPNGQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAV
FSHSTADFFLSVGLGLGSTNTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADM
QKEGLRGRTLTLKLKTASFEVRTRAVTLQKYISSSEDILKHASVLLKAELPVSLRLIGLR
VTQFNEDKVRAPSDPTQKTLTNFMTSGHASKKIVGDQNSLGSDINDDCLIDDKETSVSLD
VSETNNYEFGDPVCDNSLPDLNDENCSFSNKISEVEKIHENEVSQLLEGNSLVLRQEEGS
CCDGVEEVDKDITPDNKVGTSSNQKDQFIWLDDYKCSLCGTEMPPSFIEERQEHSDFHLA
ERLQKEESGSDLRILTHRERCVRTQRDHIASHRKRKKQKLFEKEGTHIPIDMFFAKRNRN
F
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011631
(481 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2031050 - symbol:AT1G49980 species:3702 "Arabi... 1241 2.3e-126 1
UNIPROTKB|J9P5L3 - symbol:POLK "Uncharacterized protein" ... 476 3.9e-50 3
UNIPROTKB|E2RAS5 - symbol:POLK "Uncharacterized protein" ... 474 7.5e-50 3
ZFIN|ZDB-GENE-060526-137 - symbol:polk "polymerase (DNA d... 458 4.3e-49 3
UNIPROTKB|F1MAB3 - symbol:Polk "Protein Polk" species:101... 471 9.4e-49 2
UNIPROTKB|Q5Q9G8 - symbol:POLK "Polymerase kappa isoform ... 475 2.0e-48 2
UNIPROTKB|Q9UBT6 - symbol:POLK "DNA polymerase kappa" spe... 475 5.6e-48 2
UNIPROTKB|G3V8W7 - symbol:Polk "Protein Polk" species:101... 471 8.0e-48 2
UNIPROTKB|Q8AWW1 - symbol:DINB1 "Uncharacterized protein"... 440 2.4e-47 3
UNIPROTKB|F1S2I2 - symbol:POLK "Uncharacterized protein" ... 468 3.5e-47 2
MGI|MGI:1349767 - symbol:Polk "polymerase (DNA directed),... 464 4.8e-47 2
UNIPROTKB|F1NCT8 - symbol:POLK "Uncharacterized protein" ... 433 1.4e-46 3
UNIPROTKB|A6QNV6 - symbol:POLK "Uncharacterized protein" ... 459 3.4e-46 2
UNIPROTKB|E9PST4 - symbol:Polk "Protein Polk" species:101... 466 1.3e-43 1
UNIPROTKB|F1NCT7 - symbol:POLK "Uncharacterized protein" ... 416 8.5e-43 2
WB|WBGene00017696 - symbol:polk-1 species:6239 "Caenorhab... 422 2.2e-42 2
UNIPROTKB|E9PST3 - symbol:Polk "Protein Polk" species:101... 433 6.0e-40 1
UNIPROTKB|D6RAE5 - symbol:POLK "DNA polymerase kappa" spe... 378 1.9e-39 2
UNIPROTKB|Q5Q9G5 - symbol:POLK "DNA polymerase kappa" spe... 378 1.9e-39 2
UNIPROTKB|Q5Q9G7 - symbol:POLK "DNA polymerase kappa" spe... 378 1.9e-39 2
ASPGD|ASPL0000039840 - symbol:AN3373 species:162425 "Emer... 394 3.0e-36 1
UNIPROTKB|D6R9M8 - symbol:POLK "DNA polymerase kappa" spe... 340 1.9e-35 2
POMBASE|SPCC553.07c - symbol:kpa1 "DinB translesion DNA r... 345 4.8e-31 1
UNIPROTKB|Q71Y46 - symbol:dinB "DNA polymerase IV" specie... 266 1.5e-22 1
UNIPROTKB|Q83EN5 - symbol:dinP "DNA polymerase IV" specie... 270 3.3e-22 1
TIGR_CMR|CBU_0280 - symbol:CBU_0280 "DNA-damage-inducible... 270 3.3e-22 1
UNIPROTKB|Q8EHU9 - symbol:dinB "DNA polymerase IV" specie... 261 1.7e-21 1
TIGR_CMR|SO_1114 - symbol:SO_1114 "DNA-damage-inducible p... 261 1.7e-21 1
UNIPROTKB|Q47155 - symbol:dinB species:83333 "Escherichia... 257 3.1e-21 1
UNIPROTKB|Q74CQ6 - symbol:dinB "DNA polymerase IV" specie... 267 5.6e-21 1
TIGR_CMR|GSU_1616 - symbol:GSU_1616 "ImpB/MucB/SamB famil... 267 5.6e-21 1
TIGR_CMR|CPS_1040 - symbol:CPS_1040 "DNA polymerase IV" s... 240 7.3e-19 2
UNIPROTKB|Q3ZAI3 - symbol:dinB "DNA polymerase IV" specie... 243 3.3e-18 1
TIGR_CMR|DET_0011 - symbol:DET_0011 "DNA polymerase IV, p... 243 3.3e-18 1
UNIPROTKB|Q9KPS5 - symbol:dinB "DNA polymerase IV" specie... 220 1.1e-15 1
TIGR_CMR|VC_2287 - symbol:VC_2287 "DNA-damage-inducible p... 220 1.1e-15 1
UNIPROTKB|Q81M86 - symbol:dinB "DNA polymerase IV" specie... 222 1.2e-15 1
TIGR_CMR|BA_4366 - symbol:BA_4366 "DNA-damage-inducible p... 222 1.2e-15 1
TIGR_CMR|CHY_1651 - symbol:CHY_1651 "DNA polymerase IV - ... 219 2.2e-15 1
UNIPROTKB|Q74H50 - symbol:dinB "DNA polymerase IV" specie... 214 1.0e-14 1
TIGR_CMR|GSU_0043 - symbol:GSU_0043 "ImpB/MucB/SamB famil... 214 1.0e-14 1
DICTYBASE|DDB_G0287149 - symbol:DDB_G0287149 "UMUC-like D... 215 1.4e-14 1
UNIPROTKB|E2RC81 - symbol:POLH "Uncharacterized protein" ... 151 1.3e-13 3
FB|FBgn0037141 - symbol:DNApol-eta "DNApol-eta" species:7... 172 1.6e-13 3
UNIPROTKB|B4DG64 - symbol:POLH "DNA polymerase eta" speci... 159 5.0e-13 3
UNIPROTKB|Q0BZW2 - symbol:dinB "DNA polymerase IV" specie... 199 5.5e-13 1
UNIPROTKB|Q9Y253 - symbol:POLH "DNA polymerase eta" speci... 159 7.3e-13 3
UNIPROTKB|P63987 - symbol:dinB2 "DNA polymerase IV 2" spe... 184 1.5e-11 1
FB|FBgn0035150 - symbol:Rev1 "Rev1" species:7227 "Drosoph... 191 2.0e-11 1
TAIR|locus:2156309 - symbol:POLH "Y-family DNA polymerase... 182 6.4e-11 2
ZFIN|ZDB-GENE-060421-4949 - symbol:polh "polymerase (DNA ... 147 1.3e-10 4
ZFIN|ZDB-GENE-081105-180 - symbol:si:dkey-57a22.7 "si:dke... 183 2.0e-10 1
UNIPROTKB|F1MZ79 - symbol:POLH "Uncharacterized protein" ... 134 2.2e-09 3
UNIPROTKB|P63985 - symbol:dinB1 "DNA polymerase IV 1" spe... 166 3.3e-09 1
ASPGD|ASPL0000012133 - symbol:AN3909 species:162425 "Emer... 171 3.6e-09 1
UNIPROTKB|E2RPL9 - symbol:REV1 "Uncharacterized protein" ... 170 5.2e-09 1
UNIPROTKB|F1RRJ6 - symbol:POLH "Uncharacterized protein" ... 133 8.2e-09 3
UNIPROTKB|J3KTN3 - symbol:POLI "DNA polymerase iota" spec... 148 9.2e-09 2
ASPGD|ASPL0000072145 - symbol:AN4678 species:162425 "Emer... 153 1.2e-08 2
UNIPROTKB|F1P5H4 - symbol:REV1 "DNA repair protein REV1" ... 166 1.4e-08 1
UNIPROTKB|Q4KWZ7 - symbol:REV1 "DNA repair protein REV1" ... 166 1.4e-08 1
TAIR|locus:2156319 - symbol:REV1 species:3702 "Arabidopsi... 152 1.7e-08 2
RGD|1309893 - symbol:Polh "polymerase (DNA directed), eta... 149 2.8e-08 2
MGI|MGI:1891457 - symbol:Polh "polymerase (DNA directed),... 149 2.9e-08 2
TIGR_CMR|SPO_3280 - symbol:SPO_3280 "DNA polymerase IV, p... 156 3.5e-08 1
MGI|MGI:1929074 - symbol:Rev1 "REV1 homolog (S. cerevisia... 162 3.8e-08 1
RGD|1306715 - symbol:Rev1 "REV1, polymerase (DNA directed... 160 5.6e-08 1
UNIPROTKB|F1N787 - symbol:REV1 "Uncharacterized protein" ... 159 7.8e-08 1
UNIPROTKB|Q9UBZ9 - symbol:REV1 "DNA repair protein REV1" ... 156 1.7e-07 1
UNIPROTKB|F1STE9 - symbol:REV1 "Uncharacterized protein" ... 155 2.2e-07 1
UNIPROTKB|G5EH81 - symbol:MGCH7_ch7g688 "Sister chromatid... 132 2.8e-07 2
MGI|MGI:1347081 - symbol:Poli "polymerase (DNA directed),... 157 3.5e-07 3
UNIPROTKB|J3KRG0 - symbol:POLI "DNA polymerase iota" spec... 124 4.8e-07 1
UNIPROTKB|F1NCM3 - symbol:POLH "Uncharacterized protein" ... 144 5.8e-07 2
UNIPROTKB|F1PDA5 - symbol:POLI "Uncharacterized protein" ... 156 5.8e-07 2
UNIPROTKB|F1NAG6 - symbol:POLH "Uncharacterized protein" ... 144 6.5e-07 2
ZFIN|ZDB-GENE-050417-376 - symbol:poli "polymerase (DNA d... 153 7.9e-07 2
UNIPROTKB|J3KSW2 - symbol:POLI "DNA polymerase iota" spec... 152 1.2e-06 2
POMBASE|SPBC16A3.11 - symbol:eso1 "sister chromatid cohes... 130 1.5e-06 2
UNIPROTKB|Q9UNA4 - symbol:POLI "DNA polymerase iota" spec... 152 1.8e-06 2
FB|FBgn0037554 - symbol:DNApol-iota "DNApol-iota" species... 144 2.6e-06 2
RGD|1305212 - symbol:Poli "polymerase (DNA directed), iot... 146 8.0e-06 2
UNIPROTKB|F1MHR0 - symbol:POLI "Uncharacterized protein" ... 137 5.3e-05 2
CGD|CAL0001748 - symbol:orf19.4412 species:5476 "Candida ... 129 0.00013 1
WB|WBGene00018721 - symbol:polh-1 species:6239 "Caenorhab... 112 0.00019 3
POMBASE|SPBC1347.01c - symbol:rev1 "deoxycytidyl transfer... 125 0.00029 1
CGD|CAL0002818 - symbol:RAD32 species:5476 "Candida albic... 121 0.00056 3
>TAIR|locus:2031050 [details] [associations]
symbol:AT1G49980 species:3702 "Arabidopsis thaliana"
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006281 "DNA repair"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA]
HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 EMBL:CP002684 GO:GO:0016020 GO:GO:0003684
GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100 SUPFAM:SSF100879
KO:K03511 OMA:VHVDCDA HOGENOM:HOG000082709 EMBL:AY508701
IPI:IPI00540157 RefSeq:NP_175420.3 UniGene:At.43723 HSSP:Q97W02
ProteinModelPortal:Q6JDV7 SMR:Q6JDV7 EnsemblPlants:AT1G49980.1
GeneID:841422 KEGG:ath:AT1G49980 TAIR:At1g49980 InParanoid:Q6JDV7
PhylomeDB:Q6JDV7 ProtClustDB:CLSN2681525 Genevestigator:Q6JDV7
Uniprot:Q6JDV7
Length = 671
Score = 1241 (441.9 bits), Expect = 2.3e-126, P = 2.3e-126
Identities = 269/484 (55%), Positives = 335/484 (69%)
Query: 1 MAASLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDIN 60
+A SLDEAYLDITEVCRERG+SG EIAEELR+SVY E GLTCSAGVA NRLLAKVCSDIN
Sbjct: 195 IAGSLDEAYLDITEVCRERGLSGGEIAEELRSSVYSETGLTCSAGVAANRLLAKVCSDIN 254
Query: 61 KPNGQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAV 120
KPNGQFVL NDR VMTF+S LP+RKIGGIGKVTEHIL+D GI TCEEM+QKGSLL A+
Sbjct: 255 KPNGQFVLQNDRSTVMTFVSFLPVRKIGGIGKVTEHILKDALGIKTCEEMVQKGSLLYAL 314
Query: 121 FSHSTADFFLSVGLGLGSTNTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADM 180
FS S+ADFFLSVGLGLG TNTPQ R RKSISSERTF+ T D+ LLY KL E+AEMLS DM
Sbjct: 315 FSQSSADFFLSVGLGLGGTNTPQVRSRKSISSERTFAATGDERLLYSKLDELAEMLSHDM 374
Query: 181 QKEXXXXXXXXXXXXXASFEVRTRAVTLQKYISSSEDILKHASVLLKAELPVSLRLIGLR 240
+KE ASFE+R+RAV+LQ+Y SS+DILKHA+ LLKAELPVS+RLIGLR
Sbjct: 375 KKEGLTARTLTLKLKTASFEIRSRAVSLQRYTCSSDDILKHATKLLKAELPVSVRLIGLR 434
Query: 241 VTQFNEDKVRAPSDPTQKTLTNFMTSGHASKKI--VGDQNSLGSDINDDCLIDDKETSVS 298
++QF E+ +R SDP+Q T+T F+ +S++ + D +S D N +CL +D+ +VS
Sbjct: 435 MSQFVEE-IRN-SDPSQGTITKFIVQKDSSRQAQDLDDNDSFDLDANKNCLSNDESGNVS 492
Query: 299 LDVSETNNYEFGDPVCDNSLPDLNDENCSFSNK-ISEVEKIHENEVSQLLEGNSLVLRQE 357
ET++ D V + + + S K I E + + E Q+LEG+SL+ + +
Sbjct: 493 FGSHETSSAHLKDVV------EYEERSQIDSGKVIPNQECMKKEERLQILEGDSLLKKYK 546
Query: 358 EGSCCDGVEEVDKDITPDNKVGTSSNQKDQFIWLDDYKCSLCGTEMPPSFIEERQEHSDF 417
E C D + + + Q + W+D YKC LCG E+PPSF+EERQEHSDF
Sbjct: 547 E--CKPDTSHSMNDNSNATEAVSVFPQTEPLYWIDGYKCVLCGIELPPSFVEERQEHSDF 604
Query: 418 HLAERLQKEESGSDLRILTHRERCVRTQRDHIASHRKRKKQKLFEKEGT-HIPIDMFFAK 476
HLA+RLQ EE+GS + R + ++ + K KKQK +K+ + HIPI FF K
Sbjct: 605 HLAQRLQNEETGSSSSTTPSKRRILGKEK----VNSKPKKQKPDQKDSSKHIPIHAFFTK 660
Query: 477 RNRN 480
N+N
Sbjct: 661 SNQN 664
>UNIPROTKB|J9P5L3 [details] [associations]
symbol:POLK "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR006642 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 SMART:SM00734 GO:GO:0003684 GO:GO:0006281
GO:GO:0003887 Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 GeneTree:ENSGT00530000062942 KO:K03511 CTD:51426
EMBL:AAEX03002157 RefSeq:XP_536321.2 Ensembl:ENSCAFT00000046862
GeneID:479180 KEGG:cfa:479180 Uniprot:J9P5L3
Length = 861
Score = 476 (172.6 bits), Expect = 3.9e-50, Sum P(3) = 3.9e-50
Identities = 112/264 (42%), Positives = 159/264 (60%)
Query: 20 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQF-VLPNDRMAVMTF 78
G S E+ +E+R + ++ LT SAG+APN +LAKVCSD NKPNGQ+ VLPN R AVM F
Sbjct: 287 GTSAEEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQVLPN-RQAVMDF 345
Query: 79 ISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGS 138
I LPIRK+ GIGKVTE +L+ GI TC E+ Q+ +LL +FS ++ FL + LGLGS
Sbjct: 346 IKDLPIRKVSGIGKVTEKMLK-ALGIITCTELYQQRALLSLLFSETSWHHFLHISLGLGS 404
Query: 139 TNTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXAS 198
T+ + RKS+S ERTFS Y E+ L+ D+QKE +
Sbjct: 405 THLARDGERKSMSVERTFSEISKAEEQYNLCQELCSELAQDLQKEGLKGRTVTIKLKNVN 464
Query: 199 FEVRTRAVTLQKYISSSEDILKHASVLLKAEL------PVSLRLIGLRVTQF-NEDKVRA 251
FEV+TRA T+ +S++E+I A LL+ E+ P+ LRL+G+R++ F NE+ R
Sbjct: 465 FEVKTRASTVSSVVSTTEEIFAIAKELLRTEIDADFPHPLRLRLMGVRLSSFPNEEDKRH 524
Query: 252 PSDPTQKTLTNFMTSGHASKKIVG 275
Q+++ F+ +G+ S+ G
Sbjct: 525 Q----QRSIIGFLQAGNQSQSAPG 544
Score = 57 (25.1 bits), Expect = 3.9e-50, Sum P(3) = 3.9e-50
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 1 MAASLDEAYLDITEVCRER 19
+A SLDEAYL+IT+ +ER
Sbjct: 193 LAMSLDEAYLNITKHLQER 211
Score = 40 (19.1 bits), Expect = 3.9e-50, Sum P(3) = 3.9e-50
Identities = 28/141 (19%), Positives = 53/141 (37%)
Query: 290 IDDKETSV-SLDVSETNNYEFGDPVCD-N--SLPDLNDENCSFSNKISEVEKIHENEVSQ 345
++ KE S SE +YE + N LP+ D N + + + + H E
Sbjct: 669 VNKKENVYPSFSQSEKQDYETHQRNSEINFIELPETED-NPAKAESVDALSDKHSKEECA 727
Query: 346 LLEGNSLVLRQEEGSCCDGVEEVDKDITPDNKVGTSSNQKDQFIWLDDYKCSLCGTEMPP 405
L + + CC + ++ ++ + + S Q+ +L C +C E
Sbjct: 728 SLPSKPFNIEK----CC---QNSSSTVSLED-IASLSRQESSQPYLQALVCPVCNLEQKT 779
Query: 406 SFIEERQEHSDFHLAERLQKE 426
S + H D L + + +E
Sbjct: 780 SDLTLFNVHVDVCLNKGIIQE 800
>UNIPROTKB|E2RAS5 [details] [associations]
symbol:POLK "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR006642 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 SMART:SM00734 GO:GO:0005634 GO:GO:0003684
GO:GO:0003887 GO:GO:0006297 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 GeneTree:ENSGT00530000062942
OMA:TCTELYQ EMBL:AAEX03002157 Ensembl:ENSCAFT00000014935
Uniprot:E2RAS5
Length = 871
Score = 474 (171.9 bits), Expect = 7.5e-50, Sum P(3) = 7.5e-50
Identities = 113/266 (42%), Positives = 160/266 (60%)
Query: 20 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQF-VLPNDRMAVMTF 78
G S E+ +E+R + ++ LT SAG+APN +LAKVCSD NKPNGQ+ VLPN R AVM F
Sbjct: 295 GTSAEEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQVLPN-RQAVMDF 353
Query: 79 ISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGS 138
I LPIRK+ GIGKVTE +L+ GI TC E+ Q+ +LL +FS ++ FL + LGLGS
Sbjct: 354 IKDLPIRKVSGIGKVTEKMLK-ALGIITCTELYQQRALLSLLFSETSWHHFLHISLGLGS 412
Query: 139 TNTPQARF--RKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXX 196
T+ +R RKS+S ERTFS Y E+ L+ D+QKE
Sbjct: 413 THLASSRDGERKSMSVERTFSEISKAEEQYNLCQELCSELAQDLQKEGLKGRTVTIKLKN 472
Query: 197 ASFEVRTRAVTLQKYISSSEDILKHASVLLKAEL------PVSLRLIGLRVTQF-NEDKV 249
+FEV+TRA T+ +S++E+I A LL+ E+ P+ LRL+G+R++ F NE+
Sbjct: 473 VNFEVKTRASTVSSVVSTTEEIFAIAKELLRTEIDADFPHPLRLRLMGVRLSSFPNEEDK 532
Query: 250 RAPSDPTQKTLTNFMTSGHASKKIVG 275
R Q+++ F+ +G+ S+ G
Sbjct: 533 RHQ----QRSIIGFLQAGNQSQSAPG 554
Score = 57 (25.1 bits), Expect = 7.5e-50, Sum P(3) = 7.5e-50
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 1 MAASLDEAYLDITEVCRER 19
+A SLDEAYL+IT+ +ER
Sbjct: 201 LAMSLDEAYLNITKHLQER 219
Score = 40 (19.1 bits), Expect = 7.5e-50, Sum P(3) = 7.5e-50
Identities = 28/141 (19%), Positives = 53/141 (37%)
Query: 290 IDDKETSV-SLDVSETNNYEFGDPVCD-N--SLPDLNDENCSFSNKISEVEKIHENEVSQ 345
++ KE S SE +YE + N LP+ D N + + + + H E
Sbjct: 679 VNKKENVYPSFSQSEKQDYETHQRNSEINFIELPETED-NPAKAESVDALSDKHSKEECA 737
Query: 346 LLEGNSLVLRQEEGSCCDGVEEVDKDITPDNKVGTSSNQKDQFIWLDDYKCSLCGTEMPP 405
L + + CC + ++ ++ + + S Q+ +L C +C E
Sbjct: 738 SLPSKPFNIEK----CC---QNSSSTVSLED-IASLSRQESSQPYLQALVCPVCNLEQKT 789
Query: 406 SFIEERQEHSDFHLAERLQKE 426
S + H D L + + +E
Sbjct: 790 SDLTLFNVHVDVCLNKGIIQE 810
>ZFIN|ZDB-GENE-060526-137 [details] [associations]
symbol:polk "polymerase (DNA directed) kappa"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] HAMAP:MF_01113 InterPro:IPR001126
InterPro:IPR006642 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
SMART:SM00734 ZFIN:ZDB-GENE-060526-137 GO:GO:0003684 GO:GO:0006281
GO:GO:0003887 eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879
GeneTree:ENSGT00530000062942 HOVERGEN:HBG101212 OrthoDB:EOG4Z8XVV
EMBL:BX294131 IPI:IPI00806343 UniGene:Dr.86433 SMR:B0S5R3
Ensembl:ENSDART00000141039 OMA:FISTEDK Uniprot:B0S5R3
Length = 875
Score = 458 (166.3 bits), Expect = 4.3e-49, Sum P(3) = 4.3e-49
Identities = 105/256 (41%), Positives = 147/256 (57%)
Query: 20 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFI 79
G S E E+R + ++ LT SAG+APN +LAKVCSD NKPNGQ+ +P +R VM F+
Sbjct: 238 GTSAEEAVREMRFRIEQKTSLTASAGIAPNMMLAKVCSDKNKPNGQYRIPPERQVVMDFM 297
Query: 80 SSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGST 139
LP+RK+ G+GKVTE +L GI TC ++ Q+ +LL +FS ++ FL + LGLGST
Sbjct: 298 KDLPVRKVSGVGKVTEKMLA-ALGIVTCSQLGQQMALLSLLFSETSWHHFLHISLGLGST 356
Query: 140 NTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXASF 199
+ RKS+S+ERTF D Y E+ L+ D+Q+E F
Sbjct: 357 YMERDSERKSMSTERTFGEMSDAGEQYSLCKELCHDLAQDLQREGLKGKTVTLKLKNVKF 416
Query: 200 EVRTRAVTLQKYISSSEDILKHASVLLKAEL------PVSLRLIGLRVTQF--NEDKVRA 251
EV+T+A TLQ + + E+I A LLK E+ P+ LRL+G+RV+ F EDK
Sbjct: 417 EVKTKAFTLQYAVCTEEEIFAAAKDLLKVEIDSVSPQPLKLRLMGVRVSGFISTEDK--- 473
Query: 252 PSDPTQKTLTNFMTSG 267
P QK++ F+ G
Sbjct: 474 --KPLQKSIMGFLQKG 487
Score = 60 (26.2 bits), Expect = 4.3e-49, Sum P(3) = 4.3e-49
Identities = 13/19 (68%), Positives = 14/19 (73%)
Query: 1 MAASLDEAYLDITEVCRER 19
M SLDEAYLDITE +R
Sbjct: 193 MPMSLDEAYLDITEHLEQR 211
Score = 47 (21.6 bits), Expect = 4.3e-49, Sum P(3) = 4.3e-49
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 410 ERQEHSDFHLAERLQKEESG--SDL--RILTHRERC 441
+ EH+D AER Q+E SG S L + L H C
Sbjct: 643 DSNEHTDLSAAER-QEELSGEPSSLESKTLVHYSSC 677
Score = 42 (19.8 bits), Expect = 1.4e-48, Sum P(3) = 1.4e-48
Identities = 17/50 (34%), Positives = 24/50 (48%)
Query: 312 PVCDNSLPDLNDENCSFSNKISEVEK---IHENEVSQLLEGNSLVLRQEE 358
PVC+ + D+N +F+ I E K + NE + L S RQEE
Sbjct: 615 PVCNKEMKDVN--LTAFNQHIDECLKGSAMDSNEHTDL----SAAERQEE 658
>UNIPROTKB|F1MAB3 [details] [associations]
symbol:Polk "Protein Polk" species:10116 "Rattus
norvegicus" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001126
InterPro:IPR006642 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 SMART:SM00734 RGD:620058
GO:GO:0003684 GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100
SUPFAM:SSF100879 IPI:IPI00372895 Ensembl:ENSRNOT00000040799
ArrayExpress:F1MAB3 Uniprot:F1MAB3
Length = 711
Score = 471 (170.9 bits), Expect = 9.4e-49, Sum P(2) = 9.4e-49
Identities = 128/349 (36%), Positives = 183/349 (52%)
Query: 20 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFI 79
G S E+ +E+R + ++ LT SAG+APN +LAKVCSD NKPNGQ+ + R AVM FI
Sbjct: 150 GTSAEEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQIVPSRSAVMDFI 209
Query: 80 SSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGST 139
LPIRK+ GIGKVTE +L GI TC E+ Q+ +LL +FS S+ +FL V LGLGST
Sbjct: 210 KDLPIRKVSGIGKVTEKMLL-ALGIVTCTELYQQRALLSLLFSESSWHYFLHVALGLGST 268
Query: 140 NTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXASF 199
+ + RKS+S ERTFS Y E+ L+ D+QKE F
Sbjct: 269 DLARDGERKSMSVERTFSEINKTEEQYSLCQELCTELAHDLQKEGLKGRTVTIKLKNVDF 328
Query: 200 EVRTRAVTLQKYISSSEDILKHASVLLKAEL------PVSLRLIGLRVTQFNEDKVRAPS 253
EV+TRA T+ IS++EDI A LL+ E+ P+ LRL+G+R++ F+ D R
Sbjct: 329 EVKTRASTVPSAISTAEDIFAVAKELLRTEVTAGSPQPLRLRLMGVRMSTFSNDDDRKHQ 388
Query: 254 DPTQKTLTNFMTSGHASKKIVGDQNSLGSDINDDCLIDDKETSVSLDVSETNNYE-FGDP 312
Q+++ F+ +G+ G C D + + + ET+ + F D
Sbjct: 389 ---QRSIIGFLQAGNQGLSPTG------------CTADRTDKTELVKPLETSRKKSFFDK 433
Query: 313 VCDNSLPDLNDE-NCSFSNKISEVEKIHENEVSQLLEGNSLVLRQEEGS 360
+P+ D C KI+ + + +E SQ L+ S + E S
Sbjct: 434 KRSERIPNCQDPPRC----KIAGEQALQASEPSQALKKMSESFKTSENS 478
Score = 61 (26.5 bits), Expect = 9.4e-49, Sum P(2) = 9.4e-49
Identities = 13/19 (68%), Positives = 16/19 (84%)
Query: 1 MAASLDEAYLDITEVCRER 19
MA SLDEAYL+IT+ +ER
Sbjct: 56 MAMSLDEAYLNITQHLQER 74
>UNIPROTKB|Q5Q9G8 [details] [associations]
symbol:POLK "Polymerase kappa isoform 1" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR006642
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 SMART:SM00734
GO:GO:0005634 GO:GO:0003684 GO:GO:0006281 EMBL:AC010245
EMBL:AC116341 GO:GO:0003887 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 UniGene:Hs.732105 HGNC:HGNC:9183
HOVERGEN:HBG101212 EMBL:AC026424 EMBL:AY769929 IPI:IPI01013677
SMR:Q5Q9G8 STRING:Q5Q9G8 Ensembl:ENST00000380481 Uniprot:Q5Q9G8
Length = 780
Score = 475 (172.3 bits), Expect = 2.0e-48, Sum P(2) = 2.0e-48
Identities = 108/256 (42%), Positives = 156/256 (60%)
Query: 20 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQF-VLPNDRMAVMTF 78
G S E+ +E+R + ++ LT SAG+APN +LAKVCSD NKPNGQ+ +LPN R AVM F
Sbjct: 197 GTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPN-RQAVMDF 255
Query: 79 ISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGS 138
I LPIRK+ GIGKVTE +L+ GI TC E+ Q+ +LL +FS ++ +FL + LGLGS
Sbjct: 256 IKDLPIRKVSGIGKVTEKMLK-ALGIITCTELYQQRALLSLLFSETSWHYFLHISLGLGS 314
Query: 139 TNTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXAS 198
T+ + RKS+S ERTFS Y E+ L+ D+QKE +
Sbjct: 315 THLTRDGERKSMSVERTFSEINKAEEQYSLCQELCSELAQDLQKERLKGRTVTIKLKNVN 374
Query: 199 FEVRTRAVTLQKYISSSEDILKHASVLLKAEL------PVSLRLIGLRVTQFNEDKVRAP 252
FEV+TRA T+ +S++E+I A LLK E+ P+ LRL+G+R++ F ++ R
Sbjct: 375 FEVKTRASTVSSVVSTAEEIFAIAKELLKTEIDADFPHPLRLRLMGVRISSFPNEEDRKH 434
Query: 253 SDPTQKTLTNFMTSGH 268
Q+++ F+ +G+
Sbjct: 435 Q---QRSIIGFLQAGN 447
Score = 59 (25.8 bits), Expect = 2.0e-48, Sum P(2) = 2.0e-48
Identities = 13/19 (68%), Positives = 15/19 (78%)
Query: 1 MAASLDEAYLDITEVCRER 19
MA SLDEAYL+IT+ ER
Sbjct: 103 MAMSLDEAYLNITKHLEER 121
>UNIPROTKB|Q9UBT6 [details] [associations]
symbol:POLK "DNA polymerase kappa" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IMP]
InterPro:IPR001126 InterPro:IPR006642 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 SMART:SM00734 GO:GO:0005634 GO:GO:0046872
GO:GO:0003684 GO:GO:0006260 EMBL:CH471084 EMBL:AB036934
GO:GO:0003887 GO:GO:0006297 eggNOG:COG0389 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 KO:K03511
EMBL:AB027564 EMBL:AF163570 EMBL:AF194973 EMBL:AF315602
EMBL:AF318313 EMBL:AK091659 EMBL:AK314610 EMBL:AY273797
EMBL:BC014955 EMBL:BC050718 EMBL:AB036935 IPI:IPI00033151
IPI:IPI00218100 IPI:IPI00552440 IPI:IPI00552703 RefSeq:NP_057302.1
UniGene:Hs.732105 PDB:1T94 PDB:2OH2 PDB:2W7O PDB:2W7P PDB:3IN5
PDB:3PZP PDBsum:1T94 PDBsum:2OH2 PDBsum:2W7O PDBsum:2W7P
PDBsum:3IN5 PDBsum:3PZP ProteinModelPortal:Q9UBT6 SMR:Q9UBT6
IntAct:Q9UBT6 STRING:Q9UBT6 PhosphoSite:Q9UBT6 DMDM:59798438
PaxDb:Q9UBT6 PRIDE:Q9UBT6 Ensembl:ENST00000241436
Ensembl:ENST00000352007 Ensembl:ENST00000508526
Ensembl:ENST00000510815 Ensembl:ENST00000515295 GeneID:51426
KEGG:hsa:51426 UCSC:uc003kdw.3 UCSC:uc003keb.3 UCSC:uc010izq.3
CTD:51426 GeneCards:GC05P074843 HGNC:HGNC:9183 MIM:605650
neXtProt:NX_Q9UBT6 PharmGKB:PA33503 HOVERGEN:HBG101212
InParanoid:Q9UBT6 OMA:TCTELYQ OrthoDB:EOG4Z8XVV BindingDB:Q9UBT6
ChEMBL:CHEMBL5365 EvolutionaryTrace:Q9UBT6 GenomeRNAi:51426
NextBio:54977 ArrayExpress:Q9UBT6 Bgee:Q9UBT6 Genevestigator:Q9UBT6
Uniprot:Q9UBT6
Length = 870
Score = 475 (172.3 bits), Expect = 5.6e-48, Sum P(2) = 5.6e-48
Identities = 108/256 (42%), Positives = 156/256 (60%)
Query: 20 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQF-VLPNDRMAVMTF 78
G S E+ +E+R + ++ LT SAG+APN +LAKVCSD NKPNGQ+ +LPN R AVM F
Sbjct: 287 GTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPN-RQAVMDF 345
Query: 79 ISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGS 138
I LPIRK+ GIGKVTE +L+ GI TC E+ Q+ +LL +FS ++ +FL + LGLGS
Sbjct: 346 IKDLPIRKVSGIGKVTEKMLK-ALGIITCTELYQQRALLSLLFSETSWHYFLHISLGLGS 404
Query: 139 TNTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXAS 198
T+ + RKS+S ERTFS Y E+ L+ D+QKE +
Sbjct: 405 THLTRDGERKSMSVERTFSEINKAEEQYSLCQELCSELAQDLQKERLKGRTVTIKLKNVN 464
Query: 199 FEVRTRAVTLQKYISSSEDILKHASVLLKAEL------PVSLRLIGLRVTQFNEDKVRAP 252
FEV+TRA T+ +S++E+I A LLK E+ P+ LRL+G+R++ F ++ R
Sbjct: 465 FEVKTRASTVSSVVSTAEEIFAIAKELLKTEIDADFPHPLRLRLMGVRISSFPNEEDRKH 524
Query: 253 SDPTQKTLTNFMTSGH 268
Q+++ F+ +G+
Sbjct: 525 Q---QRSIIGFLQAGN 537
Score = 59 (25.8 bits), Expect = 5.6e-48, Sum P(2) = 5.6e-48
Identities = 13/19 (68%), Positives = 15/19 (78%)
Query: 1 MAASLDEAYLDITEVCRER 19
MA SLDEAYL+IT+ ER
Sbjct: 193 MAMSLDEAYLNITKHLEER 211
>UNIPROTKB|G3V8W7 [details] [associations]
symbol:Polk "Protein Polk" species:10116 "Rattus
norvegicus" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IEA]
HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR006642
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 SMART:SM00734 RGD:620058
GO:GO:0003684 GO:GO:0006281 GO:GO:0003887 EMBL:CH473955
Gene3D:3.30.1490.100 SUPFAM:SSF100879 GeneTree:ENSGT00530000062942
OMA:TCTELYQ UniGene:Rn.92419 Ensembl:ENSRNOT00000033952
Uniprot:G3V8W7
Length = 851
Score = 471 (170.9 bits), Expect = 8.0e-48, Sum P(2) = 8.0e-48
Identities = 128/349 (36%), Positives = 183/349 (52%)
Query: 20 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFI 79
G S E+ +E+R + ++ LT SAG+APN +LAKVCSD NKPNGQ+ + R AVM FI
Sbjct: 286 GTSAEEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQIVPSRSAVMDFI 345
Query: 80 SSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGST 139
LPIRK+ GIGKVTE +L GI TC E+ Q+ +LL +FS S+ +FL V LGLGST
Sbjct: 346 KDLPIRKVSGIGKVTEKMLL-ALGIVTCTELYQQRALLSLLFSESSWHYFLHVALGLGST 404
Query: 140 NTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXASF 199
+ + RKS+S ERTFS Y E+ L+ D+QKE F
Sbjct: 405 DLARDGERKSMSVERTFSEINKTEEQYSLCQELCTELAHDLQKEGLKGRTVTIKLKNVDF 464
Query: 200 EVRTRAVTLQKYISSSEDILKHASVLLKAEL------PVSLRLIGLRVTQFNEDKVRAPS 253
EV+TRA T+ IS++EDI A LL+ E+ P+ LRL+G+R++ F+ D R
Sbjct: 465 EVKTRASTVPSAISTAEDIFAVAKELLRTEVTAGSPQPLRLRLMGVRMSTFSNDDDRKHQ 524
Query: 254 DPTQKTLTNFMTSGHASKKIVGDQNSLGSDINDDCLIDDKETSVSLDVSETNNYE-FGDP 312
Q+++ F+ +G+ G C D + + + ET+ + F D
Sbjct: 525 ---QRSIIGFLQAGNQGLSPTG------------CTADRTDKTELVKPLETSRKKSFFDK 569
Query: 313 VCDNSLPDLNDE-NCSFSNKISEVEKIHENEVSQLLEGNSLVLRQEEGS 360
+P+ D C KI+ + + +E SQ L+ S + E S
Sbjct: 570 KRSERIPNCQDPPRC----KIAGEQALQASEPSQALKKMSESFKTSENS 614
Score = 61 (26.5 bits), Expect = 8.0e-48, Sum P(2) = 8.0e-48
Identities = 13/19 (68%), Positives = 16/19 (84%)
Query: 1 MAASLDEAYLDITEVCRER 19
MA SLDEAYL+IT+ +ER
Sbjct: 192 MAMSLDEAYLNITQHLQER 210
>UNIPROTKB|Q8AWW1 [details] [associations]
symbol:DINB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006281 "DNA repair"
evidence=TAS] [GO:0019985 "translesion synthesis" evidence=TAS]
HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR006642
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 SMART:SM00734
GO:GO:0005654 GO:GO:0003684 Reactome:REACT_115612 GO:GO:0003887
GO:GO:0006297 GO:GO:0019985 eggNOG:COG0389 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 HSSP:P96022
GeneTree:ENSGT00530000062942 HOGENOM:HOG000082711 KO:K03511
CTD:51426 HOVERGEN:HBG101212 OMA:TCTELYQ EMBL:AADN02067159
EMBL:AADN02067160 EMBL:AADN02067161 EMBL:AY118271 IPI:IPI00586140
RefSeq:NP_989514.1 UniGene:Gga.42393 SMR:Q8AWW1 STRING:Q8AWW1
Ensembl:ENSGALT00000024123 GeneID:374003 KEGG:gga:374003
InParanoid:Q8AWW1 NextBio:20813531 Uniprot:Q8AWW1
Length = 867
Score = 440 (159.9 bits), Expect = 2.4e-47, Sum P(3) = 2.4e-47
Identities = 102/254 (40%), Positives = 151/254 (59%)
Query: 20 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFI 79
G S E +E+R + ++ LT SAG+APN +LAK+CSD NKPNGQ + +R AV+ FI
Sbjct: 280 GTSAEEAVKEIRFRIEQKTQLTASAGIAPNTMLAKMCSDRNKPNGQCRISPERQAVLDFI 339
Query: 80 SSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGST 139
LPIRK+ GIGKVTE +L+ GI TC E+ Q+ +LL +FS ++ FL + LGLGST
Sbjct: 340 KDLPIRKVPGIGKVTEKMLK-ALGIVTCSELYQQRALLSLLFSEASWRSFLDISLGLGST 398
Query: 140 NTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXASF 199
+ + RKS+S+ERTFS Y E+ L+ D+QKE +F
Sbjct: 399 HLEKDGERKSMSTERTFSEISKAEDQYSLCQELCRELAQDLQKEGLKGKTVTLKLKNVNF 458
Query: 200 EVRTRAVTLQKYISSSEDILKHASVLLKAEL------PVSLRLIGLRVTQFNEDKVRAPS 253
EV+TRA T+ +S+ ++I A +LL E+ P+ +RL+G+RV+ F ++ +
Sbjct: 459 EVKTRASTVLSSVSTEDEIFAVAKMLLGTEIDSVAPHPLRIRLMGVRVSGFLSEEEKKYQ 518
Query: 254 DPTQKTLTNFMTSG 267
QK++ +F+ SG
Sbjct: 519 ---QKSIKSFLKSG 529
Score = 56 (24.8 bits), Expect = 2.4e-47, Sum P(3) = 2.4e-47
Identities = 26/107 (24%), Positives = 45/107 (42%)
Query: 322 NDENCSFSNKISEVEKIHENE-VSQLLEGNSLVLRQEEGSC-CDGVEEVDKDITPDNKVG 379
N EN + +++ S + + ++ L N+L + G GV+ + NKV
Sbjct: 543 NQENLTKNSEASSRGSFFDKKRAARQLNSNNLFPNESVGKQHFHGVKSSANFVEEANKV- 601
Query: 380 TSSNQKDQFIWLDDYKCSLCGTEMPPSFIEERQEHSDFHLAERLQKE 426
+ QK + + C +C E S +EE H D LA L ++
Sbjct: 602 -TDLQKSNVCEI--FTCPVCFEEQSSSNLEEINRHVDECLAGSLVED 645
Score = 53 (23.7 bits), Expect = 2.4e-47, Sum P(3) = 2.4e-47
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 1 MAASLDEAYLDITEVCRER 19
M LDEAYL++TE ER
Sbjct: 194 MPMGLDEAYLNVTEHLEER 212
>UNIPROTKB|F1S2I2 [details] [associations]
symbol:POLK "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006297 "nucleotide-excision repair, DNA gap filling"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR006642 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 SMART:SM00734 GO:GO:0005634 GO:GO:0003684
GO:GO:0003887 GO:GO:0006297 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 GeneTree:ENSGT00530000062942
KO:K03511 CTD:51426 OMA:TCTELYQ EMBL:CU466449 RefSeq:XP_003123756.1
Ensembl:ENSSSCT00000015383 GeneID:100518650 KEGG:ssc:100518650
Uniprot:F1S2I2
Length = 878
Score = 468 (169.8 bits), Expect = 3.5e-47, Sum P(2) = 3.5e-47
Identities = 128/370 (34%), Positives = 193/370 (52%)
Query: 20 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQF-VLPNDRMAVMTF 78
G S E+ +E+R + ++ LT SAG+APN +LAKVCSD NKPNGQ+ +LPN R VM F
Sbjct: 294 GTSAEEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPN-RQVVMDF 352
Query: 79 ISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGS 138
I LPIRK+ GIGKVTE +L+ GI TC ++ Q+ +LL +FS ++ +FL + LGLGS
Sbjct: 353 IKDLPIRKVSGIGKVTEKMLK-ALGIITCTDLYQQRALLSLLFSETSWHYFLHISLGLGS 411
Query: 139 TNTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXAS 198
T P+ RKS+S ERTFS Y E+ L+ D+QKE
Sbjct: 412 TCLPRDGERKSMSVERTFSEINKAEEQYSLCQELCSELAQDLQKEGLKGRTVTLKLKNVD 471
Query: 199 FEVRTRAVTLQKYISSSEDILKHASVLLKAEL------PVSLRLIGLRVTQF-NEDKVRA 251
FEV+TRA T+ IS++E+I A LL+ E+ P+ LRL+G+R++ F NE++ +
Sbjct: 472 FEVKTRASTVLSVISTAEEIFAIAKELLRTEIDADFPHPLRLRLMGVRLSSFPNEEEKKH 531
Query: 252 PSDPTQKTLTNFMTSGHASKKIVG------DQNSLGSDI---NDDCLIDDKETSVSLDVS 302
Q+++ F+ G+ + G D++ + + D K + L
Sbjct: 532 Q----QRSIIGFLQPGNQTLSATGCMLEKTDKDQFPKPLEMSHKKSFFDKKRSERKLSHQ 587
Query: 303 ETNNYEFGDPVCDNSLPDLNDENCSFSNKISEVEKIHENEVSQLLEGNSLVLRQEEGSCC 362
+T E D SLP + +E + ++ Q+ V +E+GS
Sbjct: 588 DTFKSEIVDR---QSLPTSQSFQVLKKKRSENLETLENSDNGQVF--TCPVCFREQGSI- 641
Query: 363 DGVEEVDKDI 372
G+E +K +
Sbjct: 642 -GLEAFNKHV 650
Score = 59 (25.8 bits), Expect = 3.5e-47, Sum P(2) = 3.5e-47
Identities = 13/19 (68%), Positives = 15/19 (78%)
Query: 1 MAASLDEAYLDITEVCRER 19
MA SLDEAYL+IT+ ER
Sbjct: 200 MALSLDEAYLNITKHLEER 218
>MGI|MGI:1349767 [details] [associations]
symbol:Polk "polymerase (DNA directed), kappa" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IMP] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008152 "metabolic process"
evidence=TAS] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR006642 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
SMART:SM00734 MGI:MGI:1349767 GO:GO:0005634 GO:GO:0046872
GO:GO:0003684 GO:GO:0006260 GO:GO:0006281 GO:GO:0003887
GO:GO:0006297 eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879
CleanEx:MM_POLK PDB:4FJO PDBsum:4FJO GeneTree:ENSGT00530000062942
HOGENOM:HOG000082711 KO:K03511 CTD:51426 HOVERGEN:HBG101212
OMA:TCTELYQ OrthoDB:EOG4Z8XVV EMBL:AB027563 EMBL:AF163571
EMBL:AB040765 EMBL:BC052820 IPI:IPI00131620 IPI:IPI00462547
RefSeq:NP_036178.1 UniGene:Mm.89926 PDB:2LSJ PDBsum:2LSJ
ProteinModelPortal:Q9QUG2 SMR:Q9QUG2 IntAct:Q9QUG2 STRING:Q9QUG2
PhosphoSite:Q9QUG2 PRIDE:Q9QUG2 Ensembl:ENSMUST00000022172
GeneID:27015 KEGG:mmu:27015 UCSC:uc007rne.1 InParanoid:Q9QUG2
NextBio:304949 Bgee:Q9QUG2 Genevestigator:Q9QUG2
GermOnline:ENSMUSG00000021668 Uniprot:Q9QUG2
Length = 852
Score = 464 (168.4 bits), Expect = 4.8e-47, Sum P(2) = 4.8e-47
Identities = 109/264 (41%), Positives = 158/264 (59%)
Query: 20 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQF-VLPNDRMAVMTF 78
G S E+ +E+R + ++ LT SAG+APN +LAKVCSD NKPNGQ+ +LP+ R AVM F
Sbjct: 286 GTSAEEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPS-RSAVMDF 344
Query: 79 ISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGS 138
I LPIRK+ GIGKVTE +L GI TC E+ Q+ +LL +FS ++ +FL + LGLGS
Sbjct: 345 IKDLPIRKVSGIGKVTEKMLM-ALGIVTCTELYQQRALLSLLFSETSWHYFLHIALGLGS 403
Query: 139 TNTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXAS 198
T+ + RKS+S ERTFS Y E+ L+ D+QKE +
Sbjct: 404 TDLARDGERKSMSVERTFSEISKTEEQYSLCQELCAELAHDLQKEGLKGRTVTIKLKNVN 463
Query: 199 FEVRTRAVTLQKYISSSEDILKHASVLLKAEL------PVSLRLIGLRVTQFNEDKVRAP 252
FEV+TRA T+ IS++E+I A LL+ E+ P+ LRL+G+R++ F+ + R
Sbjct: 464 FEVKTRASTVPAAISTAEEIFAIAKELLRTEVNVGSPHPLRLRLMGVRMSTFSSEDDRKH 523
Query: 253 SDPTQKTLTNFMTSGHASKKIVGD 276
Q+++ F+ +G+ + GD
Sbjct: 524 Q---QRSIIGFLQAGNQALSSTGD 544
Score = 61 (26.5 bits), Expect = 4.8e-47, Sum P(2) = 4.8e-47
Identities = 13/19 (68%), Positives = 16/19 (84%)
Query: 1 MAASLDEAYLDITEVCRER 19
MA SLDEAYL+IT+ +ER
Sbjct: 192 MAMSLDEAYLNITQHLQER 210
>UNIPROTKB|F1NCT8 [details] [associations]
symbol:POLK "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] HAMAP:MF_01113 InterPro:IPR001126
InterPro:IPR006642 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
SMART:SM00734 GO:GO:0003684 GO:GO:0006281 GO:GO:0003887
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 GeneTree:ENSGT00530000062942 EMBL:AADN02067159
EMBL:AADN02067160 EMBL:AADN02067161 IPI:IPI00680917
Ensembl:ENSGALT00000032847 ArrayExpress:F1NCT8 Uniprot:F1NCT8
Length = 862
Score = 433 (157.5 bits), Expect = 1.4e-46, Sum P(3) = 1.4e-46
Identities = 102/255 (40%), Positives = 151/255 (59%)
Query: 20 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFI 79
G S E +E+R + ++ LT SAG+APN +LAK+CSD NKPNGQ + +R AV+ FI
Sbjct: 276 GTSAEEAVKEIRFRIEQKTQLTASAGIAPNTMLAKMCSDRNKPNGQCRISPERQAVLDFI 335
Query: 80 SSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGST 139
LPIRK+ GIGKVTE +L+ GI TC E+ Q+ +LL +FS ++ FL + LGLGST
Sbjct: 336 KDLPIRKVPGIGKVTEKMLK-ALGIVTCSELYQQRALLSLLFSEASWRSFLDISLGLGST 394
Query: 140 NTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXASF 199
+ + RKS+S+ERTFS Y E+ L+ D+QKE +F
Sbjct: 395 HLEKDGERKSMSTERTFSEISKAEDQYSLCQELCRELAQDLQKEGLKGKTVTLKLKNVNF 454
Query: 200 EVRTRAVTLQKYISSSEDILKHASVLLKAEL------PVSLRL-IGLRVTQFNEDKVRAP 252
EV+TRA T+ +S+ ++I A +LL E+ P+ +RL +G+RV+ F ++ +
Sbjct: 455 EVKTRASTVLSSVSTEDEIFAVAKMLLGTEIDSVAPHPLRIRLMVGVRVSGFLSEEEKKY 514
Query: 253 SDPTQKTLTNFMTSG 267
QK++ +F+ SG
Sbjct: 515 Q---QKSIKSFLKSG 526
Score = 56 (24.8 bits), Expect = 1.4e-46, Sum P(3) = 1.4e-46
Identities = 26/107 (24%), Positives = 45/107 (42%)
Query: 322 NDENCSFSNKISEVEKIHENE-VSQLLEGNSLVLRQEEGSC-CDGVEEVDKDITPDNKVG 379
N EN + +++ S + + ++ L N+L + G GV+ + NKV
Sbjct: 540 NQENLTKNSEASSRGSFFDKKRAARQLNSNNLFPNESVGKQHFHGVKSSANFVEEANKV- 598
Query: 380 TSSNQKDQFIWLDDYKCSLCGTEMPPSFIEERQEHSDFHLAERLQKE 426
+ QK + + C +C E S +EE H D LA L ++
Sbjct: 599 -TDLQKSNVCEI--FTCPVCFEEQSSSNLEEINRHVDECLAGSLVED 642
Score = 53 (23.7 bits), Expect = 1.4e-46, Sum P(3) = 1.4e-46
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 1 MAASLDEAYLDITEVCRER 19
M LDEAYL++TE ER
Sbjct: 193 MPMGLDEAYLNVTEHLEER 211
>UNIPROTKB|A6QNV6 [details] [associations]
symbol:POLK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006297 "nucleotide-excision repair, DNA gap filling"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR006642 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 SMART:SM00734 GO:GO:0005634 GO:GO:0003684
GO:GO:0003887 GO:GO:0006297 eggNOG:COG0389 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879
GeneTree:ENSGT00530000062942 HOGENOM:HOG000082711 KO:K03511
CTD:51426 HOVERGEN:HBG101212 OMA:TCTELYQ OrthoDB:EOG4Z8XVV
EMBL:DAAA02027742 EMBL:DAAA02027743 EMBL:BC149024 IPI:IPI00867010
RefSeq:NP_001095728.1 UniGene:Bt.38144 SMR:A6QNV6 STRING:A6QNV6
Ensembl:ENSBTAT00000005265 GeneID:541218 KEGG:bta:541218
InParanoid:A6QNV6 NextBio:20879073 Uniprot:A6QNV6
Length = 877
Score = 459 (166.6 bits), Expect = 3.4e-46, Sum P(2) = 3.4e-46
Identities = 108/264 (40%), Positives = 158/264 (59%)
Query: 20 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQF-VLPNDRMAVMTF 78
G S E+ +E+R + ++ LT SAG+APN +LAKVCSD NKPNGQ+ +LPN R AVM F
Sbjct: 294 GTSAEEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPN-RQAVMDF 352
Query: 79 ISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGS 138
I LPIRK+ GIGKVTE +L+ GI TC E+ Q+ +LL +FS ++ FL + LGLGS
Sbjct: 353 IKDLPIRKVSGIGKVTEKMLK-ALGIITCTELYQQRALLSLLFSETSWHHFLHISLGLGS 411
Query: 139 TNTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXAS 198
T+ + RKS+S ERTFS Y E+ L+ D+QK+ +
Sbjct: 412 THLARDGERKSMSVERTFSEISKAEEQYSLCQELCSELAQDLQKKGLKGRTVTIKLKNVN 471
Query: 199 FEVRTRAVTLQKYISSSEDILKHASVLLKAEL------PVSLRLIGLRVTQF-NEDKVRA 251
FEV+TRA T+ +S++E+I A LL+ E+ P+ LRL+G+R++ F NE++ +
Sbjct: 472 FEVKTRASTVSTVVSTAEEIFVIAKELLRTEIDADFPQPLRLRLMGVRLSGFPNEEEKKH 531
Query: 252 PSDPTQKTLTNFMTSGHASKKIVG 275
Q+++ F+ G+ + G
Sbjct: 532 Q----QRSIIGFLQPGNQALSATG 551
Score = 59 (25.8 bits), Expect = 3.4e-46, Sum P(2) = 3.4e-46
Identities = 13/19 (68%), Positives = 15/19 (78%)
Query: 1 MAASLDEAYLDITEVCRER 19
MA SLDEAYL+IT+ ER
Sbjct: 200 MAMSLDEAYLNITKHLEER 218
>UNIPROTKB|E9PST4 [details] [associations]
symbol:Polk "Protein Polk" species:10116 "Rattus
norvegicus" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR006642 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 SMART:SM00734 RGD:620058 GO:GO:0005737
GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 GO:GO:0006281
GO:GO:0003887 Gene3D:3.30.1490.100 SUPFAM:SSF100879 IPI:IPI00777177
Ensembl:ENSRNOT00000061462 ArrayExpress:E9PST4 Uniprot:E9PST4
Length = 771
Score = 466 (169.1 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 136/368 (36%), Positives = 191/368 (51%)
Query: 1 MAASLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDIN 60
MA SLDEAYL+IT+ +ER G E+ R + + G G+APN +LAKVCSD N
Sbjct: 192 MAMSLDEAYLNITQHLQER--QGWP--EDKRR-YFIKMGNCRKIGIAPNTMLAKVCSDKN 246
Query: 61 KPNGQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAV 120
KPNGQ+ + R AVM FI LPIRK+ GIGKVTE +L GI TC E+ Q+ +LL +
Sbjct: 247 KPNGQYQIVPSRSAVMDFIKDLPIRKVSGIGKVTEKMLL-ALGIVTCTELYQQRALLSLL 305
Query: 121 FSHSTADFFLSVGLGLGSTNTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADM 180
FS S+ +FL V LGLGST+ + RKS+S ERTFS Y E+ L+ D+
Sbjct: 306 FSESSWHYFLHVALGLGSTDLARDGERKSMSVERTFSEINKTEEQYSLCQELCTELAHDL 365
Query: 181 QKEXXXXXXXXXXXXXASFEVRTRAVTLQKYISSSEDILKHASVLLKAEL------PVSL 234
QKE FEV+TRA T+ IS++EDI A LL+ E+ P+ L
Sbjct: 366 QKEGLKGRTVTIKLKNVDFEVKTRASTVPSAISTAEDIFAVAKELLRTEVTAGSPQPLRL 425
Query: 235 RLIGLRVTQFNEDKVRAPSDPTQKTLTNFMTSGHASKKIVGDQNSLGSDINDDCLIDDKE 294
RL+G+R++ F+ D R Q+++ F+ +G+ G C D +
Sbjct: 426 RLMGVRMSTFSNDDDRKHQ---QRSIIGFLQAGNQGLSPTG------------CTADRTD 470
Query: 295 TSVSLDVSETNNYE-FGDPVCDNSLPDLNDE-NCSFSNKISEVEKIHENEVSQLLEGNSL 352
+ + ET+ + F D +P+ D C KI+ + + +E SQ L+ S
Sbjct: 471 KTELVKPLETSRKKSFFDKKRSERIPNCQDPPRC----KIAGEQALQASEPSQALKKMSE 526
Query: 353 VLRQEEGS 360
+ E S
Sbjct: 527 SFKTSENS 534
>UNIPROTKB|F1NCT7 [details] [associations]
symbol:POLK "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] HAMAP:MF_01113 InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0003684
GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 GeneTree:ENSGT00530000062942
EMBL:AADN02067159 EMBL:AADN02067160 EMBL:AADN02067161
IPI:IPI00680100 Ensembl:ENSGALT00000032848 ArrayExpress:F1NCT7
Uniprot:F1NCT7
Length = 543
Score = 416 (151.5 bits), Expect = 8.5e-43, Sum P(2) = 8.5e-43
Identities = 102/253 (40%), Positives = 144/253 (56%)
Query: 20 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFI 79
G S E +E+R + ++ LT SAG+APN +LAK+CSD NKPNGQ + +R AV+ FI
Sbjct: 281 GTSAEEAVKEIRFRIEQKTQLTASAGIAPNTMLAKMCSDRNKPNGQCRISPERQAVLDFI 340
Query: 80 SSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGST 139
LPIRK+ GIGKVTE +L+ GI TC E+ Q+ +LL +FS ++ FL + LGLGST
Sbjct: 341 KDLPIRKVPGIGKVTEKMLK-ALGIVTCSELYQQRALLSLLFSEASWRSFLDISLGLGST 399
Query: 140 NTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXASF 199
+ + RKS+S+ERTFS Y E+ L+ D+QKE +F
Sbjct: 400 HLEKDGERKSMSTERTFSEISKAEDQYSLCQELCRELAQDLQKEGLKGKTVTLKLKNVNF 459
Query: 200 EVRTRAVTLQKYISSSEDILKHASVLLKAELPVSLRLIGLRVTQFNEDKVRAPSDPTQKT 259
EV+TRA T+ +S+ ++I A +LL E+ S+ LR+ D +R S +
Sbjct: 460 EVKTRASTVLSSVSTEDEIFAVAKMLLGTEID-SVAPHPLRIRLM--DSLRKTSQ-RKAA 515
Query: 260 LTNFMTSGHASKK 272
+ TS ASKK
Sbjct: 516 WSGLTTSQSASKK 528
Score = 53 (23.7 bits), Expect = 8.5e-43, Sum P(2) = 8.5e-43
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 1 MAASLDEAYLDITEVCRER 19
M LDEAYL++TE ER
Sbjct: 193 MPMGLDEAYLNVTEHLEER 211
>WB|WBGene00017696 [details] [associations]
symbol:polk-1 species:6239 "Caenorhabditis elegans"
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0006281 GO:GO:0003887 EMBL:FO080222 eggNOG:COG0389
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 EMBL:FO080380 GeneTree:ENSGT00530000062942
PIR:S44637 RefSeq:NP_001122692.1 RefSeq:NP_001122693.1
UniGene:Cel.10581 ProteinModelPortal:P34409 SMR:P34409
STRING:P34409 EnsemblMetazoa:F22B7.6a GeneID:176209
KEGG:cel:CELE_F22B7.6 UCSC:F22B7.6b.2 CTD:176209 WormBase:F22B7.6a
WormBase:F22B7.6b HOGENOM:HOG000082711 InParanoid:P34409 KO:K03511
OMA:FMLAKIC NextBio:891590 Uniprot:P34409
Length = 596
Score = 422 (153.6 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 113/278 (40%), Positives = 156/278 (56%)
Query: 18 ERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMT 77
E G E E+R V + GLTCSAG+A N +LAK+CSD+NKPNGQ+VL ND+ A+M
Sbjct: 247 EFGTGREEAVREIRFRVEQLTGLTCSAGIASNFMLAKICSDLNKPNGQYVLENDKNAIME 306
Query: 78 FISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGL- 136
F+ LPIRK+GGIG+V E L+ I T +M K +L F+ + + FL LGL
Sbjct: 307 FLKDLPIRKVGGIGRVCEAQLK-AMDIQTVGDMNLKKNLYPLCFTPLSQESFLRTALGLP 365
Query: 137 GSTNTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXX 196
G + R RKSIS ERTFS T D +L + EI ML D++K
Sbjct: 366 GRPSESDPR-RKSISVERTFSPTSDFNILLEEHQEICRMLEEDVRKSGIVGGKTVTLKLK 424
Query: 197 -ASFEVRTRAVTLQKYISSSEDILKHASVLLKAELPVSLRLIGLRVTQ--FNEDKVRAPS 253
+SF+V TR++T + S EDI K + LL+ E +RL+G+R++Q F ED+ +
Sbjct: 425 LSSFDVLTRSLTPSDVVKSLEDIQKFSLELLEKEKGKEIRLLGVRLSQLIFEEDEKKR-- 482
Query: 254 DPTQKTLTNFMTSGHASKKIVGDQNSLGSD-INDDCLI 290
KT+T F KK+ QN GS+ ++DD +I
Sbjct: 483 ---SKTITEFWNE----KKLQ-IQNLQGSENVDDDDVI 512
Score = 43 (20.2 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 7/11 (63%), Positives = 11/11 (100%)
Query: 4 SLDEAYLDITE 14
SLDEA++D+T+
Sbjct: 178 SLDEAFIDLTD 188
>UNIPROTKB|E9PST3 [details] [associations]
symbol:Polk "Protein Polk" species:10116 "Rattus
norvegicus" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001126
InterPro:IPR006642 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 SMART:SM00734 RGD:620058
GO:GO:0003684 GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100
SUPFAM:SSF100879 IPI:IPI00777918 Ensembl:ENSRNOT00000061463
ArrayExpress:E9PST3 Uniprot:E9PST3
Length = 793
Score = 433 (157.5 bits), Expect = 6.0e-40, P = 6.0e-40
Identities = 138/386 (35%), Positives = 193/386 (50%)
Query: 1 MAASLDEAYLDITEVCRER-G---------IS-------GIEIAEELRTSVYEEAGLTCS 43
MA SLDEAYL+IT+ +ER G I GI + + T + L
Sbjct: 192 MAMSLDEAYLNITQHLQERQGWPEDKRRYFIKMGNCRKIGI-LTLAMTTGNFHLLRLAQP 250
Query: 44 AG-VAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVF 102
G +APN +LAKVCSD NKPNGQ+ + R AVM FI LPIRK+ GIGKVTE +L
Sbjct: 251 QGCIAPNTMLAKVCSDKNKPNGQYQIVPSRSAVMDFIKDLPIRKVSGIGKVTEKMLL-AL 309
Query: 103 GINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGSTNTPQARFRKSISSERTFSVTEDK 162
GI TC E+ Q+ +LL +FS S+ +FL V LGLGST+ + RKS+S ERTFS
Sbjct: 310 GIVTCTELYQQRALLSLLFSESSWHYFLHVALGLGSTDLARDGERKSMSVERTFSEINKT 369
Query: 163 ALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXASFEVRTRAVTLQKYISSSEDILKHA 222
Y E+ L+ D+QKE FEV+TRA T+ IS++EDI A
Sbjct: 370 EEQYSLCQELCTELAHDLQKEGLKGRTVTIKLKNVDFEVKTRASTVPSAISTAEDIFAVA 429
Query: 223 SVLLKAEL------PVSLRLIGLRVTQFNEDKVRAPSDPTQKTLTNFMTSGHASKKIVGD 276
LL+ E+ P+ LRL+G+R++ F+ D R Q+++ F+ +G+ G
Sbjct: 430 KELLRTEVTAGSPQPLRLRLMGVRMSTFSNDDDRKHQ---QRSIIGFLQAGNQGLSPTG- 485
Query: 277 QNSLGSDINDDCLIDDKETSVSLDVSETNNYE-FGDPVCDNSLPDLNDE-NCSFSNKISE 334
C D + + + ET+ + F D +P+ D C KI+
Sbjct: 486 -----------CTADRTDKTELVKPLETSRKKSFFDKKRSERIPNCQDPPRC----KIAG 530
Query: 335 VEKIHENEVSQLLEGNSLVLRQEEGS 360
+ + +E SQ L+ S + E S
Sbjct: 531 EQALQASEPSQALKKMSESFKTSENS 556
>UNIPROTKB|D6RAE5 [details] [associations]
symbol:POLK "DNA polymerase kappa" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0003684 GO:GO:0006281 EMBL:CH471084
EMBL:AC010245 EMBL:AC116341 GO:GO:0003887 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879
HOGENOM:HOG000082711 UniGene:Hs.732105 HGNC:HGNC:9183 EMBL:AC026424
IPI:IPI00966124 SMR:D6RAE5 Ensembl:ENST00000503479 Uniprot:D6RAE5
Length = 396
Score = 378 (138.1 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 82/165 (49%), Positives = 109/165 (66%)
Query: 20 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQF-VLPNDRMAVMTF 78
G S E+ +E+R + ++ LT SAG+APN +LAKVCSD NKPNGQ+ +LPN R AVM F
Sbjct: 221 GTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPN-RQAVMDF 279
Query: 79 ISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGS 138
I LPIRK+ GIGKVTE +L+ GI TC E+ Q+ +LL +FS ++ +FL + LGLGS
Sbjct: 280 IKDLPIRKVSGIGKVTEKMLK-ALGIITCTELYQQRALLSLLFSETSWHYFLHISLGLGS 338
Query: 139 TNTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKE 183
T+ + RKS+S ERTFS Y E+ L+ D+QKE
Sbjct: 339 THLTRDGERKSMSVERTFSEINKAEEQYSLCQELCSELAQDLQKE 383
Score = 59 (25.8 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 13/19 (68%), Positives = 15/19 (78%)
Query: 1 MAASLDEAYLDITEVCRER 19
MA SLDEAYL+IT+ ER
Sbjct: 127 MAMSLDEAYLNITKHLEER 145
>UNIPROTKB|Q5Q9G5 [details] [associations]
symbol:POLK "DNA polymerase kappa" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0003684 GO:GO:0006281 EMBL:AC010245
EMBL:AC116341 GO:GO:0003887 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 HOGENOM:HOG000082711
UniGene:Hs.732105 HGNC:HGNC:9183 EMBL:AC026424 EMBL:AY769932
IPI:IPI00967663 SMR:Q5Q9G5 STRING:Q5Q9G5 Ensembl:ENST00000504026
UCSC:uc003kee.3 HOVERGEN:HBG056846 Uniprot:Q5Q9G5
Length = 461
Score = 378 (138.1 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 82/165 (49%), Positives = 109/165 (66%)
Query: 20 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQF-VLPNDRMAVMTF 78
G S E+ +E+R + ++ LT SAG+APN +LAKVCSD NKPNGQ+ +LPN R AVM F
Sbjct: 287 GTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPN-RQAVMDF 345
Query: 79 ISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGS 138
I LPIRK+ GIGKVTE +L+ GI TC E+ Q+ +LL +FS ++ +FL + LGLGS
Sbjct: 346 IKDLPIRKVSGIGKVTEKMLK-ALGIITCTELYQQRALLSLLFSETSWHYFLHISLGLGS 404
Query: 139 TNTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKE 183
T+ + RKS+S ERTFS Y E+ L+ D+QKE
Sbjct: 405 THLTRDGERKSMSVERTFSEINKAEEQYSLCQELCSELAQDLQKE 449
Score = 59 (25.8 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 13/19 (68%), Positives = 15/19 (78%)
Query: 1 MAASLDEAYLDITEVCRER 19
MA SLDEAYL+IT+ ER
Sbjct: 193 MAMSLDEAYLNITKHLEER 211
>UNIPROTKB|Q5Q9G7 [details] [associations]
symbol:POLK "DNA polymerase kappa" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0003684 GO:GO:0006281 EMBL:AC010245
EMBL:AC116341 GO:GO:0003887 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 HOGENOM:HOG000082711
UniGene:Hs.732105 HGNC:HGNC:9183 EMBL:AC026424 HOVERGEN:HBG056846
EMBL:AY769930 IPI:IPI00965083 SMR:Q5Q9G7 STRING:Q5Q9G7
Ensembl:ENST00000509126 Uniprot:Q5Q9G7
Length = 489
Score = 378 (138.1 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 82/165 (49%), Positives = 109/165 (66%)
Query: 20 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQF-VLPNDRMAVMTF 78
G S E+ +E+R + ++ LT SAG+APN +LAKVCSD NKPNGQ+ +LPN R AVM F
Sbjct: 287 GTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPN-RQAVMDF 345
Query: 79 ISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGS 138
I LPIRK+ GIGKVTE +L+ GI TC E+ Q+ +LL +FS ++ +FL + LGLGS
Sbjct: 346 IKDLPIRKVSGIGKVTEKMLK-ALGIITCTELYQQRALLSLLFSETSWHYFLHISLGLGS 404
Query: 139 TNTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKE 183
T+ + RKS+S ERTFS Y E+ L+ D+QKE
Sbjct: 405 THLTRDGERKSMSVERTFSEINKAEEQYSLCQELCSELAQDLQKE 449
Score = 59 (25.8 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 13/19 (68%), Positives = 15/19 (78%)
Query: 1 MAASLDEAYLDITEVCRER 19
MA SLDEAYL+IT+ ER
Sbjct: 193 MAMSLDEAYLNITKHLEER 211
>ASPGD|ASPL0000039840 [details] [associations]
symbol:AN3373 species:162425 "Emericella nidulans"
[GO:0000077 "DNA damage checkpoint" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] HAMAP:MF_01113 InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0003684
GO:GO:0006281 EMBL:BN001306 GO:GO:0003887 Gene3D:3.30.1490.100
SUPFAM:SSF100879 OMA:VHVDCDA EnsemblFungi:CADANIAT00009669
HOGENOM:HOG000082709 Uniprot:C8VHQ1
Length = 612
Score = 394 (143.8 bits), Expect = 3.0e-36, P = 3.0e-36
Identities = 90/253 (35%), Positives = 137/253 (54%)
Query: 2 AASLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINK 61
+AS+DEAYL+IT CRE+ + E +R + E+ ++ SAG+A N +AK+CS+ NK
Sbjct: 205 SASIDEAYLNITAYCREKQLDPDEAVSRMRAEILEKTKISVSAGIAANAKIAKICSNRNK 264
Query: 62 PNGQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVF 121
PNGQF +PN++ A+M F+ LP+RKI G+G+V E L D GI TC ++ + + L +F
Sbjct: 265 PNGQFRVPNEKNAIMEFMRDLPMRKINGVGRVFEREL-DSIGIKTCGDIFPQRAYLAKLF 323
Query: 122 SHSTADFFLSVGLGLGSTNTPQARF--RKSISSERTFSVTEDKALLYRKLAEIAEMLSAD 179
F LG+G T A RKS+ +ERTF + KL A+ L D
Sbjct: 324 GEKALHFLAQCYLGVGRTKIQPAESYERKSVGTERTFHEISKREEFREKLWSCAQELEKD 383
Query: 180 MQKEXXXXXXXXXXXXXASFEVRTRAVTLQKYISSSEDILKHASVLLKA---ELP-VSLR 235
+ + A+FEV TR + +S+++D+ A +L+ E+P + LR
Sbjct: 384 LSRTQFMGRTLVLKVKLATFEVLTRQYQPARAVSTAKDLFTSALPMLEKLEKEIPNMKLR 443
Query: 236 LIGLRVTQFNEDK 248
L+G+R T K
Sbjct: 444 LLGIRCTNLVSTK 456
>UNIPROTKB|D6R9M8 [details] [associations]
symbol:POLK "DNA polymerase kappa" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001126
InterPro:IPR017963 Pfam:PF00817 PROSITE:PS50173 GO:GO:0003684
GO:GO:0006281 EMBL:AC010245 EMBL:AC116341 GO:GO:0003887
InterPro:IPR024728 Pfam:PF11798 HOGENOM:HOG000082711 HGNC:HGNC:9183
EMBL:AC026424 IPI:IPI00967979 ProteinModelPortal:D6R9M8 SMR:D6R9M8
Ensembl:ENST00000514141 UCSC:uc003kea.3 ArrayExpress:D6R9M8
Bgee:D6R9M8 Uniprot:D6R9M8
Length = 427
Score = 340 (124.7 bits), Expect = 1.9e-35, Sum P(2) = 1.9e-35
Identities = 72/136 (52%), Positives = 96/136 (70%)
Query: 20 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQF-VLPNDRMAVMTF 78
G S E+ +E+R + ++ LT SAG+APN +LAKVCSD NKPNGQ+ +LPN R AVM F
Sbjct: 287 GTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPN-RQAVMDF 345
Query: 79 ISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGS 138
I LPIRK+ GIGKVTE +L+ GI TC E+ Q+ +LL +FS ++ +FL + LGLGS
Sbjct: 346 IKDLPIRKVSGIGKVTEKMLK-ALGIITCTELYQQRALLSLLFSETSWHYFLHISLGLGS 404
Query: 139 TNTPQARFRKSISSER 154
T+ + RKS+S ER
Sbjct: 405 THLTRDGERKSMSVER 420
Score = 59 (25.8 bits), Expect = 1.9e-35, Sum P(2) = 1.9e-35
Identities = 13/19 (68%), Positives = 15/19 (78%)
Query: 1 MAASLDEAYLDITEVCRER 19
MA SLDEAYL+IT+ ER
Sbjct: 193 MAMSLDEAYLNITKHLEER 211
>POMBASE|SPCC553.07c [details] [associations]
symbol:kpa1 "DinB translesion DNA repair polymerase, pol
kappa" species:4896 "Schizosaccharomyces pombe" [GO:0000077 "DNA
damage checkpoint" evidence=IMP] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006281 "DNA repair" evidence=ISM]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0019985 "translesion synthesis" evidence=TAS] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 PomBase:SPCC553.07c
GO:GO:0005829 GO:GO:0007126 GO:GO:0000077 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0000790 GO:GO:0003887 GO:GO:0019985 eggNOG:COG0389
Gene3D:3.30.1490.100 SUPFAM:SSF100879 HSSP:Q9UHC5 KO:K03511
PIR:T41397 RefSeq:NP_587767.2 ProteinModelPortal:O74944
STRING:O74944 EnsemblFungi:SPCC553.07c.1 GeneID:2539547
KEGG:spo:SPCC553.07c OMA:VHVDCDA OrthoDB:EOG441TMM NextBio:20800707
Uniprot:O74944
Length = 547
Score = 345 (126.5 bits), Expect = 4.8e-31, P = 4.8e-31
Identities = 95/313 (30%), Positives = 161/313 (51%)
Query: 3 ASLDEAYLDITEVCRERGIS-GIE----IAEELRTSVYEEAGLTCSAGVAPNRLLAKVCS 57
AS+DE Y+++T R + ++ +E + E++R V+EE G+T S G+A N+LLAK+ S
Sbjct: 223 ASIDEFYMNLTSHLRLQELAFTVENITMVVEKIRKQVHEETGVTVSCGIAANKLLAKIAS 282
Query: 58 DINKPNGQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLL 117
+ KPN QF +P D + + F++ LP+R++ GIG+V E L + I TC ++ + +L
Sbjct: 283 NKRKPNNQFFIPFDEIGISKFMNDLPVREVSGIGRVLEQQLLGL-EIKTCGDIQRNLVIL 341
Query: 118 CAVFSHSTADFFLSVGLGLGSTNTPQ--ARFRKSISSERTFSVT-EDKALLYRKLAEIAE 174
+F + L G G+T + RK+I SE TFS +++ KL + +
Sbjct: 342 SYIFLPKSFQNLLRCSYGFGTTILDEYGESKRKTIGSEATFSSNLSSPSIIEYKLRLLVQ 401
Query: 175 MLSADMQKEXXXXXXXXXXXXXASFEVRTRAVTLQKYISSSEDILKHASVLLKAELPVSL 234
+S ++QK + F+V T+ ++ ++I S D+LK A LL+ P+++
Sbjct: 402 NVSENLQKRGLVTNSIAIKYKTSEFQVHTKQKSIGQFIHSESDLLKPALQLLRQSYPMTI 461
Query: 235 RLIGLRVTQFNEDKVRAPSDPTQKTLTNFMTSGHASKKIVGDQNSLGSDINDDCLIDDKE 294
RL+G+R T+ K R + + N + K I + L + D CL + E
Sbjct: 462 RLLGVRATKL-VSKSRCLAMQLKFQSQNTVPCPVCQKNIENELGILNQHV-DLCL--NVE 517
Query: 295 TSVSL-DVSETNN 306
T SL + T N
Sbjct: 518 TVKSLINTDHTAN 530
>UNIPROTKB|Q71Y46 [details] [associations]
symbol:dinB "DNA polymerase IV" species:265669 "Listeria
monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0046872 GO:GO:0003684
GO:GO:0006260 GO:GO:0006281 EMBL:AE017262 GenomeReviews:AE017262_GR
GO:GO:0003887 eggNOG:COG0389 HOGENOM:HOG000082707 KO:K02346
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 OMA:MNILNEY ProtClustDB:PRK02406
RefSeq:YP_014591.1 ProteinModelPortal:Q71Y46 STRING:Q71Y46
GeneID:2798339 KEGG:lmf:LMOf2365_1998 PATRIC:20325291
Uniprot:Q71Y46
Length = 356
Score = 266 (98.7 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 83/247 (33%), Positives = 126/247 (51%)
Query: 4 SLDEAYLDITEVCRERGI-SGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKP 62
SLDEAYLD+TE ++G+ S +A E++ ++Y+E GLT SAGV+ N+ +AK+ SD KP
Sbjct: 104 SLDEAYLDVTE--NKKGMKSATMVAREIQQTIYQELGLTASAGVSFNKFIAKIASDFKKP 161
Query: 63 NG-QFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGS---LLC 118
G V P + A F+ +P+ K G+GKVT L + GI T + L+K S L+
Sbjct: 162 AGITVVTPEEAEA---FLEQIPVTKFYGVGKVTAEKLHRL-GIETGAD-LKKWSEWDLIR 216
Query: 119 AVFSHSTADFFLSVGLGLGSTNTPQARFRKSISSERTFSVTE-DKALLYRKLAEIAEMLS 177
+ H + G N P R RKS+ E TF D +L + L + A+ +
Sbjct: 217 ELHKHGYHLYRHVRGRSNNIVN-PH-RDRKSVGKETTFEFNVLDSRVLEQSLMQFAKKVE 274
Query: 178 ADMQKEXXXXXXXXXXXXXASFEVRTRAVTLQKYISSSEDILKHASVLLKAELPV--SLR 235
+ K + F T+ +TL +Y + + I + A++LL+ S+R
Sbjct: 275 ERLIKLQKHGKTVVLKLRYSDFTTITKRLTLNEYTNDTSQIYQAAALLLRESYTGQDSIR 334
Query: 236 LIGLRVT 242
LIGL VT
Sbjct: 335 LIGLTVT 341
>UNIPROTKB|Q83EN5 [details] [associations]
symbol:dinP "DNA polymerase IV" species:227377 "Coxiella
burnetii RSA 493" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005737 GO:GO:0000287 GO:GO:0003684 GO:GO:0006281
GO:GO:0006261 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003887
HOGENOM:HOG000082707 KO:K02346 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 OMA:MNILNEY
RefSeq:NP_819324.2 GeneID:1208161 KEGG:cbu:CBU_0280 PATRIC:17929253
ProtClustDB:CLSK913950 BioCyc:CBUR227377:GJ7S-285-MONOMER
Uniprot:Q83EN5
Length = 372
Score = 270 (100.1 bits), Expect = 3.3e-22, P = 3.3e-22
Identities = 85/251 (33%), Positives = 131/251 (52%)
Query: 4 SLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPN 63
SLDEAYLD+++ C+ S IA+E+R + + LT SAGVA N+LLAKV S NKPN
Sbjct: 124 SLDEAYLDVSD-CKIHQGSATRIAQEIREQIVKRHSLTASAGVASNKLLAKVASAWNKPN 182
Query: 64 G-QFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEM--LQKGSLLCAV 120
G + +LP+ F+ +LPI KI G+GK+T ++ I+TC ++ L + +L +
Sbjct: 183 GIKVILPSK---ADDFVKTLPIEKIHGVGKITAQKMK-AMNIHTCSDLQALSREALSKSF 238
Query: 121 FSHSTADFFLSVGLGLGSTNTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADM 180
S + L G+ S P R RKS+S E TFS +D A L E+A + + D+
Sbjct: 239 GSFGVTLYELCRGIDPRSVE-PN-RIRKSVSVEHTFS--QDIATLSECEIELANLFN-DL 293
Query: 181 QKEXXXXXXXXXXXXXASFEVRTRAVTLQKYISS--SEDILKHA--SVLLKAELPVSLRL 236
++ + +T + I+ S D+ KH + + + PV RL
Sbjct: 294 KQRLLKHTDRCIRKQFVKIKFNDFKITKAETITQTISLDLFKHLLYQIFERQQKPV--RL 351
Query: 237 IGLRVTQFNED 247
+G+ V+ F+ED
Sbjct: 352 LGVGVS-FSED 361
>TIGR_CMR|CBU_0280 [details] [associations]
symbol:CBU_0280 "DNA-damage-inducible protein P"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0000287 GO:GO:0003684
GO:GO:0006281 GO:GO:0006261 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0003887 HOGENOM:HOG000082707 KO:K02346 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 OMA:MNILNEY
RefSeq:NP_819324.2 GeneID:1208161 KEGG:cbu:CBU_0280 PATRIC:17929253
ProtClustDB:CLSK913950 BioCyc:CBUR227377:GJ7S-285-MONOMER
Uniprot:Q83EN5
Length = 372
Score = 270 (100.1 bits), Expect = 3.3e-22, P = 3.3e-22
Identities = 85/251 (33%), Positives = 131/251 (52%)
Query: 4 SLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPN 63
SLDEAYLD+++ C+ S IA+E+R + + LT SAGVA N+LLAKV S NKPN
Sbjct: 124 SLDEAYLDVSD-CKIHQGSATRIAQEIREQIVKRHSLTASAGVASNKLLAKVASAWNKPN 182
Query: 64 G-QFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEM--LQKGSLLCAV 120
G + +LP+ F+ +LPI KI G+GK+T ++ I+TC ++ L + +L +
Sbjct: 183 GIKVILPSK---ADDFVKTLPIEKIHGVGKITAQKMK-AMNIHTCSDLQALSREALSKSF 238
Query: 121 FSHSTADFFLSVGLGLGSTNTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADM 180
S + L G+ S P R RKS+S E TFS +D A L E+A + + D+
Sbjct: 239 GSFGVTLYELCRGIDPRSVE-PN-RIRKSVSVEHTFS--QDIATLSECEIELANLFN-DL 293
Query: 181 QKEXXXXXXXXXXXXXASFEVRTRAVTLQKYISS--SEDILKHA--SVLLKAELPVSLRL 236
++ + +T + I+ S D+ KH + + + PV RL
Sbjct: 294 KQRLLKHTDRCIRKQFVKIKFNDFKITKAETITQTISLDLFKHLLYQIFERQQKPV--RL 351
Query: 237 IGLRVTQFNED 247
+G+ V+ F+ED
Sbjct: 352 LGVGVS-FSED 361
>UNIPROTKB|Q8EHU9 [details] [associations]
symbol:dinB "DNA polymerase IV" species:211586 "Shewanella
oneidensis MR-1" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005737 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0006281 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003887
eggNOG:COG0389 HOGENOM:HOG000082707 KO:K02346 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 OMA:MNILNEY
ProtClustDB:PRK02406 RefSeq:NP_716739.1 HSSP:Q9UHC5
ProteinModelPortal:Q8EHU9 GeneID:1168948 KEGG:son:SO_1114
PATRIC:23521872 Uniprot:Q8EHU9
Length = 357
Score = 261 (96.9 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 66/156 (42%), Positives = 91/156 (58%)
Query: 4 SLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPN 63
SLDEAYLD+++ +G S IAE +R + E GLT SAGVAP + LAKV SD+NKPN
Sbjct: 101 SLDEAYLDVSDCKLHKG-SATLIAEAIRRDILAETGLTASAGVAPVKFLAKVASDLNKPN 159
Query: 64 GQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEM--LQKGSLLCAVF 121
GQ+V+P D+ V FI +L +R+I G+GKVT L + G+NTC ++ K L+ F
Sbjct: 160 GQYVIPPDK--VPEFIRTLSLRQIPGVGKVTAEKLSSL-GLNTCGDVQTYPKQELITR-F 215
Query: 122 SHSTADFFLSVGLGLGSTNTPQARFRKSISSERTFS 157
A + G+ +R RKS+ E T +
Sbjct: 216 GKFGA-VLIERAQGIDDRGLSVSRERKSVGVETTLA 250
>TIGR_CMR|SO_1114 [details] [associations]
symbol:SO_1114 "DNA-damage-inducible protein P"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0046872 GO:GO:0003684
GO:GO:0006260 GO:GO:0006281 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0003887 eggNOG:COG0389 HOGENOM:HOG000082707 KO:K02346
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 OMA:MNILNEY ProtClustDB:PRK02406
RefSeq:NP_716739.1 HSSP:Q9UHC5 ProteinModelPortal:Q8EHU9
GeneID:1168948 KEGG:son:SO_1114 PATRIC:23521872 Uniprot:Q8EHU9
Length = 357
Score = 261 (96.9 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 66/156 (42%), Positives = 91/156 (58%)
Query: 4 SLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPN 63
SLDEAYLD+++ +G S IAE +R + E GLT SAGVAP + LAKV SD+NKPN
Sbjct: 101 SLDEAYLDVSDCKLHKG-SATLIAEAIRRDILAETGLTASAGVAPVKFLAKVASDLNKPN 159
Query: 64 GQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEM--LQKGSLLCAVF 121
GQ+V+P D+ V FI +L +R+I G+GKVT L + G+NTC ++ K L+ F
Sbjct: 160 GQYVIPPDK--VPEFIRTLSLRQIPGVGKVTAEKLSSL-GLNTCGDVQTYPKQELITR-F 215
Query: 122 SHSTADFFLSVGLGLGSTNTPQARFRKSISSERTFS 157
A + G+ +R RKS+ E T +
Sbjct: 216 GKFGA-VLIERAQGIDDRGLSVSRERKSVGVETTLA 250
>UNIPROTKB|Q47155 [details] [associations]
symbol:dinB species:83333 "Escherichia coli K-12"
[GO:0006974 "response to DNA damage stimulus" evidence=IEP]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;IDA] [GO:0000731 "DNA synthesis involved in DNA
repair" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0019985
"translesion synthesis" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0009432 "SOS response"
evidence=IEP;IDA] HAMAP:MF_01113 InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0005737 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 EMBL:U70214 GO:GO:0000731
GO:GO:0009432 GO:GO:0003887 EMBL:D38582 GO:GO:0019985 PDB:1OK7
PDB:1UNN PDBsum:1OK7 PDBsum:1UNN KO:K02346 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 EMBL:AF483080
EMBL:AF483081 EMBL:AF483082 EMBL:AF483083 EMBL:AF483084
EMBL:AF483085 EMBL:AF483086 EMBL:AF483087 EMBL:AF483088
EMBL:AF483089 EMBL:AF483090 EMBL:AF483091 EMBL:AF483092
EMBL:AF483093 EMBL:AF483094 EMBL:AF483095 EMBL:AF483096
EMBL:AF483097 EMBL:AF483098 EMBL:AF483099 EMBL:AF483100
EMBL:AF483101 EMBL:AF483102 EMBL:AF483103 EMBL:AF483104
EMBL:AF483105 PIR:H64747 RefSeq:NP_414766.1 RefSeq:YP_488526.1
ProteinModelPortal:Q47155 SMR:Q47155 IntAct:Q47155
EnsemblBacteria:EBESCT00000002588 EnsemblBacteria:EBESCT00000014477
GeneID:12932684 GeneID:944922 KEGG:ecj:Y75_p0222 KEGG:eco:b0231
PATRIC:32115577 EchoBASE:EB2935 EcoGene:EG13141 OMA:MNILNEY
ProtClustDB:PRK02406 BioCyc:EcoCyc:G6115-MONOMER
BioCyc:ECOL316407:JW0221-MONOMER BioCyc:MetaCyc:G6115-MONOMER
EvolutionaryTrace:Q47155 Genevestigator:Q47155 Uniprot:Q47155
Length = 351
Score = 257 (95.5 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 69/181 (38%), Positives = 102/181 (56%)
Query: 4 SLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPN 63
SLDEAYLD+T+ G S IA+E+R +++ E LT SAGVAP + LAK+ SD+NKPN
Sbjct: 101 SLDEAYLDVTDSVHCHG-SATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPN 159
Query: 64 GQFVL-PNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFS 122
GQFV+ P + V F+ +LP+ KI G+GKV+ L + G+ TC ++ QK L+ +
Sbjct: 160 GQFVITPAE---VPAFLQTLPLAKIPGVGKVSAAKL-EAMGLRTCGDV-QKCDLVMLLKR 214
Query: 123 HSTADFFL-SVGLGLGSTNTPQARFRKSISSERTFSV-----TEDKALLYRKLAEIAEML 176
L G+ + R RKS+ ERT + +E +A++ R E+ L
Sbjct: 215 FGKFGRILWERSQGIDERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERRL 274
Query: 177 S 177
+
Sbjct: 275 A 275
>UNIPROTKB|Q74CQ6 [details] [associations]
symbol:dinB "DNA polymerase IV" species:243231 "Geobacter
sulfurreducens PCA" [GO:0003674 "molecular_function" evidence=ND]
HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0000287 GO:GO:0003684
GO:GO:0006281 GO:GO:0006261 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0003887 KO:K02346 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 HOGENOM:HOG000082710
InterPro:IPR025188 Pfam:PF13438 HSSP:Q97W02 RefSeq:NP_952667.1
ProteinModelPortal:Q74CQ6 GeneID:2687433 KEGG:gsu:GSU1616
PATRIC:22026081 OMA:FETHTRA ProtClustDB:CLSK827609
BioCyc:GSUL243231:GH27-1576-MONOMER Uniprot:Q74CQ6
Length = 409
Score = 267 (99.0 bits), Expect = 5.6e-21, P = 5.6e-21
Identities = 75/263 (28%), Positives = 130/263 (49%)
Query: 4 SLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPN 63
S+DEA+LD+T R G + + IA E++ + + GLTCS G+APN+LLAK+ SD+ KP+
Sbjct: 103 SIDEAFLDLTGSLRLFGRADV-IAREIKARIRDRFGLTCSIGIAPNKLLAKLASDMQKPD 161
Query: 64 GQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSH 123
G ++P + +A + + + PIR + GIG TE L+ GI+TC ++ S +
Sbjct: 162 GLTIIPPENVA--SLMKTTPIRSLCGIGPSTEQRLK-YLGISTCNDLGHFSSKILTRHFG 218
Query: 124 STADFFLSVGLGLGSTN---TPQARFRKSISSERTFSVT-EDKALLYRKLAEIAEMLSAD 179
+ +G G+ + T KS+S T +K +++ L ++EM+
Sbjct: 219 AMGARLKQMGQGIDDSPVIPTTTEEEVKSVSHSTTLDHDLTNKDDIHKYLLMLSEMVGRR 278
Query: 180 MQKEXXXXXXXXXXXXXASFEVRTRAVTLQKYISSSEDILKHASVLLKA-ELPVSLRLIG 238
++ A F +R TL ++ S DI + + LL +L +RL+G
Sbjct: 279 ARRYKTKGKTVTLTIRYADFTTFSRQETLPSPLNRSGDIYRAVTALLDTLQLTQPIRLLG 338
Query: 239 LRVTQFNEDKVRAPSDPTQKTLT 261
+ ++ + P P ++ LT
Sbjct: 339 VAISNLVHASEQLPLFPEERRLT 361
>TIGR_CMR|GSU_1616 [details] [associations]
symbol:GSU_1616 "ImpB/MucB/SamB family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0009650 "UV protection"
evidence=ISS] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0000287 GO:GO:0003684
GO:GO:0006281 GO:GO:0006261 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0003887 KO:K02346 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 HOGENOM:HOG000082710
InterPro:IPR025188 Pfam:PF13438 HSSP:Q97W02 RefSeq:NP_952667.1
ProteinModelPortal:Q74CQ6 GeneID:2687433 KEGG:gsu:GSU1616
PATRIC:22026081 OMA:FETHTRA ProtClustDB:CLSK827609
BioCyc:GSUL243231:GH27-1576-MONOMER Uniprot:Q74CQ6
Length = 409
Score = 267 (99.0 bits), Expect = 5.6e-21, P = 5.6e-21
Identities = 75/263 (28%), Positives = 130/263 (49%)
Query: 4 SLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPN 63
S+DEA+LD+T R G + + IA E++ + + GLTCS G+APN+LLAK+ SD+ KP+
Sbjct: 103 SIDEAFLDLTGSLRLFGRADV-IAREIKARIRDRFGLTCSIGIAPNKLLAKLASDMQKPD 161
Query: 64 GQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSH 123
G ++P + +A + + + PIR + GIG TE L+ GI+TC ++ S +
Sbjct: 162 GLTIIPPENVA--SLMKTTPIRSLCGIGPSTEQRLK-YLGISTCNDLGHFSSKILTRHFG 218
Query: 124 STADFFLSVGLGLGSTN---TPQARFRKSISSERTFSVT-EDKALLYRKLAEIAEMLSAD 179
+ +G G+ + T KS+S T +K +++ L ++EM+
Sbjct: 219 AMGARLKQMGQGIDDSPVIPTTTEEEVKSVSHSTTLDHDLTNKDDIHKYLLMLSEMVGRR 278
Query: 180 MQKEXXXXXXXXXXXXXASFEVRTRAVTLQKYISSSEDILKHASVLLKA-ELPVSLRLIG 238
++ A F +R TL ++ S DI + + LL +L +RL+G
Sbjct: 279 ARRYKTKGKTVTLTIRYADFTTFSRQETLPSPLNRSGDIYRAVTALLDTLQLTQPIRLLG 338
Query: 239 LRVTQFNEDKVRAPSDPTQKTLT 261
+ ++ + P P ++ LT
Sbjct: 339 VAISNLVHASEQLPLFPEERRLT 361
>TIGR_CMR|CPS_1040 [details] [associations]
symbol:CPS_1040 "DNA polymerase IV" species:167879
"Colwellia psychrerythraea 34H" [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR003583
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 SMART:SM00278
GO:GO:0005737 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0006281 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003887
eggNOG:COG0389 HOGENOM:HOG000082707 KO:K02346 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 RefSeq:YP_267789.1
HSSP:Q9UNA4 ProteinModelPortal:Q487H6 STRING:Q487H6 GeneID:3521759
KEGG:cps:CPS_1040 PATRIC:21465357 OMA:QSLGMRT
BioCyc:CPSY167879:GI48-1126-MONOMER Uniprot:Q487H6
Length = 352
Score = 240 (89.5 bits), Expect = 7.3e-19, Sum P(2) = 7.3e-19
Identities = 64/167 (38%), Positives = 93/167 (55%)
Query: 4 SLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPN 63
SLDEAYLD+T+ +G S IAE +R ++ E LT SAG+APN+ LAK+ SD NKPN
Sbjct: 103 SLDEAYLDVTDATMCQG-SATLIAERIRADIFNELNLTASAGIAPNKFLAKIASDENKPN 161
Query: 64 GQFVLPNDRMAVMTFISSLPIRKIGGIG-KVTEHILRDVFGINTCEEMLQKG-SLLCAVF 121
GQ V+ D++A F+ L ++KI GIG K E + R G TC ++ Q L +
Sbjct: 162 GQCVITPDKVA--NFVEQLSLKKIPGIGPKTFEKLNRH--GYVTCADVRQSNIRALQNIV 217
Query: 122 SHSTADFFLSVGLGLGSTNTPQARFRKSISSERTFS---VTEDKALL 165
+L G+ + + +R RKS++ E T + T+D+ L
Sbjct: 218 GKFANSLYLK-SHGVDNRDLEVSRQRKSLAIETTLAHDISTQDECKL 263
Score = 39 (18.8 bits), Expect = 7.3e-19, Sum P(2) = 7.3e-19
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 237 IGLRVTQFNEDKVRAPSDPTQKTL 260
+ L+ T FN+ V S+ Q+ L
Sbjct: 289 VKLKFTDFNQTTVETQSNECQQAL 312
>UNIPROTKB|Q3ZAI3 [details] [associations]
symbol:dinB "DNA polymerase IV" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=ISS] [GO:0006281 "DNA repair"
evidence=ISS] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0046872 GO:GO:0003684
GO:GO:0006260 GO:GO:0006281 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0003887 eggNOG:COG0389 HOGENOM:HOG000082707 KO:K02346
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 HSSP:P96022 RefSeq:YP_180766.1
ProteinModelPortal:Q3ZAI3 STRING:Q3ZAI3 GeneID:3229123
KEGG:det:DET0011 PATRIC:21607125 OMA:PDGITIL ProtClustDB:CLSK836830
BioCyc:DETH243164:GJNF-11-MONOMER Uniprot:Q3ZAI3
Length = 390
Score = 243 (90.6 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 74/260 (28%), Positives = 124/260 (47%)
Query: 5 LDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNG 64
LDEAYL++T G G E+A ++R + E + S G+A ++++AK+ ++ KPNG
Sbjct: 104 LDEAYLEVTGFESLHGSIG-EMALKIRRRITAELSINASIGIANSKVVAKIATERAKPNG 162
Query: 65 QFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHS 124
Q +P A F++ L I + GIGK TE+ L+ + GINT + + + +
Sbjct: 163 QCEVPAGEEAA--FLAPLDISIMPGIGKKTEYHLKSL-GINTLGRLAGIPATFLKIHLGT 219
Query: 125 TADFFLSVGLGLGSTNTPQARFRKSISSERTFSV-TEDKALLYRKLAEIAEMLSADMQKE 183
A + L+ G+ + KSIS E TF T + L KL ++E ++A ++K
Sbjct: 220 YAPYLLNAAAGIDNRPVEMPAEAKSISRETTFETDTRNHTFLEAKLGYLSEKIAATLRKR 279
Query: 184 XXXXXXXXXXXXXASFEVRTRAVTLQKYISSSEDILKHASVLLKAELPV---SLRLIGLR 240
A F TR L S +++I + A L+ L S+RL+G+
Sbjct: 280 GKQARVVQIKIRFADFTTLTRQKHLNHPCSGNQEIFQTALKLMNGILDSDRRSVRLLGVG 339
Query: 241 VTQFNEDKVRAPSDPTQKTL 260
++ F + + DP + L
Sbjct: 340 ISDFCGPEKQLEIDPARARL 359
>TIGR_CMR|DET_0011 [details] [associations]
symbol:DET_0011 "DNA polymerase IV, putative"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003887
"DNA-directed DNA polymerase activity" evidence=ISS] [GO:0006281
"DNA repair" evidence=ISS] HAMAP:MF_01113 InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0005737
GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 GO:GO:0006281
EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0003887
eggNOG:COG0389 HOGENOM:HOG000082707 KO:K02346 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 HSSP:P96022
RefSeq:YP_180766.1 ProteinModelPortal:Q3ZAI3 STRING:Q3ZAI3
GeneID:3229123 KEGG:det:DET0011 PATRIC:21607125 OMA:PDGITIL
ProtClustDB:CLSK836830 BioCyc:DETH243164:GJNF-11-MONOMER
Uniprot:Q3ZAI3
Length = 390
Score = 243 (90.6 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 74/260 (28%), Positives = 124/260 (47%)
Query: 5 LDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNG 64
LDEAYL++T G G E+A ++R + E + S G+A ++++AK+ ++ KPNG
Sbjct: 104 LDEAYLEVTGFESLHGSIG-EMALKIRRRITAELSINASIGIANSKVVAKIATERAKPNG 162
Query: 65 QFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHS 124
Q +P A F++ L I + GIGK TE+ L+ + GINT + + + +
Sbjct: 163 QCEVPAGEEAA--FLAPLDISIMPGIGKKTEYHLKSL-GINTLGRLAGIPATFLKIHLGT 219
Query: 125 TADFFLSVGLGLGSTNTPQARFRKSISSERTFSV-TEDKALLYRKLAEIAEMLSADMQKE 183
A + L+ G+ + KSIS E TF T + L KL ++E ++A ++K
Sbjct: 220 YAPYLLNAAAGIDNRPVEMPAEAKSISRETTFETDTRNHTFLEAKLGYLSEKIAATLRKR 279
Query: 184 XXXXXXXXXXXXXASFEVRTRAVTLQKYISSSEDILKHASVLLKAELPV---SLRLIGLR 240
A F TR L S +++I + A L+ L S+RL+G+
Sbjct: 280 GKQARVVQIKIRFADFTTLTRQKHLNHPCSGNQEIFQTALKLMNGILDSDRRSVRLLGVG 339
Query: 241 VTQFNEDKVRAPSDPTQKTL 260
++ F + + DP + L
Sbjct: 340 ISDFCGPEKQLEIDPARARL 359
>UNIPROTKB|Q9KPS5 [details] [associations]
symbol:dinB "DNA polymerase IV" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_01113 InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0005737
GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0003887
eggNOG:COG0389 KO:K02346 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 OMA:QSLGMRT ProtClustDB:PRK02406
PIR:G82093 RefSeq:NP_231918.1 ProteinModelPortal:Q9KPS5
DNASU:2613209 GeneID:2613209 KEGG:vch:VC2287 PATRIC:20083613
Uniprot:Q9KPS5
Length = 360
Score = 220 (82.5 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 59/155 (38%), Positives = 84/155 (54%)
Query: 4 SLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPN 63
SLDEAYLD++E +G S IA+ +R +++E LT SAGVAP + LAKV SD+NKP+
Sbjct: 105 SLDEAYLDVSESTAYQG-SATLIAQAIRRDIWQELNLTASAGVAPIKFLAKVASDLNKPD 163
Query: 64 GQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKG-SLLCAVFS 122
G +V+ D++ M + SLP+ KI G+GKV L G+ ++ + L F
Sbjct: 164 GLYVVTPDKVQEM--VDSLPLEKIPGVGKVALEKLHQA-GLYVGADVRRADYRKLLHQFG 220
Query: 123 HSTADFFLSVGLGLGSTNTPQARFRKSISSERTFS 157
A + G+ R RKS+ E TFS
Sbjct: 221 RLGASLWKK-SHGIDEREVVTERERKSVGVEYTFS 254
>TIGR_CMR|VC_2287 [details] [associations]
symbol:VC_2287 "DNA-damage-inducible protein P" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0046872 GO:GO:0003684
GO:GO:0006260 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281
GO:GO:0003887 eggNOG:COG0389 KO:K02346 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 OMA:QSLGMRT
ProtClustDB:PRK02406 PIR:G82093 RefSeq:NP_231918.1
ProteinModelPortal:Q9KPS5 DNASU:2613209 GeneID:2613209
KEGG:vch:VC2287 PATRIC:20083613 Uniprot:Q9KPS5
Length = 360
Score = 220 (82.5 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 59/155 (38%), Positives = 84/155 (54%)
Query: 4 SLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPN 63
SLDEAYLD++E +G S IA+ +R +++E LT SAGVAP + LAKV SD+NKP+
Sbjct: 105 SLDEAYLDVSESTAYQG-SATLIAQAIRRDIWQELNLTASAGVAPIKFLAKVASDLNKPD 163
Query: 64 GQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKG-SLLCAVFS 122
G +V+ D++ M + SLP+ KI G+GKV L G+ ++ + L F
Sbjct: 164 GLYVVTPDKVQEM--VDSLPLEKIPGVGKVALEKLHQA-GLYVGADVRRADYRKLLHQFG 220
Query: 123 HSTADFFLSVGLGLGSTNTPQARFRKSISSERTFS 157
A + G+ R RKS+ E TFS
Sbjct: 221 RLGASLWKK-SHGIDEREVVTERERKSVGVEYTFS 254
>UNIPROTKB|Q81M86 [details] [associations]
symbol:dinB "DNA polymerase IV" species:1392 "Bacillus
anthracis" [GO:0003674 "molecular_function" evidence=ND]
HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0046872 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003684
GO:GO:0006260 GO:GO:0006281 GO:GO:0003887 eggNOG:COG0389 KO:K02346
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 RefSeq:NP_846596.1 RefSeq:YP_021011.1
RefSeq:YP_030301.1 ProteinModelPortal:Q81M86
EnsemblBacteria:EBBACT00000012953 EnsemblBacteria:EBBACT00000016454
EnsemblBacteria:EBBACT00000021276 GeneID:1087598 GeneID:2818956
GeneID:2848139 KEGG:ban:BA_4366 KEGG:bar:GBAA_4366 KEGG:bat:BAS4051
HOGENOM:HOG000082710 OMA:GDQIRRI ProtClustDB:PRK01810
BioCyc:BANT260799:GJAJ-4108-MONOMER
BioCyc:BANT261594:GJ7F-4248-MONOMER InterPro:IPR025188 Pfam:PF13438
Uniprot:Q81M86
Length = 412
Score = 222 (83.2 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 80/246 (32%), Positives = 117/246 (47%)
Query: 4 SLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPN 63
S+DE YLDIT+ C G S +EIA+ ++ ++ E L CS G+APN LAK SD+ KP
Sbjct: 110 SIDEGYLDITD-CYALG-SPLEIAKMIQQALLTELQLPCSIGIAPNLFLAKTASDMKKPL 167
Query: 64 GQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGS--LLCAVF 121
G VL + M I LP+ + GIG+ T L D+ I T E+ L KG+ ++ A
Sbjct: 168 GITVLRKRDIPEM--IWPLPVGAMHGIGEKTAEKLNDIH-IQTIEQ-LAKGNEHIIRAKI 223
Query: 122 SHSTADFFLSV-GLGLGSTNTPQARFRKSISSERTFS--VTEDKALLYRKLAEIAEMLSA 178
D G+ + Q KS+ + TFS + E+K LL L +++ +S
Sbjct: 224 GKHGVDLQRRAKGMDDREVDPSQMGQHKSVGNSMTFSKDMDEEKELL-DMLQRLSKSVSK 282
Query: 179 DMQKEXXXXXXXXXXXXXASFEVRTRAVTLQKYISSSEDILKHASVLLKAELPV-SLRLI 237
+QK TR+ L+ I DI + AS L K S+RL+
Sbjct: 283 RLQKRTLVSYNIQIMIKYHDRRTVTRSKQLKNAIWEERDIFQAASRLWKQHWDGDSVRLL 342
Query: 238 GLRVTQ 243
G+ T+
Sbjct: 343 GVTATE 348
>TIGR_CMR|BA_4366 [details] [associations]
symbol:BA_4366 "DNA-damage-inducible protein P, putative"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0009650 "UV protection"
evidence=ISS] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0046872 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003684
GO:GO:0006260 GO:GO:0006281 GO:GO:0003887 eggNOG:COG0389 KO:K02346
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 RefSeq:NP_846596.1 RefSeq:YP_021011.1
RefSeq:YP_030301.1 ProteinModelPortal:Q81M86
EnsemblBacteria:EBBACT00000012953 EnsemblBacteria:EBBACT00000016454
EnsemblBacteria:EBBACT00000021276 GeneID:1087598 GeneID:2818956
GeneID:2848139 KEGG:ban:BA_4366 KEGG:bar:GBAA_4366 KEGG:bat:BAS4051
HOGENOM:HOG000082710 OMA:GDQIRRI ProtClustDB:PRK01810
BioCyc:BANT260799:GJAJ-4108-MONOMER
BioCyc:BANT261594:GJ7F-4248-MONOMER InterPro:IPR025188 Pfam:PF13438
Uniprot:Q81M86
Length = 412
Score = 222 (83.2 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 80/246 (32%), Positives = 117/246 (47%)
Query: 4 SLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPN 63
S+DE YLDIT+ C G S +EIA+ ++ ++ E L CS G+APN LAK SD+ KP
Sbjct: 110 SIDEGYLDITD-CYALG-SPLEIAKMIQQALLTELQLPCSIGIAPNLFLAKTASDMKKPL 167
Query: 64 GQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGS--LLCAVF 121
G VL + M I LP+ + GIG+ T L D+ I T E+ L KG+ ++ A
Sbjct: 168 GITVLRKRDIPEM--IWPLPVGAMHGIGEKTAEKLNDIH-IQTIEQ-LAKGNEHIIRAKI 223
Query: 122 SHSTADFFLSV-GLGLGSTNTPQARFRKSISSERTFS--VTEDKALLYRKLAEIAEMLSA 178
D G+ + Q KS+ + TFS + E+K LL L +++ +S
Sbjct: 224 GKHGVDLQRRAKGMDDREVDPSQMGQHKSVGNSMTFSKDMDEEKELL-DMLQRLSKSVSK 282
Query: 179 DMQKEXXXXXXXXXXXXXASFEVRTRAVTLQKYISSSEDILKHASVLLKAELPV-SLRLI 237
+QK TR+ L+ I DI + AS L K S+RL+
Sbjct: 283 RLQKRTLVSYNIQIMIKYHDRRTVTRSKQLKNAIWEERDIFQAASRLWKQHWDGDSVRLL 342
Query: 238 GLRVTQ 243
G+ T+
Sbjct: 343 GVTATE 348
>TIGR_CMR|CHY_1651 [details] [associations]
symbol:CHY_1651 "DNA polymerase IV - AMBIGUITY"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] HAMAP:MF_01113 InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0005737
GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003684
GO:GO:0006260 GO:GO:0006281 GO:GO:0003887 eggNOG:COG0389 KO:K02346
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 HOGENOM:HOG000082710 RefSeq:YP_360472.1
HSSP:P96022 ProteinModelPortal:Q3ABL2 STRING:Q3ABL2 GeneID:3726655
KEGG:chy:CHY_1651 PATRIC:21276423 OMA:GNREIFQ
ProtClustDB:CLSK2464724 BioCyc:CHYD246194:GJCN-1650-MONOMER
Uniprot:Q3ABL2
Length = 391
Score = 219 (82.2 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 73/246 (29%), Positives = 118/246 (47%)
Query: 4 SLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPN 63
SLDEAYLD+T + G G EI ++++ ++EE LT S GVAPN+ LAK+ S++NKP+
Sbjct: 103 SLDEAYLDVTGSQKLFG-PGAEIGKKIKKRIFEETELTASVGVAPNKFLAKLASEVNKPD 161
Query: 64 GQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSL-LCAVFS 122
G + D V+ F++ LP+ + G+G+ + L D+ GI T ++ + L F
Sbjct: 162 GFCEVREDN--VLDFLAPLPVEMLWGVGEKMKERLNDM-GIKTVQDFWELPEFFLRKKFG 218
Query: 123 HSTAD-FFLSVGLGLGSTNTPQARFRKSISSERTFSV-TEDKALLYRKLAEIAEMLSADM 180
+ ++LS G+ P+ R KS+ E T + D L KL + + +
Sbjct: 219 VLGQNLYYLSRGIDFREV-IPE-RVPKSLGKEITLQKDSSDVDYLLGKLLGLTMAVGRGL 276
Query: 181 QKEXXXXXXXXXXXXXASFEVRTRAVTLQKYISSSEDILKHASVLL----KAELPVSLRL 236
++E +SF TR + + + + A L ELPV RL
Sbjct: 277 RREGFYAGGISVKIRLSSFITYTRHSRFFEPTWMDDVLYREAKRLFLENYHGELPV--RL 334
Query: 237 IGLRVT 242
+G+ T
Sbjct: 335 VGVTAT 340
>UNIPROTKB|Q74H50 [details] [associations]
symbol:dinB "DNA polymerase IV" species:243231 "Geobacter
sulfurreducens PCA" [GO:0003674 "molecular_function" evidence=ND]
HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0000287 GO:GO:0003684
GO:GO:0006281 GO:GO:0006261 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0003887 KO:K02346 Gene3D:3.30.1490.100 SUPFAM:SSF100879
HOGENOM:HOG000082710 HSSP:P96022 ProtClustDB:CLSK827609
RefSeq:NP_951105.1 ProteinModelPortal:Q74H50 GeneID:2688550
KEGG:gsu:GSU0043 PATRIC:22022827 OMA:ANRIILH
BioCyc:GSUL243231:GH27-86-MONOMER Uniprot:Q74H50
Length = 413
Score = 214 (80.4 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 76/257 (29%), Positives = 123/257 (47%)
Query: 4 SLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPN 63
S+DEA+LD+T G S IA ++ + GLTCS G+APN+LLAK+ SD+ KP+
Sbjct: 106 SIDEAFLDVTGSLALFG-SAETIACRIKALIRHRFGLTCSIGIAPNKLLAKLASDMKKPD 164
Query: 64 GQFVL-PNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQ-KGSLLCAVF 121
G ++ P + +M I PI+ + GIG T L + GI TC E+ + +L F
Sbjct: 165 GLTIIRPEEVTRLMEII---PIQDLCGIGVKTRKQLNSL-GIQTCGELGRFPVEILRRTF 220
Query: 122 SHSTADFFLSVGLGLG-STNTP--QARFRKSISSERTFS--VTEDKALLYRKLAEIAEML 176
D +G G+ S P +A KS+ T +T + +L + L +++EM+
Sbjct: 221 G-VIGDRLHLMGKGIDDSPVVPVEEAEEVKSVGHSMTLDRDLTARRDIL-KYLLQLSEMV 278
Query: 177 SADMQKEXXXXXXXXXXXXXASFEVRTRAVTLQKYISSSEDILKHASVLLKA-ELPVSLR 235
++ A F + T + +S+E+I A +L EL +R
Sbjct: 279 GRRARRYGVAGKTVHLTIRYADFTTVGKQQTRNQATNSTEEIYAEAVKILDTFELLQPVR 338
Query: 236 LIGLRVTQFNEDKVRAP 252
L+G+R+T + + P
Sbjct: 339 LLGVRITNLCYQREQLP 355
>TIGR_CMR|GSU_0043 [details] [associations]
symbol:GSU_0043 "ImpB/MucB/SamB family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0009650 "UV protection"
evidence=ISS] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0000287 GO:GO:0003684
GO:GO:0006281 GO:GO:0006261 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0003887 KO:K02346 Gene3D:3.30.1490.100 SUPFAM:SSF100879
HOGENOM:HOG000082710 HSSP:P96022 ProtClustDB:CLSK827609
RefSeq:NP_951105.1 ProteinModelPortal:Q74H50 GeneID:2688550
KEGG:gsu:GSU0043 PATRIC:22022827 OMA:ANRIILH
BioCyc:GSUL243231:GH27-86-MONOMER Uniprot:Q74H50
Length = 413
Score = 214 (80.4 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 76/257 (29%), Positives = 123/257 (47%)
Query: 4 SLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPN 63
S+DEA+LD+T G S IA ++ + GLTCS G+APN+LLAK+ SD+ KP+
Sbjct: 106 SIDEAFLDVTGSLALFG-SAETIACRIKALIRHRFGLTCSIGIAPNKLLAKLASDMKKPD 164
Query: 64 GQFVL-PNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQ-KGSLLCAVF 121
G ++ P + +M I PI+ + GIG T L + GI TC E+ + +L F
Sbjct: 165 GLTIIRPEEVTRLMEII---PIQDLCGIGVKTRKQLNSL-GIQTCGELGRFPVEILRRTF 220
Query: 122 SHSTADFFLSVGLGLG-STNTP--QARFRKSISSERTFS--VTEDKALLYRKLAEIAEML 176
D +G G+ S P +A KS+ T +T + +L + L +++EM+
Sbjct: 221 G-VIGDRLHLMGKGIDDSPVVPVEEAEEVKSVGHSMTLDRDLTARRDIL-KYLLQLSEMV 278
Query: 177 SADMQKEXXXXXXXXXXXXXASFEVRTRAVTLQKYISSSEDILKHASVLLKA-ELPVSLR 235
++ A F + T + +S+E+I A +L EL +R
Sbjct: 279 GRRARRYGVAGKTVHLTIRYADFTTVGKQQTRNQATNSTEEIYAEAVKILDTFELLQPVR 338
Query: 236 LIGLRVTQFNEDKVRAP 252
L+G+R+T + + P
Sbjct: 339 LLGVRITNLCYQREQLP 355
>DICTYBASE|DDB_G0287149 [details] [associations]
symbol:DDB_G0287149 "UMUC-like DNA-repair protein"
species:44689 "Dictyostelium discoideum" [GO:0006281 "DNA repair"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 dictyBase:DDB_G0287149
GO:GO:0003684 GO:GO:0006281 GO:GO:0003887 eggNOG:COG0389
EMBL:AAFI02000098 KO:K03511 RefSeq:XP_637357.1
ProteinModelPortal:Q54KS3 EnsemblProtists:DDB0304434 GeneID:8625979
KEGG:ddi:DDB_G0287149 InParanoid:Q54KS3 OMA:YANVEEM Uniprot:Q54KS3
Length = 517
Score = 215 (80.7 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 42/113 (37%), Positives = 76/113 (67%)
Query: 1 MAASLDEAYLDITEVCRER-GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDI 59
++ SLDE +DITE ++ ++GI++A +L+ ++E+ LTCS G++ + LL+K+ S+I
Sbjct: 173 VSPSLDEGCIDITEYLKDNENLTGIDVANQLQNDIFEKTTLTCSMGISCSPLLSKISSEI 232
Query: 60 NKPNGQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQ 112
NKPNG F L D+ FI ++ I+K+ GIGKV + +L+ + G+ ++++
Sbjct: 233 NKPNGYFYL--DKQYSQEFIKTIQIKKLPGIGKVRQELLKTL-GLEFVSDIIE 282
>UNIPROTKB|E2RC81 [details] [associations]
symbol:POLH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0010225 "response to UV-C" evidence=IEA]
[GO:0006301 "postreplication repair" evidence=IEA] [GO:0006290
"pyrimidine dimer repair" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0000731
"DNA synthesis involved in DNA repair" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005634 GO:GO:0005737 GO:GO:0003684
GO:GO:0010225 GO:GO:0000731 GO:GO:0006301 GO:GO:0003887
GO:GO:0006290 Gene3D:3.30.1490.100 SUPFAM:SSF100879 KO:K03509
CTD:5429 OMA:SPPLTML InterPro:IPR017061 PIRSF:PIRSF036603
GeneTree:ENSGT00530000062942 EMBL:AAEX03008345 RefSeq:XP_532150.2
Ensembl:ENSCAFT00000003028 GeneID:474915 KEGG:cfa:474915
NextBio:20850851 Uniprot:E2RC81
Length = 712
Score = 151 (58.2 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 71/298 (23%), Positives = 131/298 (43%)
Query: 23 GIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSL 82
G I EE+R ++ E G CSAG++ N++LAK+ +NKPN Q ++ + +V S +
Sbjct: 193 GAVIVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHG--SVPQLFSQM 250
Query: 83 PIRKIGGIG-KVTEHILRDVFGINTCEEMLQ-KGSLLCAVFSHSTADFFLSVGLGLGSTN 140
PI KI +G K+ ++ ++ G+ E+ Q S L + F + ++ G+
Sbjct: 251 PISKIRSLGGKLGASVI-EILGVEYMGELTQFTESQLQSHFGEKNGSWLYAMCRGIEHDP 309
Query: 141 TPQARFRKSISSERTFS-----VTEDKALLYR-KLA-EIAEMLSADMQKEXXXXXXXXXX 193
+ K+I + F T ++ + +LA E+ E L+ D + +
Sbjct: 310 VKPRQLPKTIGCSKNFPGKTALTTREQVQWWLLQLAQELEERLTKD-RNDNDRVATQLAV 368
Query: 194 XXXASFEVRT----RAVTLQKYISS--SED---ILKHASVL-LKAELPVSLRLIGLRVTQ 243
+ R R L +Y + S D ++K+ + +K + L ++ L T+
Sbjct: 369 SIRVQGDKRLSSLRRCCALTRYDAHKMSHDAFAVIKNCNTSGIKTDWSPPLTMLFLCATK 428
Query: 244 FNEDKVRAPSDPTQKTLTNFMTSGHASKKIVGDQNSLGSDINDDCLID-DKETSVSLD 300
F+ APS T +T F++S +S V +S D + K+ + SL+
Sbjct: 429 FSAP---APSSCTD--ITTFLSSDPSSVTNVPVSSSEAKTQGCDLAVTATKKATTSLE 481
Score = 80 (33.2 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 20/69 (28%), Positives = 34/69 (49%)
Query: 392 DDYKCSLCGTEMPPSFIEERQEHSDFHLAERLQK---EESGSDLRILTHRERCVRTQRDH 448
D C CG+ +P + E EH+D+H A LQK + S ++++ + R +
Sbjct: 631 DQVPCEKCGSLVP---VWEMPEHTDYHFALELQKSFLQPHSSTMQVVPASSQSKRNPKSP 687
Query: 449 IASHRKRKK 457
AS+ KR +
Sbjct: 688 SASNSKRTR 696
Score = 68 (29.0 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 3 ASLDEAYLDITEVCRER--GISGIEIAEELRTSVYEEAGL 40
AS+DEAY+D+T +ER + G I+ +L + Y E GL
Sbjct: 112 ASIDEAYIDLTSAVQERLQNLQGQPISADLLPTTYIE-GL 150
>FB|FBgn0037141 [details] [associations]
symbol:DNApol-eta "DNApol-eta" species:7227 "Drosophila
melanogaster" [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IMP;IDA;NAS] [GO:0019985 "translesion synthesis"
evidence=ISS;NAS;IDA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IMP] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0003684 GO:GO:0000724 GO:GO:0003887
GO:GO:0019985 eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879
HSSP:P96022 InterPro:IPR017061 PIRSF:PIRSF036603 EMBL:AY058771
EMBL:AB049433 EMBL:AB036766 IntAct:Q9GNC0 STRING:Q9GNC0
FlyBase:FBgn0037141 InParanoid:Q9GNC0 OrthoDB:EOG4XPNX1
Uniprot:Q9GNC0
Length = 885
Score = 172 (65.6 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 49/171 (28%), Positives = 89/171 (52%)
Query: 19 RGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTF 78
R + G +A E+R +V +E G CSAG+A N++LAK+ + +NKPN Q +LP A +
Sbjct: 204 RLLIGASVAGEVRAAVKKETGYECSAGIAHNKILAKLAAGMNKPNKQTILPLTETA--SL 261
Query: 79 ISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSL-LCAVFSHSTADFFLSVGLGLG 137
SLP+ KI G+G ++ + GI ++++ + L F + ++ G+
Sbjct: 262 FDSLPVGKIKGLGGKFGEVVCETLGIKFMGQVVKFSEVDLQRKFDEKNGTWLFNISRGID 321
Query: 138 -STNTPQARFRKSISSERTF----SVTEDKALLYRKLAEIAEMLSADMQKE 183
TP+ + KSI + F ++T K L + L E++ ++ ++K+
Sbjct: 322 LEAVTPRF-YSKSIGCCKKFPGRNNITGLKTLQHW-LGELSSEINDRLEKD 370
Score = 69 (29.3 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 406 SFIE--ERQEHSDFHLAERLQKEESGSDLRILT---HRERCVRTQRDHIASHRKRKKQKL 460
+FI+ + EH D+H+A+ LQ+E + DLR T ++E+ Q S +K
Sbjct: 810 AFIKCVDMPEHLDYHVAKNLQRELNQQDLRTRTAALNKEKTSPVQPKK-QSQKKLNSTIS 868
Query: 461 FEKEGTHIPIDMFFAKRN 478
GT I FF++ N
Sbjct: 869 ASSSGTKT-IAQFFSQSN 885
Score = 67 (28.6 bits), Expect = 2.5e-13, Sum P(3) = 2.5e-13
Identities = 19/69 (27%), Positives = 28/69 (40%)
Query: 391 LDDYKCSLCGTEMPPSFIEERQEHSDFHLAERLQKEESGSDLRILTHRERCVRTQRDHIA 450
L KC CG +P ++ Q H D H A+ L + LR ER Q+ +
Sbjct: 703 LPTIKCDQCGANIPDE-VKSLQTHRDHHFAQELSRT-----LRSTEREERTQSRQKISLK 756
Query: 451 SHRKRKKQK 459
+K +K
Sbjct: 757 PTPPKKSKK 765
Score = 59 (25.8 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 12/17 (70%), Positives = 13/17 (76%)
Query: 3 ASLDEAYLDITEVCRER 19
AS+DEAYLDITE R
Sbjct: 122 ASVDEAYLDITETVNHR 138
>UNIPROTKB|B4DG64 [details] [associations]
symbol:POLH "DNA polymerase eta" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006290 "pyrimidine dimer repair" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0005737 GO:GO:0003684 GO:GO:0006301
GO:GO:0003887 GO:GO:0006290 Gene3D:3.30.1490.100 SUPFAM:SSF100879
EMBL:AL353602 EMBL:AL355802 UniGene:Hs.655467 HGNC:HGNC:9181
HOVERGEN:HBG053633 InterPro:IPR017061 PIRSF:PIRSF036603
EMBL:AK294430 IPI:IPI00646080 SMR:B4DG64 STRING:B4DG64
Ensembl:ENST00000535400 Uniprot:B4DG64
Length = 651
Score = 159 (61.0 bits), Expect = 5.0e-13, Sum P(3) = 5.0e-13
Identities = 67/267 (25%), Positives = 122/267 (45%)
Query: 23 GIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSL 82
G I EE+R ++ E G CSAG++ N++LAK+ +NKPN Q ++ + +V S +
Sbjct: 131 GAVIVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHG--SVPQLFSQM 188
Query: 83 PIRKIGGIG-KVTEHILRDVFGINTCEEMLQ-KGSLLCAVFSHSTADFFLSVGLGLGSTN 140
PIRKI +G K+ ++ ++ GI E+ Q S L + F + ++ G+
Sbjct: 189 PIRKIRSLGGKLGASVI-EILGIEYMGELTQFTESQLQSHFGEKNGSWLYAMCRGIEHDP 247
Query: 141 TPQARFRKSISSERTFS-----VTEDKALLYR-KLA-EIAEMLSADMQKEXXXXXXXXXX 193
+ K+I + F T ++ + +LA E+ E L+ D + +
Sbjct: 248 VKPRQLPKTIGCSKNFPGKTALATREQVQWWLLQLAQELEERLTKD-RNDNDRVATQLVV 306
Query: 194 XXXASFEVRT----RAVTLQKYISS--SED---ILKHASVL-LKAELPVSLRLIGLRVTQ 243
+ R R L +Y + S D ++K+ + ++ E L ++ L T+
Sbjct: 307 SIRVQGDKRLSSLRRCCALTRYDAHKMSHDAFTVIKNCNTSGIQTEWSPPLTMLFLCATK 366
Query: 244 FNEDKVRAPSDPTQKTLTNFMTSGHAS 270
F+ APS T +T+F++S +S
Sbjct: 367 FSAS---APSSSTD--ITSFLSSDPSS 388
Score = 68 (29.0 bits), Expect = 5.0e-13, Sum P(3) = 5.0e-13
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 3 ASLDEAYLDITEVCRER--GISGIEIAEELRTSVYEEAGL 40
AS+DEAY+D+T +ER + G I+ +L S Y E GL
Sbjct: 50 ASIDEAYVDLTSAVQERLQKLQGQPISADLLPSTYIE-GL 88
Score = 64 (27.6 bits), Expect = 5.0e-13, Sum P(3) = 5.0e-13
Identities = 27/100 (27%), Positives = 41/100 (41%)
Query: 326 CSFSNKISEVEKIHENEVSQLLEGNSLVLRQEEGSCCDGVEEVDKDITPDNKVGTSSNQK 385
C +K+ E K E+ L NS + S V EV + TP+ + + +Q
Sbjct: 516 CEGVSKLEESSKATPAEMD--LAHNSQSMHASSAS--KSVLEVTQKATPNPSLLAAEDQ- 570
Query: 386 DQFIWLDDYKCSLCGTEMPPSFIEERQEHSDFHLAERLQK 425
C CG+ +P + + EH D+H A LQK
Sbjct: 571 --------VPCEKCGSLVP---VWDMPEHMDYHFALELQK 599
>UNIPROTKB|Q0BZW2 [details] [associations]
symbol:dinB "DNA polymerase IV" species:228405 "Hyphomonas
neptunium ATCC 15444" [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=ISS] [GO:0006260 "DNA replication" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005737 GO:GO:0000287 GO:GO:0003684 GO:GO:0006260
GO:GO:0006281 GO:GO:0006261 EMBL:CP000158 GenomeReviews:CP000158_GR
GO:GO:0003887 eggNOG:COG0389 HOGENOM:HOG000082707 KO:K02346
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 RefSeq:YP_760981.1 ProteinModelPortal:Q0BZW2
STRING:Q0BZW2 GeneID:4289730 KEGG:hne:HNE_2286 PATRIC:32217415
OMA:PALCRDC ProtClustDB:PRK02794
BioCyc:HNEP228405:GI69-2308-MONOMER Uniprot:Q0BZW2
Length = 424
Score = 199 (75.1 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 70/250 (28%), Positives = 116/250 (46%)
Query: 4 SLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPN 63
S+DEAYLD++ R G L +V E G+T S G++ N+ LAK S+++KP
Sbjct: 133 SIDEAYLDLSGTDRLHGAPPAASLARLAKNVEREVGVTVSVGLSSNKFLAKTASELDKPR 192
Query: 64 G-QFVLPNDRMAVMTFISSLPIRKIGGIG-KVTEHILRDVFGINTCEEMLQKGSLLCAVF 121
G + P + A F++ P+ + G+G K E + +D G T E+ +QK L +
Sbjct: 193 GFAIIAPEEAEA---FLAPHPVGFLHGVGPKFAESLNKD--GFYTIED-IQKADLKSLIR 246
Query: 122 SHS-TADFFLSVGLGLGSTNTPQARFRKSISSERTF-SVTEDKALLYRKLAEIAEMLSAD 179
+ T D+ G + RKS+SSE TF T D +L L ++ + +AD
Sbjct: 247 RYGETGDWLKRCAHGRDNRKVNPHEDRKSVSSETTFFEDTADIGILEDHLWRLS-VKTAD 305
Query: 180 MQK-EXXXXXXXXXXXXXASFEVRTRAVTLQKYISSSEDILKHASVLLKAELP--VSLRL 236
K E + F TR ++L + ++ + + + LL E V RL
Sbjct: 306 RAKAEGVSGRVVTLKLKTSDFHPLTRRLSLTEPTQLAQVVFRASRPLLLKEATGRVKYRL 365
Query: 237 IGLRVTQFNE 246
IG+ ++ ++
Sbjct: 366 IGVGLSDLSD 375
>UNIPROTKB|Q9Y253 [details] [associations]
symbol:POLH "DNA polymerase eta" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006290 "pyrimidine dimer repair"
evidence=IEA] [GO:0006301 "postreplication repair" evidence=IEA]
[GO:0000731 "DNA synthesis involved in DNA repair" evidence=IDA]
[GO:0010225 "response to UV-C" evidence=IDA] [GO:0006282
"regulation of DNA repair" evidence=TAS] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_216
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0005737
GO:GO:0005654 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0010225 GO:GO:0000731 GO:GO:0006301 GO:GO:0006282
GO:GO:0003887 GO:GO:0006290 eggNOG:COG0389 Gene3D:3.30.1490.100
SUPFAM:SSF100879 CleanEx:HS_POLH KO:K03509 EMBL:AL353602
EMBL:AB024313 EMBL:AF158185 EMBL:AB038008 EMBL:AY388614
EMBL:AL355802 EMBL:BC015742 IPI:IPI00008011 IPI:IPI00552037
RefSeq:NP_006493.1 UniGene:Hs.655467 PDB:2I5O PDB:2LSK PDB:3MR2
PDB:3MR3 PDB:3MR5 PDB:3MR6 PDB:3SI8 PDB:3TQ1 PDB:4DL2 PDB:4DL3
PDB:4DL4 PDB:4DL5 PDB:4DL6 PDB:4DL7 PDB:4ECQ PDB:4ECR PDB:4ECS
PDB:4ECT PDB:4ECU PDB:4ECV PDB:4ECW PDB:4ECX PDB:4ECY PDB:4ECZ
PDB:4ED0 PDB:4ED1 PDB:4ED2 PDB:4ED3 PDB:4ED6 PDB:4ED7 PDB:4ED8
PDB:4EEY PDBsum:2I5O PDBsum:2LSK PDBsum:3MR2 PDBsum:3MR3
PDBsum:3MR5 PDBsum:3MR6 PDBsum:3SI8 PDBsum:3TQ1 PDBsum:4DL2
PDBsum:4DL3 PDBsum:4DL4 PDBsum:4DL5 PDBsum:4DL6 PDBsum:4DL7
PDBsum:4ECQ PDBsum:4ECR PDBsum:4ECS PDBsum:4ECT PDBsum:4ECU
PDBsum:4ECV PDBsum:4ECW PDBsum:4ECX PDBsum:4ECY PDBsum:4ECZ
PDBsum:4ED0 PDBsum:4ED1 PDBsum:4ED2 PDBsum:4ED3 PDBsum:4ED6
PDBsum:4ED7 PDBsum:4ED8 PDBsum:4EEY ProteinModelPortal:Q9Y253
SMR:Q9Y253 IntAct:Q9Y253 MINT:MINT-2789553 STRING:Q9Y253
PhosphoSite:Q9Y253 DMDM:59798441 PRIDE:Q9Y253
Ensembl:ENST00000372226 Ensembl:ENST00000372236 GeneID:5429
KEGG:hsa:5429 UCSC:uc003ovq.4 CTD:5429 GeneCards:GC06P043543
HGNC:HGNC:9181 HPA:HPA006721 HPA:HPA026762 MIM:278750 MIM:603968
neXtProt:NX_Q9Y253 Orphanet:90342 PharmGKB:PA279
HOGENOM:HOG000115605 HOVERGEN:HBG053633 InParanoid:Q9Y253
OMA:SPPLTML OrthoDB:EOG4RBQJ8 PhylomeDB:Q9Y253 SABIO-RK:Q9Y253
BindingDB:Q9Y253 ChEMBL:CHEMBL5542 EvolutionaryTrace:Q9Y253
GenomeRNAi:5429 NextBio:21005 ArrayExpress:Q9Y253 Bgee:Q9Y253
Genevestigator:Q9Y253 GermOnline:ENSG00000170734 InterPro:IPR017061
PIRSF:PIRSF036603 Uniprot:Q9Y253
Length = 713
Score = 159 (61.0 bits), Expect = 7.3e-13, Sum P(3) = 7.3e-13
Identities = 67/267 (25%), Positives = 122/267 (45%)
Query: 23 GIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSL 82
G I EE+R ++ E G CSAG++ N++LAK+ +NKPN Q ++ + +V S +
Sbjct: 193 GAVIVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHG--SVPQLFSQM 250
Query: 83 PIRKIGGIG-KVTEHILRDVFGINTCEEMLQ-KGSLLCAVFSHSTADFFLSVGLGLGSTN 140
PIRKI +G K+ ++ ++ GI E+ Q S L + F + ++ G+
Sbjct: 251 PIRKIRSLGGKLGASVI-EILGIEYMGELTQFTESQLQSHFGEKNGSWLYAMCRGIEHDP 309
Query: 141 TPQARFRKSISSERTFS-----VTEDKALLYR-KLA-EIAEMLSADMQKEXXXXXXXXXX 193
+ K+I + F T ++ + +LA E+ E L+ D + +
Sbjct: 310 VKPRQLPKTIGCSKNFPGKTALATREQVQWWLLQLAQELEERLTKD-RNDNDRVATQLVV 368
Query: 194 XXXASFEVRT----RAVTLQKYISS--SED---ILKHASVL-LKAELPVSLRLIGLRVTQ 243
+ R R L +Y + S D ++K+ + ++ E L ++ L T+
Sbjct: 369 SIRVQGDKRLSSLRRCCALTRYDAHKMSHDAFTVIKNCNTSGIQTEWSPPLTMLFLCATK 428
Query: 244 FNEDKVRAPSDPTQKTLTNFMTSGHAS 270
F+ APS T +T+F++S +S
Sbjct: 429 FSAS---APSSSTD--ITSFLSSDPSS 450
Score = 68 (29.0 bits), Expect = 7.3e-13, Sum P(3) = 7.3e-13
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 3 ASLDEAYLDITEVCRER--GISGIEIAEELRTSVYEEAGL 40
AS+DEAY+D+T +ER + G I+ +L S Y E GL
Sbjct: 112 ASIDEAYVDLTSAVQERLQKLQGQPISADLLPSTYIE-GL 150
Score = 64 (27.6 bits), Expect = 7.3e-13, Sum P(3) = 7.3e-13
Identities = 27/100 (27%), Positives = 41/100 (41%)
Query: 326 CSFSNKISEVEKIHENEVSQLLEGNSLVLRQEEGSCCDGVEEVDKDITPDNKVGTSSNQK 385
C +K+ E K E+ L NS + S V EV + TP+ + + +Q
Sbjct: 578 CEGVSKLEESSKATPAEMD--LAHNSQSMHASSAS--KSVLEVTQKATPNPSLLAAEDQ- 632
Query: 386 DQFIWLDDYKCSLCGTEMPPSFIEERQEHSDFHLAERLQK 425
C CG+ +P + + EH D+H A LQK
Sbjct: 633 --------VPCEKCGSLVP---VWDMPEHMDYHFALELQK 661
>UNIPROTKB|P63987 [details] [associations]
symbol:dinB2 "DNA polymerase IV 2" species:1773
"Mycobacterium tuberculosis" [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005829 GO:GO:0005886 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0006281 EMBL:BX842581 GO:GO:0003887 eggNOG:COG0389
HOGENOM:HOG000082707 KO:K02346 Gene3D:3.30.1490.100
SUPFAM:SSF100879 PIR:A70649 RefSeq:NP_217572.1 RefSeq:NP_337660.1
RefSeq:YP_006516517.1 ProteinModelPortal:P63987 SMR:P63987
EnsemblBacteria:EBMYCT00000003933 EnsemblBacteria:EBMYCT00000069414
GeneID:13317860 GeneID:887519 GeneID:923303 KEGG:mtc:MT3142
KEGG:mtu:Rv3056 KEGG:mtv:RVBD_3056 PATRIC:18128668
TubercuList:Rv3056 OMA:IIAHIDI ProtClustDB:PRK03352 Uniprot:P63987
Length = 346
Score = 184 (69.8 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 70/244 (28%), Positives = 118/244 (48%)
Query: 6 DEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQ 65
DEAYL + + IE+AEE+R + + GL+CS G++ N+ AK+ + + KP G
Sbjct: 111 DEAYLAVAPGTPD---DPIEVAEEIRKVILSQTGLSCSIGISDNKQRAKIATGLAKPAGI 167
Query: 66 FVLPNDR-MAVMTFISSLPIRKIGGIG-KVTEHILRDVFGINTCEEMLQKGS-LLCAVFS 122
+ L + MA+M + + G+G K T+ + + GINT ++ S LL + F
Sbjct: 168 YQLTDANWMAIM---GDRTVEALWGVGPKTTKRLAK--LGINTVYQLAHTDSGLLMSTFG 222
Query: 123 HSTADFFLSVGLGLGSTN-TPQARFRKSISSERTF--SVTEDKALLYRKLAEIAEMLSAD 179
TA +L + G G T + QA +S S TF +T ++ + + E+A+ +
Sbjct: 223 PRTA-LWLLLAKGGGDTEVSAQAWVPRSRSHAVTFPRDLT-CRSEMESAVTELAQRTLNE 280
Query: 180 MQKEXXXXXXXXXXXXXASFEVRTRAVTLQKYISSSEDILKHAS--VLLKAELPVSLRLI 237
+ A+F RT+ LQ S+ D++ A+ VL EL +RL+
Sbjct: 281 VVASSRTVTRVAVTVRTATFYTRTKIRKLQAP-STDPDVITAAARHVLDLFELDRPVRLL 339
Query: 238 GLRV 241
G+R+
Sbjct: 340 GVRL 343
>FB|FBgn0035150 [details] [associations]
symbol:Rev1 "Rev1" species:7227 "Drosophila melanogaster"
[GO:0006281 "DNA repair" evidence=ISS] [GO:0017125 "deoxycytidyl
transferase activity" evidence=ISS;NAS] [GO:0019985 "translesion
synthesis" evidence=NAS] [GO:0000287 "magnesium ion binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=IMP] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 EMBL:AE014296 GO:GO:0000287
GO:GO:0003684 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
GO:GO:0010569 GO:GO:0003887 GO:GO:0019985 Gene3D:3.30.1490.100
SUPFAM:SSF100879 GO:GO:0017125 GeneTree:ENSGT00530000062942
KO:K03515 OMA:TIPYDFD CTD:51455 FlyBase:FBgn0035150 EMBL:AB049435
RefSeq:NP_612047.1 UniGene:Dm.2203 SMR:Q9W0P2 IntAct:Q9W0P2
STRING:Q9W0P2 EnsemblMetazoa:FBtr0072557 GeneID:38079
KEGG:dme:Dmel_CG12189 UCSC:CG12189-RA InParanoid:Q9W0P2
GenomeRNAi:38079 NextBio:806885 Uniprot:Q9W0P2
Length = 995
Score = 191 (72.3 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 44/159 (27%), Positives = 80/159 (50%)
Query: 2 AASLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINK 61
A S DE ++++T++ E + + LR VY + G CSAGVA N+LLA++ + K
Sbjct: 417 AVSCDEMFVELTDLAHELNVDVMAFVSHLRQEVYSKTGCPCSAGVAGNKLLARMATKEAK 476
Query: 62 PNGQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSL--LCA 119
PNGQF+L + ++ +++ + + + G+G H L+ G+N C ++ Q +L +
Sbjct: 477 PNGQFLLDSSN-DILAYMAPMSLDLLPGVGSSISHKLKQA-GLNNCGDV-QNTTLEKMEK 533
Query: 120 VFSHSTADFFLSVGLGLGSTNTPQARFRKSISSERTFSV 158
V G+ + RK++S+E F +
Sbjct: 534 VLGKKLGQNLFQNCRGIDDRPLAYEQIRKTVSAEMNFGI 572
>TAIR|locus:2156309 [details] [associations]
symbol:POLH "Y-family DNA polymerase H" species:3702
"Arabidopsis thaliana" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006281
"DNA repair" evidence=IEA;ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010224 "response to UV-B" evidence=IMP]
[GO:0042276 "error-prone translesion synthesis" evidence=IDA]
[GO:0006261 "DNA-dependent DNA replication" evidence=RCA]
[GO:0042732 "D-xylose metabolic process" evidence=RCA]
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 EMBL:CP002688
GO:GO:0003684 GO:GO:0010224 GO:GO:0003887 GO:GO:0042276
Gene3D:3.30.1490.100 SUPFAM:SSF100879 HSSP:P96022 KO:K03509
InterPro:IPR017061 PIRSF:PIRSF036603 EMBL:AJ416380 IPI:IPI00537089
RefSeq:NP_568638.2 UniGene:At.19023 SMR:Q8H2D5 IntAct:Q8H2D5
STRING:Q8H2D5 EnsemblPlants:AT5G44740.2 GeneID:834503
KEGG:ath:AT5G44740 TAIR:At5g44740 InParanoid:Q8H2D5 OMA:CPLRYGT
ProtClustDB:CLSN2680435 Genevestigator:Q8H2D5 Uniprot:Q8H2D5
Length = 672
Score = 182 (69.1 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 55/175 (31%), Positives = 92/175 (52%)
Query: 17 RERGIS-GIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAV 75
R++ +S GI I ELR V +E TCSAG+A N++LAK+ S +NKP Q V+P AV
Sbjct: 181 RDKLLSCGIIIVAELRKQVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTVVPY--AAV 238
Query: 76 MTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQ-KGSLLCAVFSHSTADFFLSVGL 134
+SSLPI+K+ +G L+ G++T ++LQ + L + +T + ++
Sbjct: 239 QELLSSLPIKKMKQLGGKLGTSLQTDLGVDTVGDLLQFSETKLQEHYGVNTGTWLWNIAR 298
Query: 135 GLGSTNTPQARFRKSISSERTF-------SVTEDKALLYRKLAEIAEMLSADMQK 182
G+ KS S +TF S++ + L + E++E L +D+++
Sbjct: 299 GISGEEVQGRLLPKSHGSGKTFPGPRALKSLSTVQHWLNQLSEELSERLGSDLEQ 353
Score = 47 (21.6 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 8/12 (66%), Positives = 11/12 (91%)
Query: 3 ASLDEAYLDITE 14
AS+DE YLD+T+
Sbjct: 117 ASIDEVYLDLTD 128
>ZFIN|ZDB-GENE-060421-4949 [details] [associations]
symbol:polh "polymerase (DNA directed), eta"
species:7955 "Danio rerio" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 ZFIN:ZDB-GENE-060421-4949 GO:GO:0003684
GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100 SUPFAM:SSF100879
InterPro:IPR017061 PIRSF:PIRSF036603 GeneTree:ENSGT00530000062942
EMBL:AL929536 IPI:IPI00758987 Ensembl:ENSDART00000139589
OMA:MKSLEKH ArrayExpress:F1Q7Z9 Bgee:F1Q7Z9 Uniprot:F1Q7Z9
Length = 749
Score = 147 (56.8 bits), Expect = 1.3e-10, Sum P(4) = 1.3e-10
Identities = 39/136 (28%), Positives = 64/136 (47%)
Query: 23 GIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSL 82
G I E++R +V E G CSAG++ N++LAK+ +NKPN Q VLP +V S+L
Sbjct: 192 GALIVEQMRAAVEEHTGFRCSAGISHNKVLAKLACGLNKPNRQTVLPLS--SVPQLFSTL 249
Query: 83 PIRKIGGIGKVTEHILRDVFGINTCEEMLQ-KGSLLCAVFSHSTADFFLSVGLGLGSTNT 141
PI KI +G + + + ++ + + L F T + + G+
Sbjct: 250 PISKIRNLGGKLGSSITETLSVENMGDLTRFSRAQLEQHFGDKTGPWLYDLCRGIEFEPV 309
Query: 142 PQARFRKSISSERTFS 157
+ KSI + F+
Sbjct: 310 KPRQLPKSIGCSKNFA 325
Score = 62 (26.9 bits), Expect = 1.3e-10, Sum P(4) = 1.3e-10
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 396 CSLCGTEMPPSFIEERQEHSDFHLAERLQKE-ESGSDLRILT 436
C CG ++ + E EH+D+H A LQK SGS ++ T
Sbjct: 686 CERCGMKV---LVWEFPEHADYHFALDLQKSFSSGSPSQMKT 724
Score = 54 (24.1 bits), Expect = 1.3e-10, Sum P(4) = 1.3e-10
Identities = 10/17 (58%), Positives = 14/17 (82%)
Query: 3 ASLDEAYLDITEVCRER 19
AS+DEAY+D+T +ER
Sbjct: 112 ASIDEAYMDLTASVQER 128
Score = 45 (20.9 bits), Expect = 1.3e-10, Sum P(4) = 1.3e-10
Identities = 17/80 (21%), Positives = 34/80 (42%)
Query: 324 ENCSFSNKISEVEKIHENEV-SQLLEGNSLVLRQEEGSCCDGVEEVDKDITPDNKVGTSS 382
EN + + + + + + E+ + L G+ E +C D + I+ + +
Sbjct: 480 ENTTSISAFFQRKSLEKQEIQNSLCPGDQSTSASGEHACGDTAAQKTTAISTFLQRESLE 539
Query: 383 NQKDQFIWLDDYKCSLCGTE 402
Q+ Q + LDD S+C E
Sbjct: 540 KQEIQNVSLDDEDQSVCAPE 559
>ZFIN|ZDB-GENE-081105-180 [details] [associations]
symbol:si:dkey-57a22.7 "si:dkey-57a22.7"
species:7955 "Danio rerio" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0000287
"magnesium ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 ZFIN:ZDB-GENE-081105-180
GO:GO:0000287 GO:GO:0003684 GO:GO:0006281 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0003887 eggNOG:COG0389
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 GeneTree:ENSGT00530000062942 KO:K03515
HOGENOM:HOG000154094 HOVERGEN:HBG054140 EMBL:CR392332 EMBL:CR536604
IPI:IPI00862463 RefSeq:NP_001116772.1 UniGene:Dr.61598 SMR:B0UY97
Ensembl:ENSDART00000134915 GeneID:570043 KEGG:dre:570043
NextBio:20889959 Uniprot:B0UY97
Length = 1268
Score = 183 (69.5 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 48/158 (30%), Positives = 79/158 (50%)
Query: 2 AASLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINK 61
A S DEA +D T + E G+S E+A +R + E+ G S G++ N LLA++ + K
Sbjct: 605 ALSCDEALVDATALLVELGVSPDELARSIREDIKEKTGCCASVGMSSNILLARMATRKAK 664
Query: 62 PNGQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKG-SLLCAV 120
P GQ++L ++ V FI P+ + G+G+ L + G++TC ++ Q S L
Sbjct: 665 PKGQYLLRSEE--VDDFIRDQPVSSLPGVGRSMSSKLTSL-GVSTCGDLQQLSLSQLQRE 721
Query: 121 FSHSTADFFLSVGLGLGSTNTPQARFRKSISSERTFSV 158
F T GL + RKS+S+E +++
Sbjct: 722 FGPRTGQTLFRFCRGLDDRPVRSEKERKSVSAEMNYNI 759
>UNIPROTKB|F1MZ79 [details] [associations]
symbol:POLH "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0010225 "response to UV-C" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0006290 "pyrimidine
dimer repair" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IEA] [GO:0000731 "DNA synthesis
involved in DNA repair" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0005737 GO:GO:0003684 GO:GO:0010225
GO:GO:0000731 GO:GO:0006301 GO:GO:0003887 GO:GO:0006290
Gene3D:3.30.1490.100 SUPFAM:SSF100879 OMA:SPPLTML
InterPro:IPR017061 PIRSF:PIRSF036603 GeneTree:ENSGT00530000062942
EMBL:DAAA02055099 IPI:IPI00691559 Ensembl:ENSBTAT00000007900
Uniprot:F1MZ79
Length = 710
Score = 134 (52.2 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 29/91 (31%), Positives = 53/91 (58%)
Query: 23 GIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSL 82
G I EE+R ++ + G CSAG++ N++LAK+ +NKPN Q ++ + +V + +
Sbjct: 192 GAVIVEEMRAAIERQTGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHG--SVPQLFNQV 249
Query: 83 PIRKIGGIG-KVTEHILRDVFGINTCEEMLQ 112
PI KI +G K+ ++ ++ G+ E+ Q
Sbjct: 250 PISKIRNLGGKLGASVI-EILGVEYMGELTQ 279
Score = 70 (29.7 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 21/86 (24%), Positives = 40/86 (46%)
Query: 377 KVGTSSNQKDQFIWLDDY-KCSLCGTEMPPSFIEERQEHSDFHLAERLQK---EESGSDL 432
+V + F+ +D C CG+ +P + + EHSD+H A LQ + S+
Sbjct: 612 EVAQKATMTSSFLAAEDQVPCEKCGSLVP---VWDMPEHSDYHFALELQNSFLQPHSSNP 668
Query: 433 RIL-THRERCVRTQRDHIASHRKRKK 457
+++ + R + +AS+ KR +
Sbjct: 669 QVVPASSPQSKRNPKSPLASNNKRPR 694
Score = 55 (24.4 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 10/16 (62%), Positives = 13/16 (81%)
Query: 4 SLDEAYLDITEVCRER 19
S+DEAYLD+T +ER
Sbjct: 112 SIDEAYLDLTSAVQER 127
Score = 41 (19.5 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 107 CEEMLQKGSLLCAVFSHSTADFFLSVGLGLGSTNTPQARFRKSISSERTFSVTEDK 162
CE+ML+ GS A LS L ST+ + + +++S +F ED+
Sbjct: 576 CEKMLKLGSPKTTPTEMDLAQNSLSSLASLTSTSALEVAQKATMTS--SFLAAEDQ 629
>UNIPROTKB|P63985 [details] [associations]
symbol:dinB1 "DNA polymerase IV 1" species:1773
"Mycobacterium tuberculosis" [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005829 GO:GO:0005886 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0006281 EMBL:BX842577 GO:GO:0003887 PIR:F70760
RefSeq:NP_216053.2 RefSeq:NP_336041.2 RefSeq:YP_006514925.1
ProteinModelPortal:P63985 SMR:P63985
EnsemblBacteria:EBMYCT00000000713 EnsemblBacteria:EBMYCT00000071148
GeneID:13320135 GeneID:886414 GeneID:924358 KEGG:mtc:MT1589
KEGG:mtu:Rv1537 KEGG:mtv:RVBD_1537 PATRIC:18125261
TubercuList:Rv1537 eggNOG:COG0389 HOGENOM:HOG000082707 KO:K02346
OMA:LKKADMS ProtClustDB:PRK03348 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 Uniprot:P63985
Length = 468
Score = 166 (63.5 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 64/262 (24%), Positives = 111/262 (42%)
Query: 4 SLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPN 63
S DEA+ + ++ E LR V +E GL S G + +AK+ S + KP+
Sbjct: 103 SFDEAFAEPPQLAGAVAEDVETFCERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPD 162
Query: 64 GQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSH 123
G V+ + + +S LP+R++ GIG V E L + GI T ++ A
Sbjct: 163 GIRVVRHAEEQAL--LSGLPVRRLWGIGPVAEEKLHRL-GIETIGQLAALSDAEAANILG 219
Query: 124 STADFFLS-VGLGLGSTNTPQARFRKSISSERTFSVT-EDKALLYRKLAEIAEMLSADMQ 181
+T L + G+ + K IS+E TF+V L+ + IAE +
Sbjct: 220 ATIGPALHRLARGIDDRPVVERAEAKQISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLL 279
Query: 182 KEXXXXXXXXXXXXXASFEVRTRAVTLQKYISSSEDILKHASVLLKAELPVS-LRLIGLR 240
++ + TR+ T+ + + + A LL L + +RL+G+
Sbjct: 280 RDGRGARTITVKLKKSDMSTLTRSATMPYPTTDAGALFTVARRLLPDPLQIGPIRLLGVG 339
Query: 241 ---VTQFNEDKVRAPSDPTQKT 259
++ ++ + A SD TQ+T
Sbjct: 340 FSGLSDIRQESLFADSDLTQET 361
>ASPGD|ASPL0000012133 [details] [associations]
symbol:AN3909 species:162425 "Emericella nidulans"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017956 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573
PROSITE:PS50173 SMART:SM00384 InterPro:IPR001357 GO:GO:0000287
GO:GO:0003684 GO:GO:0006281 EMBL:BN001302 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 EMBL:AACD01000064 GO:GO:0003887
eggNOG:COG0389 Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 InterPro:IPR025527 Pfam:PF14377 KO:K03515
OrthoDB:EOG49PF6V RefSeq:XP_661513.1 ProteinModelPortal:Q5B6C1
STRING:Q5B6C1 EnsemblFungi:CADANIAT00004788 GeneID:2873330
KEGG:ani:AN3909.2 HOGENOM:HOG000216225 OMA:SAEVNWG Uniprot:Q5B6C1
Length = 1139
Score = 171 (65.3 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 77/278 (27%), Positives = 124/278 (44%)
Query: 2 AASLDEAYLDITEVCRERGIS---GI-------------EIAEELRTSVYEEAGLTCSAG 45
+ S+DEA +DIT +C E G S G+ E+AE+LR ++ E G S G
Sbjct: 437 SVSIDEALVDITTICLEAGGSEGKGVSEGSIYREQAKADEVAEQLRAAIKRETGCAVSVG 496
Query: 46 VAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGIN 105
+ N L AKV KP GQF L D AV+ FI LP++ + G+G L D+ G+
Sbjct: 497 IGGNILQAKVALRKAKPAGQFQLKPD--AVLDFIGELPVQNLPGVGYSLSAKLEDL-GVK 553
Query: 106 TCEEMLQKG-SLLCAVFSHSTADFFLSVGLGLGSTNTPQARFRKSISSERTFS---VTED 161
+++ L + T G+ T RKS+S+E + VT+D
Sbjct: 554 IVKDIRDLSREKLSSSLGPKTGAKLADYARGIDRTEVGNEVTRKSVSAEVNWGIRFVTQD 613
Query: 162 KAL---------LYRKLAEI---AEMLSAD-MQKEXXXXXXXXXXXXXASFEVRTRAVTL 208
+A L+R+L E + L+ M++ +V ++V L
Sbjct: 614 QAEDFMRSLCEELHRRLVENLMKGQQLTLKVMRRALDAPLEAVKHLGHGKCDVFNKSVIL 673
Query: 209 QKYISSSEDIL-KHASVLLK--AELPVSLRLIGLRVTQ 243
+++ D+L K A +L+ A P LR +G+++T+
Sbjct: 674 G-IATNAADVLGKEAIAMLRSLAISPGDLRGLGVQMTK 710
>UNIPROTKB|E2RPL9 [details] [associations]
symbol:REV1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042276 "error-prone translesion synthesis"
evidence=IEA] [GO:0017125 "deoxycytidyl transferase activity"
evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0000287
"magnesium ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 GO:GO:0009411 GO:GO:0000287
GO:GO:0003684 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
GO:GO:0003887 GO:GO:0042276 Gene3D:3.30.1490.100 SUPFAM:SSF100879
GO:GO:0017125 GeneTree:ENSGT00530000062942 KO:K03515 CTD:51455
OMA:YRFCRGL EMBL:AAEX03007444 RefSeq:XP_538458.3
Ensembl:ENSCAFT00000003562 GeneID:481337 KEGG:cfa:481337
Uniprot:E2RPL9
Length = 1253
Score = 170 (64.9 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 76/286 (26%), Positives = 119/286 (41%)
Query: 2 AASLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINK 61
A S DEA +DITE+ E ++ E A +RT + ++ S G+ N LLA++ + K
Sbjct: 566 AVSCDEALVDITEILAETRLTPDEFANAVRTEIKDQTKCAASVGIGSNILLARMATRKAK 625
Query: 62 PNGQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEM-LQKGSLLCAV 120
P+GQ+ L + V FI + + G+G+ E L + GI TC ++ + L
Sbjct: 626 PDGQYHLKPEE--VDDFIRGQLVSNLPGVGRSMESKLNSL-GIKTCGDLQYMTMAKLQKE 682
Query: 121 FSHSTADFFLSVGLGLGSTNTPQARFRKSISSERTFSV--TEDK---ALLYRKLAEIAEM 175
F T GL + RKSIS+E + + T+ K A L EI
Sbjct: 683 FGPKTGQMLYRFCRGLDDRPVRTEKERKSISAEINYGIRFTQPKEAEAFLLNLSEEIQRR 742
Query: 176 LSADMQKEXXXXXXXXXXXXXASFEVR-----------TRAVTLQKYISSSEDILKHA-S 223
L A K A E TR VTL + S++ I K +
Sbjct: 743 LEAAHVKGKRLTLKVMVRKSGAPVETAKFGGHGICDNITRTVTLDQATDSAKIIGKATLN 802
Query: 224 VLLKAELPVS-LRLIGLRVTQFNEDKVRAPSDPTQKTLTNFMTSGH 268
+ +L +S +R +G+ V Q + P++ ++ SGH
Sbjct: 803 MFHTMKLNISDMRGVGIHVNQLVPTNPNPSACPSRPSVQ----SGH 844
>UNIPROTKB|F1RRJ6 [details] [associations]
symbol:POLH "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0010225 "response to UV-C" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0006290 "pyrimidine
dimer repair" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IEA] [GO:0000731 "DNA synthesis
involved in DNA repair" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0005737 GO:GO:0003684 GO:GO:0010225
GO:GO:0000731 GO:GO:0006301 GO:GO:0003887 GO:GO:0006290
Gene3D:3.30.1490.100 SUPFAM:SSF100879 KO:K03509 CTD:5429
OMA:SPPLTML InterPro:IPR017061 PIRSF:PIRSF036603
GeneTree:ENSGT00530000062942 EMBL:CR974460 RefSeq:XP_003356678.1
UniGene:Ssc.83954 Ensembl:ENSSSCT00000001879 GeneID:100153104
KEGG:ssc:100153104 Uniprot:F1RRJ6
Length = 698
Score = 133 (51.9 bits), Expect = 8.2e-09, Sum P(3) = 8.2e-09
Identities = 45/166 (27%), Positives = 82/166 (49%)
Query: 23 GIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSL 82
G I EE+R ++ + GL CSAG++ N++LAK+ ++KPN Q ++ +V S +
Sbjct: 193 GAVIVEEMRAAIERQTGLQCSAGISHNKVLAKLACALHKPNRQTLVSLG--SVPQVFSQM 250
Query: 83 PIRKIGGIG-KVTEHILRDVFGINTCEEMLQ-KGSLLCAVFSHSTADFFLSVGLGLGSTN 140
PI K+ +G K+ I+ ++ GI E+ Q S L + F + ++ G+
Sbjct: 251 PISKVRHLGGKLGASII-EILGIEYMGELTQFTESQLQSHFGEKNGSWLYAMCRGIEHEP 309
Query: 141 TPQARFRKSISSERTFS-----VTEDKALLYR-KLA-EIAEMLSAD 179
+ K++ + F VT ++ + +LA E+ E L+ D
Sbjct: 310 VRPRQVTKTLGCGKNFPGKTALVTREQVQWWLLQLAQELEERLTKD 355
Score = 77 (32.2 bits), Expect = 8.2e-09, Sum P(3) = 8.2e-09
Identities = 21/70 (30%), Positives = 31/70 (44%)
Query: 392 DDYKCSLCGTEMPPSFIEERQEHSDFHLAERLQKE----ESGSDLRILTHRERCVRTQRD 447
D C CG+ +P + E EHSD+H A LQK S + + + R +
Sbjct: 616 DQVLCEKCGSLVP---VWETPEHSDYHFALELQKSFLQPHSSTSQAVPARSPQSKRNPKS 672
Query: 448 HIASHRKRKK 457
+AS KR +
Sbjct: 673 PLASSHKRPR 682
Score = 43 (20.2 bits), Expect = 8.2e-09, Sum P(3) = 8.2e-09
Identities = 16/69 (23%), Positives = 27/69 (39%)
Query: 253 SDPTQKTLTNFMTSGHASKKIVGDQNSL---GSDINDDCLIDDKETSVSLDVSETNNYEF 309
+ P++ +L F TS + Q +L +ND + + S Y
Sbjct: 509 NSPSKPSLP-FQTSSTTGSEPFFKQKTLLLKQKQLNDPSVFFPPQKPQSSPKELPTEYPD 567
Query: 310 GDPVCDNSL 318
G P C+N+L
Sbjct: 568 GGPACENAL 576
>UNIPROTKB|J3KTN3 [details] [associations]
symbol:POLI "DNA polymerase iota" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] InterPro:IPR001126
InterPro:IPR017963 Pfam:PF00817 PROSITE:PS50173 GO:GO:0003684
GO:GO:0006281 GO:GO:0003887 EMBL:AC093462 HGNC:HGNC:9182
ChiTaRS:POLI Ensembl:ENST00000583136 Uniprot:J3KTN3
Length = 222
Score = 148 (57.2 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 40/102 (39%), Positives = 61/102 (59%)
Query: 10 LDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLP 69
+++ +V R + G +IA E+R ++Y + GLT AGVA N+LLAK+ S + KPN Q VL
Sbjct: 120 INLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLL 179
Query: 70 NDRMAVMTFISSLP-IRKIGGIGKVTEHILRDVFGINTCEEM 110
+ + I SL I++I GIG T L + GIN+ ++
Sbjct: 180 PE--SCQHLIHSLNHIKEIPGIGYKTAKCL-EALGINSVRDL 218
Score = 37 (18.1 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 6 DEAYLDITEVCRER 19
DE ++D+TE+ +R
Sbjct: 83 DENFVDLTEMVEKR 96
>ASPGD|ASPL0000072145 [details] [associations]
symbol:AN4678 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0019985 "translesion synthesis"
evidence=IEA] [GO:0034087 "establishment of mitotic sister
chromatid cohesion" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0003684 GO:GO:0006281 EMBL:BN001303
EMBL:AACD01000080 GO:GO:0003887 eggNOG:COG0389 Gene3D:3.30.1490.100
SUPFAM:SSF100879 KO:K03509 OrthoDB:EOG4M0J8V InterPro:IPR017061
PIRSF:PIRSF036603 RefSeq:XP_662282.1 ProteinModelPortal:Q5B452
STRING:Q5B452 EnsemblFungi:CADANIAT00005754 GeneID:2872476
KEGG:ani:AN4678.2 HOGENOM:HOG000173699 OMA:DDPDWDD Uniprot:Q5B452
Length = 674
Score = 153 (58.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 60/206 (29%), Positives = 98/206 (47%)
Query: 23 GIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSL 82
G EI +RT+V+ TCSAG+A N+++AK+ S NKPN Q V+ N A+ F+S
Sbjct: 263 GAEIVRSVRTAVWNSLSYTCSAGIAKNKMMAKLGSATNKPNKQTVVRN--RAIQNFLSGF 320
Query: 83 PIRKIGGIG-KVTEHILRDVFGINTCEEMLQKGSL--LCAVFSHSTADFFLSVGLGLGST 139
KI +G K+ + + +FG E+L K SL A + TA + + G +
Sbjct: 321 KFTKIRMLGGKLGDQVTA-MFGTEQISELL-KVSLEQFRAKLNDDTAVWLYGIIRGEDKS 378
Query: 140 NT-PQARFRKSISSERTF--SV-TEDKA--LLYRKLAEIAEMLSADMQKEXXXXXXXXXX 193
P+ + KS+ S ++F S+ T D+A L+ A+I L + E
Sbjct: 379 EVNPRTQI-KSMLSAKSFRPSINTLDQADKWLHIFAADIYGRLVEEGVLEHKRRPKTIAL 437
Query: 194 XXXASFEVRTRAVTLQKYISSSEDIL 219
+V++R + + + ED+L
Sbjct: 438 HHRQGAQVKSRQLPIPGSATIDEDLL 463
Score = 56 (24.8 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 16/60 (26%), Positives = 29/60 (48%)
Query: 371 DITPDNKV---GTSSNQKDQFIWLDDYKCSLCGTEMPPSFIEERQEHSDFHLAERLQKEE 427
DI DN +S+ + + + ++C CG + E EH+D+H A+ L+ +E
Sbjct: 575 DINVDNAQLDDHVASDGEIEQVHSKSFRCPRCGRYINCG---EEDEHNDWHFAKDLETQE 631
>UNIPROTKB|F1P5H4 [details] [associations]
symbol:REV1 "DNA repair protein REV1" species:9031 "Gallus
gallus" [GO:0000287 "magnesium ion binding" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0009411
"response to UV" evidence=IEA] [GO:0017125 "deoxycytidyl
transferase activity" evidence=IEA] [GO:0042276 "error-prone
translesion synthesis" evidence=IEA] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 GO:GO:0009411 GO:GO:0000287
GO:GO:0003684 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
GO:GO:0003887 GO:GO:0042276 Gene3D:3.30.1490.100 SUPFAM:SSF100879
GO:GO:0017125 GeneTree:ENSGT00530000062942 OMA:YRFCRGL
EMBL:AADN02017696 EMBL:AADN02017697 IPI:IPI01017381
Ensembl:ENSGALT00000027069 Uniprot:F1P5H4
Length = 1255
Score = 166 (63.5 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 57/184 (30%), Positives = 85/184 (46%)
Query: 2 AASLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINK 61
A S DEA +DITE+ E ++ E+A +R + + T S G+ N LLA++ + K
Sbjct: 577 AVSCDEALVDITEILTETRLTPDELANAIRDEIKAQTKCTASVGMGSNILLARMATRKAK 636
Query: 62 PNGQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSL--LCA 119
P+GQ+ L + V FI + + G+G+ E L + GI TC + LQ S+ L
Sbjct: 637 PDGQYHLKPEE--VDDFIRGQLVTNLPGVGRSMESKLASL-GIRTCGD-LQCASMSKLQK 692
Query: 120 VFSHSTADFFLSVGLGLGSTNTPQARFRKSISSERTFSV--TEDK---ALLYRKLAEIAE 174
F T GL + RKS+S+E + + T+ K A L EI
Sbjct: 693 EFGPKTGQMLYRFCRGLDDRPVRTEKERKSVSAEINYGIRFTQPKEAEAFLLSLSEEIQR 752
Query: 175 MLSA 178
L A
Sbjct: 753 RLEA 756
>UNIPROTKB|Q4KWZ7 [details] [associations]
symbol:REV1 "DNA repair protein REV1" species:9031 "Gallus
gallus" [GO:0000287 "magnesium ion binding" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS] [GO:0019985
"translesion synthesis" evidence=TAS] [GO:0006302 "double-strand
break repair" evidence=IMP] [GO:0002206 "gene conversion of
immunoglobulin genes" evidence=IMP] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 GO:GO:0005654 GO:GO:0000287
GO:GO:0003684 GO:GO:0006260 GO:GO:0006302 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 Reactome:REACT_115612 GO:GO:0003887
GO:GO:0019985 eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879
KO:K03515 EMBL:AY675169 IPI:IPI00571721 RefSeq:NP_001025982.2
UniGene:Gga.24037 ProteinModelPortal:Q4KWZ7 SMR:Q4KWZ7
STRING:Q4KWZ7 GeneID:418703 KEGG:gga:418703 CTD:51455
HOGENOM:HOG000154094 HOVERGEN:HBG054140 InParanoid:Q4KWZ7
OrthoDB:EOG4GF3DF NextBio:20821851 GO:GO:0002206 Uniprot:Q4KWZ7
Length = 1255
Score = 166 (63.5 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 57/184 (30%), Positives = 85/184 (46%)
Query: 2 AASLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINK 61
A S DEA +DITE+ E ++ E+A +R + + T S G+ N LLA++ + K
Sbjct: 577 AVSCDEALVDITEILTETRLTPDELANAIRDEIKAQTKCTASVGMGSNILLARMATRKAK 636
Query: 62 PNGQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSL--LCA 119
P+GQ+ L + V FI + + G+G+ E L + GI TC + LQ S+ L
Sbjct: 637 PDGQYHLKPEE--VDDFIRGQLVTNLPGVGRSMESKLASL-GIRTCGD-LQCASMSKLQK 692
Query: 120 VFSHSTADFFLSVGLGLGSTNTPQARFRKSISSERTFSV--TEDK---ALLYRKLAEIAE 174
F T GL + RKS+S+E + + T+ K A L EI
Sbjct: 693 EFGPKTGQMLYRFCRGLDDRPVRTEKERKSVSAEINYGIRFTQPKEAEAFLLSLSEEIQR 752
Query: 175 MLSA 178
L A
Sbjct: 753 RLEA 756
>TAIR|locus:2156319 [details] [associations]
symbol:REV1 species:3702 "Arabidopsis thaliana"
[GO:0000287 "magnesium ion binding" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IEA;IDA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006281 "DNA
repair" evidence=IEA;ISS] [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0010224 "response to UV-B"
evidence=IMP] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0050665 "hydrogen peroxide
biosynthetic process" evidence=RCA] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000287 GO:GO:0003684 GO:GO:0006260
GO:GO:0006281 GO:GO:0006974 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 GO:GO:0010224 GO:GO:0003887 eggNOG:COG0389
Gene3D:3.30.1490.100 SUPFAM:SSF100879 EMBL:AB016874 EMBL:AC002342
EMBL:AB187523 EMBL:EF016093 EMBL:EF016094 EMBL:EF016095
EMBL:EF016096 EMBL:EF016097 EMBL:EF016098 EMBL:AY080825
IPI:IPI00517369 IPI:IPI00554422 IPI:IPI00837466 IPI:IPI00891315
RefSeq:NP_001119373.1 RefSeq:NP_199288.4 UniGene:At.30056
ProteinModelPortal:A3EWL3 SMR:A3EWL3 STRING:A3EWL3 PRIDE:A3EWL3
EnsemblPlants:AT5G44750.2 GeneID:834504 KEGG:ath:AT5G44750
TAIR:At5g44750 HOGENOM:HOG000246421 KO:K03515 OMA:TIPYDFD
PhylomeDB:A3EWL3 ProtClustDB:CLSN2681660 Genevestigator:A3EWL3
Uniprot:A3EWL3
Length = 1105
Score = 152 (58.6 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 44/160 (27%), Positives = 78/160 (48%)
Query: 2 AASLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINK 61
A S DEA+LD++++ + +A +R + E G + SAG+ L+A++ + + K
Sbjct: 472 ALSCDEAFLDVSDLS---DVETEVLASTIRNEILETTGCSASAGIGGTMLMARLATRVAK 528
Query: 62 PNGQFVLPNDRMAVMTFISSLPIRKIGGIGKVT-EHILRDVFGINTCEEM--LQKGSLLC 118
P GQ + ++ V F+ LP+ + G+G V E +++ I TC ++ + K SL
Sbjct: 529 PAGQLYISAEK--VEEFLDQLPVGTLPGVGSVLKEKLVKQ--NIQTCGQLRLISKDSLQ- 583
Query: 119 AVFSHSTADFFLSVGLGLGSTNTPQARFRKSISSERTFSV 158
F T + S GL + + KSI +E + V
Sbjct: 584 KDFGVKTGEMLWSYSRGLDLRSVTAVQESKSIGAEVNWGV 623
Score = 61 (26.5 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 23/92 (25%), Positives = 47/92 (51%)
Query: 234 LRLIGLRVTQFNEDKVRAPSDPTQKTLTNFMTSGHASKKIVGDQNSLGSDI--NDDCL-- 289
+R +GL+V++ + PS+ +TL ++++S A +I D N + + N DC
Sbjct: 720 VRGVGLQVSKLDSAD---PSNKGSRTLKSWLSSAPAVVQIEQDDNVFAAKVRENSDCNRP 776
Query: 290 IDDKETSVSLDVSETNNYEFGDPVCDNSLPDL 321
+ + + SE ++ + GD ++SLP +
Sbjct: 777 VTGGVSRLRESNSEESSIQSGDT--NSSLPPM 806
>RGD|1309893 [details] [associations]
symbol:Polh "polymerase (DNA directed), eta" species:10116
"Rattus norvegicus" [GO:0000731 "DNA synthesis involved in DNA
repair" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006290 "pyrimidine dimer repair"
evidence=IEA;ISO] [GO:0006301 "postreplication repair"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0010225 "response to UV-C" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
RGD:1309893 GO:GO:0005634 GO:GO:0005737 GO:GO:0003684 GO:GO:0010225
GO:GO:0000731 GO:GO:0006301 GO:GO:0003887 GO:GO:0006290
EMBL:CH473987 Gene3D:3.30.1490.100 SUPFAM:SSF100879 KO:K03509
CTD:5429 OMA:SPPLTML OrthoDB:EOG4RBQJ8 InterPro:IPR017061
PIRSF:PIRSF036603 GeneTree:ENSGT00530000062942 IPI:IPI00194322
RefSeq:NP_001101674.1 UniGene:Rn.53711 Ensembl:ENSRNOT00000026049
GeneID:316235 KEGG:rno:316235 UCSC:RGD:1309893 NextBio:670614
Uniprot:D4ADZ0
Length = 689
Score = 149 (57.5 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 38/136 (27%), Positives = 69/136 (50%)
Query: 23 GIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSL 82
G I EE+R ++ + G CSAG++ N++LAK+ +NKPN Q ++ + +V S +
Sbjct: 192 GAVIVEEMRAAIERKTGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHG--SVPQLFSQM 249
Query: 83 PIRKIGGIG-KVTEHILRDVFGINTCEEMLQ-KGSLLCAVFSHSTADFFLSVGLGLGSTN 140
PIRKI +G K+ ++ DV G+ ++ Q + L + F + ++ G+
Sbjct: 250 PIRKIRSLGGKLGASVI-DVLGVEYMGDLTQFTEAQLQSHFGEKNGSWLYAMCRGIEHEP 308
Query: 141 TPQARFRKSISSERTF 156
+ K+I + F
Sbjct: 309 VKPRQLPKTIGCSKNF 324
Score = 57 (25.1 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 371 DITPDNKVGTSSNQKDQFIWLDDYKCSLCGTEMPPSFIEERQEHSDFHLAERLQK 425
++ ++ + +S + Q D C C + +P + + EH D+H A LQK
Sbjct: 587 NVAGNSSLAYNSQEMTQRAAEDQVLCEKCDSLVP---VWDMPEHLDYHFALELQK 638
>MGI|MGI:1891457 [details] [associations]
symbol:Polh "polymerase (DNA directed), eta (RAD 30
related)" species:10090 "Mus musculus" [GO:0000731 "DNA synthesis
involved in DNA repair" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006290
"pyrimidine dimer repair" evidence=IDA] [GO:0006301
"postreplication repair" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0010225 "response to UV-C"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 MGI:MGI:1891457 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 GO:GO:0010225
GO:GO:0000731 GO:GO:0006301 GO:GO:0003887 GO:GO:0006290
eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879 KO:K03509
CTD:5429 HOGENOM:HOG000115605 HOVERGEN:HBG053633 OMA:SPPLTML
OrthoDB:EOG4RBQJ8 InterPro:IPR017061 PIRSF:PIRSF036603
EMBL:AB027128 EMBL:AB037184 EMBL:AK036296 IPI:IPI00122040
RefSeq:NP_109640.1 UniGene:Mm.311585 ProteinModelPortal:Q9JJN0
SMR:Q9JJN0 IntAct:Q9JJN0 STRING:Q9JJN0 PhosphoSite:Q9JJN0
PRIDE:Q9JJN0 Ensembl:ENSMUST00000024749 GeneID:80905 KEGG:mmu:80905
UCSC:uc008crx.1 GeneTree:ENSGT00530000062942 InParanoid:Q9JJN0
NextBio:350254 Bgee:Q9JJN0 CleanEx:MM_POLH Genevestigator:Q9JJN0
GermOnline:ENSMUSG00000023953 Uniprot:Q9JJN0
Length = 694
Score = 149 (57.5 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 39/136 (28%), Positives = 69/136 (50%)
Query: 23 GIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSL 82
G I EE+R ++ + G CSAG++ N++LAK+ +NKPN Q ++ + +V S +
Sbjct: 192 GAMIVEEMRAAIESKTGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHG--SVPQLFSQM 249
Query: 83 PIRKIGGIG-KVTEHILRDVFGINTCEEMLQ-KGSLLCAVFSHSTADFFLSVGLGLGSTN 140
PIRKI +G K+ ++ +V GI ++ Q S L + F + ++ G+
Sbjct: 250 PIRKIRSLGGKLGASVI-EVLGIEYMGDLTQFTESQLQSHFGEKNGSWLYAMCRGIEHDP 308
Query: 141 TPQARFRKSISSERTF 156
+ K+I + F
Sbjct: 309 VKPRQLPKTIGCSKNF 324
Score = 57 (25.1 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 392 DDYKCSLCGTEMPPSFIEERQEHSDFHLAERLQK 425
D C C + +P + + EH+D+H A LQK
Sbjct: 612 DQVLCEKCDSLVP---VWDMPEHTDYHFALELQK 642
>TIGR_CMR|SPO_3280 [details] [associations]
symbol:SPO_3280 "DNA polymerase IV, putative"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=ISS] [GO:0006260 "DNA
replication" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0000287 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003684 GO:GO:0006281 GO:GO:0006261
GO:GO:0003887 HOGENOM:HOG000082707 KO:K02346 Gene3D:3.30.1490.100
SUPFAM:SSF100879 OMA:PALCRDC ProtClustDB:PRK02794
RefSeq:YP_168477.1 ProteinModelPortal:Q5LND1 GeneID:3193147
KEGG:sil:SPO3280 PATRIC:23380003 Uniprot:Q5LND1
Length = 420
Score = 156 (60.0 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 61/224 (27%), Positives = 97/224 (43%)
Query: 4 SLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPN 63
SLDEA++D++ R G + L + +E G+T S G++ N+ LAKV SD+ KP
Sbjct: 135 SLDEAFMDLSGTQRLHGHPPAVMLARLVKRMKDELGVTGSIGLSHNKFLAKVASDLEKPR 194
Query: 64 GQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQ-KGSLLCAVFS 122
G V+ R F+ P+R I GIG + L GI T ++L+ + L A F
Sbjct: 195 GFSVI--GRAETAEFLRDKPVRLIWGIGPAAQESLERA-GIRTFTDLLRWEQEALVARFG 251
Query: 123 HSTADFFLSVGLGLGSTNTPQARFRKSISSERTF-SVTEDKALLYRKLAEIAEMLSADMQ 181
+ + G KSIS+E TF T D +L + +AE ++ +
Sbjct: 252 -AMGQRLWHLARGEDRRRVSAHDPIKSISNETTFFEDTGDADVLDGHIWRMAEKVADRAK 310
Query: 182 KEXXXXXXXXXXXXXASFEVRTRAVTLQKYISSSEDILKHASVL 225
A+ V +R +L+ ++ I + A L
Sbjct: 311 ARGLAGRVVTLKLKRANHRVLSRQQSLRDPTQMADRIYRTARAL 354
>MGI|MGI:1929074 [details] [associations]
symbol:Rev1 "REV1 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000287 "magnesium ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0009411 "response to UV" evidence=ISO]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0017125
"deoxycytidyl transferase activity" evidence=IDA] [GO:0042276
"error-prone translesion synthesis" evidence=IDA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 MGI:MGI:1929074 Pfam:PF00533 GO:GO:0005634
GO:GO:0009411 GO:GO:0000287 GO:GO:0003684 GO:GO:0006260
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0003887
GO:GO:0042276 eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879
PDB:4FJO PDBsum:4FJO GO:GO:0017125 GeneTree:ENSGT00530000062942
PDB:2LSJ PDBsum:2LSJ KO:K03515 CTD:51455 HOGENOM:HOG000154094
HOVERGEN:HBG054140 OrthoDB:EOG4GF3DF OMA:YRFCRGL ChiTaRS:REV1
EMBL:AB057418 EMBL:AF179302 EMBL:BC058093 IPI:IPI00396706
RefSeq:NP_062516.2 UniGene:Mm.389103 PDB:2LSG PDBsum:2LSG
ProteinModelPortal:Q920Q2 SMR:Q920Q2 DIP:DIP-41772N IntAct:Q920Q2
STRING:Q920Q2 PhosphoSite:Q920Q2 PRIDE:Q920Q2
Ensembl:ENSMUST00000027251 GeneID:56210 KEGG:mmu:56210
UCSC:uc007asp.1 InParanoid:Q920Q2 NextBio:312050 Bgee:Q920Q2
CleanEx:MM_REV1 Genevestigator:Q920Q2 GermOnline:ENSMUSG00000026082
Uniprot:Q920Q2
Length = 1249
Score = 162 (62.1 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 54/183 (29%), Positives = 82/183 (44%)
Query: 2 AASLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINK 61
A S DEA +D+T++ E +S E A LR + ++ S G+ N LLA++ + K
Sbjct: 564 AVSCDEALIDVTDILAETKLSPEEFAAALRIEIKDKTKCAASVGIGSNILLARMATKKAK 623
Query: 62 PNGQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEM-LQKGSLLCAV 120
P+GQ+ L D V FI + + G+G+ E L + GI TC ++ + L
Sbjct: 624 PDGQYHLQPDE--VDDFIRGQLVTNLPGVGRSMESKLASL-GIKTCGDLQCLTMAKLQKE 680
Query: 121 FSHSTADFFLSVGLGLGSTNTPQARFRKSISSERTFSV--TEDK---ALLYRKLAEIAEM 175
F T GL + RKS+S+E + + T+ K A L EI
Sbjct: 681 FGPKTGQMLYRFCRGLDDRPVRTEKERKSVSAEINYGIRFTQPKEAEAFLLSLSEEIQRR 740
Query: 176 LSA 178
L A
Sbjct: 741 LEA 743
>RGD|1306715 [details] [associations]
symbol:Rev1 "REV1, polymerase (DNA directed)" species:10116
"Rattus norvegicus" [GO:0000287 "magnesium ion binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA;ISO] [GO:0017125
"deoxycytidyl transferase activity" evidence=IEA;ISO] [GO:0042276
"error-prone translesion synthesis" evidence=IEA;ISO]
InterPro:IPR001126 InterPro:IPR012112 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573
PROSITE:PS50173 InterPro:IPR001357 Pfam:PF00533 RGD:1306715
GO:GO:0000287 GO:GO:0003684 GO:GO:0006281 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 EMBL:CH473965 GO:GO:0003887
Gene3D:3.30.1490.100 SUPFAM:SSF100879 GeneTree:ENSGT00530000062942
KO:K03515 CTD:51455 OrthoDB:EOG4GF3DF IPI:IPI00951348
RefSeq:NP_001101683.1 UniGene:Rn.94641 Ensembl:ENSRNOT00000067197
GeneID:316344 KEGG:rno:316344 UCSC:RGD:1306715 NextBio:670745
Uniprot:D3ZRU9
Length = 1119
Score = 160 (61.4 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 53/183 (28%), Positives = 80/183 (43%)
Query: 2 AASLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINK 61
A S DEA +D+T++ E +S E A LR + + S G+ N LLA++ + K
Sbjct: 564 AVSCDEALIDVTDILAETKLSPEEFAAALRMEIKNKTQCAASVGIGSNILLARMATKKAK 623
Query: 62 PNGQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEM-LQKGSLLCAV 120
P+GQ+ L D V FI + + G+G+ E L + GI TC ++ + L
Sbjct: 624 PDGQYHLQPDE--VDDFIRGQLVTSLPGVGRSMESKLASL-GIKTCGDLQCLTMAKLQKE 680
Query: 121 FSHSTADFFLSVGLGLGSTNTPQARFRKSISSERTFSVT-----EDKALLYRKLAEIAEM 175
F T GL + RKS+S+E + + E +A L EI
Sbjct: 681 FGPKTGQMLYRFCRGLDDRPVRTEKERKSVSAEINYGIRFTQPREAEAFLLSLSGEIQSR 740
Query: 176 LSA 178
L A
Sbjct: 741 LEA 743
>UNIPROTKB|F1N787 [details] [associations]
symbol:REV1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042276 "error-prone translesion synthesis"
evidence=IEA] [GO:0017125 "deoxycytidyl transferase activity"
evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0000287
"magnesium ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 GO:GO:0009411 GO:GO:0000287 GO:GO:0003684
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0003887
GO:GO:0042276 Gene3D:3.30.1490.100 SUPFAM:SSF100879 GO:GO:0017125
GeneTree:ENSGT00530000062942 OMA:YRFCRGL EMBL:DAAA02030163
EMBL:DAAA02030164 EMBL:DAAA02030165 EMBL:DAAA02030166
EMBL:DAAA02030167 EMBL:DAAA02030168 IPI:IPI00731687
Ensembl:ENSBTAT00000061518 Uniprot:F1N787
Length = 1202
Score = 159 (61.0 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 53/183 (28%), Positives = 81/183 (44%)
Query: 2 AASLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINK 61
A S DEA +DITE+ E ++ E A +R + ++ S G+ N LLA++ + K
Sbjct: 515 AVSCDEALVDITEILAETRLTPDEFANAVRMEIKDQTKCAASVGIGSNILLARMATRKAK 574
Query: 62 PNGQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEM-LQKGSLLCAV 120
P+GQ+ L + V FI + + G+G+ E L + GI TC ++ + L
Sbjct: 575 PDGQYHLKPEE--VDDFIRGQLVTNLPGVGRSMESKLMSL-GIRTCGDLQYMTMAKLQKE 631
Query: 121 FSHSTADFFLSVGLGLGSTNTPQARFRKSISSERTFSVT-----EDKALLYRKLAEIAEM 175
F T GL + RKSIS+E + + E +A L EI
Sbjct: 632 FGSKTGQMLYRFCRGLDDRPVRTEKERKSISAEINYGIRFSQPKEAEAFLLSLSEEIQRR 691
Query: 176 LSA 178
L A
Sbjct: 692 LEA 694
>UNIPROTKB|Q9UBZ9 [details] [associations]
symbol:REV1 "DNA repair protein REV1" species:9606 "Homo
sapiens" [GO:0000287 "magnesium ion binding" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0017125 "deoxycytidyl transferase
activity" evidence=IEA] [GO:0042276 "error-prone translesion
synthesis" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009411 "response to UV" evidence=IDA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006281 "DNA repair"
evidence=TAS] Reactome:REACT_216 InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 GO:GO:0009411 GO:GO:0005654
GO:GO:0000287 GO:GO:0003684 GO:GO:0006260 EMBL:AC018690
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0003887
GO:GO:0042276 eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879
PDB:3VU7 PDBsum:3VU7 GO:GO:0017125 PDB:2LSK PDBsum:2LSK KO:K03515
CTD:51455 HOGENOM:HOG000154094 HOVERGEN:HBG054140 OrthoDB:EOG4GF3DF
EMBL:AF151538 EMBL:AF206019 EMBL:AB047646 EMBL:AF357886
EMBL:AK002087 EMBL:AJ131720 IPI:IPI00008816 IPI:IPI00552928
IPI:IPI00552936 RefSeq:NP_001032961.1 RefSeq:NP_057400.1
UniGene:Hs.443077 PDB:2EBW PDB:2LSY PDB:3GQC PDBsum:2EBW
PDBsum:2LSY PDBsum:3GQC ProteinModelPortal:Q9UBZ9 SMR:Q9UBZ9
MINT:MINT-140323 STRING:Q9UBZ9 PhosphoSite:Q9UBZ9 DMDM:59798439
PaxDb:Q9UBZ9 PRIDE:Q9UBZ9 Ensembl:ENST00000258428
Ensembl:ENST00000393445 GeneID:51455 KEGG:hsa:51455 UCSC:uc002tac.3
UCSC:uc002tad.3 UCSC:uc002tae.1 GeneCards:GC02M100016
HGNC:HGNC:14060 HPA:HPA044534 HPA:HPA051036 MIM:606134
neXtProt:NX_Q9UBZ9 PharmGKB:PA162401120 InParanoid:Q9UBZ9
OMA:YRFCRGL PhylomeDB:Q9UBZ9 ChiTaRS:REV1 EvolutionaryTrace:Q9UBZ9
GenomeRNAi:51455 NextBio:55069 ArrayExpress:Q9UBZ9 Bgee:Q9UBZ9
CleanEx:HS_REV1 Genevestigator:Q9UBZ9 GermOnline:ENSG00000135945
Uniprot:Q9UBZ9
Length = 1251
Score = 156 (60.0 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 54/187 (28%), Positives = 82/187 (43%)
Query: 2 AASLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINK 61
A S DEA +DITE+ E ++ E A +R + ++ S G+ N LLA++ + K
Sbjct: 566 AVSCDEALVDITEILAETKLTPDEFANAVRMEIKDQTKCAASVGIGSNILLARMATRKAK 625
Query: 62 PNGQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEM-LQKGSLLCAV 120
P+GQ+ L + V FI + + G+G E L + GI TC ++ + L
Sbjct: 626 PDGQYHLKPEE--VDDFIRGQLVTNLPGVGHSMESKLASL-GIKTCGDLQYMTMAKLQKE 682
Query: 121 FSHSTADFFLSVGLGLGSTNTPQARFRKSISSERTFSV--TEDK---ALLYRKLAEIAEM 175
F T GL + RKS+S+E + + T+ K A L EI
Sbjct: 683 FGPKTGQMLYRFCRGLDDRPVRTEKERKSVSAEINYGIRFTQPKEAEAFLLSLSEEIQRR 742
Query: 176 LSADMQK 182
L A K
Sbjct: 743 LEATGMK 749
>UNIPROTKB|F1STE9 [details] [associations]
symbol:REV1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042276 "error-prone translesion synthesis"
evidence=IEA] [GO:0017125 "deoxycytidyl transferase activity"
evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0000287
"magnesium ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 GO:GO:0009411 GO:GO:0000287
GO:GO:0003684 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
GO:GO:0003887 GO:GO:0042276 Gene3D:3.30.1490.100 SUPFAM:SSF100879
GO:GO:0017125 GeneTree:ENSGT00530000062942 OMA:YRFCRGL
EMBL:FP326722 EMBL:CU972417 EMBL:CU694748
Ensembl:ENSSSCT00000008958 Uniprot:F1STE9
Length = 1253
Score = 155 (59.6 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 45/158 (28%), Positives = 73/158 (46%)
Query: 2 AASLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINK 61
A S DEA +DITE+ E ++ E A +R + ++ S G+ N LLA++ + K
Sbjct: 565 AVSCDEALVDITEILAETRLTPDEFANAVRMEIKDQTKCAASVGIGSNILLARMATRKAK 624
Query: 62 PNGQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEM-LQKGSLLCAV 120
P+GQ+ L + V FI + + G+G+ E L + GI TC ++ + L
Sbjct: 625 PDGQYHLKPEE--VDDFIRGQLVTNLPGVGRSMESKLMSL-GIRTCGDLQYMTMAKLQKE 681
Query: 121 FSHSTADFFLSVGLGLGSTNTPQARFRKSISSERTFSV 158
F T GL + RKS+S+E + +
Sbjct: 682 FGPKTGQMLYRFCRGLDDRPVRTEKERKSVSAEINYGI 719
>UNIPROTKB|G5EH81 [details] [associations]
symbol:MGCH7_ch7g688 "Sister chromatid cohesion protein
Eso1" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0003684 GO:GO:0006281 EMBL:CM000230 EMBL:CM001237
GO:GO:0003887 Gene3D:3.30.1490.100 SUPFAM:SSF100879 KO:K03509
InterPro:IPR017061 PIRSF:PIRSF036603 RefSeq:XP_003720794.1
EnsemblFungi:MGG_02924T0 GeneID:2682477 KEGG:mgr:MGG_02924
Uniprot:G5EH81
Length = 668
Score = 132 (51.5 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 40/135 (29%), Positives = 68/135 (50%)
Query: 25 EIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSLPI 84
EI ++R +++ TCSAGVA N+LL+K+ S KPN Q V+ AV F+S
Sbjct: 248 EITRDIRQTIFTRLKYTCSAGVAGNKLLSKLGSAHKKPNQQTVIRG--RAVRKFLSDFKF 305
Query: 85 RKIGGIG-KVTEHILRDVFGINTCEEMLQK--GSLLCAVFSHSTADFFLSVGLGLGSTNT 141
KI +G K+ + ++ FG + ++L+ L + STA + + G+ ++
Sbjct: 306 TKIRNLGGKLGDQVVA-AFGTESVSDLLEVPLDQLKLRLGEESTALWVYNTIRGIDNSEV 364
Query: 142 PQARFRKSISSERTF 156
KS+ S ++F
Sbjct: 365 NSRTQIKSMLSAKSF 379
Score = 65 (27.9 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 409 EERQEHSDFHLAERLQKEESGSDLRILTHRE 439
EE Q+H D+HLA+ LQ EE T R+
Sbjct: 603 EELQDHLDWHLAKDLQDEEERGASAFATRRQ 633
>MGI|MGI:1347081 [details] [associations]
symbol:Poli "polymerase (DNA directed), iota" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IDA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 MGI:MGI:1347081 GO:GO:0005634 GO:GO:0046872
GO:GO:0003684 GO:GO:0006260 GO:GO:0006281 GO:GO:0003887
eggNOG:COG0389 Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 GeneTree:ENSGT00530000062942 CTD:11201
HOGENOM:HOG000234325 HOVERGEN:HBG053634 KO:K03510 OrthoDB:EOG46T310
EMBL:AF151691 EMBL:AY515316 EMBL:AY515317 EMBL:BC082278
IPI:IPI00553425 IPI:IPI00985545 RefSeq:NP_001129562.1
UniGene:Mm.244352 PDB:2KWU PDB:2KWV PDB:3AI4 PDBsum:2KWU
PDBsum:2KWV PDBsum:3AI4 ProteinModelPortal:Q6R3M4 SMR:Q6R3M4
IntAct:Q6R3M4 STRING:Q6R3M4 PhosphoSite:Q6R3M4 PRIDE:Q6R3M4
Ensembl:ENSMUST00000043286 Ensembl:ENSMUST00000161542 GeneID:26447
KEGG:mmu:26447 UCSC:uc008foi.2 UCSC:uc008fok.2 InParanoid:Q6R3M4
BindingDB:Q6R3M4 ChEMBL:CHEMBL5159 NextBio:304545 Bgee:Q6R3M4
CleanEx:MM_POLI Genevestigator:Q6R3M4 GermOnline:ENSMUSG00000038425
Uniprot:Q6R3M4
Length = 717
Score = 157 (60.3 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 41/102 (40%), Positives = 62/102 (60%)
Query: 10 LDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLP 69
+++ + R + G +IA E+R ++Y + GLT AGVAPN+LLAK+ S + KPN Q VL
Sbjct: 163 VNLHNIMHRRLVVGSQIAAEMREAMYNQLGLTGCAGVAPNKLLAKLVSGVFKPNQQTVLL 222
Query: 70 NDRMAVMTFISSLP-IRKIGGIGKVTEHILRDVFGINTCEEM 110
+ + I SL I++I GIG T L +V GIN+ ++
Sbjct: 223 PE--SCQHLIHSLNHIKEIPGIGYKTAKRL-EVLGINSVHDL 261
Score = 41 (19.5 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 12/50 (24%), Positives = 21/50 (42%)
Query: 415 SDFHLAERLQKEESGSDLRILTHRERCVRTQRDHIASHRKRKKQKLFEKE 464
S FH LQ E+ S R + ++ + SH+ + ++L E
Sbjct: 627 SGFHSFPNLQTEQLFSTHRTVDSHKQTATASHQGLESHQGLESRELDSAE 676
Score = 37 (18.1 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 6 DEAYLDITEVCRER 19
DE ++D+TE+ +R
Sbjct: 126 DENFVDLTEMVEKR 139
>UNIPROTKB|J3KRG0 [details] [associations]
symbol:POLI "DNA polymerase iota" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] InterPro:IPR001126
InterPro:IPR017963 Pfam:PF00817 PROSITE:PS50173 GO:GO:0003684
GO:GO:0006281 GO:GO:0003887 EMBL:AC093462 HGNC:HGNC:9182
ChiTaRS:POLI Ensembl:ENST00000580880 Uniprot:J3KRG0
Length = 145
Score = 124 (48.7 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 27/59 (45%), Positives = 40/59 (67%)
Query: 10 LDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVL 68
+++ +V R + G +IA E+R ++Y + GLT AGVA N+LLAK+ S + KPN Q VL
Sbjct: 85 INLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVL 143
>UNIPROTKB|F1NCM3 [details] [associations]
symbol:POLH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0000731
"DNA synthesis involved in DNA repair" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006290 "pyrimidine dimer repair" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0010225 "response to
UV-C" evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0005737 GO:GO:0003684 GO:GO:0010225
GO:GO:0000731 GO:GO:0006301 GO:GO:0003887 GO:GO:0006290
Gene3D:3.30.1490.100 SUPFAM:SSF100879 InterPro:IPR017061
PIRSF:PIRSF036603 GeneTree:ENSGT00530000062942 EMBL:AADN02011866
EMBL:AADN02011865 IPI:IPI00818532 Ensembl:ENSGALT00000038044
ArrayExpress:F1NCM3 Uniprot:F1NCM3
Length = 657
Score = 144 (55.7 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 37/135 (27%), Positives = 61/135 (45%)
Query: 23 GIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSL 82
G I EE+R +V + G CSAG++ N++LAK+ +NKPN Q L + R F S +
Sbjct: 184 GAVIVEEIRVAVEKATGFRCSAGISHNKMLAKLACGLNKPNRQ-TLVSSRSVPQLF-SQM 241
Query: 83 PIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSL-LCAVFSHSTADFFLSVGLGLGSTNT 141
P+ I +G + D+ G+ E+ + + L F T + + G+
Sbjct: 242 PVSSIRNLGGKLGVAITDILGVEYIGEVTKFSEMELQTHFGDKTGSWLYDLCRGIDDEPV 301
Query: 142 PQARFRKSISSERTF 156
+SI + F
Sbjct: 302 KNRHLPQSIGCSKNF 316
Score = 49 (22.3 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 392 DDYKCSLCGTEMPPSFIEERQEHSDFHLAERLQK 425
D C CG + E EH D+H A LQ+
Sbjct: 596 DQQCCEKCGQYV---LAWELPEHMDYHFAVELQR 626
>UNIPROTKB|F1PDA5 [details] [associations]
symbol:POLI "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0003684 GO:GO:0006281 GO:GO:0003887
Gene3D:3.30.1490.100 SUPFAM:SSF100879 GeneTree:ENSGT00530000062942
OMA:VFYELPE EMBL:AAEX03000145 Ensembl:ENSCAFT00000000242
Uniprot:F1PDA5
Length = 702
Score = 156 (60.0 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 51/172 (29%), Positives = 89/172 (51%)
Query: 9 YLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVL 68
Y+++ ++ R + G +IA E+R ++Y + GLT AGVA N+LLAK+ S + KPN Q VL
Sbjct: 148 YINLHDILHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVL 207
Query: 69 PNDRMAVMTFISSLP-IRKIGGIGKVTEHILRDVFGINTCEEMLQKGS-LLCAVFSHSTA 126
+ V+ I SL ++++ GIG T L + GI++ ++ S +L S A
Sbjct: 208 LPESSQVL--IQSLNHVKEMPGIGYKTAKRL-EALGISSVYDLQTFSSKILEKELGISVA 264
Query: 127 DFFLSVGLGLGSTNTPQARFRKSISSERTFSVTEDKALLYRKLAEI-AEMLS 177
+ G ++ + +S S E +F + + K+ E+ A +L+
Sbjct: 265 QRIQKLSFGEDNSPVTPSGPPQSFSEEDSFKKCSSEVEVKNKIEELLASLLN 316
Score = 37 (18.1 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 6 DEAYLDITEVCRER 19
DE ++D+TE+ +R
Sbjct: 112 DENFVDLTEMVEKR 125
>UNIPROTKB|F1NAG6 [details] [associations]
symbol:POLH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0000731
"DNA synthesis involved in DNA repair" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006290 "pyrimidine dimer repair" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0010225 "response to
UV-C" evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0005737 GO:GO:0003684 GO:GO:0010225
GO:GO:0000731 GO:GO:0006301 GO:GO:0003887 GO:GO:0006290
Gene3D:3.30.1490.100 SUPFAM:SSF100879 OMA:SPPLTML
InterPro:IPR017061 PIRSF:PIRSF036603 GeneTree:ENSGT00530000062942
EMBL:AADN02011866 EMBL:AADN02011865 IPI:IPI00596429
Ensembl:ENSGALT00000016798 ArrayExpress:F1NAG6 Uniprot:F1NAG6
Length = 686
Score = 144 (55.7 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 37/135 (27%), Positives = 61/135 (45%)
Query: 23 GIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSL 82
G I EE+R +V + G CSAG++ N++LAK+ +NKPN Q L + R F S +
Sbjct: 184 GAVIVEEIRVAVEKATGFRCSAGISHNKMLAKLACGLNKPNRQ-TLVSSRSVPQLF-SQM 241
Query: 83 PIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSL-LCAVFSHSTADFFLSVGLGLGSTNT 141
P+ I +G + D+ G+ E+ + + L F T + + G+
Sbjct: 242 PVSSIRNLGGKLGVAITDILGVEYIGEVTKFSEMELQTHFGDKTGSWLYDLCRGIDDEPV 301
Query: 142 PQARFRKSISSERTF 156
+SI + F
Sbjct: 302 KNRHLPQSIGCSKNF 316
Score = 49 (22.3 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 392 DDYKCSLCGTEMPPSFIEERQEHSDFHLAERLQK 425
D C CG + E EH D+H A LQ+
Sbjct: 596 DQQCCEKCGQYV---LAWELPEHMDYHFAVELQR 626
>ZFIN|ZDB-GENE-050417-376 [details] [associations]
symbol:poli "polymerase (DNA directed) iota"
species:7955 "Danio rerio" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 ZFIN:ZDB-GENE-050417-376
GO:GO:0003684 GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100
SUPFAM:SSF100879 CTD:11201 HOVERGEN:HBG053634 KO:K03510
EMBL:BC092781 IPI:IPI00481247 RefSeq:NP_001017834.1
UniGene:Dr.78857 ProteinModelPortal:Q568P0 SMR:Q568P0 GeneID:550532
KEGG:dre:550532 InParanoid:Q568P0 NextBio:20879773 Uniprot:Q568P0
Length = 710
Score = 153 (58.9 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 49/162 (30%), Positives = 79/162 (48%)
Query: 23 GIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQF-VLPNDRMAVMTFISS 81
G IA E+R +++ GLT AGVA N+LLAK+ S KPN Q +LP+ +M+ ++
Sbjct: 181 GSVIAAEMRQAIFSTLGLTGCAGVASNKLLAKLVSGSFKPNQQTTLLPHSNAELMSSLTG 240
Query: 82 LPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGSTNT 141
L K+ GIG T L+ + +N + L S L F A ++ G+ +
Sbjct: 241 LI--KVPGIGYKTREKLKALGLVNVRDLQLYPLSDLVKEFGEMNAKRVQNLACGIDDSPV 298
Query: 142 PQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKE 183
A +S+S E +F + +K+ E+ L+ M K+
Sbjct: 299 TPAGPPQSLSDEDSFKKMSTLEEVLKKIEELLINLTERMHKD 340
Score = 39 (18.8 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 6 DEAYLDITEVCRER 19
DE ++D+TE+ +R
Sbjct: 135 DENFMDVTEMVEKR 148
>UNIPROTKB|J3KSW2 [details] [associations]
symbol:POLI "DNA polymerase iota" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0003684 GO:GO:0006281 GO:GO:0003887
Gene3D:3.30.1490.100 SUPFAM:SSF100879 EMBL:AC093462 HGNC:HGNC:9182
ChiTaRS:POLI ProteinModelPortal:J3KSW2 Ensembl:ENST00000579434
Uniprot:J3KSW2
Length = 637
Score = 152 (58.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 58/174 (33%), Positives = 87/174 (50%)
Query: 10 LDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLP 69
+++ +V R + G +IA E+R ++Y + GLT AGVA N+LLAK+ S + KPN Q VL
Sbjct: 85 INLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLL 144
Query: 70 NDRMAVMTFISSLP-IRKIGGIGKVTEHILRDVFGINTCEEMLQKGS--LLCAVFSHSTA 126
+ + I SL I++I GIG T L + GIN+ + LQ S +L S A
Sbjct: 145 PE--SCQHLIHSLNHIKEIPGIGYKTAKCL-EALGINSVRD-LQTFSPKILEKELGISVA 200
Query: 127 DFFLSVGLGLGSTNTPQARFR--KSISSERTFSVTEDKALLYRKLAEI-AEMLS 177
L G N+P +S S E +F + K+ E+ A +L+
Sbjct: 201 QRIQK--LSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNKIEELLASLLN 252
Score = 37 (18.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 6 DEAYLDITEVCRER 19
DE ++D+TE+ +R
Sbjct: 48 DENFVDLTEMVEKR 61
>POMBASE|SPBC16A3.11 [details] [associations]
symbol:eso1 "sister chromatid cohesion protein/DNA
polymerase eta Eso1 fusion protein" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006473
"protein acetylation" evidence=IC] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016407 "acetyltransferase activity"
evidence=ISS] [GO:0019985 "translesion synthesis" evidence=IMP]
[GO:0034087 "establishment of mitotic sister chromatid cohesion"
evidence=IMP] [GO:0034182 "regulation of maintenance of mitotic
sister chromatid cohesion" evidence=TAS] [GO:0043596 "nuclear
replication fork" evidence=IC] InterPro:IPR001126
InterPro:IPR015880 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 SMART:SM00355
PomBase:SPBC16A3.11 GO:GO:0046872 GO:GO:0003684 EMBL:CU329671
GO:GO:0008270 GenomeReviews:CU329671_GR GO:GO:0000790 GO:GO:0043596
GO:GO:0016746 GO:GO:0034087 GO:GO:0006473 GO:GO:0003887
GO:GO:0019985 eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879
KO:K03509 EMBL:AB039861 PIR:T39541 RefSeq:NP_596778.1
ProteinModelPortal:O42917 IntAct:O42917 STRING:O42917
EnsemblFungi:SPBC16A3.11.1 GeneID:2539666 KEGG:spo:SPBC16A3.11
OrthoDB:EOG4M0J8V NextBio:20800820 GO:GO:0034182 Uniprot:O42917
Length = 872
Score = 130 (50.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 41/142 (28%), Positives = 74/142 (52%)
Query: 25 EIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSLPI 84
+I +E+R +Y + TCSAGV+ N +L+K+ S NKPN Q +L + A+ ++ SL I
Sbjct: 221 KIVKEIRDDIYLQLKYTCSAGVSFNPMLSKLVSSRNKPNKQTILTKN--AIQDYLVSLKI 278
Query: 85 RKIGGIG-KVTEHILRDVFGINTCEEMLQKG-SLLCAVFSHSTADFFLSVGLGLGSTN-T 141
I +G K E I+ ++ G ++ +++ L + ++ G+ +T T
Sbjct: 279 TDIRMLGGKFGEEII-NLLGTDSIKDVWNMSMDFLIDKLGQTNGPLVWNLCHGIDNTEIT 337
Query: 142 PQARFRKSISSERTFSVTEDKA 163
Q + KS+ S + FS + K+
Sbjct: 338 TQVQI-KSMLSAKNFSQQKVKS 358
Score = 63 (27.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 392 DDYKCSLCGTEMPPSFIEERQEHSDFHLAERLQKEESGSDL 432
+ Y C C ++ + ER EH D+H+A + ++E ++L
Sbjct: 536 ETYTCEECEQKIT---LSERNEHEDYHIALSISRKERYNNL 573
Score = 39 (18.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 18/57 (31%), Positives = 24/57 (42%)
Query: 371 DITPDNKVGTS---SNQKDQF--IWLD----DYKCSLCGTEMPPSFIEERQEHSDFH 418
++TP+ K T SN D + LD CS C E + E+ HS FH
Sbjct: 621 NLTPNWKKQTPKAISNSSDNMTQLHLDLANSTVTCSECSMEYNSTSEEDILLHSRFH 677
>UNIPROTKB|Q9UNA4 [details] [associations]
symbol:POLI "DNA polymerase iota" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005622 "intracellular"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005654 GO:GO:0046872 GO:GO:0003684
GO:GO:0006260 GO:GO:0006281 GO:GO:0003887 eggNOG:COG0389
Gene3D:3.30.1490.100 SUPFAM:SSF100879 EMBL:AY094607 EMBL:AC093462
EMBL:AF140501 EMBL:AL136670 EMBL:BC032662 EMBL:AF245438
IPI:IPI00296840 RefSeq:NP_009126.2 UniGene:Hs.438533 PDB:1T3N
PDB:1ZET PDB:2ALZ PDB:2DPI PDB:2DPJ PDB:2FLL PDB:2FLN PDB:2FLP
PDB:2KHU PDB:2KHW PDB:2KTF PDB:2L0F PDB:2L0G PDB:3EPG PDB:3EPI
PDB:3G6V PDB:3G6X PDB:3G6Y PDB:3GV5 PDB:3GV7 PDB:3GV8 PDB:3H40
PDB:3H4B PDB:3H4D PDB:3NGD PDB:3OSN PDB:3Q8P PDB:3Q8Q PDB:3Q8R
PDB:3Q8S PDB:4EBC PDB:4EBD PDB:4EBE PDB:4EYH PDB:4EYI PDB:4FS1
PDB:4FS2 PDBsum:1T3N PDBsum:1ZET PDBsum:2ALZ PDBsum:2DPI
PDBsum:2DPJ PDBsum:2FLL PDBsum:2FLN PDBsum:2FLP PDBsum:2KHU
PDBsum:2KHW PDBsum:2KTF PDBsum:2L0F PDBsum:2L0G PDBsum:3EPG
PDBsum:3EPI PDBsum:3G6V PDBsum:3G6X PDBsum:3G6Y PDBsum:3GV5
PDBsum:3GV7 PDBsum:3GV8 PDBsum:3H40 PDBsum:3H4B PDBsum:3H4D
PDBsum:3NGD PDBsum:3OSN PDBsum:3Q8P PDBsum:3Q8Q PDBsum:3Q8R
PDBsum:3Q8S PDBsum:4EBC PDBsum:4EBD PDBsum:4EBE PDBsum:4EYH
PDBsum:4EYI PDBsum:4FS1 PDBsum:4FS2 ProteinModelPortal:Q9UNA4
SMR:Q9UNA4 IntAct:Q9UNA4 MINT:MINT-1189678 STRING:Q9UNA4
PhosphoSite:Q9UNA4 DMDM:59798440 PaxDb:Q9UNA4 PRIDE:Q9UNA4
DNASU:11201 Ensembl:ENST00000579534 GeneID:11201 KEGG:hsa:11201
UCSC:uc002lfj.4 CTD:11201 GeneCards:GC18P051731 H-InvDB:HIX0014457
HGNC:HGNC:9182 HPA:HPA012000 MIM:605252 neXtProt:NX_Q9UNA4
PharmGKB:PA33502 HOGENOM:HOG000234325 HOVERGEN:HBG053634
InParanoid:Q9UNA4 KO:K03510 OMA:VFYELPE OrthoDB:EOG46T310
ChEMBL:CHEMBL5391 ChiTaRS:POLI EvolutionaryTrace:Q9UNA4
GenomeRNAi:11201 NextBio:42637 Bgee:Q9UNA4 CleanEx:HS_POLI
Genevestigator:Q9UNA4 GermOnline:ENSG00000101751 Uniprot:Q9UNA4
Length = 740
Score = 152 (58.6 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 58/174 (33%), Positives = 87/174 (50%)
Query: 10 LDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLP 69
+++ +V R + G +IA E+R ++Y + GLT AGVA N+LLAK+ S + KPN Q VL
Sbjct: 188 INLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLL 247
Query: 70 NDRMAVMTFISSLP-IRKIGGIGKVTEHILRDVFGINTCEEMLQKGS--LLCAVFSHSTA 126
+ + I SL I++I GIG T L + GIN+ + LQ S +L S A
Sbjct: 248 PE--SCQHLIHSLNHIKEIPGIGYKTAKCL-EALGINSVRD-LQTFSPKILEKELGISVA 303
Query: 127 DFFLSVGLGLGSTNTPQARFR--KSISSERTFSVTEDKALLYRKLAEI-AEMLS 177
L G N+P +S S E +F + K+ E+ A +L+
Sbjct: 304 QRIQK--LSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNKIEELLASLLN 355
Score = 37 (18.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 6 DEAYLDITEVCRER 19
DE ++D+TE+ +R
Sbjct: 151 DENFVDLTEMVEKR 164
>FB|FBgn0037554 [details] [associations]
symbol:DNApol-iota "DNApol-iota" species:7227 "Drosophila
melanogaster" [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IMP;IDA;NAS] [GO:0019985 "translesion synthesis"
evidence=ISS;NAS;IDA] [GO:0003684 "damaged DNA binding"
evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
EMBL:AE014297 GO:GO:0003684 GO:GO:0003887 GO:GO:0019985
eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879 HSSP:P96022
GeneTree:ENSGT00530000062942 KO:K03510 EMBL:AY051762 EMBL:AB049434
RefSeq:NP_649772.1 RefSeq:NP_731214.1 UniGene:Dm.9926 SMR:Q9VHV1
IntAct:Q9VHV1 MINT:MINT-308720 EnsemblMetazoa:FBtr0081797
EnsemblMetazoa:FBtr0081798 GeneID:40965 KEGG:dme:Dmel_CG7602
UCSC:CG7602-RA CTD:40965 FlyBase:FBgn0037554 InParanoid:Q9VHV1
OMA:CCAGIAY OrthoDB:EOG42RBPH GenomeRNAi:40965 NextBio:821498
Uniprot:Q9VHV1
Length = 737
Score = 144 (55.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 47/170 (27%), Positives = 85/170 (50%)
Query: 16 CRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAV 75
C +R G IA+E+R + G+TC AG+A N+LLAK+ ++PN Q VL +
Sbjct: 157 CAQRLAIGTRIAQEIREELKLRLGITCCAGIAYNKLLAKLVGSSHEPNQQTVLVSTYAE- 215
Query: 76 MTFISSL-PIRKIGGIGKVTEHILRDVFGINTCEEMLQKG-SLLCAVFSHSTADFFLSVG 133
F+ L ++++ GIG+ T+ +L + G+++ E++ Q ++ F TA +
Sbjct: 216 -QFMRELGDLKRVTGIGQKTQCLLLEA-GMSSVEQLQQCDMDVMRKKFGFETATRLRDLA 273
Query: 134 LGLGSTNTPQARFRKSISSE---RTFSVTEDKALLYRKLAE-IAEMLSAD 179
G ++ + K+I E + SV D +R L + + E ++ D
Sbjct: 274 FGRDTSLVRPSGKPKTIGMEDACKPISVRTDVEERFRMLLKRLVEQVAED 323
Score = 44 (20.5 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 231 PVSLRLIGLRVTQFNEDKVRAPS 253
P ++ L+GL ++F E KV + S
Sbjct: 399 PFNITLLGLAFSKFQERKVGSSS 421
>RGD|1305212 [details] [associations]
symbol:Poli "polymerase (DNA directed), iota" species:10116
"Rattus norvegicus" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008152 "metabolic process" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
RGD:1305212 GO:GO:0005634 GO:GO:0003684 GO:GO:0006281 EMBL:CH473971
GO:GO:0003887 Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 GeneTree:ENSGT00530000062942 CTD:11201 KO:K03510
OrthoDB:EOG46T310 IPI:IPI00870858 RefSeq:NP_001099607.1
UniGene:Rn.136855 Ensembl:ENSRNOT00000016189 GeneID:291526
KEGG:rno:291526 NextBio:632673 Uniprot:D4A8I8
Length = 732
Score = 146 (56.5 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 52/157 (33%), Positives = 77/157 (49%)
Query: 23 GIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSL 82
G +IA E+R +++ + GLT AGVAPN+LLAK+ S + KPN Q VL + + I SL
Sbjct: 196 GSQIAAEMREAMHNQLGLTGCAGVAPNKLLAKLVSGVFKPNQQTVLLPE--SCQHLIHSL 253
Query: 83 P-IRKIGGIGKVTEHILRDVFGINTCEEMLQKGSL--LCAVFSHSTADFFLSVGLGLGST 139
I+++ GIG T L +V GIN+ + LQ + L S A + G +
Sbjct: 254 NHIKEMPGIGYKTAKRL-EVLGINSVHD-LQTFPIKTLEKELGISVAQRIRKLSFGEDKS 311
Query: 140 NTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEML 176
+ +S S E TF + K+ E+ L
Sbjct: 312 PVTPSGPPQSFSEEDTFKKCSSEVEAKTKIEELLSSL 348
Score = 37 (18.1 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 6 DEAYLDITEVCRER 19
DE ++D+TE+ +R
Sbjct: 146 DENFVDLTEMVEKR 159
>UNIPROTKB|F1MHR0 [details] [associations]
symbol:POLI "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0003684 GO:GO:0006281 GO:GO:0003887
Gene3D:3.30.1490.100 SUPFAM:SSF100879 GeneTree:ENSGT00530000062942
OMA:VFYELPE EMBL:DAAA02057088 IPI:IPI00687719
Ensembl:ENSBTAT00000012034 Uniprot:F1MHR0
Length = 701
Score = 137 (53.3 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 50/171 (29%), Positives = 84/171 (49%)
Query: 19 RGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVL-PNDRMAVMT 77
R + G +I E+R ++Y++ GLT AGVA N+LLAK+ S + KPN Q VL P ++
Sbjct: 161 RLLVGSQIVAEMREAMYQQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESSQELIH 220
Query: 78 FISSLPIRKIGGIG-KVTEHILRDVFGINTCEEMLQKGS-LLCAVFSHSTADFFLSVGLG 135
++ I+++ GIG K T+ + + GI++ ++ S +L S A + G
Sbjct: 221 SLNH--IKEMPGIGYKTTKRL--EALGISSVRDLQTFPSKVLEKELGISVAQRIQKLSFG 276
Query: 136 LGSTNTPQARFRKSISSERTF----SVTEDKALLYRKLAEIAEMLSADMQK 182
+ + +S S E +F S E K + LA + + D +K
Sbjct: 277 EDDSPVTPSGPPQSFSEEDSFKKCSSEVEAKTKIEELLASLLNRVCQDGRK 327
Score = 38 (18.4 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 14/49 (28%), Positives = 20/49 (40%)
Query: 415 SDFHLAERLQKEESGSDLRILTHRERCVRTQRDHIASHRKRKKQKLFEK 463
S FH LQ E+ S R ++ V T H R+++ EK
Sbjct: 616 SVFHSFPNLQSEQLLSKNRTTDSHKQPVATVSRHEGLKENREQESPDEK 664
>CGD|CAL0001748 [details] [associations]
symbol:orf19.4412 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0005657 "replication fork"
evidence=IEA] [GO:0017125 "deoxycytidyl transferase activity"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0070987 "error-free translesion synthesis"
evidence=IEA] [GO:0042276 "error-prone translesion synthesis"
evidence=IEA] InterPro:IPR001126 InterPro:IPR012112
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PIRSF:PIRSF036573 PROSITE:PS50173 InterPro:IPR001357 CGD:CAL0001748
Pfam:PF00533 GO:GO:0000287 GO:GO:0003684 GO:GO:0006281
EMBL:AACQ01000179 EMBL:AACQ01000178 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 GO:GO:0003887 eggNOG:COG0389 Gene3D:3.30.1490.100
SUPFAM:SSF100879 KO:K03515 RefSeq:XP_711860.1 RefSeq:XP_723600.1
ProteinModelPortal:Q59Q77 STRING:Q59Q77 GeneID:3646519
GeneID:3646539 KEGG:cal:CaO19.11890 KEGG:cal:CaO19.4412
Uniprot:Q59Q77
Length = 1113
Score = 129 (50.5 bits), Expect = 0.00013, P = 0.00013
Identities = 49/173 (28%), Positives = 80/173 (46%)
Query: 4 SLDEAYLDITEVCRERGIS-GIEIAEELRTSVYEEA-GLT-C--SAGVAPNRLLAKVCSD 58
S+DE +D T C G+S + + EL T + ++ LT C S G + N LLAK+
Sbjct: 492 SIDEVLVDATSYCHS-GVSDSVSLVNELATRIRKDVFKLTNCPVSVGASTNVLLAKLALR 550
Query: 59 INKPNGQFVLPNDRMAVMTFISSLPIRKIGGIGK-VTEHILRDVFGINT-CEEMLQ-KGS 115
KPNGQF L +D + F+ S+ I+ + G G+ + E + ++ N ++++
Sbjct: 551 KAKPNGQFYLFDD---IEKFLESIYIKDLPGFGRGILEKLNSEIQSSNPQIKDVVTISKQ 607
Query: 116 LLCAVFSHSTADFFLSVGLGLGST------NTPQARF-RKSISSERTFSVTED 161
L + T G+ T N P+A RKS+S + F + D
Sbjct: 608 RLVQLLGEKTGTKLFEYARGMDETSIEIDTNNPEAVLGRKSVSVDVNFGIRFD 660
>WB|WBGene00018721 [details] [associations]
symbol:polh-1 species:6239 "Caenorhabditis elegans"
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0005634
GO:GO:0003684 GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100
SUPFAM:SSF100879 KO:K03509 InterPro:IPR017061 PIRSF:PIRSF036603
GeneTree:ENSGT00530000062942 EMBL:FO080224 EMBL:AB244413 PIR:A88395
RefSeq:NP_497480.2 UniGene:Cel.10441 ProteinModelPortal:G5EFY1
SMR:G5EFY1 EnsemblMetazoa:F53A3.2 GeneID:175337
KEGG:cel:CELE_F53A3.2 CTD:175337 WormBase:F53A3.2 OMA:GVGNNKM
NextBio:887718 Uniprot:G5EFY1
Length = 584
Score = 112 (44.5 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 46/182 (25%), Positives = 80/182 (43%)
Query: 9 YLDITEVCRERG---ISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQ 65
Y++ C E I+ + + E++R ++EE CSAGV N+++AK+ +KP Q
Sbjct: 176 YIENARNCTENLLLLIAAVTV-EQIRQQIHEETQFFCSAGVGNNKMMAKLVCARHKPRQQ 234
Query: 66 FVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKG-SLLCAVFSHS 124
++P V + PI + G G + ++++ I E+L+ S L F +
Sbjct: 235 TLIP--WFYVREILRLTPIGDVRGFGGKMGNRIQEMLNITLMGELLEVDISQLIETFPNQ 292
Query: 125 TADFFLSVGLGLGSTNTPQARFRKSISSERTF-------SVTEDKALLYRKLAEIAEMLS 177
++ SV G + SI+ + F SV E K L E+A+ L+
Sbjct: 293 H-EYLRSVAEGHCDEPVRPRKESSSIAVSKNFPGKLSIRSVLELKKWLDGLTKELAKRLA 351
Query: 178 AD 179
D
Sbjct: 352 TD 353
Score = 55 (24.4 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 18/74 (24%), Positives = 32/74 (43%)
Query: 386 DQFIWLDDYKCS-LCGTEMPPSFIEERQEHSDFHLAERLQKEESGSDLRILTHRERCVRT 444
D +I++D K S + +PP + Q A L+ + GS R H + +
Sbjct: 510 DNWIFVDGKKFSKMAWRHLPPDIKKHYQHRIALEEARALKSKTGGSRKRAGAHTDNAQKP 569
Query: 445 QRDH-IASHRKRKK 457
++ + S K+KK
Sbjct: 570 KKPKSLESFFKKKK 583
Score = 41 (19.5 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 3 ASLDEAYLDITEVCRER 19
AS+DEA+LD++ ++
Sbjct: 114 ASVDEAFLDLSAYTNQK 130
>POMBASE|SPBC1347.01c [details] [associations]
symbol:rev1 "deoxycytidyl transferase Rev1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000287 "magnesium ion
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0005819 "spindle" evidence=IDA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=ISO] [GO:0017125
"deoxycytidyl transferase activity" evidence=ISO] [GO:0043504
"mitochondrial DNA repair" evidence=IC] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=ISO] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 PomBase:SPBC1347.01c Pfam:PF00533 GO:GO:0005739
GO:GO:0005730 GO:GO:0005819 GO:GO:0000287 GO:GO:0003684
GO:GO:0006260 EMBL:CU329671 GenomeReviews:CU329671_GR SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0003887 GO:GO:0043504
eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879 GO:GO:0017125
KO:K03515 RefSeq:NP_596693.2 ProteinModelPortal:O94623
IntAct:O94623 STRING:O94623 EnsemblFungi:SPBC1347.01c.1
GeneID:2539723 KEGG:spo:SPBC1347.01c OMA:FHIDFDC OrthoDB:EOG49PF6V
NextBio:20800875 Uniprot:O94623
Length = 935
Score = 125 (49.1 bits), Expect = 0.00029, P = 0.00029
Identities = 42/157 (26%), Positives = 74/157 (47%)
Query: 4 SLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPN 63
S+DEA LDIT EIAE +R+ V E+ S G+ PN LLA++ KP+
Sbjct: 376 SIDEALLDITSSVSSFQ-DCFEIAESIRSQVREKTNCEVSVGIGPNVLLARLALRKAKPH 434
Query: 64 GQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEM--LQKGSLLCAVF 121
+ L + V +S L ++ + G+G L +++G+ T ++ ++K +L F
Sbjct: 435 NVYSLSIEN--VFDVLSPLSVQDLPGVGSSQAQKLFNLYGVRTIGQLQRIEKFNLQ-ETF 491
Query: 122 SHSTADFFLSVGLGLGSTNTPQARFRKSISSERTFSV 158
+ ++ G+ + R+SIS + + V
Sbjct: 492 GVNYGLHLYNISRGIDTDIINNETPRRSISVDVNWGV 528
>CGD|CAL0002818 [details] [associations]
symbol:RAD32 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005657 "replication fork"
evidence=IEA] [GO:0070987 "error-free translesion synthesis"
evidence=IEA] [GO:0042276 "error-prone translesion synthesis"
evidence=IEA] [GO:0034087 "establishment of mitotic sister
chromatid cohesion" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 CGD:CAL0002818 GO:GO:0003684 GO:GO:0006281
GO:GO:0003887 EMBL:AACQ01000019 eggNOG:COG0389 Gene3D:3.30.1490.100
SUPFAM:SSF100879 KO:K03509 HOGENOM:HOG000065930 RefSeq:XP_720989.1
ProteinModelPortal:Q5AHD1 STRING:Q5AHD1 GeneID:3637340
KEGG:cal:CaO19.866 Uniprot:Q5AHD1
Length = 640
Score = 121 (47.7 bits), Expect = 0.00056, Sum P(3) = 0.00056
Identities = 27/82 (32%), Positives = 49/82 (59%)
Query: 21 ISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFIS 80
I G +I E+R ++EE G T SAG+A + +AK+ + KP+ Q ++ N A+ +F++
Sbjct: 249 IIGSQILLEVRKDIFEELGYTTSAGLARTKQVAKLAAGFKKPDAQTIIRNS--AINSFLT 306
Query: 81 SLPIRKIGGIG-KVTEHILRDV 101
+ + + G+G K+ E I+ V
Sbjct: 307 NFELTDVTGMGGKLGESIINKV 328
Score = 46 (21.3 bits), Expect = 0.00056, Sum P(3) = 0.00056
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 395 KCSLCGTEMPPSFIEERQEHSDFHLAERLQKE 426
KCS C +++ EH+D+H+A L +
Sbjct: 610 KCSRCKLS-----VDDPVEHNDYHIAMDLSNK 636
Score = 37 (18.1 bits), Expect = 0.00056, Sum P(3) = 0.00056
Identities = 6/10 (60%), Positives = 9/10 (90%)
Query: 3 ASLDEAYLDI 12
AS+DE Y+D+
Sbjct: 165 ASVDECYIDL 174
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.373 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 481 468 0.00098 118 3 11 22 0.42 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 87
No. of states in DFA: 612 (65 KB)
Total size of DFA: 264 KB (2140 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 43.97u 0.09s 44.06t Elapsed: 00:00:01
Total cpu time: 43.98u 0.09s 44.07t Elapsed: 00:00:01
Start: Sat May 11 03:16:00 2013 End: Sat May 11 03:16:01 2013