Query 011641
Match_columns 480
No_of_seqs 334 out of 3085
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 12:20:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011641.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011641hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vtf_A UDP-glucose 6-dehydroge 100.0 5.6E-95 1.9E-99 747.7 48.1 419 1-468 21-444 (444)
2 4a7p_A UDP-glucose dehydrogena 100.0 1.6E-92 5.6E-97 736.0 47.4 433 2-470 9-445 (446)
3 3gg2_A Sugar dehydrogenase, UD 100.0 2E-88 6.7E-93 708.8 49.8 432 2-470 3-440 (450)
4 3g79_A NDP-N-acetyl-D-galactos 100.0 1.9E-88 6.6E-93 709.1 44.9 430 1-469 18-472 (478)
5 3ojo_A CAP5O; rossmann fold, c 100.0 7E-88 2.4E-92 696.4 42.2 410 2-469 12-426 (431)
6 2o3j_A UDP-glucose 6-dehydroge 100.0 1.1E-85 3.9E-90 694.6 53.3 460 1-471 9-471 (481)
7 2y0c_A BCEC, UDP-glucose dehyd 100.0 3.4E-83 1.1E-87 674.1 49.0 451 2-473 9-465 (478)
8 2q3e_A UDP-glucose 6-dehydroge 100.0 2E-82 6.8E-87 668.5 53.6 459 1-468 5-466 (467)
9 3pid_A UDP-glucose 6-dehydroge 100.0 7.3E-77 2.5E-81 613.1 36.5 387 1-453 36-424 (432)
10 1mv8_A GMD, GDP-mannose 6-dehy 100.0 1.7E-75 5.7E-80 611.1 41.7 423 2-467 1-436 (436)
11 1dlj_A UDP-glucose dehydrogena 100.0 7.7E-70 2.6E-74 562.1 38.6 396 2-452 1-401 (402)
12 3qha_A Putative oxidoreductase 100.0 1.2E-31 4.2E-36 265.7 24.1 248 2-300 16-280 (296)
13 3obb_A Probable 3-hydroxyisobu 100.0 1.3E-31 4.5E-36 265.4 24.3 250 1-300 3-271 (300)
14 4dll_A 2-hydroxy-3-oxopropiona 100.0 2.3E-31 7.8E-36 266.6 25.0 249 1-300 31-290 (320)
15 3doj_A AT3G25530, dehydrogenas 100.0 2E-31 6.7E-36 265.9 23.0 251 1-301 21-283 (310)
16 4gbj_A 6-phosphogluconate dehy 100.0 3.2E-31 1.1E-35 262.6 23.5 248 3-300 7-266 (297)
17 3pef_A 6-phosphogluconate dehy 100.0 2.4E-30 8.2E-35 255.2 23.8 251 1-301 1-263 (287)
18 3pdu_A 3-hydroxyisobutyrate de 100.0 2E-30 6.8E-35 255.8 21.1 251 1-301 1-263 (287)
19 3g0o_A 3-hydroxyisobutyrate de 100.0 6.8E-30 2.3E-34 254.0 24.9 251 2-301 8-271 (303)
20 2h78_A Hibadh, 3-hydroxyisobut 100.0 1.8E-29 6E-34 250.7 24.2 250 1-300 3-271 (302)
21 4ezb_A Uncharacterized conserv 100.0 3.9E-28 1.3E-32 242.7 19.3 242 1-302 24-283 (317)
22 3qsg_A NAD-binding phosphogluc 100.0 1.6E-27 5.5E-32 237.8 21.3 248 1-304 24-283 (312)
23 3l6d_A Putative oxidoreductase 99.9 7.2E-26 2.5E-30 225.3 20.6 246 1-301 9-271 (306)
24 4e21_A 6-phosphogluconate dehy 99.9 6.9E-25 2.4E-29 222.2 25.9 246 2-300 23-327 (358)
25 1vpd_A Tartronate semialdehyde 99.9 9.6E-25 3.3E-29 216.0 25.2 249 2-300 6-266 (299)
26 1yb4_A Tartronic semialdehyde 99.9 6.7E-25 2.3E-29 216.6 20.5 252 1-303 3-266 (295)
27 2gf2_A Hibadh, 3-hydroxyisobut 99.9 4.6E-24 1.6E-28 210.8 22.4 249 2-300 1-268 (296)
28 3cky_A 2-hydroxymethyl glutara 99.9 2.2E-23 7.4E-28 206.4 26.6 251 1-301 4-267 (301)
29 3k96_A Glycerol-3-phosphate de 99.9 9.1E-24 3.1E-28 214.0 20.4 280 1-315 29-349 (356)
30 4gwg_A 6-phosphogluconate dehy 99.9 1.3E-23 4.3E-28 219.9 20.6 207 1-251 4-221 (484)
31 2uyy_A N-PAC protein; long-cha 99.9 6.9E-23 2.4E-27 204.4 23.1 249 2-300 31-291 (316)
32 2cvz_A Dehydrogenase, 3-hydrox 99.9 4.2E-23 1.4E-27 203.0 21.2 249 1-302 1-259 (289)
33 2p4q_A 6-phosphogluconate dehy 99.9 9E-22 3.1E-26 207.5 22.3 251 2-298 11-289 (497)
34 1txg_A Glycerol-3-phosphate de 99.9 1.1E-20 3.7E-25 189.6 21.9 275 2-314 1-331 (335)
35 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.9 2.7E-20 9.1E-25 195.8 25.6 254 2-298 2-284 (478)
36 2pgd_A 6-phosphogluconate dehy 99.9 1.2E-20 4E-25 198.8 22.7 249 2-297 3-281 (482)
37 2zyd_A 6-phosphogluconate dehy 99.9 9.3E-21 3.2E-25 199.1 21.3 206 2-251 16-231 (480)
38 1evy_A Glycerol-3-phosphate de 99.9 1.4E-21 4.8E-26 198.9 14.6 279 3-316 17-344 (366)
39 1yj8_A Glycerol-3-phosphate de 99.9 2.9E-21 1E-25 197.3 16.8 269 1-304 21-353 (375)
40 1i36_A Conserved hypothetical 99.9 8.2E-21 2.8E-25 184.4 18.6 231 2-300 1-243 (264)
41 2iz1_A 6-phosphogluconate dehy 99.9 4.8E-20 1.7E-24 193.7 23.6 250 2-298 6-286 (474)
42 1x0v_A GPD-C, GPDH-C, glycerol 99.8 1.2E-20 4.2E-25 191.0 16.2 267 2-303 9-334 (354)
43 2ew2_A 2-dehydropantoate 2-red 99.8 1.4E-19 4.7E-24 179.7 21.3 266 1-299 3-302 (316)
44 1z82_A Glycerol-3-phosphate de 99.8 3.3E-20 1.1E-24 186.6 16.2 257 2-303 15-310 (335)
45 3dtt_A NADP oxidoreductase; st 99.8 1.4E-18 4.9E-23 167.0 14.4 198 1-229 19-234 (245)
46 2g5c_A Prephenate dehydrogenas 99.8 4.6E-17 1.6E-21 159.4 23.4 196 1-235 1-200 (281)
47 2dpo_A L-gulonate 3-dehydrogen 99.8 9.7E-18 3.3E-22 167.1 18.2 207 1-255 6-228 (319)
48 3ggo_A Prephenate dehydrogenas 99.7 2.6E-16 8.7E-21 156.7 23.8 194 1-233 33-230 (314)
49 1zej_A HBD-9, 3-hydroxyacyl-CO 99.7 2.6E-17 9E-22 161.7 15.3 192 2-254 13-207 (293)
50 3mog_A Probable 3-hydroxybutyr 99.7 1E-16 3.5E-21 168.2 18.2 209 2-254 6-223 (483)
51 1f0y_A HCDH, L-3-hydroxyacyl-C 99.7 2.5E-16 8.6E-21 155.9 20.0 204 1-254 15-239 (302)
52 2qyt_A 2-dehydropantoate 2-red 99.7 1.2E-16 4E-21 158.9 17.2 264 1-298 8-306 (317)
53 1ks9_A KPA reductase;, 2-dehyd 99.7 2.1E-17 7.1E-22 162.0 11.5 253 2-298 1-280 (291)
54 3k6j_A Protein F01G10.3, confi 99.7 1.8E-16 6.1E-21 164.4 18.5 202 1-252 54-267 (460)
55 1bg6_A N-(1-D-carboxylethyl)-L 99.7 1.9E-16 6.6E-21 160.0 17.1 293 2-342 5-355 (359)
56 4e12_A Diketoreductase; oxidor 99.7 2.1E-15 7.2E-20 147.9 22.6 207 2-254 5-225 (283)
57 4fgw_A Glycerol-3-phosphate de 99.7 2.5E-16 8.7E-21 159.9 15.5 210 2-240 35-283 (391)
58 3b1f_A Putative prephenate deh 99.7 2.9E-15 1E-19 147.2 21.0 173 1-211 6-183 (290)
59 3ghy_A Ketopantoate reductase 99.7 1.4E-15 4.7E-20 152.9 18.9 257 1-290 3-306 (335)
60 2wtb_A MFP2, fatty acid multif 99.7 7.5E-16 2.6E-20 169.3 18.0 207 1-251 312-526 (725)
61 1wdk_A Fatty oxidation complex 99.7 7.8E-16 2.7E-20 169.0 17.7 203 1-251 314-528 (715)
62 2f1k_A Prephenate dehydrogenas 99.7 6.9E-15 2.4E-19 143.6 22.0 190 2-231 1-190 (279)
63 3d1l_A Putative NADP oxidoredu 99.7 1.7E-15 6E-20 146.9 17.5 197 2-253 11-212 (266)
64 3hwr_A 2-dehydropantoate 2-red 99.7 6.2E-15 2.1E-19 147.0 20.9 247 1-290 19-297 (318)
65 1zcj_A Peroxisomal bifunctiona 99.6 5.2E-15 1.8E-19 154.9 20.5 205 1-252 37-250 (463)
66 3ado_A Lambda-crystallin; L-gu 99.6 5.6E-15 1.9E-19 146.4 19.1 206 2-254 7-227 (319)
67 3gt0_A Pyrroline-5-carboxylate 99.6 1.1E-14 3.8E-19 139.9 20.7 197 1-254 2-207 (247)
68 3c24_A Putative oxidoreductase 99.6 3E-15 1E-19 147.0 14.5 204 1-253 11-230 (286)
69 2izz_A Pyrroline-5-carboxylate 99.6 2.2E-14 7.7E-19 143.2 20.9 197 1-253 22-230 (322)
70 3hn2_A 2-dehydropantoate 2-red 99.6 5.3E-14 1.8E-18 139.9 22.8 255 2-290 3-288 (312)
71 3i83_A 2-dehydropantoate 2-red 99.6 6.3E-14 2.1E-18 139.8 21.3 250 2-290 3-287 (320)
72 3ktd_A Prephenate dehydrogenas 99.6 3.5E-14 1.2E-18 142.4 19.4 185 1-230 8-209 (341)
73 2pv7_A T-protein [includes: ch 99.6 3.5E-14 1.2E-18 140.2 17.9 224 1-318 21-248 (298)
74 3tri_A Pyrroline-5-carboxylate 99.6 2.3E-13 7.8E-18 133.2 21.4 195 1-253 3-208 (280)
75 2ahr_A Putative pyrroline carb 99.5 1E-13 3.5E-18 133.9 17.2 193 1-253 3-199 (259)
76 1jay_A Coenzyme F420H2:NADP+ o 99.5 1.2E-13 4.3E-18 129.0 16.0 186 2-227 1-200 (212)
77 2rcy_A Pyrroline carboxylate r 99.5 3.2E-13 1.1E-17 130.4 18.4 189 1-253 4-200 (262)
78 1yqg_A Pyrroline-5-carboxylate 99.5 1.9E-13 6.4E-18 132.1 16.0 190 2-252 1-197 (263)
79 3c7a_A Octopine dehydrogenase; 99.5 2.6E-12 8.8E-17 132.2 23.5 219 1-244 2-269 (404)
80 2raf_A Putative dinucleotide-b 99.4 7.4E-13 2.5E-17 123.9 13.6 155 1-222 19-190 (209)
81 3g17_A Similar to 2-dehydropan 99.4 1.4E-12 4.6E-17 128.6 13.7 192 2-244 3-217 (294)
82 3zwc_A Peroxisomal bifunctiona 99.4 2E-12 6.8E-17 141.6 14.4 204 1-252 316-529 (742)
83 4huj_A Uncharacterized protein 99.4 6.5E-13 2.2E-17 125.3 8.8 165 1-214 23-204 (220)
84 2vns_A Metalloreductase steap3 99.3 2.5E-11 8.7E-16 113.9 14.0 172 1-220 28-206 (215)
85 1np3_A Ketol-acid reductoisome 99.3 2.1E-11 7.2E-16 122.4 12.7 195 1-247 16-223 (338)
86 3ego_A Probable 2-dehydropanto 99.2 2.1E-11 7.3E-16 120.8 11.0 203 1-240 2-226 (307)
87 2i76_A Hypothetical protein; N 99.2 8E-12 2.7E-16 121.9 7.2 183 1-245 2-190 (276)
88 2gcg_A Glyoxylate reductase/hy 99.2 1.1E-10 3.6E-15 116.9 14.0 134 2-176 156-292 (330)
89 2dbq_A Glyoxylate reductase; D 99.2 8.2E-11 2.8E-15 117.9 11.3 132 2-176 151-285 (334)
90 3dfu_A Uncharacterized protein 99.2 8.5E-10 2.9E-14 104.1 16.5 155 1-239 6-162 (232)
91 1guz_A Malate dehydrogenase; o 99.1 2.3E-10 7.9E-15 113.4 12.3 122 2-137 1-127 (310)
92 2yjz_A Metalloreductase steap4 98.7 5.1E-12 1.7E-16 117.5 0.0 166 2-218 20-192 (201)
93 2w2k_A D-mandelate dehydrogena 99.1 1.8E-10 6E-15 116.0 10.1 109 2-144 164-273 (348)
94 1pzg_A LDH, lactate dehydrogen 99.1 1.3E-09 4.5E-14 108.9 14.7 124 2-137 10-141 (331)
95 3gvx_A Glycerate dehydrogenase 99.0 4.7E-10 1.6E-14 109.7 9.0 105 2-145 123-227 (290)
96 1t2d_A LDH-P, L-lactate dehydr 99.0 2.4E-09 8.1E-14 106.6 13.8 122 2-136 5-134 (322)
97 3ba1_A HPPR, hydroxyphenylpyru 99.0 1.3E-09 4.5E-14 108.9 11.1 104 2-144 165-268 (333)
98 2hjr_A Malate dehydrogenase; m 99.0 4.5E-09 1.5E-13 104.9 14.9 117 2-135 15-138 (328)
99 1hyh_A L-hicdh, L-2-hydroxyiso 99.0 3.6E-09 1.2E-13 104.8 13.6 118 1-136 1-130 (309)
100 3gg9_A D-3-phosphoglycerate de 99.0 4.3E-09 1.5E-13 105.8 14.1 109 2-145 161-269 (352)
101 2d0i_A Dehydrogenase; structur 99.0 2.6E-09 8.9E-14 106.8 12.1 132 2-177 147-282 (333)
102 1ur5_A Malate dehydrogenase; o 99.0 4.7E-09 1.6E-13 103.9 13.5 120 1-137 2-128 (309)
103 1gdh_A D-glycerate dehydrogena 98.9 4.9E-09 1.7E-13 104.3 12.5 108 2-144 147-255 (320)
104 2ekl_A D-3-phosphoglycerate de 98.9 4.2E-09 1.4E-13 104.4 10.9 107 2-144 143-249 (313)
105 1wwk_A Phosphoglycerate dehydr 98.9 1.1E-08 3.9E-13 101.0 13.8 107 2-144 143-249 (307)
106 3jtm_A Formate dehydrogenase, 98.9 3.4E-09 1.1E-13 106.5 10.0 109 2-144 165-273 (351)
107 4g2n_A D-isomer specific 2-hyd 98.9 1.3E-08 4.4E-13 102.0 13.8 107 2-144 174-280 (345)
108 3evt_A Phosphoglycerate dehydr 98.9 2.7E-09 9.3E-14 106.0 8.3 107 2-144 138-244 (324)
109 1a5z_A L-lactate dehydrogenase 98.9 1.9E-08 6.3E-13 100.1 14.2 117 2-136 1-124 (319)
110 1lld_A L-lactate dehydrogenase 98.9 1.6E-08 5.5E-13 100.3 13.7 117 1-138 7-134 (319)
111 4dgs_A Dehydrogenase; structur 98.9 9.1E-09 3.1E-13 102.8 11.5 104 2-144 172-275 (340)
112 1ygy_A PGDH, D-3-phosphoglycer 98.8 2E-08 6.8E-13 106.6 14.1 106 2-144 143-249 (529)
113 1y6j_A L-lactate dehydrogenase 98.8 7.7E-09 2.6E-13 102.7 10.0 115 2-137 8-132 (318)
114 2g76_A 3-PGDH, D-3-phosphoglyc 98.8 3.3E-08 1.1E-12 98.7 14.5 107 2-144 166-272 (335)
115 1mx3_A CTBP1, C-terminal bindi 98.8 3.5E-08 1.2E-12 99.0 14.5 108 2-144 169-276 (347)
116 2ewd_A Lactate dehydrogenase,; 98.8 2.2E-08 7.7E-13 99.4 12.3 115 2-133 5-126 (317)
117 2nac_A NAD-dependent formate d 98.8 1.2E-08 4.3E-13 103.7 10.3 109 2-144 192-300 (393)
118 2v6b_A L-LDH, L-lactate dehydr 98.8 2.2E-08 7.6E-13 98.8 11.8 116 2-134 1-122 (304)
119 2pi1_A D-lactate dehydrogenase 98.8 6.9E-08 2.4E-12 96.4 15.2 106 2-144 142-247 (334)
120 3hg7_A D-isomer specific 2-hyd 98.8 3.4E-09 1.2E-13 105.2 5.6 107 2-144 141-247 (324)
121 1oju_A MDH, malate dehydrogena 98.8 7.7E-08 2.6E-12 94.3 15.2 118 2-136 1-126 (294)
122 4e5n_A Thermostable phosphite 98.8 5.4E-08 1.8E-12 97.0 14.1 108 2-144 146-253 (330)
123 1qp8_A Formate dehydrogenase; 98.8 2E-08 6.9E-13 99.0 10.6 103 2-144 125-227 (303)
124 4hy3_A Phosphoglycerate oxidor 98.8 7.8E-08 2.7E-12 96.9 15.0 107 2-144 177-283 (365)
125 2j6i_A Formate dehydrogenase; 98.8 3.7E-08 1.3E-12 99.6 12.0 109 2-144 165-274 (364)
126 3k5p_A D-3-phosphoglycerate de 98.8 4.6E-08 1.6E-12 99.9 12.8 105 2-144 157-261 (416)
127 3fr7_A Putative ketol-acid red 98.8 2.4E-08 8.2E-13 102.7 10.4 209 1-251 54-281 (525)
128 3d0o_A L-LDH 1, L-lactate dehy 98.7 8.6E-08 2.9E-12 95.1 13.7 119 2-136 7-131 (317)
129 2yq5_A D-isomer specific 2-hyd 98.7 1.1E-07 3.8E-12 95.0 14.5 106 2-145 149-254 (343)
130 1sc6_A PGDH, D-3-phosphoglycer 98.7 6E-08 2.1E-12 99.2 12.6 105 2-144 146-250 (404)
131 3pp8_A Glyoxylate/hydroxypyruv 98.7 1.1E-08 3.9E-13 101.2 6.5 107 2-144 140-246 (315)
132 3gvi_A Malate dehydrogenase; N 98.7 1.2E-07 4.2E-12 94.1 13.8 119 1-136 7-132 (324)
133 3pqe_A L-LDH, L-lactate dehydr 98.7 7.1E-08 2.4E-12 95.9 11.9 113 2-136 6-130 (326)
134 2cuk_A Glycerate dehydrogenase 98.7 4.7E-08 1.6E-12 96.7 10.0 100 2-142 145-244 (311)
135 1lss_A TRK system potassium up 98.7 1.6E-07 5.5E-12 80.6 11.6 126 2-169 5-135 (140)
136 2i99_A MU-crystallin homolog; 98.7 2.1E-08 7E-13 99.4 6.6 115 2-157 136-251 (312)
137 3ldh_A Lactate dehydrogenase; 98.6 2.7E-07 9.3E-12 91.5 13.7 119 1-136 21-146 (330)
138 3fi9_A Malate dehydrogenase; s 98.6 2.1E-07 7.3E-12 93.0 12.4 118 1-137 8-135 (343)
139 3p7m_A Malate dehydrogenase; p 98.6 4E-07 1.4E-11 90.3 13.7 119 1-136 5-130 (321)
140 1mld_A Malate dehydrogenase; o 98.6 3.3E-07 1.1E-11 90.7 12.9 113 2-137 1-126 (314)
141 3tl2_A Malate dehydrogenase; c 98.6 7.1E-07 2.4E-11 88.3 14.9 118 2-136 9-135 (315)
142 1j4a_A D-LDH, D-lactate dehydr 98.6 8.5E-08 2.9E-12 95.8 8.1 106 2-144 147-252 (333)
143 1smk_A Malate dehydrogenase, g 98.5 3.9E-07 1.3E-11 90.8 11.9 113 1-136 8-133 (326)
144 1ez4_A Lactate dehydrogenase; 98.5 6.8E-07 2.3E-11 88.6 13.5 117 2-136 6-129 (318)
145 1dxy_A D-2-hydroxyisocaproate 98.5 1.2E-07 4.1E-12 94.7 7.7 105 2-144 146-250 (333)
146 1obb_A Maltase, alpha-glucosid 98.5 5.8E-07 2E-11 93.6 12.9 79 2-88 4-87 (480)
147 1ldn_A L-lactate dehydrogenase 98.5 1.1E-06 3.7E-11 87.1 14.4 121 1-136 6-131 (316)
148 3oet_A Erythronate-4-phosphate 98.5 2.9E-07 9.9E-12 93.0 10.2 108 2-144 120-227 (381)
149 3nep_X Malate dehydrogenase; h 98.5 5.5E-07 1.9E-11 89.0 11.6 118 2-136 1-126 (314)
150 2o4c_A Erythronate-4-phosphate 98.5 1.9E-07 6.5E-12 94.5 8.3 108 2-144 117-224 (380)
151 1xdw_A NAD+-dependent (R)-2-hy 98.5 1.5E-07 5.2E-12 93.9 7.4 105 2-144 147-251 (331)
152 2xxj_A L-LDH, L-lactate dehydr 98.5 2.2E-06 7.6E-11 84.6 15.0 117 2-137 1-125 (310)
153 3ic5_A Putative saccharopine d 98.5 2.3E-07 8E-12 77.1 6.4 73 1-87 5-78 (118)
154 2zqz_A L-LDH, L-lactate dehydr 98.4 1E-06 3.4E-11 87.7 12.1 114 2-136 10-133 (326)
155 2dc1_A L-aspartate dehydrogena 98.4 7.8E-07 2.7E-11 84.3 10.2 96 2-144 1-101 (236)
156 4aj2_A L-lactate dehydrogenase 98.4 2.1E-06 7.1E-11 85.4 13.6 115 1-135 19-143 (331)
157 3oj0_A Glutr, glutamyl-tRNA re 98.4 2.3E-07 7.9E-12 80.8 5.9 70 2-89 22-91 (144)
158 1u8x_X Maltose-6'-phosphate gl 98.4 1.1E-06 3.7E-11 91.6 11.8 81 2-90 29-114 (472)
159 2hk9_A Shikimate dehydrogenase 98.4 8E-07 2.7E-11 86.3 9.9 93 2-128 130-222 (275)
160 2ho3_A Oxidoreductase, GFO/IDH 98.4 2.3E-06 7.8E-11 84.9 13.3 71 1-89 1-73 (325)
161 3vku_A L-LDH, L-lactate dehydr 98.4 1.8E-06 6.2E-11 85.7 12.2 116 2-135 10-132 (326)
162 2d4a_B Malate dehydrogenase; a 98.4 2.4E-06 8.3E-11 84.3 13.1 119 3-137 1-125 (308)
163 3euw_A MYO-inositol dehydrogen 98.4 1.5E-06 5.1E-11 86.9 11.7 70 1-89 4-76 (344)
164 4hkt_A Inositol 2-dehydrogenas 98.4 1.5E-06 5.1E-11 86.5 11.6 69 1-89 3-74 (331)
165 2rir_A Dipicolinate synthase, 98.4 2.1E-06 7.3E-11 84.3 12.4 95 2-133 158-252 (300)
166 2i6t_A Ubiquitin-conjugating e 98.4 2.6E-06 8.9E-11 83.8 12.6 111 1-133 14-130 (303)
167 3uuw_A Putative oxidoreductase 98.4 8.1E-07 2.8E-11 87.5 9.0 69 2-89 7-77 (308)
168 3d4o_A Dipicolinate synthase s 98.4 2.8E-06 9.7E-11 83.1 12.5 93 2-133 156-250 (293)
169 3ezy_A Dehydrogenase; structur 98.3 1.5E-06 5.1E-11 87.0 10.4 71 1-89 2-75 (344)
170 1y81_A Conserved hypothetical 98.3 9.9E-07 3.4E-11 76.5 7.7 98 2-145 15-116 (138)
171 2x0j_A Malate dehydrogenase; o 98.3 4.9E-06 1.7E-10 81.3 13.3 120 2-136 1-126 (294)
172 3q2i_A Dehydrogenase; rossmann 98.3 2E-06 6.8E-11 86.4 10.7 71 1-89 13-86 (354)
173 1b8p_A Protein (malate dehydro 98.3 4.8E-06 1.6E-10 82.9 13.3 116 2-137 6-142 (329)
174 2g1u_A Hypothetical protein TM 98.3 4.3E-06 1.5E-10 73.6 11.6 40 2-43 20-59 (155)
175 3db2_A Putative NADPH-dependen 98.3 2E-06 7E-11 86.4 9.3 70 2-90 6-78 (354)
176 3mz0_A Inositol 2-dehydrogenas 98.3 3.6E-06 1.2E-10 84.2 11.0 71 2-89 3-77 (344)
177 3llv_A Exopolyphosphatase-rela 98.3 4.2E-06 1.4E-10 72.3 10.0 43 1-45 6-48 (141)
178 3fef_A Putative glucosidase LP 98.3 3.3E-06 1.1E-10 87.2 10.9 76 2-88 6-85 (450)
179 2d5c_A AROE, shikimate 5-dehyd 98.3 1.7E-06 5.7E-11 83.4 8.1 103 3-143 118-220 (263)
180 1x7d_A Ornithine cyclodeaminas 98.2 4.4E-06 1.5E-10 83.9 11.2 103 2-133 130-232 (350)
181 3cea_A MYO-inositol 2-dehydrog 98.2 6E-06 2E-10 82.5 11.8 71 1-89 8-82 (346)
182 1s6y_A 6-phospho-beta-glucosid 98.2 3.6E-06 1.2E-10 87.2 10.3 81 2-90 8-95 (450)
183 3fwz_A Inner membrane protein 98.2 5.3E-06 1.8E-10 71.8 9.5 71 2-88 8-81 (140)
184 3e9m_A Oxidoreductase, GFO/IDH 98.2 2.5E-06 8.4E-11 84.9 8.2 70 2-89 6-78 (330)
185 2duw_A Putative COA-binding pr 98.2 1.4E-06 4.9E-11 76.2 5.6 100 2-145 14-117 (145)
186 3c1a_A Putative oxidoreductase 98.2 3.7E-06 1.3E-10 83.1 9.1 68 1-89 10-80 (315)
187 3e18_A Oxidoreductase; dehydro 98.1 9.6E-06 3.3E-10 81.7 11.5 68 2-89 6-76 (359)
188 3ec7_A Putative dehydrogenase; 98.1 4.8E-06 1.7E-10 83.8 9.1 71 2-89 24-98 (357)
189 1xea_A Oxidoreductase, GFO/IDH 98.1 4.5E-06 1.5E-10 82.7 8.5 71 1-89 2-74 (323)
190 3rc1_A Sugar 3-ketoreductase; 98.1 1E-05 3.6E-10 81.1 11.1 69 2-89 28-100 (350)
191 2hmt_A YUAA protein; RCK, KTN, 98.1 9.5E-06 3.2E-10 69.6 9.4 41 2-44 7-47 (144)
192 1v8b_A Adenosylhomocysteinase; 98.1 1.3E-05 4.5E-10 83.1 12.0 98 2-139 258-357 (479)
193 3qy9_A DHPR, dihydrodipicolina 98.1 7.5E-06 2.6E-10 77.8 9.1 107 1-159 3-110 (243)
194 3m2t_A Probable dehydrogenase; 98.1 1.2E-05 4E-10 81.1 11.0 70 2-89 6-79 (359)
195 3p2y_A Alanine dehydrogenase/p 98.1 5.5E-06 1.9E-10 83.5 8.5 110 2-128 185-303 (381)
196 4dio_A NAD(P) transhydrogenase 98.1 5.5E-06 1.9E-10 84.1 8.5 113 2-128 191-313 (405)
197 3f4l_A Putative oxidoreductase 98.1 2.9E-06 9.9E-11 85.0 6.4 71 1-89 2-76 (345)
198 1tlt_A Putative oxidoreductase 98.1 7.3E-06 2.5E-10 81.0 9.0 69 2-89 6-76 (319)
199 3c85_A Putative glutathione-re 98.1 7E-06 2.4E-10 74.2 8.1 72 2-88 40-115 (183)
200 4had_A Probable oxidoreductase 98.1 9.5E-06 3.3E-10 81.2 9.7 72 1-90 23-98 (350)
201 3e82_A Putative oxidoreductase 98.1 1.6E-05 5.6E-10 80.1 11.4 67 2-89 8-78 (364)
202 1omo_A Alanine dehydrogenase; 98.1 1.1E-05 3.9E-10 79.9 10.0 98 2-133 126-223 (322)
203 3d64_A Adenosylhomocysteinase; 98.1 1.5E-05 5.1E-10 83.1 11.3 91 2-131 278-368 (494)
204 1o6z_A MDH, malate dehydrogena 98.0 3.6E-05 1.2E-09 75.7 12.8 117 2-136 1-127 (303)
205 3l4b_C TRKA K+ channel protien 98.0 8E-06 2.7E-10 76.1 7.6 41 2-44 1-41 (218)
206 1ydw_A AX110P-like protein; st 98.0 2.2E-05 7.6E-10 78.9 11.5 74 1-89 6-82 (362)
207 2glx_A 1,5-anhydro-D-fructose 98.0 1.4E-05 4.8E-10 79.3 9.6 69 2-89 1-73 (332)
208 3evn_A Oxidoreductase, GFO/IDH 98.0 1.1E-05 3.7E-10 80.2 8.7 70 2-89 6-78 (329)
209 3hdj_A Probable ornithine cycl 98.0 7E-06 2.4E-10 81.1 7.0 98 2-133 122-219 (313)
210 3ohs_X Trans-1,2-dihydrobenzen 98.0 1.6E-05 5.3E-10 79.2 9.3 71 1-89 2-77 (334)
211 3hhp_A Malate dehydrogenase; M 98.0 6E-05 2.1E-09 74.3 13.0 115 2-137 1-127 (312)
212 2p2s_A Putative oxidoreductase 97.9 1.6E-05 5.4E-10 79.2 8.1 69 2-89 5-77 (336)
213 3bio_A Oxidoreductase, GFO/IDH 97.9 3.6E-05 1.2E-09 75.7 10.5 87 2-128 10-97 (304)
214 3ce6_A Adenosylhomocysteinase; 97.9 4.8E-05 1.7E-09 79.4 11.7 90 2-130 275-364 (494)
215 3kb6_A D-lactate dehydrogenase 97.9 9.4E-05 3.2E-09 73.6 13.3 106 2-144 142-247 (334)
216 2z2v_A Hypothetical protein PH 97.9 2E-05 6.7E-10 79.6 8.4 108 2-144 17-124 (365)
217 3kux_A Putative oxidoreductase 97.9 5.3E-05 1.8E-09 75.9 11.5 68 2-90 8-79 (352)
218 3gdo_A Uncharacterized oxidore 97.9 4.3E-05 1.5E-09 76.8 10.9 68 2-90 6-77 (358)
219 2egg_A AROE, shikimate 5-dehyd 97.9 2.4E-05 8.3E-10 76.7 8.7 112 2-143 142-254 (297)
220 3h9u_A Adenosylhomocysteinase; 97.9 3.5E-05 1.2E-09 78.7 9.9 90 2-130 212-301 (436)
221 3moi_A Probable dehydrogenase; 97.9 2.4E-05 8.1E-10 79.6 8.3 70 1-89 2-75 (387)
222 2ixa_A Alpha-N-acetylgalactosa 97.8 7.3E-05 2.5E-09 77.4 11.6 75 2-89 21-102 (444)
223 1leh_A Leucine dehydrogenase; 97.8 2.7E-05 9.4E-10 78.3 7.9 111 2-159 174-285 (364)
224 1h6d_A Precursor form of gluco 97.8 2.8E-05 9.5E-10 80.4 7.4 73 2-89 84-161 (433)
225 3abi_A Putative uncharacterize 97.8 2.7E-05 9.2E-10 78.5 6.9 71 2-88 17-87 (365)
226 1zh8_A Oxidoreductase; TM0312, 97.8 8E-05 2.8E-09 74.2 10.3 71 2-89 19-93 (340)
227 2vhw_A Alanine dehydrogenase; 97.8 3.9E-05 1.3E-09 77.7 8.0 97 2-127 169-268 (377)
228 4f3y_A DHPR, dihydrodipicolina 97.8 3.2E-05 1.1E-09 74.6 6.6 74 1-87 7-82 (272)
229 3u95_A Glycoside hydrolase, fa 97.7 0.00024 8.3E-09 74.0 13.5 78 2-87 1-85 (477)
230 3n58_A Adenosylhomocysteinase; 97.7 0.00015 5E-09 74.1 11.2 90 2-130 248-337 (464)
231 4gmf_A Yersiniabactin biosynth 97.7 6.3E-05 2.2E-09 76.0 8.1 71 2-91 8-79 (372)
232 3v5n_A Oxidoreductase; structu 97.7 9.9E-05 3.4E-09 75.8 9.6 72 2-90 38-122 (417)
233 3u3x_A Oxidoreductase; structu 97.7 0.00022 7.4E-09 71.8 11.7 69 2-89 27-99 (361)
234 3don_A Shikimate dehydrogenase 97.7 5.3E-05 1.8E-09 73.4 6.8 98 2-133 118-216 (277)
235 3dty_A Oxidoreductase, GFO/IDH 97.7 5.8E-05 2E-09 77.0 7.5 72 2-89 13-96 (398)
236 1f06_A MESO-diaminopimelate D- 97.7 5.2E-05 1.8E-09 75.1 6.8 65 2-89 4-69 (320)
237 3fhl_A Putative oxidoreductase 97.7 8.4E-05 2.9E-09 74.7 8.5 67 2-89 6-76 (362)
238 3u62_A Shikimate dehydrogenase 97.7 6.4E-05 2.2E-09 71.9 6.9 67 3-89 110-177 (253)
239 3gvp_A Adenosylhomocysteinase 97.6 0.00029 1E-08 71.8 11.7 90 2-130 221-310 (435)
240 3upl_A Oxidoreductase; rossman 97.6 0.00027 9.2E-09 72.6 11.3 87 2-89 24-118 (446)
241 5mdh_A Malate dehydrogenase; o 97.6 0.00036 1.2E-08 69.4 11.6 115 2-136 4-137 (333)
242 4h7p_A Malate dehydrogenase; s 97.6 0.00066 2.3E-08 67.6 13.5 115 3-135 26-157 (345)
243 2eez_A Alanine dehydrogenase; 97.6 0.00013 4.6E-09 73.5 8.5 99 2-129 167-268 (369)
244 4gqa_A NAD binding oxidoreduct 97.6 0.00013 4.5E-09 74.6 8.5 71 2-89 27-107 (412)
245 3l9w_A Glutathione-regulated p 97.6 7.5E-05 2.6E-09 76.5 6.3 71 2-88 5-78 (413)
246 4gbj_A 6-phosphogluconate dehy 97.6 0.00015 5E-09 71.0 8.1 110 325-466 6-122 (297)
247 1id1_A Putative potassium chan 97.5 0.00019 6.6E-09 62.6 8.0 40 2-43 4-44 (153)
248 2nvw_A Galactose/lactose metab 97.5 0.00028 9.7E-09 73.7 10.6 73 2-89 40-119 (479)
249 3o9z_A Lipopolysaccaride biosy 97.5 0.00018 6.2E-09 70.9 8.6 69 1-89 3-83 (312)
250 3oa2_A WBPB; oxidoreductase, s 97.5 0.00019 6.4E-09 70.9 8.5 69 1-89 3-84 (318)
251 1hye_A L-lactate/malate dehydr 97.5 0.0013 4.3E-08 64.8 14.3 117 2-136 1-130 (313)
252 1x13_A NAD(P) transhydrogenase 97.5 0.00023 7.9E-09 72.6 9.3 41 2-44 173-213 (401)
253 3d4o_A Dipicolinate synthase s 97.5 0.0013 4.4E-08 64.1 14.2 119 311-465 142-265 (293)
254 1up7_A 6-phospho-beta-glucosid 97.5 0.00085 2.9E-08 68.7 13.2 78 1-89 2-84 (417)
255 3i23_A Oxidoreductase, GFO/IDH 97.5 0.00041 1.4E-08 69.3 10.6 71 1-89 2-76 (349)
256 3ew7_A LMO0794 protein; Q8Y8U8 97.5 0.00062 2.1E-08 62.5 11.1 71 2-89 1-72 (221)
257 3jtm_A Formate dehydrogenase, 97.5 0.00048 1.6E-08 68.9 10.9 104 321-456 161-267 (351)
258 3oqb_A Oxidoreductase; structu 97.5 0.00025 8.6E-09 71.7 9.0 71 2-90 7-95 (383)
259 3gg9_A D-3-phosphoglycerate de 97.5 0.0003 1E-08 70.5 9.1 101 320-453 156-259 (352)
260 3btv_A Galactose/lactose metab 97.5 0.00024 8.1E-09 73.4 8.7 73 2-89 21-100 (438)
261 1dih_A Dihydrodipicolinate red 97.5 8.2E-05 2.8E-09 71.9 4.9 73 2-86 6-80 (273)
262 3h2s_A Putative NADH-flavin re 97.5 0.0015 5.2E-08 60.1 13.5 71 2-88 1-72 (224)
263 4g2n_A D-isomer specific 2-hyd 97.5 0.00053 1.8E-08 68.4 10.8 103 320-456 169-274 (345)
264 3ius_A Uncharacterized conserv 97.4 0.0003 1E-08 67.6 8.5 69 1-88 5-73 (286)
265 4hy3_A Phosphoglycerate oxidor 97.4 0.00073 2.5E-08 67.8 11.5 102 320-455 172-276 (365)
266 1gpj_A Glutamyl-tRNA reductase 97.4 0.00059 2E-08 69.7 10.9 70 2-89 168-238 (404)
267 4h3v_A Oxidoreductase domain p 97.4 0.00023 8E-09 71.6 7.4 70 3-90 8-87 (390)
268 1iuk_A Hypothetical protein TT 97.4 0.00022 7.5E-09 61.7 5.9 99 2-144 14-116 (140)
269 3phh_A Shikimate dehydrogenase 97.4 0.00038 1.3E-08 66.9 8.0 96 2-133 119-214 (269)
270 2w2k_A D-mandelate dehydrogena 97.3 0.00095 3.3E-08 66.7 11.2 105 319-455 158-266 (348)
271 2czc_A Glyceraldehyde-3-phosph 97.3 0.00018 6E-09 71.7 5.5 85 2-88 3-89 (334)
272 1b7g_O Protein (glyceraldehyde 97.3 0.00068 2.3E-08 67.6 9.5 84 1-88 1-87 (340)
273 3r6d_A NAD-dependent epimerase 97.3 0.00029 1E-08 65.1 6.4 73 1-87 4-82 (221)
274 4e5n_A Thermostable phosphite 97.3 0.00071 2.4E-08 67.1 9.6 102 321-455 142-246 (330)
275 1cf2_P Protein (glyceraldehyde 97.3 0.00016 5.3E-09 72.1 4.7 86 1-88 1-88 (337)
276 4e21_A 6-phosphogluconate dehy 97.3 0.00066 2.3E-08 68.2 9.2 112 323-467 21-141 (358)
277 3eag_A UDP-N-acetylmuramate:L- 97.3 0.0023 8E-08 63.2 13.2 115 1-145 4-134 (326)
278 2d59_A Hypothetical protein PH 97.3 0.00061 2.1E-08 59.1 7.8 97 2-144 23-123 (144)
279 4fb5_A Probable oxidoreductase 97.3 0.00028 9.5E-09 71.2 6.4 71 3-90 27-106 (393)
280 3pef_A 6-phosphogluconate dehy 97.3 0.00089 3E-08 64.8 9.6 108 325-464 2-118 (287)
281 2b0j_A 5,10-methenyltetrahydro 97.3 0.0086 2.9E-07 56.9 15.6 113 64-205 127-240 (358)
282 1l7d_A Nicotinamide nucleotide 97.2 0.00081 2.8E-08 68.2 9.4 41 2-44 173-213 (384)
283 4ew6_A D-galactose-1-dehydroge 97.2 0.00082 2.8E-08 66.6 9.2 61 2-88 26-91 (330)
284 3ulk_A Ketol-acid reductoisome 97.2 0.002 7E-08 65.3 11.9 90 2-128 38-133 (491)
285 2rir_A Dipicolinate synthase, 97.2 0.0085 2.9E-07 58.3 16.3 112 318-465 151-267 (300)
286 4dll_A 2-hydroxy-3-oxopropiona 97.2 0.0012 4E-08 65.2 10.1 109 323-464 30-147 (320)
287 3gvx_A Glycerate dehydrogenase 97.2 0.00087 3E-08 65.2 9.0 97 321-454 119-218 (290)
288 2gcg_A Glyoxylate reductase/hy 97.2 0.0013 4.5E-08 65.2 10.4 101 320-453 151-254 (330)
289 1pjc_A Protein (L-alanine dehy 97.2 0.0015 5E-08 65.7 10.8 101 2-132 168-272 (361)
290 3ijp_A DHPR, dihydrodipicolina 97.2 0.00054 1.8E-08 66.4 7.3 74 1-86 21-96 (288)
291 1mx3_A CTBP1, C-terminal bindi 97.2 0.0012 4E-08 66.0 9.9 102 321-455 165-269 (347)
292 3qha_A Putative oxidoreductase 97.2 0.0015 5.2E-08 63.6 10.4 107 324-464 15-128 (296)
293 2dbq_A Glyoxylate reductase; D 97.2 0.0018 6.2E-08 64.3 11.1 95 320-448 146-241 (334)
294 2nac_A NAD-dependent formate d 97.2 0.0016 5.3E-08 66.1 10.6 103 320-454 187-292 (393)
295 3obb_A Probable 3-hydroxyisobu 97.2 0.00056 1.9E-08 67.0 7.1 109 325-465 4-121 (300)
296 3dhn_A NAD-dependent epimerase 97.2 0.0002 7E-09 66.3 3.7 73 1-88 4-77 (227)
297 2g76_A 3-PGDH, D-3-phosphoglyc 97.2 0.0022 7.7E-08 63.6 11.4 100 320-453 161-263 (335)
298 4dgs_A Dehydrogenase; structur 97.1 0.0015 5.3E-08 64.9 10.0 97 320-453 167-266 (340)
299 2d0i_A Dehydrogenase; structur 97.1 0.0018 6.2E-08 64.2 10.5 97 321-452 143-242 (333)
300 1wwk_A Phosphoglycerate dehydr 97.1 0.0025 8.5E-08 62.5 11.3 99 321-453 139-240 (307)
301 2aef_A Calcium-gated potassium 97.1 0.00035 1.2E-08 65.5 4.9 68 2-88 10-81 (234)
302 1y7t_A Malate dehydrogenase; N 97.1 0.0029 1E-07 62.5 11.9 74 2-90 5-92 (327)
303 1ff9_A Saccharopine reductase; 97.1 0.0011 3.8E-08 68.6 9.1 75 2-88 4-78 (450)
304 3dr3_A N-acetyl-gamma-glutamyl 97.1 0.00073 2.5E-08 67.1 7.4 34 1-35 4-38 (337)
305 1nvm_B Acetaldehyde dehydrogen 97.1 0.00048 1.6E-08 67.8 6.0 70 2-88 5-81 (312)
306 1gdh_A D-glycerate dehydrogena 97.1 0.002 6.7E-08 63.6 10.4 100 321-453 143-246 (320)
307 3o8q_A Shikimate 5-dehydrogena 97.1 0.00061 2.1E-08 66.0 6.5 103 2-137 127-230 (281)
308 3lk7_A UDP-N-acetylmuramoylala 97.1 0.004 1.4E-07 64.4 13.0 114 2-145 10-138 (451)
309 3e8x_A Putative NAD-dependent 97.1 0.00089 3E-08 62.5 7.4 71 2-88 22-94 (236)
310 2pi1_A D-lactate dehydrogenase 97.1 0.0017 5.7E-08 64.5 9.7 101 321-456 138-241 (334)
311 3jyo_A Quinate/shikimate dehyd 97.1 0.005 1.7E-07 59.6 12.8 75 2-89 128-205 (283)
312 1nyt_A Shikimate 5-dehydrogena 97.1 0.0021 7.2E-08 61.8 10.1 100 2-133 120-220 (271)
313 3dqp_A Oxidoreductase YLBE; al 97.1 0.00078 2.7E-08 62.1 6.7 104 2-127 1-106 (219)
314 3qvo_A NMRA family protein; st 97.1 0.00068 2.3E-08 63.5 6.3 74 1-88 23-98 (236)
315 2yq5_A D-isomer specific 2-hyd 97.1 0.0016 5.4E-08 64.9 9.3 98 321-455 145-246 (343)
316 2axq_A Saccharopine dehydrogen 97.1 0.00096 3.3E-08 69.4 8.0 76 1-88 23-98 (467)
317 2j6i_A Formate dehydrogenase; 97.1 0.0019 6.4E-08 65.0 9.8 104 320-455 160-267 (364)
318 7mdh_A Protein (malate dehydro 97.1 0.0035 1.2E-07 62.9 11.7 115 2-136 33-166 (375)
319 1ygy_A PGDH, D-3-phosphoglycer 97.0 0.0019 6.4E-08 68.3 10.1 100 320-453 138-240 (529)
320 2ekl_A D-3-phosphoglycerate de 97.0 0.0031 1.1E-07 62.0 10.8 100 320-453 138-240 (313)
321 4g65_A TRK system potassium up 97.0 0.00053 1.8E-08 71.2 5.5 41 2-44 4-44 (461)
322 2nu8_A Succinyl-COA ligase [AD 97.0 0.0021 7.1E-08 62.5 9.3 65 2-89 8-75 (288)
323 3doj_A AT3G25530, dehydrogenas 97.0 0.0013 4.4E-08 64.5 7.8 110 323-464 20-138 (310)
324 1lc0_A Biliverdin reductase A; 97.0 0.0014 4.6E-08 63.9 7.8 65 1-89 7-76 (294)
325 3ba1_A HPPR, hydroxyphenylpyru 97.0 0.0026 9E-08 63.1 9.9 93 320-449 160-253 (333)
326 1sc6_A PGDH, D-3-phosphoglycer 97.0 0.0027 9.1E-08 64.7 9.9 98 320-453 141-241 (404)
327 2vt3_A REX, redox-sensing tran 96.9 0.0003 1E-08 65.3 2.5 67 2-88 86-155 (215)
328 1y81_A Conserved hypothetical 96.9 0.0034 1.2E-07 54.0 8.8 106 323-464 13-121 (138)
329 1u8f_O GAPDH, glyceraldehyde-3 96.9 0.0035 1.2E-07 62.2 10.1 42 2-44 4-48 (335)
330 3ond_A Adenosylhomocysteinase; 96.9 0.0029 1E-07 65.5 9.8 88 2-128 266-353 (488)
331 3evt_A Phosphoglycerate dehydr 96.9 0.0019 6.5E-08 63.8 8.1 103 320-456 133-238 (324)
332 3k5p_A D-3-phosphoglycerate de 96.9 0.0032 1.1E-07 64.1 9.6 99 321-455 153-254 (416)
333 3kb6_A D-lactate dehydrogenase 96.9 0.0037 1.3E-07 62.1 9.7 101 320-456 137-241 (334)
334 3ip3_A Oxidoreductase, putativ 96.8 0.0011 3.9E-08 65.7 6.0 73 1-89 2-78 (337)
335 3ngx_A Bifunctional protein fo 96.8 0.0038 1.3E-07 59.8 9.2 72 2-128 151-223 (276)
336 1p77_A Shikimate 5-dehydrogena 96.8 0.0013 4.3E-08 63.4 6.0 104 2-137 120-224 (272)
337 3qsg_A NAD-binding phosphogluc 96.8 0.0031 1E-07 61.9 8.7 108 324-464 24-142 (312)
338 3pdu_A 3-hydroxyisobutyrate de 96.8 0.0014 4.8E-08 63.4 6.1 108 325-464 2-118 (287)
339 2h78_A Hibadh, 3-hydroxyisobut 96.8 0.0023 7.8E-08 62.3 7.5 107 325-464 4-120 (302)
340 4gwg_A 6-phosphogluconate dehy 96.8 0.0038 1.3E-07 65.0 9.5 116 324-467 4-129 (484)
341 1hdo_A Biliverdin IX beta redu 96.8 0.0027 9.2E-08 57.3 7.4 73 2-88 4-77 (206)
342 1qp8_A Formate dehydrogenase; 96.7 0.0041 1.4E-07 60.8 8.9 95 321-453 121-218 (303)
343 2zyd_A 6-phosphogluconate dehy 96.7 0.0047 1.6E-07 64.4 9.8 117 321-466 12-138 (480)
344 2yyy_A Glyceraldehyde-3-phosph 96.7 0.0035 1.2E-07 62.4 8.3 87 1-88 2-91 (343)
345 3l6d_A Putative oxidoreductase 96.7 0.0051 1.7E-07 60.1 9.3 111 322-465 7-125 (306)
346 3h9u_A Adenosylhomocysteinase; 96.7 0.0092 3.1E-07 60.9 11.3 116 315-466 202-320 (436)
347 3hg7_A D-isomer specific 2-hyd 96.7 0.0016 5.4E-08 64.3 5.6 100 321-455 137-240 (324)
348 1edz_A 5,10-methylenetetrahydr 96.7 0.0013 4.3E-08 64.7 4.8 73 2-89 178-256 (320)
349 4ina_A Saccharopine dehydrogen 96.7 0.0016 5.5E-08 66.4 5.8 42 1-44 1-45 (405)
350 3g0o_A 3-hydroxyisobutyrate de 96.7 0.0017 5.8E-08 63.4 5.6 109 324-464 7-125 (303)
351 1p9l_A Dihydrodipicolinate red 96.7 0.0073 2.5E-07 57.1 9.8 32 2-34 1-34 (245)
352 1a4i_A Methylenetetrahydrofola 96.6 0.007 2.4E-07 58.6 9.7 73 2-129 166-239 (301)
353 1jw9_B Molybdopterin biosynthe 96.6 0.0036 1.2E-07 59.4 7.4 33 2-36 32-65 (249)
354 3dtt_A NADP oxidoreductase; st 96.6 0.0035 1.2E-07 59.2 7.3 100 321-450 16-127 (245)
355 3pwz_A Shikimate dehydrogenase 96.6 0.013 4.5E-07 56.3 11.4 102 2-137 121-224 (272)
356 4a26_A Putative C-1-tetrahydro 96.6 0.0061 2.1E-07 59.1 8.8 72 2-128 166-240 (300)
357 3do5_A HOM, homoserine dehydro 96.5 0.0057 2E-07 60.4 8.5 118 1-144 2-133 (327)
358 1j4a_A D-LDH, D-lactate dehydr 96.5 0.007 2.4E-07 60.0 9.2 100 321-455 143-245 (333)
359 1b0a_A Protein (fold bifunctio 96.5 0.0075 2.6E-07 58.1 9.0 71 2-127 160-231 (288)
360 3m2p_A UDP-N-acetylglucosamine 96.5 0.0049 1.7E-07 59.8 7.9 70 1-88 2-72 (311)
361 3oet_A Erythronate-4-phosphate 96.5 0.0056 1.9E-07 61.6 8.4 99 319-455 114-220 (381)
362 3pp8_A Glyoxylate/hydroxypyruv 96.5 0.0046 1.6E-07 60.8 7.7 103 320-456 135-240 (315)
363 1j5p_A Aspartate dehydrogenase 96.5 0.0049 1.7E-07 58.4 7.4 79 2-128 13-92 (253)
364 2p4q_A 6-phosphogluconate dehy 96.5 0.0084 2.9E-07 62.7 9.9 115 324-466 10-134 (497)
365 3e5r_O PP38, glyceraldehyde-3- 96.5 0.0063 2.2E-07 60.4 8.5 41 2-43 4-47 (337)
366 3mtj_A Homoserine dehydrogenas 96.5 0.0066 2.3E-07 62.4 8.8 66 3-88 12-88 (444)
367 1oi7_A Succinyl-COA synthetase 96.5 0.0078 2.7E-07 58.4 8.8 104 2-144 8-114 (288)
368 3e48_A Putative nucleoside-dip 96.5 0.002 7E-08 61.8 4.6 74 2-88 1-75 (289)
369 4ezb_A Uncharacterized conserv 96.4 0.007 2.4E-07 59.5 8.4 108 325-464 25-144 (317)
370 3p2o_A Bifunctional protein fo 96.4 0.011 3.9E-07 56.8 9.5 71 2-127 161-232 (285)
371 1dxy_A D-2-hydroxyisocaproate 96.4 0.0084 2.9E-07 59.4 9.0 100 320-456 141-244 (333)
372 3ggo_A Prephenate dehydrogenas 96.4 0.01 3.5E-07 58.3 9.5 98 323-451 32-132 (314)
373 4a7p_A UDP-glucose dehydrogena 96.4 0.015 5.2E-07 59.9 11.1 111 323-451 7-133 (446)
374 3l07_A Bifunctional protein fo 96.4 0.012 4.3E-07 56.5 9.7 71 2-127 162-233 (285)
375 4a5o_A Bifunctional protein fo 96.4 0.013 4.6E-07 56.3 9.7 73 2-129 162-235 (286)
376 2dt5_A AT-rich DNA-binding pro 96.4 0.00075 2.5E-08 62.5 0.9 68 2-88 81-150 (211)
377 2duw_A Putative COA-binding pr 96.3 0.0035 1.2E-07 54.4 5.0 107 324-464 13-122 (145)
378 2cuk_A Glycerate dehydrogenase 96.3 0.0091 3.1E-07 58.6 8.5 93 321-453 141-237 (311)
379 3d1l_A Putative NADP oxidoredu 96.3 0.0064 2.2E-07 57.9 7.2 102 323-456 9-111 (266)
380 1npy_A Hypothetical shikimate 96.3 0.0049 1.7E-07 59.3 6.2 67 2-90 120-187 (271)
381 4hv4_A UDP-N-acetylmuramate--L 96.3 0.022 7.5E-07 59.5 11.7 113 2-145 23-148 (494)
382 2ozp_A N-acetyl-gamma-glutamyl 96.3 0.004 1.4E-07 62.1 5.7 33 1-34 4-37 (345)
383 1vpd_A Tartronate semialdehyde 96.3 0.0079 2.7E-07 58.2 7.8 108 325-464 6-122 (299)
384 1vkn_A N-acetyl-gamma-glutamyl 96.2 0.0077 2.6E-07 60.0 7.5 95 1-129 13-109 (351)
385 1ys4_A Aspartate-semialdehyde 96.2 0.0065 2.2E-07 60.8 7.0 31 2-33 9-40 (354)
386 3gg2_A Sugar dehydrogenase, UD 96.2 0.017 6E-07 59.6 10.4 109 325-451 3-126 (450)
387 4e12_A Diketoreductase; oxidor 96.2 0.022 7.4E-07 54.9 10.4 121 324-456 4-130 (283)
388 3fbt_A Chorismate mutase and s 96.2 0.0071 2.4E-07 58.4 6.8 66 2-89 123-189 (282)
389 1np3_A Ketol-acid reductoisome 96.2 0.0058 2E-07 60.7 6.4 92 323-448 15-108 (338)
390 3d64_A Adenosylhomocysteinase; 96.2 0.025 8.6E-07 58.8 11.3 101 319-455 272-375 (494)
391 1v8b_A Adenosylhomocysteinase; 96.2 0.042 1.4E-06 56.9 12.9 103 319-457 252-357 (479)
392 1nvt_A Shikimate 5'-dehydrogen 96.2 0.0062 2.1E-07 58.9 6.4 108 2-133 129-236 (287)
393 2dpo_A L-gulonate 3-dehydrogen 96.2 0.019 6.4E-07 56.5 9.9 122 324-457 6-133 (319)
394 2o4c_A Erythronate-4-phosphate 96.2 0.0053 1.8E-07 61.8 6.0 99 319-455 111-217 (380)
395 1xdw_A NAD+-dependent (R)-2-hy 96.2 0.012 4.1E-07 58.3 8.3 98 321-455 143-244 (331)
396 4hb9_A Similarities with proba 96.1 0.0034 1.2E-07 63.0 4.5 33 2-36 2-34 (412)
397 3gvp_A Adenosylhomocysteinase 96.1 0.061 2.1E-06 54.7 13.5 118 314-467 210-330 (435)
398 2iz1_A 6-phosphogluconate dehy 96.1 0.016 5.4E-07 60.3 9.4 113 324-466 5-128 (474)
399 2izz_A Pyrroline-5-carboxylate 96.1 0.02 7E-07 56.2 9.7 100 324-456 22-127 (322)
400 2yv1_A Succinyl-COA ligase [AD 96.1 0.018 6E-07 56.0 9.1 105 2-145 14-121 (294)
401 2g5c_A Prephenate dehydrogenas 96.1 0.018 6.2E-07 55.1 9.0 96 325-451 2-100 (281)
402 3cky_A 2-hydroxymethyl glutara 96.1 0.014 4.9E-07 56.4 8.4 109 324-464 4-121 (301)
403 4b4o_A Epimerase family protei 96.0 0.015 5E-07 56.1 8.2 33 2-36 1-34 (298)
404 1xyg_A Putative N-acetyl-gamma 96.0 0.0045 1.5E-07 62.0 4.6 32 2-34 17-49 (359)
405 3gpi_A NAD-dependent epimerase 96.0 0.0025 8.6E-08 61.1 2.5 36 1-38 3-38 (286)
406 2jl1_A Triphenylmethane reduct 96.0 0.0037 1.3E-07 59.7 3.7 74 2-87 1-75 (287)
407 1y1p_A ARII, aldehyde reductas 96.0 0.0074 2.5E-07 59.0 5.9 40 2-43 12-52 (342)
408 3n58_A Adenosylhomocysteinase; 96.0 0.057 2E-06 55.1 12.5 103 310-448 233-335 (464)
409 1qyc_A Phenylcoumaran benzylic 96.0 0.0059 2E-07 59.0 5.1 73 1-87 4-86 (308)
410 3pid_A UDP-glucose 6-dehydroge 96.0 0.025 8.5E-07 57.9 9.9 106 323-451 35-157 (432)
411 2pgd_A 6-phosphogluconate dehy 96.0 0.025 8.6E-07 58.9 10.1 114 325-466 3-126 (482)
412 1xq6_A Unknown protein; struct 95.9 0.0086 2.9E-07 55.7 5.9 74 1-87 4-78 (253)
413 1qyd_A Pinoresinol-lariciresin 95.9 0.0072 2.5E-07 58.5 5.6 74 1-88 4-86 (313)
414 2nqt_A N-acetyl-gamma-glutamyl 95.9 0.0072 2.5E-07 60.3 5.6 32 1-33 9-46 (352)
415 3h2z_A Mannitol-1-phosphate 5- 95.9 0.0095 3.2E-07 60.1 6.4 82 2-87 1-88 (382)
416 2x4g_A Nucleoside-diphosphate- 95.9 0.003 1E-07 62.0 2.5 73 1-87 13-86 (342)
417 2gas_A Isoflavone reductase; N 95.9 0.0053 1.8E-07 59.3 4.1 74 1-88 2-86 (307)
418 2ejw_A HDH, homoserine dehydro 95.9 0.0029 9.9E-08 62.7 2.3 64 2-88 4-76 (332)
419 3tnl_A Shikimate dehydrogenase 95.8 0.03 1E-06 54.9 9.5 74 2-89 155-237 (315)
420 1lnq_A MTHK channels, potassiu 95.8 0.0024 8.1E-08 63.3 1.5 68 2-87 116-186 (336)
421 2gf2_A Hibadh, 3-hydroxyisobut 95.8 0.018 6E-07 55.6 7.7 92 326-450 2-97 (296)
422 2ep5_A 350AA long hypothetical 95.8 0.01 3.5E-07 59.2 6.1 32 1-33 4-36 (350)
423 3c1o_A Eugenol synthase; pheny 95.8 0.006 2E-07 59.4 4.2 73 1-87 4-86 (321)
424 1mv8_A GMD, GDP-mannose 6-dehy 95.8 0.036 1.2E-06 56.9 10.2 108 326-451 2-127 (436)
425 2yv2_A Succinyl-COA synthetase 95.8 0.031 1.1E-06 54.4 9.2 104 2-144 14-121 (297)
426 2c2x_A Methylenetetrahydrofola 95.8 0.029 9.9E-07 53.8 8.7 74 2-128 159-233 (281)
427 3hn7_A UDP-N-acetylmuramate-L- 95.8 0.091 3.1E-06 55.2 13.5 114 2-145 20-148 (524)
428 4dpk_A Malonyl-COA/succinyl-CO 95.7 0.0045 1.5E-07 62.0 3.0 31 2-33 8-39 (359)
429 4dpl_A Malonyl-COA/succinyl-CO 95.7 0.0045 1.5E-07 62.0 3.0 31 2-33 8-39 (359)
430 2r00_A Aspartate-semialdehyde 95.7 0.0059 2E-07 60.6 3.8 33 1-33 3-37 (336)
431 3k96_A Glycerol-3-phosphate de 95.7 0.036 1.2E-06 55.4 9.4 110 324-452 29-138 (356)
432 2f00_A UDP-N-acetylmuramate--L 95.6 0.09 3.1E-06 54.8 12.4 117 1-145 19-145 (491)
433 3cps_A Glyceraldehyde 3-phosph 95.6 0.026 9E-07 56.1 7.9 32 1-33 17-48 (354)
434 3cmc_O GAPDH, glyceraldehyde-3 95.6 0.028 9.7E-07 55.5 8.1 42 1-43 1-44 (334)
435 2cvz_A Dehydrogenase, 3-hydrox 95.5 0.024 8.3E-07 54.3 7.5 90 326-450 3-93 (289)
436 3p2y_A Alanine dehydrogenase/p 95.5 0.13 4.3E-06 51.7 12.8 129 322-465 182-328 (381)
437 2uyy_A N-PAC protein; long-cha 95.5 0.021 7E-07 55.8 7.1 94 324-450 30-127 (316)
438 2y0c_A BCEC, UDP-glucose dehyd 95.5 0.04 1.4E-06 57.3 9.5 110 323-450 7-131 (478)
439 3i6i_A Putative leucoanthocyan 95.5 0.0086 2.9E-07 59.1 4.3 72 2-87 11-92 (346)
440 1p3d_A UDP-N-acetylmuramate--a 95.5 0.09 3.1E-06 54.5 12.2 121 1-145 18-144 (475)
441 3keo_A Redox-sensing transcrip 95.5 0.0039 1.3E-07 57.6 1.6 69 2-88 85-158 (212)
442 3tri_A Pyrroline-5-carboxylate 95.5 0.064 2.2E-06 51.5 10.3 102 324-457 3-108 (280)
443 2fp4_A Succinyl-COA ligase [GD 95.5 0.043 1.5E-06 53.6 9.0 103 3-144 15-121 (305)
444 2f1k_A Prephenate dehydrogenas 95.5 0.034 1.2E-06 53.1 8.2 92 326-449 2-93 (279)
445 3gt0_A Pyrroline-5-carboxylate 95.5 0.026 8.8E-07 53.1 7.1 100 325-457 3-107 (247)
446 3oh8_A Nucleoside-diphosphate 95.5 0.013 4.6E-07 61.4 5.7 36 1-38 147-183 (516)
447 3b1f_A Putative prephenate deh 95.4 0.021 7.2E-07 54.9 6.7 97 324-451 6-105 (290)
448 1c1d_A L-phenylalanine dehydro 95.4 0.03 1E-06 55.8 7.8 35 2-38 176-210 (355)
449 3kkj_A Amine oxidase, flavin-c 95.4 0.011 3.7E-07 54.3 4.3 32 3-36 4-35 (336)
450 1orr_A CDP-tyvelose-2-epimeras 95.4 0.038 1.3E-06 54.1 8.4 33 1-35 1-34 (347)
451 2ahr_A Putative pyrroline carb 95.4 0.057 1.9E-06 50.9 9.2 96 325-457 4-100 (259)
452 2r6j_A Eugenol synthase 1; phe 95.3 0.016 5.6E-07 56.2 5.5 71 3-87 13-88 (318)
453 3dfz_A SIRC, precorrin-2 dehyd 95.3 0.067 2.3E-06 49.7 9.3 33 2-36 32-64 (223)
454 1gad_O D-glyceraldehyde-3-phos 95.3 0.047 1.6E-06 53.9 8.8 42 1-43 1-44 (330)
455 1a4i_A Methylenetetrahydrofola 95.3 0.1 3.5E-06 50.4 10.9 91 307-449 149-239 (301)
456 1pgj_A 6PGDH, 6-PGDH, 6-phosph 95.3 0.058 2E-06 56.1 9.8 115 326-466 3-128 (478)
457 2wm3_A NMRA-like family domain 95.3 0.02 6.9E-07 55.1 5.8 72 2-87 6-81 (299)
458 1vl6_A Malate oxidoreductase; 95.2 0.069 2.4E-06 53.5 9.7 97 2-128 193-295 (388)
459 2zcu_A Uncharacterized oxidore 95.2 0.014 5E-07 55.4 4.7 73 3-87 1-74 (286)
460 3g79_A NDP-N-acetyl-D-galactos 95.2 0.16 5.6E-06 52.6 12.9 111 323-451 17-151 (478)
461 1i36_A Conserved hypothetical 95.2 0.054 1.8E-06 51.2 8.7 90 326-450 2-91 (264)
462 3c24_A Putative oxidoreductase 95.2 0.024 8.2E-07 54.5 6.2 93 325-451 12-105 (286)
463 2ywl_A Thioredoxin reductase r 95.2 0.018 6.2E-07 50.9 4.9 34 1-36 1-34 (180)
464 3st7_A Capsular polysaccharide 95.2 0.082 2.8E-06 52.5 10.2 32 2-35 1-34 (369)
465 1b0a_A Protein (fold bifunctio 95.2 0.11 3.7E-06 50.0 10.4 89 307-447 143-231 (288)
466 2x5o_A UDP-N-acetylmuramoylala 95.1 0.068 2.3E-06 54.8 9.7 114 2-145 6-130 (439)
467 3t4e_A Quinate/shikimate dehyd 95.1 0.088 3E-06 51.5 10.0 74 2-89 149-231 (312)
468 1yb4_A Tartronic semialdehyde 95.1 0.02 7E-07 55.0 5.3 93 325-450 4-99 (295)
469 2g1u_A Hypothetical protein TM 95.1 0.085 2.9E-06 45.6 8.9 108 321-461 16-133 (155)
470 2vns_A Metalloreductase steap3 95.1 0.043 1.5E-06 50.5 7.3 94 324-453 28-121 (215)
471 2yjz_A Metalloreductase steap4 94.0 0.004 1.4E-07 57.1 0.0 93 322-451 17-109 (201)
472 3p2o_A Bifunctional protein fo 95.0 0.13 4.5E-06 49.3 10.6 82 315-447 151-232 (285)
473 3ruf_A WBGU; rossmann fold, UD 95.0 0.019 6.6E-07 56.5 5.0 34 1-36 25-59 (351)
474 3pwk_A Aspartate-semialdehyde 95.0 0.015 5.3E-07 58.2 4.2 30 2-33 3-36 (366)
475 1hdg_O Holo-D-glyceraldehyde-3 95.0 0.075 2.6E-06 52.4 9.1 42 2-43 1-45 (332)
476 2x5j_O E4PDH, D-erythrose-4-ph 95.0 0.12 4.1E-06 51.1 10.6 41 2-43 3-48 (339)
477 1f0y_A HCDH, L-3-hydroxyacyl-C 95.0 0.1 3.5E-06 50.5 10.1 120 325-456 16-145 (302)
478 3slg_A PBGP3 protein; structur 95.0 0.0075 2.6E-07 60.1 1.8 41 1-42 24-65 (372)
479 2c5a_A GDP-mannose-3', 5'-epim 95.0 0.012 4.1E-07 58.9 3.3 35 1-37 29-64 (379)
480 3hsk_A Aspartate-semialdehyde 94.9 0.018 6.3E-07 57.9 4.5 30 2-32 20-50 (381)
481 3hm2_A Precorrin-6Y C5,15-meth 94.9 0.26 9E-06 42.8 11.7 113 2-144 27-143 (178)
482 3ktd_A Prephenate dehydrogenas 94.8 0.039 1.3E-06 54.8 6.5 93 324-450 8-104 (341)
483 3qj4_A Renalase; FAD/NAD(P)-bi 94.8 0.02 6.7E-07 56.3 4.4 34 1-36 1-37 (342)
484 4dgk_A Phytoene dehydrogenase; 94.8 0.017 5.8E-07 59.9 4.1 35 1-37 1-35 (501)
485 3ce6_A Adenosylhomocysteinase; 94.7 0.26 8.8E-06 51.3 12.6 92 321-448 271-362 (494)
486 4dio_A NAD(P) transhydrogenase 94.7 0.11 3.9E-06 52.4 9.7 129 322-466 188-339 (405)
487 3l07_A Bifunctional protein fo 94.7 0.21 7.1E-06 48.0 11.0 89 307-447 145-233 (285)
488 2hk9_A Shikimate dehydrogenase 94.6 0.066 2.3E-06 51.3 7.5 109 321-462 126-238 (275)
489 1iuk_A Hypothetical protein TT 94.6 0.097 3.3E-06 44.8 7.8 108 323-464 12-122 (140)
490 2bka_A CC3, TAT-interacting pr 94.6 0.017 5.8E-07 53.6 3.2 35 2-38 19-56 (242)
491 2d5c_A AROE, shikimate 5-dehyd 94.5 0.095 3.2E-06 49.7 8.3 107 321-463 114-226 (263)
492 3c8m_A Homoserine dehydrogenas 94.5 0.025 8.5E-07 55.9 4.3 78 2-89 7-97 (331)
493 3oj0_A Glutr, glutamyl-tRNA re 94.5 0.046 1.6E-06 46.7 5.5 90 324-448 21-111 (144)
494 1zud_1 Adenylyltransferase THI 94.5 0.075 2.6E-06 50.2 7.4 33 2-36 29-62 (251)
495 2pv7_A T-protein [includes: ch 94.5 0.07 2.4E-06 51.7 7.4 81 324-450 21-102 (298)
496 1t4b_A Aspartate-semialdehyde 94.5 0.025 8.6E-07 56.7 4.3 69 1-87 1-74 (367)
497 4a5o_A Bifunctional protein fo 94.5 0.22 7.7E-06 47.7 10.7 88 308-447 146-233 (286)
498 3fpf_A Mtnas, putative unchara 94.5 0.38 1.3E-05 46.5 12.4 97 2-127 124-222 (298)
499 4a26_A Putative C-1-tetrahydro 94.4 0.19 6.6E-06 48.5 10.2 89 308-448 150-240 (300)
500 3b1j_A Glyceraldehyde 3-phosph 94.4 0.05 1.7E-06 53.8 6.1 42 2-43 3-47 (339)
No 1
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=100.00 E-value=5.6e-95 Score=747.73 Aligned_cols=419 Identities=35% Similarity=0.546 Sum_probs=384.9
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhh-hcCCCEEEecCHHHhhccC
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFSTDVEKHVSEA 79 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~a 79 (480)
|.+|+|||+||||+++|..|+++ ||+|+|+|+|+++++.|++|+.|++||++++++.+ +..+++++|+|+++++++|
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~--G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~a 98 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALL--GHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAAT 98 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTS
T ss_pred CCEEEEEccCHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcC
Confidence 57899999999999999999998 99999999999999999999999999999999876 5678999999999999999
Q ss_pred cEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCC---CCcEEEEecCCCcchHHHH-HHHHHhcCCCCceEEeeC
Q 011641 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSK---SDKIVVEKSTVPVKTAEAI-EKILTHNSKGIKFQILSN 155 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~---~~~iVi~~STv~~gt~~~l-~~~l~~~~~g~~~~v~~~ 155 (480)
|++|||||||.+.++ .+|+++++++++.|+++++ ++++||++||+||||++++ .+++++.+++.+|+++|+
T Consensus 99 d~~~I~VpTP~~~d~-----~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~~~~~~~f~v~~~ 173 (444)
T 3vtf_A 99 DATFIAVGTPPAPDG-----SADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAEEAGGVKFSVASN 173 (444)
T ss_dssp SEEEECCCCCBCTTS-----SBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHTTTTTCCCEEEEC
T ss_pred CceEEEecCCCCCCC-----CCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHHhCCCCCceeecC
Confidence 999999999998755 8999999999999999885 5789999999999999985 566776655789999999
Q ss_pred CccccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHHHHHHHHHHHHHH
Q 011641 156 PEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSA 235 (480)
Q Consensus 156 Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~ 235 (480)
|||+.||++++++.+|+|||+|+. ++++.+.++++|+.+. .++.++++++||++|+++|+|++++|+|+||++.
T Consensus 174 PErl~eG~a~~d~~~~~riViG~~----~~~a~~~~~~ly~~~~--~~~~~~~~~~AE~~Kl~eN~~ravnIa~~NEla~ 247 (444)
T 3vtf_A 174 PEFLREGSALEDFFKPDRIVIGAG----DERAASFLLDVYKAVD--APKLVMKPREAELVKYASNVFLALKISFANEVGL 247 (444)
T ss_dssp CCCCCTTSHHHHHHSCSCEEEEES----SHHHHHHHHHHTTTSC--SCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCccccccccCCcEEEcCC----CHHHHHHHHHHHhccC--CCEEEechhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999987 4778899999999874 3567789999999999999999999999999999
Q ss_pred HHHHhCCCHHHHHHHhcCCCCCCCCCccCCCCccccchhHhHHHHHHHHHHCCCChhhHHHHHHHHHhHHhHHHHHHHHH
Q 011641 236 LCEATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVV 315 (480)
Q Consensus 236 l~~~~Gid~~~v~~~~~~~~~~~~~~~~pg~g~gG~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~ 315 (480)
+|+++|+|+++|++++++++|+|++|++||+||||||||||+++|++.|++.|++ .+++++++++|+.||+++++++.
T Consensus 248 ice~~GiDv~eV~~a~~~d~rig~~~l~PG~G~GG~CipkD~~~L~~~a~~~g~~--~~li~a~~~iN~~~~~~vv~~l~ 325 (444)
T 3vtf_A 248 LAKRLGVDTYRVFEAVGLDKRIGRHYFGAGLGFGGSCFPKDTLAFIRFGESLGLE--MAISKAVLRVNEYMPRYAVQLLE 325 (444)
T ss_dssp HHHHTTCCHHHHHHHHHTSTTSCSTTCCCSSCCCTTTHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHhccCCCCCCCCCCCCCCCCCcccCcCHHHHHHHHHhcCCC--HHHHHhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998 68999999999999999999998
Q ss_pred HHhcCcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcc
Q 011641 316 ASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPT 395 (480)
Q Consensus 316 ~~l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (480)
+.+ +.++++||+|||+||||||+|+|+||++.|++.|.++|++|.+|||++.++.. ..++
T Consensus 326 ~~~-~~l~g~~V~vlGlafK~~tdD~ReSpa~~ii~~L~~~Ga~V~~~DP~~~~~~~-~~~~------------------ 385 (444)
T 3vtf_A 326 ERL-GGLRGRHVGVLGLAFKPNTDDVRESRGVEVARLLLERGARVYVHDPMAMEKAR-AVLG------------------ 385 (444)
T ss_dssp HHH-TCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECSSTHHHHH-HHHG------------------
T ss_pred HHc-cccCCCEEEEEeeecCCCCCccccCcHHHHHHHHHHCCCEEEEECCCCChHHH-HhcC------------------
Confidence 876 57899999999999999999999999999999999999999999999965443 2232
Q ss_pred cccceEEecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCCCChhhhhhcCcEEEEecCC
Q 011641 396 MVKQVSVVWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNVVDANKLREIGFIVYSIGKP 468 (480)
Q Consensus 396 ~~~~~~~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~~~~~~~~~~g~~y~~iG~~ 468 (480)
..+++++++++++++||+|||+|+|++|+++|+ +.+ +|||+||++++++ ...|.||||.
T Consensus 386 --~~~~~~~~~~~a~~~aDavvi~t~h~ef~~ld~-------~~~-vv~D~Rni~~~~~----~~~y~gigWs 444 (444)
T 3vtf_A 386 --DSVTYVEDPQALLDQVEGVIIATAWPQYEGLDY-------RGK-VVVDGRYVKKARE----AKIYEGVAWA 444 (444)
T ss_dssp --GGSEECSCHHHHHHHCSEEEECSCCGGGGGSCC-------TTC-EEEESSCCGGGGG----SSEEEESSCC
T ss_pred --CCceecCCHHHHHhCCCEEEEccCCHHHhCCCc-------CCC-EEEECCCCCChhh----hcceeeeecC
Confidence 357889999999999999999999999999986 345 9999999999754 4579999974
No 2
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=100.00 E-value=1.6e-92 Score=736.01 Aligned_cols=433 Identities=37% Similarity=0.626 Sum_probs=396.6
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhh-hcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~aD 80 (480)
.+|+|||+||||++||.+|+++ ||+|++||+++++++.|+++..+++||++++++.+ +..+++++|+|+++++++||
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~--G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aD 86 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDF--GHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDAD 86 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCS
T ss_pred eEEEEEcCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCC
Confidence 4799999999999999999998 99999999999999999999999999999998865 35678999999998999999
Q ss_pred EEEEeccCCCCC-CCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCccc
Q 011641 81 IVFVSVNTPTKT-QGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFL 159 (480)
Q Consensus 81 vVii~Vptp~~~-~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (480)
+||+|||||.+. ++ .+|++++++++++|.+.++++++||++||++|||++++.+.+++...+.+|.++++|||+
T Consensus 87 vvii~Vptp~~~~~~-----~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~~~~~d~~v~~~Pe~a 161 (446)
T 4a7p_A 87 AVFIAVGTPSRRGDG-----HADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDEVERIIAEVAPNSGAKVVSNPEFL 161 (446)
T ss_dssp EEEECCCCCBCTTTC-----CBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHHSTTSCCEEEECCCCC
T ss_pred EEEEEcCCCCccccC-----CccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCCCCceEEeCcccc
Confidence 999999999854 33 899999999999999999999999999999999999998888775444679999999999
Q ss_pred cccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCC--eEEeCCchhHHHhhhhHhHHHHHHHHHHHHHHHHH
Q 011641 160 AEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPED--RILTTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 160 ~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~--~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
.||.+++++.+|++||+|+. ++++.++++++|+.+.+.. ++..+++++||++|+++|++++++|+++||++.+|
T Consensus 162 ~eG~a~~d~~~p~~ivvG~~----~~~~~~~~~~ly~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~l~ 237 (446)
T 4a7p_A 162 REGAAIEDFKRPDRVVVGTE----DEFARQVMREIYRPLSLNQSAPVLFTGRRTSELIKYAANAFLAVKITFINEIADLC 237 (446)
T ss_dssp CTTSHHHHHHSCSCEEEECS----CHHHHHHHHHHHCSCC-----CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCCCEEEEeCC----cHHHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999986 4789999999999986422 57888999999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCCCCCccCCCCccccchhHhHHHHHHHHHHCCCChhhHHHHHHHHHhHHhHHHHHHHHHHH
Q 011641 238 EATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVAS 317 (480)
Q Consensus 238 ~~~Gid~~~v~~~~~~~~~~~~~~~~pg~g~gG~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 317 (480)
+++|+|+++|+++++++||+|+++++||+||||+|+|||++++++.|++.|++ .+++++++++|++||+++++++.+.
T Consensus 238 ~~~GiD~~~v~~~~~~~~rig~~~l~pg~G~gg~c~~KD~~~l~~~A~~~g~~--~~l~~~~~~iN~~~~~~~~~~i~~~ 315 (446)
T 4a7p_A 238 EQVGADVQEVSRGIGMDNRIGGKFLHAGPGYGGSCFPKDTLALMKTAADNETP--LRIVEATVQVNDARKRAMGRKVIKA 315 (446)
T ss_dssp HHTTCCHHHHHHHHHTSTTC---CCCCCSCCCTTTHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHhcCCCCCCccCCCCCCcchhhHHHHHHHHHHHHHhcCCC--CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999 7999999999999999999999999
Q ss_pred hcCcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccc
Q 011641 318 MFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMV 397 (480)
Q Consensus 318 l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (480)
+++.++++||+|||+||||||+|+||||++.|++.|.++|++|.+|||++.++. ... +
T Consensus 316 l~~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~v~~~DP~~~~~~-~~~---------------------~ 373 (446)
T 4a7p_A 316 MGGDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGATVKAYDPEGVEQA-SKM---------------------L 373 (446)
T ss_dssp TTSCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCEEEEECSSCHHHH-GGG---------------------C
T ss_pred hcccCCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCCHhH-HHh---------------------c
Confidence 987899999999999999999999999999999999999999999999996432 221 1
Q ss_pred cceEEecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCCCChhhhhhcCcEEEEecCCCC
Q 011641 398 KQVSVVWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNVVDANKLREIGFIVYSIGKPLD 470 (480)
Q Consensus 398 ~~~~~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~~~~~~~~~~g~~y~~iG~~~~ 470 (480)
+++++++++++++++||+|||+|+|++|+++||+.+.+.|+.| +|||+||+++++.+++.||.|+||||+.+
T Consensus 374 ~~~~~~~~~~~~~~~ad~vvi~t~~~~f~~~d~~~~~~~~~~~-~i~D~r~~~~~~~~~~~g~~y~~iG~~~~ 445 (446)
T 4a7p_A 374 TDVEFVENPYAAADGADALVIVTEWDAFRALDLTRIKNSLKSP-VLVDLRNIYPPAELERAGLQYTGVGKPSR 445 (446)
T ss_dssp SSCCBCSCHHHHHTTBSEEEECSCCTTTTSCCHHHHHTTBSSC-BEECSSCCSCHHHHHHTTCBCCCSSCC--
T ss_pred CCceEecChhHHhcCCCEEEEeeCCHHhhcCCHHHHHHhcCCC-EEEECCCCCCHHHHHhcCCEEEEecCCCC
Confidence 3567888999999999999999999999999999999999988 89999999999999999999999999743
No 3
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=100.00 E-value=2e-88 Score=708.81 Aligned_cols=432 Identities=37% Similarity=0.619 Sum_probs=392.1
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhh-hcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~aD 80 (480)
|||+|||+|+||+++|..|+++ ||+|++||+++++++.++++..+++++++++++.+ ...+++++++|+++++++||
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~--G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aD 80 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL--GANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEAD 80 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCS
T ss_pred CEEEEECcCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCC
Confidence 7999999999999999999998 99999999999999999999999999999987754 33578999999999999999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCC----CCceEEeeCC
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSK----GIKFQILSNP 156 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~----g~~~~v~~~P 156 (480)
+||+|||||.+.++ .+|++++++++++|.++++++++||++||++|||++++.+.+++... +.+|.++++|
T Consensus 81 vViiaVptp~~~~~-----~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~~~~~~~~~~d~~v~~~P 155 (450)
T 3gg2_A 81 IIFIAVGTPAGEDG-----SADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQEELDKREVLIDFDIASNP 155 (450)
T ss_dssp EEEECCCCCBCTTS-----SBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECC
T ss_pred EEEEEcCCCcccCC-----CcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHHhccccCcCcceeEEech
Confidence 99999999987644 89999999999999999999999999999999999999888766431 3679999999
Q ss_pred ccccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCC-CeEEeCCchhHHHhhhhHhHHHHHHHHHHHHHHH
Q 011641 157 EFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPE-DRILTTNLWSAELSKLAANAFLAQRISSVNAMSA 235 (480)
Q Consensus 157 e~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~-~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~ 235 (480)
|++.+|.+.+++.+|+++++|+. ++++.++++++|+.+.+. .+++.+++++||++|+++|++++++++++||++.
T Consensus 156 e~a~eG~~~~~~~~p~~ivvG~~----~~~~~~~~~~l~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~ 231 (450)
T 3gg2_A 156 EFLKEGNAIDDFMKPDRVVVGVD----SDRARELITSLYKPMLLNNFRVLFMDIASAEMTKYAANAMLATRISFMNDVAN 231 (450)
T ss_dssp CCCCTTSHHHHHHSCSCEEEEES----SHHHHHHHHHHHTTTCCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccchhhhccCCCEEEEEcC----CHHHHHHHHHHHHHHhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999986 478999999999988632 3577899999999999999999999999999999
Q ss_pred HHHHhCCCHHHHHHHhcCCCCCCCCCccCCCCccccchhHhHHHHHHHHHHCCCChhhHHHHHHHHHhHHhHHHHHHHHH
Q 011641 236 LCEATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVV 315 (480)
Q Consensus 236 l~~~~Gid~~~v~~~~~~~~~~~~~~~~pg~g~gG~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~ 315 (480)
+|+++|+|+++|+++++++||+|+++++||+||||+|+|||++++++.|++.|++ .+++++++++|+.||+++++++.
T Consensus 232 l~~~~Gid~~~v~~~~~~~~rig~~~~~pg~G~gg~c~~KD~~~l~~~a~~~g~~--~~l~~~~~~iN~~~~~~~~~~~~ 309 (450)
T 3gg2_A 232 LCERVGADVSMVRLGIGSDSRIGSKFLYPGCGYGGSCFPKDVKALIRTAEDNGYR--MEVLEAVERVNEKQKSILFDKFS 309 (450)
T ss_dssp HHHHHTCCHHHHHHHHHTSTTTCSSSCCCSSCCCSSHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHHHTTHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHcCCCCCCcccCCCCCCCCcccHHhhHHHHHHHHHHcCCC--cHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 79999999999999999999999
Q ss_pred HHhcCcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcc
Q 011641 316 ASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPT 395 (480)
Q Consensus 316 ~~l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (480)
+.+++.++++||+||||||||||+|+|+||++.|++.|.++|++|.+|||++.++. ...++
T Consensus 310 ~~~~~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~-~~~~~------------------ 370 (450)
T 3gg2_A 310 TYYKGNVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKLLEVGCRVRVYDPVAMKEA-QKRLG------------------ 370 (450)
T ss_dssp HHTTTCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSCHHHH-HHHHG------------------
T ss_pred HHhcccCCCCEEEEEeeeeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCcHHH-HHhcC------------------
Confidence 99987899999999999999999999999999999999999999999999997532 22221
Q ss_pred cccceEEecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCCCChhhhhhcCcEEEEecCCCC
Q 011641 396 MVKQVSVVWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNVVDANKLREIGFIVYSIGKPLD 470 (480)
Q Consensus 396 ~~~~~~~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~~~~~~~~~~g~~y~~iG~~~~ 470 (480)
..+++++++++++++||+|||+|+|++|+++||+.+.+.|+.| +|||+||+++++ ++.||.|+||||+..
T Consensus 371 --~~~~~~~~~~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~~-~i~D~r~~~~~~--~~~g~~y~~ig~~~~ 440 (450)
T 3gg2_A 371 --DKVEYTTDMYDAVRGAEALFHVTEWKEFRMPDWSALSQAMAAS-LVIDGRNVYELP--ADSDFTLLNIGNSAI 440 (450)
T ss_dssp --GGSEECSSHHHHTTTCSCEEECSCCGGGSSCCHHHHHHHSSSC-EEEESSCCCCCC------CEEEECC----
T ss_pred --ccceecCCHHHHhcCCCEEEEccCCHHHhhcCHHHHHHhcCCC-EEEECCCCCChH--HhCCCEEEEeccccc
Confidence 2477889999999999999999999999999999999999988 899999999988 789999999999754
No 4
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=100.00 E-value=1.9e-88 Score=709.05 Aligned_cols=430 Identities=26% Similarity=0.397 Sum_probs=389.3
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCC-eEEEEECCHH----HHHHHHcCCCCC--cCCChHHHHhh-hcCCCEEEecCH
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVS----RINAWNSDQLPI--YEPGLDGVVKQ-CRGKNLFFSTDV 72 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~----~v~~l~~~~~~~--~e~~l~~~~~~-~~~~~l~~t~d~ 72 (480)
||||+|||+|+||+++|.+|+++ +|| +|++||++++ +++.++++..++ +|+++++++.+ ...+++++|++
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~-~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd- 95 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADA-PCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPD- 95 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHS-TTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESC-
T ss_pred CCEEEEECcCHHHHHHHHHHHHh-CCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCc-
Confidence 58999999999999999999986 479 9999999999 999999999999 89999988764 33578999999
Q ss_pred HHhhccCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHH-HHHh-cCC--CC
Q 011641 73 EKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEK-ILTH-NSK--GI 148 (480)
Q Consensus 73 ~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~-~l~~-~~~--g~ 148 (480)
.+++++||+||+|||||.+.++ ...+|++++++++++|.++++++++||++||++|||++++.+ ++++ .+. +.
T Consensus 96 ~ea~~~aDvViiaVptp~~~~~---~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~~ile~~~g~~~~~ 172 (478)
T 3g79_A 96 FSRISELDAVTLAIQTPFANPK---DLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQILEEESGLKAGE 172 (478)
T ss_dssp GGGGGGCSEEEECCCCCCCSSC---CSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHHHHHHHHHCCCBTT
T ss_pred HHHHhcCCEEEEecCCchhccC---CccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHHHHHHHhcCCCcCC
Confidence 5679999999999999986643 112899999999999999999999999999999999999875 5633 332 46
Q ss_pred ceEEeeCCccccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhcc-CCCCeEEeCCchhHHHhhhhHhHHHHHHH
Q 011641 149 KFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHW-VPEDRILTTNLWSAELSKLAANAFLAQRI 227 (480)
Q Consensus 149 ~~~v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~-~~~~~v~~~~~~~ae~~Kl~~N~~~~~~i 227 (480)
+|.++++|||+.||.+..++.++++||+|++ +++.++++++|+.+ .. .+++.+++++||++|+++|+|++++|
T Consensus 173 d~~v~~~Pe~~~~G~a~~~~~~~~~Iv~G~~-----~~~~~~~~~ly~~~~~~-~~~~~~~~~~aE~~Kl~~N~~~a~~I 246 (478)
T 3g79_A 173 DFALAHAPERVMVGRLLKNIREHDRIVGGID-----EASTKRAVELYSPVLTV-GQVIPMSATAAEVTKTAENTFRDLQI 246 (478)
T ss_dssp TBEEEECCCCCCTTSHHHHHHHSCEEEEESS-----HHHHHHHHHHHGGGCSS-CCEEEEEHHHHHHHHHHHHHHHHHHH
T ss_pred ceeEEeCCccCCccchhhhhcCCcEEEEeCC-----HHHHHHHHHHHhhhccC-CeEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 7999999999999999999999999887764 77889999999998 53 57888999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHhcCCC--CCCCCCccCCCCccccchhHhHHHHHHHHHHCCCC-----hhhHHHHHHH
Q 011641 228 SSVNAMSALCEATGANVSQVAFAVGTDS--RIGPKFLNASVGFGGSCFQKDILNLVYICECNGLP-----EVAEYWKQVI 300 (480)
Q Consensus 228 a~~nE~~~l~~~~Gid~~~v~~~~~~~~--~~~~~~~~pg~g~gG~cl~kD~~~l~~~a~~~g~~-----~~~~~~~~~~ 300 (480)
+++||++.+|+++|+|+++|+++++++| |++.++++||+||||+|||||++++++.|++.|++ -..+++++++
T Consensus 247 a~~nE~~~l~e~~GiD~~~v~~~~~~~~~~ri~~~~~~PG~G~GG~c~~KD~~~l~~~a~~~g~~~~~~~~~~~li~~~~ 326 (478)
T 3g79_A 247 AAINQLALYCEAMGINVYDVRTGVDSLKGEGITRAVLWPGAGVGGHCLTKDTYHLERGVKIGRGELDYPEGADSIYVLAR 326 (478)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHTSCCSSSCCCCCCCCSCCCSSHHHHHHHHHHHHHTTSSCCCCCCSSCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHCCCchhhhccccCCCCCCcchhhHHHHHHHHHHHHHHcCCCcccccchhHHHHHHH
Confidence 9999999999999999999999999999 88899999999999999999999999999999965 1257999999
Q ss_pred HHhHHhHHHHHHHHHHHhcC---cCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhh
Q 011641 301 KINDYQKSRFVNRVVASMFN---TVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLT 377 (480)
Q Consensus 301 ~~N~~~~~~~~~~~~~~l~~---~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~ 377 (480)
++|+.||+++++++.+.+.+ .++++||+|||+||||||+|+|+||++.|++.|+++|++|.+|||++.. +
T Consensus 327 ~iN~~~~~~~~~~i~~~l~~~~~~~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~g~~V~~~DP~~~~------~- 399 (478)
T 3g79_A 327 KVNDFMPAHMYNLTVAALERLGKKMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLCLKAGASVMVHDPYVVN------Y- 399 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCSTTCEEEEECSSSSTTCSCCTTCTHHHHHHHHHHHTCEEEEECSSCCC------B-
T ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCEEEEEeeecCCCCcchhcCcHHHHHHHHHHCCCEEEEECCCccc------c-
Confidence 99999999999999998843 6889999999999999999999999999999999999999999999972 1
Q ss_pred ccccCCCCCCCCCCCCcccccceEEecCHHhhcccccEEEEEecCcccccccHHHHHHhcC--CCCEEEEcCCCCChhhh
Q 011641 378 MNKFDWDHPLHLQPMSPTMVKQVSVVWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQ--KPAFVFDGRNVVDANKL 455 (480)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~--~~~~viD~~~~~~~~~~ 455 (480)
+.+.++.++++++++||+|||+|+|++|+++||+.+.+.|+ .| +|||+||+++++++
T Consensus 400 --------------------~~~~~~~~~~~~~~~ad~vvi~t~~~~f~~~d~~~~~~~~~~~~~-~i~D~rn~~~~~~~ 458 (478)
T 3g79_A 400 --------------------PGVEISDNLEEVVRNADAIVVLAGHSAYSSLKADWAKKVSAKANP-VIIDGRNVIEPDEF 458 (478)
T ss_dssp --------------------TTBCEESCHHHHHTTCSEEEECSCCHHHHSCCHHHHHHHHCCSSC-EEEESSSCSCHHHH
T ss_pred --------------------cCcceecCHHHHHhcCCEEEEecCCHHHHhhhHHHHHHHhccCCC-EEEECCCCCCHHHH
Confidence 12457789999999999999999999999999999999998 56 99999999999999
Q ss_pred hhcCcEEEEecCCC
Q 011641 456 REIGFIVYSIGKPL 469 (480)
Q Consensus 456 ~~~g~~y~~iG~~~ 469 (480)
++.||.|+||||..
T Consensus 459 ~~~g~~y~~ig~~~ 472 (478)
T 3g79_A 459 IGKGFVYKGIGREG 472 (478)
T ss_dssp HTTTCEEEETTCTT
T ss_pred HhcCCEEEEecccC
Confidence 99999999999964
No 5
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=100.00 E-value=7e-88 Score=696.40 Aligned_cols=410 Identities=27% Similarity=0.427 Sum_probs=364.1
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhh-hcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~aD 80 (480)
.|..|||+||||++||.+|+++ ||+|++||+++++++.|++++.|++||++++++++ +..+++++|+|+ ++||
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~--G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~----~~aD 85 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKH--GVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTP----EASD 85 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSC----CCCS
T ss_pred CccEEEeeCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCch----hhCC
Confidence 4789999999999999999998 99999999999999999999999999999999875 446889999983 5899
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHH-HHhcCC--CCceEEeeCCc
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKI-LTHNSK--GIKFQILSNPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~-l~~~~~--g~~~~v~~~Pe 157 (480)
+||+|||||.+.+. +..+|+++++++.++|.++++++++||++||++|||++++.+. +++.+. +.+|.++++||
T Consensus 86 vvii~VpTp~~~~~---~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~e~~g~~~~~d~~v~~~Pe 162 (431)
T 3ojo_A 86 VFIIAVPTPNNDDQ---YRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDIYLVHCPE 162 (431)
T ss_dssp EEEECCCCCBCSSS---SCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHHHTTTCCBTTTEEEEECCC
T ss_pred EEEEEeCCCccccc---cCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHHHHcCCCcCCCeEEEECCC
Confidence 99999999986531 1389999999999999999999999999999999999998665 443332 56799999999
Q ss_pred cccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHHHHHHHHHHHHHHHH
Q 011641 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
|+.||.+.+++.+|++||+|++ +++.++++++|+.+++ ..++.+++++||++|+++|+|++++|+|+||++.+|
T Consensus 163 ~~~~G~A~~~~~~p~~Iv~G~~-----~~~~~~~~~ly~~~~~-~~~~~~~~~~AE~~Kl~~N~~~a~~Ia~~nE~~~l~ 236 (431)
T 3ojo_A 163 RVLPGKILEELVHNNRIIGGVT-----KACIEAGKRVYRTFVQ-GEMIETDARTAEMSKLMENTYRDVNIALANELTKIC 236 (431)
T ss_dssp CCCTTSHHHHHHHSCEEEEESS-----HHHHHHHHHHHTTTCC-SCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcchhhcccCCCEEEEeCC-----HHHHHHHHHHHHHHhC-CcEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987764 7899999999999874 467778999999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCCCCCccCCCCccccchhHhHHHHHHHHHHCCCChhhHHHHHHHHHhHHhHHHHHHHHHHH
Q 011641 238 EATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVAS 317 (480)
Q Consensus 238 ~~~Gid~~~v~~~~~~~~~~~~~~~~pg~g~gG~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 317 (480)
+++|+|+++|+++++++||+ ++++||+||||||||||+++|++.|++.| +++++++++|+.||+++++++.+.
T Consensus 237 e~~GiD~~~v~~~~~~~~ri--~~l~pG~G~GG~C~pkD~~~L~~~a~~~~-----~li~~~~~iN~~~~~~v~~~~~~~ 309 (431)
T 3ojo_A 237 NNLNINVLDVIEMANKHPRV--NIHQPGPGVGGHCLAVDPYFIIAKDPENA-----KLIQTGREINNSMPAYVVDTTKQI 309 (431)
T ss_dssp HHTTCCHHHHHHHHTTSTTC--CCCCCCSCCCCCCBCSCC---------CC-----HHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHccCCCc--ccCCCCCCccccchhhhHHHHHHHHHHHh-----HHHHHHHHHHHHhHHHHHHHHHHH
Confidence 99999999999999999987 68899999999999999999999999876 799999999999999999999988
Q ss_pred hcCcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhC-CCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCccc
Q 011641 318 MFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGD-KARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTM 396 (480)
Q Consensus 318 l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~-g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (480)
+ +.++++||+|||+||||||||+||||++.|++.|.++ |++|.+|||++..+ +
T Consensus 310 l-~~~~~~~v~vlGlafK~~tdD~ReSpa~~i~~~L~~~~g~~V~~~DP~~~~~-----~-------------------- 363 (431)
T 3ojo_A 310 I-KALSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVELD-----F-------------------- 363 (431)
T ss_dssp H-HHSSCCEEEEECCCSSTTSCCCTTCHHHHHHHHHHHSTTCEEEEECSSCCCT-----T--------------------
T ss_pred h-hhcCCCEEEEEeeeeCCCCcchhcChHHHHHHHHHhhcCCEEEEECCCcccc-----c--------------------
Confidence 7 4678999999999999999999999999999999999 99999999999753 1
Q ss_pred ccceEEecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCCCChhhhhhcCcEEEEecCCC
Q 011641 397 VKQVSVVWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNVVDANKLREIGFIVYSIGKPL 469 (480)
Q Consensus 397 ~~~~~~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~~~~~~~~~~g~~y~~iG~~~ 469 (480)
++.++++++++||+|||+|+|++|+++||+.+ +.|+.| +|||+||++++ +..||.|+||||-.
T Consensus 364 -----~~~~~~~~~~~ad~vvi~t~~~~f~~~d~~~~-~~~~~~-~i~D~r~~~~~---~~~~~~y~~ig~~~ 426 (431)
T 3ojo_A 364 -----VEHDMSHAVKDASLVLILSDHSEFKNLSDSHF-DKMKHK-VIFDTKNVVKS---SFEDVLYYNYGNIF 426 (431)
T ss_dssp -----BCSTTHHHHTTCSEEEECSCCGGGTSCCGGGG-TTCSSC-EEEESSCCCCS---CCSSSEEEETTTGG
T ss_pred -----ccCCHHHHHhCCCEEEEecCCHHHhccCHHHH-HhCCCC-EEEECCCCCCc---hhcCeEEEeeCchh
Confidence 24578999999999999999999999999998 788876 99999999975 46899999999864
No 6
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=100.00 E-value=1.1e-85 Score=694.65 Aligned_cols=460 Identities=58% Similarity=0.999 Sum_probs=404.7
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||+|||+|+||+++|.+|+++++|++|++||+++++++.++++..+++++++++++.....+++++++++++++++||
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aD 88 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEAD 88 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCC
Confidence 47999999999999999999997556999999999999999999999999999988776433457899999988899999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHh-cC--CCCceEEeeCCc
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTH-NS--KGIKFQILSNPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~-~~--~g~~~~v~~~Pe 157 (480)
+||+|||||.+.++.+.+..+|++++++++++|.++++++++||++||++||+++.+.+.+++ .+ .+.+|+++++||
T Consensus 89 vvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~~~~~~~~~d~~v~~~Pe 168 (481)
T 2o3j_A 89 LIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILREAQKNNENLKFQVLSNPE 168 (481)
T ss_dssp EEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHTC----CCEEEEECCC
T ss_pred EEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHHhhCcCcCCceEEEeCcc
Confidence 999999999754322223468999999999999999999999999999999999999888877 43 146788999999
Q ss_pred cccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHHHHHHHHHHHHHHHH
Q 011641 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
+..+|.+.+++.+++++++|+.++.+++++.+.++++|+.++...++..++++++|++|+++|++++++++++||++.+|
T Consensus 169 ~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~~N~~~a~~ia~~nE~~~la 248 (481)
T 2o3j_A 169 FLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNTWSSELSKLVANAFLAQRISSINSISAVC 248 (481)
T ss_dssp CCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998889999999875433346889999999998632467888999999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCCCCCccCCCCccccchhHhHHHHHHHHHHCCCChhhHHHHHHHHHhHHhHHHHHHHHHHH
Q 011641 238 EATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVAS 317 (480)
Q Consensus 238 ~~~Gid~~~v~~~~~~~~~~~~~~~~pg~g~gG~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 317 (480)
+++|+|+++|+++++++||++.+++.||+||||+|+|||++++++.|++.|+++..+++++++++|++||+++++++.+.
T Consensus 249 ~~~Gid~~~v~~~~~~~~ri~~~~~~pg~g~gg~c~~KD~~~l~~~A~~~g~~~~~~l~~~~~~~N~~~~~~~~~~~~~~ 328 (481)
T 2o3j_A 249 EATGAEISEVAHAVGYDTRIGSKFLQASVGFGGSCFQKDVLSLVYLCESLNLPQVADYWQGVININNWQRRRFADKIIAE 328 (481)
T ss_dssp HHHSCCHHHHHHHHHTSTTTCSSSCCCCSCCCSSSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCcCHHHHHHHHccCCCCCCCCCCCCCccCCccHHHHHHHHHHHHHHcCCCccchHHHHHHHHHHhhHHHHHHHHHHh
Confidence 99999999999999999999989999999999999999999999999999998667899999999999999999999999
Q ss_pred hcCcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccc
Q 011641 318 MFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMV 397 (480)
Q Consensus 318 l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (480)
+++.++++||+|||+|||+||+|+|+||++.|++.|.++|++|.+|||+++.++...++.. .+..+ ...
T Consensus 329 l~~~~~~~~v~vlGlafK~~~dd~R~Spa~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~--~~~~~---------~~~ 397 (481)
T 2o3j_A 329 LFNTVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHLMEEHAKLSVYDPKVQKSQMLNDLAS--VTSAQ---------DVE 397 (481)
T ss_dssp TTTCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHHH--HSCHH---------HHH
T ss_pred hccccCCCeEEEEeeeeCCCCCccccChHHHHHHHHHHCCCEEEEECCCCCchhhHHHHHh--hhccc---------ccc
Confidence 8777899999999999999999999999999999999999999999999987644332210 00000 000
Q ss_pred cceEEecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCCCChhhhhhcCcEEEEecCCCCc
Q 011641 398 KQVSVVWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNVVDANKLREIGFIVYSIGKPLDP 471 (480)
Q Consensus 398 ~~~~~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~~~~~~~~~~g~~y~~iG~~~~~ 471 (480)
+.+++++++++++++||+|||+|+|++|+++||+++.+.|+.+.+|||+||+++++++++.||.|+||||+.++
T Consensus 398 ~~~~~~~~~~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~~~~i~D~r~~~~~~~~~~~g~~~~~iG~~~~~ 471 (481)
T 2o3j_A 398 RLITVESDPYAAARGAHAIVVLTEWDEFVELNYSQIHNDMQHPAAIFDGRLILDQKALREIGFRTFAIGTSPDQ 471 (481)
T ss_dssp HHEEEESSHHHHHTTCSEEEECSCCGGGTTSCHHHHHHHSCSSCEEEESSSCSCHHHHHHHTCEEEETTSCSCC
T ss_pred CceeecCCHHHHHcCCCEEEEcCCcHHhhccCHHHHHHhcCCCCEEEECCCCCCHHHHHhcCcEEEEecCcccc
Confidence 24678889999999999999999999999999999999999887899999999999999999999999997654
No 7
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=100.00 E-value=3.4e-83 Score=674.07 Aligned_cols=451 Identities=36% Similarity=0.589 Sum_probs=400.1
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhh-hcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~aD 80 (480)
|||+|||+|+||+++|..|+++ ||+|++||+++++++.+++++.+++++++++++.+ ...+++++++|+++++++||
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~--G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aD 86 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADI--GHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGD 86 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCS
T ss_pred ceEEEECcCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCC
Confidence 8999999999999999999998 99999999999999999999999999999877653 33467999999988899999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcC-CC---CceEEeeCC
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNS-KG---IKFQILSNP 156 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~-~g---~~~~v~~~P 156 (480)
+||+|||||.+.++ .+|++++++++++|.++++++++|+++||++||+++.+.+.+++.. .+ .+|.++++|
T Consensus 87 vviiaVptp~~~~~-----~~dl~~v~~v~~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~~~~~g~~~~~~~v~~~P 161 (478)
T 2y0c_A 87 VQFIAVGTPPDEDG-----SADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAEELAKRGGDQMFSVVSNP 161 (478)
T ss_dssp EEEECCCCCBCTTS-----SBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECC
T ss_pred EEEEEeCCCcccCC-----CccHHHHHHHHHHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHHHhcCCCCCccEEEEECh
Confidence 99999999987654 8999999999999999999999999999999999999888876641 12 578999999
Q ss_pred ccccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCC-CCeEEeCCchhHHHhhhhHhHHHHHHHHHHHHHHH
Q 011641 157 EFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVP-EDRILTTNLWSAELSKLAANAFLAQRISSVNAMSA 235 (480)
Q Consensus 157 e~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~-~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~ 235 (480)
|++.||.+.+++.+++++++|+.++....++.+.++++|+.+.+ ..++..+++++||+.|+++|++++++++++||++.
T Consensus 162 e~~~eG~~~~~~~~p~~iviG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~ 241 (478)
T 2y0c_A 162 EFLKEGAAVDDFTRPDRIVIGCDDDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFMNELAN 241 (478)
T ss_dssp CCCCTTCHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHTGGGGSSSCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccceeeccCCCCEEEEEECCCcccHHHHHHHHHHHHHHhccCCeEEcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999889999999875210001788999999998762 24678889999999999999999999999999999
Q ss_pred HHHHhCCCHHHHHHHhcCCCCCCCCCccCCCCccccchhHhHHHHHHHHHHCCCChhhHHHHHHHHHhHHhHHHHHHHHH
Q 011641 236 LCEATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVV 315 (480)
Q Consensus 236 l~~~~Gid~~~v~~~~~~~~~~~~~~~~pg~g~gG~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~ 315 (480)
+|+++|+|+++++++++.++|++..++.||+|+||+|++||+.++.+.|++.|++ .++++++.++|+.|++++++++.
T Consensus 242 la~~~Gid~~~v~~~i~~~~rig~~~~~pG~g~gg~c~~kD~~~l~~~A~~~gv~--~pl~~~v~~in~~~~~~~~~~~~ 319 (478)
T 2y0c_A 242 LADRFGADIEAVRRGIGSDPRIGYHFLYAGCGYGGSCFPKDVEALIRTADEHGQS--LQILKAVSSVNATQKRVLADKIV 319 (478)
T ss_dssp HHHHTTCCHHHHHHHHHTSTTTCSTTCCCSSCCCSSSHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHHHTTHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHhcCCccCcccCCCCcccccCcCHHHHHHHHHHHHHcCCC--cHHHHHHHHHHHHhHHHHHHHHH
Confidence 9999999999999999999999888899999999999999999999999999999 79999999999999999999999
Q ss_pred HHhcCcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcc
Q 011641 316 ASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPT 395 (480)
Q Consensus 316 ~~l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (480)
+.+++.++++||+||||||||||||+||||++.|++.|.++|++|.+|||++.++ ....++. ..|..| .
T Consensus 320 ~~~~~~~~~~~v~vlGlafK~~~dD~R~Sp~~~i~~~L~~~g~~v~~~DP~~~~~-~~~~~~~--~~~~~~--------~ 388 (478)
T 2y0c_A 320 ARFGEDLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSRGARIAAYDPVAQEE-ARRVIAL--DLADHP--------S 388 (478)
T ss_dssp HHHCSCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECTTTHHH-HHHHHHH--HTTTCH--------H
T ss_pred HHhcccCCCCEEEEEecccCCCCCccccChHHHHHHHHHHCCCEEEEECCCccHH-HHHhhcc--cccccc--------c
Confidence 9987788999999999999999999999999999999999999999999998653 2222210 001111 1
Q ss_pred cccceEEecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCCCChhhhhhcCcEEEEecCCCCccc
Q 011641 396 MVKQVSVVWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNVVDANKLREIGFIVYSIGKPLDPWL 473 (480)
Q Consensus 396 ~~~~~~~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~~~~~~~~~~g~~y~~iG~~~~~~~ 473 (480)
..+.+.+++++++++++||+|||+|+|++|+++||+.+.+.|+.+ +|||+||+++++.+++.||.|+||||+...|-
T Consensus 389 ~~~~~~~~~~~~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~~-~i~D~r~~~~~~~~~~~g~~y~~ig~~~~~~~ 465 (478)
T 2y0c_A 389 WLERLSFVDDEAQAARDADALVIVTEWKIFKSPDFVALGRLWKTP-VIFDGRNLYEPETMSEQGIEYHPIGRPGSRQA 465 (478)
T ss_dssp HHTTEEECSSHHHHTTTCSEEEECSCCGGGGSCCHHHHHTTCSSC-EEEESSCCSCHHHHHHTTCEEECSSSCCCHHH
T ss_pred cccceeecCCHHHHHhCCCEEEEecCChHhhccCHHHHHhhcCCC-EEEECCCCCCHHHHHhcCCEEEEECcccchhH
Confidence 112478889999999999999999999999999999999999887 99999999999999999999999999877663
No 8
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=100.00 E-value=2e-82 Score=668.52 Aligned_cols=459 Identities=64% Similarity=1.054 Sum_probs=402.6
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||+|||+|+||+++|..|+++++|++|++||+++++++.++++..+++++++++++.+....++++++++++++++||
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aD 84 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEAD 84 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCS
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCC
Confidence 58999999999999999999987456999999999999999999999999999988775433346899999988899999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCC-CCceEEeeCCccc
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSK-GIKFQILSNPEFL 159 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~-g~~~~v~~~Pe~~ 159 (480)
+||+|||+|.+.++...+..+|++++.+++++|.+.++++++||++||+++|+++.+.+.+++.+. +.++.+.++||+.
T Consensus 85 vViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~~~d~~V~~~Pe~~ 164 (467)
T 2q3e_A 85 LVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPEFL 164 (467)
T ss_dssp EEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCTTCEEEEEECCCCC
T ss_pred EEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCCCCCCeEEEeCHHHh
Confidence 999999999764321011368999999999999999999999999999999999999888877543 5688999999999
Q ss_pred cccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHHHHHHHHHHHHHHHHHH
Q 011641 160 AEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEA 239 (480)
Q Consensus 160 ~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~~ 239 (480)
.+|.+.+++.+++++++|+.++..++++.+.++++|+.+....+++.+++++||++|+++|++++++++++||++.+|++
T Consensus 165 ~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~ae~~Kl~~N~~~a~~ia~~nE~~~l~~~ 244 (467)
T 2q3e_A 165 AEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISSINSISALCEA 244 (467)
T ss_dssp CTTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999983221257889999999999832356788899999999999999999999999999999999
Q ss_pred hCCCHHHHHHHhcCCCCCCCCCccCCCCccccchhHhHHHHHHHHHHCCCChhhHHHHHHHHHhHHhHHHHHHHHHHHhc
Q 011641 240 TGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVASMF 319 (480)
Q Consensus 240 ~Gid~~~v~~~~~~~~~~~~~~~~pg~g~gG~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~ 319 (480)
+|+|++++++++++++++++.+++||+||||+|+|||++++++.|++.|++...+++++++++|++|++++++++.+.+.
T Consensus 245 ~Gid~~~v~~~~~~~~~~~~~~~~pg~g~gg~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 324 (467)
T 2q3e_A 245 TGADVEEVATAIGMDQRIGNKFLKASVGFGGSCFQKDVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLF 324 (467)
T ss_dssp HTCCHHHHHHHHHTSTTTCSSSCCCCSCCCSSSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hCcCHHHHHHHHcCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Confidence 99999999999999999888999999999999999999999999999999877889999999999999999999999876
Q ss_pred CcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccc
Q 011641 320 NTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
+.++++||+||||||||||||+||||++.|++.|.++|++|.+|||++..++....+. ++-.+.| ....++
T Consensus 325 ~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~-------~~~~~~~--~~~~~~ 395 (467)
T 2q3e_A 325 NTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLS-------HPGVSED--DQVSRL 395 (467)
T ss_dssp TCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHC-------C--------CHHHHH
T ss_pred cccCCCEEEEEeeccCCCCcchhhChHHHHHHHHHHCCCEEEEEcCccCHHHHhhhhc-------ccccccc--ccccCc
Confidence 6789999999999999999999999999999999999999999999998776544321 0000000 011235
Q ss_pred eEEecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCCCCh--hhhhhcCcEEEEecCC
Q 011641 400 VSVVWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNVVDA--NKLREIGFIVYSIGKP 468 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~~~~--~~~~~~g~~y~~iG~~ 468 (480)
+++++++++++++||+|||+|+|++|+++||+++...|+.|.+|||+||++++ ++++..||.|+||||+
T Consensus 396 ~~~~~~~~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~~~~i~D~r~~~~~~~~~~~~~g~~~~~ig~~ 466 (467)
T 2q3e_A 396 VTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKK 466 (467)
T ss_dssp EEECSSHHHHHTTCSEEEECSCCGGGGGSCHHHHHHHSCSSCEEEESSCTTTTCHHHHHHHTCEEEETTSC
T ss_pred eeecCCHHHHHhCCcEEEEecCChhhhcCCHHHHHHhcCCCCEEEeCCCcCCchHHHHHhcCcEEEEeCCC
Confidence 78888999999999999999999999999999999999988669999999998 8899999999999984
No 9
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=100.00 E-value=7.3e-77 Score=613.07 Aligned_cols=387 Identities=25% Similarity=0.377 Sum_probs=332.8
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||+|||+|+||+++|..|++ |++|++||+++++++.++++..+++|+++++++.+. .+++++++|+++++++||
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~---G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~-~~~l~~ttd~~ea~~~aD 111 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ---NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEK-PLNFRATTDKHDAYRNAD 111 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT---TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHS-CCCEEEESCHHHHHTTCS
T ss_pred CCEEEEECcCHHHHHHHHHHHc---CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhc-cCCeEEEcCHHHHHhCCC
Confidence 5899999999999999999985 799999999999999999999999999999887541 357999999999999999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCcccc
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLA 160 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~ 160 (480)
+||+|||||.+.+ ...+|++++++++++|.+ ++++++||++||++|||++++.+.+.+. .++|+|||++
T Consensus 112 vViiaVPt~~~~~----~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~------~v~~sPe~~~ 180 (432)
T 3pid_A 112 YVIIATPTDYDPK----TNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGID------NVIFSPEFLR 180 (432)
T ss_dssp EEEECCCCEEETT----TTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCC------CEEECCCCCC
T ss_pred EEEEeCCCccccc----cccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhc------cEeecCccCC
Confidence 9999999986542 236899999999999999 9999999999999999999998877542 4789999999
Q ss_pred ccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhc--cCCCCeEEeCCchhHHHhhhhHhHHHHHHHHHHHHHHHHHH
Q 011641 161 EGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAH--WVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCE 238 (480)
Q Consensus 161 ~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~--~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~ 238 (480)
||.+..++++|++||+|+. ++..+++.++|.. +....++..+++++||++|+++|+|++++|+|+||++.+|+
T Consensus 181 ~G~A~~~~l~p~rIvvG~~-----~~~~~~~~~ll~~~~~~~~~~v~~~~~~~AE~~Kl~~N~~~a~~Ia~~nEl~~lae 255 (432)
T 3pid_A 181 EGRALYDNLHPSRIVIGER-----SARAERFADLLKEGAIKQDIPTLFTDSTEAEAIKLFANTYLALRVAYFNELDSYAE 255 (432)
T ss_dssp TTSHHHHHHSCSCEEESSC-----SHHHHHHHHHHHHHCSSSSCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhcccCCceEEecCC-----HHHHHHHHHHHHhhhccCCCeEEecCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999986 4567888888876 22223577889999999999999999999999999999999
Q ss_pred HhCCCHHHHHHHhcCCCCCCCCCccCCCCccccchhHhHHHHHHHHHHCCCChhhHHHHHHHHHhHHhHHHHHHHHHHHh
Q 011641 239 ATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVASM 318 (480)
Q Consensus 239 ~~Gid~~~v~~~~~~~~~~~~~~~~pg~g~gG~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l 318 (480)
++|+|+++|+++++++||||..|++||+||||||||||+++|++. ..|++ .+++++++++|++||+++++++.+.
T Consensus 256 ~~GiD~~~v~~~~~~dprig~~~~~pg~G~GG~C~pkD~~~L~~~--~~~~~--~~li~~~~~~N~~~~~~v~~~i~~~- 330 (432)
T 3pid_A 256 SQGLNSKQIIEGVCLDPRIGNHYNNPSFGYGGYCLPKDTKQLLAN--YESVP--NNIIAAIVDANRTRKDFIADSILAR- 330 (432)
T ss_dssp HTTCCHHHHHHHHHTSTTTCSSSCCCCSCCCTTTHHHHHHHHHHH--TTTSC--CSHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred HcCCCHHHHHHHHccCCCCCcccCCCCCCCcccchhhhHHHHHHH--hcCCc--hhHHHHHHHHHHhhHHHHHHHHHhh-
Confidence 999999999999999999999999999999999999999999754 45777 6899999999999999999999875
Q ss_pred cCcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCccccc
Q 011641 319 FNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVK 398 (480)
Q Consensus 319 ~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (480)
.+++|+||||||||||||+|+||++.|++.|+++|++|.+|||+++.+. +.
T Consensus 331 ----~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~G~~V~~~DP~~~~~~-------------------------~~ 381 (432)
T 3pid_A 331 ----KPKVVGVYRLIMKSGSDNFRASSIQGIMKRIKAKGIPVIIYEPVMQEDE-------------------------FF 381 (432)
T ss_dssp ----CCSSEEEECC-----------CHHHHHHHHHHHTTCCEEEECTTCCSSE-------------------------ET
T ss_pred ----cCCEEEEEeeEeCCCCcchhcChHHHHHHHHHhcCCEEEEECCCCChhh-------------------------cC
Confidence 3789999999999999999999999999999999999999999997431 12
Q ss_pred ceEEecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCCCChh
Q 011641 399 QVSVVWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNVVDAN 453 (480)
Q Consensus 399 ~~~~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~~~~~ 453 (480)
+..++.++++++++||+||+.+.|++|+++ .+. +++|++|..+
T Consensus 382 ~~~~~~~~~~~~~~aD~iv~~~~~~~~~~~-----~~~-------~~tr~~~~~~ 424 (432)
T 3pid_A 382 NSRVVRDLNAFKQEADVIISNRMAEELADV-----ADK-------VYTRDLFGND 424 (432)
T ss_dssp TEEECCCHHHHHHHCSEEECSSCCGGGGGG-----GGG-------EECCCSSTTC
T ss_pred CceEECCHHHHHhcCCEEEECCCChHHHHH-----hhc-------cCCCCCCCCc
Confidence 466789999999999999999999988763 221 4999999754
No 10
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=100.00 E-value=1.7e-75 Score=611.13 Aligned_cols=423 Identities=26% Similarity=0.401 Sum_probs=370.4
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhh-hcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~aD 80 (480)
|||+|||+|+||+++|..|+++ ||+|++||+++++++.++++..+++++++++++.. ...+++++++++++++++||
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~--G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aD 78 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSAR--GHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD 78 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCC
Confidence 7999999999999999999998 99999999999999999999999999999888754 22467999999998899999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCC---CcEEEEecCCCcch-HHHHHHHHHhc-CC--CCceEEe
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKS---DKIVVEKSTVPVKT-AEAIEKILTHN-SK--GIKFQIL 153 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~---~~iVi~~STv~~gt-~~~l~~~l~~~-~~--g~~~~v~ 153 (480)
+||+|||+|.+.++ .+|++++++++++|.+.+++ +++|+.+||+++|+ .+.+.+.+++. +. +.++.+.
T Consensus 79 vviiaVptp~~~~~-----~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~~~g~~~~~~~~v~ 153 (436)
T 1mv8_A 79 VSFICVGTPSKKNG-----DLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVDFGVG 153 (436)
T ss_dssp EEEECCCCCBCTTS-----SBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHHHSCCBTTTBEEE
T ss_pred EEEEEcCCCcccCC-----CcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHHhcCcccCCcEEEE
Confidence 99999999986644 89999999999999999998 99999999999999 66688888764 22 3578899
Q ss_pred eCCccccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHHHHHHHHHHHH
Q 011641 154 SNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAM 233 (480)
Q Consensus 154 ~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~ 233 (480)
++||+..+|.+..++.+++++++|+. ++++.+.++++|+.++. ++..++++++|+.|++.|++++++++++||+
T Consensus 154 ~~Pe~~~~G~~~~~~~~~~~iv~G~~----~~~~~~~~~~l~~~~~~--~v~~~~~~~ae~~Kl~~N~~~a~~ia~~nE~ 227 (436)
T 1mv8_A 154 TNPEFLRESTAIKDYDFPPMTVIGEL----DKQTGDLLEEIYRELDA--PIIRKTVEVAEMIKYTCNVWHAAKVTFANEI 227 (436)
T ss_dssp ECCCCCCTTSHHHHHHSCSCEEEEES----SHHHHHHHHHHHTTSSS--CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECcccccccccchhccCCCEEEEEcC----CHHHHHHHHHHHhccCC--CEEcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998885 47888999999999863 5656899999999999999999999999999
Q ss_pred HHHHHHhCCCHHHHHHHhcCCCCCC--CCCccCCCCccccchhHhHHHHHHHHHHCCCChhhHHHHHHHHHhHHhHHHHH
Q 011641 234 SALCEATGANVSQVAFAVGTDSRIG--PKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFV 311 (480)
Q Consensus 234 ~~l~~~~Gid~~~v~~~~~~~~~~~--~~~~~pg~g~gG~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~ 311 (480)
+.+|+++|+|++++.++++.++|++ ++++.||+||||+|++||+.++.+.|+++|++ .++++++.++|+.||++++
T Consensus 228 ~~l~~~~Gid~~~v~~~~~~~~r~~~~~~~~~pg~g~gg~~~~kD~~~l~~~a~~~g~~--~pl~~~v~~in~~~~~~~~ 305 (436)
T 1mv8_A 228 GNIAKAVGVDGREVMDVICQDHKLNLSRYYMRPGFAFGGSCLPKDVRALTYRASQLDVE--HPMLGSLMRSNSNQVQKAF 305 (436)
T ss_dssp HHHHHHTTSCHHHHHHHHTTCTTTTTSSTTCSCCSCCCSSSHHHHHHHHHHHHHHTTCC--CTTGGGHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHhcCCCCCCCcccCCCCcccccCcCcHhhHHHHHHHHHHcCCC--cHHHHHHHHHHhHhHHHHH
Confidence 9999999999999999999999887 78889999999999999999999999999998 7899999999999999999
Q ss_pred HHHHHHhcCcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHH---HhhhccccCCCCCCC
Q 011641 312 NRVVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQ---RDLTMNKFDWDHPLH 388 (480)
Q Consensus 312 ~~~~~~l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~---~~~~~~~~~~~~~~~ 388 (480)
+++.+. +++||+|||+|||+||+|+|+||++.|++.|.++|++|.+|||+++..... ..++. +++
T Consensus 306 ~~~~~~-----~~~~v~vlGlafK~~~~d~r~s~~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~------~~~- 373 (436)
T 1mv8_A 306 DLITSH-----DTRKVGLLGLSFKAGTDDLRESPLVELAEMLIGKGYELRIFDRNVEYARVHGANKEYIE------SKI- 373 (436)
T ss_dssp HHHTTS-----SCCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECHHHHHHTTSSSCHHHHH------HTS-
T ss_pred HHHHHh-----cCCEEEEEccccCCCCCccccCcHHHHHHHHHHCCCEEEEECCCCChhhccchhhhhcc------ccc-
Confidence 998653 689999999999999999999999999999999999999999995432100 11110 000
Q ss_pred CCCCCcccccceEEecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCCCChhhhhhcCcEEEEecC
Q 011641 389 LQPMSPTMVKQVSVVWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNVVDANKLREIGFIVYSIGK 467 (480)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~~~~~~~~~~g~~y~~iG~ 467 (480)
..... .++.++++++++||+|||+|+|++|+++| .+.|+.+ +|||+||+++++. ||.|+||||
T Consensus 374 ------~~~~~-~~~~~~~~~~~~~d~~vi~~~~~~~~~~~----~~~~~~~-~i~D~r~~~~~~~----g~~~~~ig~ 436 (436)
T 1mv8_A 374 ------PHVSS-LLVSDLDEVVASSDVLVLGNGDELFVDLV----NKTPSGK-KLVDLVGFMPHTT----TAQAEGICW 436 (436)
T ss_dssp ------HHHHT-TBCSCHHHHHHHCSEEEECSCCGGGHHHH----HSCCTTC-EEEESSSCCSSSC----CSSEEESCC
T ss_pred ------ccccc-cccCCHHHHHhCCcEEEEeCCcHHHHhhh----HHhcCCC-EEEECCCCCCccc----CcEEEEecC
Confidence 00001 35678999999999999999999999887 3467766 8999999999764 999999996
No 11
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=100.00 E-value=7.7e-70 Score=562.08 Aligned_cols=396 Identities=22% Similarity=0.335 Sum_probs=342.3
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|+||+++|..|++ ||+|++||+++++++.++++..+++++++++++.. ..+++++++++++++++||+
T Consensus 1 MkI~VIG~G~vG~~~A~~La~---G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~-~~~~l~~t~~~~~~~~~aDv 76 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL---QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKS-KQLSIKATLDSKAAYKEAEL 76 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT---TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHH-SCCCEEEESCHHHHHHHCSE
T ss_pred CEEEEECCCHHHHHHHHHHhC---CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHh-ccCcEEEeCCHHHHhcCCCE
Confidence 799999999999999999996 69999999999999999999999999998887754 24568899998888899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCccccc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAE 161 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~~ 161 (480)
||+|||+|.+.+ +..+|+++++++++++.+ ++++++||.+||+++|+++.+.+.+.+ + .++++||+..|
T Consensus 77 viiavpt~~~~~----~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~-----~-~v~~~Pe~~~~ 145 (402)
T 1dlj_A 77 VIIATPTNYNSR----INYFDTQHVETVIKEVLS-VNSHATLIIKSTIPIGFITEMRQKFQT-----D-RIIFSPEFLRE 145 (402)
T ss_dssp EEECCCCCEETT----TTEECCHHHHHHHHHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTC-----S-CEEECCCCCCT
T ss_pred EEEecCCCcccC----CCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCC-----C-eEEECCccccC
Confidence 999999985321 237899999999999999 999999999999999999988776543 2 57899999999
Q ss_pred cccccccCCCCeEEEecCCCc--chHHHHHHHHHHHhc-cCCCC-eEEeCCchhHHHhhhhHhHHHHHHHHHHHHHHHHH
Q 011641 162 GTAIQDLFNPDRVLIGGRETP--EGQKAVKALKDVYAH-WVPED-RILTTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 162 G~a~~~~~~~~~vviG~~~~~--~~~~~~e~~~~l~~~-~~~~~-~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
|.+..++.+++++++|+.+.. ...+..+.+.++|.. ..+.. +++.+++++|||.|+++|++++++++++||++.+|
T Consensus 146 G~a~~~~~~~~riviG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~l~ 225 (402)
T 1dlj_A 146 SKALYDNLYPSRIIVSCEENDSPKVKADAEKFALLLKSAAKKNNVPVLIMGASEAEAVKLFANTYLALRVAYFNELDTYA 225 (402)
T ss_dssp TSTTHHHHSCSCEEEECCTTSCHHHHHHHHHHHHHHHHHCSCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhcccCCCEEEEeCCCcccchhHHHHHHHHHHHhhhhccCCceEEecChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988899999999986310 011556778888864 43212 47778999999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCCCCCccCCCCccccchhHhHHHHHHHHHHCCCChhhHHHHHHHHHhHHhHHHHHHHHHHH
Q 011641 238 EATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVAS 317 (480)
Q Consensus 238 ~~~Gid~~~v~~~~~~~~~~~~~~~~pg~g~gG~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 317 (480)
+++|+|+++++++++++||++..|+.||+||||||||||++++++.|+ |++ .+++++++++|++||+++++++.+.
T Consensus 226 ~~~Gid~~~v~~~~~~~~ri~~~~~~pg~g~gg~c~~kD~~~l~~~a~--~~~--~~l~~~~~~~N~~~~~~~~~~~~~~ 301 (402)
T 1dlj_A 226 ESRKLNSHMIIQGISYDDRIGMHYNNPSFGYGGYSLPKDTKQLLANYN--NIP--QTLIEAIVSSNNVRKSYIAKQIINV 301 (402)
T ss_dssp HHTTCCHHHHHHHHHTSTTTCSSSCCCCSSCCSSHHHHHHHHHHHHHT--TSS--CSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCHHHHHHHhccCCCCCcCCCCCCCccCCccHHhhHHHHHHHhc--CCC--hHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 999999999999999999999889999999999999999999999885 776 6899999999999999999999998
Q ss_pred hcC-cCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCccc
Q 011641 318 MFN-TVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTM 396 (480)
Q Consensus 318 l~~-~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (480)
+++ .++++||+||||||||||+|+|+||++.|++.|+++|++|.+|||+++... ..
T Consensus 302 ~~~~~~~~~~v~vlGlafK~~~~d~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~--~~--------------------- 358 (402)
T 1dlj_A 302 LKEQESPVKVVGVYRLIMKSNSDNFRESAIKDVIDILKSKDIKIIIYEPMLNKLE--SE--------------------- 358 (402)
T ss_dssp HTTSCCSSCEEEEECCCSSTTCSCCTTCHHHHHHHHHHTSSCEEEEECTTCSCCC--TT---------------------
T ss_pred hhhcCCCCCEEEEEeeeccCCCcccccChHHHHHHHHHHCCCEEEEECCCCChHH--HH---------------------
Confidence 864 678999999999999999999999999999999999999999999976421 10
Q ss_pred ccceEEecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCCCCh
Q 011641 397 VKQVSVVWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNVVDA 452 (480)
Q Consensus 397 ~~~~~~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~~~~ 452 (480)
.+..++.++++++++||++|+.|+|++|+++. + -+.+|.+|..
T Consensus 359 -~~~~~~~~~~~~~~~~d~~v~~~~h~~~~~~~-----~-------~~~~~~~~~~ 401 (402)
T 1dlj_A 359 -DQSVLVNDLENFKKQANIIVTNRYDNELQDVK-----N-------KVYSRDIFGR 401 (402)
T ss_dssp -CCSEECCCHHHHHHHCSEEECSSCCGGGGGGG-----G-------GEECCCCSSC
T ss_pred -cCCeecCCHHHHHhCCcEEEEecCChHHHHHh-----h-------ccccccccCC
Confidence 12466788999999999999999999998742 1 1458888753
No 12
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=100.00 E-value=1.2e-31 Score=265.74 Aligned_cols=248 Identities=17% Similarity=0.206 Sum_probs=202.9
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|+||.++|.+|+++ ||+|++||+++++++.+++. +++++++++++++ ||+
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~~~~~-------------------g~~~~~~~~~~~~-aDv 73 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEW--PGGVTVYDIRIEAMTPLAEA-------------------GATLADSVADVAA-ADL 73 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTS--TTCEEEECSSTTTSHHHHHT-------------------TCEECSSHHHHTT-SSE
T ss_pred CeEEEECcCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHC-------------------CCEEcCCHHHHHh-CCE
Confidence 5899999999999999999998 99999999999988887752 3577889999888 999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCccccc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAE 161 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~~ 161 (480)
||+|||++ ..++++++++.+.++++++||++||++|++++.+.+.+.+.+ ..++.+|....+
T Consensus 74 vi~~vp~~--------------~~~~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g----~~~~~~pv~g~~ 135 (296)
T 3qha_A 74 IHITVLDD--------------AQVREVVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARD----IHIVDAPVSGGA 135 (296)
T ss_dssp EEECCSSH--------------HHHHHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGT----CEEEECCEESCH
T ss_pred EEEECCCh--------------HHHHHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcC----CEEEeCCCcCCH
Confidence 99999964 245777899999999999999999999999999988887653 234567766554
Q ss_pred cccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHHHHHHHHHHHHHHHHHHhC
Q 011641 162 GTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATG 241 (480)
Q Consensus 162 G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~~~G 241 (480)
..+..+. ..+++|++ +++.++++++|+.++. .+++.++++.++++|+++|.+.+.++++++|+..+|+++|
T Consensus 136 ~~a~~g~---l~~~~gg~-----~~~~~~~~~ll~~~g~-~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G 206 (296)
T 3qha_A 136 AAAARGE---LATMVGAD-----REVYERIKPAFKHWAA-VVIHAGEPGAGTRMKLARNMLTFTSYAAACEAMKLAEAAG 206 (296)
T ss_dssp HHHHHTC---EEEEEECC-----HHHHHHHHHHHHHHEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHhcCC---ccEEecCC-----HHHHHHHHHHHHHHcC-CeEEcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4332221 24678875 7899999999999863 4566678999999999999999999999999999999999
Q ss_pred CCHHHH------HHHhcCCCCC-----CCCCcc-CCCCccc-----cchhHhHHHHHHHHHHCCCChhhHHHHHHH
Q 011641 242 ANVSQV------AFAVGTDSRI-----GPKFLN-ASVGFGG-----SCFQKDILNLVYICECNGLPEVAEYWKQVI 300 (480)
Q Consensus 242 id~~~v------~~~~~~~~~~-----~~~~~~-pg~g~gG-----~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~ 300 (480)
+|++++ .++++..+.- +++++. .++||++ .|++||+.++.+.|++.|++ .++++.+.
T Consensus 207 ~d~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~f~~~~~~~~~~~KD~~~~~~~a~~~g~~--~p~~~~~~ 280 (296)
T 3qha_A 207 LDLQALGRVVRHTDALTGGPGAIMVRDNMKDLEPDNFLYQPFLHTRGLGEKDLSLALALGEAVSVD--LPLARLAY 280 (296)
T ss_dssp CCHHHHHHHHHHHHHHHCCGGGGCCCSSCSCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHH
T ss_pred CCHHHHhhhcchHHHHhcCcccCHHhhchhhhhcCCCCCchhhhhhHHHHHHHHHHHHHHHHcCCC--ChHHHHHH
Confidence 999999 9988753210 223332 3678888 99999999999999999998 56666554
No 13
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=100.00 E-value=1.3e-31 Score=265.36 Aligned_cols=250 Identities=17% Similarity=0.157 Sum_probs=207.5
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|+||+|||+|.||.+||.+|.++ ||+|++|||++++++.+.+. +.+..+++.++++.||
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~--G~~v~v~dr~~~~~~~l~~~-------------------Ga~~a~s~~e~~~~~d 61 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKA--GYLLNVFDLVQSAVDGLVAA-------------------GASAARSARDAVQGAD 61 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHT-------------------TCEECSSHHHHHTTCS
T ss_pred cCEEEEeeehHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHHHHc-------------------CCEEcCCHHHHHhcCC
Confidence 78999999999999999999998 99999999999999988752 3577889999999999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHH---HHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCc
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAAR---VIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~---~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
+||+|||++ ..+++++. .+.+.++++++||++||+.|.+++++.+.+++.+ ..++.+|.
T Consensus 62 vv~~~l~~~--------------~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G----~~~lDaPV 123 (300)
T 3obb_A 62 VVISMLPAS--------------QHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERG----LAMLDAPV 123 (300)
T ss_dssp EEEECCSCH--------------HHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTT----CEEEECCE
T ss_pred ceeecCCch--------------HHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcC----CEEEecCC
Confidence 999999864 34556654 3667888999999999999999999999888764 35678998
Q ss_pred cccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHHHHHHHHHHHHHHHH
Q 011641 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
...+..+..+.+ .+++||+ ++++++++++|+.+++ ..++.++.+.+..+|+++|.+.+.+++.+.|...++
T Consensus 124 sGg~~~A~~G~L---~imvGG~-----~~~~~~~~p~l~~~g~-~i~~~G~~G~g~~~Kl~~N~l~~~~~~a~aEa~~la 194 (300)
T 3obb_A 124 SGGTAGAAAGTL---TFMVGGD-----AEALEKARPLFEAMGR-NIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALG 194 (300)
T ss_dssp ESCHHHHHHTCE---EEEEESC-----HHHHHHHHHHHHHHEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHhCCE---EEEEeCC-----HHHHHHHHHHHHHhCC-CEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877766655433 4788996 8899999999999974 456778999999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCCC--------------CCc--cCCCCccccchhHhHHHHHHHHHHCCCChhhHHHHHHH
Q 011641 238 EATGANVSQVAFAVGTDSRIGP--------------KFL--NASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVI 300 (480)
Q Consensus 238 ~~~Gid~~~v~~~~~~~~~~~~--------------~~~--~pg~g~gG~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~ 300 (480)
++.|+|++.+.++++..+..++ ... .+.++|....+.||+.+..+.|++.|++ .++.+.+.
T Consensus 195 ~~~Gld~~~~~~vl~~~~~~s~~~~~~~p~~~~~~~~~~~~~~~~~f~~~l~~KDl~l~~~~A~~~g~~--~p~~~~a~ 271 (300)
T 3obb_A 195 VANGLEAKVLAEIMRRSSGGNWALEVYNPWPGVMENAPASRDYSGGFMAQLMAKDLGLAQEAAQASASS--TPMGSLAL 271 (300)
T ss_dssp HHTTCCHHHHHHHHHTSTTCCHHHHHCCCSTTTSTTSGGGGTTCSSSBHHHHHHHHHHHHHHHHHHTCC--CHHHHHHH
T ss_pred HhcCCCHHHHHHHHHhCcccchHHHhhccccchhhhccccccCCccchHHHHHHHHHHHHHHHHHcCCC--ChHHHHHH
Confidence 9999999999999986532111 001 2456788889999999999999999998 56555544
No 14
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=100.00 E-value=2.3e-31 Score=266.64 Aligned_cols=249 Identities=16% Similarity=0.122 Sum_probs=205.0
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+|||+|||+|+||.++|..|+++ |++|++||+++++++.+.+. +++.++++++++++||
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~l~~~-------------------g~~~~~~~~e~~~~aD 89 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEA--GYALQVWNRTPARAASLAAL-------------------GATIHEQARAAARDAD 89 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTT-------------------TCEEESSHHHHHTTCS
T ss_pred CCEEEEECccHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHHHHC-------------------CCEeeCCHHHHHhcCC
Confidence 47999999999999999999998 99999999999999988753 3577889999999999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHH--HHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCcc
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAAR--VIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEF 158 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~--~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
+||+|||++. .++.++. ++.+.++++++||+.||++|++++.+.+.+.+.+ ..++.+|..
T Consensus 90 vVi~~vp~~~--------------~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g----~~~~~~pv~ 151 (320)
T 4dll_A 90 IVVSMLENGA--------------VVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALG----IAHLDTPVS 151 (320)
T ss_dssp EEEECCSSHH--------------HHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTT----CEEEECCEE
T ss_pred EEEEECCCHH--------------HHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcC----CEEEeCCCc
Confidence 9999998642 3466666 7788899999999999999999999888877653 244567876
Q ss_pred ccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHHHHHHHHHHHHHHHHH
Q 011641 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCE 238 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~ 238 (480)
..+..+..+ ...+++|++ +++.++++++|+.+ . .+++.++.+.++++|+++|.+.+.++++++|+..+|+
T Consensus 152 g~~~~a~~g---~l~i~~gg~-----~~~~~~~~~ll~~~-~-~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~ 221 (320)
T 4dll_A 152 GGTVGAEQG---TLVIMAGGK-----PADFERSLPLLKVF-G-RATHVGPHGSGQLTKLANQMIVGITIGAVAEALLFAT 221 (320)
T ss_dssp CHHHHHHHT---CEEEEEESC-----HHHHHHHHHHHHHH-E-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHhHHhcC---CeeEEeCCC-----HHHHHHHHHHHHhc-C-CEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 655333322 124778875 78999999999998 4 5667778999999999999999999999999999999
Q ss_pred HhCCCHHHHHHHhcCCCCCC-------CCCc--cCCCCccccchhHhHHHHHHHHHHCCCChhhHHHHHHH
Q 011641 239 ATGANVSQVAFAVGTDSRIG-------PKFL--NASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVI 300 (480)
Q Consensus 239 ~~Gid~~~v~~~~~~~~~~~-------~~~~--~pg~g~gG~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~ 300 (480)
+.|+|++++.++++.++..+ +.++ .+++||++.|++||+.++.+.+++.|++ .++.+.+.
T Consensus 222 ~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~gf~~~~~~KDl~~~~~~a~~~g~~--~p~~~~~~ 290 (320)
T 4dll_A 222 KGGADMAKVKEAITGGFADSRVLQLHGQRMVERDFAPRARLSIQLKDMRNALATAQEIGFD--APITGLFE 290 (320)
T ss_dssp HTSCCHHHHHHHHTTSTTCBHHHHTHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHH
T ss_pred HcCCCHHHHHHHHHcccccCHHHHHhhhhhccCCCCCcccHHHHHHHHHHHHHHHHHcCCC--ChHHHHHH
Confidence 99999999999998765211 1222 2467899999999999999999999998 56666544
No 15
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.98 E-value=2e-31 Score=265.94 Aligned_cols=251 Identities=12% Similarity=0.110 Sum_probs=205.1
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||+|||+|+||.++|..|+++ ||+|++||+++++++.+.+. +++.++++++++++||
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~l~~~-------------------g~~~~~~~~~~~~~aD 79 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKN--GFKVTVWNRTLSKCDELVEH-------------------GASVCESPAEVIKKCK 79 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSGGGGHHHHHT-------------------TCEECSSHHHHHHHCS
T ss_pred CCEEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHC-------------------CCeEcCCHHHHHHhCC
Confidence 68999999999999999999998 99999999999998887752 3567789999899999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHH---HHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCc
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAA---RVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~---~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
+||+|||++. .+++++ +++.+.++++++||++||++|++++.+.+.+++.+ ..++.+|.
T Consensus 80 vvi~~vp~~~--------------~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g----~~~v~~pv 141 (310)
T 3doj_A 80 YTIAMLSDPC--------------AALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKG----GRFVEGPV 141 (310)
T ss_dssp EEEECCSSHH--------------HHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTT----CEEEECCE
T ss_pred EEEEEcCCHH--------------HHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcC----CEEEeCCC
Confidence 9999998652 346666 77888899999999999999999999888887653 23456787
Q ss_pred cccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHHHHHHHHHHHHHHHH
Q 011641 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
...+..+..+ ...+++|++ +++.++++++|+.++. .+++.++++.++++|+++|.+.+.++++++|+..+|
T Consensus 142 ~g~~~~a~~g---~l~i~~gg~-----~~~~~~~~~ll~~~g~-~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~ 212 (310)
T 3doj_A 142 SGSKKPAEDG---QLIILAAGD-----KALFEESIPAFDVLGK-RSFYLGQVGNGAKMKLIVNMIMGSMMNAFSEGLVLA 212 (310)
T ss_dssp ECCHHHHHHT---CEEEEEEEC-----HHHHHHHHHHHHHHEE-EEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChhHHhcC---CeEEEEcCC-----HHHHHHHHHHHHHhCC-CEEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6555443322 224677875 7899999999999863 455666899999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCCC-------CCc--cCCCCccccchhHhHHHHHHHHHHCCCChhhHHHHHHHH
Q 011641 238 EATGANVSQVAFAVGTDSRIGP-------KFL--NASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIK 301 (480)
Q Consensus 238 ~~~Gid~~~v~~~~~~~~~~~~-------~~~--~pg~g~gG~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~ 301 (480)
++.|+|++++.++++.++..++ .++ .+.+||++.|+.||+.++.+.|++.|++ .++.+.+.+
T Consensus 213 ~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~KDl~~~~~~a~~~g~~--~p~~~~~~~ 283 (310)
T 3doj_A 213 DKSGLSSDTLLDILDLGAMTNPMFKGKGPSMNKSSYPPAFPLKHQQKDMRLALALGDENAVS--MPVAAAANE 283 (310)
T ss_dssp HHTTSCHHHHHHHHHHSTTCCHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHhcccccHHHHHHhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHcCCC--ChHHHHHHH
Confidence 9999999999999987642211 122 3467899999999999999999999998 566665443
No 16
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.98 E-value=3.2e-31 Score=262.56 Aligned_cols=248 Identities=16% Similarity=0.171 Sum_probs=197.3
Q ss_pred EEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcEE
Q 011641 3 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADIV 82 (480)
Q Consensus 3 kI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDvV 82 (480)
||||||+|+||.+||.+|+++ ||+|++||+++++++.+.+. +.+.++++.++++.||+|
T Consensus 7 kIgfIGLG~MG~~mA~~L~~~--G~~V~v~dr~~~~~~~l~~~-------------------G~~~~~s~~e~~~~~dvv 65 (297)
T 4gbj_A 7 KIAFLGLGNLGTPIAEILLEA--GYELVVWNRTASKAEPLTKL-------------------GATVVENAIDAITPGGIV 65 (297)
T ss_dssp EEEEECCSTTHHHHHHHHHHT--TCEEEEC-------CTTTTT-------------------TCEECSSGGGGCCTTCEE
T ss_pred cEEEEecHHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHc-------------------CCeEeCCHHHHHhcCCce
Confidence 899999999999999999998 99999999999988766542 356778899999999999
Q ss_pred EEeccCCCCCCCCCCCCCCChHHHHHH-HHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCccccc
Q 011641 83 FVSVNTPTKTQGLGAGKAADLTYWESA-ARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAE 161 (480)
Q Consensus 83 ii~Vptp~~~~~~~~~~~~d~~~v~~~-~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~~ 161 (480)
|+|||++. .++++ ...+.+.+++++++|++||+.|.+++++.+.+.+.+ +.++.+|....+
T Consensus 66 i~~l~~~~--------------~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g----~~~ldapVsGg~ 127 (297)
T 4gbj_A 66 FSVLADDA--------------AVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYG----AHYVGAPIFARP 127 (297)
T ss_dssp EECCSSHH--------------HHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTT----CEEEECCEECCH
T ss_pred eeeccchh--------------hHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcC----CceecCCcCCCc
Confidence 99999652 22333 255778889999999999999999999998888764 456799998877
Q ss_pred cccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeC-CchhHHHhhhhHhHHHHHHHHHHHHHHHHHHHh
Q 011641 162 GTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTT-NLWSAELSKLAANAFLAQRISSVNAMSALCEAT 240 (480)
Q Consensus 162 G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~-~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~~~ 240 (480)
..+..+.. .+++|++ ++++++++++|+.++. ..++.+ +++.++.+|+++|.+.+.+++.++|...+|+++
T Consensus 128 ~~a~~g~l---~im~gG~-----~~~~~~~~~~l~~~g~-~i~~~g~~~G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~~ 198 (297)
T 4gbj_A 128 EAVRAKVG---NICLSGN-----AGAKERIKPIVENFVK-GVFDFGDDPGAANVIKLAGNFMIACSLEMMGEAFTMAEKN 198 (297)
T ss_dssp HHHHHTCC---EEEEEEC-----HHHHHHHHHHHHTTCS-EEEECCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccccccc---eeecccc-----hhHHHHHHHHHHHhhC-CeEEecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 66654433 4788886 7899999999999973 345566 579999999999999999999999999999999
Q ss_pred CCCHHHHHHHhcCCCCCCCC-------Cc--cCC-CCccccchhHhHHHHHHHHHHCCCChhhHHHHHHH
Q 011641 241 GANVSQVAFAVGTDSRIGPK-------FL--NAS-VGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVI 300 (480)
Q Consensus 241 Gid~~~v~~~~~~~~~~~~~-------~~--~pg-~g~gG~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~ 300 (480)
|+|+++++++++..+.-++. ++ .+. .||....+.||+.+.++.|++.|++ .++.+.+.
T Consensus 199 Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~p~~f~~~l~~KDl~l~~~~A~~~g~~--~p~~~~~~ 266 (297)
T 4gbj_A 199 GISRQSIYEMLTSTLFAAPIFQNYGKLVASNTYEPVAFRFPLGLKDINLTLQTASDVNAP--MPFADIIR 266 (297)
T ss_dssp TCCHHHHHHHHHTTTTCSHHHHHHHHHHHHTCCCSCSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHH
T ss_pred CCCHHHHHHHHHhhcccCchhhccCccccCCCCCCccchhHHHHHHHHHHHHHHHHhCCC--ChHHHHHH
Confidence 99999999999876532221 11 222 4788899999999999999999998 56666544
No 17
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.97 E-value=2.4e-30 Score=255.20 Aligned_cols=251 Identities=16% Similarity=0.101 Sum_probs=205.2
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.|||+|||+|+||.++|..|+++ ||+|++||+++++++.+.+. +++.++++++++++||
T Consensus 1 s~~i~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~-------------------g~~~~~~~~~~~~~aD 59 (287)
T 3pef_A 1 SQKFGFIGLGIMGSAMAKNLVKA--GCSVTIWNRSPEKAEELAAL-------------------GAERAATPCEVVESCP 59 (287)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSGGGGHHHHHT-------------------TCEECSSHHHHHHHCS
T ss_pred CCEEEEEeecHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHC-------------------CCeecCCHHHHHhcCC
Confidence 48999999999999999999998 99999999999998887753 3577889999899999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHH---HHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCc
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAA---RVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~---~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
+||+|||++ ..+++++ +++.+.++++++|+++||++|.+++.+.+.+++.+ ..++.+|.
T Consensus 60 vvi~~vp~~--------------~~~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g----~~~~~~pv 121 (287)
T 3pef_A 60 VTFAMLADP--------------AAAEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKG----GRFLEAPV 121 (287)
T ss_dssp EEEECCSSH--------------HHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTT----CEEEECCE
T ss_pred EEEEEcCCH--------------HHHHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhC----CEEEECCC
Confidence 999999864 2356777 78888999999999999999999999888877653 23455787
Q ss_pred cccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHHHHHHHHHHHHHHHH
Q 011641 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
...+..+..+ ...+++|++ +++.++++++|+.++. .+++.++.+.++++|+++|.+.+.++++++|+..+|
T Consensus 122 ~g~~~~a~~g---~l~~~~gg~-----~~~~~~~~~ll~~~g~-~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~ 192 (287)
T 3pef_A 122 SGSKKPAEDG---TLIILAAGD-----RNLYDEAMPGFEKMGK-KIIHLGDVGKGAEMKLVVNMVMGGMMACFCEGLALG 192 (287)
T ss_dssp ECCHHHHHHT---CEEEEEEEC-----HHHHHHHHHHHHHHEE-EEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHhcC---CEEEEEeCC-----HHHHHHHHHHHHHhCC-CeEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6655443222 124677875 7899999999999863 455667899999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCC-------CCCc--cCCCCccccchhHhHHHHHHHHHHCCCChhhHHHHHHHH
Q 011641 238 EATGANVSQVAFAVGTDSRIG-------PKFL--NASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIK 301 (480)
Q Consensus 238 ~~~Gid~~~v~~~~~~~~~~~-------~~~~--~pg~g~gG~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~ 301 (480)
++.|+|++++.++++.++-.+ ..++ .+.+||++.|+.||+.++.+.|++.|++ .++.+.+.+
T Consensus 193 ~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~--~p~~~~~~~ 263 (287)
T 3pef_A 193 EKAGLATDAILDVIGAGAMANPMFALKGGLIRDRNFAPAFPLKHMQKDLRLAVALGDRVGQP--LVASAAANE 263 (287)
T ss_dssp HHTTCCHHHHHHHHHHSTTCCHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHHTCC--CHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHhcccccHHHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHcCCC--ChHHHHHHH
Confidence 999999999999998754211 1122 2467899999999999999999999998 566665543
No 18
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.97 E-value=2e-30 Score=255.79 Aligned_cols=251 Identities=17% Similarity=0.144 Sum_probs=203.3
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||+|||+|+||.++|..|+++ ||+|++||+++++++.+.+. +++.++++++++++||
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~-------------------g~~~~~~~~~~~~~ad 59 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRA--GFDVTVWNRNPAKCAPLVAL-------------------GARQASSPAEVCAACD 59 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHH--TCCEEEECSSGGGGHHHHHH-------------------TCEECSCHHHHHHHCS
T ss_pred CCeEEEEccCHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHC-------------------CCeecCCHHHHHHcCC
Confidence 78999999999999999999998 99999999999988887652 3567789999899999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHH---HHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCc
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAA---RVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~---~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
+||+|||++ ..+++++ +++.+.++++++|++.||+.|++++.+.+.+++.+ ..++.+|.
T Consensus 60 vvi~~v~~~--------------~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g----~~~~~~pv 121 (287)
T 3pdu_A 60 ITIAMLADP--------------AAAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARG----GRFLEAPV 121 (287)
T ss_dssp EEEECCSSH--------------HHHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTT----CEEEECCE
T ss_pred EEEEEcCCH--------------HHHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcC----CEEEECCc
Confidence 999999864 2356666 77788889999999999999999999888877653 23456676
Q ss_pred cccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHHHHHHHHHHHHHHHH
Q 011641 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
...+..+..+. ..+++|++ ++..++++++|+.++. .+++.++++.+++.|+++|.+.+.++++++|+..+|
T Consensus 122 ~g~~~~a~~g~---l~~~~gg~-----~~~~~~~~~ll~~~g~-~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~ 192 (287)
T 3pdu_A 122 SGTKKPAEDGT---LIILAAGD-----QSLFTDAGPAFAALGK-KCLHLGEVGQGARMKLVVNMIMGQMMTALGEGMALG 192 (287)
T ss_dssp ECCHHHHHHTC---EEEEEEEC-----HHHHHHTHHHHHHHEE-EEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHhcCC---EEEEEeCC-----HHHHHHHHHHHHHhCC-CEEEcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65543332221 14677875 7899999999999863 345667899999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCC-------CCCc--cCCCCccccchhHhHHHHHHHHHHCCCChhhHHHHHHHH
Q 011641 238 EATGANVSQVAFAVGTDSRIG-------PKFL--NASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIK 301 (480)
Q Consensus 238 ~~~Gid~~~v~~~~~~~~~~~-------~~~~--~pg~g~gG~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~ 301 (480)
++.|+|++++.++++.++..+ ..++ .+.+||++.|+.||..++.+.|++.|++ .++.+.+.+
T Consensus 193 ~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~--~p~~~~~~~ 263 (287)
T 3pdu_A 193 RNCGLDGGQLLEVLDAGAMANPMFKGKGQMLLSGEFPTSFPLKHMQKDLRLAVELGDRLGQP--LHGAATANE 263 (287)
T ss_dssp HHTTCCHHHHHHHHHHSTTCCHHHHHHHHHHHHTCCCCSSBHHHHHHHHHHHHHHHHHHTCC--CHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHhccccChHHHhhccccccCCCCCCCcHHHHHHHHHHHHHHHHHcCCC--ChHHHHHHH
Confidence 999999999999998754211 1122 2467899999999999999999999998 566665543
No 19
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.97 E-value=6.8e-30 Score=253.96 Aligned_cols=251 Identities=14% Similarity=0.102 Sum_probs=200.2
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|+||.++|..|+++ |++|++||+++++++.+.+. +...+++++++++++||+
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~------------------g~~~~~~~~~e~~~~aDv 67 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRA--GLSTWGADLNPQACANLLAE------------------GACGAAASAREFAGVVDA 67 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT------------------TCSEEESSSTTTTTTCSE
T ss_pred CeEEEECCCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHc------------------CCccccCCHHHHHhcCCE
Confidence 7899999999999999999998 99999999999999988753 112236778888899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHH---HHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCcc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAA---RVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEF 158 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~---~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
||+|||++. .++.++ +++.+.++++++||+.||++|++++.+.+.+.+.+ ..++.+|..
T Consensus 68 vi~~vp~~~--------------~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g----~~~~~~pv~ 129 (303)
T 3g0o_A 68 LVILVVNAA--------------QVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALN----LNMLDAPVS 129 (303)
T ss_dssp EEECCSSHH--------------HHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTT----CEEEECCEE
T ss_pred EEEECCCHH--------------HHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcC----CeEEeCCCC
Confidence 999998642 345555 67788899999999999999999999888777643 234457766
Q ss_pred ccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCC-chhHHHhhhhHhHHHHHHHHHHHHHHHHH
Q 011641 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTN-LWSAELSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~-~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
..+..+..+ ...+++|++ +++.++++++|+.++. ..++.++ ++.+++.|+++|.+.++++++++|+..+|
T Consensus 130 g~~~~a~~g---~l~~~~gg~-----~~~~~~~~~ll~~~g~-~~~~~~~~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~ 200 (303)
T 3g0o_A 130 GGAVKAAQG---EMTVMASGS-----EAAFTRLKPVLDAVAS-NVYRISDTPGAGSTVKIIHQLLAGVHIAAAAEAMALA 200 (303)
T ss_dssp SCHHHHHTT---CEEEEEECC-----HHHHHHHHHHHHHHEE-EEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhhhhcC---CeEEEeCCC-----HHHHHHHHHHHHHHCC-CEEECCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555433222 124677764 7899999999999863 3455666 89999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCCC-------CCc--cCCCCccccchhHhHHHHHHHHHHCCCChhhHHHHHHHH
Q 011641 238 EATGANVSQVAFAVGTDSRIGP-------KFL--NASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIK 301 (480)
Q Consensus 238 ~~~Gid~~~v~~~~~~~~~~~~-------~~~--~pg~g~gG~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~ 301 (480)
++.|+|++++.++++.....++ .++ .+.+||+..|+.||+.++++.|++.|++ .++.+.+.+
T Consensus 201 ~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~kD~~~~~~~a~~~g~~--~p~~~~~~~ 271 (303)
T 3g0o_A 201 ARAGIPLDVMYDVVTHAAGNSWMFENRMQHVVDGDYTPRSAVDIFVKDLGLVADTAKALRFP--LPLASTALN 271 (303)
T ss_dssp HHTTCCHHHHHHHHTTSTTCCHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHhcccCCHHHHhhhHHHhcCCCCCCCchHHHHHHHHHHHHHHHHcCCC--ChHHHHHHH
Confidence 9999999999999987532111 122 2457899999999999999999999998 566665543
No 20
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.97 E-value=1.8e-29 Score=250.70 Aligned_cols=250 Identities=17% Similarity=0.168 Sum_probs=200.7
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||+|||+|+||.++|..|+++ |++|++||+++++++.+.+. +++.++++++++++||
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~--G~~V~~~d~~~~~~~~~~~~-------------------g~~~~~~~~~~~~~aD 61 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKA--GYLLNVFDLVQSAVDGLVAA-------------------GASAARSARDAVQGAD 61 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHT-------------------TCEECSSHHHHHTTCS
T ss_pred CCEEEEEeecHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHHHHC-------------------CCeEcCCHHHHHhCCC
Confidence 78999999999999999999998 99999999999999888752 3567789999899999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHH---HHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCc
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAAR---VIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~---~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
+||+|||++. .++.++. ++.+.++++++|++.||+.+.+++.+.+.+++.+ .. ++.+|.
T Consensus 62 vvi~~vp~~~--------------~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g--~~--~~~~pv 123 (302)
T 2h78_A 62 VVISMLPASQ--------------HVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERG--LA--MLDAPV 123 (302)
T ss_dssp EEEECCSCHH--------------HHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTT--CC--EEECCE
T ss_pred eEEEECCCHH--------------HHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcC--CE--EEEEEc
Confidence 9999998642 3566776 7888899999999999999999988888877643 22 345675
Q ss_pred cccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHHHHHHHHHHHHHHHH
Q 011641 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
...+..+... ...+++|+. ++..+.++++|+.++. .+++.++.+.++++|+++|.+.+.++++++|+..+|
T Consensus 124 ~~~~~~~~~g---~l~~~~~g~-----~~~~~~~~~ll~~~g~-~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~ 194 (302)
T 2h78_A 124 SGGTAGAAAG---TLTFMVGGD-----AEALEKARPLFEAMGR-NIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALG 194 (302)
T ss_dssp ESCHHHHHHT---CEEEEEESC-----HHHHHHHHHHHHHHEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCChhhHhcC---CceEEeCCC-----HHHHHHHHHHHHHhCC-CeEEcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5443222111 113567764 7889999999999863 456667899999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCC-------C-------CCc--cCCCCccccchhHhHHHHHHHHHHCCCChhhHHHHHHH
Q 011641 238 EATGANVSQVAFAVGTDSRIG-------P-------KFL--NASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVI 300 (480)
Q Consensus 238 ~~~Gid~~~v~~~~~~~~~~~-------~-------~~~--~pg~g~gG~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~ 300 (480)
++.|+|++++.++++..+..+ + .++ .+.+||++.|+.||+.++++.|++.|++ .++.+.+.
T Consensus 195 ~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~kD~~~~~~~a~~~g~~--~p~~~~~~ 271 (302)
T 2h78_A 195 VANGLEAKVLAEIMRRSSGGNWALEVYNPWPGVMENAPASRDYSGGFMAQLMAKDLGLAQEAAQASASS--TPMGSLAL 271 (302)
T ss_dssp HHTTCCHHHHHHHHHTSTTCCHHHHHCCCSTTTSTTSGGGGTTCSSSBHHHHHHHHHHHHHHHHHHTCC--CHHHHHHH
T ss_pred HHcCCCHHHHHHHHHcCCCCCHHHHHhCCCcccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHcCCC--ChHHHHHH
Confidence 999999999999998764211 1 122 2346899999999999999999999998 56555544
No 21
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.96 E-value=3.9e-28 Score=242.72 Aligned_cols=242 Identities=12% Similarity=0.082 Sum_probs=181.3
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCC-CeEEEEECCH-------HHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEec-C
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPS-IEVAVVDISV-------SRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFST-D 71 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G-~~V~~~D~~~-------~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~-d 71 (480)
+|||+|||+|+||.++|..|+++ | ++|++||+++ +..+.+.+. + + ++ +
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~--G~~~V~~~dr~~~~~~~~~~~~~~~~~~------------------g-~--~~~s 80 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGR--NAARLAAYDLRFNDPAASGALRARAAEL------------------G-V--EPLD 80 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCSEEEEECGGGGCTTTHHHHHHHHHHT------------------T-C--EEES
T ss_pred CCeEEEECccHHHHHHHHHHHHc--CCCeEEEEeCCCccccchHHHHHHHHHC------------------C-C--CCCC
Confidence 47999999999999999999998 9 9999999997 344443321 2 3 44 6
Q ss_pred HHHhhccCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceE
Q 011641 72 VEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQ 151 (480)
Q Consensus 72 ~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~ 151 (480)
+++++++||+||+|||++. ..+.++++.+.++++++||++||++|++++.+.+.+++.+ ..
T Consensus 81 ~~e~~~~aDvVi~avp~~~---------------~~~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g--~~-- 141 (317)
T 4ezb_A 81 DVAGIACADVVLSLVVGAA---------------TKAVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGK--GS-- 141 (317)
T ss_dssp SGGGGGGCSEEEECCCGGG---------------HHHHHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSS--CE--
T ss_pred HHHHHhcCCEEEEecCCHH---------------HHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcC--Ce--
Confidence 7788899999999999653 1334588899999999999999999999999988887653 22
Q ss_pred EeeCCccccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCC-chhHHHhhhhHhHHHHHHHHHH
Q 011641 152 ILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTN-LWSAELSKLAANAFLAQRISSV 230 (480)
Q Consensus 152 v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~-~~~ae~~Kl~~N~~~~~~ia~~ 230 (480)
++.+|....+. +..+ ...+++|+. ++ ++++++|+.++. ..++.++ ++.|+++|+++|++.+++++++
T Consensus 142 ~~d~pv~g~~~-a~~g---~l~i~vgg~-----~~--~~~~~ll~~~g~-~v~~~g~~~g~a~~~Kl~~N~~~~~~~~~~ 209 (317)
T 4ezb_A 142 FVEGAVMARVP-PYAE---KVPILVAGR-----RA--VEVAERLNALGM-NLEAVGETPGQASSLKMIRSVMIKGVEALL 209 (317)
T ss_dssp EEEEEECSCST-TTGG---GSEEEEEST-----TH--HHHHHHHHTTTC-EEEEEESSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeccCCCCch-hhcC---CEEEEEeCC-----hH--HHHHHHHHHhCC-CeEEeCCCcCHHHHHHHHHHHHHHHHHHHH
Confidence 23444433221 1111 124788886 22 789999999863 4455665 8999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHhcCCC-CCC-----CCCcc--CCCCccccchhHhHHHHHHHHHHCCCChhhHHHHHHHHH
Q 011641 231 NAMSALCEATGANVSQVAFAVGTDS-RIG-----PKFLN--ASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKI 302 (480)
Q Consensus 231 nE~~~l~~~~Gid~~~v~~~~~~~~-~~~-----~~~~~--pg~g~gG~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~ 302 (480)
+|+..+|+++|+|+ ++++.+..+. ... ..++. +++||+ ++||+..+.+.|++.|++ .++++.+.++
T Consensus 210 ~E~~~la~~~Gid~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~---~~KDl~~~~~~a~~~g~~--~pl~~~~~~~ 283 (317)
T 4ezb_A 210 IEALSSAERAGVTE-RILDSVQETFPGLDWRDVADYYLSRTFEHGAR---RVTEMTEAAETIESFGLN--APMSRAACET 283 (317)
T ss_dssp HHHHHHHHHTTCHH-HHHHHHHHHSTTSCHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHTTTCC--CHHHHHHHHH
T ss_pred HHHHHHHHHcCCCH-HHHHHHHhcCccccHHHhhhhhhcCCCCCCcc---hHHHHHHHHHHHHHcCCC--ChHHHHHHHH
Confidence 99999999999999 5777766432 211 11221 234444 699999999999999998 6666665543
No 22
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.95 E-value=1.6e-27 Score=237.84 Aligned_cols=248 Identities=11% Similarity=0.062 Sum_probs=188.6
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCC-eEEEEECC--HHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDIS--VSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~--~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (480)
||||+|||+|+||.++|..|+++ |+ +|++||++ +++.+.+.+. +++.+++++++++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~--G~~~V~~~dr~~~~~~~~~~~~~-------------------g~~~~~~~~e~~~ 82 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA--GAIDMAAYDAASAESWRPRAEEL-------------------GVSCKASVAEVAG 82 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH--SCCEEEEECSSCHHHHHHHHHHT-------------------TCEECSCHHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHC--CCCeEEEEcCCCCHHHHHHHHHC-------------------CCEEeCCHHHHHh
Confidence 58999999999999999999998 99 99999997 5777766542 3567788888899
Q ss_pred cCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCc
Q 011641 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPE 157 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
+||+||+|||++. ..++++++.+.++++++||+.||+.|++++.+.+.+.+...|. .++.+|.
T Consensus 83 ~aDvVi~~vp~~~---------------~~~~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~--~~vd~pv 145 (312)
T 3qsg_A 83 ECDVIFSLVTAQA---------------ALEVAQQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSA--QYAAVAV 145 (312)
T ss_dssp HCSEEEECSCTTT---------------HHHHHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTC--EEEEEEE
T ss_pred cCCEEEEecCchh---------------HHHHHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCC--eEEeccc
Confidence 9999999999753 1346688999999999999999999999999888776652122 2344555
Q ss_pred cccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCC-chhHHHhhhhHhHHHHHHHHHHHHHHHH
Q 011641 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTN-LWSAELSKLAANAFLAQRISSVNAMSAL 236 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~-~~~ae~~Kl~~N~~~~~~ia~~nE~~~l 236 (480)
...+..+ .+ ...+++|+. ++ ++++++|+.++. ..++.++ ++.|+++|+++|.+.+.++++++|++.+
T Consensus 146 ~g~~~~~-~g---~l~i~vgg~-----~~--~~~~~ll~~~g~-~~~~~g~~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~l 213 (312)
T 3qsg_A 146 MSAVKPH-GH---RVPLVVDGD-----GA--RRFQAAFTLYGC-RIEVLDGEVGGAALLKMCRSAVLKGLEALFLEALAA 213 (312)
T ss_dssp CSCSTTT-GG---GSEEEEEST-----TH--HHHHHHHHTTTC-EEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCchhh-cC---CEEEEecCC-----hH--HHHHHHHHHhCC-CeEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4433222 11 225778886 22 889999999863 3445555 8999999999999999999999999999
Q ss_pred HHHhCCCHHHHHHHhcCCC--C----CCCCCcc--CCCCccccchhHhHHHHHHHHHHCCCChhhHHHHHHHHHhH
Q 011641 237 CEATGANVSQVAFAVGTDS--R----IGPKFLN--ASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKIND 304 (480)
Q Consensus 237 ~~~~Gid~~~v~~~~~~~~--~----~~~~~~~--pg~g~gG~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~ 304 (480)
|+++|+|+ ++++.++.+. + ++..++. +++||. +.||+..+++.+++.|++ .++++.+.+.-+
T Consensus 214 a~~~Gld~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~---~~KDl~~~~~~a~~~g~~--~pl~~~~~~~~~ 283 (312)
T 3qsg_A 214 AEKMGLAD-RVLASLDASFPEHHLRDLALYLVERNLEHADR---RAHELGEVAATLCSVGVE--PLVAEAGYRRLT 283 (312)
T ss_dssp HHTTTCHH-HHHHHHHHHSGGGTHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHTTCC--CHHHHHHHHHHH
T ss_pred HHHcCCCH-HHHHHHHhcCCchhHHHhhhHhhcCCCCcccc---hHHHHHHHHHHHHHcCCC--cHHHHHHHHHHH
Confidence 99999999 7888887543 1 0111222 234443 489999999999999998 677776665443
No 23
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.94 E-value=7.2e-26 Score=225.25 Aligned_cols=246 Identities=11% Similarity=0.073 Sum_probs=186.6
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+|||+|||+|.||.++|.+|+++ |++|++||+++++++.+.+. +++.++++++++++||
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~~~~~-------------------g~~~~~~~~e~~~~aD 67 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQ--GKRVAIWNRSPGKAAALVAA-------------------GAHLCESVKAALSASP 67 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHH-------------------TCEECSSHHHHHHHSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHC-------------------CCeecCCHHHHHhcCC
Confidence 37899999999999999999998 99999999999999887641 2466788899899999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHH--HHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCcc
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAAR--VIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEF 158 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~--~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
+||+|||++. .+++++. .+.. +.++++||++||+.|.+++.+.+.+.+.+ . .++.+|..
T Consensus 68 vVi~~vp~~~--------------~~~~v~~~~~l~~-~~~g~ivid~st~~~~~~~~l~~~~~~~g--~--~~vdapv~ 128 (306)
T 3l6d_A 68 ATIFVLLDNH--------------ATHEVLGMPGVAR-ALAHRTIVDYTTNAQDEGLALQGLVNQAG--G--HYVKGMIV 128 (306)
T ss_dssp EEEECCSSHH--------------HHHHHHTSTTHHH-HTTTCEEEECCCCCTTHHHHHHHHHHHTT--C--EEEEEEEE
T ss_pred EEEEEeCCHH--------------HHHHHhcccchhh-ccCCCEEEECCCCCHHHHHHHHHHHHHcC--C--eEEecccc
Confidence 9999998642 2455554 5544 46799999999999999999888777653 2 33455655
Q ss_pred ccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEe--CC-chhHHHhhhhHhHHHHHHHHHHHHHHH
Q 011641 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILT--TN-LWSAELSKLAANAFLAQRISSVNAMSA 235 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~--~~-~~~ae~~Kl~~N~~~~~~ia~~nE~~~ 235 (480)
..+..+-.. ...+++|++ ++++++++++|+.++. ..++. ++ ++.++++| .+.+.++++++|...
T Consensus 129 g~~~~~~~~---~~~i~~gg~-----~~~~~~~~~ll~~lg~-~~~~~~~g~~~g~g~~~k----~~~~~~~~~~~Ea~~ 195 (306)
T 3l6d_A 129 AYPRNVGHR---ESHSIHTGD-----REAFEQHRALLEGLAG-HTVFLPWDEALAFATVLH----AHAFAAMVTFFEAVG 195 (306)
T ss_dssp SCGGGTTCT---TCEEEEEEC-----HHHHHHHHHHHHTTCS-EEEECCHHHHHHHHHHHH----HHHHHHHHHHHHHHH
T ss_pred cCcccccCC---ceEEEEcCC-----HHHHHHHHHHHHHhcC-CEEEecCCCCccHHHHHH----HHHHHHHHHHHHHHH
Confidence 433211111 124778885 7899999999999853 34555 43 78899999 455678999999999
Q ss_pred HHHHhCCCHHHHHHHhcCCC--CC-------CCCCc--cCCC-CccccchhHhHHHHHHHHHHCCCChhhHHHHHHHH
Q 011641 236 LCEATGANVSQVAFAVGTDS--RI-------GPKFL--NASV-GFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIK 301 (480)
Q Consensus 236 l~~~~Gid~~~v~~~~~~~~--~~-------~~~~~--~pg~-g~gG~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~ 301 (480)
+|+++|+|++++.++++... .. ++.++ .+.+ +|...|+.||+.++++.+++.|++ .++.+.+.+
T Consensus 196 la~~~Gld~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~KDl~~~~~~a~~~g~~--~p~~~~~~~ 271 (306)
T 3l6d_A 196 AGDRFGLPVSKTARLLLETSRFFVADALEEAVRRLETQDFKGDQARLDVHADAFAHIAQSLHAQGVW--TPVFDAVCQ 271 (306)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCTTSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHHHHhhhhcccHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHcCCC--chHHHHHHH
Confidence 99999999999999987642 11 11122 1233 368899999999999999999998 566666554
No 24
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.94 E-value=6.9e-25 Score=222.16 Aligned_cols=246 Identities=15% Similarity=0.180 Sum_probs=194.5
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccC--
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA-- 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a-- 79 (480)
|||+|||+|.||.+||.+|+++ |++|++||+++++++.+.+. ++..+++++++++.+
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~--G~~V~v~dr~~~~~~~l~~~-------------------g~~~~~s~~e~~~~a~~ 81 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKG--GHECVVYDLNVNAVQALERE-------------------GIAGARSIEEFCAKLVK 81 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTT-------------------TCBCCSSHHHHHHHSCS
T ss_pred CEEEEECchHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHC-------------------CCEEeCCHHHHHhcCCC
Confidence 7999999999999999999998 99999999999999988763 244567888888888
Q ss_pred -cEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCcc
Q 011641 80 -DIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEF 158 (480)
Q Consensus 80 -DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
|+||+|||++ .++++++++.+.++++++||+.||+.|.+++++.+.+.+.+ +.++.+|..
T Consensus 82 ~DvVi~~vp~~---------------~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g----~~~vdapVs 142 (358)
T 4e21_A 82 PRVVWLMVPAA---------------VVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQG----ITYVDVGTS 142 (358)
T ss_dssp SCEEEECSCGG---------------GHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTT----CEEEEEEEE
T ss_pred CCEEEEeCCHH---------------HHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCC----CEEEeCCCC
Confidence 9999999854 25778899999999999999999999999998887776653 233456665
Q ss_pred ccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCC-------------------CCeEEeCCchhHHHhhhhH
Q 011641 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVP-------------------EDRILTTNLWSAELSKLAA 219 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~-------------------~~~v~~~~~~~ae~~Kl~~ 219 (480)
..+..+..+ + .+++|++ ++++++++++|+.++. ...+++++.++++++|+++
T Consensus 143 Gg~~~a~~G---~-~im~GG~-----~~a~~~~~~ll~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~g~~~Kl~~ 213 (358)
T 4e21_A 143 GGIFGLERG---Y-CLMIGGE-----KQAVERLDPVFRTLAPGIGAAPRTPGREKREGTAELGYLHCGPSGAGHFVKMVH 213 (358)
T ss_dssp CGGGHHHHC---C-EEEEESC-----HHHHHHTHHHHHHHSCCGGGSCCCTTGGGCCSSGGGTEEEEESTTHHHHHHHHH
T ss_pred CCHHHHhcC---C-eeeecCC-----HHHHHHHHHHHHHhccccccCcccccccccccccccceEEECCccHHHHHHHHH
Confidence 554333332 2 5888986 7899999999999872 1356677899999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHh------------------------CCCHHHHHHHhcCCCCCCCCCc---------cCCC
Q 011641 220 NAFLAQRISSVNAMSALCEAT------------------------GANVSQVAFAVGTDSRIGPKFL---------NASV 266 (480)
Q Consensus 220 N~~~~~~ia~~nE~~~l~~~~------------------------Gid~~~v~~~~~~~~~~~~~~~---------~pg~ 266 (480)
|.+.+.++++++|...++++. |+|..++.+.++.++.+++.++ .|+.
T Consensus 214 n~l~~~~i~~~aE~~~la~~a~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~~~~~~g~~~~s~~l~~~~~~~~~~p~~ 293 (358)
T 4e21_A 214 NGIEYGLMAAYAEGLNILHHANAGKEGQGADAETAPLRNPDFYRYDLDLADITEVWRRGSVISSWLLDLSATALLDSPDL 293 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCC--------------CGGGCCCCCCHHHHHHHHTTTSTTCBHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccccccccccccchhcccCCCHHHHHHHHhCccHHHHHHHHHHHHHHhhCCCh
Confidence 999999999999999999998 8999999999998764433222 2433
Q ss_pred -CccccchhHhH---HHHHHHHHHCCCChhhHHHHHHH
Q 011641 267 -GFGGSCFQKDI---LNLVYICECNGLPEVAEYWKQVI 300 (480)
Q Consensus 267 -g~gG~cl~kD~---~~l~~~a~~~g~~~~~~~~~~~~ 300 (480)
.|.+. .||. +..+..|.+.|+| .+++.+++
T Consensus 294 ~~~~~~--~~d~g~~r~~~~~A~~~gvp--~p~~~~al 327 (358)
T 4e21_A 294 QEFQGR--VSDSGEGRWTVAAAIDEGVP--AHVLSSAL 327 (358)
T ss_dssp TTC--C--CCCCSHHHHHHHHHHHHTCC--CHHHHHHH
T ss_pred HHHHHH--HHhcCcHHHHHHHHHHcCCC--hHHHHHHH
Confidence 13322 3444 5678889999999 66666554
No 25
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.93 E-value=9.6e-25 Score=215.99 Aligned_cols=249 Identities=18% Similarity=0.226 Sum_probs=194.3
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|.||..+|..|+++ |++|++||+++++++.+.+. +++.+++++++++++|+
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~-------------------g~~~~~~~~~~~~~~D~ 64 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA--GYSLVVSDRNPEAIADVIAA-------------------GAETASTAKAIAEQCDV 64 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT-------------------TCEECSSHHHHHHHCSE
T ss_pred ceEEEECchHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHC-------------------CCeecCCHHHHHhCCCE
Confidence 6999999999999999999998 89999999999998887752 24567788888899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHH---HHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCcc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAA---RVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEF 158 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~---~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
||+|+|++. .++.++ +++.+.++++++|++.|+..+.+.+.+.+.+.+.+ +.++.+|..
T Consensus 65 vi~~v~~~~--------------~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g----~~~~~~pv~ 126 (299)
T 1vpd_A 65 IITMLPNSP--------------HVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKG----VEMLDAPVS 126 (299)
T ss_dssp EEECCSSHH--------------HHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTT----CEEEECCEE
T ss_pred EEEECCCHH--------------HHHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcC----CeEEEecCC
Confidence 999998642 345566 67778889999999999998888888888776642 234456765
Q ss_pred ccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHHHHHHHHHHHHHHHHH
Q 011641 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCE 238 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~ 238 (480)
..+..+... ...+++|+. ++..+.++++|+.++. ..++.++.+.+.+.|+++|.+.++.+++++|+..+++
T Consensus 127 ~~~~~~~~~---~~~~~~~~~-----~~~~~~~~~ll~~~g~-~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~ 197 (299)
T 1vpd_A 127 GGEPKAIDG---TLSVMVGGD-----KAIFDKYYDLMKAMAG-SVVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLAT 197 (299)
T ss_dssp SHHHHHHHT---CEEEEEESC-----HHHHHHHHHHHHTTEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHhHHhcC---CEEEEeCCC-----HHHHHHHHHHHHHHcC-CeEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443322221 124666763 7789999999999862 3455568899999999999999999999999999999
Q ss_pred HhCCCHHHHHHHhcCCCCC-------CCCCc--cCCCCccccchhHhHHHHHHHHHHCCCChhhHHHHHHH
Q 011641 239 ATGANVSQVAFAVGTDSRI-------GPKFL--NASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVI 300 (480)
Q Consensus 239 ~~Gid~~~v~~~~~~~~~~-------~~~~~--~pg~g~gG~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~ 300 (480)
+.|+|.+++.+++.....- .+.++ ...+|+...++.||...+.+.+++.|++ .++.+.+.
T Consensus 198 ~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~--~p~~~~~~ 266 (299)
T 1vpd_A 198 KAGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQ--LPLTAAVM 266 (299)
T ss_dssp HTTCCHHHHHHHHTTSTTCCHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHHTCC--CHHHHHHH
T ss_pred HcCCCHHHHHHHHHccCCCCHHHHHhhhHhhcCCCCCCCChHHHHHHHHHHHHHHHHcCCC--ChHHHHHH
Confidence 9999999999998765311 11112 1246788899999999999999999998 56555544
No 26
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.93 E-value=6.7e-25 Score=216.60 Aligned_cols=252 Identities=18% Similarity=0.156 Sum_probs=193.9
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||+|||+|.||..+|..|++. |++|++|| ++++++.+.+. ++..+++++++++++|
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~-~~~~~~~~~~~-------------------g~~~~~~~~~~~~~~D 60 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARA--GHQLHVTT-IGPVADELLSL-------------------GAVNVETARQVTEFAD 60 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHT--TCEEEECC-SSCCCHHHHTT-------------------TCBCCSSHHHHHHTCS
T ss_pred CCEEEEEccCHHHHHHHHHHHhC--CCEEEEEc-CHHHHHHHHHc-------------------CCcccCCHHHHHhcCC
Confidence 68999999999999999999998 99999999 98888777652 1334567888889999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHH---HHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCc
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAAR---VIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~---~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
+||+|+|++. .++.++. ++.+.++++++|+..|+..+++.+.+.+.+.+.+ +.++.+|.
T Consensus 61 ~vi~~vp~~~--------------~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g----~~~~~~p~ 122 (295)
T 1yb4_A 61 IIFIMVPDTP--------------QVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEMG----ADYLDAPV 122 (295)
T ss_dssp EEEECCSSHH--------------HHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTTT----EEEEECCE
T ss_pred EEEEECCCHH--------------HHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcC----CeEEEccC
Confidence 9999998642 2455565 6777788899999999988888888887776532 34456776
Q ss_pred cccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHHHHHHHHHHHHHHHH
Q 011641 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
...+..+..+ ...+++|+. ++..+.++++|+.++. ..++.++.+.+.+.|++.|.+..+.+++++|+..++
T Consensus 123 ~~~~~~a~~g---~~~~~~~~~-----~~~~~~~~~ll~~~g~-~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~E~~~l~ 193 (295)
T 1yb4_A 123 SGGEIGAREG---TLSIMVGGE-----QKVFDRVKPLFDILGK-NITLVGGNGDGQTCKVANQIIVALNIEAVSEALVFA 193 (295)
T ss_dssp ESHHHHHHHT---CEEEEEESC-----HHHHHHHHHHHHHHEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHcC---CeEEEECCC-----HHHHHHHHHHHHHhcC-CEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6544322221 113567763 7788999999999862 345566889999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCCC-------CCc--cCCCCccccchhHhHHHHHHHHHHCCCChhhHHHHHHHHHh
Q 011641 238 EATGANVSQVAFAVGTDSRIGP-------KFL--NASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKIN 303 (480)
Q Consensus 238 ~~~Gid~~~v~~~~~~~~~~~~-------~~~--~pg~g~gG~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N 303 (480)
++.|+|.+++.+.+.....-.+ .++ ...+|+...++.||+.++++.+++.|++ .++.+.+.+..
T Consensus 194 ~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~~~~~~~kd~~~~~~~a~~~g~~--~p~~~~~~~~~ 266 (295)
T 1yb4_A 194 SKAGADPVRVRQALMGGFASSRILEVHGERMINRTFEPGFKIALHQKDLNLALQSAKALALN--LPNTATCQELF 266 (295)
T ss_dssp HHTTCCHHHHHHHHTSSSSCBHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHcCCCCCHHHHHhhHHHhcCCCCCCCchHHHHHHHHHHHHHHHHcCCC--ChHHHHHHHHH
Confidence 9999999999999986541111 111 2346788899999999999999999998 56666655443
No 27
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.92 E-value=4.6e-24 Score=210.80 Aligned_cols=249 Identities=15% Similarity=0.159 Sum_probs=188.4
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|.||.++|..|+++ |++|++||+++++++.+.+. +++.+++++++++++|+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~-------------------g~~~~~~~~~~~~~~Dv 59 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKH--GYPLIIYDVFPDACKEFQDA-------------------GEQVVSSPADVAEKADR 59 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHT--TCCEEEECSSTHHHHHHHTT-------------------TCEECSSHHHHHHHCSE
T ss_pred CeEEEEeccHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc-------------------CCeecCCHHHHHhcCCE
Confidence 7999999999999999999998 89999999999999888752 25667788888899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHH---HHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCcc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARV---IADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEF 158 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~---i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
||+|||.+. .++.++.+ +.+.++++++|+..|++++.+.+.+.+.+.+.+ . .+..+|..
T Consensus 60 vi~~vp~~~--------------~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~g--~--~~~~~p~~ 121 (296)
T 2gf2_A 60 IITMLPTSI--------------NAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMG--A--VFMDAPVS 121 (296)
T ss_dssp EEECCSSHH--------------HHHHHHHSTTSGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTT--C--EEEECCEE
T ss_pred EEEeCCCHH--------------HHHHHHhCchhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHHcC--C--EEEEcCCC
Confidence 999998642 23555554 345678899999889999988888777776532 2 23456765
Q ss_pred ccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHHHHHHHHHHHHHHHHH
Q 011641 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCE 238 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~ 238 (480)
..+..+... ...+++|+. ++..+.++++|+.++. ..+.....+.+.+.|+++|.+.++.+++++|+..+++
T Consensus 122 ~g~~~a~~~---~~~~~~~~~-----~~~~~~v~~l~~~~g~-~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~~~~ 192 (296)
T 2gf2_A 122 GGVGAARSG---NLTFMVGGV-----EDEFAAAQELLGCMGS-NVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGI 192 (296)
T ss_dssp SHHHHHHHT---CEEEEEESC-----GGGHHHHHHHHTTTEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhHHhcC---cEEEEeCCC-----HHHHHHHHHHHHHHcC-CeEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443211111 113566754 6678899999998863 3445566788999999999999999999999999999
Q ss_pred HhCCCHHHHHHHhcCCCCCC---------CCCc-------cCCCCccccchhHhHHHHHHHHHHCCCChhhHHHHHHH
Q 011641 239 ATGANVSQVAFAVGTDSRIG---------PKFL-------NASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVI 300 (480)
Q Consensus 239 ~~Gid~~~v~~~~~~~~~~~---------~~~~-------~pg~g~gG~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~ 300 (480)
+.|+|.+++.+++......+ +..+ ...+||...++.||..++.+.+++.|++ .++.+.+.
T Consensus 193 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~--~p~~~~~~ 268 (296)
T 2gf2_A 193 RLGLDPKLLAKILNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGTTLMAKDLGLAQDSATSTKSP--ILLGSLAH 268 (296)
T ss_dssp HTTCCHHHHHHHHHTSTTCBHHHHHSCSSTTTCSSSGGGGTTCSSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHH
T ss_pred HcCCCHHHHHHHHHhCcccCHHHHhcCCcccccccchhccCCCCCCchHHHHHHHHHHHHHHHHcCCC--ChHHHHHH
Confidence 99999999999887632100 1111 1235788999999999999999999998 56555444
No 28
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.92 E-value=2.2e-23 Score=206.45 Aligned_cols=251 Identities=16% Similarity=0.185 Sum_probs=193.7
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+|||+|||+|.||..+|..|++. |++|++||+++++.+.+.+. ++..+++++++++++|
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~-------------------g~~~~~~~~~~~~~~D 62 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKE--GVTVYAFDLMEANVAAVVAQ-------------------GAQACENNQKVAAASD 62 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHT--TCEEEEECSSHHHHHHHHTT-------------------TCEECSSHHHHHHHCS
T ss_pred CCEEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHC-------------------CCeecCCHHHHHhCCC
Confidence 37999999999999999999998 89999999999999887752 2456678888888999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHH---HHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCc
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAAR---VIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~---~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
+||+|+|.+. .++.++. ++.+.++++++|+..|+..+++.+.+.+.+.+.+ +.++.+|.
T Consensus 63 ~vi~~vp~~~--------------~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g----~~~~~~p~ 124 (301)
T 3cky_A 63 IIFTSLPNAG--------------IVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKG----IDYVDAPV 124 (301)
T ss_dssp EEEECCSSHH--------------HHHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTT----CEEEECCE
T ss_pred EEEEECCCHH--------------HHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcC----CeEEEccC
Confidence 9999998642 3455664 7778889999999988888888888887776642 23346776
Q ss_pred cccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHHHHHHHHHHHHHHHH
Q 011641 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
...+..+..+ ...+++|+. ++..+.++++|+.++. ..++.++.+.+.+.|++.|.+..+.+++++|+..++
T Consensus 125 ~~~~~~a~~g---~~~~~~~g~-----~~~~~~v~~ll~~~g~-~~~~~~~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~ 195 (301)
T 3cky_A 125 SGGTKGAEAG---TLTIMVGAS-----EAVFEKIQPVLSVIGK-DIYHVGDTGAGDAVKIVNNLLLGCNMASLAEALVLG 195 (301)
T ss_dssp ESHHHHHHHT---CEEEEEESC-----HHHHHHHHHHHHHHEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHcC---CeEEEECCC-----HHHHHHHHHHHHHhcC-CEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5443211111 113566763 7788999999999862 344566789999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCC-------CCC-CCc--cCCCCccccchhHhHHHHHHHHHHCCCChhhHHHHHHHH
Q 011641 238 EATGANVSQVAFAVGTDSR-------IGP-KFL--NASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIK 301 (480)
Q Consensus 238 ~~~Gid~~~v~~~~~~~~~-------~~~-~~~--~pg~g~gG~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~ 301 (480)
++.|+|.+++.+.+..... ..+ .++ ...+|+...++.||...+.+.+++.|++ .++.+.+.+
T Consensus 196 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~--~p~~~~~~~ 267 (301)
T 3cky_A 196 VKCGLKPETMQEIIGKSSGRSYAMEAKMEKFIMSGDFAGGFAMDLQHKDLGLALEAGKEGNVP--LPMTAMATQ 267 (301)
T ss_dssp HHTTCCHHHHHHHHHTSTTCBHHHHHHCCCCCCTCCCSSSSBHHHHHHHHHHHHHHHHHHTCC--CHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHcCCCCCHHHHHhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHhCCC--ChHHHHHHH
Confidence 9999999999998875421 112 232 2345778899999999999999999998 566555443
No 29
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.91 E-value=9.1e-24 Score=213.98 Aligned_cols=280 Identities=14% Similarity=0.131 Sum_probs=200.6
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHc-CCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccC
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS-DQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~-~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
+|||+|||+|+||+++|..|+++ |++|++||+++++++.+++ +.++.+.|+.. ...++++++|++++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~--G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~------l~~~i~~t~d~~ea~~~a 100 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK--GQKVRLWSYESDHVDEMQAEGVNNRYLPNYP------FPETLKAYCDLKASLEGV 100 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT--TCCEEEECSCHHHHHHHHHHSSBTTTBTTCC------CCTTEEEESCHHHHHTTC
T ss_pred CCeEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHcCCCcccCCCCc------cCCCeEEECCHHHHHhcC
Confidence 37999999999999999999998 9999999999999999986 44555555542 134689999999889999
Q ss_pred cEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecC-CCcchHHHHHHHHHhcCCCCceEEeeCCcc
Q 011641 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST-VPVKTAEAIEKILTHNSKGIKFQILSNPEF 158 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST-v~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
|+||+|||+ ..++++++++.+.++++++|+..++ +.+++ +.+.+.+++..++..+.+.++|++
T Consensus 101 DvVilaVp~---------------~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t-~~~se~i~~~l~~~~~~vlsgP~~ 164 (356)
T 3k96_A 101 TDILIVVPS---------------FAFHEVITRMKPLIDAKTRIAWGTKGLAKGS-RLLHEVVATELGQVPMAVISGPSL 164 (356)
T ss_dssp CEEEECCCH---------------HHHHHHHHHHGGGCCTTCEEEECCCSCBTTT-BCHHHHHHHHHCSCCEEEEESSCC
T ss_pred CEEEECCCH---------------HHHHHHHHHHHHhcCCCCEEEEEeCCCCcCc-cCHHHHHHHHcCCCCEEEEECccH
Confidence 999999985 2478899999999999998877654 67777 656666655432235678899998
Q ss_pred ccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHh-----------------hhhHhH
Q 011641 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELS-----------------KLAANA 221 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~-----------------Kl~~N~ 221 (480)
..+... ..|..+++++. +++..+.++++|+..+ ...+...|+..+||. |+..|+
T Consensus 165 a~ev~~----g~pt~~via~~----~~~~~~~v~~lf~~~~-~rv~~~~Di~g~e~~galkNviaia~G~~~gl~~g~N~ 235 (356)
T 3k96_A 165 ATEVAA----NLPTAVSLASN----NSQFSKDLIERLHGQR-FRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNA 235 (356)
T ss_dssp HHHHHT----TCCEEEEEEES----CHHHHHHHHHHHCCSS-EEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred HHHHHc----CCCeEEEEecC----CHHHHHHHHHHhCCCC-eeEEEeCCHHHHHHHHHHHHHHHHHHHHHhhccCCchH
Confidence 776432 34556777876 4788999999999754 234556788888875 677788
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCC-------CCCCCCCc---cCCCCccc----------cchhHhHHHHH
Q 011641 222 FLAQRISSVNAMSALCEATGANVSQVAFAVGTD-------SRIGPKFL---NASVGFGG----------SCFQKDILNLV 281 (480)
Q Consensus 222 ~~~~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~-------~~~~~~~~---~pg~g~gG----------~cl~kD~~~l~ 281 (480)
..++.+.+++|+.++|+++|+|++++.+..+.. +..+.++- .-|-|..- --=.++...+.
T Consensus 236 ~aal~~~~l~E~~~l~~a~G~~~~t~~gl~g~gDl~~tc~s~~sRN~~~G~~l~~g~~~~~~~~~~~~~~eG~~t~~~~~ 315 (356)
T 3k96_A 236 RAALITRGLTEMGRLVSVFGGKQETLTGLAGLGDLVLTCTDNQSRNRRFGLALGEGVDKKEAQQAIGQAIEGLYNTDQVH 315 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCHHHHTSTTTHHHHHHHHHCTTCHHHHHHHHHHHTCCHHHHHHHHCSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCChHhhcccchhhHHHHhccCCCCccHHHHHHHHCCCCHHHHHHHcCCccchHHHHHHHH
Confidence 889999999999999999999999887554321 00111110 00001000 01134567777
Q ss_pred HHHHHCCCChhhHHHHHHHHH--hHHhHHHHHHHHH
Q 011641 282 YICECNGLPEVAEYWKQVIKI--NDYQKSRFVNRVV 315 (480)
Q Consensus 282 ~~a~~~g~~~~~~~~~~~~~~--N~~~~~~~~~~~~ 315 (480)
.+++++|++ .++.+++-++ ++.-|+..++.++
T Consensus 316 ~la~~~~v~--~Pi~~~v~~il~~~~~~~~~~~~l~ 349 (356)
T 3k96_A 316 ALAQKHAIE--MPLTFQVHRILHEDLDPQQAVQELL 349 (356)
T ss_dssp HHHHHTTCC--CHHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred HHHHHcCCC--CcHHHHHHHHHhCCCCHHHHHHHHH
Confidence 788888887 5666665543 3344555555443
No 30
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.91 E-value=1.3e-23 Score=219.88 Aligned_cols=207 Identities=12% Similarity=0.152 Sum_probs=167.9
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc---
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS--- 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--- 77 (480)
||+|+|||+|.||.+||.+|+++ ||+|++||+++++++.+.+.+.. ..++..+++++++++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~g~~--------------g~~i~~~~s~~e~v~~l~ 67 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDH--GFVVCAFNRTVSKVDDFLANEAK--------------GTKVVGAQSLKEMVSKLK 67 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSTHHHHHHHHTTTT--------------TSSCEECSSHHHHHHTBC
T ss_pred CCEEEEEChhHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhcccC--------------CCceeccCCHHHHHhhcc
Confidence 58999999999999999999998 99999999999999998763210 124566788888766
Q ss_pred cCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCc
Q 011641 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPE 157 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
.+|+||+|||++ ..++++++++.+.++++++||+.||+.+.++.++.+.+.+.+ +.++.+|.
T Consensus 68 ~aDvVil~Vp~~--------------~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~G----i~fvd~pV 129 (484)
T 4gwg_A 68 KPRRIILLVKAG--------------QAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKG----ILFVGSGV 129 (484)
T ss_dssp SSCEEEECSCSS--------------HHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTT----CEEEEEEE
T ss_pred CCCEEEEecCCh--------------HHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhc----cccccCCc
Confidence 599999999964 245778899999999999999999999988888877776653 23345666
Q ss_pred cccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCe-------EEeCCchhHHHhhhhHhHHHHHHHHHH
Q 011641 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDR-------ILTTNLWSAELSKLAANAFLAQRISSV 230 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~-------v~~~~~~~ae~~Kl~~N~~~~~~ia~~ 230 (480)
...+..+..+ +.+++|++ +++.++++++|+.++. .. ++.++.++++.+|+++|.+.+.+++++
T Consensus 130 sGg~~gA~~G----~~im~GG~-----~ea~~~v~pll~~ig~-~v~~~~~~~~~~G~~Gag~~vKmv~N~i~~~~m~~i 199 (484)
T 4gwg_A 130 SGGEEGARYG----PSLMPGGN-----KEAWPHIKTIFQGIAA-KVGTGEPCCDWVGDEGAGHFVKMVHNGIEYGDMQLI 199 (484)
T ss_dssp ESHHHHHHHC----CEEEEEEC-----GGGHHHHHHHHHHHSC-BCTTSCBSBCCCEETTHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHhcC----CeeecCCC-----HHHHHHHHHHHHHhcC-cccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHH
Confidence 5544333222 26788986 6789999999998864 22 456678999999999999999999999
Q ss_pred HHHHHHHHH-hCCCHHHHHHHh
Q 011641 231 NAMSALCEA-TGANVSQVAFAV 251 (480)
Q Consensus 231 nE~~~l~~~-~Gid~~~v~~~~ 251 (480)
+|+..++++ +|+|+.++.+++
T Consensus 200 aEa~~l~~~~~Gld~~~l~~v~ 221 (484)
T 4gwg_A 200 CEAYHLMKDVLGMAQDEMAQAF 221 (484)
T ss_dssp HHHHHHHHHTSCCCHHHHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHH
Confidence 999999999 999999988876
No 31
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.91 E-value=6.9e-23 Score=204.41 Aligned_cols=249 Identities=15% Similarity=0.134 Sum_probs=188.1
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|.||..+|..|++. |++|++||+++++++.+.+. ++..+++++++++++|+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~-------------------g~~~~~~~~~~~~~~Dv 89 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM--GHTVTVWNRTAEKCDLFIQE-------------------GARLGRTPAEVVSTCDI 89 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT--TCCEEEECSSGGGGHHHHHT-------------------TCEECSCHHHHHHHCSE
T ss_pred CeEEEEcccHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHc-------------------CCEEcCCHHHHHhcCCE
Confidence 7899999999999999999998 89999999999988877642 23556778888899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHH---HhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCcc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVI---ADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEF 158 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i---~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
||+|||++. .++.++..+ .+.++++++|++.|++.+.+.+.+.+.+.+.+ ..++.+|..
T Consensus 90 Vi~av~~~~--------------~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~----~~~v~~p~~ 151 (316)
T 2uyy_A 90 TFACVSDPK--------------AAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRG----GRFLEAPVS 151 (316)
T ss_dssp EEECCSSHH--------------HHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTT----CEEEECCEE
T ss_pred EEEeCCCHH--------------HHHHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcC----CEEEEcCcc
Confidence 999998642 345555543 36788899999999988888888877775532 233455654
Q ss_pred ccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHHHHHHHHHHHHHHHHH
Q 011641 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCE 238 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~ 238 (480)
..+..+.. ....+++|++ ++..+.++++|+.++. ..++..+++.+.+.|++.|.+....+++++|+..+++
T Consensus 152 g~~~~~~~---g~~~~~~~g~-----~~~~~~v~~ll~~~g~-~~~~~~~~~~~~~~K~~~n~~~~~~~~~~~Ea~~la~ 222 (316)
T 2uyy_A 152 GNQQLSND---GMLVILAAGD-----RGLYEDCSSCFQAMGK-TSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQ 222 (316)
T ss_dssp SCHHHHHH---TCEEEEEEEC-----HHHHHHTHHHHHHHEE-EEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhHHhh---CCEEEEeCCC-----HHHHHHHHHHHHHhcC-CEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33221111 1113556764 6788999999999862 3344457899999999999999999999999999999
Q ss_pred HhCCCHHHHHHHhcCCCCCCC-------CCc--cCCCCccccchhHhHHHHHHHHHHCCCChhhHHHHHHH
Q 011641 239 ATGANVSQVAFAVGTDSRIGP-------KFL--NASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVI 300 (480)
Q Consensus 239 ~~Gid~~~v~~~~~~~~~~~~-------~~~--~pg~g~gG~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~ 300 (480)
+.|++.+++.++++....-.+ .++ ...+|+...++.||..++++.+++.|++ .++.+.+.
T Consensus 223 ~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~--~p~~~~v~ 291 (316)
T 2uyy_A 223 VTGQSQQTLLDILNQGQLASIFLDQKCQNILQGNFKPDFYLKYIQKDLRLAIALGDAVNHP--TPMAAAAN 291 (316)
T ss_dssp HTTCCHHHHHHHHHHSTTCCHHHHHHHHHHHHTCCCCSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHH
T ss_pred HcCCCHHHHHHHHHcCCCCCHHHHHhhHHhhcCCCCCCCcHHHHHHHHHHHHHHHHHhCCC--ChHHHHHH
Confidence 999999999998876531111 111 2456788899999999999999999998 56555444
No 32
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.91 E-value=4.2e-23 Score=202.98 Aligned_cols=249 Identities=15% Similarity=0.160 Sum_probs=188.2
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||+|||+|.||..+|..|++ |++|++||+++++.+.+.+. ++..++ ++++++++|
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~---g~~V~~~~~~~~~~~~~~~~-------------------g~~~~~-~~~~~~~~D 57 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR---RFPTLVWNRTFEKALRHQEE-------------------FGSEAV-PLERVAEAR 57 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT---TSCEEEECSSTHHHHHHHHH-------------------HCCEEC-CGGGGGGCS
T ss_pred CCeEEEEcccHHHHHHHHHHhC---CCeEEEEeCCHHHHHHHHHC-------------------CCcccC-HHHHHhCCC
Confidence 7899999999999999999986 68999999999998887642 112233 566788999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCcccc
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLA 160 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~ 160 (480)
+||+|+|++. .++.+++++.+.++++++|++.|+..+.+.+.+.+.+.+.+ ..++.+|....
T Consensus 58 ~vi~~v~~~~--------------~~~~v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g----~~~~~~p~~~~ 119 (289)
T 2cvz_A 58 VIFTCLPTTR--------------EVYEVAEALYPYLREGTYWVDATSGEPEASRRLAERLREKG----VTYLDAPVSGG 119 (289)
T ss_dssp EEEECCSSHH--------------HHHHHHHHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTT----EEEEECCEESH
T ss_pred EEEEeCCChH--------------HHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcC----CEEEEecCCCC
Confidence 9999998642 24667788888899999999999988888888887776532 33445675433
Q ss_pred ccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHHHHHHHHHHHHHHHHHHh
Q 011641 161 EGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEAT 240 (480)
Q Consensus 161 ~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~~~ 240 (480)
+..+.. ....+++|+. ++..+.++++| .++. ..++..+.+.+.+.|++.|.+..+.+++++|+..++++.
T Consensus 120 ~~~~~~---g~~~~~~~~~-----~~~~~~~~~ll-~~g~-~~~~~~~~~~~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~ 189 (289)
T 2cvz_A 120 TSGAEA---GTLTVMLGGP-----EEAVERVRPFL-AYAK-KVVHVGPVGAGHAVKAINNALLAVNLWAAGEGLLALVKQ 189 (289)
T ss_dssp HHHHHH---TCEEEEEESC-----HHHHHHHGGGC-TTEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHhh---CCeEEEECCC-----HHHHHHHHHHH-hhcC-CeEEcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 321111 1223556653 77889999999 8752 345667888999999999999999999999999999999
Q ss_pred CCCHHHHHHHhcCCCC-------CCC-CCc--cCCCCccccchhHhHHHHHHHHHHCCCChhhHHHHHHHHH
Q 011641 241 GANVSQVAFAVGTDSR-------IGP-KFL--NASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKI 302 (480)
Q Consensus 241 Gid~~~v~~~~~~~~~-------~~~-~~~--~pg~g~gG~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~ 302 (480)
|+|.+++.+.+..... .++ .++ ...+|+...++.||...+.+.+++.|++ .++.+.+.+.
T Consensus 190 G~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~--~p~~~~v~~~ 259 (289)
T 2cvz_A 190 GVSAEKALEVINASSGRSNATENLIPQRVLTRAFPKTFALGLLVKDLGIAMGVLDGEKAP--SPLLRLAREV 259 (289)
T ss_dssp TCCHHHHHHHHTTSTTCBHHHHHTHHHHTTTSCCCCSSBHHHHHHHHHHHHHHHTTTCCC--CHHHHHHHHH
T ss_pred CcCHHHHHHHHHccCCCCHHHHHhccchhhcCCCCCCcChHHHHHHHHHHHHHHHHcCCC--ChHHHHHHHH
Confidence 9999999999876431 111 122 2345778899999999999999999998 5666654443
No 33
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.88 E-value=9e-22 Score=207.47 Aligned_cols=251 Identities=12% Similarity=0.083 Sum_probs=186.8
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhcc---
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE--- 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~--- 78 (480)
.+|+|||+|.||.+||.+|+++ |++|++||+++++++.++++..+ + .+++.+++++++++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~--G~~V~v~dr~~~~~~~l~~~~~~----~----------~gi~~~~s~~e~v~~l~~ 74 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH--GFTVCAYNRTQSKVDHFLANEAK----G----------KSIIGATSIEDFISKLKR 74 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSHHHHHHHHTTTT----T----------SSEECCSSHHHHHHTSCS
T ss_pred CCEEEEeeHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHccccc----C----------CCeEEeCCHHHHHhcCCC
Confidence 4799999999999999999998 99999999999999998863211 0 146778889887776
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCcc
Q 011641 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEF 158 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
+|+||+|||++ ..++++++++.+.++++++||+.||..+.+++++.+.+++.+ .. ++.+|..
T Consensus 75 aDvVil~Vp~~--------------~~v~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g--~~--~v~~pVs 136 (497)
T 2p4q_A 75 PRKVMLLVKAG--------------APVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKG--IL--FVGSGVS 136 (497)
T ss_dssp SCEEEECCCSS--------------HHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTT--CE--EEEEEEE
T ss_pred CCEEEEEcCCh--------------HHHHHHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcC--Cc--eeCCCcc
Confidence 99999999964 246788899999999999999999999888888877776643 22 2344544
Q ss_pred ccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCC------eEEeCCchhHHHhhhhHhHHHHHHHHHHHH
Q 011641 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPED------RILTTNLWSAELSKLAANAFLAQRISSVNA 232 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~------~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE 232 (480)
..|..+.. .+.+++|+. +++.+.++++|+.++. . +.+.+..+.+.++|+++|.+.+..+++++|
T Consensus 137 gg~~~a~~----G~~im~gg~-----~e~~~~v~~ll~~~g~-~~dGe~~v~~vg~~G~g~~~Kl~~N~~~~~~~~~laE 206 (497)
T 2p4q_A 137 GGEEGARY----GPSLMPGGS-----EEAWPHIKNIFQSISA-KSDGEPCCEWVGPAGAGHYVKMVHNGIEYGDMQLICE 206 (497)
T ss_dssp SHHHHHHH----CCEEEEEEC-----GGGHHHHHHHHHHHSC-EETTEESCCCCEETTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cChhHhhc----CCeEEecCC-----HHHHHHHHHHHHHhcC-ccCCCCceEEECCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 44432222 124778875 6788999999999863 2 244556789999999999999999999999
Q ss_pred HHHHHHH-hCCCHHHHHHHhc---CCCCCCC-------CCc--cCCCCccccchh-----HhHH-HHHHHHHHCCCChhh
Q 011641 233 MSALCEA-TGANVSQVAFAVG---TDSRIGP-------KFL--NASVGFGGSCFQ-----KDIL-NLVYICECNGLPEVA 293 (480)
Q Consensus 233 ~~~l~~~-~Gid~~~v~~~~~---~~~~~~~-------~~~--~pg~g~gG~cl~-----kD~~-~l~~~a~~~g~~~~~ 293 (480)
+..++++ +|+|++++.+++. ...--++ .+. .+..++-...+. ||+. .....|++.|++ .
T Consensus 207 a~~l~~~~lGl~~~~~~~~~~~w~~g~~~S~l~~~~~~~l~~~d~~~~~~vd~i~D~~~~KgtG~~~~~~A~~~Gv~--~ 284 (497)
T 2p4q_A 207 AYDIMKRLGGFTDKEISDVFAKWNNGVLDSFLVEITRDILKFDDVDGKPLVEKIMDTAGQKGTGKWTAINALDLGMP--V 284 (497)
T ss_dssp HHHHHHHTTCCCHHHHHHHHHHHHTTTTCBHHHHHHHHHHTCBCTTSSBGGGGSCCCCCCCSHHHHHHHHHHHHTCC--C
T ss_pred HHHHHHHccCCCHHHHHHHHHHhcCCccccHHHHHHHHHHhcCCCCCccHHHHHHHhhccchHHHHHHHHHHHcCCC--C
Confidence 9999999 6999999998883 2211000 001 111124444444 7765 567889999998 4
Q ss_pred HHHHH
Q 011641 294 EYWKQ 298 (480)
Q Consensus 294 ~~~~~ 298 (480)
+++..
T Consensus 285 P~~~~ 289 (497)
T 2p4q_A 285 TLIGE 289 (497)
T ss_dssp HHHHH
T ss_pred chHHH
Confidence 55554
No 34
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.86 E-value=1.1e-20 Score=189.62 Aligned_cols=275 Identities=14% Similarity=0.115 Sum_probs=190.7
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEEC--CHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEec--CHHHhhc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDI--SVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFST--DVEKHVS 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~--~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~--d~~~a~~ 77 (480)
|||+|||+|.||.++|..|+++ |++|++||+ ++++++.+++....+.. +.. . .++.+++ +++++++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~-g~~------~-~~~~~~~~~~~~~~~~ 70 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDN--GNEVRIWGTEFDTEILKSISAGREHPRL-GVK------L-NGVEIFWPEQLEKCLE 70 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH--CCEEEEECCGGGHHHHHHHHTTCCBTTT-TBC------C-CSEEEECGGGHHHHHT
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCeEEEEEccCCHHHHHHHHHhCcCccc-Ccc------c-cceEEecHHhHHHHHh
Confidence 7999999999999999999998 999999999 99999999875432211 110 0 2456777 8878789
Q ss_pred cCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEec-CC---CcchHHHHHHHHHhcCCC-CceEE
Q 011641 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKS-TV---PVKTAEAIEKILTHNSKG-IKFQI 152 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~S-Tv---~~gt~~~l~~~l~~~~~g-~~~~v 152 (480)
++|+||+|||++ .+.++++++.+ ++++++|+..+ ++ ++++.+.+.+.+.+..++ ..+.+
T Consensus 71 ~~D~vi~~v~~~---------------~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~~~~~ 134 (335)
T 1txg_A 71 NAEVVLLGVSTD---------------GVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRERTVA 134 (335)
T ss_dssp TCSEEEECSCGG---------------GHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGGGEEE
T ss_pred cCCEEEEcCChH---------------HHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCCcEEE
Confidence 999999999853 24678888999 98899888776 66 778878888877653211 23455
Q ss_pred eeCCccccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHh-----------------
Q 011641 153 LSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELS----------------- 215 (480)
Q Consensus 153 ~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~----------------- 215 (480)
..+|.+...+.. ..+..+++|+. +++..+.++++|+..+. ......|+..++|.
T Consensus 135 ~~~p~~~~~~~~----g~~~~~~~~~~----~~~~~~~~~~ll~~~g~-~~~~~~di~~~~~~k~~~N~~~~~~~~~~~~ 205 (335)
T 1txg_A 135 ITGPAIAREVAK----RMPTTVVFSSP----SESSANKMKEIFETEYF-GVEVTTDIIGTEITSALKNVYSIAIAWIRGY 205 (335)
T ss_dssp EESSCCHHHHHT----TCCEEEEEECS----CHHHHHHHHHHHCBTTE-EEEEESCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCcHHHHHc----cCCcEEEEEeC----CHHHHHHHHHHhCCCcE-EEEecCchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 667765433211 12234667765 46788999999998652 34556788888886
Q ss_pred hhh-----HhHHHHHHHHHHHHHHHHHHHhCCCHHHHH------HHhcCCCCCCCCC-c--cCCCCcccc----------
Q 011641 216 KLA-----ANAFLAQRISSVNAMSALCEATGANVSQVA------FAVGTDSRIGPKF-L--NASVGFGGS---------- 271 (480)
Q Consensus 216 Kl~-----~N~~~~~~ia~~nE~~~l~~~~Gid~~~v~------~~~~~~~~~~~~~-~--~pg~g~gG~---------- 271 (480)
|+. +|.++++..+.++|+..+++++|+|+.++. +.+.+... +.++ + ..+.|+...
T Consensus 206 ~~~~l~~~~n~~~~~~~~~~~E~~~la~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~d~~~~~~~~ 284 (335)
T 1txg_A 206 ESRKNVEMSNAKGVIATRAINEMAELIEILGGDRETAFGLSGFGDLIATFRG-GRNGMLGELLGKGLSIDEAMEELERRG 284 (335)
T ss_dssp HHHHTCCCHHHHHHHHHHHHHHHHHHHHHHTSCGGGGGSTTTHHHHHHTTTC-HHHHHHHHHHHTTCCHHHHHHHHHHTT
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcchhhcccchhheeecccc-CccHHHHHHHhCCCCHHHHHHHhccCC
Confidence 555 677788899999999999999999987654 33332210 0011 0 112233211
Q ss_pred -ch---hHhHHHHHHHHHHCCCChhhHHHHHHHHHhHH--hHHHHHHHH
Q 011641 272 -CF---QKDILNLVYICECNGLPEVAEYWKQVIKINDY--QKSRFVNRV 314 (480)
Q Consensus 272 -cl---~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~--~~~~~~~~~ 314 (480)
+. .||..++.+.+++.|++ .++.+.+.++... .|+..++.+
T Consensus 285 ~~~~E~~~~~~~~~~~a~~~gv~--~P~~~~~~~~~~~~~~~~~~~~~l 331 (335)
T 1txg_A 285 VGVVEGYKTAEKAYRLSSKINAD--TKLLDSIYRVLYEGLKVEEVLFEL 331 (335)
T ss_dssp CCCCHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred ceecchHHHHHHHHHHHHHcCCC--CcHHHHHHHHHhCCCCHHHHHHHH
Confidence 33 39999999999999998 6777777665543 344444443
No 35
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.86 E-value=2.7e-20 Score=195.76 Aligned_cols=254 Identities=16% Similarity=0.113 Sum_probs=183.3
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcC-CCCCcCCChHHHHhhhcCCCEEEecCHHHhhc---
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSD-QLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS--- 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~-~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--- 77 (480)
|||+|||+|.||.++|..|+++ |++|++||+++++++.+++. ... +. ..++..+++++++++
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~--G~~V~v~dr~~~~~~~l~~~~g~~---~~---------~~~i~~~~~~~e~v~~l~ 67 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEK--GFKVAVFNRTYSKSEEFMKANASA---PF---------AGNLKAFETMEAFAASLK 67 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHTTTS---TT---------GGGEEECSCHHHHHHHBC
T ss_pred CEEEEEChHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhcCCC---CC---------CCCeEEECCHHHHHhccc
Confidence 7999999999999999999998 99999999999999988752 111 10 013677889888776
Q ss_pred cCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCc
Q 011641 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPE 157 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
.+|+||+|||++ ..++++++++.+.++++++||+.|+..+..++++.+.+++.+ .. ++.+|.
T Consensus 68 ~aDvVilaVp~~--------------~~v~~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g--~~--~v~~pv 129 (478)
T 1pgj_A 68 KPRKALILVQAG--------------AATDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAG--LR--FLGMGI 129 (478)
T ss_dssp SSCEEEECCCCS--------------HHHHHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTT--CE--EEEEEE
T ss_pred CCCEEEEecCCh--------------HHHHHHHHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCC--Ce--EEEeec
Confidence 499999999864 235778889999999999999988887777777777776532 22 223444
Q ss_pred cccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCC------eEEeCCchhHHHhhhhHhHHHHHHHHHHH
Q 011641 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPED------RILTTNLWSAELSKLAANAFLAQRISSVN 231 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~------~v~~~~~~~ae~~Kl~~N~~~~~~ia~~n 231 (480)
...+..+.. .+.+++|+. ++..+.++++|+.++... ..+.++.+.+.++|+++|.+.+..+++++
T Consensus 130 ~gg~~~a~~----g~~i~~gg~-----~~~~~~v~~ll~~~g~~~~dg~~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~i~ 200 (478)
T 1pgj_A 130 SGGEEGARK----GPAFFPGGT-----LSVWEEIRPIVEAAAAKADDGRPCVTMNGSGGAGSCVKMYHNSGEYAILQIWG 200 (478)
T ss_dssp ESHHHHHHH----CCEEEEEEC-----HHHHHHHHHHHHHHSCBCTTSCBSCCCCCSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHhc----CCeEeccCC-----HHHHHHHHHHHHHhcccccCCCeeEEEeCCchHHHHHhhHHHHHHHHHHHHHH
Confidence 332221111 124677874 778999999999886320 34556778899999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHhc----CCCC------CCCCCc-cCC-CC-ccccchh-----HhH-HHHHHHHHHCCCChh
Q 011641 232 AMSALCEATGANVSQVAFAVG----TDSR------IGPKFL-NAS-VG-FGGSCFQ-----KDI-LNLVYICECNGLPEV 292 (480)
Q Consensus 232 E~~~l~~~~Gid~~~v~~~~~----~~~~------~~~~~~-~pg-~g-~gG~cl~-----kD~-~~l~~~a~~~g~~~~ 292 (480)
|+..+++++|++.+++.+++. .... +....+ .-. .| +-...+. ||+ ..+...|+++|++
T Consensus 201 Ea~~l~~~~G~~~~~~~~l~~~w~~~g~~~s~l~~~~~~~l~~~d~~G~~~ld~i~D~~~~kgtg~~~~~~A~~~Gv~-- 278 (478)
T 1pgj_A 201 EVFDILRAMGLNNDEVAAVLEDWKSKNFLKSYMLDISIAAARAKDKDGSYLTEHVMDRIGSKGTGLWSAQEALEIGVP-- 278 (478)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHTSTTCBHHHHHHHHHHHCBCTTSSBGGGGBCCCCCCCSHHHHHHHHHHHHTCC--
T ss_pred HHHHHHHHcCCCHHHHHHHHHHhccCCCcCchHHHhhchhhhcCCCCChhHHHHHHHHhcCccHHHHHHHHHHHhCCC--
Confidence 999999999999999988885 2211 000111 111 12 2222222 444 5888999999999
Q ss_pred hHHHHH
Q 011641 293 AEYWKQ 298 (480)
Q Consensus 293 ~~~~~~ 298 (480)
.+++++
T Consensus 279 ~Pi~~~ 284 (478)
T 1pgj_A 279 APSLNM 284 (478)
T ss_dssp CHHHHH
T ss_pred ChHHHH
Confidence 666665
No 36
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.86 E-value=1.2e-20 Score=198.81 Aligned_cols=249 Identities=12% Similarity=0.111 Sum_probs=181.5
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc---c
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS---E 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~---~ 78 (480)
|||+|||+|.||.++|.+|+++ |++|++||+++++++.++++..+ + .++..+++++++++ +
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~--G~~V~v~dr~~~~~~~l~~~~~~----g----------~gi~~~~~~~e~v~~l~~ 66 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH--GFVVCAFNRTVSKVDDFLANEAK----G----------TKVLGAHSLEEMVSKLKK 66 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSTHHHHHHHHTTTT----T----------SSCEECSSHHHHHHHBCS
T ss_pred CeEEEEChHHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHhcccc----C----------CCeEEeCCHHHHHhhccC
Confidence 7899999999999999999998 99999999999999998863211 1 13677888888764 8
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCcc
Q 011641 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEF 158 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
+|+||+|||++ ..++++++++.+.++++++||+.|+..+..++++.+.+++.+ . .++.+|..
T Consensus 67 aDvVilaVp~~--------------~~v~~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g--~--~~v~~pv~ 128 (482)
T 2pgd_A 67 PRRIILLVKAG--------------QAVDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKG--I--LFVGSGVS 128 (482)
T ss_dssp SCEEEECSCTT--------------HHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTT--C--EEEEEEEE
T ss_pred CCEEEEeCCCh--------------HHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcC--C--eEeCCCCC
Confidence 99999999964 245778889999999999999988888777777777776542 2 23345554
Q ss_pred ccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCe-------EEeCCchhHHHhhhhHhHHHHHHHHHHH
Q 011641 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDR-------ILTTNLWSAELSKLAANAFLAQRISSVN 231 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~-------v~~~~~~~ae~~Kl~~N~~~~~~ia~~n 231 (480)
..+..+. .++.+++|+. ++..+.++++|+.++. .. .+.+..+.+.++|+++|.+.+..+++++
T Consensus 129 g~~~~a~----~g~~i~~gg~-----~e~~~~v~~ll~~~g~-~v~d~~~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~i~ 198 (482)
T 2pgd_A 129 GGEDGAR----YGPSLMPGGN-----KEAWPHIKAIFQGIAA-KVGTGEPCCDWVGDDGAGHFVKMVHNGIEYGDMQLIC 198 (482)
T ss_dssp SHHHHHH----HCCEEEEEEC-----TTTHHHHHHHHHHHSC-BCTTSCBSCCCCEETTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhhhc----cCCeEEeCCC-----HHHHHHHHHHHHHhhh-hccCCCcceEEECCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 3332221 2225677875 5678899999998763 22 3445678899999999999999999999
Q ss_pred HHHHHHHHh-CCCHHHHHHHhc---CCCCCCCC-------Ccc---CCCCccccch------hHhHHHHHHHHHHCCCCh
Q 011641 232 AMSALCEAT-GANVSQVAFAVG---TDSRIGPK-------FLN---ASVGFGGSCF------QKDILNLVYICECNGLPE 291 (480)
Q Consensus 232 E~~~l~~~~-Gid~~~v~~~~~---~~~~~~~~-------~~~---pg~g~gG~cl------~kD~~~l~~~a~~~g~~~ 291 (480)
|+..++++. |++.+++.+++. ... .++. .+. ++.++-..-+ .+|...+...|+++|++
T Consensus 199 Ea~~l~~~~~G~~~~~~~~~~~~w~~g~-~~S~l~~~~~~~l~~~d~~~~~~ld~i~d~~~~k~t~~~~~~~A~~~Gv~- 276 (482)
T 2pgd_A 199 EAYHLMKDVLGLGHKEMAKAFEEWNKTE-LDSFLIEITASILKFQDADGKHLLPKIRDSAGQKGTGKWTAISALEYGVP- 276 (482)
T ss_dssp HHHHHHHHTSCCCHHHHHHHHHHHTTTT-TCBHHHHHHHHHHHCBCTTSSBSGGGSCCCCCCCSHHHHHHHHHHHHTCC-
T ss_pred HHHHHHHhcCCcCHHHHHHHHHHhcCCC-cCchHHHHHhHHhhccCCCCCeeecccccccccccHHHHHHHHHHHcCCC-
Confidence 999999999 999999998884 221 1110 011 1112221212 24456788899999998
Q ss_pred hhHHHH
Q 011641 292 VAEYWK 297 (480)
Q Consensus 292 ~~~~~~ 297 (480)
.+++.
T Consensus 277 -~P~i~ 281 (482)
T 2pgd_A 277 -VTLIG 281 (482)
T ss_dssp -CHHHH
T ss_pred -cchHH
Confidence 55553
No 37
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.86 E-value=9.3e-21 Score=199.13 Aligned_cols=206 Identities=12% Similarity=0.148 Sum_probs=165.2
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhcc---
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE--- 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~--- 78 (480)
|+|+|||+|.||.+||.+|+++ |++|++||+++++++.+++... + .+++.+++++++++.
T Consensus 16 ~~IgvIGlG~MG~~lA~~La~~--G~~V~v~~r~~~~~~~l~~~~~-----~----------~gi~~~~s~~e~v~~l~~ 78 (480)
T 2zyd_A 16 QQIGVVGMAVMGRNLALNIESR--GYTVSIFNRSREKTEEVIAENP-----G----------KKLVPYYTVKEFVESLET 78 (480)
T ss_dssp BSEEEECCSHHHHHHHHHHHTT--TCCEEEECSSHHHHHHHHHHST-----T----------SCEEECSSHHHHHHTBCS
T ss_pred CeEEEEccHHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHhhCC-----C----------CCeEEeCCHHHHHhCCCC
Confidence 6799999999999999999998 9999999999999998875210 0 147788899888776
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCcc
Q 011641 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEF 158 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
+|+||+|||++. .++++++++.+.++++++||+.|+..+.+++++.+.+++.+ . .++.+|..
T Consensus 79 aDvVil~Vp~~~--------------~v~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g--~--~~v~~pv~ 140 (480)
T 2zyd_A 79 PRRILLMVKAGA--------------GTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEG--F--NFIGTGVS 140 (480)
T ss_dssp SCEEEECSCSSS--------------HHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTT--C--EEEEEEEE
T ss_pred CCEEEEECCCHH--------------HHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCC--C--CeeCCccc
Confidence 999999999642 35778899999999999999999998888888877776643 2 22345654
Q ss_pred ccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCC------eEEeCCchhHHHhhhhHhHHHHHHHHHHHH
Q 011641 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPED------RILTTNLWSAELSKLAANAFLAQRISSVNA 232 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~------~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE 232 (480)
..|..+.. .+ .+++|+. ++..+.++++|+.++... +.+.+..+.+.++|++.|.+.+..+..++|
T Consensus 141 gg~~~a~~---g~-~i~~gg~-----~~~~~~v~~ll~~~g~~~~dGe~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~laE 211 (480)
T 2zyd_A 141 GGEEGALK---GP-SIMPGGQ-----KEAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAE 211 (480)
T ss_dssp SHHHHHHH---CC-EEEEESC-----HHHHHHHHHHHHHHSCBCTTSCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCHhHHhc---CC-eEEecCC-----HHHHHHHHHHHHHHhccccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 44433322 12 4778875 788999999999986420 345567899999999999999999999999
Q ss_pred HHHHHHH-hCCCHHHHHHHh
Q 011641 233 MSALCEA-TGANVSQVAFAV 251 (480)
Q Consensus 233 ~~~l~~~-~Gid~~~v~~~~ 251 (480)
+..++++ +|+|++++.+++
T Consensus 212 a~~l~~~~lGl~~~~~~~l~ 231 (480)
T 2zyd_A 212 AYSLLKGGLNLTNEELAQTF 231 (480)
T ss_dssp HHHHHHHHHCCCHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHHHH
Confidence 9999999 799999999887
No 38
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.86 E-value=1.4e-21 Score=198.94 Aligned_cols=279 Identities=18% Similarity=0.170 Sum_probs=189.8
Q ss_pred EEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCC-CCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 3 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQ-LPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 3 kI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~-~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
||+|||+|.||.++|..|+++ ||+|++||+++++++.+++.. ...+.++.. ...+++++++++++++++|+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~--G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~aDv 88 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK--CREVCVWHMNEEEVRLVNEKRENVLFLKGVQ------LASNITFTSDVEKAYNGAEI 88 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT--EEEEEEECSCHHHHHHHHHHTBCTTTSTTCB------CCTTEEEESCHHHHHTTCSS
T ss_pred eEEEECCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHcCcccccccccc------cccceeeeCCHHHHHcCCCE
Confidence 999999999999999999998 999999999999999987632 222323321 11357888899888899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHH----HHhhCCC-CcEEEEec-CCCcchHHHHHHHHHhcCCCCceEEeeC
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARV----IADVSKS-DKIVVEKS-TVPVKTAEAIEKILTHNSKGIKFQILSN 155 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~----i~~~l~~-~~iVi~~S-Tv~~gt~~~l~~~l~~~~~g~~~~v~~~ 155 (480)
||+|||+ ..+.+++++ +.+.+++ +++|+..+ ++.+++.+.+.+.+.+..++..+.+..+
T Consensus 89 Vilav~~---------------~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~~~~~v~~g 153 (366)
T 1evy_A 89 ILFVIPT---------------QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLSVLAG 153 (366)
T ss_dssp EEECCCH---------------HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCGGGEEEEES
T ss_pred EEECCCh---------------HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCCCcEEEEeC
Confidence 9999984 245778888 8888887 88887776 6777766666666665422223556677
Q ss_pred CccccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhcc--CCCCeEEeCCchhHHHhhhh---------------
Q 011641 156 PEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHW--VPEDRILTTNLWSAELSKLA--------------- 218 (480)
Q Consensus 156 Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~--~~~~~v~~~~~~~ae~~Kl~--------------- 218 (480)
|.+..+... ..+..+++++. +++..+.++++|+.. +. ..+...++...+|.|++
T Consensus 154 p~~~~~~~~----g~~~~~~~~~~----~~~~~~~v~~ll~~~g~g~-~~~~~~di~~~~~~k~~~n~~~~~~~~~~~~~ 224 (366)
T 1evy_A 154 PSFAIEVAT----GVFTCVSIASA----DINVARRLQRIMSTGDRSF-VCWATTDTVGCEVASAVKNVLAIGSGVANGLG 224 (366)
T ss_dssp SCCHHHHHT----TCCEEEEEECS----SHHHHHHHHHHHSCTTSSE-EEEEESCHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CChHHHHHh----CCceEEEEecC----CHHHHHHHHHHhcCCCCeE-EEEEcCCchHHHHHHHHHhHHHHHHHHHhhcc
Confidence 766542111 12223455654 467889999999987 42 33455677777776654
Q ss_pred --HhHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhc--------CCC--C---CCCCCccCCCCcc------ccc--hhH
Q 011641 219 --ANAFLAQRISSVNAMSALCEATGANVSQVAFAVG--------TDS--R---IGPKFLNASVGFG------GSC--FQK 275 (480)
Q Consensus 219 --~N~~~~~~ia~~nE~~~l~~~~Gid~~~v~~~~~--------~~~--~---~~~~~~~pg~g~g------G~c--l~k 275 (480)
+|.++++.+++++|+..+|++.|+|+.++.++.+ .++ + ++..+. -|..+. +.| ..|
T Consensus 225 ~~~n~~~~~~~~~~~E~~~la~a~Gi~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~e~~~ 303 (366)
T 1evy_A 225 MGLNARAALIMRGLLEIRDLTAALGGDGSAVFGLAGLGDLQLTCSSELSRNFTVGKKLG-KGLPIEEIQRTSKAVAEGVA 303 (366)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTCCCTTTTSTTTHHHHHHHHTCTTSHHHHHHHHHH-TTCCHHHHHC---CCCHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHhCCCCccccccccchhheeeecCCCCchHHHHHHHh-CCCCHHHHHHHcCCeeehHH
Confidence 5667788999999999999999999865543211 011 0 010110 111111 223 359
Q ss_pred hHHHHHHHHHHCCCChhhHHHHHHHHHhHH--hHHHHHHHHHH
Q 011641 276 DILNLVYICECNGLPEVAEYWKQVIKINDY--QKSRFVNRVVA 316 (480)
Q Consensus 276 D~~~l~~~a~~~g~~~~~~~~~~~~~~N~~--~~~~~~~~~~~ 316 (480)
|..++.++++++|++ .++.+.+.++... .|+..++.+++
T Consensus 304 ~~~~v~~~a~~~gv~--~P~~~~v~~~~~~~~~~~~~~~~l~~ 344 (366)
T 1evy_A 304 TADPLMRLAKQLKVK--MPLCHQIYEIVYKKKNPRDALADLLS 344 (366)
T ss_dssp HHHHHHHHHHHHTCC--CHHHHHHHHHHHSCCCHHHHHHHHGG
T ss_pred HHHHHHHHHHHhCCC--CcHHHHHHHHHHCCCCHHHHHHHHHc
Confidence 999999999999998 6777777765543 56666666543
No 39
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.86 E-value=2.9e-21 Score=197.34 Aligned_cols=269 Identities=15% Similarity=0.147 Sum_probs=185.8
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCC-------CeEEEEECCHH-----HHHHHHcC-CCCCcCCChHHHHhhhcCCCEE
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPS-------IEVAVVDISVS-----RINAWNSD-QLPIYEPGLDGVVKQCRGKNLF 67 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G-------~~V~~~D~~~~-----~v~~l~~~-~~~~~e~~l~~~~~~~~~~~l~ 67 (480)
||||+|||+|+||.++|..|+++ | ++|++||++++ +++.+++. ....+.++.. ...+++
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~--G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~------~~~~i~ 92 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTN--AKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVP------LPHNIV 92 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHH--HHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCB------CCTTEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHc--CCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCccc------CcCCeE
Confidence 57999999999999999999998 8 99999999998 88888763 2333333321 113578
Q ss_pred EecCHHHhhccCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHh----hCCCCcEEEEec-CCCc--chHHHHHHH
Q 011641 68 FSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIAD----VSKSDKIVVEKS-TVPV--KTAEAIEKI 140 (480)
Q Consensus 68 ~t~d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~----~l~~~~iVi~~S-Tv~~--gt~~~l~~~ 140 (480)
+++|++++++++|+||+|||+ ..++++++++.+ .++++++|+..+ ++.+ ++.+.+.+.
T Consensus 93 ~~~~~~ea~~~aDvVilav~~---------------~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~ 157 (375)
T 1yj8_A 93 AHSDLASVINDADLLIFIVPC---------------QYLESVLASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNY 157 (375)
T ss_dssp EESSTHHHHTTCSEEEECCCH---------------HHHHHHHHHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHH
T ss_pred EECCHHHHHcCCCEEEEcCCH---------------HHHHHHHHHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHH
Confidence 889988888999999999984 246888899988 888899888776 4555 344455555
Q ss_pred HHhcCCCCceEEeeCCccccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhh--
Q 011641 141 LTHNSKGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLA-- 218 (480)
Q Consensus 141 l~~~~~g~~~~v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~-- 218 (480)
+++.. +..+.+..+|.+..+... ..+..+++|+. +++..+.++++|+..+ ...+...|+..++|.|++
T Consensus 158 l~~~~-~~~~~v~~gp~~a~~v~~----g~~~~~~~~~~----~~~~~~~v~~ll~~~g-~~~~~~~di~~~~~~k~l~N 227 (375)
T 1yj8_A 158 ISDFL-NIPCSALSGANIAMDVAM----ENFSEATIGGN----DKDSLVIWQRVFDLPY-FKINCVNETIEVEICGALKN 227 (375)
T ss_dssp HHHHS-SSCEEEEECSCCHHHHHT----TCCEEEEEECS----CHHHHHHHHHHHCBTT-EEEEEESCSHHHHHHHHHHH
T ss_pred HHHHc-CCCEEEEeCCchHHHHHh----CCCeEEEEecC----CHHHHHHHHHHhCCCC-eEEEEeCCcHHHHHHHHHHH
Confidence 55432 134556677766542111 12233555655 4678899999999864 234556788888887665
Q ss_pred ---------------HhHHHHHHHHHHHHHHHHHHHh--CCCHHHHHHH------hc--CCCC---CCCCCccCC--CCc
Q 011641 219 ---------------ANAFLAQRISSVNAMSALCEAT--GANVSQVAFA------VG--TDSR---IGPKFLNAS--VGF 268 (480)
Q Consensus 219 ---------------~N~~~~~~ia~~nE~~~l~~~~--Gid~~~v~~~------~~--~~~~---~~~~~~~pg--~g~ 268 (480)
+|.+.++.+++++|+..+++++ |+|+.++.+. +. ...+ ++..+...| ..+
T Consensus 228 ~~~~~~g~~~~~~~~~n~~~a~~~~~~~E~~~la~a~G~G~~~~~~~~~~g~~dl~~t~~~~~~~~~~~~~~~~g~~~~~ 307 (375)
T 1yj8_A 228 IITLACGFCDGLNLPTNSKSAIIRNGINEMILFGKVFFQKFNENILLESCGFADIITSFLAGRNAKCSAEFIKSTPKKTW 307 (375)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHSSCCCGGGGGSTTTHHHHHHHHSSSSHHHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHhccCCCcchhhccccccceeEeeeCCccHHHHHHHHhcCCCCCH
Confidence 5557889999999999999999 6998666432 11 1111 111111102 111
Q ss_pred c--------ccch--hHhHHHHHHHHHHCCC--ChhhHHHHHHHHHhH
Q 011641 269 G--------GSCF--QKDILNLVYICECNGL--PEVAEYWKQVIKIND 304 (480)
Q Consensus 269 g--------G~cl--~kD~~~l~~~a~~~g~--~~~~~~~~~~~~~N~ 304 (480)
. |.+. .+|..++.+.++++|+ + .++.+.+.++..
T Consensus 308 ~d~~~~~~~g~~~E~~~~~~~v~~~a~~~gv~~~--~P~~~~v~~~~~ 353 (375)
T 1yj8_A 308 EELENEILKGQKLQGTVTLKYVYHMIKEKNMTNE--FPLFTVLHKISF 353 (375)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCGGG--CHHHHHHHHHHH
T ss_pred HHHHHhhcCCcEeeHHHHHHHHHHHHHHhCCCCC--CCHHHHHHHHHh
Confidence 1 4554 8899999999999999 7 677777665543
No 40
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.86 E-value=8.2e-21 Score=184.39 Aligned_cols=231 Identities=13% Similarity=0.115 Sum_probs=164.6
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEEC--CHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccC
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDI--SVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~--~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
|||+|||+|.||.++|..|+++ |++|++||+ ++++++.+.+. +++ ++++++++++
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~--g~~V~~~~~~~~~~~~~~~~~~-------------------g~~--~~~~~~~~~a 57 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSR--GVEVVTSLEGRSPSTIERARTV-------------------GVT--ETSEEDVYSC 57 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT--TCEEEECCTTCCHHHHHHHHHH-------------------TCE--ECCHHHHHTS
T ss_pred CeEEEEechHHHHHHHHHHHHC--CCeEEEeCCccCHHHHHHHHHC-------------------CCc--CCHHHHHhcC
Confidence 7999999999999999999998 999999999 77877776541 123 5566778999
Q ss_pred cEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCccc
Q 011641 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFL 159 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (480)
|+||+|||++.. ++ .+.++.+.+++ +|++.||+.+.+.+.+.+.+.+. + +..+|...
T Consensus 58 Dvvi~~v~~~~~--------------~~-~~~~~~~~~~~--~vi~~s~~~~~~~~~l~~~~~~~--g----~~~~~v~~ 114 (264)
T 1i36_A 58 PVVISAVTPGVA--------------LG-AARRAGRHVRG--IYVDINNISPETVRMASSLIEKG--G----FVDAAIMG 114 (264)
T ss_dssp SEEEECSCGGGH--------------HH-HHHHHHTTCCS--EEEECSCCCHHHHHHHHHHCSSS--E----EEEEEECS
T ss_pred CEEEEECCCHHH--------------HH-HHHHHHHhcCc--EEEEccCCCHHHHHHHHHHHhhC--C----eeeeeeeC
Confidence 999999986421 12 23567777765 88888999888888877766542 1 12234322
Q ss_pred cccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCC-chhHHHhhhhHhHHHHHHHHHHHHHHHHHH
Q 011641 160 AEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTN-LWSAELSKLAANAFLAQRISSVNAMSALCE 238 (480)
Q Consensus 160 ~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~-~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~ 238 (480)
.+..+..+ .. +++|+. +. +.+++ |+.++. ..+...+ ++.+++.|++.|.+....+++++|+..+++
T Consensus 115 ~~~~~~~g---~~-~~~~g~----~~---~~~~~-l~~~g~-~~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~la~ 181 (264)
T 1i36_A 115 SVRRKGAD---IR-IIASGR----DA---EEFMK-LNRYGL-NIEVRGREPGDASAIKMLRSSYTKGVSALLWETLTAAH 181 (264)
T ss_dssp CHHHHGGG---CE-EEEEST----TH---HHHHG-GGGGTC-EEEECSSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccccC---Ce-EEecCC----cH---HHhhh-HHHcCC-eeEECCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22111111 12 667775 22 67888 998863 2344454 899999999999999999999999999999
Q ss_pred HhCCCHHHHHHHhcCCCCCCCCC-------c--cCCCCccccchhHhHHHHHHHHHHCCCChhhHHHHHHH
Q 011641 239 ATGANVSQVAFAVGTDSRIGPKF-------L--NASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVI 300 (480)
Q Consensus 239 ~~Gid~~~v~~~~~~~~~~~~~~-------~--~pg~g~gG~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~ 300 (480)
++|+|.+ +++.+.... |..+ + ...+|+. +.||+..+.+.+++. ++ .++.+.+.
T Consensus 182 ~~G~~~~-~~~~~~~~~--g~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~a~~~-v~--~p~~~~v~ 243 (264)
T 1i36_A 182 RLGLEED-VLEMLEYTE--GNDFRESAISRLKSSCIHARR---RYEEMKEVQDMLAEV-ID--PVMPTCII 243 (264)
T ss_dssp HTTCHHH-HHHHHHTTS--CSSTHHHHHHHHHHHHHTHHH---HHHHHHHHHHHHHTT-SC--CSHHHHHH
T ss_pred HcCCcHH-HHHHHHHhc--CccHHHHHHHHhcCCCCcchh---hHHHHHHHHHHHHHh-cC--chHHHHHH
Confidence 9999986 778877542 2111 1 1223332 679999999999999 88 55555544
No 41
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.85 E-value=4.8e-20 Score=193.75 Aligned_cols=250 Identities=11% Similarity=0.138 Sum_probs=181.6
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhcc---
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE--- 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~--- 78 (480)
|||+|||+|.||.++|.+|+++ |++|++||+++++++.+.+... ..++..+++++++++.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~~~---------------~~gi~~~~s~~e~v~~l~~ 68 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESR--GYTVAIYNRTTSKTEEVFKEHQ---------------DKNLVFTKTLEEFVGSLEK 68 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHTT---------------TSCEEECSSHHHHHHTBCS
T ss_pred CcEEEEeeHHHHHHHHHHHHhC--CCEEEEEcCCHHHHHHHHHhCc---------------CCCeEEeCCHHHHHhhccC
Confidence 6899999999999999999998 9999999999999988875210 0146778898887776
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCcc
Q 011641 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEF 158 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (480)
+|+||+|||++ ..++++++++.+.++++++||+.|+..+..++++.+.+++.+ . .++.+|..
T Consensus 69 aDvVilavp~~--------------~~v~~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g--~--~~v~~pv~ 130 (474)
T 2iz1_A 69 PRRIMLMVQAG--------------AATDATIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSG--I--NFIGTGVS 130 (474)
T ss_dssp SCEEEECCCTT--------------HHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSS--C--EEEEEEEC
T ss_pred CCEEEEEccCc--------------hHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCC--C--eEECCCCC
Confidence 99999999864 235778889999999999999988887777777766665432 2 23345654
Q ss_pred ccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCC-------eEEeCCchhHHHhhhhHhHHHHHHHHHHH
Q 011641 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPED-------RILTTNLWSAELSKLAANAFLAQRISSVN 231 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~-------~v~~~~~~~ae~~Kl~~N~~~~~~ia~~n 231 (480)
..+..+..+ + .++.|+. ++..+.++++|+.++... ..+.++.+.+.++|+++|.+.+..+.+++
T Consensus 131 gg~~~a~~g---~-~i~~gg~-----~~~~~~v~~ll~~~g~~~~~dge~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~la 201 (474)
T 2iz1_A 131 GGEKGALLG---P-SMMPGGQ-----KEAYDLVAPIFEQIAAKAPQDGKPCVAYMGANGAGHYVKMVHNGIEYGDMQLIA 201 (474)
T ss_dssp SHHHHHHHC---C-CEEEEEC-----HHHHHHHHHHHHHHSCBCTTTCCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhhhccC---C-eEEecCC-----HHHHHHHHHHHHHHhcccccCCCceEEEECCccHHHHHHHHHhHHHHHHHHHHH
Confidence 333222221 2 3677874 788999999999886420 24556788999999999999999999999
Q ss_pred HHHHHHHH-hCCCHHHHHHHhc---CCCCCCC-------C-Cc--cCCCC-ccccchh-----HhHH-HHHHHHHHCCCC
Q 011641 232 AMSALCEA-TGANVSQVAFAVG---TDSRIGP-------K-FL--NASVG-FGGSCFQ-----KDIL-NLVYICECNGLP 290 (480)
Q Consensus 232 E~~~l~~~-~Gid~~~v~~~~~---~~~~~~~-------~-~~--~pg~g-~gG~cl~-----kD~~-~l~~~a~~~g~~ 290 (480)
|+..++++ +|++.+++.+++. ... .++ . +. ++.+| +-..-+. ||.. .....|++.|++
T Consensus 202 Ea~~l~~~~~Gl~~~~~~~l~~~w~~g~-~~s~l~~~~~~~l~~~d~~~g~~~vd~i~D~~~~k~tG~~~~~~A~~~gv~ 280 (474)
T 2iz1_A 202 ESYDLLKRILGLSNAEIQAIFEEWNEGE-LDSYLIEITKEVLKRKDDEGEGYIVDKILDKAGNKGTGKWTSESALDLGVP 280 (474)
T ss_dssp HHHHHHHHTSCCCHHHHHHHHHHHTTTT-TCBHHHHHHHHHTTCBCSSSSSBGGGGBCSCCCCCSHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHhcCCC-ccccHHHhhhhHhhcCCCCCChhHHHHHHHhhcccchHHHHHHHHHHcCCC
Confidence 99999999 8999999988883 221 110 1 11 12222 2222222 6665 567889999998
Q ss_pred hhhHHHHH
Q 011641 291 EVAEYWKQ 298 (480)
Q Consensus 291 ~~~~~~~~ 298 (480)
.+++..
T Consensus 281 --~P~~~~ 286 (474)
T 2iz1_A 281 --LPLITE 286 (474)
T ss_dssp --CHHHHH
T ss_pred --CchHHH
Confidence 555554
No 42
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.84 E-value=1.2e-20 Score=190.98 Aligned_cols=267 Identities=16% Similarity=0.177 Sum_probs=180.9
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCC-------CeEEEEECCHH-----HHHHHHcCC-CCCcCCChHHHHhhhcCCCEEE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPS-------IEVAVVDISVS-----RINAWNSDQ-LPIYEPGLDGVVKQCRGKNLFF 68 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G-------~~V~~~D~~~~-----~v~~l~~~~-~~~~e~~l~~~~~~~~~~~l~~ 68 (480)
|||+|||+|+||.++|..|+++ | ++|++||++++ +++.+++.+ ...+.++.. ...++++
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~--g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~------~~~~~~~ 80 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGN--AAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHK------LPPNVVA 80 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH--HHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCC------CCTTEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhc--CCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCccc------CccCeEE
Confidence 7999999999999999999998 8 99999999998 888887532 222222211 0135788
Q ss_pred ecCHHHhhccCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecC-CC--cchHHHHHHHHHhcC
Q 011641 69 STDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST-VP--VKTAEAIEKILTHNS 145 (480)
Q Consensus 69 t~d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST-v~--~gt~~~l~~~l~~~~ 145 (480)
++++++++++||+||+|||+. .+.++++++.+.++++++|+..++ +. +++.+.+.+.+++..
T Consensus 81 ~~~~~~~~~~aD~Vilav~~~---------------~~~~v~~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~ 145 (354)
T 1x0v_A 81 VPDVVQAAEDADILIFVVPHQ---------------FIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERL 145 (354)
T ss_dssp ESSHHHHHTTCSEEEECCCGG---------------GHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHH
T ss_pred EcCHHHHHcCCCEEEEeCCHH---------------HHHHHHHHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHHHc
Confidence 889988889999999999842 257888999999998998887765 44 454444555554432
Q ss_pred CCCceEEeeCCccccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhh-------
Q 011641 146 KGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLA------- 218 (480)
Q Consensus 146 ~g~~~~v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~------- 218 (480)
+..+.+..+|.+..+.. . ..+..+++++. +++..+.++++|+..+. ..+...|+..++|.|++
T Consensus 146 -~~~~~v~~gp~~a~~v~--~--g~~~~~~~~~~----~~~~~~~v~~ll~~~g~-~~~~~~di~~~~~~k~~~N~~~~~ 215 (354)
T 1x0v_A 146 -GIPMSVLMGANIASEVA--D--EKFCETTIGCK----DPAQGQLLKELMQTPNF-RITVVQEVDTVEICGALKNVVAVG 215 (354)
T ss_dssp -TCCEEEEECSCCHHHHH--T--TCCEEEEEECS----SHHHHHHHHHHHCBTTE-EEEEESCHHHHHHHHHHHHHHHHH
T ss_pred -CCCEEEEECCCcHHHHH--h--cCCceEEEEEC----CHHHHHHHHHHhCCCCE-EEEEcCCchHhHHHHHHHHHHHHH
Confidence 12355667776543211 0 12234556655 46788999999998642 33455788888888776
Q ss_pred ----------HhHHHHHHHHHHHHHHHHHHHhCC---CHHHHHHH------hcC--CCC---CCCCCccCCCCcc-----
Q 011641 219 ----------ANAFLAQRISSVNAMSALCEATGA---NVSQVAFA------VGT--DSR---IGPKFLNASVGFG----- 269 (480)
Q Consensus 219 ----------~N~~~~~~ia~~nE~~~l~~~~Gi---d~~~v~~~------~~~--~~~---~~~~~~~pg~g~g----- 269 (480)
+|.++++....++|+..++++.|+ ++.++.+. +.+ ..+ ++..+..+|..+.
T Consensus 216 ~g~~~~~~~~~n~~~~~~~~~~~E~~~la~a~G~~~~~~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (354)
T 1x0v_A 216 AGFCDGLGFGDNTKAAVIRLGLMEMIAFAKLFCSGPVSSATFLESCGVADLITTCYGGRNRKVAEAFARTGKSIEQLEKE 295 (354)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHSSSCCCGGGGGSTTTHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHH
T ss_pred HHHHHHccCCccHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccchHHHHHHhhcccccHHHHHHHHhcCCCHHHHHHh
Confidence 666778999999999999999999 87665321 110 011 1111111111111
Q ss_pred ---ccch--hHhHHHHHHHHHHCCC--ChhhHHHHHHHHHh
Q 011641 270 ---GSCF--QKDILNLVYICECNGL--PEVAEYWKQVIKIN 303 (480)
Q Consensus 270 ---G~cl--~kD~~~l~~~a~~~g~--~~~~~~~~~~~~~N 303 (480)
|.+. .||..++.+.++++|+ + .++.+.+.++.
T Consensus 296 ~~~g~~~E~~~~~g~v~~~a~~~gv~~~--~P~~~~v~~~~ 334 (354)
T 1x0v_A 296 LLNGQKLQGPETARELYSILQHKGLVDK--FPLFMAVYKVC 334 (354)
T ss_dssp HSTTCCCHHHHHHHHHHHHHHHHTCGGG--SHHHHHHHHHH
T ss_pred hcCCcEeehHHHHHHHHHHHHHhCCCCC--CCHHHHHHHHH
Confidence 3333 6889999999999999 7 66666655543
No 43
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.84 E-value=1.4e-19 Score=179.68 Aligned_cols=266 Identities=13% Similarity=0.082 Sum_probs=171.9
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhh---c
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV---S 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~---~ 77 (480)
||||+|||+|.||.++|..|+++ |++|++||+++++++.+++....+...+- . . ..++.++++ .+.. +
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~g~~~~~~~~-~-~----~~~~~~~~~-~~~~~~~~ 73 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQG--GNDVTLIDQWPAHIEAIRKNGLIADFNGE-E-V----VANLPIFSP-EEIDHQNE 73 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHCEEEEETTE-E-E----EECCCEECG-GGCCTTSC
T ss_pred CCeEEEECcCHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHhCCEEEEeCCC-e-e----Eecceeecc-hhhcccCC
Confidence 58999999999999999999998 99999999999999988763221111000 0 0 012333332 3333 4
Q ss_pred cCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCc
Q 011641 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPE 157 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
++|+||+|||++ .+.++++++.+.++++++|+..++ ..++.+.+.+.+.+... ..-....+.+
T Consensus 74 ~~d~vi~~v~~~---------------~~~~v~~~l~~~l~~~~~iv~~~~-g~~~~~~l~~~~~~~~v-i~g~~~~~~~ 136 (316)
T 2ew2_A 74 QVDLIIALTKAQ---------------QLDAMFKAIQPMITEKTYVLCLLN-GLGHEDVLEKYVPKENI-LVGITMWTAG 136 (316)
T ss_dssp CCSEEEECSCHH---------------HHHHHHHHHGGGCCTTCEEEECCS-SSCTHHHHTTTSCGGGE-EEEEECCCCE
T ss_pred CCCEEEEEeccc---------------cHHHHHHHHHHhcCCCCEEEEecC-CCCcHHHHHHHcCCccE-EEEEeeeeeE
Confidence 899999999842 357888999999998998887654 34454555544433210 0001122334
Q ss_pred cccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHH---------------
Q 011641 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAF--------------- 222 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~--------------- 222 (480)
+..|+........ .+.++.. ...+++..+.++++|+..+. ......++..++|.|++.|+.
T Consensus 137 ~~~p~~~~~~~~g--~~~i~~~-~~~~~~~~~~~~~ll~~~g~-~~~~~~d~~~~~~~Kl~~N~~~~~~~al~~~~~~~~ 212 (316)
T 2ew2_A 137 LEGPGRVKLLGDG--EIELENI-DPSGKKFALEVVDVFQKAGL-NPSYSSNVRYSIWRKACVNGTLNGLCTILDCNIAEF 212 (316)
T ss_dssp EEETTEEEECSCC--CEEEEES-SGGGHHHHHHHHHHHHHTTC-CEEECTTHHHHHHHHHHHHTTHHHHHHHHTCCHHHH
T ss_pred EcCCCEEEEecCC--cEEEeec-CCCccHHHHHHHHHHHhCCC-CcEEchhHHHHHHHHHHHhhhHHHHHHHhCCcHHHH
Confidence 5556554332222 2334432 11247788999999999863 345567899999999999963
Q ss_pred ------HHHHHHHHHHHHHHHHHhCCCH--HHHHHHhcC--C----CCCCCCCc-cC-CCCccccchhHhHHHHHHHHHH
Q 011641 223 ------LAQRISSVNAMSALCEATGANV--SQVAFAVGT--D----SRIGPKFL-NA-SVGFGGSCFQKDILNLVYICEC 286 (480)
Q Consensus 223 ------~~~~ia~~nE~~~l~~~~Gid~--~~v~~~~~~--~----~~~~~~~~-~p-g~g~gG~cl~kD~~~l~~~a~~ 286 (480)
+.+..+.++|+..+++++|+++ ..+.+.+.. . ++..+.++ .. ..|+--. +.+|..++.+.+++
T Consensus 213 ~~~~~~~~~~~~~~~E~~~la~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~sm~~d~~~~g~~~E-~~~~~~~~~~~a~~ 291 (316)
T 2ew2_A 213 GALPVSESLVKTLISEFAAVAEKEAIYLDQAEVYTHIVQTYDPNGIGLHYPSMYQDLIKNHRLTE-IDYINGAVWRKGQK 291 (316)
T ss_dssp HTSTTHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTTCTTTTTTSCCHHHHHHTTTCCCCS-GGGTHHHHHHHHHH
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHhccccCCCCCcHHHHHHHHcCCcch-HHHHhhHHHHHHHH
Confidence 3677889999999999999986 355555432 1 11101010 12 3344445 78999999999999
Q ss_pred CCCChhhHHHHHH
Q 011641 287 NGLPEVAEYWKQV 299 (480)
Q Consensus 287 ~g~~~~~~~~~~~ 299 (480)
+|++ .++.+.+
T Consensus 292 ~gv~--~P~~~~~ 302 (316)
T 2ew2_A 292 YNVA--TPFCAML 302 (316)
T ss_dssp HTCC--CHHHHHH
T ss_pred hCCC--CCHHHHH
Confidence 9998 5555543
No 44
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.83 E-value=3.3e-20 Score=186.65 Aligned_cols=257 Identities=15% Similarity=0.172 Sum_probs=173.8
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|.||+++|..|+++ |++|++||+++++++.+++.+...++++.. .++++++++++ ++++|+
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~--G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~--------~~~~~~~~~~~-~~~aDv 83 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHEN--GEEVILWARRKEIVDLINVSHTSPYVEESK--------ITVRATNDLEE-IKKEDI 83 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHSCBTTBTTCC--------CCSEEESCGGG-CCTTEE
T ss_pred CcEEEECcCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCCcccCCCCe--------eeEEEeCCHHH-hcCCCE
Confidence 8999999999999999999998 999999999999999998643222333331 03677888888 899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEec-CCCcchHHHHHHHHHhcCCCCceEEeeCCcccc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKS-TVPVKTAEAIEKILTHNSKGIKFQILSNPEFLA 160 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~S-Tv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~ 160 (480)
||+|||++ .++++++++.+ ++++||..+ ++.+++.+.+.+.+.+..+ ..+.+..+|.+..
T Consensus 84 Vil~vk~~---------------~~~~v~~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~~-~~~~~~~~P~~~~ 144 (335)
T 1z82_A 84 LVIAIPVQ---------------YIREHLLRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEILG-CPYAVLSGPSHAE 144 (335)
T ss_dssp EEECSCGG---------------GHHHHHTTCSS---CCSEEEECCCCCCTTTCCCHHHHHHHHTC-CCEEEEESSCCHH
T ss_pred EEEECCHH---------------HHHHHHHHhCc---CCCEEEEEeCCCCCCccCcHHHHHHHHcC-CceEEEECCccHH
Confidence 99999842 24666666554 678888777 5677666666666655322 2345566776544
Q ss_pred ccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhH-----------------hHHH
Q 011641 161 EGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAA-----------------NAFL 223 (480)
Q Consensus 161 ~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~-----------------N~~~ 223 (480)
+... ..+..+++|+. + .+.++++|+..+. ......|+...+|.|++. |.++
T Consensus 145 ~~~~----g~~~~~~~g~~-----~--~~~~~~ll~~~g~-~~~~~~di~~~~~~k~l~N~~~~~~g~~~g~~~~~n~~~ 212 (335)
T 1z82_A 145 EVAK----KLPTAVTLAGE-----N--SKELQKRISTEYF-RVYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKA 212 (335)
T ss_dssp HHHT----TCCEEEEEEET-----T--HHHHHHHHCCSSE-EEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHhC----CCceEEEEEeh-----h--HHHHHHHhCCCCE-EEEecCchHHHHHHHHHHhHHHHHHHHHhcCCCCchhHH
Confidence 2111 12224556654 2 6788999988652 334556777777765554 4556
Q ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHhcC--------CC--C---CCCCCccCCCCcc------ccch--hHhHHHHHH
Q 011641 224 AQRISSVNAMSALCEATGANVSQVAFAVGT--------DS--R---IGPKFLNASVGFG------GSCF--QKDILNLVY 282 (480)
Q Consensus 224 ~~~ia~~nE~~~l~~~~Gid~~~v~~~~~~--------~~--~---~~~~~~~pg~g~g------G~cl--~kD~~~l~~ 282 (480)
++...+++|+..++++.|+|+.++.++.+. ++ + .+..+. -|..+. |.+. .||..++.+
T Consensus 213 a~~~~~~~E~~~la~a~G~~~~~~~~l~~~~~~~~t~~s~~~~n~~~~~~~~-~g~~~~~~~~~~g~~~e~~~~~~~v~~ 291 (335)
T 1z82_A 213 ALETRGIYEIARFGMFFGADQKTFMGLAGIGDLMVTCNSRYSRNRRFGELIA-RGFNPLKLLESSNQVVEGAFTVKAVMK 291 (335)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHTSTTTHHHHHHHHHCTTCHHHHHHHHHH-HTCCHHHHHHTCSSCCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCChhhhcccccccceeeeccCccCcHHHHHHHHh-CCCCHHHHHHhcCCeeeHHHHHHHHHH
Confidence 788899999999999999999877543210 11 0 111111 111111 3333 599999999
Q ss_pred HHHHCCCChhhHHHHHHHHHh
Q 011641 283 ICECNGLPEVAEYWKQVIKIN 303 (480)
Q Consensus 283 ~a~~~g~~~~~~~~~~~~~~N 303 (480)
++++.|++ .++.+.+.++.
T Consensus 292 ~a~~~gv~--~P~~~~v~~~~ 310 (335)
T 1z82_A 292 IAKENKID--MPISEEVYRVV 310 (335)
T ss_dssp HHHHTTCC--CHHHHHHHHHH
T ss_pred HHHHhCCC--CcHHHHHHHHH
Confidence 99999998 67777666544
No 45
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.78 E-value=1.4e-18 Score=167.00 Aligned_cols=198 Identities=14% Similarity=0.143 Sum_probs=131.5
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHH--HHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhcc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSR--INAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE 78 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~--v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (480)
.|||+|||+|.||.++|..|+++ |++|++||+++++ .+...... .....+++... .+... ++++++++++
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~~-~~~~~e~~~~ 90 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADL--GHEVTIGTRDPKATLARAEPDAM---GAPPFSQWLPE--HPHVH-LAAFADVAAG 90 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHTCC----------CCHHHHGGG--STTCE-EEEHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCEEEEEeCChhhhhhhhhhhhh---cchhhhHHHhh--cCcee-ccCHHHHHhc
Confidence 37999999999999999999998 9999999999987 11110000 00001111111 02233 4567788899
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHH-HhhCCCCcEEEEec-----------CCCcchHHHHHHHHHhcCC
Q 011641 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVI-ADVSKSDKIVVEKS-----------TVPVKTAEAIEKILTHNSK 146 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i-~~~l~~~~iVi~~S-----------Tv~~gt~~~l~~~l~~~~~ 146 (480)
||+||+|||++. +.+++.++ .+.+ ++++||+.| |+.|++...+.+.+++..+
T Consensus 91 aDvVilavp~~~---------------~~~~~~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~ 154 (245)
T 3dtt_A 91 AELVVNATEGAS---------------SIAALTAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRTFP 154 (245)
T ss_dssp CSEEEECSCGGG---------------HHHHHHHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHHST
T ss_pred CCEEEEccCcHH---------------HHHHHHHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHHCC
Confidence 999999998532 34556667 6666 789999988 7777776655555554321
Q ss_pred CC----ceEEeeCCccccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHH
Q 011641 147 GI----KFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAF 222 (480)
Q Consensus 147 g~----~~~v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~ 222 (480)
+. .+..+.+|....+..+... +..+++++. ++++.+.++++|+.++....++.++++.|..+|+++|.+
T Consensus 155 ~~~vv~~~~~~~a~v~~~~~~a~~g---~~~~~v~g~----d~~~~~~v~~ll~~~g~~~~~~~G~~g~a~~~k~~~~~~ 227 (245)
T 3dtt_A 155 EAKVVKTLNTMNASLMVDPGRAAGG---DHSVFVSGN----DAAAKAEVATLLKSLGHQDVIDLGDITTARGAEMLLPVW 227 (245)
T ss_dssp TSEEEECSTTSCHHHHHCGGGTGGG---CCCEEEECS----CHHHHHHHHHHHHHTTCCCEEEEESGGGHHHHHTTHHHH
T ss_pred CCeEEEeecccCHHHhcCccccCCC---CeeEEEECC----CHHHHHHHHHHHHHcCCCceeccCcHHHHHHhhhhHHHH
Confidence 10 1223455655554433221 223667776 478999999999998732246788999999999999999
Q ss_pred HHHHHHH
Q 011641 223 LAQRISS 229 (480)
Q Consensus 223 ~~~~ia~ 229 (480)
..+++++
T Consensus 228 ~~l~~~~ 234 (245)
T 3dtt_A 228 IRLWGAL 234 (245)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 9888654
No 46
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.77 E-value=4.6e-17 Score=159.37 Aligned_cols=196 Identities=15% Similarity=0.173 Sum_probs=143.3
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCC--eEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc-
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS- 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~- 77 (480)
||||+|||+|.||..+|..|+++ |+ +|++||+++++++.+++... ....+++++++++
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~--g~~~~V~~~d~~~~~~~~~~~~g~-----------------~~~~~~~~~~~~~~ 61 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRS--GFKGKIYGYDINPESISKAVDLGI-----------------IDEGTTSIAKVEDF 61 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHTTS-----------------CSEEESCGGGGGGT
T ss_pred CcEEEEEecCHHHHHHHHHHHhc--CCCcEEEEEeCCHHHHHHHHHCCC-----------------cccccCCHHHHhcC
Confidence 78999999999999999999998 88 99999999999887764210 0134567777788
Q ss_pred cCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCc
Q 011641 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPE 157 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
+||+||+|||.. .+.++++++.+.++++++|++.+++.+.+.+.+.+.+.+.. ...+-.++++
T Consensus 62 ~aDvVilavp~~---------------~~~~v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~~~--v~~~p~~~~~ 124 (281)
T 2g5c_A 62 SPDFVMLSSPVR---------------TFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGKRF--VGGHPIAGTE 124 (281)
T ss_dssp CCSEEEECSCHH---------------HHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGGE--ECEEEECCCS
T ss_pred CCCEEEEcCCHH---------------HHHHHHHHHHhhCCCCcEEEECCCCcHHHHHHHHHhccccc--eeeccccCCc
Confidence 999999999842 34677788888899999999888887776677777765410 0112234455
Q ss_pred cccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEe-CCchhHHHhhhhHhHHHHHHHHHHHHHHH
Q 011641 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILT-TNLWSAELSKLAANAFLAQRISSVNAMSA 235 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~-~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~ 235 (480)
..+|+.+..+++....+++... ...+++..+.++++|+.++ ..++. .+....+++|++.|....+.+++++.+..
T Consensus 125 ~~gp~~a~~~l~~g~~~~~~~~-~~~~~~~~~~v~~l~~~~g--~~~~~~~~~~~d~~~~~~~~~~~~~a~~~~~~~~~ 200 (281)
T 2g5c_A 125 KSGVEYSLDNLYEGKKVILTPT-KKTDKKRLKLVKRVWEDVG--GVVEYMSPELHDYVFGVVSHLPHAVAFALVDTLIH 200 (281)
T ss_dssp CCSGGGCCSSTTTTCEEEECCC-SSSCHHHHHHHHHHHHHTT--CEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred cCChhhhhhHHhCCCCEEEecC-CCCCHHHHHHHHHHHHHcC--CEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5566776666655554445421 1125788999999999985 34544 44566899999999988888888887765
No 47
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.76 E-value=9.7e-18 Score=167.08 Aligned_cols=207 Identities=13% Similarity=0.094 Sum_probs=139.1
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHc------------CCCCCcCCChHHHHhhhcCCCEEE
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS------------DQLPIYEPGLDGVVKQCRGKNLFF 68 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~------------~~~~~~e~~l~~~~~~~~~~~l~~ 68 (480)
|+||+|||+|.||.++|..|+++ ||+|++||+++++++.+.+ |..+-. ...+... +++++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~-~~~~~~~-----~~i~~ 77 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG--GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGS-LSAEEQL-----SLISS 77 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSS-SCHHHHH-----HTEEE
T ss_pred CceEEEEeeCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccc-cchHHHh-----hceEE
Confidence 47899999999999999999998 9999999999999887753 111000 0001111 25889
Q ss_pred ecCHHHhhccCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEe-cCCCcchHHHHHHHHHhcCCC
Q 011641 69 STDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEK-STVPVKTAEAIEKILTHNSKG 147 (480)
Q Consensus 69 t~d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~-STv~~gt~~~l~~~l~~~~~g 147 (480)
++|+++++++||+||+|||+.. .....+++++.+.++++++|+.. |++++. .+.+.+....
T Consensus 78 ~~~~~eav~~aDlVieavpe~~-------------~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~---~la~~~~~~~-- 139 (319)
T 2dpo_A 78 CTNLAEAVEGVVHIQECVPENL-------------DLKRKIFAQLDSIVDDRVVLSSSSSCLLPS---KLFTGLAHVK-- 139 (319)
T ss_dssp ECCHHHHTTTEEEEEECCCSCH-------------HHHHHHHHHHHTTCCSSSEEEECCSSCCHH---HHHTTCTTGG--
T ss_pred eCCHHHHHhcCCEEEEeccCCH-------------HHHHHHHHHHHhhCCCCeEEEEeCCChHHH---HHHHhcCCCC--
Confidence 9999998999999999998532 23467788999999999988643 555542 3333232111
Q ss_pred CceEEe---eCCccccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHHH
Q 011641 148 IKFQIL---SNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLA 224 (480)
Q Consensus 148 ~~~~v~---~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~ 224 (480)
. ++. ++|....+ + ..++ .+.. ++++++++++++|+.++. .+++...-.. .++.|-
T Consensus 140 -r-~ig~Hp~~P~~~~~------l---veiv-~g~~--t~~e~~~~~~~l~~~lGk-~~v~v~~~~~----Gfi~Nr--- 197 (319)
T 2dpo_A 140 -Q-CIVAHPVNPPYYIP------L---VELV-PHPE--TSPATVDRTHALMRKIGQ-SPVRVLKEID----GFVLNR--- 197 (319)
T ss_dssp -G-EEEEEECSSTTTCC------E---EEEE-ECTT--CCHHHHHHHHHHHHHTTC-EEEECSSCCT----TTTHHH---
T ss_pred -C-eEEeecCCchhhcc------e---EEEe-CCCC--CCHHHHHHHHHHHHHcCC-EEEEECCCcC----CchHHH---
Confidence 1 122 23332211 1 1244 4432 268999999999999873 4455532222 234442
Q ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHhcCCC
Q 011641 225 QRISSVNAMSALCEATGANVSQVAFAVGTDS 255 (480)
Q Consensus 225 ~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~~ 255 (480)
+..++++|...++++.++|++++.+++....
T Consensus 198 ll~a~~~EA~~l~~~g~~~~~~id~a~~~g~ 228 (319)
T 2dpo_A 198 LQYAIISEAWRLVEEGIVSPSDLDLVMSDGL 228 (319)
T ss_dssp HHHHHHHHHHHHHHTTSSCHHHHHHHHHTTH
T ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHhCC
Confidence 3457899999999999999999999998653
No 48
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.74 E-value=2.6e-16 Score=156.72 Aligned_cols=194 Identities=15% Similarity=0.177 Sum_probs=137.6
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCC--eEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHH-hhc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEK-HVS 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~-a~~ 77 (480)
+|||+|||+|.||.++|..|++. |+ +|++||+++++++.+.+.+. .-..++++++ +++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~--G~~~~V~~~dr~~~~~~~a~~~G~-----------------~~~~~~~~~~~~~~ 93 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS--GFKGKIYGYDINPESISKAVDLGI-----------------IDEGTTSIAKVEDF 93 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHTTS-----------------CSEEESCTTGGGGG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC--CCCCEEEEEECCHHHHHHHHHCCC-----------------cchhcCCHHHHhhc
Confidence 37999999999999999999998 88 99999999998887664210 0145677787 899
Q ss_pred cCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCc
Q 011641 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPE 157 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
+||+||+|||.. .+.++++++.+.++++++|++.+++.+...+.+.+.+.+.. ...+-.++|+
T Consensus 94 ~aDvVilavp~~---------------~~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~~~--v~~hPm~G~e 156 (314)
T 3ggo_A 94 SPDFVMLSSPVR---------------TFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGKRF--VGGHPIAGTE 156 (314)
T ss_dssp CCSEEEECSCGG---------------GHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGGE--ECEEECCCCC
T ss_pred cCCEEEEeCCHH---------------HHHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHHhcCCCE--EecCcccCCc
Confidence 999999999842 24677889999999999999988887766777766664310 0112233445
Q ss_pred cccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCc-hhHHHhhhhHhHHHHHHHHHHHHH
Q 011641 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNL-WSAELSKLAANAFLAQRISSVNAM 233 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~-~~ae~~Kl~~N~~~~~~ia~~nE~ 233 (480)
..++..+..+++....+++.. .+..+++..+.++++|+.++ ..+..++. +....++++...-..+..++++.+
T Consensus 157 ~sG~~~A~~~Lf~g~~~il~~-~~~~~~~~~~~v~~l~~~~G--~~v~~~~~~~hD~~~a~~s~lph~~a~~l~~~~ 230 (314)
T 3ggo_A 157 KSGVEYSLDNLYEGKKVILTP-TKKTDKKRLKLVKRVWEDVG--GVVEYMSPELHDYVFGVVSHLPHAVAFALVDTL 230 (314)
T ss_dssp CCSGGGCCTTTTTTCEEEECC-CTTSCHHHHHHHHHHHHHTT--CEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ccchhhhhhhhhcCCEEEEEe-CCCCCHHHHHHHHHHHHHcC--CEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445556666666655555532 22236889999999999986 35555554 455777777776665555665554
No 49
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.73 E-value=2.6e-17 Score=161.70 Aligned_cols=192 Identities=21% Similarity=0.291 Sum_probs=133.8
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
+||+|||+|.||.+||.+|+ + |++|++||+++++++.+.+. + .++. .++++.++|+++ +++||+
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-a--G~~V~v~d~~~~~~~~~~~~---l----~~~~-----~~~i~~~~~~~~-~~~aDl 76 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-S--KHEVVLQDVSEKALEAAREQ---I----PEEL-----LSKIEFTTTLEK-VKDCDI 76 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T--TSEEEEECSCHHHHHHHHHH---S----CGGG-----GGGEEEESSCTT-GGGCSE
T ss_pred CeEEEEeeCHHHHHHHHHHH-c--CCEEEEEECCHHHHHHHHHH---H----HHHH-----hCCeEEeCCHHH-HcCCCE
Confidence 68999999999999999999 8 99999999999998887653 1 1111 136888899876 899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEE-EecCCCcchHHHHHHHHHhcCC--CCceEEeeCCcc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVV-EKSTVPVKTAEAIEKILTHNSK--GIKFQILSNPEF 158 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi-~~STv~~gt~~~l~~~l~~~~~--g~~~~v~~~Pe~ 158 (480)
||.|||... +++ ..++.++.+. ++++++ +.||+++..... .+..... |.+| ++|..
T Consensus 77 Vieavpe~~-----------~vk--~~l~~~l~~~--~~~IlasntSti~~~~~a~---~~~~~~r~~G~Hf---~~Pv~ 135 (293)
T 1zej_A 77 VMEAVFEDL-----------NTK--VEVLREVERL--TNAPLCSNTSVISVDDIAE---RLDSPSRFLGVHW---MNPPH 135 (293)
T ss_dssp EEECCCSCH-----------HHH--HHHHHHHHTT--CCSCEEECCSSSCHHHHHT---TSSCGGGEEEEEE---CSSTT
T ss_pred EEEcCcCCH-----------HHH--HHHHHHHhcC--CCCEEEEECCCcCHHHHHH---HhhcccceEeEEe---cCccc
Confidence 999998642 222 3455667666 788774 678888764322 1111110 2222 34543
Q ss_pred ccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHHHHHHHHHHHHHHHHH
Q 011641 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCE 238 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~ 238 (480)
..+ + -.++.|.. + ++++++++.++++.+++ .+++..+. |+++|.+ +++++|...+++
T Consensus 136 ~~~------l---veiv~g~~-t--~~~~~~~~~~l~~~lGk-~~v~v~d~------fi~Nrll----~~~~~EA~~l~~ 192 (293)
T 1zej_A 136 VMP------L---VEIVISRF-T--DSKTVAFVEGFLRELGK-EVVVCKGQ------SLVNRFN----AAVLSEASRMIE 192 (293)
T ss_dssp TCC------E---EEEEECTT-C--CHHHHHHHHHHHHHTTC-EEEEEESS------CHHHHHH----HHHHHHHHHHHH
T ss_pred cCC------E---EEEECCCC-C--CHHHHHHHHHHHHHcCC-eEEEeccc------ccHHHHH----HHHHHHHHHHHH
Confidence 321 1 12444432 2 58999999999999873 45555543 6666644 468999999999
Q ss_pred HhCCCHHHHHHHhcCC
Q 011641 239 ATGANVSQVAFAVGTD 254 (480)
Q Consensus 239 ~~Gid~~~v~~~~~~~ 254 (480)
+ |+|++++.+++...
T Consensus 193 ~-Gv~~e~id~~~~~g 207 (293)
T 1zej_A 193 E-GVRAEDVDRVWKHH 207 (293)
T ss_dssp H-TCCHHHHHHHHHTT
T ss_pred h-CCCHHHHHHHHHhc
Confidence 9 88999999999854
No 50
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.72 E-value=1e-16 Score=168.22 Aligned_cols=209 Identities=18% Similarity=0.225 Sum_probs=140.7
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCC----CCCcCCC-hHH-HHhhhcCCCEEEecCHHHh
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQ----LPIYEPG-LDG-VVKQCRGKNLFFSTDVEKH 75 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~----~~~~e~~-l~~-~~~~~~~~~l~~t~d~~~a 75 (480)
+||+|||+|.||.++|..|+++ |++|++||+++++++.+.+.. ....+.+ ++. -... ...++++++|++ +
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~a--G~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~-~~~~i~~~~~~~-~ 81 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASH--GHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCER-TLKRLIPVTDIH-A 81 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHH-HHHTEEEECCGG-G
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHH-HHhceeEeCCHH-H
Confidence 5899999999999999999998 999999999999988765310 0000011 000 0000 013688899986 5
Q ss_pred hccCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEE-EEecCCCcchHHHHHHHHHhcCC--CCceEE
Q 011641 76 VSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIV-VEKSTVPVKTAEAIEKILTHNSK--GIKFQI 152 (480)
Q Consensus 76 ~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iV-i~~STv~~gt~~~l~~~l~~~~~--g~~~~v 152 (480)
+++||+||+|||+. +....++++++.+.+++++++ .+.||+++.. +.+.+..... |.+|
T Consensus 82 ~~~aDlVIeAVpe~-------------~~vk~~v~~~l~~~~~~~~IlasntSti~i~~---ia~~~~~p~~~ig~hf-- 143 (483)
T 3mog_A 82 LAAADLVIEAASER-------------LEVKKALFAQLAEVCPPQTLLTTNTSSISITA---IAAEIKNPERVAGLHF-- 143 (483)
T ss_dssp GGGCSEEEECCCCC-------------HHHHHHHHHHHHHHSCTTCEEEECCSSSCHHH---HTTTSSSGGGEEEEEE--
T ss_pred hcCCCEEEEcCCCc-------------HHHHHHHHHHHHHhhccCcEEEecCCCCCHHH---HHHHccCccceEEeee--
Confidence 89999999999853 223367888999999999988 5678887642 2222211110 1111
Q ss_pred eeCCccccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHHHHHHHHHHH
Q 011641 153 LSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNA 232 (480)
Q Consensus 153 ~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE 232 (480)
++|....+ + ..++++..+ ++++.+.+.++++.+++ .++.+.+.. .|+++|.+. +++||
T Consensus 144 -~~Pa~v~~------L----vevv~g~~T--s~e~~~~~~~l~~~lGk-~~v~v~d~~----Gfi~Nr~l~----~~~~E 201 (483)
T 3mog_A 144 -FNPAPVMK------L----VEVVSGLAT--AAEVVEQLCELTLSWGK-QPVRCHSTP----GFIVNRVAR----PYYSE 201 (483)
T ss_dssp -CSSTTTCC------E----EEEEECSSC--CHHHHHHHHHHHHHTTC-EEEEEESCT----TTTHHHHTH----HHHHH
T ss_pred -cChhhhCC------e----EEEecCCCC--CHHHHHHHHHHHHHhCC-EEEEEeccC----cchHHHHHH----HHHHH
Confidence 33332221 1 234565432 68899999999999874 456665543 266666443 48999
Q ss_pred HHHHHHHhCCCHHHHHHHhcCC
Q 011641 233 MSALCEATGANVSQVAFAVGTD 254 (480)
Q Consensus 233 ~~~l~~~~Gid~~~v~~~~~~~ 254 (480)
...++++.++|++++.+++...
T Consensus 202 a~~l~~~g~~~~~~id~a~~~~ 223 (483)
T 3mog_A 202 AWRALEEQVAAPEVIDAALRDG 223 (483)
T ss_dssp HHHHHHTTCSCHHHHHHHHHHT
T ss_pred HHHHHHhCCCCHHHHHHHHHhc
Confidence 9999999999999999999754
No 51
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.72 E-value=2.5e-16 Score=155.92 Aligned_cols=204 Identities=16% Similarity=0.160 Sum_probs=135.1
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHc------------CCCCCcCC-----ChHHHHhhhcC
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS------------DQLPIYEP-----GLDGVVKQCRG 63 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~------------~~~~~~e~-----~l~~~~~~~~~ 63 (480)
|+||+|||+|.||.++|..|+++ |++|++||+++++++.+.+ |... +. ..+.. .
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~--G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~--~~~~~~~~~~~~-----~ 85 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAAT--GHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAE--NPKAGDEFVEKT-----L 85 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSS--CHHHHHHHHHHH-----H
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCC--ccccchhhHHHH-----H
Confidence 57899999999999999999998 9999999999998876432 1100 00 00000 1
Q ss_pred CCEEEecCHHHhhccCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEE-ecCCCcchHHHHHHHHH
Q 011641 64 KNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVE-KSTVPVKTAEAIEKILT 142 (480)
Q Consensus 64 ~~l~~t~d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~-~STv~~gt~~~l~~~l~ 142 (480)
.++++++|+++++++||+||+|||++. .....+++++.+.++++++|+. .|++++. .+.+.+.
T Consensus 86 ~~i~~~~~~~~~~~~aD~Vi~avp~~~-------------~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~---~l~~~~~ 149 (302)
T 1f0y_A 86 STIATSTDAASVVHSTDLVVEAIVENL-------------KVKNELFKRLDKFAAEHTIFASNTSSLQIT---SIANATT 149 (302)
T ss_dssp HTEEEESCHHHHTTSCSEEEECCCSCH-------------HHHHHHHHHHTTTSCTTCEEEECCSSSCHH---HHHTTSS
T ss_pred hceEEecCHHHhhcCCCEEEEcCcCcH-------------HHHHHHHHHHHhhCCCCeEEEECCCCCCHH---HHHHhcC
Confidence 257889999888999999999998532 2235677889888988888763 4565543 2322221
Q ss_pred hcCCCCceEEe---eCCccccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhH
Q 011641 143 HNSKGIKFQIL---SNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAA 219 (480)
Q Consensus 143 ~~~~g~~~~v~---~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~ 219 (480)
... .+ +. ++|.+..+ ...+ +++.. .+++..+.+.++|+.++. .++...+. . .++++
T Consensus 150 ~~~---~~-~g~h~~~P~~~~~---------~~~i-~~g~~--~~~e~~~~~~~l~~~~G~-~~v~~~~~-~---g~i~n 208 (302)
T 1f0y_A 150 RQD---RF-AGLHFFNPVPVMK---------LVEV-IKTPM--TSQKTFESLVDFSKALGK-HPVSCKDT-P---GFIVN 208 (302)
T ss_dssp CGG---GE-EEEEECSSTTTCC---------EEEE-ECCTT--CCHHHHHHHHHHHHHTTC-EEEEECSC-T---TTTHH
T ss_pred Ccc---cE-EEEecCCCcccCc---------eEEE-eCCCC--CCHHHHHHHHHHHHHcCC-ceEEecCc-c---cccHH
Confidence 110 11 11 23433221 1123 44432 258899999999999863 34444432 1 14444
Q ss_pred hHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCC
Q 011641 220 NAFLAQRISSVNAMSALCEATGANVSQVAFAVGTD 254 (480)
Q Consensus 220 N~~~~~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~ 254 (480)
| +.++++||.+.++++.++|++++..++...
T Consensus 209 r----~l~~~~~Ea~~l~~~g~~~~~~id~~~~~g 239 (302)
T 1f0y_A 209 R----LLVPYLMEAIRLYERGDASKEDIDTAMKLG 239 (302)
T ss_dssp H----HHHHHHHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred H----HHHHHHHHHHHHHHcCCCCHHHHHHHHHhC
Confidence 4 345789999999999999999999988643
No 52
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.71 E-value=1.2e-16 Score=158.88 Aligned_cols=264 Identities=14% Similarity=0.117 Sum_probs=160.2
Q ss_pred CcEEEEECCChhHHHHHHHHHHcC--C-C-CeEEEEECCHHHHHHHHc-CCCCCcCCChHHHHhhhcCCCEEEecCHHHh
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKC--P-S-IEVAVVDISVSRINAWNS-DQLPIYEPGLDGVVKQCRGKNLFFSTDVEKH 75 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~--~-G-~~V~~~D~~~~~v~~l~~-~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a 75 (480)
+|||+|||+|.||.++|..|+++. + | ++|++||+ +++++.+++ .+..+.++..+.. ..++.++++.+ .
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~-----~~~~~~~~~~~-~ 80 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFL-----ARPTCVTDNPA-E 80 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEE-----ECCSEEESCHH-H
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeE-----EecceEecCcc-c
Confidence 379999999999999999999740 0 5 89999999 888999887 4433322111000 01345667765 4
Q ss_pred hccCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEee-
Q 011641 76 VSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILS- 154 (480)
Q Consensus 76 ~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~- 154 (480)
+..+|+||+|||++. +.++++++.+.++++++|+..++ ..+..+.+.+.+.+.. .-..+.+
T Consensus 81 ~~~~D~vil~vk~~~---------------~~~v~~~i~~~l~~~~~iv~~~n-G~~~~~~l~~~l~~~~--v~~g~~~~ 142 (317)
T 2qyt_A 81 VGTVDYILFCTKDYD---------------MERGVAEIRPMIGQNTKILPLLN-GADIAERMRTYLPDTV--VWKGCVYI 142 (317)
T ss_dssp HCCEEEEEECCSSSC---------------HHHHHHHHGGGEEEEEEEEECSC-SSSHHHHHTTTSCTTT--BCEEEEEE
T ss_pred cCCCCEEEEecCccc---------------HHHHHHHHHhhcCCCCEEEEccC-CCCcHHHHHHHCCCCc--EEEEEEEE
Confidence 789999999998642 46788899998888888776543 4555555544443311 0011112
Q ss_pred CCccccccccccccCCCCeEEEecC-CCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHH----------
Q 011641 155 NPEFLAEGTAIQDLFNPDRVLIGGR-ETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFL---------- 223 (480)
Q Consensus 155 ~Pe~~~~G~a~~~~~~~~~vviG~~-~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~---------- 223 (480)
...+..||...+.. ....+++|+. +.. +.+.. .++++|+..+. ...+..++..++|.|++.|+..
T Consensus 143 ~a~~~~pg~~~~~~-~g~~~~ig~~~~~~-~~~~~-~~~~ll~~~g~-~~~~~~di~~~~~~Kl~~N~~~~~~~al~g~~ 218 (317)
T 2qyt_A 143 SARKSAPGLITLEA-DRELFYFGSGLPEQ-TDDEV-RLAELLTAAGI-RAYNPTDIDWYIMKKFMMISVTATATAYFDKP 218 (317)
T ss_dssp EEEEEETTEEEEEE-EEEEEEEECCSSSC-CHHHH-HHHHHHHHTTC-CEECCSCHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred EEEEcCCCEEEEcC-CCceEEEcCCCCCC-cCHHH-HHHHHHHHCCC-CCEEchHHHHHHHHHHHHHHhhHHHHHHHCCC
Confidence 22233455433221 1122336753 221 24556 88999998753 3455679999999999999853
Q ss_pred ---------HHHHHHHHHHHHHHHHhCCCHH--HHHHHhcC----CCCCCCCCc---cCCCCccccchhHhHHHHHHHHH
Q 011641 224 ---------AQRISSVNAMSALCEATGANVS--QVAFAVGT----DSRIGPKFL---NASVGFGGSCFQKDILNLVYICE 285 (480)
Q Consensus 224 ---------~~~ia~~nE~~~l~~~~Gid~~--~v~~~~~~----~~~~~~~~~---~pg~g~gG~cl~kD~~~l~~~a~ 285 (480)
.+..+.++|+..+++++|+++. .+.+.+.. .++..+.++ .+|...-..- ...++.++|+
T Consensus 219 ~g~~~~~~~~~~~~~~~E~~~v~~a~G~~~~~~~~~~~~~~~~~~~~~~~~sm~~d~~~g~~~E~~~---~~g~~~~~a~ 295 (317)
T 2qyt_A 219 IGSILTEHEPELLSLLEEVAELFRAKYGQVPDDVVQQLLDKQRKMPPESTSSMHSDFLQGGSTEVET---LTGYVVREAE 295 (317)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHHTSCCCSSHHHHHHHHHHHC--------------------CT---TTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHhccCCCCCChHHHHHHcCCccCHHH---HhhHHHHHHH
Confidence 5677899999999999999863 34443322 111111111 1221111112 2568889999
Q ss_pred HCCCChhhHHHHH
Q 011641 286 CNGLPEVAEYWKQ 298 (480)
Q Consensus 286 ~~g~~~~~~~~~~ 298 (480)
++|++ .++.+.
T Consensus 296 ~~gv~--~P~~~~ 306 (317)
T 2qyt_A 296 ALRVD--LPMYKR 306 (317)
T ss_dssp HTTCC--CHHHHH
T ss_pred HcCCC--CCHHHH
Confidence 99998 555443
No 53
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.71 E-value=2.1e-17 Score=162.03 Aligned_cols=253 Identities=15% Similarity=0.130 Sum_probs=158.5
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|.||.++|..|+++ |++|++||+++++++.++.... .+. .+ ...+. +++. ++++++|+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~r~~~~~~~l~~~~~----~~~-~~-----~~~~~-~~~~-~~~~~~d~ 66 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQ--GHEVQGWLRVPQPYCSVNLVET----DGS-IF-----NESLT-ANDP-DFLATSDL 66 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCSEEEEEEECT----TSC-EE-----EEEEE-ESCH-HHHHTCSE
T ss_pred CeEEEECcCHHHHHHHHHHHhC--CCCEEEEEcCccceeeEEEEcC----CCc-ee-----eeeee-ecCc-cccCCCCE
Confidence 7999999999999999999998 9999999999876554432110 000 00 00122 3444 45789999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCc--eEEeeCCccc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIK--FQILSNPEFL 159 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~--~~v~~~Pe~~ 159 (480)
||+|||++ .+.++++++.+.++++++|+..++ ..++.+.+.+.+.+...+.. .....+| .
T Consensus 67 vi~~v~~~---------------~~~~v~~~l~~~l~~~~~vv~~~~-g~~~~~~l~~~~~~~~~g~~~~~~~~~~p-~- 128 (291)
T 1ks9_A 67 LLVTLKAW---------------QVSDAVKSLASTLPVTTPILLIHN-GMGTIEELQNIQQPLLMGTTTHAARRDGN-V- 128 (291)
T ss_dssp EEECSCGG---------------GHHHHHHHHHTTSCTTSCEEEECS-SSCTTGGGTTCCSCEEEEEECCEEEEETT-E-
T ss_pred EEEEecHH---------------hHHHHHHHHHhhCCCCCEEEEecC-CCCcHHHHHHhcCCeEEEEEeEccEEcCC-E-
Confidence 99999853 147788999999998888876643 44554444433322000000 0012344 2
Q ss_pred cccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHH----------------
Q 011641 160 AEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFL---------------- 223 (480)
Q Consensus 160 ~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~---------------- 223 (480)
.. ..... ++.+|.... +++..+.++++|+..+. ...+..++..+.+.|++.|+..
T Consensus 129 ----~~-~~~~g-~~~i~~~~~--~~~~~~~~~~ll~~~g~-~~~~~~~~~~~~~~Kl~~n~~~n~~tal~~~~~g~~~~ 199 (291)
T 1ks9_A 129 ----II-HVANG-ITHIGPARQ--QDGDYSYLADILQTVLP-DVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRH 199 (291)
T ss_dssp ----EE-EEECC-CEEEEESSG--GGTTCTHHHHHHHTTSS-CEEECTTHHHHHHHHHHHHHHHHHHHHHTTCCGGGGGG
T ss_pred ----EE-Eeccc-ceEEccCCC--CcchHHHHHHHHHhcCC-CCeecHHHHHHHHHHHeeeeeecHHHHHHCCCchHHHh
Confidence 11 11122 244554211 34567788999998763 3456679999999999999877
Q ss_pred --HHHHHHHHHHHHHHHHhCCCH--HHH----HHHhcCCC-CCCCCCccCCCCccccchhHhHHHHHHHHHHCCCChhhH
Q 011641 224 --AQRISSVNAMSALCEATGANV--SQV----AFAVGTDS-RIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAE 294 (480)
Q Consensus 224 --~~~ia~~nE~~~l~~~~Gid~--~~v----~~~~~~~~-~~~~~~~~pg~g~gG~cl~kD~~~l~~~a~~~g~~~~~~ 294 (480)
.+..+.++|+..+++++|++. .++ .+.+...+ ..++++.....|..- -+..+..++.+.++++|++ .+
T Consensus 200 ~~~~~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~~~~~~~~ssm~~d~~~g~~~-e~~~~~g~~~~~a~~~gv~--~P 276 (291)
T 1ks9_A 200 HPQEIMQICEEVAAVIEREGHHTSAEDLRDYVMQVIDATAENISSMLQDIRALRHT-EIDYINGFLLRRARAHGIA--VP 276 (291)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHTTTCCCHHHHHHHTTCCC-SGGGTHHHHHHHHHHHTCC--CH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCCCCChHHHHHHcCCcc-HHHHHHHHHHHHHHHhCCC--CC
Confidence 788899999999999999986 444 33333221 111111111112111 2336778899999999998 55
Q ss_pred HHHH
Q 011641 295 YWKQ 298 (480)
Q Consensus 295 ~~~~ 298 (480)
+.+.
T Consensus 277 ~~~~ 280 (291)
T 1ks9_A 277 ENTR 280 (291)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5444
No 54
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.71 E-value=1.8e-16 Score=164.37 Aligned_cols=202 Identities=19% Similarity=0.235 Sum_probs=136.4
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHH--------HH-HcCCCCCcCCChHHHHhhhcCCCEEEecC
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRIN--------AW-NSDQLPIYEPGLDGVVKQCRGKNLFFSTD 71 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~--------~l-~~~~~~~~e~~l~~~~~~~~~~~l~~t~d 71 (480)
|+||+|||+|.||.+||..|+++ |++|++||+++++.. .+ .+|... +...+.. ..++++++|
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~a--G~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~--~~~~~~~-----~~~i~~t~d 124 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLA--GIETFLVVRNEQRCKQELEVMYAREKSFKRLN--DKRIEKI-----NANLKITSD 124 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHHHHHHHTTSCC--HHHHHHH-----HTTEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCeEEEEECcHHHHHHHHHHHHHHHHHcCCCC--HHHHHHH-----hcceEEeCC
Confidence 57999999999999999999998 999999999998432 11 222111 0001111 146889999
Q ss_pred HHHhhccCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEE-EecCCCcchHHHHHHHHHhcCC--CC
Q 011641 72 VEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVV-EKSTVPVKTAEAIEKILTHNSK--GI 148 (480)
Q Consensus 72 ~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi-~~STv~~gt~~~l~~~l~~~~~--g~ 148 (480)
++ ++++||+||+|||+. +.....+++++.+.+++++||+ +.||+++.. +.+.+..... |.
T Consensus 125 l~-al~~aDlVIeAVpe~-------------~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~~---ia~~~~~p~r~iG~ 187 (460)
T 3k6j_A 125 FH-KLSNCDLIVESVIED-------------MKLKKELFANLENICKSTCIFGTNTSSLDLNE---ISSVLRDPSNLVGI 187 (460)
T ss_dssp GG-GCTTCSEEEECCCSC-------------HHHHHHHHHHHHTTSCTTCEEEECCSSSCHHH---HHTTSSSGGGEEEE
T ss_pred HH-HHccCCEEEEcCCCC-------------HHHHHHHHHHHHhhCCCCCEEEecCCChhHHH---HHHhccCCcceEEE
Confidence 86 589999999999853 2234677889999999999885 557777532 3222211100 11
Q ss_pred ceEEeeCCccccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHHHHHHH
Q 011641 149 KFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRIS 228 (480)
Q Consensus 149 ~~~v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia 228 (480)
+| ++|....+ + ..|+.|.. +++++++.+.++++.+++ .++.+.+. .+++.| .+.++
T Consensus 188 Hf---fnPv~~m~------L---vEIv~g~~---Ts~e~~~~~~~l~~~lGk-~~v~v~d~-----pGfi~N---ril~~ 243 (460)
T 3k6j_A 188 HF---FNPANVIR------L---VEIIYGSH---TSSQAIATAFQACESIKK-LPVLVGNC-----KSFVFN---RLLHV 243 (460)
T ss_dssp EC---CSSTTTCC------E---EEEECCSS---CCHHHHHHHHHHHHHTTC-EEEEESSC-----CHHHHH---HHHHH
T ss_pred Ee---cchhhhCC------E---EEEEeCCC---CCHHHHHHHHHHHHHhCC-EEEEEecc-----cHHHHH---HHHHH
Confidence 11 34443221 1 12444432 268999999999999874 55666542 234555 34457
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHhc
Q 011641 229 SVNAMSALCEATGANVSQVAFAVG 252 (480)
Q Consensus 229 ~~nE~~~l~~~~Gid~~~v~~~~~ 252 (480)
+++|+..++++.|+|++++.+++.
T Consensus 244 ~~~EA~~l~~~~Ga~~e~ID~a~~ 267 (460)
T 3k6j_A 244 YFDQSQKLMYEYGYLPHQIDKIIT 267 (460)
T ss_dssp HHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHH
Confidence 899999999999999999999986
No 55
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=99.70 E-value=1.9e-16 Score=160.05 Aligned_cols=293 Identities=18% Similarity=0.193 Sum_probs=175.6
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcC-CCCCcCCChHHHHhhhcCCCE-EEecCHHHhhccC
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSD-QLPIYEPGLDGVVKQCRGKNL-FFSTDVEKHVSEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~-~~~~~e~~l~~~~~~~~~~~l-~~t~d~~~a~~~a 79 (480)
|||+|||+|.||..+|..|+++ |++|++||+++++++.+++. ...+.+.+.+. ..++ .++++++++++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 76 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK--GQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAG------TAHPDLLTSDIGLAVKDA 76 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHTSEEEESSSCCE------EECCSEEESCHHHHHTTC
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHhcCCeEEecccccc------ccccceecCCHHHHHhcC
Confidence 7899999999999999999998 99999999999999988753 22221111100 0123 4678888888999
Q ss_pred cEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCC-CCceE-EeeCCc
Q 011641 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSK-GIKFQ-ILSNPE 157 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~-g~~~~-v~~~Pe 157 (480)
|+||+|||++. ..++++++.+.++++++|+...++.+++.+ +.+.+.+.+. ...|. +..+|.
T Consensus 77 D~vi~~v~~~~---------------~~~~~~~l~~~l~~~~~vv~~~~~~~~~~~-~~~~l~~~~~~~v~~~~~~~~~~ 140 (359)
T 1bg6_A 77 DVILIVVPAIH---------------HASIAANIASYISEGQLIILNPGATGGALE-FRKILRENGAPEVTIGETSSMLF 140 (359)
T ss_dssp SEEEECSCGGG---------------HHHHHHHHGGGCCTTCEEEESSCCSSHHHH-HHHHHHHTTCCCCEEEEESSCSE
T ss_pred CEEEEeCCchH---------------HHHHHHHHHHhCCCCCEEEEcCCCchHHHH-HHHHHHhcCCCCeEEEEecCCcE
Confidence 99999998642 367788999999999988776443344433 4555555321 11111 123554
Q ss_pred cc---cccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhh----------------
Q 011641 158 FL---AEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLA---------------- 218 (480)
Q Consensus 158 ~~---~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~---------------- 218 (480)
.. .||... .+....++.+|......+++..+.++++|..+. ...++ |.|++
T Consensus 141 ~~~~~gpg~v~-~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~-----~~~di----~~k~~~nvn~~~n~~~al~~~ 210 (359)
T 1bg6_A 141 TCRSERPGQVT-VNAIKGAMDFACLPAAKAGWALEQIGSVLPQYV-----AVENV----LHTSLTNVNAVMHPLPTLLNA 210 (359)
T ss_dssp EEECSSTTEEE-EEEECSCEEEEEESGGGHHHHHHHHTTTCTTEE-----ECSCH----HHHHHCCHHHHHTHHHHHTTH
T ss_pred EEEeCCCCEEE-EEEeecceEEEeccccccHHHHHHHHHHhhhcE-----EcCCh----HhhhccCCCccccHHHHHhhh
Confidence 32 355432 111123456665322224556777777775431 11221 12211
Q ss_pred ----------------HhHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCCC---C-------CCCCcc--CCC-Ccc
Q 011641 219 ----------------ANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSR---I-------GPKFLN--ASV-GFG 269 (480)
Q Consensus 219 ----------------~N~~~~~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~~~---~-------~~~~~~--pg~-g~g 269 (480)
.|..+.+..+.++|+..+++++|++..++.+.+..... . .+.++. .++ .+-
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~sm~~d~~~~~e~~ 290 (359)
T 1bg6_A 211 ARCESGTPFQYYLEGITPSVGSLAEKVDAERIAIAKAFDLNVPSVCEWYKESYGQSPATIYEAVQGNPAYRGIAGPINLN 290 (359)
T ss_dssp HHHHTTCCCBHHHHHCCHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHC-------CCSHHHHHHTCGGGTTCBCCSSSC
T ss_pred chhhcCCccchhhcCCCHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHhCCCcccHHHHHhcchhhcCCCCCCCCC
Confidence 22345777889999999999999998666666543210 0 011111 111 133
Q ss_pred ccchhHhH----HHHHHHHHHCCCChhhHHHHHHHHHhHHhHHHHHHHHHHHhcCcC--CCCeEEEEeeccCCCCCccc
Q 011641 270 GSCFQKDI----LNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVASMFNTV--SNKKIAVLGFAFKKDTGDTR 342 (480)
Q Consensus 270 G~cl~kD~----~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~--~~~~v~ilGla~K~~~~d~r 342 (480)
+.-+.||+ .++++.|+++|++ .++.+.+.+. +.....+.. .++++..+|++ +.+++|+|
T Consensus 291 ~~~~~~D~~~~~g~~~~~a~~~gv~--~P~~~~l~~~-----------~~~~~~~~~~~~g~~~~~lgl~-~~~~~~~~ 355 (359)
T 1bg6_A 291 TRYFFEDVSTGLVPLSELGRAVNVP--TPLIDAVLDL-----------ISSLIDTDFRKEGRTLEKLGLS-GLTAAGIR 355 (359)
T ss_dssp CHHHHHHHHTTHHHHHHHHHHTTCC--CHHHHHHHHH-----------HHHHTTCCHHHHSCCTTTTTCT-TCCHHHHH
T ss_pred ccceecCcCccHHHHHHHHHHcCCC--chHHHHHHHH-----------HHHHHCCChhhcCCCHHhcCCC-CCCHHHHH
Confidence 33677887 6889999999998 5555543321 111111111 36678888998 77777765
No 56
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.69 E-value=2.1e-15 Score=147.92 Aligned_cols=207 Identities=14% Similarity=0.169 Sum_probs=139.0
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCC-----------CCCcCCChHHHHhhhcCCCEEEec
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQ-----------LPIYEPGLDGVVKQCRGKNLFFST 70 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~-----------~~~~e~~l~~~~~~~~~~~l~~t~ 70 (480)
+||+|||+|.||.++|..|+++ |++|++||+++++++.+.+.. ..+.....+... .+++.++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~-----~~i~~~~ 77 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH--GFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKAL-----GGIRYSD 77 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHH-----HHCEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHH-----cCeEEeC
Confidence 5899999999999999999998 999999999999888766420 001111111111 2467889
Q ss_pred CHHHhhccCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEE-EecCCCcchHHHHHHHHHhcCC--C
Q 011641 71 DVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVV-EKSTVPVKTAEAIEKILTHNSK--G 147 (480)
Q Consensus 71 d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi-~~STv~~gt~~~l~~~l~~~~~--g 147 (480)
++++++++||+||+|||.. ......+++++.+.++++++++ +.|++++ ..+.+.+..... +
T Consensus 78 ~~~~~~~~aDlVi~av~~~-------------~~~~~~v~~~l~~~~~~~~il~s~tS~~~~---~~la~~~~~~~~~ig 141 (283)
T 4e12_A 78 DLAQAVKDADLVIEAVPES-------------LDLKRDIYTKLGELAPAKTIFATNSSTLLP---SDLVGYTGRGDKFLA 141 (283)
T ss_dssp CHHHHTTTCSEEEECCCSC-------------HHHHHHHHHHHHHHSCTTCEEEECCSSSCH---HHHHHHHSCGGGEEE
T ss_pred CHHHHhccCCEEEEeccCc-------------HHHHHHHHHHHHhhCCCCcEEEECCCCCCH---HHHHhhcCCCcceEE
Confidence 9998899999999999853 2234677889999999999887 4456653 344444432211 1
Q ss_pred CceEEeeCCccccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHHHHHH
Q 011641 148 IKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRI 227 (480)
Q Consensus 148 ~~~~v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~i 227 (480)
.+| ++|....+. ..++++.. +++++.+.++++++.++. .++.+.... -.++.|- +..
T Consensus 142 ~h~---~~p~~~~~l----------vevv~~~~--t~~~~~~~~~~l~~~~g~-~~v~v~~~~----~g~i~nr---~~~ 198 (283)
T 4e12_A 142 LHF---ANHVWVNNT----------AEVMGTTK--TDPEVYQQVVEFASAIGM-VPIELKKEK----AGYVLNS---LLV 198 (283)
T ss_dssp EEE---CSSTTTSCE----------EEEEECTT--SCHHHHHHHHHHHHHTTC-EEEECSSCC----TTTTHHH---HHH
T ss_pred Ecc---CCCcccCce----------EEEEeCCC--CCHHHHHHHHHHHHHcCC-EEEEEecCC----CCEEehH---HHH
Confidence 111 234332221 12344432 268899999999999873 445442211 1234452 335
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHhcCC
Q 011641 228 SSVNAMSALCEATGANVSQVAFAVGTD 254 (480)
Q Consensus 228 a~~nE~~~l~~~~Gid~~~v~~~~~~~ 254 (480)
++++|...++++.++|++++.+++...
T Consensus 199 ~~~~ea~~l~~~g~~~~~~id~~~~~~ 225 (283)
T 4e12_A 199 PLLDAAAELLVDGIADPETIDKTWRIG 225 (283)
T ss_dssp HHHHHHHHHHHTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHhc
Confidence 789999999999999999999998753
No 57
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=99.69 E-value=2.5e-16 Score=159.86 Aligned_cols=210 Identities=16% Similarity=0.147 Sum_probs=152.2
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCC--------eEEEEECCHH-----HHHHHHcC-CCCCcCCChHHHHhhhcCCCEE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSI--------EVAVVDISVS-----RINAWNSD-QLPIYEPGLDGVVKQCRGKNLF 67 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~--------~V~~~D~~~~-----~v~~l~~~-~~~~~e~~l~~~~~~~~~~~l~ 67 (480)
.||+|||+|.||+++|..|+++ || +|.+|.++++ .++.+++. .++-|.|++. ...+++
T Consensus 35 ~KI~ViGaGsWGTALA~~la~n--g~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~------Lp~~i~ 106 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAEN--CKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGIT------LPDNLV 106 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH--HHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCC------CCSSEE
T ss_pred CeEEEECcCHHHHHHHHHHHHc--CCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCc------CCCCcE
Confidence 3899999999999999999987 54 5999998865 46777764 4566666652 245799
Q ss_pred EecCHHHhhccCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCC-Ccch--HHHHHHHHHhc
Q 011641 68 FSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTV-PVKT--AEAIEKILTHN 144 (480)
Q Consensus 68 ~t~d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv-~~gt--~~~l~~~l~~~ 144 (480)
+++|++++++++|+||++||+. +++++++++.++++++.++|..+.. .+++ .+.+.+.+.+.
T Consensus 107 ~t~dl~~al~~ad~ii~avPs~---------------~~r~~l~~l~~~~~~~~~iv~~~KGie~~~~~~~~~se~i~e~ 171 (391)
T 4fgw_A 107 ANPDLIDSVKDVDIIVFNIPHQ---------------FLPRICSQLKGHVDSHVRAISCLKGFEVGAKGVQLLSSYITEE 171 (391)
T ss_dssp EESCHHHHHTTCSEEEECSCGG---------------GHHHHHHHHTTTSCTTCEEEECCCSCEEETTEEECHHHHHHHH
T ss_pred EeCCHHHHHhcCCEEEEECChh---------------hhHHHHHHhccccCCCceeEEeccccccccccchhHHHHHHHH
Confidence 9999999999999999999963 4788999999999999988877653 3333 23455555554
Q ss_pred CCCCceEEeeCCccccccccccccCCCCeEEEecCCCcc-----hHHHHHHHHHHHhccCCCCeEEeCCchhHHHh----
Q 011641 145 SKGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPE-----GQKAVKALKDVYAHWVPEDRILTTNLWSAELS---- 215 (480)
Q Consensus 145 ~~g~~~~v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~-----~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~---- 215 (480)
. +..+.++++|.+..+-.. ..|+.+++++.+... ++...+.++++|..-. ..++...|+...|+.
T Consensus 172 ~-~~~~~vLsGPs~A~EVa~----~~pta~~iA~~~~~~~~~~~~~~~a~~~~~lf~~~~-frvy~s~DviGvElgGAlK 245 (391)
T 4fgw_A 172 L-GIQCGALSGANIATEVAQ----EHWSETTVAYHIPKDFRGEGKDVDHKVLKALFHRPY-FHVSVIEDVAGISICGALK 245 (391)
T ss_dssp H-CCEEEEEECSCCHHHHHT----TCCEEEEEECCCCTTCCCSSSSCCHHHHHHHHCBTT-EEEEEESCHHHHHHHHHHH
T ss_pred h-CccceeccCCchHHHhhc----CCCceEEEEecChhhhhhhhHHHHHHHHHHHhCCCC-EEEEEeCCccceehHHHHH
Confidence 3 246778899998765321 345567788753211 1123467888887632 123444687777764
Q ss_pred -------------hhhHhHHHHHHHHHHHHHHHHHHHh
Q 011641 216 -------------KLAANAFLAQRISSVNAMSALCEAT 240 (480)
Q Consensus 216 -------------Kl~~N~~~~~~ia~~nE~~~l~~~~ 240 (480)
++-.|+..++....++||.+|+..+
T Consensus 246 NViAIAaGi~dGlg~G~NakAALitrGl~Em~rlg~al 283 (391)
T 4fgw_A 246 NVVALGCGFVEGLGWGNNASAAIQRVGLGEIIRFGQMF 283 (391)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4557778888889999999999998
No 58
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.67 E-value=2.9e-15 Score=147.18 Aligned_cols=173 Identities=17% Similarity=0.181 Sum_probs=121.5
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||+|||+|+||.++|..|+++++|++|++||+++++++.+.+... ....+++++++++++|
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~-----------------~~~~~~~~~~~~~~aD 68 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGI-----------------VDEATADFKVFAALAD 68 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTS-----------------CSEEESCTTTTGGGCS
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCC-----------------cccccCCHHHhhcCCC
Confidence 48999999999999999999987445899999999999888764210 0145667777789999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhh-CCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCC---
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADV-SKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNP--- 156 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~-l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~P--- 156 (480)
+||+|||.+ .+.++++++.+. ++++++|++.|++.++.++.+.+.+.+.. ..| +..+|
T Consensus 69 vVilavp~~---------------~~~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~--~~~-v~~~P~~g 130 (290)
T 3b1f_A 69 VIILAVPIK---------------KTIDFIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKP--VQF-VGSHPMAG 130 (290)
T ss_dssp EEEECSCHH---------------HHHHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSS--CEE-EEEEEC--
T ss_pred EEEEcCCHH---------------HHHHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccC--CEE-EEeCCcCC
Confidence 999999842 246788889888 88899999888887777777777765411 222 33334
Q ss_pred -ccccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchh
Q 011641 157 -EFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWS 211 (480)
Q Consensus 157 -e~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ 211 (480)
+...++.+..+++....+++... ...+++..+.++++|+.++ ..++.++.+.
T Consensus 131 ~~~~g~~~a~~~l~~g~~~~~~~~-~~~~~~~~~~v~~l~~~~G--~~~~~~~~~~ 183 (290)
T 3b1f_A 131 SHKSGAVAANVNLFENAYYIFSPS-CLTKPNTIPALQDLLSGLH--ARYVEIDAAE 183 (290)
T ss_dssp ---CCTTSCCTTTTTTSEEEEEEC-TTCCTTHHHHHHHHTGGGC--CEEEECCHHH
T ss_pred CCcchHHHhhHHHhCCCeEEEecC-CCCCHHHHHHHHHHHHHcC--CEEEEcCHHH
Confidence 44466666555666555544421 1124678899999999985 3555555544
No 59
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=99.67 E-value=1.4e-15 Score=152.87 Aligned_cols=257 Identities=19% Similarity=0.219 Sum_probs=164.6
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+|||+|||+|.||+.+|..|+++ |++|++||++ ++++.+++.+..+..++.+. ..++++++++++ +.++|
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~--g~~V~~~~r~-~~~~~~~~~g~~~~~~~~~~------~~~~~~~~~~~~-~~~~D 72 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALA--GEAINVLARG-ATLQALQTAGLRLTEDGATH------TLPVRATHDAAA-LGEQD 72 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHT--TCCEEEECCH-HHHHHHHHTCEEEEETTEEE------EECCEEESCHHH-HCCCS
T ss_pred CCEEEEECcCHHHHHHHHHHHHC--CCEEEEEECh-HHHHHHHHCCCEEecCCCeE------EEeeeEECCHHH-cCCCC
Confidence 48999999999999999999998 9999999996 67888876443332222110 113567788876 68999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCC-C-----------------cchHHHHHHHHH
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTV-P-----------------VKTAEAIEKILT 142 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv-~-----------------~gt~~~l~~~l~ 142 (480)
+||+|||++ .++++++++.+.++++++|+..+.. + .+..+.+.+.+.
T Consensus 73 ~Vilavk~~---------------~~~~~~~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~ 137 (335)
T 3ghy_A 73 VVIVAVKAP---------------ALESVAAGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIP 137 (335)
T ss_dssp EEEECCCHH---------------HHHHHHGGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSC
T ss_pred EEEEeCCch---------------hHHHHHHHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcC
Confidence 999999853 3577888899999889887754332 2 233344555543
Q ss_pred hcCCCCceEEee-CCccccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhH
Q 011641 143 HNSKGIKFQILS-NPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANA 221 (480)
Q Consensus 143 ~~~~g~~~~v~~-~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~ 221 (480)
... .-..+.+ +-.+..||.+.+.. ..++.+|..+.. ..+..+.++++|+..+ .......|+....|.|++.|+
T Consensus 138 ~~~--v~~gv~~~~a~~~~pg~v~~~~--~g~~~iG~~~~~-~~~~~~~l~~~l~~~g-~~~~~~~di~~~~w~Kl~~na 211 (335)
T 3ghy_A 138 TRH--VLGCVVHLTCATVSPGHIRHGN--GRRLILGEPAGG-ASPRLASIAALFGRAG-LQAECSEAIQRDIWFKLWGNM 211 (335)
T ss_dssp GGG--EEEEEECCCEEESSTTEEEECS--CCEEEEECTTCS-CCHHHHHHHHHHHHTT-CEEEECSCHHHHHHHHHHTTT
T ss_pred ccc--EEEEEEEEEEEEcCCcEEEECC--CCeEEEecCCCC-cCHHHHHHHHHHHhCC-CCcEeCchHHHHHHHHHHHHh
Confidence 321 0011222 22345666664432 246778864322 2356788888998764 234455799999999977654
Q ss_pred ---------------------HHHHHHHHHHHHHHHHHHhCCCH----HHHHHHhcCCCCCCCCCccCCCCcccc-chhH
Q 011641 222 ---------------------FLAQRISSVNAMSALCEATGANV----SQVAFAVGTDSRIGPKFLNASVGFGGS-CFQK 275 (480)
Q Consensus 222 ---------------------~~~~~ia~~nE~~~l~~~~Gid~----~~v~~~~~~~~~~~~~~~~pg~g~gG~-cl~k 275 (480)
.+++....++|+..+++++|+++ .++++.....+...+.+++ .. --|. -..-
T Consensus 212 ~~N~l~al~~~~~g~~~~~~~~~~l~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~~~~~~sSM~q-D~-~~gr~~tEi 289 (335)
T 3ghy_A 212 TMNPVSVLTGATCDRILDDPLVSAFCLAVMAEAKAIGARIGCPIEQSGEARSAVTRQLGAFKTSMLQ-DA-EAGRGPLEI 289 (335)
T ss_dssp THHHHHHHHCCCHHHHHHSHHHHHHHHHHHHHHHHHHHTTTCCCCSCHHHHHHHHHTTCSCCCTTTC-------CCCCCH
T ss_pred hhhHHHHHhCCChHHHhcChHHHHHHHHHHHHHHHHHHHcCCCCCccHHHHHHHHhccCCCCcHHHH-HH-HcCCCCchH
Confidence 46788899999999999999764 4455544432221111211 00 1122 2233
Q ss_pred h--HHHHHHHHHHCCCC
Q 011641 276 D--ILNLVYICECNGLP 290 (480)
Q Consensus 276 D--~~~l~~~a~~~g~~ 290 (480)
| ..++++.|+++|++
T Consensus 290 d~i~G~vv~~a~~~gv~ 306 (335)
T 3ghy_A 290 DALVASVREIGLHVGVP 306 (335)
T ss_dssp HHHTHHHHHHHHHHTCC
T ss_pred HHHhhHHHHHHHHhCCC
Confidence 3 24788999999998
No 60
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.67 E-value=7.5e-16 Score=169.26 Aligned_cols=207 Identities=17% Similarity=0.174 Sum_probs=137.5
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCC----CCCcCCC-hHHHHhhhcCCCEEEecCHHHh
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQ----LPIYEPG-LDGVVKQCRGKNLFFSTDVEKH 75 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~----~~~~e~~-l~~~~~~~~~~~l~~t~d~~~a 75 (480)
|+||+|||+|.||.++|.+|+++ ||+|++||++++.++..++.. ....+.+ +...-.....+++++++|+ ++
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~a--G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~ 388 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILS--NYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-ES 388 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTT--TCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-GG
T ss_pred CcEEEEEcCCHhhHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-HH
Confidence 57899999999999999999998 999999999999887653210 0000000 0000000112568899998 46
Q ss_pred hccCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEE-EecCCCcchHHHHHHHHHhcCC--CCceEE
Q 011641 76 VSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVV-EKSTVPVKTAEAIEKILTHNSK--GIKFQI 152 (480)
Q Consensus 76 ~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi-~~STv~~gt~~~l~~~l~~~~~--g~~~~v 152 (480)
+++||+||+|||++. ...+.+++++.++++++++|+ ++||+++.. +.+.+..... |.+|
T Consensus 389 ~~~aDlVIeaVpe~~-------------~vk~~v~~~l~~~~~~~~IlasntStl~i~~---la~~~~~p~~~iG~hf-- 450 (725)
T 2wtb_A 389 FRDVDMVIEAVIENI-------------SLKQQIFADLEKYCPQHCILASNTSTIDLNK---IGERTKSQDRIVGAHF-- 450 (725)
T ss_dssp GTTCSEEEECCCSCH-------------HHHHHHHHHHHHHSCTTCEEEECCSSSCHHH---HTTTCSCTTTEEEEEE--
T ss_pred HCCCCEEEEcCcCCH-------------HHHHHHHHHHHhhCCCCcEEEeCCCCCCHHH---HHHHhcCCCCEEEecC--
Confidence 899999999998642 223567788999999999885 456776643 2222211110 1121
Q ss_pred eeCCccccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHHHHHHHHHHH
Q 011641 153 LSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNA 232 (480)
Q Consensus 153 ~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE 232 (480)
++|.+..+ ...|+.|.. + ++++++.+.++++.+++ .++++.+. .+++.| .+.++++||
T Consensus 451 -~~P~~~~~---------lvevv~g~~-t--~~e~~~~~~~l~~~lGk-~~v~v~d~-----~Gfi~N---ril~~~~~E 508 (725)
T 2wtb_A 451 -FSPAHIMP---------LLEIVRTNH-T--SAQVIVDLLDVGKKIKK-TPVVVGNC-----TGFAVN---RMFFPYTQA 508 (725)
T ss_dssp -CSSTTTCC---------EEEEEECSS-C--CHHHHHHHHHHHHHTTC-EEEEEESS-----TTTTHH---HHHHHHHHH
T ss_pred -CCCcccCc---------eEEEEECCC-C--CHHHHHHHHHHHHHhCC-EEEEECCC-----ccHHHH---HHHHHHHHH
Confidence 35554322 112444432 2 58999999999999873 45666543 456677 344678999
Q ss_pred HHHHHHHhCCCHHHHHHHh
Q 011641 233 MSALCEATGANVSQVAFAV 251 (480)
Q Consensus 233 ~~~l~~~~Gid~~~v~~~~ 251 (480)
+..++++ |+|++++.+++
T Consensus 509 a~~l~~~-G~~~e~id~~~ 526 (725)
T 2wtb_A 509 AMFLVEC-GADPYLIDRAI 526 (725)
T ss_dssp HHHHHHT-TCCHHHHHHHH
T ss_pred HHHHHHC-CCCHHHHHHHH
Confidence 9999998 99999999998
No 61
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.67 E-value=7.8e-16 Score=169.00 Aligned_cols=203 Identities=17% Similarity=0.214 Sum_probs=136.0
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhh---------hcCCCEEEecC
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ---------CRGKNLFFSTD 71 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~---------~~~~~l~~t~d 71 (480)
+|||+|||+|.||.++|.+|+++ |++|++||+++++++...+.. +..++.+++. ...+++++++|
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~a--G~~V~l~D~~~~~~~~~~~~i----~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d 387 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASK--GTPILMKDINEHGIEQGLAEA----AKLLVGRVDKGRMTPAKMAEVLNGIRPTLS 387 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHH----HHHHHHHHTTTSSCHHHHHHHHHHEEEESS
T ss_pred CCEEEEECCChhhHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHH----HHHHHHHHhcCCCCHHHHHHHhcCeEEECC
Confidence 47899999999999999999998 999999999999887632100 0001111110 00124788888
Q ss_pred HHHhhccCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEE-EecCCCcchHHHHHHHHHhcCC--CC
Q 011641 72 VEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVV-EKSTVPVKTAEAIEKILTHNSK--GI 148 (480)
Q Consensus 72 ~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi-~~STv~~gt~~~l~~~l~~~~~--g~ 148 (480)
+ +++++||+||+|||++. .....+++++.+.++++++|+ ++||+++.. +.+.+..... |.
T Consensus 388 ~-~~~~~aDlVIeaV~e~~-------------~vk~~v~~~l~~~~~~~~IlasntStl~i~~---la~~~~~~~~~ig~ 450 (715)
T 1wdk_A 388 Y-GDFGNVDLVVEAVVENP-------------KVKQAVLAEVENHVREDAILASNTSTISISL---LAKALKRPENFVGM 450 (715)
T ss_dssp S-TTGGGCSEEEECCCSCH-------------HHHHHHHHHHHTTSCTTCEEEECCSSSCHHH---HGGGCSCGGGEEEE
T ss_pred H-HHHCCCCEEEEcCCCCH-------------HHHHHHHHHHHhhCCCCeEEEeCCCCCCHHH---HHHHhcCccceEEE
Confidence 8 56899999999998632 223567888999999999886 456776542 3222211000 11
Q ss_pred ceEEeeCCccccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHHHHHHH
Q 011641 149 KFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRIS 228 (480)
Q Consensus 149 ~~~v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia 228 (480)
+| ++|.+..+ ...++.|.. + ++++++.+.++++.+++ .++++.+. .+++.|. +.++
T Consensus 451 hf---~~P~~~~~---------lvevv~g~~-t--~~e~~~~~~~l~~~lGk-~~v~v~d~-----~Gfi~Nr---il~~ 506 (715)
T 1wdk_A 451 HF---FNPVHMMP---------LVEVIRGEK-S--SDLAVATTVAYAKKMGK-NPIVVNDC-----PGFLVNR---VLFP 506 (715)
T ss_dssp EC---CSSTTTCC---------EEEEEECSS-C--CHHHHHHHHHHHHHTTC-EEEEEESC-----TTTTHHH---HHHH
T ss_pred Ec---cCCcccCc---------eEEEEECCC-C--CHHHHHHHHHHHHHhCC-EeEEEcCC-----CChhhhH---HHHH
Confidence 11 34543322 112444432 2 58999999999999873 45665543 4556663 4458
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHh
Q 011641 229 SVNAMSALCEATGANVSQVAFAV 251 (480)
Q Consensus 229 ~~nE~~~l~~~~Gid~~~v~~~~ 251 (480)
++||+..++++ |+|++++.+++
T Consensus 507 ~~~Ea~~l~~~-G~~~~~id~~~ 528 (715)
T 1wdk_A 507 YFGGFAKLVSA-GVDFVRIDKVM 528 (715)
T ss_dssp HHHHHHHHHHT-TCCHHHHHHHH
T ss_pred HHHHHHHHHHC-CCCHHHHHHHH
Confidence 89999999997 99999999998
No 62
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.66 E-value=6.9e-15 Score=143.61 Aligned_cols=190 Identities=14% Similarity=0.080 Sum_probs=131.5
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|.||..+|..|+++ |++|++||+++++++.+++... ....+++++++ .++|+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~g~-----------------~~~~~~~~~~~-~~~D~ 60 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRR--GHYLIGVSRQQSTCEKAVERQL-----------------VDEAGQDLSLL-QTAKI 60 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTS-----------------CSEEESCGGGG-TTCSE
T ss_pred CEEEEEcCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHhCCC-----------------CccccCCHHHh-CCCCE
Confidence 7999999999999999999998 8999999999999888764211 01356777787 89999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCccccc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAE 161 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~~ 161 (480)
||+|||.. .+.++++++.+.++++++|+..+++.+...+.+.+.+... ...+-..+++..+|
T Consensus 61 vi~av~~~---------------~~~~~~~~l~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~---~~~~p~~g~~~~gp 122 (279)
T 2f1k_A 61 IFLCTPIQ---------------LILPTLEKLIPHLSPTAIVTDVASVKTAIAEPASQLWSGF---IGGHPMAGTAAQGI 122 (279)
T ss_dssp EEECSCHH---------------HHHHHHHHHGGGSCTTCEEEECCSCCHHHHHHHHHHSTTC---EEEEECCCCSCSSG
T ss_pred EEEECCHH---------------HHHHHHHHHHhhCCCCCEEEECCCCcHHHHHHHHHHhCCE---eecCcccCCccCCH
Confidence 99999842 3577888999999999999887777665555554433210 01112233344456
Q ss_pred cccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHHHHHHHHHH
Q 011641 162 GTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVN 231 (480)
Q Consensus 162 G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~n 231 (480)
+.+..+++....+++... ...+++..+.++++|+.++. .++...+....+++|++.|.-..+..++++
T Consensus 123 ~~a~~~~~~g~~~~~~~~-~~~~~~~~~~v~~l~~~~g~-~~~~~~~~~~~~~~~~~~~~p~~i~~al~~ 190 (279)
T 2f1k_A 123 DGAEENLFVNAPYVLTPT-EYTDPEQLACLRSVLEPLGV-KIYLCTPADHDQAVAWISHLPVMVSAALIQ 190 (279)
T ss_dssp GGCCTTTTTTCEEEEEEC-TTCCHHHHHHHHHHHGGGTC-EEEECCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHhHHHhCCCcEEEecC-CCCCHHHHHHHHHHHHHcCC-EEEEcCHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 665545444433333321 11247889999999999862 344556678899999999975554444443
No 63
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.66 E-value=1.7e-15 Score=146.91 Aligned_cols=197 Identities=12% Similarity=0.064 Sum_probs=134.8
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCe-EEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIE-VAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~-V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|||+|||+|.||..+|..|++. |++ |.+||+++++++.+.+. -++..+++++++++++|
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~--g~~~v~~~~~~~~~~~~~~~~------------------~g~~~~~~~~~~~~~~D 70 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRK--GFRIVQVYSRTEESARELAQK------------------VEAEYTTDLAEVNPYAK 70 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSHHHHHHHHHH------------------TTCEEESCGGGSCSCCS
T ss_pred CeEEEEcCCHHHHHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHH------------------cCCceeCCHHHHhcCCC
Confidence 7899999999999999999998 898 99999999998887642 12456778888788999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCcccc
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLA 160 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~ 160 (480)
+||+|+|.+ .+.++++++.+.++++++|+..|+..+... +.+.+.+. ......+|-...
T Consensus 71 vvi~av~~~---------------~~~~v~~~l~~~~~~~~ivv~~s~~~~~~~--l~~~~~~~----~~~~~~~~~~g~ 129 (266)
T 3d1l_A 71 LYIVSLKDS---------------AFAELLQGIVEGKREEALMVHTAGSIPMNV--WEGHVPHY----GVFYPMQTFSKQ 129 (266)
T ss_dssp EEEECCCHH---------------HHHHHHHHHHTTCCTTCEEEECCTTSCGGG--STTTCSSE----EEEEECCCC---
T ss_pred EEEEecCHH---------------HHHHHHHHHHhhcCCCcEEEECCCCCchHH--HHHHHHhc----cCcCCceecCCC
Confidence 999998842 246778888888888999998887654332 32222211 111234442211
Q ss_pred ccccccccCCCCeEEE-ecCCCcchHHHHHHHHHHHhccCCCCeEEeCCch---hHHHhhhhHhHHHHHHHHHHHHHHHH
Q 011641 161 EGTAIQDLFNPDRVLI-GGRETPEGQKAVKALKDVYAHWVPEDRILTTNLW---SAELSKLAANAFLAQRISSVNAMSAL 236 (480)
Q Consensus 161 ~G~a~~~~~~~~~vvi-G~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~---~ae~~Kl~~N~~~~~~ia~~nE~~~l 236 (480)
+. ..+.+.+ +++ |+ +++..+.++++|+.++. .++...+.. ...++|+++|.. ..+..+.|. +
T Consensus 130 ~~---~~~~~~~-~~v~~~-----~~~~~~~~~~l~~~~g~-~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~ea--l 195 (266)
T 3d1l_A 130 RE---VDFKEIP-FFIEAS-----STEDAAFLKAIASTLSN-RVYDADSEQRKSLHLAAVFTCNFT--NHMYALAAE--L 195 (266)
T ss_dssp CC---CCCTTCC-EEEEES-----SHHHHHHHHHHHHTTCS-CEEECCHHHHHHHHHHHHHHHHHH--HHHHHHHHH--H
T ss_pred ch---hhcCCCe-EEEecC-----CHHHHHHHHHHHHhcCC-cEEEeCHHHHHHHHHHHHHHHHHH--HHHHHHHHH--H
Confidence 11 1223333 445 54 37889999999999862 344444332 457889998862 233444453 6
Q ss_pred HHHhCCCHHHHHHHhcC
Q 011641 237 CEATGANVSQVAFAVGT 253 (480)
Q Consensus 237 ~~~~Gid~~~v~~~~~~ 253 (480)
+++.|+|.+++.+++..
T Consensus 196 ~~~~Gl~~~~~~~l~~~ 212 (266)
T 3d1l_A 196 LKKYNLPFDVMLPLIDE 212 (266)
T ss_dssp HHHTTCCGGGGHHHHHH
T ss_pred HHHcCCCHHHHHHHHHH
Confidence 78999999888877764
No 64
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=99.65 E-value=6.2e-15 Score=147.02 Aligned_cols=247 Identities=19% Similarity=0.170 Sum_probs=158.2
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+|||+|||+|.||+.+|..|+++ |++|++| +++++++.+++.+..+..++.+. ..++.+++++++ +.++|
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~--G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~------~~~~~~~~~~~~-~~~~D 88 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARA--GHEVILI-ARPQHVQAIEATGLRLETQSFDE------QVKVSASSDPSA-VQGAD 88 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHT--TCEEEEE-CCHHHHHHHHHHCEEEECSSCEE------EECCEEESCGGG-GTTCS
T ss_pred CCcEEEECcCHHHHHHHHHHHHC--CCeEEEE-EcHhHHHHHHhCCeEEEcCCCcE------EEeeeeeCCHHH-cCCCC
Confidence 48999999999999999999998 9999999 99999999986433332232210 124567788765 68999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHH-hcCCCCceEEeeCCccc
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILT-HNSKGIKFQILSNPEFL 159 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~-~~~~g~~~~v~~~Pe~~ 159 (480)
+||+|||+. .++++++++.+.++++++|+.. +...+..+.+.+.+. +...+. +..+-.+.
T Consensus 89 ~vilavk~~---------------~~~~~l~~l~~~l~~~~~iv~~-~nGi~~~~~l~~~~~~~vl~g~---~~~~a~~~ 149 (318)
T 3hwr_A 89 LVLFCVKST---------------DTQSAALAMKPALAKSALVLSL-QNGVENADTLRSLLEQEVAAAV---VYVATEMA 149 (318)
T ss_dssp EEEECCCGG---------------GHHHHHHHHTTTSCTTCEEEEE-CSSSSHHHHHHHHCCSEEEEEE---EEEEEEEE
T ss_pred EEEEEcccc---------------cHHHHHHHHHHhcCCCCEEEEe-CCCCCcHHHHHHHcCCcEEEEE---EEEeEEEc
Confidence 999999853 2578899999999999877653 334444455666653 111010 00111223
Q ss_pred cccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhH------------------
Q 011641 160 AEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANA------------------ 221 (480)
Q Consensus 160 ~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~------------------ 221 (480)
+|+.+.+... .++.+|.. +..+.++++|+..+ .......|+...+|.|++.|+
T Consensus 150 gP~~~~~~~~--g~~~ig~~------~~~~~l~~~l~~~~-~~~~~~~Di~~~~w~Kl~~N~~~n~l~al~~~~~g~l~~ 220 (318)
T 3hwr_A 150 GPGHVRHHGR--GELVIEPT------SHGANLAAIFAAAG-VPVETSDNVRGALWAKLILNCAYNALSAITQLPYGRLVR 220 (318)
T ss_dssp ETTEEEEEEE--EEEEECCC------TTTHHHHHHHHHTT-CCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTT
T ss_pred CCeEEEEcCC--ceEEEcCC------HHHHHHHHHHHhCC-CCcEechHHHHHHHHHHHHHhhhhHHHHHHCCCHHHHhc
Confidence 3444332221 13556752 23467888888754 234556799999999999886
Q ss_pred ---HHHHHHHHHHHHHHHHHHhCCCH-----HHHHHHhcCCCCCCCCCc---cCCCCccccchhHh--HHHHHHHHHHCC
Q 011641 222 ---FLAQRISSVNAMSALCEATGANV-----SQVAFAVGTDSRIGPKFL---NASVGFGGSCFQKD--ILNLVYICECNG 288 (480)
Q Consensus 222 ---~~~~~ia~~nE~~~l~~~~Gid~-----~~v~~~~~~~~~~~~~~~---~pg~g~gG~cl~kD--~~~l~~~a~~~g 288 (480)
.+.+....+.|+..++++.|++. +.+++.+...+...+.++ .-| .-..-| ..++++.|+++|
T Consensus 221 ~~~~~~l~~~~~~E~~~va~a~G~~l~~~~~~~~~~~~~~~~~~~sSM~qD~~~g-----r~tEid~i~G~vv~~a~~~g 295 (318)
T 3hwr_A 221 GEGVEAVMRDVMEECFAVARAEGVKLPDDVALAIRRIAETMPRQSSSTAQDLARG-----KRSEIDHLNGLIVRRGDALG 295 (318)
T ss_dssp STTHHHHHHHHHHHHHHHHHHTTCCCCTTHHHHHHHHHHHSTTCCCHHHHHHHTT-----CCCSGGGTHHHHHHHHHHTT
T ss_pred ChhHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHhcCCCCcHHHHHHHcC-----ChhHHHHHHHHHHHHHHHhC
Confidence 34566788999999999999863 334444432221111111 111 111222 247889999999
Q ss_pred CC
Q 011641 289 LP 290 (480)
Q Consensus 289 ~~ 290 (480)
++
T Consensus 296 v~ 297 (318)
T 3hwr_A 296 IP 297 (318)
T ss_dssp CC
T ss_pred CC
Confidence 98
No 65
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.65 E-value=5.2e-15 Score=154.90 Aligned_cols=205 Identities=15% Similarity=0.150 Sum_probs=136.7
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhh--h-----cCCCEEEecCHH
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ--C-----RGKNLFFSTDVE 73 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~--~-----~~~~l~~t~d~~ 73 (480)
||||+|||+|.||.++|..|+++ |++|++||+++++++...+.. +..++..+.. . .....+++++++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~--G~~V~l~D~~~~~~~~~~~~i----~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~ 110 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV--GISVVAVESDPKQLDAAKKII----TFTLEKEASRAHQNGQASAKPKLRFSSSTK 110 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSHHHHHHHHHHH----HHHHHHHHHHHHHTTCCCCCCCEEEESCGG
T ss_pred CCEEEEECcCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHH----HHHHHHHHHcCCCCHHHHHHHHhhhcCCHH
Confidence 47899999999999999999998 999999999999887765310 0011111111 0 012245678884
Q ss_pred HhhccCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCC--CCceE
Q 011641 74 KHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSK--GIKFQ 151 (480)
Q Consensus 74 ~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~--g~~~~ 151 (480)
++++||+||+|||+. +.....+++++.+.++++++|+. ||..+.++ .+.+.+..... |.+|
T Consensus 111 -~~~~aDlVIeaVpe~-------------~~~k~~v~~~l~~~~~~~~ii~s-nTs~~~~~-~la~~~~~~~~~ig~hf- 173 (463)
T 1zcj_A 111 -ELSTVDLVVEAVFED-------------MNLKKKVFAELSALCKPGAFLCT-NTSALNVD-DIASSTDRPQLVIGTHF- 173 (463)
T ss_dssp -GGTTCSEEEECCCSC-------------HHHHHHHHHHHHHHSCTTCEEEE-CCSSSCHH-HHHTTSSCGGGEEEEEE-
T ss_pred -HHCCCCEEEEcCCCC-------------HHHHHHHHHHHHhhCCCCeEEEe-CCCCcCHH-HHHHHhcCCcceEEeec-
Confidence 589999999999852 23346788889999999998875 77766654 44443321110 2222
Q ss_pred EeeCCccccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHHHHHHHHHH
Q 011641 152 ILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVN 231 (480)
Q Consensus 152 v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~n 231 (480)
++|....+ ...++.| ..+ ++++++.+.++++.+++ .++++.+ ..+++.|. +...+++
T Consensus 174 --~~P~~~~~---------lvevv~g-~~t--~~e~~~~~~~l~~~lGk-~~v~v~~-----~~gfi~Nr---ll~~~~~ 230 (463)
T 1zcj_A 174 --FSPAHVMR---------LLEVIPS-RYS--SPTTIATVMSLSKKIGK-IGVVVGN-----CYGFVGNR---MLAPYYN 230 (463)
T ss_dssp --CSSTTTCC---------EEEEEEC-SSC--CHHHHHHHHHHHHHTTC-EEEEBCC-----STTTTHHH---HHHHHHH
T ss_pred --CCCcccce---------eEEEeCC-CCC--CHHHHHHHHHHHHHhCC-EEEEECC-----CccHHHHH---HHHHHHH
Confidence 35654322 1124444 322 68999999999999863 4555554 23345563 3345779
Q ss_pred HHHHHHHHhCCCHHHHHHHhc
Q 011641 232 AMSALCEATGANVSQVAFAVG 252 (480)
Q Consensus 232 E~~~l~~~~Gid~~~v~~~~~ 252 (480)
|...++++ |++++++.+++.
T Consensus 231 ea~~l~~~-G~~~~~id~~~~ 250 (463)
T 1zcj_A 231 QGFFLLEE-GSKPEDVDGVLE 250 (463)
T ss_dssp HHHHHHHT-TCCHHHHHHHHH
T ss_pred HHHHHHHc-CCCHHHHHHHHH
Confidence 99999988 899999999996
No 66
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=99.64 E-value=5.6e-15 Score=146.44 Aligned_cols=206 Identities=14% Similarity=0.112 Sum_probs=144.9
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHc------------CCCCCcCCChHHHHhhhcCCCEEEe
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS------------DQLPIYEPGLDGVVKQCRGKNLFFS 69 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~------------~~~~~~e~~l~~~~~~~~~~~l~~t 69 (480)
.||+|||+|.||..+|..++.+ |++|++||++++.++...+ +... .....++.+ .+++.+
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~--G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~-~~~~~~~~l-----~~i~~~ 78 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG--GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLK-GSLSAEEQL-----SLISSC 78 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCC-SSSCHHHHH-----HTEEEE
T ss_pred CeEEEECCcHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCC-CccCHHHHH-----hhcccc
Confidence 5899999999999999999998 9999999999986554221 1111 011222222 368899
Q ss_pred cCHHHhhccCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEE-EecCCCcchHHHHHHHHHhcCC--
Q 011641 70 TDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVV-EKSTVPVKTAEAIEKILTHNSK-- 146 (480)
Q Consensus 70 ~d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi-~~STv~~gt~~~l~~~l~~~~~-- 146 (480)
+|+++++++||+||.|||.. .+++ ++++++|.+++++++|+. +.|++++.. +...+.....
T Consensus 79 ~~l~~a~~~ad~ViEav~E~-----------l~iK--~~lf~~l~~~~~~~aIlaSNTSsl~is~---ia~~~~~p~r~i 142 (319)
T 3ado_A 79 TNLAEAVEGVVHIQECVPEN-----------LDLK--RKIFAQLDSIVDDRVVLSSSSSCLLPSK---LFTGLAHVKQCI 142 (319)
T ss_dssp CCHHHHTTTEEEEEECCCSC-----------HHHH--HHHHHHHHTTCCSSSEEEECCSSCCHHH---HHTTCTTGGGEE
T ss_pred cchHhHhccCcEEeeccccH-----------HHHH--HHHHHHHHHHhhhcceeehhhhhccchh---hhhhccCCCcEE
Confidence 99999999999999999852 3444 789999999999999884 445556532 2211111110
Q ss_pred CCceEEeeCCccccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHHHHH
Q 011641 147 GIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQR 226 (480)
Q Consensus 147 g~~~~v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ 226 (480)
|.+| |+|.+..|- ..||- +..+ ++++.+.+..+++.+++ .++... -+.-.++.| .+.
T Consensus 143 g~Hf---fNP~~~m~L---------VEiv~-g~~T--s~~~~~~~~~~~~~~gk-~pv~v~----kd~pGFi~N---Rl~ 199 (319)
T 3ado_A 143 VAHP---VNPPYYIPL---------VELVP-HPET--SPATVDRTHALMRKIGQ-SPVRVL----KEIDGFVLN---RLQ 199 (319)
T ss_dssp EEEE---CSSTTTCCE---------EEEEE-CTTC--CHHHHHHHHHHHHHTTC-EEEECS----SCCTTTTHH---HHH
T ss_pred EecC---CCCccccch---------HHhcC-CCCC--cHHHHHHHHHHHHHhCC-ccCCcC----CCCCCEeHH---HHH
Confidence 1121 466554431 13554 4433 78999999999999873 444332 234467888 677
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHhcCC
Q 011641 227 ISSVNAMSALCEATGANVSQVAFAVGTD 254 (480)
Q Consensus 227 ia~~nE~~~l~~~~Gid~~~v~~~~~~~ 254 (480)
.++++|...+.++.+++++++..++...
T Consensus 200 ~~~~~EA~~lv~eGvas~edID~~~~~g 227 (319)
T 3ado_A 200 YAIISEAWRLVEEGIVSPSDLDLVMSDG 227 (319)
T ss_dssp HHHHHHHHHHHHTTSSCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHhC
Confidence 9999999999999999999999998765
No 67
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.64 E-value=1.1e-14 Score=139.87 Aligned_cols=197 Identities=18% Similarity=0.251 Sum_probs=127.8
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCC----eEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhh
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSI----EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV 76 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~----~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~ 76 (480)
||||+|||+|.||.++|..|+++ |+ +|++||+++++++.+.+. .+++.++++++++
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~--g~~~~~~V~~~~r~~~~~~~~~~~------------------~g~~~~~~~~e~~ 61 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINK--NIVSSNQIICSDLNTANLKNASEK------------------YGLTTTTDNNEVA 61 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT--TSSCGGGEEEECSCHHHHHHHHHH------------------HCCEECSCHHHHH
T ss_pred CCeEEEECccHHHHHHHHHHHhC--CCCCCCeEEEEeCCHHHHHHHHHH------------------hCCEEeCChHHHH
Confidence 47999999999999999999998 88 999999999999887641 0256778888888
Q ss_pred ccCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEE-EecCCCcchHHHHHHHHHhcCCCCceEEe--
Q 011641 77 SEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVV-EKSTVPVKTAEAIEKILTHNSKGIKFQIL-- 153 (480)
Q Consensus 77 ~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi-~~STv~~gt~~~l~~~l~~~~~g~~~~v~-- 153 (480)
+++|+||+||| |. .+.++++++.+.++++++|+ +.++++ .+.+.+.+.... . .+.
T Consensus 62 ~~aDvVilav~-~~--------------~~~~v~~~l~~~l~~~~~vvs~~~gi~---~~~l~~~~~~~~---~-~v~~~ 119 (247)
T 3gt0_A 62 KNADILILSIK-PD--------------LYASIINEIKEIIKNDAIIVTIAAGKS---IESTENAFNKKV---K-VVRVM 119 (247)
T ss_dssp HHCSEEEECSC-TT--------------THHHHC---CCSSCTTCEEEECSCCSC---HHHHHHHHCSCC---E-EEEEE
T ss_pred HhCCEEEEEeC-HH--------------HHHHHHHHHHhhcCCCCEEEEecCCCC---HHHHHHHhCCCC---c-EEEEe
Confidence 99999999996 32 24677888988898888877 233444 334555554311 1 122
Q ss_pred -eCCccccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHH-hhhhHhHHHHHHHHHHH
Q 011641 154 -SNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAEL-SKLAANAFLAQRISSVN 231 (480)
Q Consensus 154 -~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~-~Kl~~N~~~~~~ia~~n 231 (480)
..|....+|. ..+..+. ..+++..+.++++|+.++. .+.. +...... +.+. ...-+....++.
T Consensus 120 p~~p~~~~~g~---------~~~~~~~--~~~~~~~~~~~~l~~~~G~--~~~~-~e~~~d~~~a~~-g~gpa~~~~~~e 184 (247)
T 3gt0_A 120 PNTPALVGEGM---------SALCPNE--MVTEKDLEDVLNIFNSFGQ--TEIV-SEKLMDVVTSVS-GSSPAYVYMIIE 184 (247)
T ss_dssp CCGGGGGTCEE---------EEEEECT--TCCHHHHHHHHHHHGGGEE--EEEC-CGGGHHHHHHHH-HHHHHHHHHHHH
T ss_pred CChHHHHcCce---------EEEEeCC--CCCHHHHHHHHHHHHhCCC--EEEe-CHHHccHHHHHh-ccHHHHHHHHHH
Confidence 3444333332 1233322 1257889999999999862 4444 3222222 2222 222233344555
Q ss_pred HHHHHHHHhCCCHHHHHHHhcCC
Q 011641 232 AMSALCEATGANVSQVAFAVGTD 254 (480)
Q Consensus 232 E~~~l~~~~Gid~~~v~~~~~~~ 254 (480)
.+...+.+.|+|.++..+++...
T Consensus 185 al~~a~~~~Gl~~~~a~~~~~~~ 207 (247)
T 3gt0_A 185 AMADAAVLDGMPRNQAYKFAAQA 207 (247)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHH
Confidence 55555889999999999988743
No 68
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.62 E-value=3e-15 Score=147.00 Aligned_cols=204 Identities=14% Similarity=0.087 Sum_probs=134.5
Q ss_pred CcEEEEECC-ChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccC
Q 011641 1 MVKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (480)
Q Consensus 1 ~mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
||||+|||+ |.||.++|..|+++ |++|++||+++++++.+.+.. ++.+ +..+++++|
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~g-------------------~~~~-~~~~~~~~a 68 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDS--AHHLAAIEIAPEGRDRLQGMG-------------------IPLT-DGDGWIDEA 68 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHS--SSEEEEECCSHHHHHHHHHTT-------------------CCCC-CSSGGGGTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHhcC-------------------CCcC-CHHHHhcCC
Confidence 479999999 99999999999998 999999999999988876521 1122 445668899
Q ss_pred cEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCccc
Q 011641 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFL 159 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (480)
|+||+|||.. .+.++++++.+.++++++|+..|+..+ .+.+. +...+.. ++..+|.+.
T Consensus 69 DvVi~av~~~---------------~~~~v~~~l~~~l~~~~ivv~~s~~~~--~~~l~----~~~~~~~-~v~~~P~~~ 126 (286)
T 3c24_A 69 DVVVLALPDN---------------IIEKVAEDIVPRVRPGTIVLILDAAAP--YAGVM----PERADIT-YFIGHPCHP 126 (286)
T ss_dssp SEEEECSCHH---------------HHHHHHHHHGGGSCTTCEEEESCSHHH--HHTCS----CCCTTSE-EEEEEECCS
T ss_pred CEEEEcCCch---------------HHHHHHHHHHHhCCCCCEEEECCCCch--hHHHH----hhhCCCe-EEecCCCCc
Confidence 9999999842 357888899999999999987666432 22222 1111222 333666543
Q ss_pred cc---cc---cccccCC----CCeEEEecCCCcchHHHHHHHHHHHhccCCCC---eEEeCCchhHHHh-hhhHhHHHHH
Q 011641 160 AE---GT---AIQDLFN----PDRVLIGGRETPEGQKAVKALKDVYAHWVPED---RILTTNLWSAELS-KLAANAFLAQ 225 (480)
Q Consensus 160 ~~---G~---a~~~~~~----~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~---~v~~~~~~~ae~~-Kl~~N~~~~~ 225 (480)
.+ +. ...+... ...++++... +++..+.++++|+.++ . .++..+....... |.+.|.....
T Consensus 127 ~~~~~~~~~~~~~g~l~~~~~~~~i~~~~~~---~~~~~~~v~~l~~~~G--~~~~~~~~v~~~~~~~~~~a~~n~~~~~ 201 (286)
T 3c24_A 127 PLFNDETDPAARTDYHGGIAKQAIVCALMQG---PEEHYAIGADICETMW--SPVTRTHRVTTEQLAILEPGLSEMVAMP 201 (286)
T ss_dssp CSSCCCCSHHHHTCSSSSSSCEEEEEEEEES---CTHHHHHHHHHHHHHT--CSEEEEEECCHHHHHHHTTHHHHTTHHH
T ss_pred cccccccchhhccCcccccccceeeeeccCC---CHHHHHHHHHHHHHhc--CCcceEEEeChhHhHHHHHHHHHHHHHH
Confidence 22 11 1111100 0112222111 3678999999999985 3 3444444444444 9999865554
Q ss_pred -HHHHHHHHHHHHHHhCCCHHHHHHHhcC
Q 011641 226 -RISSVNAMSALCEATGANVSQVAFAVGT 253 (480)
Q Consensus 226 -~ia~~nE~~~l~~~~Gid~~~v~~~~~~ 253 (480)
.+++++++...+.+.|+|.+++.+++..
T Consensus 202 ~~~~~~eal~~~~~~~Gl~~~~~~~~~~~ 230 (286)
T 3c24_A 202 FVETMVHAVDECADRYGIDRQAALDFMIG 230 (286)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 4455555778888889999998888764
No 69
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.62 E-value=2.2e-14 Score=143.22 Aligned_cols=197 Identities=14% Similarity=0.129 Sum_probs=132.2
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCC----CeEEEEECCHH--HHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHH
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPS----IEVAVVDISVS--RINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEK 74 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G----~~V~~~D~~~~--~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~ 74 (480)
+|||+|||+|.||.++|..|+++ | ++|++||++++ +++.+++. +++++++..+
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~--G~~~~~~V~v~~r~~~~~~~~~l~~~-------------------G~~~~~~~~e 80 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAA--GVLAAHKIMASSPDMDLATVSALRKM-------------------GVKLTPHNKE 80 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHT--TSSCGGGEEEECSCTTSHHHHHHHHH-------------------TCEEESCHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCCCcceEEEECCCccHHHHHHHHHc-------------------CCEEeCChHH
Confidence 47899999999999999999998 8 89999999986 77776531 2566778888
Q ss_pred hhccCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecC-CCcchHHHHHHHHHhcCCCCceEEe
Q 011641 75 HVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST-VPVKTAEAIEKILTHNSKGIKFQIL 153 (480)
Q Consensus 75 a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST-v~~gt~~~l~~~l~~~~~g~~~~v~ 153 (480)
++++||+||+||| |. .+.++++++.+.++++++||..++ ++ .+.+.+.+.+..+... .+.
T Consensus 81 ~~~~aDvVilav~-~~--------------~~~~vl~~l~~~l~~~~ivvs~s~gi~---~~~l~~~l~~~~~~~~-vv~ 141 (322)
T 2izz_A 81 TVQHSDVLFLAVK-PH--------------IIPFILDEIGADIEDRHIVVSCAAGVT---ISSIEKKLSAFRPAPR-VIR 141 (322)
T ss_dssp HHHHCSEEEECSC-GG--------------GHHHHHHHHGGGCCTTCEEEECCTTCC---HHHHHHHHHTTSSCCE-EEE
T ss_pred HhccCCEEEEEeC-HH--------------HHHHHHHHHHhhcCCCCEEEEeCCCCC---HHHHHHHHhhcCCCCe-EEE
Confidence 8899999999998 32 357788899999988998887654 33 2346666654311111 222
Q ss_pred eCC---ccccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhh--HhHHHHHHHH
Q 011641 154 SNP---EFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLA--ANAFLAQRIS 228 (480)
Q Consensus 154 ~~P---e~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~--~N~~~~~~ia 228 (480)
..| .....| ..++.++.. .+++..+.++++|+.++ ..+....-....++.+. .|.|.. .
T Consensus 142 ~~p~~p~~~~~g---------~~v~~~g~~--~~~~~~~~v~~ll~~~G--~~~~~~e~~~~~~~a~~g~gpa~~~---~ 205 (322)
T 2izz_A 142 CMTNTPVVVREG---------ATVYATGTH--AQVEDGRLMEQLLSSVG--FCTEVEEDLIDAVTGLSGSGPAYAF---T 205 (322)
T ss_dssp EECCGGGGGTCE---------EEEEEECTT--CCHHHHHHHHHHHHTTE--EEEECCGGGHHHHHHHTTTHHHHHH---H
T ss_pred EeCCcHHHHcCC---------eEEEEeCCC--CCHHHHHHHHHHHHhCC--CEEEeCHHHHHHHHHHhcCHHHHHH---H
Confidence 333 222221 135555542 24678899999999985 34444322222333333 243433 4
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHhcC
Q 011641 229 SVNAMSALCEATGANVSQVAFAVGT 253 (480)
Q Consensus 229 ~~nE~~~l~~~~Gid~~~v~~~~~~ 253 (480)
+++.++..+.+.|+|.+...+++..
T Consensus 206 ~~eala~a~~~~Gl~~~~a~~l~~~ 230 (322)
T 2izz_A 206 ALDALADGGVKMGLPRRLAVRLGAQ 230 (322)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 5556666688999999888887764
No 70
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=99.61 E-value=5.3e-14 Score=139.88 Aligned_cols=255 Identities=15% Similarity=0.078 Sum_probs=158.5
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCC-ChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEP-GLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~-~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|||+|||+|.||+.+|..|+++ |++|++|++++ .+.+++.+..+..+ +-.. . ..+.+++++++ +..+|
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~--g~~V~~~~r~~--~~~i~~~g~~~~~~~g~~~----~--~~~~~~~~~~~-~~~~D 71 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS--GEDVHFLLRRD--YEAIAGNGLKVFSINGDFT----L--PHVKGYRAPEE-IGPMD 71 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT--SCCEEEECSTT--HHHHHHTCEEEEETTCCEE----E--SCCCEESCHHH-HCCCS
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCeEEEEEcCc--HHHHHhCCCEEEcCCCeEE----E--eeceeecCHHH-cCCCC
Confidence 7999999999999999999998 99999999986 37777543222110 0000 0 02345677765 78999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCcccc
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLA 160 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~ 160 (480)
+||+|||+.. +.++++.+.+.++++++|+.. +...+..+.+.+.+.+... ....+..+-.+..
T Consensus 72 ~vilavk~~~---------------~~~~l~~l~~~l~~~~~iv~l-~nGi~~~~~l~~~~~~~~v-~~~~~~~~a~~~~ 134 (312)
T 3hn2_A 72 LVLVGLKTFA---------------NSRYEELIRPLVEEGTQILTL-QNGLGNEEALATLFGAERI-IGGVAFLCSNRGE 134 (312)
T ss_dssp EEEECCCGGG---------------GGGHHHHHGGGCCTTCEEEEC-CSSSSHHHHHHHHTCGGGE-EEEEEEEECCBCS
T ss_pred EEEEecCCCC---------------cHHHHHHHHhhcCCCCEEEEe-cCCCCcHHHHHHHCCCCcE-EEEEEEeeeEEcC
Confidence 9999998532 356789999999988877642 3344445566666543210 0001112223445
Q ss_pred ccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhH-------------------
Q 011641 161 EGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANA------------------- 221 (480)
Q Consensus 161 ~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~------------------- 221 (480)
||.+.+.. +..+.+|..+.. +.+..+.+.++|+..+ .......|+...+|.|++.|+
T Consensus 135 p~~v~~~~--~g~~~ig~~~~~-~~~~~~~l~~~l~~~g-~~~~~~~di~~~~w~Kl~~N~~~n~l~al~~~~~G~l~~~ 210 (312)
T 3hn2_A 135 PGEVHHLG--AGRIILGEFLPR-DTGRIEELAAMFRQAG-VDCRTTDDLKRARWEKLVWNIPFNGLCALLQQPVNLILAR 210 (312)
T ss_dssp SSEEEECE--EEEEEEEESSCC-CSHHHHHHHHHHHHTT-CCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTS
T ss_pred CcEEEECC--CCeEEEecCCCC-ccHHHHHHHHHHHhCC-CCcEEChHHHHHHHHHHHHHHhHHHHHHHHCCCHHHHHhC
Confidence 66654332 345778865322 2456778889998764 234556799999999998876
Q ss_pred --HHHHHHHHHHHHHHHHHHhC--CC-----HHHHHHHhcCCCCCCCCCccCCCCccccchhHh--HHHHHHHHHHCCCC
Q 011641 222 --FLAQRISSVNAMSALCEATG--AN-----VSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKD--ILNLVYICECNGLP 290 (480)
Q Consensus 222 --~~~~~ia~~nE~~~l~~~~G--id-----~~~v~~~~~~~~~~~~~~~~pg~g~gG~cl~kD--~~~l~~~a~~~g~~ 290 (480)
.+.+....+.|+..++++.| ++ .+.+++.....++..+.+++ .. --|.-..-| ..++++.|+++|++
T Consensus 211 ~~~~~l~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~~~~~~~~~sSM~q-D~-~~gr~tEid~i~G~vv~~a~~~gv~ 288 (312)
T 3hn2_A 211 DVSRKLVRGIMLEVIAGANAQGLATFIADGYVDDMLEFTDAMGEYKPSMEI-DR-EEGRPLEIAAIFRTPLAYGAREGIA 288 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCSSCCCTTHHHHHHHHHTTSCSCCCHHHH-HH-HTTCCCCHHHHTHHHHHHHHHTTCC
T ss_pred hhHHHHHHHHHHHHHHHHHHcCCccCCCHHHHHHHHHHHhcCCCCCchHHH-HH-HhCCCccHHHHhhHHHHHHHHhCCC
Confidence 34566788999999999999 65 34455544432221111110 00 011112222 23678889999998
No 71
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=99.60 E-value=6.3e-14 Score=139.83 Aligned_cols=250 Identities=16% Similarity=0.149 Sum_probs=156.6
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcC---CChHHHHhhhcCCCEEEecCHHHhhcc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYE---PGLDGVVKQCRGKNLFFSTDVEKHVSE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e---~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (480)
|||+|||+|.||+.+|..|+++ |++|++|++++ .+.+++....+.. .... . ..+.++++++++.+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~--g~~V~~~~r~~--~~~i~~~Gl~~~~~~~g~~~-----~--~~~~~~~~~~~~~~~ 71 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT--GHCVSVVSRSD--YETVKAKGIRIRSATLGDYT-----F--RPAAVVRSAAELETK 71 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT--TCEEEEECSTT--HHHHHHHCEEEEETTTCCEE-----E--CCSCEESCGGGCSSC
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCeEEEEeCCh--HHHHHhCCcEEeecCCCcEE-----E--eeeeeECCHHHcCCC
Confidence 8999999999999999999998 99999999987 3667653221111 1000 0 023456787775558
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCC--
Q 011641 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNP-- 156 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~P-- 156 (480)
+|+||+|||+... .++++.+.+.++++++|+... ...+..+.+.+.+... .++++|
T Consensus 72 ~DlVilavK~~~~---------------~~~l~~l~~~l~~~t~Iv~~~-nGi~~~~~l~~~~~~~------~vl~g~~~ 129 (320)
T 3i83_A 72 PDCTLLCIKVVEG---------------ADRVGLLRDAVAPDTGIVLIS-NGIDIEPEVAAAFPDN------EVISGLAF 129 (320)
T ss_dssp CSEEEECCCCCTT---------------CCHHHHHTTSCCTTCEEEEEC-SSSSCSHHHHHHSTTS------CEEEEEEE
T ss_pred CCEEEEecCCCCh---------------HHHHHHHHhhcCCCCEEEEeC-CCCChHHHHHHHCCCC------cEEEEEEE
Confidence 9999999996432 356788999999888776432 3334445565555432 123333
Q ss_pred ---ccccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHH-----------
Q 011641 157 ---EFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAF----------- 222 (480)
Q Consensus 157 ---e~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~----------- 222 (480)
.+..||...+.. +..+++|..+.. +.+..+.+.++|+..+ .......|+...+|.|++.|+-
T Consensus 130 ~~a~~~~pg~v~~~~--~~~~~ig~~~~~-~~~~~~~l~~~l~~~~-~~~~~~~di~~~~w~Kl~~N~~~N~ltal~~~~ 205 (320)
T 3i83_A 130 IGVTRTAPGEIWHQA--YGRLMLGNYPGG-VSERVKTLAAAFEEAG-IDGIATENITTARWQKCVWNAAFNPLSVLSGGL 205 (320)
T ss_dssp EEEEEEETTEEEEEE--EEEEEEEESSSC-CCHHHHHHHHHHHHTT-SCEEECSCHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred eceEEcCCCEEEECC--CCEEEEecCCCC-ccHHHHHHHHHHHhCC-CCceECHHHHHHHHHHHHHHHhhhHHHHHHCCC
Confidence 233455543332 346778854222 2356788889998754 2345567999999999998851
Q ss_pred ---------HHHHHHHHHHHHHHHHHhCCCH-----HHHHHHhcCCCCCCCCCccCCCCccccchhHh--HHHHHHHHHH
Q 011641 223 ---------LAQRISSVNAMSALCEATGANV-----SQVAFAVGTDSRIGPKFLNASVGFGGSCFQKD--ILNLVYICEC 286 (480)
Q Consensus 223 ---------~~~~ia~~nE~~~l~~~~Gid~-----~~v~~~~~~~~~~~~~~~~pg~g~gG~cl~kD--~~~l~~~a~~ 286 (480)
+.+....+.|+..++++.|++. +.+++.....+...+.+++ .. --|.-..-| ..++++.|++
T Consensus 206 ~g~~~~~~~~~l~~~~~~E~~~va~a~G~~l~~~~~~~~~~~~~~~~~~~sSM~q-D~-~~gr~tEid~i~G~vv~~a~~ 283 (320)
T 3i83_A 206 DTLDILSTQEGFVRAIMQEIRAVAAANGHPLPEDIVEKNVASTYKMPPYKTSMLV-DF-EAGQPMETEVILGNAVRAGRR 283 (320)
T ss_dssp CHHHHHHHCHHHHHHHHHHHHHHHHHTTCCCCTTHHHHHHHHHHHSCCCCCHHHH-HH-HHTCCCCHHHHTHHHHHHHHH
T ss_pred HHHHHhCcHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHhcCCCCCCcHHH-HH-HhCCCchHHHHccHHHHHHHH
Confidence 3456688999999999999873 3444444322211111110 00 001111222 2378889999
Q ss_pred CCCC
Q 011641 287 NGLP 290 (480)
Q Consensus 287 ~g~~ 290 (480)
+|++
T Consensus 284 ~gv~ 287 (320)
T 3i83_A 284 TRVA 287 (320)
T ss_dssp TTCC
T ss_pred hCCC
Confidence 9998
No 72
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.60 E-value=3.5e-14 Score=142.41 Aligned_cols=185 Identities=12% Similarity=0.094 Sum_probs=124.5
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc---
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS--- 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--- 77 (480)
+|||+|||+|.||.++|..|.++ |++|++||+++++++.+.+. ++..+++++++++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~--G~~V~~~dr~~~~~~~a~~~-------------------G~~~~~~~~e~~~~a~ 66 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAA--NHSVFGYNRSRSGAKSAVDE-------------------GFDVSADLEATLQRAA 66 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHT-------------------TCCEESCHHHHHHHHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc-------------------CCeeeCCHHHHHHhcc
Confidence 47899999999999999999998 99999999999988876542 1344567776665
Q ss_pred -cCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCC
Q 011641 78 -EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNP 156 (480)
Q Consensus 78 -~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~P 156 (480)
+||+||+|||. ..+.++++++.+. +++++|++.+++.+...+.+.+.+.. .. ++..+|
T Consensus 67 ~~aDlVilavP~---------------~~~~~vl~~l~~~-~~~~iv~Dv~Svk~~i~~~~~~~~~~----~~-~v~~HP 125 (341)
T 3ktd_A 67 AEDALIVLAVPM---------------TAIDSLLDAVHTH-APNNGFTDVVSVKTAVYDAVKARNMQ----HR-YVGSHP 125 (341)
T ss_dssp HTTCEEEECSCH---------------HHHHHHHHHHHHH-CTTCCEEECCSCSHHHHHHHHHTTCG----GG-EECEEE
T ss_pred cCCCEEEEeCCH---------------HHHHHHHHHHHcc-CCCCEEEEcCCCChHHHHHHHHhCCC----Cc-EecCCc
Confidence 47999999983 2356778888886 78899998888877666665543321 12 334455
Q ss_pred cc----ccccccccccCCCCeEEEecCCCcchHH--------HHHHHHHHHhccCCCCeEEeCCc-hhHHHhhhhHhHHH
Q 011641 157 EF----LAEGTAIQDLFNPDRVLIGGRETPEGQK--------AVKALKDVYAHWVPEDRILTTNL-WSAELSKLAANAFL 223 (480)
Q Consensus 157 e~----~~~G~a~~~~~~~~~vviG~~~~~~~~~--------~~e~~~~l~~~~~~~~~v~~~~~-~~ae~~Kl~~N~~~ 223 (480)
-. .++..+..+++....+++-.. +..+++ .++.++++|+.++ ..+..++. .....+.++...-.
T Consensus 126 maG~e~sG~~aa~~~Lf~g~~~iltp~-~~~~~e~~~~~~~~~~~~v~~l~~~~G--a~v~~~~~~~HD~~~A~vshlPh 202 (341)
T 3ktd_A 126 MAGTANSGWSASMDGLFKRAVWVVTFD-QLFDGTDINSTWISIWKDVVQMALAVG--AEVVPSRVGPHDAAAARVSHLTH 202 (341)
T ss_dssp CCSCC-CCGGGCCSSTTTTCEEEECCG-GGTSSCCCCHHHHHHHHHHHHHHHHTT--CEEEECCHHHHHHHHHHHTHHHH
T ss_pred cccccccchhhhhhHHhcCCeEEEEeC-CCCChhhhccchHHHHHHHHHHHHHcC--CEEEEeCHHHHHHHHHHHhHHHH
Confidence 43 344445555655544444221 112345 7889999999986 34555554 44566777766555
Q ss_pred HHHHHHH
Q 011641 224 AQRISSV 230 (480)
Q Consensus 224 ~~~ia~~ 230 (480)
.+..+++
T Consensus 203 ~ia~aL~ 209 (341)
T 3ktd_A 203 ILAETLA 209 (341)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444444
No 73
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.58 E-value=3.5e-14 Score=140.24 Aligned_cols=224 Identities=14% Similarity=0.122 Sum_probs=145.9
Q ss_pred CcEEEEEC-CChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccC
Q 011641 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
|+||+||| +|+||.++|..|++. |++|++||++++. +..+++++|
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~--G~~V~~~~~~~~~--------------------------------~~~~~~~~a 66 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRAS--GYPISILDREDWA--------------------------------VAESILANA 66 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTT--TCCEEEECTTCGG--------------------------------GHHHHHTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhC--CCeEEEEECCccc--------------------------------CHHHHhcCC
Confidence 35899999 999999999999998 9999999987531 234568899
Q ss_pred cEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCccc
Q 011641 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFL 159 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (480)
|+||+|||.+ .+.++++++.+.++++++|++.+++.....+.+.+.+ . .. ++..+|.+.
T Consensus 67 DvVilavp~~---------------~~~~vl~~l~~~l~~~~iv~~~~svk~~~~~~~~~~~---~--~~-~v~~hP~~g 125 (298)
T 2pv7_A 67 DVVIVSVPIN---------------LTLETIERLKPYLTENMLLADLTSVKREPLAKMLEVH---T--GA-VLGLHPMFG 125 (298)
T ss_dssp SEEEECSCGG---------------GHHHHHHHHGGGCCTTSEEEECCSCCHHHHHHHHHHC---S--SE-EEEEEECSC
T ss_pred CEEEEeCCHH---------------HHHHHHHHHHhhcCCCcEEEECCCCCcHHHHHHHHhc---C--CC-EEeeCCCCC
Confidence 9999999853 2577888999999999999988887766555544332 1 12 344455433
Q ss_pred cccccccccCCCCeEEE-ecCCCcchHHHHHHHHHHHhccCCCCeEEeCCc-hhHHHhhhhHhHHHHHHHHHHHHHHHHH
Q 011641 160 AEGTAIQDLFNPDRVLI-GGRETPEGQKAVKALKDVYAHWVPEDRILTTNL-WSAELSKLAANAFLAQRISSVNAMSALC 237 (480)
Q Consensus 160 ~~G~a~~~~~~~~~vvi-G~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~-~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (480)
.+. ..+....+++ .+. +++..+.++++|+.++ ..+..++. ...++++++.+....+.+++++.++
T Consensus 126 ~~~----~~~~g~~~~l~~~~----~~~~~~~v~~l~~~~G--~~~~~~~~~~~d~~~a~~~~~p~~~a~~l~~~l~--- 192 (298)
T 2pv7_A 126 ADI----ASMAKQVVVRCDGR----FPERYEWLLEQIQIWG--AKIYQTNATEHDHNMTYIQALRHFSTFANGLHLS--- 192 (298)
T ss_dssp TTC----SCCTTCEEEEEEEE----CGGGTHHHHHHHHHTT--CEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHT---
T ss_pred CCc----hhhcCCeEEEecCC----CHHHHHHHHHHHHHcC--CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 222 1122222333 232 3567889999999985 35555554 4578999999987777778877665
Q ss_pred HHhCCCHHHHHHHhcCCCCCCCCCccCCCCccccchhHhHHH-HHHHHHHCCCChhhHHHHHHHHHhHHhHHHHHHHHHH
Q 011641 238 EATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILN-LVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVA 316 (480)
Q Consensus 238 ~~~Gid~~~v~~~~~~~~~~~~~~~~pg~g~gG~cl~kD~~~-l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~~ 316 (480)
+.|.+..+..+.+. .|| +|... +..++ +.+ ..+|+.....|..... .++.+.+
T Consensus 193 -~~g~~~~~~~~la~-------------~~f------~~~~~~~~ria---~~~--p~~~~di~~sn~~~~~-~l~~~~~ 246 (298)
T 2pv7_A 193 -KQPINLANLLALSS-------------PIY------RLELAMIGRLF---AQD--AELYADIIMDKSENLA-VIETLKQ 246 (298)
T ss_dssp -TSSCCHHHHHHTCC-------------HHH------HHHHHHHHHHH---TSC--HHHHHHHHC----CHH-HHHHHHH
T ss_pred -hcCCCHHHHHhhcC-------------HHH------HHHHHHHHHHh---cCC--HHHHHHHHHHCHHHHH-HHHHHHH
Confidence 37777765554332 112 33222 33333 223 5678877778877776 6666655
Q ss_pred Hh
Q 011641 317 SM 318 (480)
Q Consensus 317 ~l 318 (480)
.+
T Consensus 247 ~l 248 (298)
T 2pv7_A 247 TY 248 (298)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 74
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.56 E-value=2.3e-13 Score=133.22 Aligned_cols=195 Identities=15% Similarity=0.208 Sum_probs=128.0
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCC---eEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSI---EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~---~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (480)
+|||+|||+|.||.++|..|+++ |+ +|++||+++++++.+.+. -+++.+++..++++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~--g~~~~~V~v~dr~~~~~~~l~~~------------------~gi~~~~~~~~~~~ 62 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN--GYDPNRICVTNRSLDKLDFFKEK------------------CGVHTTQDNRQGAL 62 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT--TCCGGGEEEECSSSHHHHHHHHT------------------TCCEEESCHHHHHS
T ss_pred CCEEEEEcccHHHHHHHHHHHHC--CCCCCeEEEEeCCHHHHHHHHHH------------------cCCEEeCChHHHHh
Confidence 37899999999999999999998 88 999999999999888753 13567788888899
Q ss_pred cCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhh-CCCCcEEEEe-cCCCcchHHHHHHHHHhcCCCCceEEeeC
Q 011641 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADV-SKSDKIVVEK-STVPVKTAEAIEKILTHNSKGIKFQILSN 155 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~-l~~~~iVi~~-STv~~gt~~~l~~~l~~~~~g~~~~v~~~ 155 (480)
++|+||+|||. . .+.++++++.+. ++++++|+.. +.++ .+.+.+.+.... . .+-..
T Consensus 63 ~aDvVilav~p-~--------------~~~~vl~~l~~~~l~~~~iiiS~~agi~---~~~l~~~l~~~~---~-vvr~m 120 (280)
T 3tri_A 63 NADVVVLAVKP-H--------------QIKMVCEELKDILSETKILVISLAVGVT---TPLIEKWLGKAS---R-IVRAM 120 (280)
T ss_dssp SCSEEEECSCG-G--------------GHHHHHHHHHHHHHTTTCEEEECCTTCC---HHHHHHHHTCCS---S-EEEEE
T ss_pred cCCeEEEEeCH-H--------------HHHHHHHHHHhhccCCCeEEEEecCCCC---HHHHHHHcCCCC---e-EEEEe
Confidence 99999999973 1 257888999988 8888777632 2233 345666664321 1 22233
Q ss_pred Cc---cccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCch-hHHHhhh--hHhHHHHHHHHH
Q 011641 156 PE---FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLW-SAELSKL--AANAFLAQRISS 229 (480)
Q Consensus 156 Pe---~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~-~ae~~Kl--~~N~~~~~~ia~ 229 (480)
|. ....|. ..+..+. ..+++..+.++++|+.++ ..+...+-. -...+-+ ..+.|.. .+
T Consensus 121 Pn~p~~v~~g~---------~~l~~~~--~~~~~~~~~v~~l~~~iG--~~~~v~~E~~~d~~talsgsgpa~~~---~~ 184 (280)
T 3tri_A 121 PNTPSSVRAGA---------TGLFANE--TVDKDQKNLAESIMRAVG--LVIWVSSEDQIEKIAALSGSGPAYIF---LI 184 (280)
T ss_dssp CCGGGGGTCEE---------EEEECCT--TSCHHHHHHHHHHHGGGE--EEEECSSHHHHHHHHHHTTSHHHHHH---HH
T ss_pred cCChHHhcCcc---------EEEEeCC--CCCHHHHHHHHHHHHHCC--CeEEECCHHHhhHHHHHhccHHHHHH---HH
Confidence 42 222211 1233332 235789999999999986 244443311 1111222 2233443 33
Q ss_pred HHHHHHHHHHhCCCHHHHHHHhcC
Q 011641 230 VNAMSALCEATGANVSQVAFAVGT 253 (480)
Q Consensus 230 ~nE~~~l~~~~Gid~~~v~~~~~~ 253 (480)
+.-+..-+.+.|++.++..+++..
T Consensus 185 ~eal~~a~v~~Gl~~~~a~~l~~~ 208 (280)
T 3tri_A 185 MEALQEAAEQLGLTKETAELLTEQ 208 (280)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHH
Confidence 444445577899999888887663
No 75
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.55 E-value=1e-13 Score=133.85 Aligned_cols=193 Identities=11% Similarity=0.170 Sum_probs=126.3
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||+|||+|.||..+|..|++. |++|.+||+++++++.+.+.. ++..+++++++++++|
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~--g~~v~~~~~~~~~~~~~~~~~------------------g~~~~~~~~~~~~~~D 62 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQT--PHELIISGSSLERSKEIAEQL------------------ALPYAMSHQDLIDQVD 62 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTS--SCEEEEECSSHHHHHHHHHHH------------------TCCBCSSHHHHHHTCS
T ss_pred ccEEEEECCCHHHHHHHHHHHhC--CCeEEEECCCHHHHHHHHHHc------------------CCEeeCCHHHHHhcCC
Confidence 68999999999999999999987 899999999999988876420 1334567888888999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEe-cCCCcchHHHHHHHHHhcCCCCceEEeeCC---
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEK-STVPVKTAEAIEKILTHNSKGIKFQILSNP--- 156 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~-STv~~gt~~~l~~~l~~~~~g~~~~v~~~P--- 156 (480)
+||+|+| |. .+.++++. +.++++|+.. +++++. .+.+.++.. ..+ +-..|
T Consensus 63 ~Vi~~v~-~~--------------~~~~v~~~----l~~~~~vv~~~~~~~~~---~l~~~~~~~---~~~-v~~~p~~~ 116 (259)
T 2ahr_A 63 LVILGIK-PQ--------------LFETVLKP----LHFKQPIISMAAGISLQ---RLATFVGQD---LPL-LRIMPNMN 116 (259)
T ss_dssp EEEECSC-GG--------------GHHHHHTT----SCCCSCEEECCTTCCHH---HHHHHHCTT---SCE-EEEECCGG
T ss_pred EEEEEeC-cH--------------hHHHHHHH----hccCCEEEEeCCCCCHH---HHHHhcCCC---CCE-EEEcCCch
Confidence 9999998 32 12333333 4467777766 356544 344444431 122 11222
Q ss_pred ccccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHHHHHHHHHHHHHHH
Q 011641 157 EFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSAL 236 (480)
Q Consensus 157 e~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l 236 (480)
.....| ...++.|+. .+++..+.++++|+.++ ..+..........+|+..+.. .....+++.++..
T Consensus 117 ~~~~~g--------~~~i~~~~~---~~~~~~~~~~~ll~~~G--~~~~~~~~~~d~~~al~g~~~-~~~~~~~~~la~~ 182 (259)
T 2ahr_A 117 AQILQS--------STALTGNAL---VSQELQARVRDLTDSFG--STFDISEKDFDTFTALAGSSP-AYIYLFIEALAKA 182 (259)
T ss_dssp GGGTCE--------EEEEEECTT---CCHHHHHHHHHHHHTTE--EEEECCGGGHHHHHHHHTTHH-HHHHHHHHHHHHH
T ss_pred HHHcCc--------eEEEEcCCC---CCHHHHHHHHHHHHhCC--CEEEecHHHccHHHHHhccHH-HHHHHHHHHHHHH
Confidence 222222 112333332 14788999999999985 244444445566677653321 1234566677777
Q ss_pred HHHhCCCHHHHHHHhcC
Q 011641 237 CEATGANVSQVAFAVGT 253 (480)
Q Consensus 237 ~~~~Gid~~~v~~~~~~ 253 (480)
+++.|+|.+++.+++..
T Consensus 183 ~~~~Gl~~~~~~~~~~~ 199 (259)
T 2ahr_A 183 GVKNGIPKAKALEIVTQ 199 (259)
T ss_dssp HHHTTCCHHHHHHHHHH
T ss_pred HHHcCCCHHHHHHHHHH
Confidence 99999999999988874
No 76
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.53 E-value=1.2e-13 Score=129.01 Aligned_cols=186 Identities=15% Similarity=0.104 Sum_probs=125.7
Q ss_pred cEEEEEC-CChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|||+||| +|.||..+|..|+++ |++|+++|+++++.+.+.+.. ...+ ....+.. ++++++++++|
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~--g~~V~~~~r~~~~~~~~~~~~--------~~~~---~~~~~~~-~~~~~~~~~~D 66 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATL--GHEIVVGSRREEKAEAKAAEY--------RRIA---GDASITG-MKNEDAAEACD 66 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSHHHHHHHHHHH--------HHHH---SSCCEEE-EEHHHHHHHCS
T ss_pred CeEEEEcCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHh--------cccc---ccCCCCh-hhHHHHHhcCC
Confidence 7999999 999999999999998 899999999999888776420 0000 0123553 56777789999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecC-CCc-----------chHHHHHHHHHhcCCCC
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST-VPV-----------KTAEAIEKILTHNSKGI 148 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST-v~~-----------gt~~~l~~~l~~~~~g~ 148 (480)
+||+|+|.+ .+.++++++.+.++ +++|+..++ +.+ ...+.+.+.+.. .
T Consensus 67 ~Vi~~~~~~---------------~~~~~~~~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~----~ 126 (212)
T 1jay_A 67 IAVLTIPWE---------------HAIDTARDLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLES----E 126 (212)
T ss_dssp EEEECSCHH---------------HHHHHHHHTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTC----S
T ss_pred EEEEeCChh---------------hHHHHHHHHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCC----C
Confidence 999998732 24566777777674 888887776 332 225666666642 1
Q ss_pred ceEEeeCCccccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhcc-CCCCeEEeCCchhHHHhhhhHhHHHHHHH
Q 011641 149 KFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHW-VPEDRILTTNLWSAELSKLAANAFLAQRI 227 (480)
Q Consensus 149 ~~~v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~-~~~~~v~~~~~~~ae~~Kl~~N~~~~~~i 227 (480)
.+.-++.|.......... ......+++++. +++..+.++++|+.+ +. ..+...+.+.+.++|.+.|.+..++.
T Consensus 127 ~~v~~~~~~~~~~~~~~~-~~~~~~~~~~g~----~~~~~~~v~~l~~~~~G~-~~~~~~~~~~a~~~k~~~~~~~~~~~ 200 (212)
T 1jay_A 127 KVVSALHTIPAARFANLD-EKFDWDVPVCGD----DDESKKVVMSLISEIDGL-RPLDAGPLSNSRLVESLTPLILNIMR 200 (212)
T ss_dssp CEEECCTTCCHHHHHCTT-CCCCEEEEEEES----CHHHHHHHHHHHHHSTTE-EEEEEESGGGHHHHHTHHHHHHHHHH
T ss_pred eEEEEccchHHHHhhCcC-CCCCccEEEECC----cHHHHHHHHHHHHHcCCC-CceeccchhHHHHhcchHHHHHHHHH
Confidence 233334465443322111 111123456665 378899999999998 63 45566789999999999998765543
No 77
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.52 E-value=3.2e-13 Score=130.40 Aligned_cols=189 Identities=13% Similarity=0.124 Sum_probs=123.3
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCC----CeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhh
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPS----IEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV 76 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G----~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~ 76 (480)
+|||+|||+|.||.++|..|+++ | ++|++||+++++ . +++.++++.+++
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~--g~~~~~~v~~~~~~~~~-----~--------------------g~~~~~~~~~~~ 56 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANA--NIIKKENLFYYGPSKKN-----T--------------------TLNYMSSNEELA 56 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHH--TSSCGGGEEEECSSCCS-----S--------------------SSEECSCHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHC--CCCCCCeEEEEeCCccc-----C--------------------ceEEeCCHHHHH
Confidence 37999999999999999999998 8 799999998764 1 145667888888
Q ss_pred ccCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCce-EE-ee
Q 011641 77 SEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKF-QI-LS 154 (480)
Q Consensus 77 ~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~-~v-~~ 154 (480)
+++|+||+|||.. .++++++++.+.++++.+|.+.+++++. .+.+.+.+.. .+ .+ ..
T Consensus 57 ~~~D~vi~~v~~~---------------~~~~v~~~l~~~l~~~~vv~~~~gi~~~---~l~~~~~~~~---~~v~~~p~ 115 (262)
T 2rcy_A 57 RHCDIIVCAVKPD---------------IAGSVLNNIKPYLSSKLLISICGGLNIG---KLEEMVGSEN---KIVWVMPN 115 (262)
T ss_dssp HHCSEEEECSCTT---------------THHHHHHHSGGGCTTCEEEECCSSCCHH---HHHHHHCTTS---EEEEEECC
T ss_pred hcCCEEEEEeCHH---------------HHHHHHHHHHHhcCCCEEEEECCCCCHH---HHHHHhCCCC---cEEEECCC
Confidence 9999999999832 2467788888888544455666777664 3444444310 11 11 12
Q ss_pred CCccccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhH--hHHHHHHHHHHHH
Q 011641 155 NPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAA--NAFLAQRISSVNA 232 (480)
Q Consensus 155 ~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~--N~~~~~~ia~~nE 232 (480)
.|.....| ..++.++.. .+++..+.++++|+.++ .++...+-....++++.. |.+. ..++..
T Consensus 116 ~p~~~~~g---------~~~~~~~~~--~~~~~~~~~~~ll~~~G--~~~~~~~~~~~~~~a~~~~~~~~~---~~~~~a 179 (262)
T 2rcy_A 116 TPCLVGEG---------SFIYCSNKN--VNSTDKKYVNDIFNSCG--IIHEIKEKDMDIATAISGCGPAYV---YLFIES 179 (262)
T ss_dssp GGGGGTCE---------EEEEEECTT--CCHHHHHHHHHHHHTSE--EEEECCGGGHHHHHHHTTSHHHHH---HHHHHH
T ss_pred hHHHHcCC---------eEEEEeCCC--CCHHHHHHHHHHHHhCC--CEEEeCHHHccHHHHHHccHHHHH---HHHHHH
Confidence 33332222 123444431 24778999999999985 244444323344455433 4333 455555
Q ss_pred HHHHHHHhCCCHHHHHHHhcC
Q 011641 233 MSALCEATGANVSQVAFAVGT 253 (480)
Q Consensus 233 ~~~l~~~~Gid~~~v~~~~~~ 253 (480)
++..+.+.|++.++..+.+..
T Consensus 180 l~~~~~~~Gl~~~~~~~~~~~ 200 (262)
T 2rcy_A 180 LIDAGVKNGLSRELSKNLVLQ 200 (262)
T ss_dssp HHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHH
Confidence 666678999999887777753
No 78
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.52 E-value=1.9e-13 Score=132.14 Aligned_cols=190 Identities=9% Similarity=0.163 Sum_probs=119.2
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCC-CeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPS-IEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G-~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|||+|||+|.||..+|..|+++ | ++|++||+++++++.+.+. -+++.++++.+++ ++|
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~--g~~~v~~~~r~~~~~~~~~~~------------------~g~~~~~~~~~~~-~~D 59 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQ--GGYRIYIANRGAEKRERLEKE------------------LGVETSATLPELH-SDD 59 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--CSCEEEEECSSHHHHHHHHHH------------------TCCEEESSCCCCC-TTS
T ss_pred CEEEEECchHHHHHHHHHHHHC--CCCeEEEECCCHHHHHHHHHh------------------cCCEEeCCHHHHh-cCC
Confidence 7999999999999999999998 8 9999999999999887652 0245566766777 999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEe-cCCCcchHHHHHHHHHhcCCCCceEEe-e-CCc
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEK-STVPVKTAEAIEKILTHNSKGIKFQIL-S-NPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~-STv~~gt~~~l~~~l~~~~~g~~~~v~-~-~Pe 157 (480)
+||+||| |. .++++++++.+ + +++|+.. |++++ +.+.+.+.+. ..+.-+ . .|.
T Consensus 60 ~vi~~v~-~~--------------~~~~v~~~l~~--~-~~ivv~~~~g~~~---~~l~~~~~~~---~~~v~~~~~~~~ 115 (263)
T 1yqg_A 60 VLILAVK-PQ--------------DMEAACKNIRT--N-GALVLSVAAGLSV---GTLSRYLGGT---RRIVRVMPNTPG 115 (263)
T ss_dssp EEEECSC-HH--------------HHHHHHTTCCC--T-TCEEEECCTTCCH---HHHHHHTTSC---CCEEEEECCGGG
T ss_pred EEEEEeC-ch--------------hHHHHHHHhcc--C-CCEEEEecCCCCH---HHHHHHcCCC---CcEEEEcCCHHH
Confidence 9999998 42 34556655544 4 7888776 66665 4455554431 122111 1 122
Q ss_pred cccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeC-CchhHHHhhhh--HhHHHHHHHHHHHHHH
Q 011641 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTT-NLWSAELSKLA--ANAFLAQRISSVNAMS 234 (480)
Q Consensus 158 ~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~-~~~~ae~~Kl~--~N~~~~~~ia~~nE~~ 234 (480)
....|. ..++.|+. .+++..+.++++|+.++ ..++.. +-.-..++-+. .+.+. ..++..+.
T Consensus 116 ~~~~g~--------~~i~~~~~---~~~~~~~~~~~l~~~~g--~~~~~~~~~~~~~~~al~g~~~~~~---~~~~~~l~ 179 (263)
T 1yqg_A 116 KIGLGV--------SGMYAEAE---VSETDRRIADRIMKSVG--LTVWLDDEEKMHGITGISGSGPAYV---FYLLDALQ 179 (263)
T ss_dssp GGTCEE--------EEEECCTT---SCHHHHHHHHHHHHTTE--EEEECSSTTHHHHHHHHTTSHHHHH---HHHHHHHH
T ss_pred HHcCce--------EEEEcCCC---CCHHHHHHHHHHHHhCC--CEEEeCChhhccHHHHHHccHHHHH---HHHHHHHH
Confidence 222221 12333331 24778899999999875 344443 21111122221 22232 33444445
Q ss_pred HHHHHhCCCHHHHHHHhc
Q 011641 235 ALCEATGANVSQVAFAVG 252 (480)
Q Consensus 235 ~l~~~~Gid~~~v~~~~~ 252 (480)
..+++.|++.+++.+.+.
T Consensus 180 e~~~~~G~~~~~~~~~~~ 197 (263)
T 1yqg_A 180 NAAIRQGFDMAEARALSL 197 (263)
T ss_dssp HHHHHTTCCHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHH
Confidence 558899999988887764
No 79
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=99.49 E-value=2.6e-12 Score=132.16 Aligned_cols=219 Identities=16% Similarity=0.116 Sum_probs=131.3
Q ss_pred CcEEEEECCChhHHHHHHHHHH-cCCCCeEEEEE---CCHHHHHH-HHcCCCCC--cCCChHHHHhhhcCCCEE-EecCH
Q 011641 1 MVKICCIGAGYVGGPTMAVIAL-KCPSIEVAVVD---ISVSRINA-WNSDQLPI--YEPGLDGVVKQCRGKNLF-FSTDV 72 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~-~~~G~~V~~~D---~~~~~v~~-l~~~~~~~--~e~~l~~~~~~~~~~~l~-~t~d~ 72 (480)
||||+|||+|+||+.+|..|++ + |++|++|| +++++++. ++++...+ .+++.+.. . ...++. +++|+
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~--G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~-~--~~~~~~~~~~~~ 76 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRD--GVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQT-E--VKSRPKVITKDP 76 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTST--TEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEE-E--EEECCSEEESCH
T ss_pred CceEEEECCCHHHHHHHHHHHhCC--CCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccc-e--eeccceEEeCCH
Confidence 5899999999999999999987 5 89999999 88888888 45443111 11111000 0 001233 78899
Q ss_pred HHhhccCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCce-E
Q 011641 73 EKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKF-Q 151 (480)
Q Consensus 73 ~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~-~ 151 (480)
+++++++|+||+|||++. +.++++++.+.++++++|+.. +...|......+.+.+.....-+ .
T Consensus 77 ~~a~~~aD~Vilav~~~~---------------~~~v~~~l~~~l~~~~ivv~~-~~~~G~~~~~~~~l~~~~~~~v~~~ 140 (404)
T 3c7a_A 77 EIAISGADVVILTVPAFA---------------HEGYFQAMAPYVQDSALIVGL-PSQAGFEFQCRDILGDKAAAVSMMS 140 (404)
T ss_dssp HHHHTTCSEEEECSCGGG---------------HHHHHHHHTTTCCTTCEEEET-TCCTTHHHHHHHHHGGGGGTSEEEE
T ss_pred HHHhCCCCEEEEeCchHH---------------HHHHHHHHHhhCCCCcEEEEc-CCCccHHHHHHHHHHhcCCCeEEEE
Confidence 888899999999998642 467889999999988887753 22235333333445432111101 1
Q ss_pred EeeCCcc---ccccccccccCCCCeEEEecCCC--cchHHHHHHHHHHHhccCCCC-eEEeCCchhHHHh----------
Q 011641 152 ILSNPEF---LAEGTAIQDLFNPDRVLIGGRET--PEGQKAVKALKDVYAHWVPED-RILTTNLWSAELS---------- 215 (480)
Q Consensus 152 v~~~Pe~---~~~G~a~~~~~~~~~vviG~~~~--~~~~~~~e~~~~l~~~~~~~~-~v~~~~~~~ae~~---------- 215 (480)
+...|.. ..||.+........++.+|.... ...++..+.++++|.. . .....|+...++.
T Consensus 141 ~~~~~~~~~~~gpg~~v~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~di~~~~l~~N~~~~~~~~ 216 (404)
T 3c7a_A 141 FETLPWACRIKEFGRKVEVLGTKSVLAASLIKGTAKTVDPLSTLQMLHGAE----PVFRLAKHFLEMLIMSYSFVHPAIL 216 (404)
T ss_dssp ESSCSEEEEEEETTTEEEEEEECSEEEEEEECCSSCCSCHHHHHHHHHCSS----SEEEECSCHHHHHHTTCTTHHHHHH
T ss_pred ecCchHhhcccCCCcEEEEEEECceEEEEEccCCcchHHHHHHHHHHhCCC----CceeEcCCEeeeeecCCceeccHHH
Confidence 1123322 34675544444444666675422 2234455556665541 1 1122333211111
Q ss_pred --------h--------hhHh---HHHHHHHHHHHHHHHHHHHh-----CCCH
Q 011641 216 --------K--------LAAN---AFLAQRISSVNAMSALCEAT-----GANV 244 (480)
Q Consensus 216 --------K--------l~~N---~~~~~~ia~~nE~~~l~~~~-----Gid~ 244 (480)
. +..| ..+.+..+++.|+..+++++ |++.
T Consensus 217 l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~E~~~va~a~~~~~~G~~~ 269 (404)
T 3c7a_A 217 FGRWGSWDGKPVPEAPLFYQGIDQATADMLTACSNECKDVANAIMAACPGNDL 269 (404)
T ss_dssp HHHHTTCCSCCBSSCCBSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHSTTCCC
T ss_pred HHHHHhhhcCCCCCCCccccCCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCc
Confidence 1 3343 56678889999999999999 9886
No 80
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.44 E-value=7.4e-13 Score=123.91 Aligned_cols=155 Identities=17% Similarity=0.140 Sum_probs=106.7
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+|||+|||+|.||.++|..|+++ |++|++||++++ ++++||
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~--g~~V~~~~~~~~-------------------------------------~~~~aD 59 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIA--GHEVTYYGSKDQ-------------------------------------ATTLGE 59 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--TCEEEEECTTCC-------------------------------------CSSCCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHH-------------------------------------HhccCC
Confidence 48999999999999999999998 999999998642 256899
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecC-CC-cc-------h----HHHHHHHHHhcCCC
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST-VP-VK-------T----AEAIEKILTHNSKG 147 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST-v~-~g-------t----~~~l~~~l~~~~~g 147 (480)
+||+|+|+ ..++++++++.+.++ +++|+..|+ ++ ++ + .+.+++.+..
T Consensus 60 ~vi~av~~---------------~~~~~v~~~l~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~~---- 119 (209)
T 2raf_A 60 IVIMAVPY---------------PALAALAKQYATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLPD---- 119 (209)
T ss_dssp EEEECSCH---------------HHHHHHHHHTHHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCTT----
T ss_pred EEEEcCCc---------------HHHHHHHHHHHHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHHHCCC----
Confidence 99999983 235677888888888 888887766 33 12 3 3444444321
Q ss_pred Cce----EEeeCCccccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHH
Q 011641 148 IKF----QILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAF 222 (480)
Q Consensus 148 ~~~----~v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~ 222 (480)
..+ ...++|.+..+... + ..+..+++++. +++..+.++++|+.++ ...+..++++.+.++|.+.|..
T Consensus 120 ~~vv~~~~~~~~p~~~~~~~~--g-~~~~~~~~~g~----~~~~~~~v~~ll~~~G-~~~~~~~~i~~a~~~K~i~~l~ 190 (209)
T 2raf_A 120 SQVLKAFNTTFAATLQSGQVN--G-KEPTTVLVAGN----DDSAKQRFTRALADSP-LEVKDAGKLKRARELEAMGFMQ 190 (209)
T ss_dssp SEEEECSTTSCHHHHHHSEET--T-TEECEEEEEES----CHHHHHHHHHHTTTSS-CEEEEEESGGGHHHHHHHHHHH
T ss_pred CcEEEeeecccHhhccccccC--C-CCCceeEEcCC----CHHHHHHHHHHHHHcC-CceEeCCCHhHHHHhcchHHHH
Confidence 111 11225655443221 1 01224556765 4688999999999986 2456677899999999887753
No 81
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=99.41 E-value=1.4e-12 Score=128.55 Aligned_cols=192 Identities=13% Similarity=0.139 Sum_probs=123.5
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhh-ccCc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV-SEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~-~~aD 80 (480)
|||+|||+|.||+.+|..|+++ |++|++|+++++.++.... .+. .....+.+..+++ ..+|
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~-------~g~---------~~~~~~~~~~~~~~~~~D 64 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQS--LPHTTLIGRHAKTITYYTV-------PHA---------PAQDIVVKGYEDVTNTFD 64 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH--CTTCEEEESSCEEEEEESS-------TTS---------CCEEEEEEEGGGCCSCEE
T ss_pred cEEEEECCCHHHHHHHHHHHHC--CCeEEEEEeccCcEEEEec-------CCe---------eccceecCchHhcCCCCC
Confidence 8999999999999999999998 8999999998654321110 010 0122333444444 7899
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCC--CCceEEeeCCcc
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSK--GIKFQILSNPEF 158 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~--g~~~~v~~~Pe~ 158 (480)
+||+|||+. .+.++++.+.+.++++++|+... ...+..+. +..... +. +..+-.+
T Consensus 65 ~vilavk~~---------------~~~~~l~~l~~~l~~~~~iv~~~-nGi~~~~~----~~~~~v~~g~---~~~~a~~ 121 (294)
T 3g17_A 65 VIIIAVKTH---------------QLDAVIPHLTYLAHEDTLIILAQ-NGYGQLEH----IPFKNVCQAV---VYISGQK 121 (294)
T ss_dssp EEEECSCGG---------------GHHHHGGGHHHHEEEEEEEEECC-SSCCCGGG----CCCSCEEECE---EEEEEEE
T ss_pred EEEEeCCcc---------------CHHHHHHHHHHhhCCCCEEEEec-cCcccHhh----CCCCcEEEEE---EEEEEEE
Confidence 999999842 25778889999988887766432 22333222 221110 10 1111123
Q ss_pred ccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhH-----------------
Q 011641 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANA----------------- 221 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~----------------- 221 (480)
..||..... +.++.+|. .+..+.+.++|+.-+ .......|+...+|.|++.|+
T Consensus 122 ~~pg~v~~~---~~~~~~~~------~~~~~~l~~~l~~~~-~~~~~~~di~~~~w~Kl~~N~~inl~al~~~~~g~~l~ 191 (294)
T 3g17_A 122 KGDVVTHFR---DYQLRIQD------NALTRQFRDLVQDSQ-IDIVLEANIQQAIWYKLLVNLGINSITALGRQTVAIMH 191 (294)
T ss_dssp ETTEEEEEE---EEEEEEEC------SHHHHHHHHHTTTSS-CEEEEESSHHHHHHHHHHHHHHHHHHHHHHTSCGGGGG
T ss_pred cCCCEEEEC---CCEEecCc------cHHHHHHHHHHHhCC-CceEEChHHHHHHHHHHHHHHHHHHHHHHCCChHHHHc
Confidence 445554221 34555542 346778888998754 234456799999999999887
Q ss_pred ---HHHHHHHHHHHHHHHHHHhCCCH
Q 011641 222 ---FLAQRISSVNAMSALCEATGANV 244 (480)
Q Consensus 222 ---~~~~~ia~~nE~~~l~~~~Gid~ 244 (480)
.+.+....+.|+..++++.|++.
T Consensus 192 ~~~~~~l~~~~~~E~~~va~a~G~~l 217 (294)
T 3g17_A 192 NPEIRILCRQLLLDGCRVAQAEGLNF 217 (294)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 34555678999999999999863
No 82
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=99.39 E-value=2e-12 Score=141.64 Aligned_cols=204 Identities=16% Similarity=0.159 Sum_probs=140.1
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhh-------hcCCCEEEecCHH
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ-------CRGKNLFFSTDVE 73 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~-------~~~~~l~~t~d~~ 73 (480)
+.||+|||+|.||..+|..++.+ |++|+++|++++.++...+... ..++..... ....+++.+++.+
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~a--G~~V~l~D~~~~~l~~~~~~i~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARV--GISVVAVESDPKQLDAAKKIIT----FTLEKEASRAHQNGQASAKPKLRFSSSTK 389 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHH----HHHHHHHHHHHTTTCCCCCCCEEEESCGG
T ss_pred ccEEEEEcccHHHHHHHHHHHhC--CCchhcccchHhhhhhHHHHHH----HHHHHHHHhccccchhhhhhhhcccCcHH
Confidence 46899999999999999999998 9999999999987665432100 001111110 1224678899987
Q ss_pred HhhccCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEE-EEecCCCcchHHHHHHHHHhcCC--CCce
Q 011641 74 KHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIV-VEKSTVPVKTAEAIEKILTHNSK--GIKF 150 (480)
Q Consensus 74 ~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iV-i~~STv~~gt~~~l~~~l~~~~~--g~~~ 150 (480)
+ +++||+||.||+.. .+++ +++++++.+++++++|+ .+.||+++.. +...+..... |.+|
T Consensus 390 ~-l~~aDlVIEAV~E~-----------l~iK--~~vf~~le~~~~~~aIlASNTSsl~i~~---ia~~~~~p~r~ig~HF 452 (742)
T 3zwc_A 390 E-LSTVDLVVEAVFED-----------MNLK--KKVFAELSALCKPGAFLCTNTSALNVDD---IASSTDRPQLVIGTHF 452 (742)
T ss_dssp G-GGSCSEEEECCCSC-----------HHHH--HHHHHHHHHHSCTTCEEEECCSSSCHHH---HHTTSSCGGGEEEEEC
T ss_pred H-HhhCCEEEEecccc-----------HHHH--HHHHHHHhhcCCCCceEEecCCcCChHH---HHhhcCCccccccccc
Confidence 6 89999999999853 3444 78999999999999988 4556676543 2211111110 2222
Q ss_pred EEeeCCccccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhHHHHHHHHHH
Q 011641 151 QILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSV 230 (480)
Q Consensus 151 ~v~~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~~~~~~ia~~ 230 (480)
|+|....+- ..||-|.. + ++++++.+..+.+.+++ .++.+.| ...++.| .+...++
T Consensus 453 ---fnP~~~m~L---------VEvi~g~~-T--s~e~~~~~~~~~~~lgK-~pV~vkd-----~pGFi~N---Ri~~~~~ 508 (742)
T 3zwc_A 453 ---FSPAHVMRL---------LEVIPSRY-S--SPTTIATVMSLSKKIGK-IGVVVGN-----CYGFVGN---RMLAPYY 508 (742)
T ss_dssp ---CSSTTTCCE---------EEEEECSS-C--CHHHHHHHHHHHHHTTC-EEEECCC-----STTTTHH---HHHHHHH
T ss_pred ---cCCCCCCce---------EEEecCCC-C--CHHHHHHHHHHHHHhCC-CCcccCC-----CCCccHH---HHhhHHH
Confidence 456544331 13555443 3 78999999999999874 4555543 3357888 5778999
Q ss_pred HHHHHHHHHhCCCHHHHHHHhc
Q 011641 231 NAMSALCEATGANVSQVAFAVG 252 (480)
Q Consensus 231 nE~~~l~~~~Gid~~~v~~~~~ 252 (480)
+|...+.++ |+++.++.+++.
T Consensus 509 ~ea~~l~~e-G~~~~~id~a~~ 529 (742)
T 3zwc_A 509 NQGFFLLEE-GSKPEDVDGVLE 529 (742)
T ss_dssp HHHHHHHHT-TCCHHHHHHHHH
T ss_pred HHHHHHHHc-CCCHHHHHHHHH
Confidence 999999876 799999998874
No 83
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.38 E-value=6.5e-13 Score=125.29 Aligned_cols=165 Identities=15% Similarity=0.183 Sum_probs=104.8
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEE-EECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccC
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAV-VDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~-~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
||||+|||+|+||.++|..|+++ |++|++ +|+++++++.+.+.. +....+++ .++++++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~--g~~V~~v~~r~~~~~~~l~~~~-----------------g~~~~~~~-~~~~~~a 82 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAA--QIPAIIANSRGPASLSSVTDRF-----------------GASVKAVE-LKDALQA 82 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHT--TCCEEEECTTCGGGGHHHHHHH-----------------TTTEEECC-HHHHTTS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEECCCHHHHHHHHHHh-----------------CCCcccCh-HHHHhcC
Confidence 57999999999999999999998 999999 999999888876420 11122334 4458999
Q ss_pred cEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcc-------------hHHHHHHHHHhcCC
Q 011641 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVK-------------TAEAIEKILTHNSK 146 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~g-------------t~~~l~~~l~~~~~ 146 (480)
|+||+|||.. .+.++++++.+ + ++++|+..++ +.+ +.+.+++.+...
T Consensus 83 DvVilavp~~---------------~~~~v~~~l~~-~-~~~ivi~~~~-g~~~~~~~~~~~~~~~~~~~l~~~l~~~-- 142 (220)
T 4huj_A 83 DVVILAVPYD---------------SIADIVTQVSD-W-GGQIVVDASN-AIDFPAFKPRDLGGRLSTEIVSELVPGA-- 142 (220)
T ss_dssp SEEEEESCGG---------------GHHHHHTTCSC-C-TTCEEEECCC-CBCTTTCCBCCCTTCCHHHHHHHHSTTC--
T ss_pred CEEEEeCChH---------------HHHHHHHHhhc-c-CCCEEEEcCC-CCCcccccccccCCCcHHHHHHHHCCCC--
Confidence 9999999732 24667777766 4 4777766543 222 455666555421
Q ss_pred CCceEEee--CCc-cccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHH
Q 011641 147 GIKFQILS--NPE-FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAEL 214 (480)
Q Consensus 147 g~~~~v~~--~Pe-~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~ 214 (480)
.+.-++ .|. ....|..... .+..+++++. ++++.+.++++|+.++ ..++..++++.|.+
T Consensus 143 --~vv~~~~~~~~~v~~~g~~~~~--~~~~v~~~g~----~~~~~~~v~~l~~~~G-~~~~~~G~l~~a~~ 204 (220)
T 4huj_A 143 --KVVKAFNTLPAAVLAADPDKGT--GSRVLFLSGN----HSDANRQVAELISSLG-FAPVDLGTLAASGP 204 (220)
T ss_dssp --EEEEESCSSCHHHHTSCSBCSS--CEEEEEEEES----CHHHHHHHHHHHHHTT-CEEEECCSHHHHHH
T ss_pred --CEEECCCCCCHHHhhhCcccCC--CCeeEEEeCC----CHHHHHHHHHHHHHhC-CCeEeeCChhhcch
Confidence 111111 111 1111211111 1234556665 4789999999999986 34566677766644
No 84
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.30 E-value=2.5e-11 Score=113.91 Aligned_cols=172 Identities=16% Similarity=0.072 Sum_probs=105.0
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+|||+|||+|.||..+|..|++. |++|+++|+++++.+.+.+. +++.+ +.+++++++|
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~-------------------g~~~~-~~~~~~~~~D 85 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGS--GFKVVVGSRNPKRTARLFPS-------------------AAQVT-FQEEAVSSPE 85 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHT--TCCEEEEESSHHHHHHHSBT-------------------TSEEE-EHHHHTTSCS
T ss_pred CCEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc-------------------CCcee-cHHHHHhCCC
Confidence 47899999999999999999998 89999999999988877542 13334 6677789999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCc-chHH---HHHHHHHhcCCCCceEEeeCC
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPV-KTAE---AIEKILTHNSKGIKFQILSNP 156 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~-gt~~---~l~~~l~~~~~g~~~~v~~~P 156 (480)
+||+|+|.. .. ..+++ +.+.+ ++++|+..|+..+ .+.+ ...+.+.+..++..+.-.+++
T Consensus 86 vVi~av~~~-~~--------------~~v~~-l~~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~l~~~~vv~~~n~ 148 (215)
T 2vns_A 86 VIFVAVFRE-HY--------------SSLCS-LSDQL-AGKILVDVSNPTEQEHLQHRESNAEYLASLFPTCTVVKAFNV 148 (215)
T ss_dssp EEEECSCGG-GS--------------GGGGG-GHHHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHHHCTTSEEEEECTT
T ss_pred EEEECCChH-HH--------------HHHHH-HHHhc-CCCEEEEeCCCcccccccccccHHHHHHHHCCCCeEEecccc
Confidence 999999842 11 12222 44445 6788887766533 2111 112233332111111111222
Q ss_pred ccc---cccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHh
Q 011641 157 EFL---AEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAAN 220 (480)
Q Consensus 157 e~~---~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N 220 (480)
... .++.. . .....++.|+ +++..+.++++|+.++. ..+..++++.|..++.+.+
T Consensus 149 ~~~~~~~~~~~-~--g~~~~~~~g~-----~~~~~~~v~~ll~~~G~-~~~~~g~~~~~~~~e~~~~ 206 (215)
T 2vns_A 149 ISAWTLQAGPR-D--GNRQVPICGD-----QPEAKRAVSEMALAMGF-MPVDMGSLASAWEVEAMPL 206 (215)
T ss_dssp BCHHHHHTCSC-S--SCCEEEEEES-----CHHHHHHHHHHHHHTTC-EEEECCSGGGHHHHHHSCC
T ss_pred ccHhHhccccc-C--CceeEEEecC-----CHHHHHHHHHHHHHcCC-ceEeecchhhhhHhhhhhh
Confidence 111 12211 1 1112344443 37889999999999863 4566678888877764433
No 85
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.27 E-value=2.1e-11 Score=122.43 Aligned_cols=195 Identities=16% Similarity=0.132 Sum_probs=117.0
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHH-HHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccC
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSR-INAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~-v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
.|||+|||+|.||.++|..|++. |++|+++|+++++ .+...+. ++..+ ++++++++|
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~--G~~V~~~~~~~~~~~~~a~~~-------------------G~~~~-~~~e~~~~a 73 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDS--GVDVTVGLRSGSATVAKAEAH-------------------GLKVA-DVKTAVAAA 73 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHT--TCCEEEECCTTCHHHHHHHHT-------------------TCEEE-CHHHHHHTC
T ss_pred CCEEEEECchHHHHHHHHHHHHC--cCEEEEEECChHHHHHHHHHC-------------------CCEEc-cHHHHHhcC
Confidence 37899999999999999999998 8999999998765 3333321 23445 777888999
Q ss_pred cEEEEeccCCCCCCCCCCCCCCChHHHHHHHH-HHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcC-C-CCceEEeeCC
Q 011641 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAAR-VIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNS-K-GIKFQILSNP 156 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~-~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~-~-g~~~~v~~~P 156 (480)
|+||+|||.. ...++++ ++.+.++++++|++.+++ ... ++... . +.+| +..+|
T Consensus 74 DvVilavp~~---------------~~~~v~~~~i~~~l~~~~ivi~~~gv----~~~----~~~~~~~~~~~v-v~~~P 129 (338)
T 1np3_A 74 DVVMILTPDE---------------FQGRLYKEEIEPNLKKGATLAFAHGF----SIH----YNQVVPRADLDV-IMIAP 129 (338)
T ss_dssp SEEEECSCHH---------------HHHHHHHHHTGGGCCTTCEEEESCCH----HHH----TTSSCCCTTCEE-EEEEE
T ss_pred CEEEEeCCcH---------------HHHHHHHHHHHhhCCCCCEEEEcCCc----hhH----HHhhcCCCCcEE-EeccC
Confidence 9999999842 2356777 888899999988865432 111 11111 1 2333 34456
Q ss_pred ccccccccccccC----CCCeEEE-ecCCCcchHHHHHHHHHHHhccCCCCe--EEeCCch-hHHHhhhhHhH-HHHHHH
Q 011641 157 EFLAEGTAIQDLF----NPDRVLI-GGRETPEGQKAVKALKDVYAHWVPEDR--ILTTNLW-SAELSKLAANA-FLAQRI 227 (480)
Q Consensus 157 e~~~~G~a~~~~~----~~~~vvi-G~~~~~~~~~~~e~~~~l~~~~~~~~~--v~~~~~~-~ae~~Kl~~N~-~~~~~i 227 (480)
..|+.+...++ ..+.++. +.. .++++.+.+.++++.++. .+ +..++.. ..+...+.+++ +....-
T Consensus 130 --~gp~~a~~~l~~~G~g~~~ii~~~~~---~~~~a~~~~~~l~~~lG~-~~agv~~~~~~~~~~~~~~~s~~~l~G~lp 203 (338)
T 1np3_A 130 --KAPGHTVRSEFVKGGGIPDLIAIYQD---ASGNAKNVALSYACGVGG-GRTGIIETTFKDETETDLFGEQAVLCGGCV 203 (338)
T ss_dssp --SSCSHHHHHHHHTTCCCCEEEEEEEC---SSSCHHHHHHHHHHHTTH-HHHCEEECCHHHHHHHHHHHHHHTTTHHHH
T ss_pred --CCCchhHHHHHhccCCCeEEEEecCC---CCHHHHHHHHHHHHHcCC-CccceEeechhcccchHHHHHHHHHhhhHH
Confidence 34554433322 2223322 221 135678889999998852 13 5555543 44555555541 111122
Q ss_pred HHHHHHHHHHHHhCCCHHHH
Q 011641 228 SSVNAMSALCEATGANVSQV 247 (480)
Q Consensus 228 a~~nE~~~l~~~~Gid~~~v 247 (480)
+++........+.|+++++.
T Consensus 204 ~~ia~~~e~l~~~Gl~~~~a 223 (338)
T 1np3_A 204 ELVKAGFETLVEAGYAPEMA 223 (338)
T ss_dssp HHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHH
Confidence 23333333334678876543
No 86
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=99.24 E-value=2.1e-11 Score=120.76 Aligned_cols=203 Identities=15% Similarity=0.098 Sum_probs=118.9
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+|||+|||+|.||+.+|..|+ + |++|++|++++++++.+++.+..+..++.. .. ..+..+ .++...+|
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~--g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~-~~-----~~~~~~---~~~~~~~D 69 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-L--YHDVTVVTRRQEQAAAIQSEGIRLYKGGEE-FR-----ADCSAD---TSINSDFD 69 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T--TSEEEEECSCHHHHHHHHHHCEEEEETTEE-EE-----ECCEEE---SSCCSCCS
T ss_pred CCEEEEECCCHHHHHHHHHHh-c--CCceEEEECCHHHHHHHHhCCceEecCCCe-ec-----cccccc---ccccCCCC
Confidence 389999999999999999999 8 999999999999998887643222211110 00 011221 12467899
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEee-CCccc
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILS-NPEFL 159 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~-~Pe~~ 159 (480)
+||+|||+. .+.++++.+.+. .+++ |+. -....+..+.+.+.+.... .-..+.+ +-.+.
T Consensus 70 ~vilavK~~---------------~~~~~l~~l~~~-~~~~-ivs-~~nGi~~~e~l~~~~~~~~--vl~g~~~~~a~~~ 129 (307)
T 3ego_A 70 LLVVTVKQH---------------QLQSVFSSLERI-GKTN-ILF-LQNGMGHIHDLKDWHVGHS--IYVGIVEHGAVRK 129 (307)
T ss_dssp EEEECCCGG---------------GHHHHHHHTTSS-CCCE-EEE-CCSSSHHHHHHHTCCCSCE--EEEEEECCEEEEC
T ss_pred EEEEEeCHH---------------HHHHHHHHhhcC-CCCe-EEE-ecCCccHHHHHHHhCCCCc--EEEEEEeeceEEC
Confidence 999999842 246777777764 5555 432 2333343333332222110 0011222 22344
Q ss_pred cccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhhHhH------------------
Q 011641 160 AEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANA------------------ 221 (480)
Q Consensus 160 ~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~~N~------------------ 221 (480)
.||...+... .++.+|..+.. .+..+.+.++|...+ .......|+....|.|++-|+
T Consensus 130 ~pg~v~~~~~--g~~~iG~~~~~--~~~~~~l~~~l~~ag-~~~~~~~di~~~~W~Kl~~N~~~N~ltal~~~~~g~l~~ 204 (307)
T 3ego_A 130 SDTAVDHTGL--GAIKWSAFDDA--EPDRLNILFQHNHSD-FPIYYETDWYRLLTGKLIVNACINPLTALLQVKNGELLT 204 (307)
T ss_dssp SSSEEEEEEC--CCEEEEECTTC--CGGGGTTTTSSCCTT-SCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHH
T ss_pred CCCEEEEeee--eeEEEEeCCCC--cHHHHHHHHHhhhCC-CCcEechhHHHHHHHHHHHhhhhhHHHHHhcCCcchhhc
Confidence 5676544332 35678875322 122333334444322 123455799999999999986
Q ss_pred ---HHHHHHHHHHHHHHHHHHh
Q 011641 222 ---FLAQRISSVNAMSALCEAT 240 (480)
Q Consensus 222 ---~~~~~ia~~nE~~~l~~~~ 240 (480)
.+.+....+.|+..+++..
T Consensus 205 ~~~~~~l~~~l~~E~~~va~~~ 226 (307)
T 3ego_A 205 TPAYLAFMKLVFQEACRILKLE 226 (307)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCS
T ss_pred ChhHHHHHHHHHHHHHHHHhcc
Confidence 2445567788888887654
No 87
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.23 E-value=8e-12 Score=121.87 Aligned_cols=183 Identities=13% Similarity=0.118 Sum_probs=105.1
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeE-EEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccC
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEV-AVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
||||+|||+|.||.++|..|+++ ++| .+||+++++.+.+.+.. +. .+++++++++++
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~~---~~v~~v~~~~~~~~~~~~~~~-----------------g~--~~~~~~~~~~~~ 59 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKDR---YEIGYILSRSIDRARNLAEVY-----------------GG--KAATLEKHPELN 59 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC-------CCCEECSSHHHHHHHHHHT-----------------CC--CCCSSCCCCC--
T ss_pred CceEEEEeCCHHHHHHHHHHHHc---CcEEEEEeCCHHHHHHHHHHc-----------------CC--ccCCHHHHHhcC
Confidence 47999999999999999999864 688 59999999988776410 11 345566667889
Q ss_pred cEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCccc
Q 011641 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFL 159 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (480)
|+||+|||... +.++++++. +++++|+..|+..+... +++. +.....|...
T Consensus 60 DvVilav~~~~---------------~~~v~~~l~---~~~~ivi~~s~~~~~~~------l~~~-----~~~~~~p~~~ 110 (276)
T 2i76_A 60 GVVFVIVPDRY---------------IKTVANHLN---LGDAVLVHCSGFLSSEI------FKKS-----GRASIHPNFS 110 (276)
T ss_dssp -CEEECSCTTT---------------HHHHHTTTC---CSSCCEEECCSSSCGGG------GCSS-----SEEEEEECSC
T ss_pred CEEEEeCChHH---------------HHHHHHHhc---cCCCEEEECCCCCcHHH------HHHh-----hccccchhhh
Confidence 99999998531 244555443 56788887775433221 1111 1122333332
Q ss_pred ccc--ccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchh---HHHhhhhHhHHHHHHHHHHHHHH
Q 011641 160 AEG--TAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWS---AELSKLAANAFLAQRISSVNAMS 234 (480)
Q Consensus 160 ~~G--~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~---ae~~Kl~~N~~~~~~ia~~nE~~ 234 (480)
.+| .....+...+ +++++. ++..+.++++++.++. .++....... ....+++.|... .+++|+.
T Consensus 111 ~~g~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~l~~~lG~-~~~~v~~~~~~~~~~~~~l~~n~~~----~~~~~a~ 179 (276)
T 2i76_A 111 FSSLEKALEMKDQIV-FGLEGD-----ERGLPIVKKIAEEISG-KYFVIPSEKKKAYHLAAVIASNFPV----ALAYLSK 179 (276)
T ss_dssp C--CTTGGGCGGGCC-EEECCC-----TTTHHHHHHHHHHHCS-CEEECCGGGHHHHHHHHHHHHTTHH----HHHHHHH
T ss_pred cCCCchhHHHhCCCe-EEEEeC-----hHHHHHHHHHHHHhCC-CEEEECHHHHHHHHHHHHHHHHHHH----HHHHHHH
Confidence 222 1111122222 344554 3458889999999863 3444432221 233477777332 3557777
Q ss_pred HHHHHhCCCHH
Q 011641 235 ALCEATGANVS 245 (480)
Q Consensus 235 ~l~~~~Gid~~ 245 (480)
.++++.|++..
T Consensus 180 ~~~~~~Gl~~~ 190 (276)
T 2i76_A 180 RIYTLLGLDEP 190 (276)
T ss_dssp HHHHTTTCSCH
T ss_pred HHHHHcCCChH
Confidence 89999999876
No 88
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=99.21 E-value=1.1e-10 Score=116.88 Aligned_cols=134 Identities=14% Similarity=0.201 Sum_probs=95.5
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|+|+|||+|.||..+|..|+.. |++|++||+++++.+...+. ++..+ ++++++++||+
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~-------------------g~~~~-~l~e~l~~aDv 213 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPF--GVQRFLYTGRQPRPEEAAEF-------------------QAEFV-STPELAAQSDF 213 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG--TCCEEEEESSSCCHHHHHTT-------------------TCEEC-CHHHHHHHCSE
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCEEEEECCCCcchhHHHhc-------------------CceeC-CHHHHHhhCCE
Confidence 6899999999999999999987 99999999987655544321 23444 77888899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCC---CCceEEeeCCcc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSK---GIKFQILSNPEF 158 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~---g~~~~v~~~Pe~ 158 (480)
|++|+|.+....+ ..+ +.+.+.++++.++|+.|+.++..++.+.+.+++... +.++ +.||.
T Consensus 214 Vi~~vp~~~~t~~-----~i~--------~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv---~~~ep 277 (330)
T 2gcg_A 214 IVVACSLTPATEG-----LCN--------KDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDV---TSPEP 277 (330)
T ss_dssp EEECCCCCTTTTT-----CBS--------HHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESC---CSSSS
T ss_pred EEEeCCCChHHHH-----hhC--------HHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCccEEEeCC---CCCCC
Confidence 9999986532211 111 345567889999999999988888888888876431 2333 57776
Q ss_pred ccccccccccCCCCeEEE
Q 011641 159 LAEGTAIQDLFNPDRVLI 176 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vvi 176 (480)
..+++.+ +..+.+++
T Consensus 278 l~~~~~l---~~~~nvi~ 292 (330)
T 2gcg_A 278 LPTNHPL---LTLKNCVI 292 (330)
T ss_dssp CCTTCGG---GGCTTEEE
T ss_pred CCCCChh---hcCCCEEE
Confidence 5555443 34455665
No 89
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=99.18 E-value=8.2e-11 Score=117.87 Aligned_cols=132 Identities=19% Similarity=0.175 Sum_probs=93.8
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|+|+|||+|.||..+|..|+.. |++|++||++++. +...+. ++.. +++++++++||+
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~--G~~V~~~d~~~~~-~~~~~~-------------------g~~~-~~l~~~l~~aDv 207 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGF--NMRILYYSRTRKE-EVEREL-------------------NAEF-KPLEDLLRESDF 207 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCH-HHHHHH-------------------CCEE-CCHHHHHHHCSE
T ss_pred CEEEEEccCHHHHHHHHHHHhC--CCEEEEECCCcch-hhHhhc-------------------Cccc-CCHHHHHhhCCE
Confidence 6899999999999999999987 9999999998876 333210 1233 477888899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCC---CCceEEeeCCcc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSK---GIKFQILSNPEF 158 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~---g~~~~v~~~Pe~ 158 (480)
|++|+|.+.... .+. .+.+.+.+++++++|+.|+.++...+.+.+.+++... +.|+ +.||.
T Consensus 208 Vil~vp~~~~t~-----------~~i--~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv---~~~EP 271 (334)
T 2dbq_A 208 VVLAVPLTRETY-----------HLI--NEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDV---FEEEP 271 (334)
T ss_dssp EEECCCCCTTTT-----------TCB--CHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESC---CSSSS
T ss_pred EEECCCCChHHH-----------Hhh--CHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEecC---CCCCC
Confidence 999998754221 111 1345667889999999999888888888888876321 2332 56663
Q ss_pred ccccccccccCCCCeEEE
Q 011641 159 LAEGTAIQDLFNPDRVLI 176 (480)
Q Consensus 159 ~~~G~a~~~~~~~~~vvi 176 (480)
.+...++..+++++
T Consensus 272 ----~~~~~L~~~~~vi~ 285 (334)
T 2dbq_A 272 ----YYNEELFKLDNVVL 285 (334)
T ss_dssp ----CCCHHHHHCTTEEE
T ss_pred ----CCCchhhcCCCEEE
Confidence 23345555666766
No 90
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.15 E-value=8.5e-10 Score=104.08 Aligned_cols=155 Identities=9% Similarity=0.047 Sum_probs=100.4
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.|||+|||+|.||.+||..|.++ ||+|++||+. ++ +++||
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~--G~~V~~~~~~-------------------------------------~~-~~~aD 45 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSV--GHYVTVLHAP-------------------------------------ED-IRDFE 45 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHT--TCEEEECSSG-------------------------------------GG-GGGCS
T ss_pred CcEEEEEeeCHHHHHHHHHHHHC--CCEEEEecCH-------------------------------------HH-hccCC
Confidence 38999999999999999999998 9999999872 11 46788
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCC-CcchHHHHHHHHHhcCCCCceEEeeCCccc
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTV-PVKTAEAIEKILTHNSKGIKFQILSNPEFL 159 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv-~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (480)
|+|||.. .+.++++++.+.++++++|++.|+. +....+.+ ...+ . .++..+|-+.
T Consensus 46 --ilavP~~---------------ai~~vl~~l~~~l~~g~ivvd~sgs~~~~vl~~~----~~~g--~-~fvg~HPm~g 101 (232)
T 3dfu_A 46 --LVVIDAH---------------GVEGYVEKLSAFARRGQMFLHTSLTHGITVMDPL----ETSG--G-IVMSAHPIGQ 101 (232)
T ss_dssp --EEEECSS---------------CHHHHHHHHHTTCCTTCEEEECCSSCCGGGGHHH----HHTT--C-EEEEEEEEET
T ss_pred --EEEEcHH---------------HHHHHHHHHHHhcCCCCEEEEECCcCHHHHHHHH----HhCC--C-cEEEeeeCCC
Confidence 9998853 2577889999999999999987543 33322222 2222 2 3566677642
Q ss_pred cccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhh-hHhHHHHHHHHHHHHHHHHHH
Q 011641 160 AEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKL-AANAFLAQRISSVNAMSALCE 238 (480)
Q Consensus 160 ~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl-~~N~~~~~~ia~~nE~~~l~~ 238 (480)
. +.++.++ +++..+.++++++.++ ..+..++.+. -.++ +.-...-..++++++..++.+
T Consensus 102 ~-----------~~~i~a~-----d~~a~~~l~~L~~~lG--~~vv~~~~~~--hd~~~AAvsh~nhLv~L~~~A~~ll~ 161 (232)
T 3dfu_A 102 D-----------RWVASAL-----DELGETIVGLLVGELG--GSIVEIADDK--RAQLAAALTYAGFLSTLQRDASYFLD 161 (232)
T ss_dssp T-----------EEEEEES-----SHHHHHHHHHHHHHTT--CEECCCCGGG--HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C-----------ceeeeCC-----CHHHHHHHHHHHHHhC--CEEEEeCHHH--HhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 1344443 3778999999999986 3555555432 2222 111112233455566666653
Q ss_pred H
Q 011641 239 A 239 (480)
Q Consensus 239 ~ 239 (480)
+
T Consensus 162 ~ 162 (232)
T 3dfu_A 162 E 162 (232)
T ss_dssp H
T ss_pred H
Confidence 3
No 91
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=99.13 E-value=2.3e-10 Score=113.41 Aligned_cols=122 Identities=23% Similarity=0.238 Sum_probs=86.1
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|+||.++|..|+.+..|++|++||+++++++.+...... .... .....++++++|+++ +++||+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~----~~~~---~~~~~~i~~t~d~~~-l~~aDv 72 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYE----SGPV---GLFDTKVTGSNDYAD-TANSDI 72 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHT----THHH---HTCCCEEEEESCGGG-GTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHh----hhhc---ccCCcEEEECCCHHH-HCCCCE
Confidence 79999999999999999999852379999999999888765421000 0000 001245788889876 999999
Q ss_pred EEEeccCCCCCCCCCCCCCCCh-----HHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHH
Q 011641 82 VFVSVNTPTKTQGLGAGKAADL-----TYWESAARVIADVSKSDKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
||+|+|+|...++ .+.|+ +.++++.+.+.++.+ +.+|++ -|+|+++...+
T Consensus 73 Viiav~~p~~~g~----~r~dl~~~n~~i~~~i~~~i~~~~~-~~~viv-~tNP~~~~~~~ 127 (310)
T 1guz_A 73 VIITAGLPRKPGM----TREDLLMKNAGIVKEVTDNIMKHSK-NPIIIV-VSNPLDIMTHV 127 (310)
T ss_dssp EEECCSCCCCTTC----CHHHHHHHHHHHHHHHHHHHHHHCS-SCEEEE-CCSSHHHHHHH
T ss_pred EEEeCCCCCCCCC----CHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEE-EcCchHHHHHH
Confidence 9999999865421 13454 666788888888864 554444 37898886443
No 92
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.73 E-value=5.1e-12 Score=117.47 Aligned_cols=166 Identities=15% Similarity=0.153 Sum_probs=100.6
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||+|||+|.||..+|..|++. |++|++||++++ .+.+... +++.+ +..++++.+|+
T Consensus 20 ~~I~iIG~G~mG~~la~~L~~~--G~~V~~~~r~~~-~~~~~~~-------------------g~~~~-~~~~~~~~aDv 76 (201)
T 2yjz_A 20 GVVCIFGTGDFGKSLGLKMLQC--GYSVVFGSRNPQ-VSSLLPR-------------------GAEVL-CYSEAASRSDV 76 (201)
Confidence 7899999999999999999988 899999999876 4333210 12333 55667889999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCc------chHHHHHHHHHhcCCCCceEEeeC
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPV------KTAEAIEKILTHNSKGIKFQILSN 155 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~------gt~~~l~~~l~~~~~g~~~~v~~~ 155 (480)
||+|||... ++.++ ++.+ +.++++||+.++..+ +..+.+.+.+..... .. .+...
T Consensus 77 Vilav~~~~---------------~~~v~-~l~~-~~~~~ivI~~~~G~~~~~~~~~~~~~l~~~~~~~~v-vr-a~~n~ 137 (201)
T 2yjz_A 77 IVLAVHREH---------------YDFLA-ELAD-SLKGRVLIDVSNNQKMNQYPESNAEYLAQLVPGAHV-VK-AFNTI 137 (201)
Confidence 999998531 12233 3433 345778887766543 223334333322110 00 00111
Q ss_pred Cc-cccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhh
Q 011641 156 PE-FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLA 218 (480)
Q Consensus 156 Pe-~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~ 218 (480)
|. ...+|.. . .....++.|++ ++..+.++++|+.++. ..+..++++.+.+.|.+
T Consensus 138 ~a~~~~~g~l-~--g~~~~~~~g~~-----~~~~~~v~~ll~~~G~-~~~~~G~l~~a~~~e~~ 192 (201)
T 2yjz_A 138 SAWALQSGTL-D--ASRQVFVCGND-----SKAKDRVMDIARTLGL-TPLDQGSLVAAKEIENY 192 (201)
Confidence 11 1222321 1 01113455543 6788899999999873 45667788888888754
No 93
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=99.11 E-value=1.8e-10 Score=116.02 Aligned_cols=109 Identities=15% Similarity=0.090 Sum_probs=81.7
Q ss_pred cEEEEECCChhHHHHHHHHH-HcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGAGYVGGPTMAVIA-LKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La-~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
++|+|||+|.||..+|..+. .. |++|++||++++..+...+. ++..++++++.++.||
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~--G~~V~~~d~~~~~~~~~~~~-------------------g~~~~~~l~ell~~aD 222 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGL--GMKLVYYDVAPADAETEKAL-------------------GAERVDSLEELARRSD 222 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSSCCCHHHHHHH-------------------TCEECSSHHHHHHHCS
T ss_pred CEEEEEEECHHHHHHHHHHHHhc--CCEEEEECCCCcchhhHhhc-------------------CcEEeCCHHHHhccCC
Confidence 68999999999999999998 76 99999999987654433210 2344567888889999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
+|++|+|..... ..+. .+.+.+.+++++++|+.|+.++...+.+.+.|++.
T Consensus 223 vVil~vp~~~~t-----------~~li--~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~ 273 (348)
T 2w2k_A 223 CVSVSVPYMKLT-----------HHLI--DEAFFAAMKPGSRIVNTARGPVISQDALIAALKSG 273 (348)
T ss_dssp EEEECCCCSGGG-----------TTCB--CHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred EEEEeCCCChHH-----------HHHh--hHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhC
Confidence 999999864321 1111 12445678899999999998888888888888763
No 94
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=99.07 E-value=1.3e-09 Score=108.89 Aligned_cols=124 Identities=18% Similarity=0.206 Sum_probs=86.8
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCC-eEEEEECCHHHHHHHHcCCCCCcCCChHHHHhh-hcCCCEEEecCHHHhhccC
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFSTDVEKHVSEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~a 79 (480)
|||+|||+|+||.++|..|+.+ |+ +|++||+++++++..... +...... ....++++++|+++++++|
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~--g~~~V~L~D~~~~~~~~~~~~--------l~~~~~~~~~~~~i~~t~d~~ea~~~a 79 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR--ELADVVLYDVVKGMPEGKALD--------LSHVTSVVDTNVSVRAEYSYEAALTGA 79 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSSSHHHHHHHH--------HHHHHHHTTCCCCEEEECSHHHHHTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCeEEEEECChhHHHHHHHH--------HHhhhhccCCCCEEEEeCCHHHHhCCC
Confidence 7999999999999999999998 88 999999999887763211 1111111 1235688899998789999
Q ss_pred cEEEEeccCCCCCCCC-CCCCCCC-----hHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHH
Q 011641 80 DIVFVSVNTPTKTQGL-GAGKAAD-----LTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 80 DvVii~Vptp~~~~~~-~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
|+||+++++|.....- .+....| ...++++++.|.++. ++.++++ .|+|.++...+
T Consensus 80 DiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~-~tNP~~~~t~~ 141 (331)
T 1pzg_A 80 DCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIV-VTNPLDCMVKV 141 (331)
T ss_dssp SEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEE-CCSSHHHHHHH
T ss_pred CEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEE-EcCchHHHHHH
Confidence 9999999777543100 0001334 244678888888887 5666554 68888876443
No 95
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=99.03 E-value=4.7e-10 Score=109.75 Aligned_cols=105 Identities=15% Similarity=0.178 Sum_probs=81.3
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||.++|..+... |++|++||++++..+ .....++++++++.||+
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~~~------------------------~~~~~~~l~ell~~aDi 176 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAF--GMRVIAYTRSSVDQN------------------------VDVISESPADLFRQSDF 176 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSCCCTT------------------------CSEECSSHHHHHHHCSE
T ss_pred chheeeccCchhHHHHHHHHhh--CcEEEEEeccccccc------------------------cccccCChHHHhhccCe
Confidence 6899999999999999999988 999999999754211 12445688888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcC
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNS 145 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~ 145 (480)
|++|+|......+ .. -+...+.++++.++|+.|+.++-..+.+.+.|++..
T Consensus 177 V~l~~P~t~~t~~-----li--------~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~ 227 (290)
T 3gvx_A 177 VLIAIPLTDKTRG-----MV--------NSRLLANARKNLTIVNVARADVVSKPDMIGFLKERS 227 (290)
T ss_dssp EEECCCCCTTTTT-----CB--------SHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCT
T ss_pred EEEEeeccccchh-----hh--------hHHHHhhhhcCceEEEeehhcccCCcchhhhhhhcc
Confidence 9999984322110 11 145667889999999999988888888888887643
No 96
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=99.02 E-value=2.4e-09 Score=106.61 Aligned_cols=122 Identities=19% Similarity=0.211 Sum_probs=84.5
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCC-eEEEEECCHHHHHHHHcCCCCCcCCChHHHHhh-hcCCCEEEecCHHHhhccC
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFSTDVEKHVSEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~a 79 (480)
|||+|||+|+||.++|..|+.+ |+ +|+++|+++++++..... +...... ....+++.++|+ +++++|
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~--g~~~v~L~Di~~~~l~~~~~~--------l~~~~~~~~~~~~i~~t~d~-~al~~a 73 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK--NLGDVVLFDIVKNMPHGKALD--------TSHTNVMAYSNCKVSGSNTY-DDLAGA 73 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSSSHHHHHHHH--------HHTHHHHHTCCCCEEEECCG-GGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCeEEEEeCCHHHHHHHHHH--------HHhhhhhcCCCcEEEECCCH-HHhCCC
Confidence 7999999999999999999998 77 899999999887754321 1111111 123568888998 679999
Q ss_pred cEEEEeccCCCCCCCCC-CCCCCCh-----HHHHHHHHHHHhhCCCCcEEEEecCCCcchHHH
Q 011641 80 DIVFVSVNTPTKTQGLG-AGKAADL-----TYWESAARVIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~-~~~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
|+||+++++|...+..+ +....|+ ..++++++.|.++. ++.++++ -|.|.++...
T Consensus 74 D~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv-~tNP~~~~t~ 134 (322)
T 1t2d_A 74 DVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIV-VTNPVDVMVQ 134 (322)
T ss_dssp SEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEE-CSSSHHHHHH
T ss_pred CEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEE-ecCChHHHHH
Confidence 99999998776431100 0002333 45677888888887 5666655 3778877543
No 97
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=99.00 E-value=1.3e-09 Score=108.85 Aligned_cols=104 Identities=15% Similarity=0.176 Sum_probs=78.6
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|+|+|||+|.||..+|..+... |++|++||++++..+ .....+++++++++||+
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~--G~~V~~~dr~~~~~~------------------------g~~~~~~l~ell~~aDv 218 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAF--DCPISYFSRSKKPNT------------------------NYTYYGSVVELASNSDI 218 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT--TCCEEEECSSCCTTC------------------------CSEEESCHHHHHHTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEECCCchhcc------------------------CceecCCHHHHHhcCCE
Confidence 6899999999999999999987 999999999764310 12345678888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++++|......+ ..+ +++.+.+++++++|+.|+..+-.++.+.+.|++.
T Consensus 219 Vil~vP~~~~t~~-----li~--------~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g 268 (333)
T 3ba1_A 219 LVVACPLTPETTH-----IIN--------REVIDALGPKGVLINIGRGPHVDEPELVSALVEG 268 (333)
T ss_dssp EEECSCCCGGGTT-----CBC--------HHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEecCCChHHHH-----Hhh--------HHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcC
Confidence 9999986321100 111 2344567889999999988888888888888764
No 98
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=99.00 E-value=4.5e-09 Score=104.91 Aligned_cols=117 Identities=21% Similarity=0.304 Sum_probs=83.7
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCC-eEEEEECCHHHHHHHHcCCCCCcCCChHHHHhh-hcCCCEEEecCHHHhhccC
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFSTDVEKHVSEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~a 79 (480)
|||+|||+|.||.++|..|+.+ |+ +|++||+++++++..... +...... ....++++++|+ +++++|
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~--g~~~V~L~Di~~~~l~~~~~~--------l~~~~~~~~~~~~i~~t~d~-~al~~a 83 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQK--DLGDVYMFDIIEGVPQGKALD--------LNHCMALIGSPAKIFGENNY-EYLQNS 83 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSTTHHHHHHHH--------HHHHHHHHTCCCCEEEESCG-GGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCeEEEEECCHHHHHHHHHH--------HHhHhhccCCCCEEEECCCH-HHHCCC
Confidence 6899999999999999999998 88 999999999888753211 1111111 123568888998 679999
Q ss_pred cEEEEeccCCCCCCCCCCCCCCCh-----HHHHHHHHHHHhhCCCCcEEEEecCCCcchHH
Q 011641 80 DIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARVIADVSKSDKIVVEKSTVPVKTAE 135 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~ 135 (480)
|+||+++++|..... ...|+ ..++++++++.++. ++.++++- |.|.++..
T Consensus 84 D~VI~avg~p~k~g~----tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~-tNP~~~~t 138 (328)
T 2hjr_A 84 DVVIITAGVPRKPNM----TRSDLLTVNAKIVGSVAENVGKYC-PNAFVICI-TNPLDAMV 138 (328)
T ss_dssp SEEEECCSCCCCTTC----CSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEEC-CSSHHHHH
T ss_pred CEEEEcCCCCCCCCC----chhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEe-cCchHHHH
Confidence 999999987764311 12344 44677888888887 56666553 66776643
No 99
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.98 E-value=3.6e-09 Score=104.75 Aligned_cols=118 Identities=17% Similarity=0.186 Sum_probs=80.4
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCC--CeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEE-ecCHHHhhc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPS--IEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFF-STDVEKHVS 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G--~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~-t~d~~~a~~ 77 (480)
||||+|||+|.||.++|..|+.+ | ++|++||+++++++.+.... ..... ......++ ++|+ ++++
T Consensus 1 m~kI~VIGaG~~G~~la~~L~~~--g~~~~V~l~d~~~~~~~~~~~~l--------~~~~~-~~~~~~~~~~~d~-~~~~ 68 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAAVAHGLIAQ--GVADDYVFIDANEAKVKADQIDF--------QDAMA-NLEAHGNIVINDW-AALA 68 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHHH--------HHHGG-GSSSCCEEEESCG-GGGT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEcCCHHHHHHHHHHH--------Hhhhh-hcCCCeEEEeCCH-HHhC
Confidence 79999999999999999999998 7 89999999999887765310 00000 00112343 5777 6689
Q ss_pred cCcEEEEeccCCCC----CCCCCCCCCC-----ChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHH
Q 011641 78 EADIVFVSVNTPTK----TQGLGAGKAA-----DLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 78 ~aDvVii~Vptp~~----~~~~~~~~~~-----d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
+||+||+|+|+|.. ... .+. +...+.++++.+.++.+ +.+|++ .|.|.++...
T Consensus 69 ~aDvViiav~~~~~~~~~~g~----~r~~l~~~n~~i~~~i~~~i~~~~~-~~~ii~-~tNp~~~~~~ 130 (309)
T 1hyh_A 69 DADVVISTLGNIKLQQDNPTG----DRFAELKFTSSMVQSVGTNLKESGF-HGVLVV-ISNPVDVITA 130 (309)
T ss_dssp TCSEEEECCSCGGGTC-----------CTTHHHHHHHHHHHHHHHHHTTC-CSEEEE-CSSSHHHHHH
T ss_pred CCCEEEEecCCcccCCCCCCC----CHHHHHHHHHHHHHHHHHHHHHHCC-CcEEEE-EcCcHHHHHH
Confidence 99999999997642 100 011 23345777888887764 666655 6788877443
No 100
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=98.98 E-value=4.3e-09 Score=105.76 Aligned_cols=109 Identities=13% Similarity=0.113 Sum_probs=81.8
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.||..+|..+... |++|++||+++........ +++..++++++++.||+
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~~~~~~~--------------------g~~~~~~l~ell~~aDi 218 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAF--GMNVLVWGRENSKERARAD--------------------GFAVAESKDALFEQSDV 218 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSHHHHHHHHHT--------------------TCEECSSHHHHHHHCSE
T ss_pred CEEEEEeECHHHHHHHHHHHhC--CCEEEEECCCCCHHHHHhc--------------------CceEeCCHHHHHhhCCE
Confidence 5899999999999999999987 9999999998643222221 24556688898999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcC
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNS 145 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~ 145 (480)
|++++|......+ .. -+...+.++++.++|+.|+.++-..+.+.+.|++..
T Consensus 219 V~l~~Plt~~t~~-----li--------~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~ 269 (352)
T 3gg9_A 219 LSVHLRLNDETRS-----II--------TVADLTRMKPTALFVNTSRAELVEENGMVTALNRGR 269 (352)
T ss_dssp EEECCCCSTTTTT-----CB--------CHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTS
T ss_pred EEEeccCcHHHHH-----hh--------CHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCC
Confidence 9999984322111 11 134567889999999999887777777888887643
No 101
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=98.97 E-value=2.6e-09 Score=106.80 Aligned_cols=132 Identities=11% Similarity=0.142 Sum_probs=89.7
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..++.. |++|++||++++. +...+ .++..+ ++++++++||+
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~~~--G~~V~~~d~~~~~-~~~~~-------------------~g~~~~-~l~e~l~~aDi 203 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLIPF--GVKLYYWSRHRKV-NVEKE-------------------LKARYM-DIDELLEKSDI 203 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG--TCEEEEECSSCCH-HHHHH-------------------HTEEEC-CHHHHHHHCSE
T ss_pred CEEEEEccCHHHHHHHHHHHHC--CCEEEEECCCcch-hhhhh-------------------cCceec-CHHHHHhhCCE
Confidence 6899999999999999999987 9999999998775 32211 023443 77888899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCC---CCceEEeeCCcc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSK---GIKFQILSNPEF 158 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~---g~~~~v~~~Pe~ 158 (480)
|++|+|..... ..+. -+.+.+.++++ ++++.|+..+-..+.+.+.+++... +.|+ +.||.
T Consensus 204 Vil~vp~~~~t-----------~~~i--~~~~~~~mk~g-ilin~srg~~vd~~aL~~aL~~~~i~gaglDv---~~~EP 266 (333)
T 2d0i_A 204 VILALPLTRDT-----------YHII--NEERVKKLEGK-YLVNIGRGALVDEKAVTEAIKQGKLKGYATDV---FEKEP 266 (333)
T ss_dssp EEECCCCCTTT-----------TTSB--CHHHHHHTBTC-EEEECSCGGGBCHHHHHHHHHTTCBCEEEESC---CSSSS
T ss_pred EEEcCCCChHH-----------HHHh--CHHHHhhCCCC-EEEECCCCcccCHHHHHHHHHcCCceEEEecC---CCCCC
Confidence 99999865221 1111 12344567888 9999998887777778777776321 2332 46554
Q ss_pred ccccccccccCCCC-eEEEe
Q 011641 159 LAEGTAIQDLFNPD-RVLIG 177 (480)
Q Consensus 159 ~~~G~a~~~~~~~~-~vviG 177 (480)
.. . +.++..+ .+++.
T Consensus 267 ~~-~---~~L~~~~~nvilt 282 (333)
T 2d0i_A 267 VR-E---HELFKYEWETVLT 282 (333)
T ss_dssp CS-C---CGGGGCTTTEEEC
T ss_pred CC-C---chHHcCCCCEEEc
Confidence 32 2 3455555 66654
No 102
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=98.96 E-value=4.7e-09 Score=103.89 Aligned_cols=120 Identities=20% Similarity=0.279 Sum_probs=80.7
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCC-eEEEEECCHHHHHHHHcCCCCCcCCChHHHHh-hhcCCCEEEecCHHHhhcc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVK-QCRGKNLFFSTDVEKHVSE 78 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~-~~~~~~l~~t~d~~~a~~~ 78 (480)
+|||+|||+|+||.++|..|+.+ |+ +|.++|+++++++..... +.+... .....++++++|+ +++++
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~--g~~~v~L~Di~~~~~~g~~~d--------l~~~~~~~~~~~~i~~t~d~-~a~~~ 70 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAK--ELGDIVLLDIVEGVPQGKALD--------LYEASPIEGFDVRVTGTNNY-ADTAN 70 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSSSSHHHHHHHH--------HHTTHHHHTCCCCEEEESCG-GGGTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCCeEEEEeCCccHHHHHHHh--------HHHhHhhcCCCeEEEECCCH-HHHCC
Confidence 37999999999999999999988 76 899999999877643321 111100 0113467888898 66999
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCCh-----HHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHH
Q 011641 79 ADIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARVIADVSKSDKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
||+||+++++|..... .+.|+ ..++++++.+.++. ++.+|++ .|+|.++...+
T Consensus 71 aD~Vi~a~g~p~~~g~----~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~-~tNPv~~~t~~ 128 (309)
T 1ur5_A 71 SDVIVVTSGAPRKPGM----SREDLIKVNADITRACISQAAPLS-PNAVIIM-VNNPLDAMTYL 128 (309)
T ss_dssp CSEEEECCCC------------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEE-CCSSHHHHHHH
T ss_pred CCEEEEcCCCCCCCCC----CHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEE-cCCchHHHHHH
Confidence 9999999998865411 12333 44556677777775 5666655 58898876443
No 103
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=98.94 E-value=4.9e-09 Score=104.26 Aligned_cols=108 Identities=12% Similarity=0.114 Sum_probs=78.9
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEEC-CHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDI-SVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~-~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
++|+|||+|.||..+|..+... |++|++||+ +++....... +....++++++++.||
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~~~~~~~--------------------g~~~~~~l~ell~~aD 204 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGF--DMDIDYFDTHRASSSDEASY--------------------QATFHDSLDSLLSVSQ 204 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSCCCHHHHHHH--------------------TCEECSSHHHHHHHCS
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCEEEEECCCCcChhhhhhc--------------------CcEEcCCHHHHHhhCC
Confidence 6899999999999999999977 999999999 7765322111 1344557888889999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
+|++|+|......+ ..+ +...+.++++.++|+.|+..+-..+.+.+.+++.
T Consensus 205 vVil~~p~~~~t~~-----~i~--------~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g 255 (320)
T 1gdh_A 205 FFSLNAPSTPETRY-----FFN--------KATIKSLPQGAIVVNTARGDLVDNELVVAALEAG 255 (320)
T ss_dssp EEEECCCCCTTTTT-----CBS--------HHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEEeccCchHHHh-----hcC--------HHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 99999985321100 111 3455778999999998887665667777777764
No 104
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=98.91 E-value=4.2e-09 Score=104.39 Aligned_cols=107 Identities=17% Similarity=0.196 Sum_probs=79.3
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||++++.......| ... .++++.++.||+
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~~~~~~g--------------------~~~-~~l~ell~~aDv 199 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAM--GMKVLAYDILDIREKAEKIN--------------------AKA-VSLEELLKNSDV 199 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT--TCEEEEECSSCCHHHHHHTT--------------------CEE-CCHHHHHHHCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHHC--CCEEEEECCCcchhHHHhcC--------------------cee-cCHHHHHhhCCE
Confidence 6899999999999999999987 99999999987664321111 233 377888899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|......+ ..+ +...+.++++.++|+.|+.++-..+.+.+.+++.
T Consensus 200 Vvl~~P~~~~t~~-----li~--------~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g 249 (313)
T 2ekl_A 200 ISLHVTVSKDAKP-----IID--------YPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKG 249 (313)
T ss_dssp EEECCCCCTTSCC-----SBC--------HHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTT
T ss_pred EEEeccCChHHHH-----hhC--------HHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcC
Confidence 9999985432111 111 3345678899999999987776677788888764
No 105
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=98.91 E-value=1.1e-08 Score=101.01 Aligned_cols=107 Identities=21% Similarity=0.232 Sum_probs=78.4
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||++++. +...+. +++. .++++.++.||+
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~-~~~~~~-------------------g~~~-~~l~ell~~aDv 199 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANAL--GMNILLYDPYPNE-ERAKEV-------------------NGKF-VDLETLLKESDV 199 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCH-HHHHHT-------------------TCEE-CCHHHHHHHCSE
T ss_pred ceEEEEccCHHHHHHHHHHHHC--CCEEEEECCCCCh-hhHhhc-------------------Cccc-cCHHHHHhhCCE
Confidence 5899999999999999999987 9999999998765 222211 1233 367788899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|......+ ..+ +...+.++++.++|+.|+.++-..+.+.+.|++.
T Consensus 200 V~l~~p~~~~t~~-----li~--------~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g 249 (307)
T 1wwk_A 200 VTIHVPLVESTYH-----LIN--------EERLKLMKKTAILINTSRGPVVDTNALVKALKEG 249 (307)
T ss_dssp EEECCCCSTTTTT-----CBC--------HHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEecCCChHHhh-----hcC--------HHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhC
Confidence 9999985322100 111 2345678899999999887666667787778764
No 106
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=98.90 E-value=3.4e-09 Score=106.49 Aligned_cols=109 Identities=14% Similarity=0.202 Sum_probs=81.7
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|+|+|||+|.||..+|..+... |++|++||+++...+...+. ++...+++++.++.||+
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~~~~~-------------------g~~~~~~l~ell~~aDv 223 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPF--GCNLLYHDRLQMAPELEKET-------------------GAKFVEDLNEMLPKCDV 223 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG--CCEEEEECSSCCCHHHHHHH-------------------CCEECSCHHHHGGGCSE
T ss_pred CEEeEEEeCHHHHHHHHHHHHC--CCEEEEeCCCccCHHHHHhC-------------------CCeEcCCHHHHHhcCCE
Confidence 6899999999999999999987 99999999975433332220 23455688899999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|......+ ..+ +...+.++++.++|+.|..++-..+.+.+.|++.
T Consensus 224 V~l~~Plt~~t~~-----li~--------~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 273 (351)
T 3jtm_A 224 IVINMPLTEKTRG-----MFN--------KELIGKLKKGVLIVNNARGAIMERQAVVDAVESG 273 (351)
T ss_dssp EEECSCCCTTTTT-----CBS--------HHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEECCCCCHHHHH-----hhc--------HHHHhcCCCCCEEEECcCchhhCHHHHHHHHHhC
Confidence 9999984322111 111 3455678999999999988777778888888764
No 107
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=98.89 E-value=1.3e-08 Score=101.95 Aligned_cols=107 Identities=9% Similarity=0.113 Sum_probs=79.9
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.||..+|..+... |++|++||+++...+... ..+...++++.++.||+
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~~~---------------------g~~~~~~l~ell~~sDv 230 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGF--GLAIHYHNRTRLSHALEE---------------------GAIYHDTLDSLLGASDI 230 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTT--TCEEEEECSSCCCHHHHT---------------------TCEECSSHHHHHHTCSE
T ss_pred CEEEEEEeChhHHHHHHHHHHC--CCEEEEECCCCcchhhhc---------------------CCeEeCCHHHHHhhCCE
Confidence 5899999999999999999976 999999999753322211 13455688898999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++++|......+ .. -+...+.++++.++|+.|..+.-..+.+.+.|++.
T Consensus 231 V~l~~Plt~~T~~-----li--------~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 280 (345)
T 4g2n_A 231 FLIAAPGRPELKG-----FL--------DHDRIAKIPEGAVVINISRGDLINDDALIEALRSK 280 (345)
T ss_dssp EEECSCCCGGGTT-----CB--------CHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEecCCCHHHHH-----Hh--------CHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhC
Confidence 9999985322111 11 13455678999999999988777777788888764
No 108
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=98.88 E-value=2.7e-09 Score=106.03 Aligned_cols=107 Identities=13% Similarity=0.186 Sum_probs=79.3
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.||..+|..+... |++|++||++++..+.+ .......++++.+++||+
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~~---------------------~~~~~~~~l~ell~~aDv 194 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASAL--GMHVIGVNTTGHPADHF---------------------HETVAFTATADALATANF 194 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSCCCCTTC---------------------SEEEEGGGCHHHHHHCSE
T ss_pred CeEEEECcCHHHHHHHHHHHhC--CCEEEEECCCcchhHhH---------------------hhccccCCHHHHHhhCCE
Confidence 5899999999999999999987 99999999975432111 011223567788999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|......+ .. -+.....++++.++|+.|+.++-..+.+.+.|++.
T Consensus 195 V~l~lPlt~~t~~-----li--------~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g 244 (324)
T 3evt_A 195 IVNALPLTPTTHH-----LF--------STELFQQTKQQPMLINIGRGPAVDTTALMTALDHH 244 (324)
T ss_dssp EEECCCCCGGGTT-----CB--------SHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTT
T ss_pred EEEcCCCchHHHH-----hc--------CHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhC
Confidence 9999984322111 11 13456778999999999998888888888888764
No 109
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.88 E-value=1.9e-08 Score=100.06 Aligned_cols=117 Identities=26% Similarity=0.359 Sum_probs=79.3
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCC--eEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccC
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
|||+|||+|.||.++|..|+.+ |+ +|+++|+++++++.+... +..........++.. ++. +++++|
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~--g~~~~V~l~D~~~~~~~~~~~~--------l~~~~~~~~~~~i~~-~d~-~~~~~a 68 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMK--GFAREMVLIDVDKKRAEGDALD--------LIHGTPFTRRANIYA-GDY-ADLKGS 68 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHH--------HHHHGGGSCCCEEEE-CCG-GGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEeCChHHHHHHHHH--------HHhhhhhcCCcEEEe-CCH-HHhCCC
Confidence 7999999999999999999998 88 999999999888775421 000000000123454 464 468999
Q ss_pred cEEEEeccCCCCCCCCCCCCCCCh-----HHHHHHHHHHHhhCCCCcEEEEecCCCcchHHH
Q 011641 80 DIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARVIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
|+||+|+|++.... ....|+ ..++++++.|.++. ++.++++ .|.|.++...
T Consensus 69 DvViiav~~~~~~g----~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~ii~-~tNp~~~~~~ 124 (319)
T 1a5z_A 69 DVVIVAAGVPQKPG----ETRLQLLGRNARVMKEIARNVSKYA-PDSIVIV-VTNPVDVLTY 124 (319)
T ss_dssp SEEEECCCCCCCSS----CCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEE-CSSSHHHHHH
T ss_pred CEEEEccCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEE-eCCcHHHHHH
Confidence 99999999876431 012232 33577888888875 4665554 5778877543
No 110
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=98.87 E-value=1.6e-08 Score=100.26 Aligned_cols=117 Identities=23% Similarity=0.302 Sum_probs=80.5
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCC--eEEEEECCHHHHH--HH--HcCCCCCcCCChHHHHhhhcCCCEEEecCHHH
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVSRIN--AW--NSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEK 74 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~--~l--~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~ 74 (480)
+|||+|||+|.||.++|..|+.+ |+ +|+++|+++++++ .+ ..+ .++.. ..+++.+++.+
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~--g~~~~V~l~d~~~~~~~~~~~~~~~~-~~~~~-----------~~~v~~~~~~~- 71 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQR--GIAREIVLEDIAKERVEAEVLDMQHG-SSFYP-----------TVSIDGSDDPE- 71 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSSHHHHHHHHHHHHHT-GGGST-----------TCEEEEESCGG-
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCChhHHHHHHHHHHhh-hhhcC-----------CeEEEeCCCHH-
Confidence 48999999999999999999998 88 9999999998776 23 222 11110 12456666754
Q ss_pred hhccCcEEEEeccCCCCCCCCCCCCCC-----ChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHH
Q 011641 75 HVSEADIVFVSVNTPTKTQGLGAGKAA-----DLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIE 138 (480)
Q Consensus 75 a~~~aDvVii~Vptp~~~~~~~~~~~~-----d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~ 138 (480)
++++||+||+|+++|..... ... +...+.++++.+.++ .++++|+. .|.|.++...+.
T Consensus 72 ~~~~aD~Vii~v~~~~~~g~----~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~-~~Np~~~~~~~~ 134 (319)
T 1lld_A 72 ICRDADMVVITAGPRQKPGQ----SRLELVGATVNILKAIMPNLVKV-APNAIYML-ITNPVDIATHVA 134 (319)
T ss_dssp GGTTCSEEEECCCCCCCTTC----CHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEE-CCSSHHHHHHHH
T ss_pred HhCCCCEEEECCCCCCCCCC----CHHHHHHHHHHHHHHHHHHHHHh-CCCceEEE-ecCchHHHHHHH
Confidence 58999999999987753210 011 224455778888876 56776654 577877765543
No 111
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=98.86 E-value=9.1e-09 Score=102.81 Aligned_cols=104 Identities=15% Similarity=0.158 Sum_probs=65.9
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.||..+|..+... |++|++||++++. . .......+++++++.||+
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~------~------------------~~~~~~~sl~ell~~aDv 225 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAF--GMSVRYWNRSTLS------G------------------VDWIAHQSPVDLARDSDV 225 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSCCT------T------------------SCCEECSSHHHHHHTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCccc------c------------------cCceecCCHHHHHhcCCE
Confidence 6899999999999999999987 9999999997642 0 013445688898999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|..... ..+ +-+...+.++++.++|+.|+.++-..+.+.+.|++.
T Consensus 226 Vil~vP~t~~t-----------~~l--i~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g 275 (340)
T 4dgs_A 226 LAVCVAASAAT-----------QNI--VDASLLQALGPEGIVVNVARGNVVDEDALIEALKSG 275 (340)
T ss_dssp EEECC-----------------------CHHHHHHTTTTCEEEECSCC--------------C
T ss_pred EEEeCCCCHHH-----------HHH--hhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcC
Confidence 99999842211 111 124566778999999998887766666777777653
No 112
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=98.85 E-value=2e-08 Score=106.60 Aligned_cols=106 Identities=18% Similarity=0.180 Sum_probs=78.9
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||.++|..|... |++|++||+++........| +..+ +++++++.||+
T Consensus 143 ~~vgIIG~G~IG~~vA~~l~~~--G~~V~~~d~~~~~~~a~~~g--------------------~~~~-~l~e~~~~aDv 199 (529)
T 1ygy_A 143 KTVGVVGLGRIGQLVAQRIAAF--GAYVVAYDPYVSPARAAQLG--------------------IELL-SLDDLLARADF 199 (529)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCEEEEECTTSCHHHHHHHT--------------------CEEC-CHHHHHHHCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHhC--CCEEEEECCCCChhHHHhcC--------------------cEEc-CHHHHHhcCCE
Confidence 6899999999999999999987 99999999976432211111 2333 67888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHH-HHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAA-RVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~-~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|..... ..++ +.+.+.+++++++++.|+..+-..+.+.+.+++.
T Consensus 200 V~l~~P~~~~t--------------~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g 249 (529)
T 1ygy_A 200 ISVHLPKTPET--------------AGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGG 249 (529)
T ss_dssp EEECCCCSTTT--------------TTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTS
T ss_pred EEECCCCchHH--------------HHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcC
Confidence 99999854211 1112 2356778999999999988887777788878763
No 113
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=98.84 E-value=7.7e-09 Score=102.73 Aligned_cols=115 Identities=17% Similarity=0.314 Sum_probs=74.2
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCC--eEEEEECCHHHHHH----HHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHh
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVSRINA----WNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKH 75 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~----l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a 75 (480)
|||+|||+|++|.++|..|+.+ |+ +|.++|+++++++. +.... ++. ...+++.+..++
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~--~~~~ev~L~Di~~~~~~g~~~dl~~~~-~~~-------------~~~~i~~~~~~a 71 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALR--QTANELVLIDVFKEKAIGEAMDINHGL-PFM-------------GQMSLYAGDYSD 71 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCSSEEEEECCC---CCHHHHHHTTSC-CCT-------------TCEEEC--CGGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCChHHHHHHHHHHHHhH-Hhc-------------CCeEEEECCHHH
Confidence 6899999999999999999987 66 99999999876543 22211 110 123333223456
Q ss_pred hccCcEEEEeccCCCCCCCCCCCC----CCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHH
Q 011641 76 VSEADIVFVSVNTPTKTQGLGAGK----AADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 76 ~~~aDvVii~Vptp~~~~~~~~~~----~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
+++||+||+++++|..... ++ ..+.+.++++.+.+.++. ++.+|++ .|+|+++...+
T Consensus 72 ~~~aDvVii~~g~p~k~g~---~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv-~tNPv~~~~~~ 132 (318)
T 1y6j_A 72 VKDCDVIVVTAGANRKPGE---TRLDLAKKNVMIAKEVTQNIMKYY-NHGVILV-VSNPVDIITYM 132 (318)
T ss_dssp GTTCSEEEECCCC---------CHHHHHHHHHHHHHHHHHHHHHHC-CSCEEEE-CSSSHHHHHHH
T ss_pred hCCCCEEEEcCCCCCCCCc---CHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEE-ecCcHHHHHHH
Confidence 9999999999999864310 00 123445678888888885 5666666 58999986654
No 114
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=98.84 E-value=3.3e-08 Score=98.70 Aligned_cols=107 Identities=14% Similarity=0.063 Sum_probs=79.2
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||++++.......| ... .++++.++.||+
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~~~~~~~g--------------------~~~-~~l~ell~~aDv 222 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSF--GMKTIGYDPIISPEVSASFG--------------------VQQ-LPLEEIWPLCDF 222 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSSCHHHHHHTT--------------------CEE-CCHHHHGGGCSE
T ss_pred CEEEEEeECHHHHHHHHHHHHC--CCEEEEECCCcchhhhhhcC--------------------cee-CCHHHHHhcCCE
Confidence 5899999999999999999876 99999999986652211111 232 377888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|......+ ..+ +...+.++++.++|+.|+.++-..+.+.+.+++.
T Consensus 223 V~l~~P~t~~t~~-----li~--------~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g 272 (335)
T 2g76_A 223 ITVHTPLLPSTTG-----LLN--------DNTFAQCKKGVRVVNCARGGIVDEGALLRALQSG 272 (335)
T ss_dssp EEECCCCCTTTTT-----SBC--------HHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHT
T ss_pred EEEecCCCHHHHH-----hhC--------HHHHhhCCCCcEEEECCCccccCHHHHHHHHHhC
Confidence 9999986432110 111 3456788999999999987776677788878764
No 115
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=98.83 E-value=3.5e-08 Score=98.97 Aligned_cols=108 Identities=13% Similarity=0.097 Sum_probs=80.2
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||++++....... +.....++++.++.||+
T Consensus 169 ~tvGIIG~G~IG~~vA~~l~~~--G~~V~~~d~~~~~~~~~~~--------------------g~~~~~~l~ell~~aDv 226 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRAKAF--GFNVLFYDPYLSDGVERAL--------------------GLQRVSTLQDLLFHSDC 226 (347)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCEEEEECTTSCTTHHHHH--------------------TCEECSSHHHHHHHCSE
T ss_pred CEEEEEeECHHHHHHHHHHHHC--CCEEEEECCCcchhhHhhc--------------------CCeecCCHHHHHhcCCE
Confidence 6899999999999999999987 9999999987542111000 13445578888899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++++|......+ ..+ +...+.++++.++|+.|+.++-..+.+.+.|++.
T Consensus 227 V~l~~P~t~~t~~-----li~--------~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g 276 (347)
T 1mx3_A 227 VTLHCGLNEHNHH-----LIN--------DFTVKQMRQGAFLVNTARGGLVDEKALAQALKEG 276 (347)
T ss_dssp EEECCCCCTTCTT-----SBS--------HHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHT
T ss_pred EEEcCCCCHHHHH-----HhH--------HHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhC
Confidence 9999985322110 111 3455678999999999999888888888888764
No 116
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=98.81 E-value=2.2e-08 Score=99.36 Aligned_cols=115 Identities=18% Similarity=0.312 Sum_probs=80.1
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCC-eEEEEECCHHHHHHHHcCCCCCcCCChHHHHh-hhcCCCEEEecCHHHhhccC
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVK-QCRGKNLFFSTDVEKHVSEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~-~~~~~~l~~t~d~~~a~~~a 79 (480)
|||+|||+|.||.++|..|+.+ |+ +|++||+++++++..... +..... .....+++.++|+ +++++|
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~--g~~~V~l~D~~~~~~~~~~~~--------l~~~~~~~~~~~~i~~t~d~-~a~~~a 73 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD--NLADVVLFDIAEGIPQGKALD--------ITHSMVMFGSTSKVIGTDDY-ADISGS 73 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSSSHHHHHHHH--------HHHHHHHHTCCCCEEEESCG-GGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCceEEEEeCCchHHHHHHHH--------HHhhhhhcCCCcEEEECCCH-HHhCCC
Confidence 7999999999999999999998 88 999999999887764210 000000 0012467888888 679999
Q ss_pred cEEEEeccCCCCCCCCCCCCCC-----ChHHHHHHHHHHHhhCCCCcEEEEecCCCcch
Q 011641 80 DIVFVSVNTPTKTQGLGAGKAA-----DLTYWESAARVIADVSKSDKIVVEKSTVPVKT 133 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~-----d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
|+||+|++.|..... .+. +...++++++++.++.+ +++++.. |.|.+.
T Consensus 74 DiVi~avg~p~~~g~----~r~d~~~~~~~i~~~i~~~i~~~~~-~~iii~~-sNp~~~ 126 (317)
T 2ewd_A 74 DVVIITASIPGRPKD----DRSELLFGNARILDSVAEGVKKYCP-NAFVICI-TNPLDV 126 (317)
T ss_dssp SEEEECCCCSSCCSS----CGGGGHHHHHHHHHHHHHHHHHHCT-TSEEEEC-CSSHHH
T ss_pred CEEEEeCCCCCCCCC----cHHHHHHhhHHHHHHHHHHHHHHCC-CcEEEEe-CChHHH
Confidence 999999988765411 111 23446778888888865 7776654 345444
No 117
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=98.80 E-value=1.2e-08 Score=103.67 Aligned_cols=109 Identities=14% Similarity=0.152 Sum_probs=79.5
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||+++...+.... .+++...++++.++.||+
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~--G~~V~~~d~~~~~~~~~~~-------------------~G~~~~~~l~ell~~aDv 250 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPF--DVHLHYTDRHRLPESVEKE-------------------LNLTWHATREDMYPVCDV 250 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG--TCEEEEECSSCCCHHHHHH-------------------HTCEECSSHHHHGGGCSE
T ss_pred CEEEEEeECHHHHHHHHHHHhC--CCEEEEEcCCccchhhHhh-------------------cCceecCCHHHHHhcCCE
Confidence 6899999999999999999887 9999999997543322221 023444578888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++++|......+ ..+ +...+.++++.++|+.|+..+-..+.+.+.|++.
T Consensus 251 V~l~~Plt~~t~~-----li~--------~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 300 (393)
T 2nac_A 251 VTLNCPLHPETEH-----MIN--------DETLKLFKRGAYIVNTARGKLCDRDAVARALESG 300 (393)
T ss_dssp EEECSCCCTTTTT-----CBS--------HHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred EEEecCCchHHHH-----Hhh--------HHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcC
Confidence 9999985322100 111 3455778999999999887666667788888764
No 118
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=98.80 E-value=2.2e-08 Score=98.81 Aligned_cols=116 Identities=18% Similarity=0.332 Sum_probs=74.0
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCC--eEEEEECCHHHHHHHHcC---CCCCcCCChHHHHhhhcCCCEEEecCHHHhh
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVSRINAWNSD---QLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV 76 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~~---~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~ 76 (480)
|||+|||+|.||.++|..|+.+ |+ +|+++|+++++++..... ..++. ...+++. ++. +++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~--g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~-----------~~~~i~~-~~~-~a~ 65 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLR--GSCSELVLVDRDEDRAQAEAEDIAHAAPVS-----------HGTRVWH-GGH-SEL 65 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSSHHHHHHHHHHHTTSCCTT-----------SCCEEEE-ECG-GGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCCHHHHHHHHHhhhhhhhhc-----------CCeEEEE-CCH-HHh
Confidence 7999999999999999999998 88 999999999876643321 11110 0123443 455 569
Q ss_pred ccCcEEEEeccCCCCCCCC-CCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchH
Q 011641 77 SEADIVFVSVNTPTKTQGL-GAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTA 134 (480)
Q Consensus 77 ~~aDvVii~Vptp~~~~~~-~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~ 134 (480)
++||+||+|++.|...... ++.-..++..++++++.+.++. ++.+|++ .|.|.++.
T Consensus 66 ~~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~~~vi~-~tNP~~~~ 122 (304)
T 2v6b_A 66 ADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAA-PDAVLLV-TSNPVDLL 122 (304)
T ss_dssp TTCSEEEECC------------CHHHHHHHHHHHHHHHHHHC-SSSEEEE-CSSSHHHH
T ss_pred CCCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhC-CCeEEEE-ecCchHHH
Confidence 9999999999877532100 0000124455678888888884 6776665 57777653
No 119
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=98.80 E-value=6.9e-08 Score=96.36 Aligned_cols=106 Identities=12% Similarity=0.188 Sum_probs=79.7
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.||..+|..+... |++|++||++++.... .. ..+.. +++++++.||+
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~--G~~V~~~d~~~~~~~~-~~--------------------g~~~~-~l~ell~~aDv 197 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAF--GMKVLCYDVVKREDLK-EK--------------------GCVYT-SLDELLKESDV 197 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCHHHH-HT--------------------TCEEC-CHHHHHHHCSE
T ss_pred ceEEEECcCHHHHHHHHHHHHC--cCEEEEECCCcchhhH-hc--------------------Cceec-CHHHHHhhCCE
Confidence 6899999999999999999987 9999999998765422 11 12333 48888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++++|......+ .. -+...+.++++.++|+.|+..+-..+.+.+.|++.
T Consensus 198 V~l~~P~t~~t~~-----li--------~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g 247 (334)
T 2pi1_A 198 ISLHVPYTKETHH-----MI--------NEERISLMKDGVYLINTARGKVVDTDALYRAYQRG 247 (334)
T ss_dssp EEECCCCCTTTTT-----CB--------CHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred EEEeCCCChHHHH-----hh--------CHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 9999985322211 11 13455778999999999988877778888888764
No 120
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=98.79 E-value=3.4e-09 Score=105.24 Aligned_cols=107 Identities=12% Similarity=0.116 Sum_probs=78.3
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.||..+|..+... |++|++||++++..+. . .......++++.++.||+
T Consensus 141 ~tvGIIGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~------------~---------~~~~~~~~l~ell~~aDv 197 (324)
T 3hg7_A 141 RTLLILGTGSIGQHIAHTGKHF--GMKVLGVSRSGRERAG------------F---------DQVYQLPALNKMLAQADV 197 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCCCTT------------C---------SEEECGGGHHHHHHTCSE
T ss_pred ceEEEEEECHHHHHHHHHHHhC--CCEEEEEcCChHHhhh------------h---------hcccccCCHHHHHhhCCE
Confidence 6899999999999999999987 9999999997531110 0 011223578888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++++|......+ ..+ +.....++++.++|+.|+.++-..+.+.+.|++.
T Consensus 198 V~l~lPlt~~T~~-----li~--------~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 247 (324)
T 3hg7_A 198 IVSVLPATRETHH-----LFT--------ASRFEHCKPGAILFNVGRGNAINEGDLLTALRTG 247 (324)
T ss_dssp EEECCCCCSSSTT-----SBC--------TTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTT
T ss_pred EEEeCCCCHHHHH-----HhH--------HHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcC
Confidence 9999984322111 111 2345678899999999988877778888888764
No 121
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.79 E-value=7.7e-08 Score=94.28 Aligned_cols=118 Identities=19% Similarity=0.199 Sum_probs=79.0
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCC--eEEEEECCHHHHHHHHcCCCCCcCCChHHHHhh-hcCCCEEEecCHHHhhcc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFSTDVEKHVSE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~ 78 (480)
|||+|||+|.||.++|..|+.+ |+ +|.+||+++++++..... +...... ....++++++| .+++++
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~--~~~~~v~L~D~~~~~~~g~~~d--------l~~~~~~~~~~~~i~~t~d-~~a~~~ 69 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLN--LDVDEIALVDIAEDLAVGEAMD--------LAHAAAGIDKYPKIVGGAD-YSLLKG 69 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--SCCSEEEEECSSHHHHHHHHHH--------HHHHHHTTTCCCEEEEESC-GGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEECChHHHHHHHHH--------HHhhhhhcCCCCEEEEeCC-HHHhCC
Confidence 8999999999999999999988 77 999999999887632210 0000000 01235777788 667999
Q ss_pred CcEEEEeccCCCCCCCCCCCCCC-----ChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHH
Q 011641 79 ADIVFVSVNTPTKTQGLGAGKAA-----DLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~-----d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
||+||++.+.|.... ..+. +.+.+++..+.|.++. ++.++++- |.|..+.-.
T Consensus 70 aDiVViaag~~~kpG----~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivv-sNPvd~~t~ 126 (294)
T 1oju_A 70 SEIIVVTAGLARKPG----MTRLDLAHKNAGIIKDIAKKIVENA-PESKILVV-TNPMDVMTY 126 (294)
T ss_dssp CSEEEECCCCCCCSS----CCHHHHHHHHHHHHHHHHHHHHTTS-TTCEEEEC-SSSHHHHHH
T ss_pred CCEEEECCCCCCCCC----CcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEe-CCcchHHHH
Confidence 999999999886441 1122 2344566667777774 45665554 477776433
No 122
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=98.79 E-value=5.4e-08 Score=97.05 Aligned_cols=108 Identities=9% Similarity=0.096 Sum_probs=79.7
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.||..+|..+... |++|++||+++...+.... .+... .++++.++.||+
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~~--G~~V~~~d~~~~~~~~~~~-------------------~g~~~-~~l~ell~~aDv 203 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQGW--GATLQYHEAKALDTQTEQR-------------------LGLRQ-VACSELFASSDF 203 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTTS--CCEEEEECSSCCCHHHHHH-------------------HTEEE-CCHHHHHHHCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHHC--CCEEEEECCCCCcHhHHHh-------------------cCcee-CCHHHHHhhCCE
Confidence 6899999999999999999876 9999999998633222211 02333 378888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++++|......+ .. -+...+.++++.++|+.|+.++-..+.+.+.|++.
T Consensus 204 V~l~~P~t~~t~~-----li--------~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g 253 (330)
T 4e5n_A 204 ILLALPLNADTLH-----LV--------NAELLALVRPGALLVNPCRGSVVDEAAVLAALERG 253 (330)
T ss_dssp EEECCCCSTTTTT-----CB--------CHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEcCCCCHHHHH-----Hh--------CHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhC
Confidence 9999985322110 11 14566788999999999988777777888888764
No 123
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=98.78 E-value=2e-08 Score=98.96 Aligned_cols=103 Identities=16% Similarity=0.195 Sum_probs=77.0
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||++++ +. + .....++++.++.||+
T Consensus 125 ~~vgIIG~G~IG~~~A~~l~~~--G~~V~~~dr~~~--~~---~--------------------~~~~~~l~ell~~aDv 177 (303)
T 1qp8_A 125 EKVAVLGLGEIGTRVGKILAAL--GAQVRGFSRTPK--EG---P--------------------WRFTNSLEEALREARA 177 (303)
T ss_dssp CEEEEESCSTHHHHHHHHHHHT--TCEEEEECSSCC--CS---S--------------------SCCBSCSHHHHTTCSE
T ss_pred CEEEEEccCHHHHHHHHHHHHC--CCEEEEECCCcc--cc---C--------------------cccCCCHHHHHhhCCE
Confidence 6899999999999999999987 999999999764 11 1 0112456778899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|...... .+. -+...+.++++.++|+.|+.++-..+.+.+.+++.
T Consensus 178 V~l~~P~~~~t~-----------~~i--~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g 227 (303)
T 1qp8_A 178 AVCALPLNKHTR-----------GLV--KYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKER 227 (303)
T ss_dssp EEECCCCSTTTT-----------TCB--CHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHC
T ss_pred EEEeCcCchHHH-----------HHh--CHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhC
Confidence 999998642211 111 13456788999999999997776677788888764
No 124
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=98.78 E-value=7.8e-08 Score=96.86 Aligned_cols=107 Identities=14% Similarity=0.147 Sum_probs=78.5
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.||..+|..+... |++|++||++......... +... .++++.++.||+
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~f--G~~V~~~d~~~~~~~~~~~--------------------g~~~-~~l~ell~~aDv 233 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGF--RARIRVFDPWLPRSMLEEN--------------------GVEP-ASLEDVLTKSDF 233 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTS--CCEEEEECSSSCHHHHHHT--------------------TCEE-CCHHHHHHSCSE
T ss_pred CEEEEecCCcccHHHHHhhhhC--CCEEEEECCCCCHHHHhhc--------------------Ceee-CCHHHHHhcCCE
Confidence 5899999999999999998876 9999999997533221111 1233 478888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++++|..... ..+. -+.....++++.++|+.|..++-..+.+.+.|++.
T Consensus 234 V~l~~Plt~~T-----------~~li--~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 283 (365)
T 4hy3_A 234 IFVVAAVTSEN-----------KRFL--GAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSG 283 (365)
T ss_dssp EEECSCSSCC--------------CC--CHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTT
T ss_pred EEEcCcCCHHH-----------Hhhc--CHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcC
Confidence 99999854221 1111 14456778999999999988777777888888764
No 125
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=98.76 E-value=3.7e-08 Score=99.58 Aligned_cols=109 Identities=20% Similarity=0.202 Sum_probs=80.7
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCe-EEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIE-VAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~-V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
++|+|||+|.||..+|..+... |++ |++||+++...+...+ .+.....++++.++.||
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~--G~~~V~~~d~~~~~~~~~~~-------------------~g~~~~~~l~ell~~aD 223 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPF--NPKELLYYDYQALPKDAEEK-------------------VGARRVENIEELVAQAD 223 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG--CCSEEEEECSSCCCHHHHHH-------------------TTEEECSSHHHHHHTCS
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCcEEEEECCCccchhHHHh-------------------cCcEecCCHHHHHhcCC
Confidence 5899999999999999999887 897 9999998644433222 12444567888889999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
+|++|+|......+ ..+ +...+.++++.++|+.|+.++-..+.+.+.|++.
T Consensus 224 vV~l~~P~t~~t~~-----li~--------~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g 274 (364)
T 2j6i_A 224 IVTVNAPLHAGTKG-----LIN--------KELLSKFKKGAWLVNTARGAICVAEDVAAALESG 274 (364)
T ss_dssp EEEECCCCSTTTTT-----CBC--------HHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEECCCCChHHHH-----HhC--------HHHHhhCCCCCEEEECCCCchhCHHHHHHHHHcC
Confidence 99999985422110 111 3455778999999999987776777788888764
No 126
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=98.76 E-value=4.6e-08 Score=99.91 Aligned_cols=105 Identities=15% Similarity=0.175 Sum_probs=78.0
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.||..+|..+... |++|++||+++.. .. +......++++.++.||+
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~--G~~V~~yd~~~~~---------~~--------------~~~~~~~sl~ell~~aDv 211 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESL--GMTVRYYDTSDKL---------QY--------------GNVKPAASLDELLKTSDV 211 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECTTCCC---------CB--------------TTBEECSSHHHHHHHCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHHC--CCEEEEECCcchh---------cc--------------cCcEecCCHHHHHhhCCE
Confidence 5899999999999999999887 9999999986320 00 123455788999999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++++|......+ ..+ +.....++++.++|+.|+.++-..+.+.+.|++.
T Consensus 212 V~lhvPlt~~T~~-----li~--------~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g 261 (416)
T 3k5p_A 212 VSLHVPSSKSTSK-----LIT--------EAKLRKMKKGAFLINNARGSDVDLEALAKVLQEG 261 (416)
T ss_dssp EEECCCC-----C-----CBC--------HHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTT
T ss_pred EEEeCCCCHHHhh-----hcC--------HHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcC
Confidence 9999985322110 111 3455678999999999998887788888888764
No 127
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=98.75 E-value=2.4e-08 Score=102.72 Aligned_cols=209 Identities=14% Similarity=0.032 Sum_probs=115.1
Q ss_pred CcEEEEECCChhHHHHHHHHHHc----CCCCeEEEEECCHH-HHHHHH-cCCCCCcCCChHHHHhhhcCCCEEEecCHHH
Q 011641 1 MVKICCIGAGYVGGPTMAVIALK----CPSIEVAVVDISVS-RINAWN-SDQLPIYEPGLDGVVKQCRGKNLFFSTDVEK 74 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~----~~G~~V~~~D~~~~-~v~~l~-~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~ 74 (480)
++||+|||+|.||.++|.+|.+. +.|++|++.+++.+ ..+... .|.... .. .+.++++
T Consensus 54 iKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~--------------d~--ta~s~aE 117 (525)
T 3fr7_A 54 IKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEE--------------SG--TLGDIWE 117 (525)
T ss_dssp CSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTT--------------TT--CEEEHHH
T ss_pred CCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEe--------------cC--CCCCHHH
Confidence 47999999999999999999875 23688886665432 222222 221000 00 1246788
Q ss_pred hhccCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHH-HHHHHHHhcCCCCceEEe
Q 011641 75 HVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAE-AIEKILTHNSKGIKFQIL 153 (480)
Q Consensus 75 a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~-~l~~~l~~~~~g~~~~v~ 153 (480)
++++||+||++||.. ...+++++|.++++++++|++.+ |.+- .+.+.......+.++ +.
T Consensus 118 Aa~~ADVVILaVP~~---------------~~~eVl~eI~p~LK~GaILs~Aa----Gf~I~~le~~~i~~p~dv~V-Vr 177 (525)
T 3fr7_A 118 TVSGSDLVLLLISDA---------------AQADNYEKIFSHMKPNSILGLSH----GFLLGHLQSAGLDFPKNISV-IA 177 (525)
T ss_dssp HHHHCSEEEECSCHH---------------HHHHHHHHHHHHSCTTCEEEESS----SHHHHHHHHTTCCCCTTSEE-EE
T ss_pred HHhcCCEEEECCChH---------------HHHHHHHHHHHhcCCCCeEEEeC----CCCHHHHhhhcccCCCCCcE-EE
Confidence 899999999998831 23456778999999999976543 4322 222100011112232 33
Q ss_pred eCCcccccccccc-----c----cCCCC-eEEEecCCCcchHHHHHHHHHHHhccCCCCeEEeCCchhHHHhhhh-Hh-H
Q 011641 154 SNPEFLAEGTAIQ-----D----LFNPD-RVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLA-AN-A 221 (480)
Q Consensus 154 ~~Pe~~~~G~a~~-----~----~~~~~-~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~~~~~~~ae~~Kl~-~N-~ 221 (480)
.+|.. ||..+. + +...+ -+-+..+. +.+..+.+..++..++. ..+..++...---..++ +- +
T Consensus 178 VmPNt--Pg~~VR~~y~~G~~~~g~Gv~~liAv~qd~---tgea~e~alala~aiG~-~~vieTtf~eE~e~DLfgeqtv 251 (525)
T 3fr7_A 178 VCPKG--MGPSVRRLYVQGKEINGAGINSSFAVHQDV---DGRATDVALGWSVALGS-PFTFATTLEQEYKSDIFGERGI 251 (525)
T ss_dssp EEESS--CHHHHHHHHHHHTTSTTCSCCEEEEEEECS---SSCHHHHHHHHHHHTTC-SEEEECCHHHHHHHHHHHHHTT
T ss_pred EecCC--CchhHHHHHhcccccccCCccEEEEcCCCC---CHHHHHHHHHHHHHCCC-CeeeeeeeeeehhHhhhhhHhh
Confidence 45532 333210 1 01223 22222221 34678899999999874 33433443311111111 11 1
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHh
Q 011641 222 FLAQRISSVNAMSALCEATGANVSQVAFAV 251 (480)
Q Consensus 222 ~~~~~ia~~nE~~~l~~~~Gid~~~v~~~~ 251 (480)
+.....+++.-+.....+.|++++..+..+
T Consensus 252 LsG~~pAlieA~~d~lVe~G~~pe~Ay~~~ 281 (525)
T 3fr7_A 252 LLGAVHGIVEALFRRYTEQGMDEEMAYKNT 281 (525)
T ss_dssp TTHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred hcCcHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 223334566667777778999987665544
No 128
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=98.74 E-value=8.6e-08 Score=95.13 Aligned_cols=119 Identities=18% Similarity=0.252 Sum_probs=79.4
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCC--CeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccC
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPS--IEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G--~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
|||+|||+|++|.++|..|+.+ | .+|.++|+++++++..... +.... ......++++.+..+++++|
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~~--~~~~ei~L~Di~~~~~~g~~~d--------l~~~~-~~~~~~~~v~~~~~~a~~~a 75 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVNQ--SIVDELVIIDLDTEKVRGDVMD--------LKHAT-PYSPTTVRVKAGEYSDCHDA 75 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--CSCSEEEEECSCHHHHHHHHHH--------HHHHG-GGSSSCCEEEECCGGGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCChhHhhhhhhh--------HHhhh-hhcCCCeEEEeCCHHHhCCC
Confidence 5999999999999999999987 5 5999999999876642210 00100 01111233433446679999
Q ss_pred cEEEEeccCCCCCCCCCCCC----CCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHH
Q 011641 80 DIVFVSVNTPTKTQGLGAGK----AADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~----~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
|+||++++.|..... ++ ..+...++++.+.|.++. ++.+|++ .|.|.++...
T Consensus 76 DvVvi~ag~~~~~g~---~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv-~tNPv~~~t~ 131 (317)
T 3d0o_A 76 DLVVICAGAAQKPGE---TRLDLVSKNLKIFKSIVGEVMASK-FDGIFLV-ATNPVDILAY 131 (317)
T ss_dssp SEEEECCCCCCCTTC---CHHHHHHHHHHHHHHHHHHHHHTT-CCSEEEE-CSSSHHHHHH
T ss_pred CEEEECCCCCCCCCC---cHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEE-ecCcHHHHHH
Confidence 999999998865310 00 123456677777887774 5666666 6789888544
No 129
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=98.74 E-value=1.1e-07 Score=95.01 Aligned_cols=106 Identities=17% Similarity=0.239 Sum_probs=79.2
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.||..+|..+... |++|++||++++. ... ...... +++++++.||+
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~--~~~--------------------~~~~~~-~l~ell~~aDv 203 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAM--GAKVIAYDVAYNP--EFE--------------------PFLTYT-DFDTVLKEADI 203 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCG--GGT--------------------TTCEEC-CHHHHHHHCSE
T ss_pred CeEEEEecCHHHHHHHHHHhhC--CCEEEEECCChhh--hhh--------------------cccccc-CHHHHHhcCCE
Confidence 5899999999999999999987 9999999998643 111 112333 78888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcC
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNS 145 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~ 145 (480)
|++++|......+ ..+ +.....++++.++|+.|+.++-..+.+.+.|++..
T Consensus 204 V~l~~Plt~~t~~-----li~--------~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~ 254 (343)
T 2yq5_A 204 VSLHTPLFPSTEN-----MIG--------EKQLKEMKKSAYLINCARGELVDTGALIKALQDGE 254 (343)
T ss_dssp EEECCCCCTTTTT-----CBC--------HHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTS
T ss_pred EEEcCCCCHHHHH-----Hhh--------HHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCC
Confidence 9999985322211 111 34456789999999999888777788888887643
No 130
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=98.73 E-value=6e-08 Score=99.21 Aligned_cols=105 Identities=17% Similarity=0.143 Sum_probs=79.1
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.||..+|..+... |++|++||+++.. . .+......++++.++.||+
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~-----~------------------~~~~~~~~~l~ell~~aDv 200 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESL--GMYVYFYDIENKL-----P------------------LGNATQVQHLSDLLNMSDV 200 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCC-----C------------------CTTCEECSCHHHHHHHCSE
T ss_pred CEEEEEeECHHHHHHHHHHHHC--CCEEEEEcCCchh-----c------------------cCCceecCCHHHHHhcCCE
Confidence 5899999999999999999887 9999999986431 0 0123455678888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++++|......+ -.+ +.....++++.++|+.|+..+-..+.+.+.|++.
T Consensus 201 V~l~~P~t~~t~~-----li~--------~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g 250 (404)
T 1sc6_A 201 VSLHVPENPSTKN-----MMG--------AKEISLMKPGSLLINASRGTVVDIPALADALASK 250 (404)
T ss_dssp EEECCCSSTTTTT-----CBC--------HHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTT
T ss_pred EEEccCCChHHHH-----Hhh--------HHHHhhcCCCeEEEECCCChHHhHHHHHHHHHcC
Confidence 9999985422111 111 3345678999999999998777777888888763
No 131
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=98.71 E-value=1.1e-08 Score=101.18 Aligned_cols=107 Identities=9% Similarity=0.113 Sum_probs=77.9
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.||..+|..+... |++|++||++++..+. +. ......++++.++.||+
T Consensus 140 ~tvGIiG~G~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~------------~~---------~~~~~~~l~ell~~aDi 196 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKVAESLQAW--GFPLRCWSRSRKSWPG------------VE---------SYVGREELRAFLNQTRV 196 (315)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT--TCCEEEEESSCCCCTT------------CE---------EEESHHHHHHHHHTCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHHC--CCEEEEEcCCchhhhh------------hh---------hhcccCCHHHHHhhCCE
Confidence 6899999999999999999987 9999999997642110 00 01112467888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++++|......+ .. -+.....++++.++|+.|..+.-..+.+.+.|++.
T Consensus 197 V~l~~Plt~~t~~-----li--------~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g 246 (315)
T 3pp8_A 197 LINLLPNTAQTVG-----II--------NSELLDQLPDGAYVLNLARGVHVQEADLLAALDSG 246 (315)
T ss_dssp EEECCCCCGGGTT-----CB--------SHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEecCCchhhhh-----hc--------cHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhC
Confidence 9999984321110 11 13456778999999999988777778888888764
No 132
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=98.71 E-value=1.2e-07 Score=94.10 Aligned_cols=119 Identities=22% Similarity=0.276 Sum_probs=79.5
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCC-eEEEEECCHHHHHHHHcCCCCCcCCChHHHHhh-hcCCCEEEecCHHHhhcc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFSTDVEKHVSE 78 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~ 78 (480)
+|||+|||+|.||.++|..|+.+ |+ +|+++|+++++++..... +...... ....++++++|+ +++++
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~--~~~~v~L~Di~~~~~~g~~~d--------l~~~~~~~~~~~~v~~t~d~-~a~~~ 75 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLK--ELGDVVLFDIAEGTPQGKGLD--------IAESSPVDGFDAKFTGANDY-AAIEG 75 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSSSHHHHHHHH--------HHHHHHHHTCCCCEEEESSG-GGGTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCeEEEEeCCchhHHHHHHH--------HhchhhhcCCCCEEEEeCCH-HHHCC
Confidence 37999999999999999999998 77 999999999887543210 1111000 012457778887 67999
Q ss_pred CcEEEEeccCCCCCCCCCCCCCC-----ChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHH
Q 011641 79 ADIVFVSVNTPTKTQGLGAGKAA-----DLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~-----d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
||+||++.++|.... ..+. +...+++..+.|.++. ++.++++- |.|..+.-.
T Consensus 76 aDiVIiaag~p~k~G----~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivv-tNPvd~~t~ 132 (324)
T 3gvi_A 76 ADVVIVTAGVPRKPG----MSRDDLLGINLKVMEQVGAGIKKYA-PEAFVICI-TNPLDAMVW 132 (324)
T ss_dssp CSEEEECCSCCCC---------CHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC-CSSHHHHHH
T ss_pred CCEEEEccCcCCCCC----CCHHHHHHhhHHHHHHHHHHHHHHC-CCeEEEec-CCCcHHHHH
Confidence 999999998886541 1122 3345566677777776 45555443 467665443
No 133
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.70 E-value=7.1e-08 Score=95.87 Aligned_cols=113 Identities=20% Similarity=0.281 Sum_probs=77.6
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCC--eEEEEECCHHHHHH----HHcCCCCCcCCChHHHHhhhcCCCEEE-ecCHHH
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVSRINA----WNSDQLPIYEPGLDGVVKQCRGKNLFF-STDVEK 74 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~----l~~~~~~~~e~~l~~~~~~~~~~~l~~-t~d~~~ 74 (480)
|||+|||+|+||.++|..|+.. |+ +|+++|+++++++. |+.+ .++.. ..+++ +++. +
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~--~~~~~l~l~D~~~~k~~g~a~DL~~~-~~~~~------------~~v~i~~~~~-~ 69 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQ--GITDELVVIDVNKEKAMGDVMDLNHG-KAFAP------------QPVKTSYGTY-E 69 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSCHHHHHHHHHHHHHT-GGGSS------------SCCEEEEECG-G
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCceEEEEecchHHHHHHHHHHHhc-ccccc------------CCeEEEeCcH-H
Confidence 7999999999999999999988 65 99999999998776 5544 33321 12233 3454 5
Q ss_pred hhccCcEEEEeccCCCCCCCCCCCCCCC-----hHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHH
Q 011641 75 HVSEADIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARVIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 75 a~~~aDvVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
++++||+||+|.++|..... .+.| .+.+++..+.+.++.+ +.++++ -|.|..+...
T Consensus 70 a~~~aDvVvi~ag~p~kpG~----~R~dL~~~N~~Iv~~i~~~I~~~~p-~a~vlv-vtNPvd~~t~ 130 (326)
T 3pqe_A 70 DCKDADIVCICAGANQKPGE----TRLELVEKNLKIFKGIVSEVMASGF-DGIFLV-ATNPVDILTY 130 (326)
T ss_dssp GGTTCSEEEECCSCCCCTTC----CHHHHHHHHHHHHHHHHHHHHHTTC-CSEEEE-CSSSHHHHHH
T ss_pred HhCCCCEEEEecccCCCCCc----cHHHHHHHHHHHHHHHHHHHHHhcC-CeEEEE-cCChHHHHHH
Confidence 69999999999998865411 1223 3445666677777654 555544 3567765433
No 134
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=98.69 E-value=4.7e-08 Score=96.68 Aligned_cols=100 Identities=16% Similarity=0.160 Sum_probs=74.6
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||++++..+ .. ..++++.++.||+
T Consensus 145 ~~vgIIG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~~-------------------------~~-~~~l~ell~~aDv 196 (311)
T 2cuk_A 145 LTLGLVGMGRIGQAVAKRALAF--GMRVVYHARTPKPLP-------------------------YP-FLSLEELLKEADV 196 (311)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCSSS-------------------------SC-BCCHHHHHHHCSE
T ss_pred CEEEEEEECHHHHHHHHHHHHC--CCEEEEECCCCcccc-------------------------cc-cCCHHHHHhhCCE
Confidence 6899999999999999999987 999999999764321 01 2466777899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHH
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILT 142 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~ 142 (480)
|++|+|......+ ..+ +...+.++++.++|+.|+..+-..+.+.+.++
T Consensus 197 V~l~~p~~~~t~~-----li~--------~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~ 244 (311)
T 2cuk_A 197 VSLHTPLTPETHR-----LLN--------RERLFAMKRGAILLNTARGALVDTEALVEALR 244 (311)
T ss_dssp EEECCCCCTTTTT-----CBC--------HHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT
T ss_pred EEEeCCCChHHHh-----hcC--------HHHHhhCCCCcEEEECCCCCccCHHHHHHHHh
Confidence 9999986422100 111 23456789999999999877666677877776
No 135
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.67 E-value=1.6e-07 Score=80.64 Aligned_cols=126 Identities=13% Similarity=0.226 Sum_probs=77.2
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcC-CCCCcCCChHHHHhhhcCCCEEEecCH---HH-hh
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSD-QLPIYEPGLDGVVKQCRGKNLFFSTDV---EK-HV 76 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~-~~~~~e~~l~~~~~~~~~~~l~~t~d~---~~-a~ 76 (480)
|+|+|+|+|.+|..+|..|.+. |++|+++|+++++++.+.+. .......+ .++. .+ .+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~--g~~v~~~d~~~~~~~~~~~~~~~~~~~~d---------------~~~~~~l~~~~~ 67 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK--GHDIVLIDIDKDICKKASAEIDALVINGD---------------CTKIKTLEDAGI 67 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCSSEEEESC---------------TTSHHHHHHTTT
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHhcCcEEEEcC---------------CCCHHHHHHcCc
Confidence 7999999999999999999998 89999999999998887642 11110000 0111 11 25
Q ss_pred ccCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCC
Q 011641 77 SEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNP 156 (480)
Q Consensus 77 ~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~P 156 (480)
.++|+||+|+|.+. ....+..+++.++++.+|+. + ..++..+ .+++.+ .+ .+.+|
T Consensus 68 ~~~d~vi~~~~~~~---------------~~~~~~~~~~~~~~~~ii~~-~-~~~~~~~----~l~~~g--~~--~v~~p 122 (140)
T 1lss_A 68 EDADMYIAVTGKEE---------------VNLMSSLLAKSYGINKTIAR-I-SEIEYKD----VFERLG--VD--VVVSP 122 (140)
T ss_dssp TTCSEEEECCSCHH---------------HHHHHHHHHHHTTCCCEEEE-C-SSTTHHH----HHHHTT--CS--EEECH
T ss_pred ccCCEEEEeeCCch---------------HHHHHHHHHHHcCCCEEEEE-e-cCHhHHH----HHHHcC--CC--EEECH
Confidence 68999999977421 12233344555666676653 2 2334433 333332 22 45788
Q ss_pred ccccccccccccC
Q 011641 157 EFLAEGTAIQDLF 169 (480)
Q Consensus 157 e~~~~G~a~~~~~ 169 (480)
++...+.....+.
T Consensus 123 ~~~~~~~~~~~~~ 135 (140)
T 1lss_A 123 ELIAANYIEKLIE 135 (140)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 7766554443333
No 136
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.66 E-value=2.1e-08 Score=99.41 Aligned_cols=115 Identities=12% Similarity=0.163 Sum_probs=81.4
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCC-eEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
++|+|||+|.||..++..|++.. |+ +|++||+++++.+.+.+.. ...+..+++++++++++|
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~~-g~~~V~v~dr~~~~~~~l~~~~----------------~~~~~~~~~~~e~v~~aD 198 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQF-SFKEVRIWNRTKENAEKFADTV----------------QGEVRVCSSVQEAVAGAD 198 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC-CCSEEEEECSSHHHHHHHHHHS----------------SSCCEECSSHHHHHTTCS
T ss_pred cEEEEECCcHHHHHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHh----------------hCCeEEeCCHHHHHhcCC
Confidence 68999999999999999998752 44 8999999999988876421 002456788888899999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCc
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPE 157 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (480)
+|++|+|... . ++.. +.++++++|+..|+..|+. +++.+.+.+.+ ..++.+++
T Consensus 199 iVi~atp~~~-~----------------v~~~--~~l~~g~~vi~~g~~~p~~-~el~~~~~~~g----~~~vD~~~ 251 (312)
T 2i99_A 199 VIITVTLATE-P----------------ILFG--EWVKPGAHINAVGASRPDW-RELDDELMKEA----VLYVDSQE 251 (312)
T ss_dssp EEEECCCCSS-C----------------CBCG--GGSCTTCEEEECCCCSTTC-CSBCHHHHHHS----EEEESCHH
T ss_pred EEEEEeCCCC-c----------------ccCH--HHcCCCcEEEeCCCCCCCc-eeccHHHHhcC----EEEECCHH
Confidence 9999987421 1 0111 4678899999888887776 34433343332 24456443
No 137
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=98.64 E-value=2.7e-07 Score=91.53 Aligned_cols=119 Identities=15% Similarity=0.160 Sum_probs=81.3
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCC--eEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhcc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE 78 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (480)
+|||+|||+|.||.++|..|+.+ |+ +|.++|+++++++..... +..........++..++|+++ +++
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~--g~~~ev~L~Di~~~~~~g~a~D--------L~~~~~~~~~~~i~~t~d~~~-~~d 89 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMK--DLADEVALVDVMEDKLKGEMMD--------LEHGSLFLHTAKIVSGKDYSV-SAG 89 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHH--CCCSEEEEECSCHHHHHHHHHH--------HHHHGGGSCCSEEEEESSSCS-CSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEECCHHHHHHHHHH--------hhhhhhcccCCeEEEcCCHHH-hCC
Confidence 47999999999999999999988 65 999999999887654321 000000001235677889876 999
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCC-----hHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHH
Q 011641 79 ADIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARVIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
||+||++.++|.... ..+.| .+.+++..+.+.++. ++.++++- |.|..+.-.
T Consensus 90 aDiVIitaG~p~kpG----~tR~dll~~N~~I~k~i~~~I~k~~-P~a~ilvv-tNPvdi~t~ 146 (330)
T 3ldh_A 90 SKLVVITAGARQQEG----ESRLNLVQRNVNIFKFIIPNIVKHS-PDCLKELH-PELGTDKNK 146 (330)
T ss_dssp CSEEEECCSCCCCSS----CCTTGGGHHHHHHHHHHHHHHHHHC-TTCEEEEC-SSSHHHHHH
T ss_pred CCEEEEeCCCCCCCC----CCHHHHHHhhHHHHHHHHHHHHhhC-CCceEEeC-CCccHHHHH
Confidence 999999999886541 11233 344566777888874 56655543 467766443
No 138
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=98.62 E-value=2.1e-07 Score=92.99 Aligned_cols=118 Identities=18% Similarity=0.215 Sum_probs=77.4
Q ss_pred CcEEEEECC-ChhHHHHHHHHHHcCCCCeEEEEECCHHHHHH----HHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHh
Q 011641 1 MVKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINA----WNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKH 75 (480)
Q Consensus 1 ~mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~----l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a 75 (480)
+|||+|||+ |++|.++|..++..+...+|.++|+++++++. |+.+. + + ..++++++++.++
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~--~--~----------~~~i~~t~d~~~a 73 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG--F--E----------GLNLTFTSDIKEA 73 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC--C--T----------TCCCEEESCHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc--C--C----------CCceEEcCCHHHH
Confidence 379999997 99999999999987222589999999987765 33321 1 0 1357788998888
Q ss_pred hccCcEEEEeccCCCCCCCCCCCCCCC-----hHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHH
Q 011641 76 VSEADIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 76 ~~~aDvVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
+++||+||+|..+|.... ..+.| ...+++..+.+.++.+...+|++ -|.|..+.-.+
T Consensus 74 l~dADvVvitaG~p~kpG----~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlv-vsNPvd~~t~i 135 (343)
T 3fi9_A 74 LTDAKYIVSSGGAPRKEG----MTREDLLKGNAEIAAQLGKDIKSYCPDCKHVII-IFNPADITGLV 135 (343)
T ss_dssp HTTEEEEEECCC-----------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEE-CSSSHHHHHHH
T ss_pred hCCCCEEEEccCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEE-ecCchHHHHHH
Confidence 999999999998876431 11233 24445566667777654432333 36787765443
No 139
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=98.60 E-value=4e-07 Score=90.34 Aligned_cols=119 Identities=21% Similarity=0.265 Sum_probs=79.9
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCC-eEEEEECCHHHHHHHHcCCCCCcCCChHHHHhh-hcCCCEEEecCHHHhhcc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFSTDVEKHVSE 78 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~ 78 (480)
+|||+|||+|.||.++|..|+.+ |+ +|.++|+++++++..... +...... ....+++.+++. +++++
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~--~~~~v~l~Di~~~~~~g~a~d--------L~~~~~~~~~~~~v~~t~d~-~a~~~ 73 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIK--QLGDVVLFDIAQGMPNGKALD--------LLQTCPIEGVDFKVRGTNDY-KDLEN 73 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSSSHHHHHHHH--------HHTTHHHHTCCCCEEEESCG-GGGTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCceEEEEeCChHHHHHHHHH--------HHhhhhhcCCCcEEEEcCCH-HHHCC
Confidence 37999999999999999999987 66 999999999876543211 0000000 012356667786 56999
Q ss_pred CcEEEEeccCCCCCCCCCCCCCC-----ChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHH
Q 011641 79 ADIVFVSVNTPTKTQGLGAGKAA-----DLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~-----d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
||+||++.+.|.... ..+. +.+.+++..+.|.++. ++.++++- |.|.++.-.
T Consensus 74 aDvVIi~ag~p~k~G----~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivv-tNPvd~~t~ 130 (321)
T 3p7m_A 74 SDVVIVTAGVPRKPG----MSRDDLLGINIKVMQTVGEGIKHNC-PNAFVICI-TNPLDIMVN 130 (321)
T ss_dssp CSEEEECCSCCCCTT----CCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC-CSSHHHHHH
T ss_pred CCEEEEcCCcCCCCC----CCHHHHHHHhHHHHHHHHHHHHHHC-CCcEEEEe-cCchHHHHH
Confidence 999999998886541 1111 3455667777777777 45555543 678776543
No 140
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=98.59 E-value=3.3e-07 Score=90.72 Aligned_cols=113 Identities=18% Similarity=0.240 Sum_probs=80.5
Q ss_pred cEEEEECC-ChhHHHHHHHHHHcCCC--CeEEEEECCHHHHH--HHHcCCCCCcCCChHHHHhhhcCCCEEE---ecCHH
Q 011641 2 VKICCIGA-GYVGGPTMAVIALKCPS--IEVAVVDISVSRIN--AWNSDQLPIYEPGLDGVVKQCRGKNLFF---STDVE 73 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G--~~V~~~D~~~~~v~--~l~~~~~~~~e~~l~~~~~~~~~~~l~~---t~d~~ 73 (480)
|||+|||+ |++|.+++..|+.. | ++|.++|+++.... .|.... ...+++. ++|++
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~--~~~~ev~L~Di~~~~~~a~dL~~~~---------------~~~~l~~~~~t~d~~ 63 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNS--PLVSRLTLYDIAHTPGVAADLSHIE---------------TRATVKGYLGPEQLP 63 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTC--TTCSEEEEEESSSHHHHHHHHTTSS---------------SSCEEEEEESGGGHH
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCCcEEEEEeCCccHHHHHHHhccC---------------cCceEEEecCCCCHH
Confidence 79999998 99999999999987 6 79999999873222 222211 0123555 36788
Q ss_pred HhhccCcEEEEeccCCCCCCCCCCCCCCCh-----HHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHH
Q 011641 74 KHVSEADIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARVIADVSKSDKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 74 ~a~~~aDvVii~Vptp~~~~~~~~~~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
+++++||+||++.+.|.... ..+.|+ ..++++.+.+.++.+ +.++++ .|.|.++...+
T Consensus 64 ~a~~~aDvVvi~ag~~~~~g----~~r~dl~~~n~~i~~~i~~~i~~~~p-~a~viv-~sNPv~~~~~i 126 (314)
T 1mld_A 64 DCLKGCDVVVIPAGVPRKPG----MTRDDLFNTNATIVATLTAACAQHCP-DAMICI-ISNPVNSTIPI 126 (314)
T ss_dssp HHHTTCSEEEECCSCCCCTT----CCGGGGHHHHHHHHHHHHHHHHHHCT-TSEEEE-CSSCHHHHHHH
T ss_pred HHhCCCCEEEECCCcCCCCC----CcHHHHHHHHHHHHHHHHHHHHhhCC-CeEEEE-ECCCcchhHHH
Confidence 88999999999998886441 123455 677788888888775 445544 47888876543
No 141
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=98.58 E-value=7.1e-07 Score=88.27 Aligned_cols=118 Identities=25% Similarity=0.322 Sum_probs=78.2
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCC-eEEEEECC--HHHHHHHHcCCCCCcCCChHHHHhhh-cCCCEEEecCHHHhhc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDIS--VSRINAWNSDQLPIYEPGLDGVVKQC-RGKNLFFSTDVEKHVS 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~--~~~v~~l~~~~~~~~e~~l~~~~~~~-~~~~l~~t~d~~~a~~ 77 (480)
+||+|||+|.||.++|..|+.+ |+ +|+++|++ +++.+..... +....... ...+++.+++++ +++
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~--g~~~v~l~D~~~~~~~~~g~a~d--------l~~~~~~~~~~~~i~~t~d~~-a~~ 77 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQK--ELADVVLVDIPQLENPTKGKALD--------MLEASPVQGFDANIIGTSDYA-DTA 77 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEEECCGGGHHHHHHHHHH--------HHHHHHHHTCCCCEEEESCGG-GGT
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCeEEEEeccchHHHHHHhhhh--------HHHhhhhccCCCEEEEcCCHH-HhC
Confidence 5899999999999999999998 88 99999999 5555544311 11110000 234677788865 599
Q ss_pred cCcEEEEeccCCCCCCCCCCCCCCC-----hHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHH
Q 011641 78 EADIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARVIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
+||+||++.++|..+.. .+.| .+.+++..+.+.++.+ +.++++- |.|..+.-.
T Consensus 78 ~aDvVIiaag~p~kpg~----~R~dl~~~N~~i~~~i~~~i~~~~p-~a~vlvv-sNPvd~~t~ 135 (315)
T 3tl2_A 78 DSDVVVITAGIARKPGM----SRDDLVATNSKIMKSITRDIAKHSP-NAIIVVL-TNPVDAMTY 135 (315)
T ss_dssp TCSEEEECCSCCCCTTC----CHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEEC-CSSHHHHHH
T ss_pred CCCEEEEeCCCCCCCCC----CHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEC-CChHHHHHH
Confidence 99999999998865411 1222 2345666677777754 5555443 467666443
No 142
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=98.57 E-value=8.5e-08 Score=95.80 Aligned_cols=106 Identities=16% Similarity=0.208 Sum_probs=78.1
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||+++++. +.+. .++.+++++.++.||+
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~--~~~~--------------------~~~~~~l~ell~~aDv 202 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGF--GAKVITYDIFRNPE--LEKK--------------------GYYVDSLDDLYKQADV 202 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCHH--HHHT--------------------TCBCSCHHHHHHHCSE
T ss_pred CEEEEEccCHHHHHHHHHHHHC--CCEEEEECCCcchh--HHhh--------------------CeecCCHHHHHhhCCE
Confidence 5899999999999999999987 99999999987653 2211 1122467788899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|......+ -.+ +...+.++++.++|+.|+..+-..+.+.+.|++.
T Consensus 203 V~l~~p~~~~t~~-----li~--------~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g 252 (333)
T 1j4a_A 203 ISLHVPDVPANVH-----MIN--------DESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSG 252 (333)
T ss_dssp EEECSCCCGGGTT-----CBS--------HHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEcCCCcHHHHH-----HHh--------HHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 9999985322100 111 3345678899999999987777777888888764
No 143
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=98.54 E-value=3.9e-07 Score=90.77 Aligned_cols=113 Identities=19% Similarity=0.248 Sum_probs=77.6
Q ss_pred CcEEEEEC-CChhHHHHHHHHHHcCCC--CeEEEEECCHHH--HHHHHcCCCCCcCCChHHHHhhhcCCCEEE---ecCH
Q 011641 1 MVKICCIG-AGYVGGPTMAVIALKCPS--IEVAVVDISVSR--INAWNSDQLPIYEPGLDGVVKQCRGKNLFF---STDV 72 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G--~~V~~~D~~~~~--v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~---t~d~ 72 (480)
+|||+|+| +|++|.+++..|+.. | ++|+++|++++. +..+..... ...++. ++|+
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~--g~~~ev~l~Di~~~~~~~~dL~~~~~---------------~~~v~~~~~t~d~ 70 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMN--PLVSVLHLYDVVNAPGVTADISHMDT---------------GAVVRGFLGQQQL 70 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHC--TTEEEEEEEESSSHHHHHHHHHTSCS---------------SCEEEEEESHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHhC--CCCCEEEEEeCCCcHhHHHHhhcccc---------------cceEEEEeCCCCH
Confidence 38999999 899999999999987 7 899999998762 222332110 013444 4577
Q ss_pred HHhhccCcEEEEeccCCCCCCCCCCCCCCCh-----HHHHHHHHHHHhhCCCCcEEEEecCCCcchHHH
Q 011641 73 EKHVSEADIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARVIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 73 ~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
++++++||+||+|.+.|.... ....|+ ..++++++.+.+.. ++.+|++ +|+|.+++-.
T Consensus 71 ~~al~gaDvVi~~ag~~~~~g----~~r~dl~~~N~~~~~~i~~~i~~~~-p~~~viv-~SNPv~~~~~ 133 (326)
T 1smk_A 71 EAALTGMDLIIVPAGVPRKPG----MTRDDLFKINAGIVKTLCEGIAKCC-PRAIVNL-ISNPVNSTVP 133 (326)
T ss_dssp HHHHTTCSEEEECCCCCCCSS----CCCSHHHHHHHHHHHHHHHHHHHHC-TTSEEEE-CCSSHHHHHH
T ss_pred HHHcCCCCEEEEcCCcCCCCC----CCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEE-ECCchHHHHH
Confidence 888999999999998876431 113344 45566666666665 4555555 6899988543
No 144
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=98.54 E-value=6.8e-07 Score=88.63 Aligned_cols=117 Identities=22% Similarity=0.296 Sum_probs=74.9
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCC--eEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccC
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
|||+|||+|.+|.+++..|+.+ +. ++.++|+++++++..... +..... .. ..++++.+..+++++|
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~--~~~~el~L~Di~~~~~~g~~~d--------l~~~~~-~~-~~~~v~~~~~~a~~~a 73 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ--GIAEEFVIVDVVKDRTKGDALD--------LEDAQA-FT-APKKIYSGEYSDCKDA 73 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHH--------HHGGGG-GS-CCCEEEECCGGGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHcC--CCCCEEEEEeCCchHHHHHHHH--------HHHHHH-hc-CCeEEEECCHHHhCCC
Confidence 7999999999999999999987 54 899999999887753321 000000 00 2334444445679999
Q ss_pred cEEEEeccCCCCCCCCCCCCCCCh-----HHHHHHHHHHHhhCCCCcEEEEecCCCcchHHH
Q 011641 80 DIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARVIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
|+||++.+.|.... ..+.|+ ..+++..+.+.++. ++.++++ -|.|.++...
T Consensus 74 DvVii~ag~~~~~g----~~R~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv-~tNPv~~~t~ 129 (318)
T 1ez4_A 74 DLVVITAGAPQKPG----ESRLDLVNKNLNILSSIVKPVVDSG-FDGIFLV-AANPVDILTY 129 (318)
T ss_dssp SEEEECCCC--------------CHHHHHHHHHHHHHHHHHTT-CCSEEEE-CSSSHHHHHH
T ss_pred CEEEECCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEE-eCCcHHHHHH
Confidence 99999998876431 112344 55667777777775 4565555 3788887544
No 145
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=98.52 E-value=1.2e-07 Score=94.66 Aligned_cols=105 Identities=12% Similarity=0.151 Sum_probs=77.9
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||++++.. + .. . ... .++++.++.||+
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~--~-~~------------------~-~~~-~~l~ell~~aDv 200 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKGF--GAKVIAYDPYPMKG--D-HP------------------D-FDY-VSLEDLFKQSDV 200 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCSS--C-CT------------------T-CEE-CCHHHHHHHCSE
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCEEEEECCCcchh--h-Hh------------------c-ccc-CCHHHHHhcCCE
Confidence 5899999999999999999987 99999999975421 0 00 1 222 377888899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|......+ ..+ +...+.++++.++|+.|+.++-..+.+.+.|++.
T Consensus 201 V~~~~P~~~~t~~-----li~--------~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g 250 (333)
T 1dxy_A 201 IDLHVPGIEQNTH-----IIN--------EAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSG 250 (333)
T ss_dssp EEECCCCCGGGTT-----SBC--------HHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTT
T ss_pred EEEcCCCchhHHH-----HhC--------HHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 9999986432110 111 3455678999999999998777778888888764
No 146
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=98.52 E-value=5.8e-07 Score=93.57 Aligned_cols=79 Identities=20% Similarity=0.204 Sum_probs=57.8
Q ss_pred cEEEEECCChhH--HHHHHHHHHc--CCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhh-hcCCCEEEecCHHHhh
Q 011641 2 VKICCIGAGYVG--GPTMAVIALK--CPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFSTDVEKHV 76 (480)
Q Consensus 2 mkI~VIGlG~~G--~~lA~~La~~--~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~ 76 (480)
|||+|||+|.|| .++|..|+.. .+|++|++||+++++++.++.. ....+.. ....++++++|+++++
T Consensus 4 ~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~--------~~~~l~~~~~~~~I~~ttD~~eal 75 (480)
T 1obb_A 4 VKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTI--------AKKYVEEVGADLKFEKTMNLDDVI 75 (480)
T ss_dssp CEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHH--------HHHHHHHTTCCCEEEEESCHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHH--------HHHHhccCCCCcEEEEECCHHHHh
Confidence 699999999974 5557777742 1378999999999998875531 1111111 1134688899998889
Q ss_pred ccCcEEEEeccC
Q 011641 77 SEADIVFVSVNT 88 (480)
Q Consensus 77 ~~aDvVii~Vpt 88 (480)
++||+||+++|+
T Consensus 76 ~dAD~VIiaagv 87 (480)
T 1obb_A 76 IDADFVINTAMV 87 (480)
T ss_dssp TTCSEEEECCCT
T ss_pred CCCCEEEECCCc
Confidence 999999999975
No 147
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=98.52 E-value=1.1e-06 Score=87.10 Aligned_cols=121 Identities=17% Similarity=0.195 Sum_probs=76.4
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+|||+|||+|.||.++|..++.++...+|+++|+++++.+....+ +.+... ......+++++..+++++||
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~d--------l~~~~~-~~~~~~~i~~~~~~al~~aD 76 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMD--------FNHGKV-FAPKPVDIWHGDYDDCRDAD 76 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHH--------HHHHTT-SSSSCCEEEECCGGGTTTCS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhh--------HHHHhh-hcCCCeEEEcCcHHHhCCCC
Confidence 379999999999999999998872224899999998866643221 000000 00112344344456799999
Q ss_pred EEEEeccCCCCCCCCCCCCCCC-----hHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHH
Q 011641 81 IVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARVIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
+||+|.|.|.... ..+.| .+.+.++++.+.++. ++.++++ -|.|......
T Consensus 77 vViia~~~~~~~g----~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~~iv-~tNPv~~~~~ 131 (316)
T 1ldn_A 77 LVVICAGANQKPG----ETRLDLVDKNIAIFRSIVESVMASG-FQGLFLV-ATNPVDILTY 131 (316)
T ss_dssp EEEECCSCCCCTT----TCSGGGHHHHHHHHHHHHHHHHHHT-CCSEEEE-CSSSHHHHHH
T ss_pred EEEEcCCCCCCCC----CCHHHHHHcChHHHHHHHHHHHHHC-CCCEEEE-eCCchHHHHH
Confidence 9999998876431 11223 244556667777776 4555554 4678776544
No 148
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=98.51 E-value=2.9e-07 Score=92.97 Aligned_cols=108 Identities=17% Similarity=0.142 Sum_probs=77.5
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.||..+|..+... |++|++||++.+..+ . + . ...+++++++.||+
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~--G~~V~~~d~~~~~~~----~------------------~-~-~~~sl~ell~~aDi 173 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEAL--GIRTLLCDPPRAARG----D------------------E-G-DFRTLDELVQEADV 173 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECHHHHHTT----C------------------C-S-CBCCHHHHHHHCSE
T ss_pred CEEEEEeECHHHHHHHHHHHHC--CCEEEEECCChHHhc----c------------------C-c-ccCCHHHHHhhCCE
Confidence 5899999999999999999987 999999998543211 0 0 1 12467888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++++|..... ..-+..+. -+.....++++.++|+.|+.++-..+.+.+.|++.
T Consensus 174 V~l~~Plt~~g-------~~~T~~li--~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g 227 (381)
T 3oet_A 174 LTFHTPLYKDG-------PYKTLHLA--DETLIRRLKPGAILINACRGPVVDNAALLARLNAG 227 (381)
T ss_dssp EEECCCCCCSS-------TTCCTTSB--CHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred EEEcCcCCccc-------cccchhhc--CHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 99999853220 00011111 13455678999999999998877778888888764
No 149
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=98.50 E-value=5.5e-07 Score=88.97 Aligned_cols=118 Identities=17% Similarity=0.223 Sum_probs=73.0
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCC--eEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhh-cCCCEEEecCHHHhhcc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQC-RGKNLFFSTDVEKHVSE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~-~~~~l~~t~d~~~a~~~ 78 (480)
|||+|||+|.||.++|..|+.+ |. +|+++|+++++++.... .+....... ...+++.+++. +++++
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~--~~~~el~l~D~~~~k~~g~a~--------DL~~~~~~~~~~~~v~~~~~~-~a~~~ 69 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQ--DVAKEVVMVDIKDGMPQGKAL--------DMRESSPIHGFDTRVTGTNDY-GPTED 69 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCSSEEEEECSSTTHHHHHHH--------HHHHHHHHHTCCCEEEEESSS-GGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCchHHHHHHHH--------HHhccccccCCCcEEEECCCH-HHhCC
Confidence 8999999999999999999987 65 99999999987664321 011110000 11234445554 56999
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCC-----hHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHH
Q 011641 79 ADIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARVIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
||+||+|.+.|.... ..+.| ...+++..+.+.++. ++.++++ -|.|..+.-.
T Consensus 70 aDvVii~ag~~~kpG----~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~viv-vtNPvd~~t~ 126 (314)
T 3nep_X 70 SDVCIITAGLPRSPG----MSRDDLLAKNTEIVGGVTEQFVEGS-PDSTIIV-VANPLDVMTY 126 (314)
T ss_dssp CSEEEECCCC-----------CHHHHHHHHHHHHHHHHHHHTTC-TTCEEEE-CCSSHHHHHH
T ss_pred CCEEEECCCCCCCCC----CCHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEe-cCCchhHHHH
Confidence 999999999886441 11222 344556666777765 4555544 3567766444
No 150
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=98.49 E-value=1.9e-07 Score=94.48 Aligned_cols=108 Identities=19% Similarity=0.168 Sum_probs=77.8
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|||||+|.||..+|..+... |++|++||++++.. ..+ .. ..++++.++.||+
T Consensus 117 ~tvGIIGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~~---~~g--------------------~~-~~~l~ell~~aDv 170 (380)
T 2o4c_A 117 RTYGVVGAGQVGGRLVEVLRGL--GWKVLVCDPPRQAR---EPD--------------------GE-FVSLERLLAEADV 170 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECHHHHHH---STT--------------------SC-CCCHHHHHHHCSE
T ss_pred CEEEEEeCCHHHHHHHHHHHHC--CCEEEEEcCChhhh---ccC--------------------cc-cCCHHHHHHhCCE
Confidence 6899999999999999999987 99999999866432 111 01 2467788899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|..... ..-+..+. -+...+.++++.++|+.|+.++-..+.+.+.+++.
T Consensus 171 V~l~~Plt~~g-------~~~T~~li--~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g 224 (380)
T 2o4c_A 171 ISLHTPLNRDG-------EHPTRHLL--DEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGG 224 (380)
T ss_dssp EEECCCCCSSS-------SSCCTTSB--CHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred EEEeccCcccc-------ccchhhhc--CHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 99998854320 00011111 13456778999999999988777777888888764
No 151
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=98.49 E-value=1.5e-07 Score=93.86 Aligned_cols=105 Identities=13% Similarity=0.142 Sum_probs=77.5
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |++|++||++++.. + .. .... .++++.++.||+
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~--~-~~-------------------~~~~-~~l~ell~~aDv 201 (331)
T 1xdw_A 147 CTVGVVGLGRIGRVAAQIFHGM--GATVIGEDVFEIKG--I-ED-------------------YCTQ-VSLDEVLEKSDI 201 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCCS--C-TT-------------------TCEE-CCHHHHHHHCSE
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCEEEEECCCccHH--H-Hh-------------------cccc-CCHHHHHhhCCE
Confidence 5899999999999999999987 99999999975421 1 00 1222 377888899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|++|+|......+ ..+ +...+.++++.++|+.|+.++-..+.+.+.|++.
T Consensus 202 V~~~~p~t~~t~~-----li~--------~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g 251 (331)
T 1xdw_A 202 ITIHAPYIKENGA-----VVT--------RDFLKKMKDGAILVNCARGQLVDTEAVIEAVESG 251 (331)
T ss_dssp EEECCCCCTTTCC-----SBC--------HHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEecCCchHHHH-----HhC--------HHHHhhCCCCcEEEECCCcccccHHHHHHHHHhC
Confidence 9999985322111 111 3445678999999999988777777888888764
No 152
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=98.47 E-value=2.2e-06 Score=84.59 Aligned_cols=117 Identities=18% Similarity=0.279 Sum_probs=77.7
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcC---CCCCcCCChHHHHhhhcCCCEEEecCHHHhhcc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSD---QLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~---~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (480)
|||+|||+|++|.+++..|+.+....++.++|+++++++..... ..++. ..-+++. ++ .+++++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~-----------~~~~v~~-~~-~~a~~~ 67 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFA-----------HPVWVWA-GS-YGDLEG 67 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGS-----------CCCEEEE-CC-GGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhc-----------CCeEEEE-CC-HHHhCC
Confidence 79999999999999999999873336899999999887653321 01110 0112333 34 556999
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCC-----hHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHH
Q 011641 79 ADIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
||+||++.+.|... + ..+.| ...+++..+.+.++. ++.++++- |.|.++...+
T Consensus 68 aD~Vii~ag~~~~~-g---~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~-tNPv~~~t~~ 125 (310)
T 2xxj_A 68 ARAVVLAAGVAQRP-G---ETRLQLLDRNAQVFAQVVPRVLEAA-PEAVLLVA-TNPVDVMTQV 125 (310)
T ss_dssp EEEEEECCCCCCCT-T---CCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC-SSSHHHHHHH
T ss_pred CCEEEECCCCCCCC-C---cCHHHHHHhhHHHHHHHHHHHHHHC-CCcEEEEe-cCchHHHHHH
Confidence 99999999887643 1 11123 445666677777775 45555553 7888876543
No 153
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.45 E-value=2.3e-07 Score=77.10 Aligned_cols=73 Identities=21% Similarity=0.273 Sum_probs=53.5
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCC-CeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccC
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPS-IEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G-~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
+|+|+|+|+|.||..++..|.+. | ++|+++|+++++.+.+......... ..+.-..+..++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~--g~~~v~~~~r~~~~~~~~~~~~~~~~~------------~d~~~~~~~~~~~~~~ 70 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTS--SNYSVTVADHDLAALAVLNRMGVATKQ------------VDAKDEAGLAKALGGF 70 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC--SSEEEEEEESCHHHHHHHHTTTCEEEE------------CCTTCHHHHHHHTTTC
T ss_pred cCeEEEECCCHHHHHHHHHHHhC--CCceEEEEeCCHHHHHHHHhCCCcEEE------------ecCCCHHHHHHHHcCC
Confidence 47899999999999999999998 8 9999999999998887732211110 0010112344556789
Q ss_pred cEEEEecc
Q 011641 80 DIVFVSVN 87 (480)
Q Consensus 80 DvVii~Vp 87 (480)
|+||.|+|
T Consensus 71 d~vi~~~~ 78 (118)
T 3ic5_A 71 DAVISAAP 78 (118)
T ss_dssp SEEEECSC
T ss_pred CEEEECCC
Confidence 99999986
No 154
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=98.45 E-value=1e-06 Score=87.70 Aligned_cols=114 Identities=24% Similarity=0.333 Sum_probs=76.0
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCC--eEEEEECCHHHHHHHHc---CCCCCcCCChHHHHhhhcCCCEEEecCHHHhh
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVSRINAWNS---DQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV 76 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~---~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~ 76 (480)
|||+|||+|.+|.+++..|+.+ +. ++.++|+++++++.... ...++ ...++++.+..+++
T Consensus 10 ~KI~IiGaG~vG~~la~~l~~~--~~~~el~L~Di~~~~~~g~~~dl~~~~~~-------------~~~~~i~~~~~~a~ 74 (326)
T 2zqz_A 10 QKVILVGDGAVGSSYAYAMVLQ--GIAQEIGIVDIFKDKTKGDAIDLSNALPF-------------TSPKKIYSAEYSDA 74 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSCHHHHHHHHHHHHTTGGG-------------SCCCEEEECCGGGG
T ss_pred CEEEEECCCHHHHHHHHHHHcC--CCCCEEEEEeCCchHhHHHHHHHHHHHHh-------------cCCeEEEECCHHHh
Confidence 7999999999999999999987 54 89999999988765332 11111 02334444446679
Q ss_pred ccCcEEEEeccCCCCCCCCCCCCCCCh-----HHHHHHHHHHHhhCCCCcEEEEecCCCcchHHH
Q 011641 77 SEADIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARVIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 77 ~~aDvVii~Vptp~~~~~~~~~~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
++||+||++.+.|... | ..+.|+ ..+++..+.+.++. ++.+|++- |.|.++...
T Consensus 75 ~~aDvVii~ag~~~k~-g---~~R~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~-tNPv~~~t~ 133 (326)
T 2zqz_A 75 KDADLVVITAGAPQKP-G---ETRLDLVNKNLKILKSIVDPIVDSG-FNGIFLVA-ANPVDILTY 133 (326)
T ss_dssp GGCSEEEECCCCC---------CHHHHHHHHHHHHHHHHHHHHHHT-CCSEEEEC-SSSHHHHHH
T ss_pred CCCCEEEEcCCCCCCC-C---CCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEe-CCcHHHHHH
Confidence 9999999999887543 1 112233 45666777777775 45555553 788887544
No 155
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.43 E-value=7.8e-07 Score=84.28 Aligned_cols=96 Identities=13% Similarity=0.215 Sum_probs=67.4
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeE-EEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhh-ccC
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEV-AVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV-SEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~-~~a 79 (480)
|||+|||+|.||..++..|.+. |++| .+||+++ +. . . ..+|+++.+ .++
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~--g~~lv~v~d~~~-~~-----~-------------------~--~~~~~~~l~~~~~ 51 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERN--GFEIAAILDVRG-EH-----E-------------------K--MVRGIDEFLQREM 51 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEECSSC-CC-----T-------------------T--EESSHHHHTTSCC
T ss_pred CEEEEECCCHHHHHHHHHHhcC--CCEEEEEEecCc-ch-----h-------------------h--hcCCHHHHhcCCC
Confidence 7999999999999999999865 8997 6899863 11 0 1 456788877 689
Q ss_pred cEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchH---HHHHHHHHhc
Q 011641 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTA---EAIEKILTHN 144 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~---~~l~~~l~~~ 144 (480)
|+|++|+|... ..+.+...++.|..|+.+||...... +++.+..++.
T Consensus 52 DvVv~~~~~~~------------------~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~ 101 (236)
T 2dc1_A 52 DVAVEAASQQA------------------VKDYAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKT 101 (236)
T ss_dssp SEEEECSCHHH------------------HHHHHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHH
T ss_pred CEEEECCCHHH------------------HHHHHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhc
Confidence 99999987421 12223344567888888887654433 4565555544
No 156
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=98.43 E-value=2.1e-06 Score=85.38 Aligned_cols=115 Identities=17% Similarity=0.243 Sum_probs=77.8
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCC--eEEEEECCHHHHHHHHcC---CCCCcCCChHHHHhhhcCCCEEEecCHHHh
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVSRINAWNSD---QLPIYEPGLDGVVKQCRGKNLFFSTDVEKH 75 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~~---~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a 75 (480)
.|||+|||+|.||.++|..|+.+ |. +|.++|+++++++..... ..++. ....+..++|++ +
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~--~~~~el~L~Di~~~~~~g~a~DL~~~~~~~-----------~~~~i~~~~d~~-~ 84 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMK--DLADELALVDVIEDKLKGEMMDLQHGSLFL-----------KTPKIVSSKDYS-V 84 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHHHHHTGGGC-----------SCCEEEECSSGG-G
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCceEEEEeCChHHHHHHHHhhhhhhhcc-----------CCCeEEEcCCHH-H
Confidence 37999999999999999999987 65 899999999877763321 00110 012355677886 4
Q ss_pred hccCcEEEEeccCCCCCCCCCCCCCCCh-----HHHHHHHHHHHhhCCCCcEEEEecCCCcchHH
Q 011641 76 VSEADIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARVIADVSKSDKIVVEKSTVPVKTAE 135 (480)
Q Consensus 76 ~~~aDvVii~Vptp~~~~~~~~~~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~ 135 (480)
+++||+||+|...|.... ..+.|+ ..+++..+.|.++. ++.++++ -|.|..+.-
T Consensus 85 ~~~aDiVvi~aG~~~kpG----~tR~dL~~~N~~I~~~i~~~i~~~~-p~a~vlv-vtNPvdi~t 143 (331)
T 4aj2_A 85 TANSKLVIITAGARQQEG----ESRLNLVQRNVNIFKFIIPNVVKYS-PQCKLLI-VSNPVDILT 143 (331)
T ss_dssp GTTEEEEEECCSCCCCTT----CCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEE-CSSSHHHHH
T ss_pred hCCCCEEEEccCCCCCCC----ccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEE-ecChHHHHH
Confidence 999999999998875431 123343 44556667777774 4555544 356776543
No 157
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.42 E-value=2.3e-07 Score=80.83 Aligned_cols=70 Identities=13% Similarity=0.309 Sum_probs=57.3
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..++..|... |++|+++|+++++.+.+.+.. .......++..++++++|+
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~--g~~v~v~~r~~~~~~~~a~~~----------------~~~~~~~~~~~~~~~~~Di 83 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYP--QYKVTVAGRNIDHVRAFAEKY----------------EYEYVLINDIDSLIKNNDV 83 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTT--TCEEEEEESCHHHHHHHHHHH----------------TCEEEECSCHHHHHHTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCEEEEEcCCHHHHHHHHHHh----------------CCceEeecCHHHHhcCCCE
Confidence 6899999999999999999887 889999999999988765420 0123456778888899999
Q ss_pred EEEeccCC
Q 011641 82 VFVSVNTP 89 (480)
Q Consensus 82 Vii~Vptp 89 (480)
||.|+|.+
T Consensus 84 vi~at~~~ 91 (144)
T 3oj0_A 84 IITATSSK 91 (144)
T ss_dssp EEECSCCS
T ss_pred EEEeCCCC
Confidence 99998865
No 158
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=98.42 E-value=1.1e-06 Score=91.56 Aligned_cols=81 Identities=15% Similarity=0.194 Sum_probs=59.4
Q ss_pred cEEEEECCChh-HHHHHHHHHHc--C-CCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhh-hcCCCEEEecCHHHhh
Q 011641 2 VKICCIGAGYV-GGPTMAVIALK--C-PSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFSTDVEKHV 76 (480)
Q Consensus 2 mkI~VIGlG~~-G~~lA~~La~~--~-~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~ 76 (480)
|||+|||+|.+ |.++|..|+.+ . ++++|.+||+++++++.++.-. +.++.. ....++++++|+++++
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~--------~~~l~~~~~~~~I~~t~D~~eal 100 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGAC--------DVFIREKAPDIEFAATTDPEEAF 100 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHH--------HHHHHHHCTTSEEEEESCHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHH--------HHHhccCCCCCEEEEECCHHHHH
Confidence 39999999999 66678777765 2 2679999999999988765310 111111 1134688889998889
Q ss_pred ccCcEEEEeccCCC
Q 011641 77 SEADIVFVSVNTPT 90 (480)
Q Consensus 77 ~~aDvVii~Vptp~ 90 (480)
++||+||+++|++.
T Consensus 101 ~~AD~VViaag~~~ 114 (472)
T 1u8x_X 101 TDVDFVMAHIRVGK 114 (472)
T ss_dssp SSCSEEEECCCTTH
T ss_pred cCCCEEEEcCCCcc
Confidence 99999999998753
No 159
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.41 E-value=8e-07 Score=86.27 Aligned_cols=93 Identities=14% Similarity=0.190 Sum_probs=69.9
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||.++|..|++. |++|+++|+++++.+.+.+.. ++.+.+++.++++++|+
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~--g~~V~v~~r~~~~~~~l~~~~------------------g~~~~~~~~~~~~~aDi 189 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKE--GAKVFLWNRTKEKAIKLAQKF------------------PLEVVNSPEEVIDKVQV 189 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSHHHHHHHTTTS------------------CEEECSCGGGTGGGCSE
T ss_pred CEEEEECchHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHc------------------CCeeehhHHhhhcCCCE
Confidence 6899999999999999999998 889999999999988876421 24455577777889999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecC
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST 128 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST 128 (480)
||.|+|.+...+ ... .+ . .+.++++++|++.++
T Consensus 190 Vi~atp~~~~~~------~~~--~i----~--~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 190 IVNTTSVGLKDE------DPE--IF----N--YDLIKKDHVVVDIIY 222 (275)
T ss_dssp EEECSSTTSSTT------CCC--SS----C--GGGCCTTSEEEESSS
T ss_pred EEEeCCCCCCCC------CCC--CC----C--HHHcCCCCEEEEcCC
Confidence 999998654210 000 01 0 245778999988776
No 160
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.40 E-value=2.3e-06 Score=84.89 Aligned_cols=71 Identities=15% Similarity=0.280 Sum_probs=56.5
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhh-cc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV-SE 78 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~-~~ 78 (480)
||||+|||+|.||..++..|.+. ++++++ ++|+++++.+.+.+.. +.....+|+++.+ .+
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~-~~~~~~~v~d~~~~~~~~~~~~~-----------------~~~~~~~~~~~~l~~~ 62 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTS-GEYQLVAIYSRKLETAATFASRY-----------------QNIQLFDQLEVFFKSS 62 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TSEEEEEEECSSHHHHHHHGGGS-----------------SSCEEESCHHHHHTSS
T ss_pred CeEEEEEeCCHHHHHHHHHHHhC-CCeEEEEEEeCCHHHHHHHHHHc-----------------CCCeEeCCHHHHhCCC
Confidence 78999999999999999999875 467764 8999999887766421 1235678888877 78
Q ss_pred CcEEEEeccCC
Q 011641 79 ADIVFVSVNTP 89 (480)
Q Consensus 79 aDvVii~Vptp 89 (480)
+|+|++|+|+.
T Consensus 63 ~D~V~i~tp~~ 73 (325)
T 2ho3_A 63 FDLVYIASPNS 73 (325)
T ss_dssp CSEEEECSCGG
T ss_pred CCEEEEeCChH
Confidence 99999998853
No 161
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=98.39 E-value=1.8e-06 Score=85.66 Aligned_cols=116 Identities=22% Similarity=0.288 Sum_probs=73.0
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCC--eEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccC
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
|||+|||+|.||.++|..|+.+ |. ++.++|+++++++.......+.. + .. ...+++++..+++++|
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~--~~~~el~l~D~~~~k~~g~a~DL~~~~-~--------~~-~~~~i~~~~~~a~~~a 77 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQ--GIAQEIGIVDIFKDKTKGDAIDLEDAL-P--------FT-SPKKIYSAEYSDAKDA 77 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSCHHHHHHHHHHHHTTG-G--------GS-CCCEEEECCGGGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEeCChHHHHHHHhhHhhhh-h--------hc-CCcEEEECcHHHhcCC
Confidence 7999999999999999999987 65 89999999998775432100000 0 00 1344444445569999
Q ss_pred cEEEEeccCCCCCCCCCCCCCCC-----hHHHHHHHHHHHhhCCCCcEEEEecCCCcchHH
Q 011641 80 DIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARVIADVSKSDKIVVEKSTVPVKTAE 135 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~ 135 (480)
|+||++.+.|..... .+.| ...+++..+.+.++.+ +.++++- |.|..+..
T Consensus 78 DiVvi~ag~~~kpG~----tR~dL~~~N~~I~~~i~~~i~~~~p-~a~ilvv-tNPvdi~t 132 (326)
T 3vku_A 78 DLVVITAGAPQKPGE----TRLDLVNKNLKILKSIVDPIVDSGF-NGIFLVA-ANPVDILT 132 (326)
T ss_dssp SEEEECCCCC--------------------CHHHHHHHHHTTTC-CSEEEEC-SSSHHHHH
T ss_pred CEEEECCCCCCCCCc----hHHHHHHHHHHHHHHHHHHHHhcCC-ceEEEEc-cCchHHHH
Confidence 999999988754311 1222 3445677777777665 5555443 56776543
No 162
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=98.39 E-value=2.4e-06 Score=84.26 Aligned_cols=119 Identities=21% Similarity=0.240 Sum_probs=79.2
Q ss_pred EEEEECCChhHHHHHHHHHHcCCCC-eEEEEECCHHHHHHHHcCCCCCcCCChHHHHh-hhcCCCEEEecCHHHhhccCc
Q 011641 3 KICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVK-QCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 3 kI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~-~~~~~~l~~t~d~~~a~~~aD 80 (480)
||+|||+|.||.++|..++.+ |+ +|.++|+++++++..... +.+... .....+++.++|+ +++++||
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~--~l~el~L~Di~~~~~~g~~~d--------l~~~~~~~~~~~~i~~t~d~-~a~~~aD 69 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR--GYDDLLLIARTPGKPQGEALD--------LAHAAAELGVDIRISGSNSY-EDMRGSD 69 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH--TCSCEEEECSSTTHHHHHHHH--------HHHHHHHHTCCCCEEEESCG-GGGTTCS
T ss_pred CEEEECcCHHHHHHHHHHHhC--CCCEEEEEcCChhhHHHHHHH--------HHHhhhhcCCCeEEEECCCH-HHhCCCC
Confidence 799999999999999999987 66 799999998877653221 111100 0012357777887 5699999
Q ss_pred EEEEeccCCCCCCCCCCCC----CCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHH
Q 011641 81 IVFVSVNTPTKTQGLGAGK----AADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~----~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
+||++.+.|.... .++ .-+...+++.++.+.++. ++.++++- |.|.+....+
T Consensus 70 ~Vi~~ag~~~k~G---~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~-tNPv~~~t~~ 125 (308)
T 2d4a_B 70 IVLVTAGIGRKPG---MTREQLLEANANTMADLAEKIKAYA-KDAIVVIT-TNPVDAMTYV 125 (308)
T ss_dssp EEEECCSCCCCSS---CCTHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC-CSSHHHHHHH
T ss_pred EEEEeCCCCCCCC---CcHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEe-CCchHHHHHH
Confidence 9999998876431 010 112334566777777776 56655553 6787765443
No 163
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.39 E-value=1.5e-06 Score=86.94 Aligned_cols=70 Identities=19% Similarity=0.276 Sum_probs=57.3
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc--
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS-- 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (480)
|+||+|||+|.||..++..|.+. ++++|+ ++|+++++.+.+.+.. +....+|+++.++
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~-~~~~l~av~d~~~~~~~~~a~~~------------------g~~~~~~~~~~l~~~ 64 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAAN-PDLELVVIADPFIEGAQRLAEAN------------------GAEAVASPDEVFARD 64 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC-TTEEEEEEECSSHHHHHHHHHTT------------------TCEEESSHHHHTTCS
T ss_pred ceEEEEECCcHHHHHHHHHHHhC-CCcEEEEEECCCHHHHHHHHHHc------------------CCceeCCHHHHhcCC
Confidence 36899999999999999999875 578876 7999999988776521 2466789999887
Q ss_pred cCcEEEEeccCC
Q 011641 78 EADIVFVSVNTP 89 (480)
Q Consensus 78 ~aDvVii~Vptp 89 (480)
++|+|++|+|+.
T Consensus 65 ~~D~V~i~tp~~ 76 (344)
T 3euw_A 65 DIDGIVIGSPTS 76 (344)
T ss_dssp CCCEEEECSCGG
T ss_pred CCCEEEEeCCch
Confidence 899999998754
No 164
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.38 E-value=1.5e-06 Score=86.47 Aligned_cols=69 Identities=16% Similarity=0.192 Sum_probs=55.8
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc--
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS-- 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (480)
|+||+|||+|.||..++..|.+. ++++|+ ++|+++++.+.+.+. .++. .+|+++.++
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~-~~~~l~av~d~~~~~~~~~~~~------------------~~~~-~~~~~~~l~~~ 62 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGN-ADARLVAVADAFPAAAEAIAGA------------------YGCE-VRTIDAIEAAA 62 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC-TTEEEEEEECSSHHHHHHHHHH------------------TTCE-ECCHHHHHHCT
T ss_pred ceEEEEECCCHHHHHHHHHHhhC-CCcEEEEEECCCHHHHHHHHHH------------------hCCC-cCCHHHHhcCC
Confidence 46999999999999999999875 578877 699999998877642 1234 678888777
Q ss_pred cCcEEEEeccCC
Q 011641 78 EADIVFVSVNTP 89 (480)
Q Consensus 78 ~aDvVii~Vptp 89 (480)
++|+|++|+|+.
T Consensus 63 ~~D~V~i~tp~~ 74 (331)
T 4hkt_A 63 DIDAVVICTPTD 74 (331)
T ss_dssp TCCEEEECSCGG
T ss_pred CCCEEEEeCCch
Confidence 799999998754
No 165
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=98.38 E-value=2.1e-06 Score=84.31 Aligned_cols=95 Identities=15% Similarity=0.237 Sum_probs=70.3
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |.+|++||+++++.+.+.+.. ....-..++++.++++|+
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~--G~~V~~~d~~~~~~~~~~~~g-----------------~~~~~~~~l~~~l~~aDv 218 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAAL--GANVKVGARSSAHLARITEMG-----------------LVPFHTDELKEHVKDIDI 218 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTT-----------------CEEEEGGGHHHHSTTCSE
T ss_pred CEEEEEcccHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHCC-----------------CeEEchhhHHHHhhCCCE
Confidence 5899999999999999999987 899999999998776654310 011112466777899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcch
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKT 133 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
|++|+|... .+ +.....++++.++|+.+..+.++
T Consensus 219 Vi~~~p~~~----------i~--------~~~~~~mk~g~~lin~a~g~~~~ 252 (300)
T 2rir_A 219 CINTIPSMI----------LN--------QTVLSSMTPKTLILDLASRPGGT 252 (300)
T ss_dssp EEECCSSCC----------BC--------HHHHTTSCTTCEEEECSSTTCSB
T ss_pred EEECCChhh----------hC--------HHHHHhCCCCCEEEEEeCCCCCc
Confidence 999988532 11 12346688899999988766555
No 166
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=98.37 E-value=2.6e-06 Score=83.78 Aligned_cols=111 Identities=17% Similarity=0.281 Sum_probs=70.8
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCC--eEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhcc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE 78 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~--~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (480)
|+||+|||+|.||..+|..++.+ |+ +|.++|++++ ..... .++.. ....+++.++|+ +++++
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~--g~~~ev~L~Di~~~-~~g~a-----------~dl~~-~~~~~i~~t~d~-~~l~~ 77 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAK--GIADRLVLLDLSEG-TKGAT-----------MDLEI-FNLPNVEISKDL-SASAH 77 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECCC------CH-----------HHHHH-HTCTTEEEESCG-GGGTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhc--CCCCEEEEEcCCcc-hHHHH-----------HHHhh-hcCCCeEEeCCH-HHHCC
Confidence 57999999999999999999988 77 9999999985 21100 01111 112367888898 56999
Q ss_pred CcEEEEeccCCCCCCCCCCCC----CCChHHHHHHHHHHHhhCCCCcEEEEecCCCcch
Q 011641 79 ADIVFVSVNTPTKTQGLGAGK----AADLTYWESAARVIADVSKSDKIVVEKSTVPVKT 133 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~----~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
||+||+++..+ .. | .++ .-+...+.++++.+.++. ++.++++ -|.|...
T Consensus 78 aD~Vi~aag~~-~p-G--~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv-~sNP~~~ 130 (303)
T 2i6t_A 78 SKVVIFTVNSL-GS-S--QSYLDVVQSNVDMFRALVPALGHYS-QHSVLLV-ASQPVEI 130 (303)
T ss_dssp CSEEEECCCC--------CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEE-CSSSHHH
T ss_pred CCEEEEcCCCC-CC-C--CCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEE-cCChHHH
Confidence 99999998654 11 1 000 112334566777788776 5666655 3556554
No 167
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.36 E-value=8.1e-07 Score=87.49 Aligned_cols=69 Identities=16% Similarity=0.256 Sum_probs=54.4
Q ss_pred cEEEEECCChhHHH-HHHHHHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccC
Q 011641 2 VKICCIGAGYVGGP-TMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
+||+|||+|.||.. ++..|.+. ++++++ ++|+++++.+.+.+.. ++...+|+++.++++
T Consensus 7 ~~igiIG~G~~g~~~~~~~l~~~-~~~~l~av~d~~~~~~~~~a~~~------------------~~~~~~~~~~ll~~~ 67 (308)
T 3uuw_A 7 IKMGMIGLGSIAQKAYLPILTKS-ERFEFVGAFTPNKVKREKICSDY------------------RIMPFDSIESLAKKC 67 (308)
T ss_dssp CEEEEECCSHHHHHHTHHHHTSC-SSSEEEEEECSCHHHHHHHHHHH------------------TCCBCSCHHHHHTTC
T ss_pred CcEEEEecCHHHHHHHHHHHHhC-CCeEEEEEECCCHHHHHHHHHHc------------------CCCCcCCHHHHHhcC
Confidence 68999999999996 88888764 478877 7999999988776420 112267888888899
Q ss_pred cEEEEeccCC
Q 011641 80 DIVFVSVNTP 89 (480)
Q Consensus 80 DvVii~Vptp 89 (480)
|+|++|+|+.
T Consensus 68 D~V~i~tp~~ 77 (308)
T 3uuw_A 68 DCIFLHSSTE 77 (308)
T ss_dssp SEEEECCCGG
T ss_pred CEEEEeCCcH
Confidence 9999998854
No 168
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=98.35 E-value=2.8e-06 Score=83.14 Aligned_cols=93 Identities=13% Similarity=0.143 Sum_probs=69.0
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEE--ecCHHHhhccC
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFF--STDVEKHVSEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~--t~d~~~a~~~a 79 (480)
++|+|||+|.||..+|..+... |.+|+++|+++++.+.+.+. + .+. ..++++.++++
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~------------------g-~~~~~~~~l~~~l~~a 214 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAAL--GAKVKVGARESDLLARIAEM------------------G-MEPFHISKAAQELRDV 214 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHT------------------T-SEEEEGGGHHHHTTTC
T ss_pred CEEEEEeeCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHC------------------C-CeecChhhHHHHhcCC
Confidence 5899999999999999999987 89999999999876655431 1 111 24567778999
Q ss_pred cEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcch
Q 011641 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKT 133 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
|+|++|+|... .+ . .....++++.++|+.+..+.++
T Consensus 215 DvVi~~~p~~~----------i~----~----~~l~~mk~~~~lin~ar~~~~~ 250 (293)
T 3d4o_A 215 DVCINTIPALV----------VT----A----NVLAEMPSHTFVIDLASKPGGT 250 (293)
T ss_dssp SEEEECCSSCC----------BC----H----HHHHHSCTTCEEEECSSTTCSB
T ss_pred CEEEECCChHH----------hC----H----HHHHhcCCCCEEEEecCCCCCC
Confidence 99999987432 11 1 1234578899999988766555
No 169
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.34 E-value=1.5e-06 Score=87.00 Aligned_cols=71 Identities=17% Similarity=0.207 Sum_probs=56.0
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc--
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS-- 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (480)
||||+|||+|.||..++..|.+. ++++++ ++|+++++.+.+.+.. +..+..+|+++.++
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~-~~~~l~av~d~~~~~~~~~~~~~-----------------~~~~~~~~~~~ll~~~ 63 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMI-DDAILYAISDVREDRLREMKEKL-----------------GVEKAYKDPHELIEDP 63 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGS-TTEEEEEEECSCHHHHHHHHHHH-----------------TCSEEESSHHHHHHCT
T ss_pred eeEEEEEcCCHHHHHHHHHHHhC-CCcEEEEEECCCHHHHHHHHHHh-----------------CCCceeCCHHHHhcCC
Confidence 46999999999999999999874 578876 6899999988765420 11246788888777
Q ss_pred cCcEEEEeccCC
Q 011641 78 EADIVFVSVNTP 89 (480)
Q Consensus 78 ~aDvVii~Vptp 89 (480)
++|+|++|+|+.
T Consensus 64 ~~D~V~i~tp~~ 75 (344)
T 3ezy_A 64 NVDAVLVCSSTN 75 (344)
T ss_dssp TCCEEEECSCGG
T ss_pred CCCEEEEcCCCc
Confidence 799999998753
No 170
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.33 E-value=9.9e-07 Score=76.52 Aligned_cols=98 Identities=19% Similarity=0.226 Sum_probs=69.0
Q ss_pred cEEEEECC----ChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc
Q 011641 2 VKICCIGA----GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS 77 (480)
Q Consensus 2 mkI~VIGl----G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (480)
.+|+|||+ |.||..++.+|.+. |++|+.++.+.+.+ .++++..+++++.+
T Consensus 15 ~~IavIGaS~~~g~~G~~~~~~L~~~--G~~V~~vnp~~~~i------------------------~G~~~~~s~~el~~ 68 (138)
T 1y81_A 15 RKIALVGASKNPAKYGNIILKDLLSK--GFEVLPVNPNYDEI------------------------EGLKCYRSVRELPK 68 (138)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEECTTCSEE------------------------TTEECBSSGGGSCT
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHC--CCEEEEeCCCCCeE------------------------CCeeecCCHHHhCC
Confidence 57999999 99999999999998 99866655532111 13566778888667
Q ss_pred cCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcC
Q 011641 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNS 145 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~ 145 (480)
.+|++++|+|. ..+.++++++.+ ...+.+++..||. .+++.+..++.+
T Consensus 69 ~vDlvii~vp~---------------~~v~~v~~~~~~-~g~~~i~~~~~~~----~~~l~~~a~~~G 116 (138)
T 1y81_A 69 DVDVIVFVVPP---------------KVGLQVAKEAVE-AGFKKLWFQPGAE----SEEIRRFLEKAG 116 (138)
T ss_dssp TCCEEEECSCH---------------HHHHHHHHHHHH-TTCCEEEECTTSC----CHHHHHHHHHHT
T ss_pred CCCEEEEEeCH---------------HHHHHHHHHHHH-cCCCEEEEcCccH----HHHHHHHHHHCC
Confidence 89999999983 235666776665 4456677765553 466666666543
No 171
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=98.32 E-value=4.9e-06 Score=81.27 Aligned_cols=120 Identities=19% Similarity=0.209 Sum_probs=76.0
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhh-cCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQC-RGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~-~~~~l~~t~d~~~a~~~aD 80 (480)
|||+|||+|.+|.++|..|+.+..-.++.++|+++++.+..... +....... ...++..++|+++ +++||
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~D--------L~h~~~~~~~~~~i~~~~d~~~-~~~aD 71 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMD--------LAHAAAGIDKYPKIVGGADYSL-LKGSE 71 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHH--------HHHHHGGGTCCCEEEEESCGGG-GTTCS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhh--------hhcccccCCCCCeEecCCCHHH-hCCCC
Confidence 89999999999999999988762224899999998765532210 11100000 1123566778764 99999
Q ss_pred EEEEeccCCCCCCCCCCCCCCC-----hHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHH
Q 011641 81 IVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARVIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
+|+++-..|..+.. .+.| .+.+++..++|.++.+ +.++++ -|.|..+.-.
T Consensus 72 vVvitAG~prkpGm----tR~dLl~~Na~I~~~i~~~i~~~~p-~aivlv-vsNPvd~~t~ 126 (294)
T 2x0j_A 72 IIVVTAGLARKPGM----TRLDLAHKNAGIIKDIAKKIVENAP-ESKILV-VTNPMDVMTY 126 (294)
T ss_dssp EEEECCCCCCCSSS----CHHHHHHHHHHHHHHHHHHHHTTST-TCEEEE-CSSSHHHHHH
T ss_pred EEEEecCCCCCCCC----chHHHHHHHHHHHHHHHHHHHhcCC-ceEEEE-ecCcchhhHH
Confidence 99999887765421 1222 3444556667777765 444433 3677766433
No 172
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.32 E-value=2e-06 Score=86.43 Aligned_cols=71 Identities=15% Similarity=0.267 Sum_probs=56.8
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc--
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS-- 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (480)
++||+|||+|.||..++..|.+..++++++ ++|+++++.+.+.+. .++...+|+++.++
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~------------------~~~~~~~~~~~ll~~~ 74 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVER------------------TGARGHASLTDMLAQT 74 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHH------------------HCCEEESCHHHHHHHC
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHH------------------cCCceeCCHHHHhcCC
Confidence 368999999999999999998753477865 889999998876642 12467789998776
Q ss_pred cCcEEEEeccCC
Q 011641 78 EADIVFVSVNTP 89 (480)
Q Consensus 78 ~aDvVii~Vptp 89 (480)
++|+|++|+|+.
T Consensus 75 ~~D~V~i~tp~~ 86 (354)
T 3q2i_A 75 DADIVILTTPSG 86 (354)
T ss_dssp CCSEEEECSCGG
T ss_pred CCCEEEECCCcH
Confidence 799999998854
No 173
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=98.31 E-value=4.8e-06 Score=82.92 Aligned_cols=116 Identities=16% Similarity=0.227 Sum_probs=78.5
Q ss_pred cEEEEECC-ChhHHHHHHHHHHcCCCC-------eEEEEECC----HHHHHH----HHcCCCCCcCCChHHHHhhhcCCC
Q 011641 2 VKICCIGA-GYVGGPTMAVIALKCPSI-------EVAVVDIS----VSRINA----WNSDQLPIYEPGLDGVVKQCRGKN 65 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~-------~V~~~D~~----~~~v~~----l~~~~~~~~e~~l~~~~~~~~~~~ 65 (480)
|||+|+|+ |.+|.+++..|+.+ |+ +|.++|++ +++.+. +.....++ .+.
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~--~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-------------~~~ 70 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANG--DMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-------------LAG 70 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTT--TTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-------------EEE
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-------------cCc
Confidence 79999997 99999999999987 64 89999999 655543 33321111 124
Q ss_pred EEEecCHHHhhccCcEEEEeccCCCCCCCCCCCCC-----CChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHH
Q 011641 66 LFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKA-----ADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 66 l~~t~d~~~a~~~aDvVii~Vptp~~~~~~~~~~~-----~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
++.+++..+++++||+||++...|.... ... .+...+++.++.+.++..++.++++.| .|.++...+
T Consensus 71 i~~~~~~~~al~~aD~Vi~~ag~~~~~g----~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~S-NPv~~~t~~ 142 (329)
T 1b8p_A 71 MTAHADPMTAFKDADVALLVGARPRGPG----MERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVG-NPANTNAYI 142 (329)
T ss_dssp EEEESSHHHHTTTCSEEEECCCCCCCTT----CCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS-SSHHHHHHH
T ss_pred EEEecCcHHHhCCCCEEEEeCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcc-CchHHHHHH
Confidence 6778898888999999999988765321 011 122345566677777754555665544 777765443
No 174
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.31 E-value=4.3e-06 Score=73.59 Aligned_cols=40 Identities=23% Similarity=0.248 Sum_probs=36.9
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHH
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWN 43 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~ 43 (480)
++|.|+|+|.+|..+|..|.+. |++|+++|+++++++.++
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~--g~~V~vid~~~~~~~~~~ 59 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSS--GHSVVVVDKNEYAFHRLN 59 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCGGGGGGSC
T ss_pred CcEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHH
Confidence 6899999999999999999998 899999999999887665
No 175
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.26 E-value=2e-06 Score=86.35 Aligned_cols=70 Identities=11% Similarity=0.168 Sum_probs=54.5
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhh--cc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV--SE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~--~~ 78 (480)
+||+|||+|.||..++..|.+. ++++|+ ++|+++++.+.+.+.. ++...+|+++.+ .+
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~-~~~~lvav~d~~~~~~~~~~~~~------------------g~~~~~~~~~~l~~~~ 66 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKS-EKLKLVTCYSRTEDKREKFGKRY------------------NCAGDATMEALLARED 66 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTC-SSEEEEEEECSSHHHHHHHHHHH------------------TCCCCSSHHHHHHCSS
T ss_pred ceEEEEccCHHHHHHHHHHHhC-CCcEEEEEECCCHHHHHHHHHHc------------------CCCCcCCHHHHhcCCC
Confidence 5899999999999999999875 578865 7899999988765420 123357888877 56
Q ss_pred CcEEEEeccCCC
Q 011641 79 ADIVFVSVNTPT 90 (480)
Q Consensus 79 aDvVii~Vptp~ 90 (480)
+|+|++|+|+..
T Consensus 67 ~D~V~i~tp~~~ 78 (354)
T 3db2_A 67 VEMVIITVPNDK 78 (354)
T ss_dssp CCEEEECSCTTS
T ss_pred CCEEEEeCChHH
Confidence 999999988653
No 176
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.26 E-value=3.6e-06 Score=84.18 Aligned_cols=71 Identities=21% Similarity=0.315 Sum_probs=56.0
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCC-CEEEecCHHHhhcc-
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGK-NLFFSTDVEKHVSE- 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~-~l~~t~d~~~a~~~- 78 (480)
+||+|||+|.||..++..|.++.++++++ ++|+++++.+.+.+.. + .....+|+++.+++
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~-----------------g~~~~~~~~~~~ll~~~ 65 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQY-----------------QLNATVYPNDDSLLADE 65 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHT-----------------TCCCEEESSHHHHHHCT
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHh-----------------CCCCeeeCCHHHHhcCC
Confidence 69999999999999999998333578866 7899999988776421 1 14667899988765
Q ss_pred -CcEEEEeccCC
Q 011641 79 -ADIVFVSVNTP 89 (480)
Q Consensus 79 -aDvVii~Vptp 89 (480)
+|+|++|+|+.
T Consensus 66 ~~D~V~i~tp~~ 77 (344)
T 3mz0_A 66 NVDAVLVTSWGP 77 (344)
T ss_dssp TCCEEEECSCGG
T ss_pred CCCEEEECCCch
Confidence 89999998754
No 177
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.26 E-value=4.2e-06 Score=72.26 Aligned_cols=43 Identities=19% Similarity=0.196 Sum_probs=39.4
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcC
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSD 45 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~ 45 (480)
|++|.|+|+|.+|..+|..|.++ |++|+++|+++++++.+.+.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~--g~~V~~id~~~~~~~~~~~~ 48 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAA--GKKVLAVDKSKEKIELLEDE 48 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHC
Confidence 35799999999999999999998 99999999999999988753
No 178
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=98.26 E-value=3.3e-06 Score=87.22 Aligned_cols=76 Identities=21% Similarity=0.205 Sum_probs=57.4
Q ss_pred cEEEEECCChh--HHHHHHHHHHcC--CCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc
Q 011641 2 VKICCIGAGYV--GGPTMAVIALKC--PSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS 77 (480)
Q Consensus 2 mkI~VIGlG~~--G~~lA~~La~~~--~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (480)
|||+|||+|.| |..++..|+... .| +|++||+++++++.++.-...+.. ...++++|+|++++++
T Consensus 6 ~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~----------~~~~I~~TtD~~eAl~ 74 (450)
T 3fef_A 6 IKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGN----------GRWRYEAVSTLKKALS 74 (450)
T ss_dssp EEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTT----------SCEEEEEESSHHHHHT
T ss_pred CEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhc----------cCCeEEEECCHHHHhc
Confidence 59999999996 688998888621 26 999999999887765431111111 1236889999999999
Q ss_pred cCcEEEEeccC
Q 011641 78 EADIVFVSVNT 88 (480)
Q Consensus 78 ~aDvVii~Vpt 88 (480)
+||+||++++.
T Consensus 75 dADfVI~airv 85 (450)
T 3fef_A 75 AADIVIISILP 85 (450)
T ss_dssp TCSEEEECCCS
T ss_pred CCCEEEecccc
Confidence 99999999973
No 179
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.25 E-value=1.7e-06 Score=83.37 Aligned_cols=103 Identities=18% Similarity=0.151 Sum_probs=71.9
Q ss_pred EEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcEE
Q 011641 3 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADIV 82 (480)
Q Consensus 3 kI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDvV 82 (480)
+|+|||+|.||.++|..|.+. |++|+++|+++++.+.+.+.. + .. .++++++ +++|+|
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~--g~~v~v~~r~~~~~~~l~~~~-----------------~-~~-~~~~~~~-~~~Div 175 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREA--GLEVWVWNRTPQRALALAEEF-----------------G-LR-AVPLEKA-REARLL 175 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHH-----------------T-CE-ECCGGGG-GGCSEE
T ss_pred eEEEECCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHh-----------------c-cc-hhhHhhc-cCCCEE
Confidence 699999999999999999988 889999999998887765310 1 12 3466776 899999
Q ss_pred EEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHh
Q 011641 83 FVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTH 143 (480)
Q Consensus 83 ii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~ 143 (480)
|+|+|.+... +.. ..+. .+.++++++|++.++.+..+ + +.+..++
T Consensus 176 i~~tp~~~~~---------~~~---~~l~--~~~l~~g~~viD~~~~p~~t-~-l~~~a~~ 220 (263)
T 2d5c_A 176 VNATRVGLED---------PSA---SPLP--AELFPEEGAAVDLVYRPLWT-R-FLREAKA 220 (263)
T ss_dssp EECSSTTTTC---------TTC---CSSC--GGGSCSSSEEEESCCSSSSC-H-HHHHHHH
T ss_pred EEccCCCCCC---------CCC---CCCC--HHHcCCCCEEEEeecCCccc-H-HHHHHHH
Confidence 9999865321 000 0011 34577889998887765544 3 4444444
No 180
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.24 E-value=4.4e-06 Score=83.86 Aligned_cols=103 Identities=12% Similarity=0.014 Sum_probs=74.4
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..++..|....+..+|++||+++++.+++.+.... .++ -.+...++++++++++|+
T Consensus 130 ~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~--~~g----------~~~~~~~~~~eav~~aDi 197 (350)
T 1x7d_A 130 RKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKE--YSG----------LTIRRASSVAEAVKGVDI 197 (350)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTT--CTT----------CEEEECSSHHHHHTTCSE
T ss_pred CeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHh--ccC----------ceEEEeCCHHHHHhcCCE
Confidence 58999999999999998886532357999999999999887642100 000 124567888898999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcch
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKT 133 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
|++|+|++... +- +. ...+++++.|+..+|..|+.
T Consensus 198 Vi~aTps~~~~--------pv-------l~--~~~l~~G~~V~~vgs~~p~~ 232 (350)
T 1x7d_A 198 ITTVTADKAYA--------TI-------IT--PDMLEPGMHLNAVGGDCPGK 232 (350)
T ss_dssp EEECCCCSSEE--------EE-------EC--GGGCCTTCEEEECSCCBTTB
T ss_pred EEEeccCCCCC--------ce-------ec--HHHcCCCCEEEECCCCCCCc
Confidence 99998864211 00 00 24678899999989887774
No 181
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=98.23 E-value=6e-06 Score=82.47 Aligned_cols=71 Identities=14% Similarity=0.236 Sum_probs=54.3
Q ss_pred CcEEEEECCChhHHHHHHHHH-HcCCCCeE-EEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc-
Q 011641 1 MVKICCIGAGYVGGPTMAVIA-LKCPSIEV-AVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS- 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La-~~~~G~~V-~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~- 77 (480)
++||+|||+|.||..++..|. +. +++++ .++|+++++.+.+.+.. +...+.+|+++.++
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~-~~~~~vav~d~~~~~~~~~a~~~-----------------g~~~~~~~~~~~l~~ 69 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKI-QGVKLVAACALDSNQLEWAKNEL-----------------GVETTYTNYKDMIDT 69 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTC-SSEEEEEEECSCHHHHHHHHHTT-----------------CCSEEESCHHHHHTT
T ss_pred cceEEEEcCCHHHHHHHHHHHhcC-CCcEEEEEecCCHHHHHHHHHHh-----------------CCCcccCCHHHHhcC
Confidence 378999999999999999988 43 47775 57899999987765421 11145678888775
Q ss_pred -cCcEEEEeccCC
Q 011641 78 -EADIVFVSVNTP 89 (480)
Q Consensus 78 -~aDvVii~Vptp 89 (480)
++|+|++|+|+.
T Consensus 70 ~~~D~V~i~tp~~ 82 (346)
T 3cea_A 70 ENIDAIFIVAPTP 82 (346)
T ss_dssp SCCSEEEECSCGG
T ss_pred CCCCEEEEeCChH
Confidence 699999998753
No 182
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=98.22 E-value=3.6e-06 Score=87.18 Aligned_cols=81 Identities=19% Similarity=0.211 Sum_probs=59.1
Q ss_pred cEEEEECCChh-HHHHHHHHHH--cC-CCCeEEEEECCH--HHHHHHHcCCCCCcCCChHHHHhh-hcCCCEEEecCHHH
Q 011641 2 VKICCIGAGYV-GGPTMAVIAL--KC-PSIEVAVVDISV--SRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFSTDVEK 74 (480)
Q Consensus 2 mkI~VIGlG~~-G~~lA~~La~--~~-~G~~V~~~D~~~--~~v~~l~~~~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~ 74 (480)
|||+|||+|.+ |.+++..|+. .. ++++|.+||+++ ++++.++.-. +.++.. ....+++.++|+.+
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~--------~~~~~~~~~~~~i~~t~D~~e 79 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALA--------KRMVEKAGVPIEIHLTLDRRR 79 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHH--------HHHHHHTTCCCEEEEESCHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHH--------HHHHhhcCCCcEEEEeCCHHH
Confidence 69999999999 8888888886 21 257899999999 8877754210 111111 11235788899988
Q ss_pred hhccCcEEEEeccCCC
Q 011641 75 HVSEADIVFVSVNTPT 90 (480)
Q Consensus 75 a~~~aDvVii~Vptp~ 90 (480)
++++||+||+++|.+.
T Consensus 80 al~gAD~VVitagv~~ 95 (450)
T 1s6y_A 80 ALDGADFVTTQFRVGG 95 (450)
T ss_dssp HHTTCSEEEECCCTTH
T ss_pred HhCCCCEEEEcCCCCC
Confidence 8999999999998753
No 183
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.20 E-value=5.3e-06 Score=71.78 Aligned_cols=71 Identities=14% Similarity=0.248 Sum_probs=52.6
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCc--CCChHHHHhhhcCCCEEEecCHHH-hhcc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIY--EPGLDGVVKQCRGKNLFFSTDVEK-HVSE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~--e~~l~~~~~~~~~~~l~~t~d~~~-a~~~ 78 (480)
++|.|+|+|.+|..+|..|.+. |++|+++|+++++++.+++...+.. +....+. +++ .+.+
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~--g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~--------------l~~a~i~~ 71 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS--DIPLVVIETSRTRVDELRERGVRAVLGNAANEEI--------------MQLAHLEC 71 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHH--------------HHHTTGGG
T ss_pred CCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHH--------------HHhcCccc
Confidence 4799999999999999999998 9999999999999998876322211 1111111 111 2568
Q ss_pred CcEEEEeccC
Q 011641 79 ADIVFVSVNT 88 (480)
Q Consensus 79 aDvVii~Vpt 88 (480)
+|++|+|+|+
T Consensus 72 ad~vi~~~~~ 81 (140)
T 3fwz_A 72 AKWLILTIPN 81 (140)
T ss_dssp CSEEEECCSC
T ss_pred CCEEEEECCC
Confidence 9999999875
No 184
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.20 E-value=2.5e-06 Score=84.94 Aligned_cols=70 Identities=9% Similarity=0.091 Sum_probs=54.7
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc--c
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS--E 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--~ 78 (480)
+||+|||+|.||..++..|.+. ++++|+ ++|+++++.+.+.+.. +..+..+|+++.+. +
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~-~~~~l~av~d~~~~~~~~~~~~~-----------------~~~~~~~~~~~ll~~~~ 67 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRES-AQAEVRGIASRRLENAQKMAKEL-----------------AIPVAYGSYEELCKDET 67 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHS-SSEEEEEEBCSSSHHHHHHHHHT-----------------TCCCCBSSHHHHHHCTT
T ss_pred EEEEEECchHHHHHHHHHHHhC-CCcEEEEEEeCCHHHHHHHHHHc-----------------CCCceeCCHHHHhcCCC
Confidence 5899999999999999999885 477876 6899999888766421 11134678888776 7
Q ss_pred CcEEEEeccCC
Q 011641 79 ADIVFVSVNTP 89 (480)
Q Consensus 79 aDvVii~Vptp 89 (480)
+|+|++|+|+.
T Consensus 68 ~D~V~i~tp~~ 78 (330)
T 3e9m_A 68 IDIIYIPTYNQ 78 (330)
T ss_dssp CSEEEECCCGG
T ss_pred CCEEEEcCCCH
Confidence 99999998854
No 185
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.19 E-value=1.4e-06 Score=76.19 Aligned_cols=100 Identities=13% Similarity=0.037 Sum_probs=67.6
Q ss_pred cEEEEECC----ChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc
Q 011641 2 VKICCIGA----GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS 77 (480)
Q Consensus 2 mkI~VIGl----G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (480)
.+|+|||+ |.||..++.+|.+. |++|+.++.+. . +. .+ .++++..+++++..
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~--G~~v~~vnp~~--~-----g~-~i--------------~G~~~~~sl~el~~ 69 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQ--GYHVIPVSPKV--A-----GK-TL--------------LGQQGYATLADVPE 69 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHH--TCCEEEECSSS--T-----TS-EE--------------TTEECCSSTTTCSS
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHC--CCEEEEeCCcc--c-----cc-cc--------------CCeeccCCHHHcCC
Confidence 47999999 89999999999998 89876666543 1 00 00 13566667777667
Q ss_pred cCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcC
Q 011641 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNS 145 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~ 145 (480)
.+|++++|+|.+ .+.++++++.+ ...+.+++..||. .+++.+..++.+
T Consensus 70 ~~Dlvii~vp~~---------------~v~~v~~~~~~-~g~~~i~i~~~~~----~~~l~~~a~~~G 117 (145)
T 2duw_A 70 KVDMVDVFRNSE---------------AAWGVAQEAIA-IGAKTLWLQLGVI----NEQAAVLAREAG 117 (145)
T ss_dssp CCSEEECCSCST---------------HHHHHHHHHHH-HTCCEEECCTTCC----CHHHHHHHHTTT
T ss_pred CCCEEEEEeCHH---------------HHHHHHHHHHH-cCCCEEEEcCChH----HHHHHHHHHHcC
Confidence 899999999832 34666666665 3445666654444 456666666543
No 186
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=98.19 E-value=3.7e-06 Score=83.05 Aligned_cols=68 Identities=21% Similarity=0.264 Sum_probs=52.6
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeE-EEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc--
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEV-AVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS-- 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (480)
+|||+|||+|.||..++..|.+. +++++ .++|+++++.+.+.+. +...+|++++++
T Consensus 10 ~~~igiIG~G~~g~~~~~~l~~~-~~~~~v~v~d~~~~~~~~~~~~--------------------~~~~~~~~~~l~~~ 68 (315)
T 3c1a_A 10 PVRLALIGAGRWGKNYIRTIAGL-PGAALVRLASSNPDNLALVPPG--------------------CVIESDWRSVVSAP 68 (315)
T ss_dssp CEEEEEEECTTTTTTHHHHHHHC-TTEEEEEEEESCHHHHTTCCTT--------------------CEEESSTHHHHTCT
T ss_pred cceEEEECCcHHHHHHHHHHHhC-CCcEEEEEEeCCHHHHHHHHhh--------------------CcccCCHHHHhhCC
Confidence 36899999999999999999875 46775 5899999876543321 345677888775
Q ss_pred cCcEEEEeccCC
Q 011641 78 EADIVFVSVNTP 89 (480)
Q Consensus 78 ~aDvVii~Vptp 89 (480)
++|+|++|+|+.
T Consensus 69 ~~D~V~i~tp~~ 80 (315)
T 3c1a_A 69 EVEAVIIATPPA 80 (315)
T ss_dssp TCCEEEEESCGG
T ss_pred CCCEEEEeCChH
Confidence 799999998753
No 187
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.15 E-value=9.6e-06 Score=81.66 Aligned_cols=68 Identities=19% Similarity=0.283 Sum_probs=52.8
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc--c
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS--E 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--~ 78 (480)
+||+|||+|.||..++..|.+. ++++|+ ++|+++++.+...+. ++...+|+++.++ +
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~-~~~~l~av~d~~~~~~~~a~~~-------------------g~~~~~~~~~ll~~~~ 65 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAA-DNLEVHGVFDILAEKREAAAQK-------------------GLKIYESYEAVLADEK 65 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTS-TTEEEEEEECSSHHHHHHHHTT-------------------TCCBCSCHHHHHHCTT
T ss_pred CcEEEECcCHHHHHHHHHHHhC-CCcEEEEEEcCCHHHHHHHHhc-------------------CCceeCCHHHHhcCCC
Confidence 4799999999999999988875 578876 679999987654321 2345578888776 7
Q ss_pred CcEEEEeccCC
Q 011641 79 ADIVFVSVNTP 89 (480)
Q Consensus 79 aDvVii~Vptp 89 (480)
.|+|++|+|+.
T Consensus 66 ~D~V~i~tp~~ 76 (359)
T 3e18_A 66 VDAVLIATPND 76 (359)
T ss_dssp CCEEEECSCGG
T ss_pred CCEEEEcCCcH
Confidence 89999998854
No 188
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.14 E-value=4.8e-06 Score=83.79 Aligned_cols=71 Identities=20% Similarity=0.309 Sum_probs=55.5
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCC-CEEEecCHHHhhc--
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGK-NLFFSTDVEKHVS-- 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~-~l~~t~d~~~a~~-- 77 (480)
+||+|||+|.||..++..|..+.++++|+ ++|+++++.+.+.+.. + ..+..+|+++.++
T Consensus 24 ~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~-----------------g~~~~~~~~~~~ll~~~ 86 (357)
T 3ec7_A 24 LKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKY-----------------AIEAKDYNDYHDLINDK 86 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHH-----------------TCCCEEESSHHHHHHCT
T ss_pred eeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHh-----------------CCCCeeeCCHHHHhcCC
Confidence 58999999999999999998433578866 7899999888766420 1 1466788888776
Q ss_pred cCcEEEEeccCC
Q 011641 78 EADIVFVSVNTP 89 (480)
Q Consensus 78 ~aDvVii~Vptp 89 (480)
++|+|++|+|+.
T Consensus 87 ~~D~V~i~tp~~ 98 (357)
T 3ec7_A 87 DVEVVIITASNE 98 (357)
T ss_dssp TCCEEEECSCGG
T ss_pred CCCEEEEcCCcH
Confidence 589999998854
No 189
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=98.13 E-value=4.5e-06 Score=82.70 Aligned_cols=71 Identities=21% Similarity=0.265 Sum_probs=50.3
Q ss_pred CcEEEEECCChhHH-HHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhh-cc
Q 011641 1 MVKICCIGAGYVGG-PTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV-SE 78 (480)
Q Consensus 1 ~mkI~VIGlG~~G~-~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~-~~ 78 (480)
||||+|||+|.||. .++..|.+. ++++|+++|+++++.+.+.+.. +.-....+..+.+ .+
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~-~~~~l~v~d~~~~~~~~~a~~~-----------------g~~~~~~~~~~~l~~~ 63 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQW-PDIELVLCTRNPKVLGTLATRY-----------------RVSATCTDYRDVLQYG 63 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTS-TTEEEEEECSCHHHHHHHHHHT-----------------TCCCCCSSTTGGGGGC
T ss_pred CcEEEEECCCHHHHHHHHHHHHhC-CCceEEEEeCCHHHHHHHHHHc-----------------CCCccccCHHHHhhcC
Confidence 36999999999998 488888764 4788889999999988776421 0001012223345 68
Q ss_pred CcEEEEeccCC
Q 011641 79 ADIVFVSVNTP 89 (480)
Q Consensus 79 aDvVii~Vptp 89 (480)
+|+|++|+|+.
T Consensus 64 ~D~V~i~tp~~ 74 (323)
T 1xea_A 64 VDAVMIHAATD 74 (323)
T ss_dssp CSEEEECSCGG
T ss_pred CCEEEEECCch
Confidence 99999998853
No 190
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=98.13 E-value=1e-05 Score=81.10 Aligned_cols=69 Identities=13% Similarity=0.202 Sum_probs=54.0
Q ss_pred cEEEEECCChhHH-HHHHHHHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc--
Q 011641 2 VKICCIGAGYVGG-PTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS-- 77 (480)
Q Consensus 2 mkI~VIGlG~~G~-~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (480)
+||+|||+|.||. .++..|.+. ++++|+ ++|+++++.+.+.+. -++...+|+++.++
T Consensus 28 ~rigiIG~G~~g~~~~~~~l~~~-~~~~l~av~d~~~~~~~~~a~~------------------~g~~~~~~~~~ll~~~ 88 (350)
T 3rc1_A 28 IRVGVIGCADIAWRRALPALEAE-PLTEVTAIASRRWDRAKRFTER------------------FGGEPVEGYPALLERD 88 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHC-TTEEEEEEEESSHHHHHHHHHH------------------HCSEEEESHHHHHTCT
T ss_pred eEEEEEcCcHHHHHHHHHHHHhC-CCeEEEEEEcCCHHHHHHHHHH------------------cCCCCcCCHHHHhcCC
Confidence 6899999999998 788888875 578876 789999988876542 02344588888775
Q ss_pred cCcEEEEeccCC
Q 011641 78 EADIVFVSVNTP 89 (480)
Q Consensus 78 ~aDvVii~Vptp 89 (480)
+.|+|++|+|+.
T Consensus 89 ~~D~V~i~tp~~ 100 (350)
T 3rc1_A 89 DVDAVYVPLPAV 100 (350)
T ss_dssp TCSEEEECCCGG
T ss_pred CCCEEEECCCcH
Confidence 589999998854
No 191
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.12 E-value=9.5e-06 Score=69.62 Aligned_cols=41 Identities=32% Similarity=0.486 Sum_probs=37.0
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS 44 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~ 44 (480)
++|.|+|+|.+|..++..|.+. |++|+++|+++++++.+.+
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~--g~~v~~~d~~~~~~~~~~~ 47 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRM--GHEVLAVDINEEKVNAYAS 47 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCCEEEESCHHHHHTTTT
T ss_pred CcEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH
Confidence 4699999999999999999998 8999999999998877654
No 192
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=98.12 E-value=1.3e-05 Score=83.15 Aligned_cols=98 Identities=11% Similarity=0.058 Sum_probs=72.8
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHH-HHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRI-NAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v-~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
++|+|||+|.||..+|..+... |.+|++||+++.+. +....+ ++. .+++++++.||
T Consensus 258 ktVgIIG~G~IG~~vA~~l~~~--G~~Viv~d~~~~~~~~a~~~g--------------------~~~-~~l~ell~~aD 314 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSMKGL--GARVYITEIDPICAIQAVMEG--------------------FNV-VTLDEIVDKGD 314 (479)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH--TCEEEEECSCHHHHHHHHTTT--------------------CEE-CCHHHHTTTCS
T ss_pred CEEEEEeeCHHHHHHHHHHHhC--cCEEEEEeCChhhHHHHHHcC--------------------CEe-cCHHHHHhcCC
Confidence 5899999999999999999987 99999999999875 332221 233 46888899999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcc-hHHHHHH
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVK-TAEAIEK 139 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~g-t~~~l~~ 139 (480)
+|++|+.|+. ..+ +...+.++++.++++.++.++. ..+.+.+
T Consensus 315 iVi~~~~t~~---------lI~--------~~~l~~MK~gailiNvgrg~~EId~~aL~~ 357 (479)
T 1v8b_A 315 FFITCTGNVD---------VIK--------LEHLLKMKNNAVVGNIGHFDDEIQVNELFN 357 (479)
T ss_dssp EEEECCSSSS---------SBC--------HHHHTTCCTTCEEEECSSTTTSBCHHHHHT
T ss_pred EEEECCChhh---------hcC--------HHHHhhcCCCcEEEEeCCCCccccchhhhc
Confidence 9999965431 111 2344668999999999887663 4455544
No 193
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=98.11 E-value=7.5e-06 Score=77.78 Aligned_cols=107 Identities=16% Similarity=0.146 Sum_probs=65.5
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEE-EECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccC
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAV-VDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~-~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
||||+|+|+|.||..++..+.+. ++++.+ +|++++. . .++.+++|+++.+ ++
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~--~~eLva~~d~~~~~-----~-------------------~gv~v~~dl~~l~-~~ 55 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEK--GHEIVGVIENTPKA-----T-------------------TPYQQYQHIADVK-GA 55 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEECSSCC--------------------------CCSCBCSCTTTCT-TC
T ss_pred ceEEEEECcCHHHHHHHHHHHhC--CCEEEEEEecCccc-----c-------------------CCCceeCCHHHHh-CC
Confidence 68999999999999999999987 447665 7887542 0 1234557777766 89
Q ss_pred cEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCccc
Q 011641 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFL 159 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (480)
|++|-+.. | ..+.+.+ . +..+.-+|+.+| |.+++-.+.+.+... ...++++|.+.
T Consensus 56 DVvIDft~-p-----------------~a~~~~~-~-l~~g~~vVigTT---G~s~e~~~~l~~aa~--~~~v~~a~N~S 110 (243)
T 3qy9_A 56 DVAIDFSN-P-----------------NLLFPLL-D-EDFHLPLVVATT---GEKEKLLNKLDELSQ--NMPVFFSANMS 110 (243)
T ss_dssp SEEEECSC-H-----------------HHHHHHH-T-SCCCCCEEECCC---SSHHHHHHHHHHHTT--TSEEEECSSCC
T ss_pred CEEEEeCC-h-----------------HHHHHHH-H-HhcCCceEeCCC---CCCHHHHHHHHHHHh--cCCEEEECCcc
Confidence 99885532 2 1222333 3 666665666555 333332233333321 24567888763
No 194
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=98.11 E-value=1.2e-05 Score=81.06 Aligned_cols=70 Identities=13% Similarity=0.148 Sum_probs=54.2
Q ss_pred cEEEEECCChhHHH-HHHHHHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc--
Q 011641 2 VKICCIGAGYVGGP-TMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS-- 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (480)
+||+|||+|.||.. ++..|.+. ++.+|+ ++|+++++.+.+.+.. +.....+|+++.++
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~-~~~~l~av~d~~~~~~~~~a~~~-----------------~~~~~~~~~~~ll~~~ 67 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQM-QDIRIVAACDSDLERARRVHRFI-----------------SDIPVLDNVPAMLNQV 67 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTC-TTEEEEEEECSSHHHHGGGGGTS-----------------CSCCEESSHHHHHHHS
T ss_pred ceEEEECCCHHHHHHHHHHHHhC-CCcEEEEEEcCCHHHHHHHHHhc-----------------CCCcccCCHHHHhcCC
Confidence 58999999999985 88888764 578876 7899999988776531 12456788888776
Q ss_pred cCcEEEEeccCC
Q 011641 78 EADIVFVSVNTP 89 (480)
Q Consensus 78 ~aDvVii~Vptp 89 (480)
+.|+|++|+|+.
T Consensus 68 ~vD~V~i~tp~~ 79 (359)
T 3m2t_A 68 PLDAVVMAGPPQ 79 (359)
T ss_dssp CCSEEEECSCHH
T ss_pred CCCEEEEcCCcH
Confidence 459999998753
No 195
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=98.11 E-value=5.5e-06 Score=83.50 Aligned_cols=110 Identities=17% Similarity=0.202 Sum_probs=70.2
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEE---------EecCH
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLF---------FSTDV 72 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~---------~t~d~ 72 (480)
.||+|||+|.+|..+|..+... |.+|+++|+++++.+.+.+-...+.+...+. .. ..+..+ -..++
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~lGa~~~~l~~~~-~~--~~gya~~~~~~~~~~~~~~l 259 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRL--GAKTTGYDVRPEVAEQVRSVGAQWLDLGIDA-AG--EGGYARELSEAERAQQQQAL 259 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHH--TCEEEEECSSGGGHHHHHHTTCEECCCC----------------CHHHHHHHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCeEEeccccc-cc--cccchhhhhHHHHhhhHHHH
Confidence 4899999999999999999888 8999999999998887775222111100000 00 000000 01346
Q ss_pred HHhhccCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecC
Q 011641 73 EKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST 128 (480)
Q Consensus 73 ~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST 128 (480)
++.++++|+||.|+..|... .+-+ +.+...+.++++.+||+.|.
T Consensus 260 ~e~l~~aDIVI~tv~iPg~~-------ap~L-----vt~emv~~MkpGsVIVDvA~ 303 (381)
T 3p2y_A 260 EDAITKFDIVITTALVPGRP-------APRL-----VTAAAATGMQPGSVVVDLAG 303 (381)
T ss_dssp HHHHTTCSEEEECCCCTTSC-------CCCC-----BCHHHHHTSCTTCEEEETTG
T ss_pred HHHHhcCCEEEECCCCCCcc-------ccee-----ecHHHHhcCCCCcEEEEEeC
Confidence 67789999999997544321 1111 12456677889999998654
No 196
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=98.10 E-value=5.5e-06 Score=84.15 Aligned_cols=113 Identities=20% Similarity=0.227 Sum_probs=71.1
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCE-E-E--------ecC
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNL-F-F--------STD 71 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l-~-~--------t~d 71 (480)
.||+|||+|.+|..+|..+... |.+|+++|+++++.+.+.+-...+.+...++.-.....+.. + . ..+
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~ 268 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRL--GAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAAL 268 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHhH
Confidence 4899999999999999999887 89999999999988887753222111000000000000000 0 0 124
Q ss_pred HHHhhccCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecC
Q 011641 72 VEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST 128 (480)
Q Consensus 72 ~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST 128 (480)
++++++++|+||.|+..|... .+.+ +.++..+.++++.+||+.|.
T Consensus 269 l~e~l~~aDVVI~tvlipg~~-------ap~L-----vt~emv~~Mk~GsVIVDvA~ 313 (405)
T 4dio_A 269 VAEHIAKQDIVITTALIPGRP-------APRL-----VTREMLDSMKPGSVVVDLAV 313 (405)
T ss_dssp HHHHHHTCSEEEECCCCSSSC-------CCCC-----BCHHHHTTSCTTCEEEETTG
T ss_pred HHHHhcCCCEEEECCcCCCCC-------CCEE-----ecHHHHhcCCCCCEEEEEeC
Confidence 677789999999997555321 1221 12566778899999998764
No 197
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=98.10 E-value=2.9e-06 Score=84.95 Aligned_cols=71 Identities=14% Similarity=0.180 Sum_probs=49.8
Q ss_pred CcEEEEECCChhHHHHHHH-HHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhcc
Q 011641 1 MVKICCIGAGYVGGPTMAV-IALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE 78 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~-La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (480)
|+||+|||+|.||..+... +....++++|+ ++|+++++.+...+ .......+|+++.+.+
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~------------------~~~~~~~~~~~~ll~~ 63 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPI------------------YSHIHFTSDLDEVLND 63 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGG------------------GTTCEEESCTHHHHTC
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHh------------------cCCCceECCHHHHhcC
Confidence 4799999999999864433 42333578877 78998776532221 0235677899988765
Q ss_pred --CcEEEEeccCC
Q 011641 79 --ADIVFVSVNTP 89 (480)
Q Consensus 79 --aDvVii~Vptp 89 (480)
.|+|++|+|+.
T Consensus 64 ~~~D~V~i~tp~~ 76 (345)
T 3f4l_A 64 PDVKLVVVCTHAD 76 (345)
T ss_dssp TTEEEEEECSCGG
T ss_pred CCCCEEEEcCChH
Confidence 89999998754
No 198
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.09 E-value=7.3e-06 Score=81.00 Aligned_cols=69 Identities=14% Similarity=0.218 Sum_probs=51.0
Q ss_pred cEEEEECCChhHHH-HHHHHHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccC
Q 011641 2 VKICCIGAGYVGGP-TMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
|||+|||+|.||.. ++..|.+. ++++++ ++|+++++.+.+.+.. ++.+++++++...++
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~-~~~~lvav~d~~~~~~~~~~~~~------------------g~~~~~~~~~l~~~~ 66 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAA-SDWTLQGAWSPTRAKALPICESW------------------RIPYADSLSSLAASC 66 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSC-SSEEEEEEECSSCTTHHHHHHHH------------------TCCBCSSHHHHHTTC
T ss_pred ceEEEECCCHHHHHHHHHHHHhC-CCeEEEEEECCCHHHHHHHHHHc------------------CCCccCcHHHhhcCC
Confidence 68999999999996 88888764 478876 8999998877665410 112456666544689
Q ss_pred cEEEEeccCC
Q 011641 80 DIVFVSVNTP 89 (480)
Q Consensus 80 DvVii~Vptp 89 (480)
|+|++|+|+.
T Consensus 67 D~V~i~tp~~ 76 (319)
T 1tlt_A 67 DAVFVHSSTA 76 (319)
T ss_dssp SEEEECSCTT
T ss_pred CEEEEeCCch
Confidence 9999998853
No 199
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.09 E-value=7e-06 Score=74.18 Aligned_cols=72 Identities=10% Similarity=0.146 Sum_probs=51.1
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCc--CCChHHHHhhhcCCCEEEecCHHHh--hc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIY--EPGLDGVVKQCRGKNLFFSTDVEKH--VS 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~--e~~l~~~~~~~~~~~l~~t~d~~~a--~~ 77 (480)
++|.|+|+|.||..+|..|.+.+ |++|+++|+++++++.+.+...... +..-.+ .+.++ +.
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~-g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~--------------~l~~~~~~~ 104 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARY-GKISLGIEIREEAAQQHRSEGRNVISGDATDPD--------------FWERILDTG 104 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHH-CSCEEEEESCHHHHHHHHHTTCCEEECCTTCHH--------------HHHTBCSCC
T ss_pred CcEEEECCCHHHHHHHHHHHhcc-CCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHH--------------HHHhccCCC
Confidence 57999999999999999998731 6899999999999988875322211 100000 12233 56
Q ss_pred cCcEEEEeccC
Q 011641 78 EADIVFVSVNT 88 (480)
Q Consensus 78 ~aDvVii~Vpt 88 (480)
++|+||+|+|.
T Consensus 105 ~ad~vi~~~~~ 115 (183)
T 3c85_A 105 HVKLVLLAMPH 115 (183)
T ss_dssp CCCEEEECCSS
T ss_pred CCCEEEEeCCC
Confidence 89999999774
No 200
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=98.08 E-value=9.5e-06 Score=81.17 Aligned_cols=72 Identities=14% Similarity=0.181 Sum_probs=54.0
Q ss_pred CcEEEEECCChhHHH-HHHHHHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc-
Q 011641 1 MVKICCIGAGYVGGP-TMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS- 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~-lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~- 77 (480)
|+||||||+|.||.. ++..+... ++.+|+ ++|+++++.+++.+.. +-.++.+|+++.++
T Consensus 23 mirigiIG~G~ig~~~~~~~~~~~-~~~~lvav~d~~~~~a~~~a~~~-----------------g~~~~y~d~~ell~~ 84 (350)
T 4had_A 23 MLRFGIISTAKIGRDNVVPAIQDA-ENCVVTAIASRDLTRAREMADRF-----------------SVPHAFGSYEEMLAS 84 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHC-SSEEEEEEECSSHHHHHHHHHHH-----------------TCSEEESSHHHHHHC
T ss_pred ccEEEEEcChHHHHHHHHHHHHhC-CCeEEEEEECCCHHHHHHHHHHc-----------------CCCeeeCCHHHHhcC
Confidence 689999999999975 45666654 577876 6899999988876520 11256789998774
Q ss_pred -cCcEEEEeccCCC
Q 011641 78 -EADIVFVSVNTPT 90 (480)
Q Consensus 78 -~aDvVii~Vptp~ 90 (480)
+.|+|+||+|+..
T Consensus 85 ~~iDaV~I~tP~~~ 98 (350)
T 4had_A 85 DVIDAVYIPLPTSQ 98 (350)
T ss_dssp SSCSEEEECSCGGG
T ss_pred CCCCEEEEeCCCch
Confidence 5899999988643
No 201
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=98.07 E-value=1.6e-05 Score=80.08 Aligned_cols=67 Identities=21% Similarity=0.362 Sum_probs=51.0
Q ss_pred cEEEEECCChhHHH-HHHHHHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc--
Q 011641 2 VKICCIGAGYVGGP-TMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS-- 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (480)
+||+|||+|.||.. .+..+.+. ++++|+ ++|++++++++-. +..++.+|+++.++
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~-~~~~l~av~d~~~~~~~~~~--------------------~~~~~~~~~~~ll~~~ 66 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSV-PGLNLAFVASRDEEKVKRDL--------------------PDVTVIASPEAAVQHP 66 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTS-TTEEEEEEECSCHHHHHHHC--------------------TTSEEESCHHHHHTCT
T ss_pred ceEEEECCCHHHHHHHHHHHhhC-CCeEEEEEEcCCHHHHHhhC--------------------CCCcEECCHHHHhcCC
Confidence 58999999999997 66666654 578875 7899998765211 23467789999877
Q ss_pred cCcEEEEeccCC
Q 011641 78 EADIVFVSVNTP 89 (480)
Q Consensus 78 ~aDvVii~Vptp 89 (480)
+.|+|++|+|+.
T Consensus 67 ~~D~V~i~tp~~ 78 (364)
T 3e82_A 67 DVDLVVIASPNA 78 (364)
T ss_dssp TCSEEEECSCGG
T ss_pred CCCEEEEeCChH
Confidence 789999998754
No 202
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=98.07 E-value=1.1e-05 Score=79.94 Aligned_cols=98 Identities=12% Similarity=0.069 Sum_probs=71.6
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.+|..++..|+...+..+|.+||+++++.+++.+.. .. ..-.+. .+++++++ ++|+
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~------------~~-~~~~~~-~~~~~e~v-~aDv 190 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYC------------ED-RGISAS-VQPAEEAS-RCDV 190 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHH------------HH-TTCCEE-ECCHHHHT-SSSE
T ss_pred CEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHH------------Hh-cCceEE-ECCHHHHh-CCCE
Confidence 589999999999999999987423578999999999998876420 00 001245 67888888 9999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcch
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKT 133 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
|++|+|+.... .+ ...++++++|+..++..|+.
T Consensus 191 Vi~aTp~~~pv--------~~-----------~~~l~~G~~V~~ig~~~p~~ 223 (322)
T 1omo_A 191 LVTTTPSRKPV--------VK-----------AEWVEEGTHINAIGADGPGK 223 (322)
T ss_dssp EEECCCCSSCC--------BC-----------GGGCCTTCEEEECSCCSTTC
T ss_pred EEEeeCCCCce--------ec-----------HHHcCCCeEEEECCCCCCCc
Confidence 99998753210 00 14678899998887776664
No 203
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=98.07 E-value=1.5e-05 Score=83.06 Aligned_cols=91 Identities=14% Similarity=0.064 Sum_probs=68.3
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |.+|++||+++.+....... +.+. .+++++++.||+
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~--G~~V~v~d~~~~~~~~a~~~-------------------G~~~-~~l~ell~~aDi 335 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGL--GATVWVTEIDPICALQAAME-------------------GYRV-VTMEYAADKADI 335 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCEEEEECSCHHHHHHHHTT-------------------TCEE-CCHHHHTTTCSE
T ss_pred CEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCChHhHHHHHHc-------------------CCEe-CCHHHHHhcCCE
Confidence 5899999999999999999877 99999999998864222211 1233 367888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPV 131 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~ 131 (480)
|++++.|+. ..+ +...+.++++.+|++.+..+.
T Consensus 336 Vi~~~~t~~---------lI~--------~~~l~~MK~gAilINvgrg~v 368 (494)
T 3d64_A 336 FVTATGNYH---------VIN--------HDHMKAMRHNAIVCNIGHFDS 368 (494)
T ss_dssp EEECSSSSC---------SBC--------HHHHHHCCTTEEEEECSSSSC
T ss_pred EEECCCccc---------ccC--------HHHHhhCCCCcEEEEcCCCcc
Confidence 999985532 111 234567899999999887655
No 204
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=98.04 E-value=3.6e-05 Score=75.66 Aligned_cols=117 Identities=23% Similarity=0.319 Sum_probs=72.6
Q ss_pred cEEEEEC-CChhHHHHHHHHHHcCCCC--eEEEEEC--CHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhh
Q 011641 2 VKICCIG-AGYVGGPTMAVIALKCPSI--EVAVVDI--SVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV 76 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~--~V~~~D~--~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~ 76 (480)
|||+|+| +|.+|.+++..|+.+ |+ ++.++|+ ++++++.... .+.+... .....+++.+..+++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~--~~~~el~L~Di~~~~~~~~~~~~--------dl~~~~~--~~~~~~v~~~~~~a~ 68 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALR--DIADEVVFVDIPDKEDDTVGQAA--------DTNHGIA--YDSNTRVRQGGYEDT 68 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCCSEEEEECCGGGHHHHHHHHH--------HHHHHHT--TTCCCEEEECCGGGG
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCCCEEEEEcCCCChhhHHHHHH--------HHHHHHh--hCCCcEEEeCCHHHh
Confidence 7999999 999999999999886 54 7999999 8876543221 0111110 012233332335679
Q ss_pred ccCcEEEEeccCCCCCCCCCCCCCCCh-----HHHHHHHHHHHhhCCCCcEEEEecCCCcchHHH
Q 011641 77 SEADIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARVIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 77 ~~aDvVii~Vptp~~~~~~~~~~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
++||+||++.+.|... + ....|+ ..+++.++.+.++. ++.+|++ +|.|.++...
T Consensus 69 ~~aDvVi~~ag~~~~~-g---~~r~dl~~~N~~i~~~i~~~i~~~~-p~~~viv-~SNPv~~~~~ 127 (303)
T 1o6z_A 69 AGSDVVVITAGIPRQP-G---QTRIDLAGDNAPIMEDIQSSLDEHN-DDYISLT-TSNPVDLLNR 127 (303)
T ss_dssp TTCSEEEECCCCCCCT-T---CCHHHHHHHHHHHHHHHHHHHHTTC-SCCEEEE-CCSSHHHHHH
T ss_pred CCCCEEEEcCCCCCCC-C---CCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEE-eCChHHHHHH
Confidence 9999999998876532 1 011121 33455555665553 4565555 6888877443
No 205
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=98.04 E-value=8e-06 Score=76.10 Aligned_cols=41 Identities=10% Similarity=0.115 Sum_probs=38.6
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS 44 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~ 44 (480)
|||.|+|+|.+|..+|..|.++ |++|+++|+++++++.+.+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~--g~~v~vid~~~~~~~~l~~ 41 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSR--KYGVVIINKDRELCEEFAK 41 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHH
Confidence 8999999999999999999998 9999999999999988764
No 206
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=98.03 E-value=2.2e-05 Score=78.93 Aligned_cols=74 Identities=18% Similarity=0.293 Sum_probs=55.0
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeE-EEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc--
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEV-AVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS-- 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (480)
+|||+|||+|.||..++..|... +++++ .++|+++++.+.+.+... + .......+|+++.++
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~-~~~~lv~v~d~~~~~~~~~a~~~~-~-------------~~~~~~~~~~~~ll~~~ 70 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLA-PNATISGVASRSLEKAKAFATANN-Y-------------PESTKIHGSYESLLEDP 70 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHC-TTEEEEEEECSSHHHHHHHHHHTT-C-------------CTTCEEESSHHHHHHCT
T ss_pred ceEEEEECchHHHHHHHHHHhhC-CCcEEEEEEcCCHHHHHHHHHHhC-C-------------CCCCeeeCCHHHHhcCC
Confidence 47899999999999999988875 46776 578999998877654210 0 002356788888775
Q ss_pred cCcEEEEeccCC
Q 011641 78 EADIVFVSVNTP 89 (480)
Q Consensus 78 ~aDvVii~Vptp 89 (480)
++|+|++|+|+.
T Consensus 71 ~~D~V~i~tp~~ 82 (362)
T 1ydw_A 71 EIDALYVPLPTS 82 (362)
T ss_dssp TCCEEEECCCGG
T ss_pred CCCEEEEcCChH
Confidence 589999998753
No 207
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=98.02 E-value=1.4e-05 Score=79.27 Aligned_cols=69 Identities=25% Similarity=0.240 Sum_probs=52.0
Q ss_pred cEEEEECCChhHHHH-HHHHHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc--
Q 011641 2 VKICCIGAGYVGGPT-MAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS-- 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~l-A~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (480)
|||+|||+|.||..+ +..|.+. +++++ ++|+++++.+.+.+.. +.....+|+++.++
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~--~~~~vav~d~~~~~~~~~~~~~-----------------g~~~~~~~~~~~l~~~ 61 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRAT--GGEVVSMMSTSAERGAAYATEN-----------------GIGKSVTSVEELVGDP 61 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHT--TCEEEEEECSCHHHHHHHHHHT-----------------TCSCCBSCHHHHHTCT
T ss_pred CeEEEEcccHHHHHhhhHHhhcC--CCeEEEEECCCHHHHHHHHHHc-----------------CCCcccCCHHHHhcCC
Confidence 699999999999998 7777764 88866 7899999887765421 11123567787765
Q ss_pred cCcEEEEeccCC
Q 011641 78 EADIVFVSVNTP 89 (480)
Q Consensus 78 ~aDvVii~Vptp 89 (480)
++|+|++|+|+.
T Consensus 62 ~~D~V~i~tp~~ 73 (332)
T 2glx_A 62 DVDAVYVSTTNE 73 (332)
T ss_dssp TCCEEEECSCGG
T ss_pred CCCEEEEeCChh
Confidence 599999998753
No 208
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=98.02 E-value=1.1e-05 Score=80.17 Aligned_cols=70 Identities=14% Similarity=0.167 Sum_probs=51.2
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc--c
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS--E 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--~ 78 (480)
+||+|||+|.||..++..|.+. ++.+|+ ++|+++++.+.+.+.. +..+..+|+++.+. +
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~-~~~~~~av~d~~~~~~~~~a~~~-----------------~~~~~~~~~~~ll~~~~ 67 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLA-GNGEVVAVSSRTLESAQAFANKY-----------------HLPKAYDKLEDMLADES 67 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHH-CSEEEEEEECSCSSTTCC---CC-----------------CCSCEESCHHHHHTCTT
T ss_pred eEEEEEechHHHHHHHHHHHhC-CCcEEEEEEcCCHHHHHHHHHHc-----------------CCCcccCCHHHHhcCCC
Confidence 6899999999999999999875 356655 6799988765544320 11135688888877 7
Q ss_pred CcEEEEeccCC
Q 011641 79 ADIVFVSVNTP 89 (480)
Q Consensus 79 aDvVii~Vptp 89 (480)
+|+|++|+|+.
T Consensus 68 ~D~V~i~tp~~ 78 (329)
T 3evn_A 68 IDVIYVATINQ 78 (329)
T ss_dssp CCEEEECSCGG
T ss_pred CCEEEECCCcH
Confidence 89999998854
No 209
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.01 E-value=7e-06 Score=81.08 Aligned_cols=98 Identities=15% Similarity=0.105 Sum_probs=68.9
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
.+|+|||+|.+|..++..|....+..+|++||++ +.+++.+. +-.+ ....+... ++++++++||+
T Consensus 122 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--~a~~la~~-----------l~~~-~g~~~~~~-~~~eav~~aDI 186 (313)
T 3hdj_A 122 SVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY--ASPEILER-----------IGRR-CGVPARMA-APADIAAQADI 186 (313)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--CCHHHHHH-----------HHHH-HTSCEEEC-CHHHHHHHCSE
T ss_pred cEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--HHHHHHHH-----------HHHh-cCCeEEEe-CHHHHHhhCCE
Confidence 5799999999999999999874345789999998 44444321 0000 01234566 89999999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcch
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKT 133 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
||.|+|++. +- +. ...++++++|+..++..|+.
T Consensus 187 Vi~aT~s~~----------pv-------l~--~~~l~~G~~V~~vGs~~p~~ 219 (313)
T 3hdj_A 187 VVTATRSTT----------PL-------FA--GQALRAGAFVGAIGSSLPHT 219 (313)
T ss_dssp EEECCCCSS----------CS-------SC--GGGCCTTCEEEECCCSSTTC
T ss_pred EEEccCCCC----------cc-------cC--HHHcCCCcEEEECCCCCCch
Confidence 999987531 11 11 24688999998888877765
No 210
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.99 E-value=1.6e-05 Score=79.17 Aligned_cols=71 Identities=17% Similarity=0.262 Sum_probs=53.3
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCC--Ce-EEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPS--IE-VAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G--~~-V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (480)
|+||+|||+|.||..++..|.+. ++ ++ |.++|+++++.+.+.+.. +..+..+|+++.++
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~~-~~~~~~l~av~d~~~~~a~~~a~~~-----------------~~~~~~~~~~~ll~ 63 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQTL-PRSEHQVVAVAARDLSRAKEFAQKH-----------------DIPKAYGSYEELAK 63 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTS-CTTTEEEEEEECSSHHHHHHHHHHH-----------------TCSCEESSHHHHHH
T ss_pred ccEEEEECchHHHHHHHHHHHhC-CCCCeEEEEEEcCCHHHHHHHHHHc-----------------CCCcccCCHHHHhc
Confidence 36999999999999999988765 22 34 556899999988776420 11135678888776
Q ss_pred --cCcEEEEeccCC
Q 011641 78 --EADIVFVSVNTP 89 (480)
Q Consensus 78 --~aDvVii~Vptp 89 (480)
+.|+|++|+|+.
T Consensus 64 ~~~vD~V~i~tp~~ 77 (334)
T 3ohs_X 64 DPNVEVAYVGTQHP 77 (334)
T ss_dssp CTTCCEEEECCCGG
T ss_pred CCCCCEEEECCCcH
Confidence 699999998754
No 211
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=97.97 E-value=6e-05 Score=74.26 Aligned_cols=115 Identities=19% Similarity=0.227 Sum_probs=72.5
Q ss_pred cEEEEEC-CChhHHHHHHHHHHc-CCCCeEEEEECCHH---HHHHHHcCCCCCcCCChHHHHhhhcCCCEEE--ecCHHH
Q 011641 2 VKICCIG-AGYVGGPTMAVIALK-CPSIEVAVVDISVS---RINAWNSDQLPIYEPGLDGVVKQCRGKNLFF--STDVEK 74 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~-~~G~~V~~~D~~~~---~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~--t~d~~~ 74 (480)
|||+||| +|++|.++|..|+.+ ....++.++|+++. ....|+.. +. .-.++. +++..+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~--~~-------------~~~v~~~~~~~~~~ 65 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHI--PT-------------AVKIKGFSGEDATP 65 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTS--CS-------------SEEEEEECSSCCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCC--CC-------------CceEEEecCCCcHH
Confidence 8999999 899999999999874 22468999999871 12222221 10 012332 124445
Q ss_pred hhccCcEEEEeccCCCCCCCCCCCCCC-----ChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHH
Q 011641 75 HVSEADIVFVSVNTPTKTQGLGAGKAA-----DLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 75 a~~~aDvVii~Vptp~~~~~~~~~~~~-----d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
++++||+||++.+.|.... ..+. +.+.+++..+.|.++.+ +.++++- |.|..+.-.+
T Consensus 66 ~~~~aDivii~ag~~rkpG----~~R~dll~~N~~I~~~i~~~i~~~~p-~a~vlvv-tNPvd~~t~~ 127 (312)
T 3hhp_A 66 ALEGADVVLISAGVARKPG----MDRSDLFNVNAGIVKNLVQQVAKTCP-KACIGII-TNPVNTTVAI 127 (312)
T ss_dssp HHTTCSEEEECCSCSCCTT----CCHHHHHHHHHHHHHHHHHHHHHHCT-TSEEEEC-SSCHHHHHHH
T ss_pred HhCCCCEEEEeCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHHCC-CcEEEEe-cCcchhHHHH
Confidence 6999999999998876441 1122 33445666677777754 5555443 6787775544
No 212
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.93 E-value=1.6e-05 Score=79.19 Aligned_cols=69 Identities=13% Similarity=0.145 Sum_probs=51.7
Q ss_pred cEEEEECCChhHH-HHHHHHHHcCCCCeE-EEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc--
Q 011641 2 VKICCIGAGYVGG-PTMAVIALKCPSIEV-AVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS-- 77 (480)
Q Consensus 2 mkI~VIGlG~~G~-~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (480)
+||||||+|.+|. .++..|... +++| .++|+++++.+.+.+.. +..++.+|+++.++
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~--~~~lvav~d~~~~~~~~~a~~~-----------------~~~~~~~~~~~ll~~~ 65 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDA--GAELAGVFESDSDNRAKFTSLF-----------------PSVPFAASAEQLITDA 65 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHT--TCEEEEEECSCTTSCHHHHHHS-----------------TTCCBCSCHHHHHTCT
T ss_pred cEEEEECCChHHHHHhhhhhcCC--CcEEEEEeCCCHHHHHHHHHhc-----------------CCCcccCCHHHHhhCC
Confidence 6899999999996 677777654 8885 58899998877665421 12345678888775
Q ss_pred cCcEEEEeccCC
Q 011641 78 EADIVFVSVNTP 89 (480)
Q Consensus 78 ~aDvVii~Vptp 89 (480)
+.|+|++|+|+.
T Consensus 66 ~~D~V~i~tp~~ 77 (336)
T 2p2s_A 66 SIDLIACAVIPC 77 (336)
T ss_dssp TCCEEEECSCGG
T ss_pred CCCEEEEeCChh
Confidence 689999998754
No 213
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.93 E-value=3.6e-05 Score=75.68 Aligned_cols=87 Identities=16% Similarity=0.320 Sum_probs=53.7
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+||+|||+|.||..++..|.+. +++++. ++|+++++.+. .| .+ ....+++.+ ..++|
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~-~~~elvav~d~~~~~~~~--~g-~~-----------------~~~~~~l~~-~~~~D 67 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREA-PDFEIAGIVRRNPAEVPF--EL-QP-----------------FRVVSDIEQ-LESVD 67 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-TTEEEEEEECC---------CC-TT-----------------SCEESSGGG-SSSCC
T ss_pred CEEEEECChHHHHHHHHHHhcC-CCCEEEEEEcCCHHHHHH--cC-CC-----------------cCCHHHHHh-CCCCC
Confidence 5899999999999999999874 578887 68999887654 11 11 112345444 37899
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecC
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST 128 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST 128 (480)
+|++|+|+.. -.+.+...++.+.-|++++.
T Consensus 68 vViiatp~~~------------------h~~~~~~al~aG~~Vi~ekP 97 (304)
T 3bio_A 68 VALVCSPSRE------------------VERTALEILKKGICTADSFD 97 (304)
T ss_dssp EEEECSCHHH------------------HHHHHHHHHTTTCEEEECCC
T ss_pred EEEECCCchh------------------hHHHHHHHHHcCCeEEECCC
Confidence 9999977421 12233344556777776654
No 214
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=97.92 E-value=4.8e-05 Score=79.40 Aligned_cols=90 Identities=18% Similarity=0.136 Sum_probs=67.3
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.||..+|..+... |.+|+++|+++++.+...+. +... .+++++++++|+
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~--Ga~Viv~d~~~~~~~~A~~~-------------------Ga~~-~~l~e~l~~aDv 332 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQ--GARVSVTEIDPINALQAMME-------------------GFDV-VTVEEAIGDADI 332 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT-------------------TCEE-CCHHHHGGGCSE
T ss_pred CEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc-------------------CCEE-ecHHHHHhCCCE
Confidence 5799999999999999999887 89999999999887654431 1222 356677889999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCC
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVP 130 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~ 130 (480)
||.|++++.. .+ .+..+.++++.+|++.+...
T Consensus 333 Vi~atgt~~~---------i~--------~~~l~~mk~ggilvnvG~~~ 364 (494)
T 3ce6_A 333 VVTATGNKDI---------IM--------LEHIKAMKDHAILGNIGHFD 364 (494)
T ss_dssp EEECSSSSCS---------BC--------HHHHHHSCTTCEEEECSSSG
T ss_pred EEECCCCHHH---------HH--------HHHHHhcCCCcEEEEeCCCC
Confidence 9999876421 11 23445678899998876654
No 215
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=97.92 E-value=9.4e-05 Score=73.60 Aligned_cols=106 Identities=14% Similarity=0.210 Sum_probs=72.4
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
+++||||+|.+|..+|..+..- |.+|++||+.+.... .. ..... .++++.++.||+
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~f--g~~v~~~d~~~~~~~--~~-------------------~~~~~-~~l~ell~~sDi 197 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAF--GMKVLCYDVVKREDL--KE-------------------KGCVY-TSLDELLKESDV 197 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCHHH--HH-------------------TTCEE-CCHHHHHHHCSE
T ss_pred cEEEEECcchHHHHHHHhhccc--CceeeecCCccchhh--hh-------------------cCcee-cCHHHHHhhCCE
Confidence 4799999999999999998876 999999998643211 11 11232 467888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
|.+++|-.....+ -.| +.....++++.++|+.|=.+.=..+.|.+.|++.
T Consensus 198 vslh~Plt~~T~~-----li~--------~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g 247 (334)
T 3kb6_A 198 ISLHVPYTKETHH-----MIN--------EERISLMKDGVYLINTARGKVVDTDALYRAYQRG 247 (334)
T ss_dssp EEECCCCCTTTTT-----CBC--------HHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred EEEcCCCChhhcc-----CcC--------HHHHhhcCCCeEEEecCccccccHHHHHHHHHhC
Confidence 9999884322211 223 2334568899999986644333345677777653
No 216
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.91 E-value=2e-05 Score=79.59 Aligned_cols=108 Identities=14% Similarity=0.123 Sum_probs=71.0
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
+||+|||+|.||.++|..|++. ++|+++||++++++.+.+....+. -.+.-..+++++++++|+
T Consensus 17 ~~v~IiGaG~iG~~ia~~L~~~---~~V~V~~R~~~~a~~la~~~~~~~-------------~d~~~~~~l~~ll~~~Dv 80 (365)
T 2z2v_A 17 MKVLILGAGNIGRAIAWDLKDE---FDVYIGDVNNENLEKVKEFATPLK-------------VDASNFDKLVEVMKEFEL 80 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT---SEEEEEESCHHHHHHHTTTSEEEE-------------CCTTCHHHHHHHHTTCSC
T ss_pred CeEEEEcCCHHHHHHHHHHHcC---CeEEEEECCHHHHHHHHhhCCeEE-------------EecCCHHHHHHHHhCCCE
Confidence 6899999999999999999975 799999999999998875311000 000001345667789999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
||.|+|...+ ..+. ...++.++.+++.|+.++.+ +.+.+..++.
T Consensus 81 VIn~~P~~~~---------------~~v~---~a~l~~G~~~vD~s~~~~~~-~~l~~~Ak~a 124 (365)
T 2z2v_A 81 VIGALPGFLG---------------FKSI---KAAIKSKVDMVDVSFMPENP-LELRDEAEKA 124 (365)
T ss_dssp EEECCCHHHH---------------HHHH---HHHHHTTCCEEECCCCSSCG-GGGHHHHHHT
T ss_pred EEECCChhhh---------------HHHH---HHHHHhCCeEEEccCCcHHH-HHHHHHHHHc
Confidence 9999763210 1122 23345677788878765554 3444444544
No 217
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.91 E-value=5.3e-05 Score=75.90 Aligned_cols=68 Identities=21% Similarity=0.394 Sum_probs=51.3
Q ss_pred cEEEEECCChhHHH-HHHHHHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhcc-
Q 011641 2 VKICCIGAGYVGGP-TMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE- 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~- 78 (480)
+||+|||+|.||.. .+..+.+. ++++|+ ++|+++++.+ +. . +..++.+|+++.+.+
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~-~~~~l~av~d~~~~~~~---~~-~----------------~~~~~~~~~~~ll~~~ 66 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGT-PGLELAGVSSSDASKVH---AD-W----------------PAIPVVSDPQMLFNDP 66 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTS-TTEEEEEEECSCHHHHH---TT-C----------------SSCCEESCHHHHHHCS
T ss_pred ceEEEECCCHHHHHHHHHHHhhC-CCcEEEEEECCCHHHHH---hh-C----------------CCCceECCHHHHhcCC
Confidence 58999999999997 67777664 577875 7899998775 11 0 134567889887764
Q ss_pred -CcEEEEeccCCC
Q 011641 79 -ADIVFVSVNTPT 90 (480)
Q Consensus 79 -aDvVii~Vptp~ 90 (480)
.|+|++|+|+..
T Consensus 67 ~vD~V~i~tp~~~ 79 (352)
T 3kux_A 67 SIDLIVIPTPNDT 79 (352)
T ss_dssp SCCEEEECSCTTT
T ss_pred CCCEEEEeCChHH
Confidence 899999988653
No 218
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.91 E-value=4.3e-05 Score=76.78 Aligned_cols=68 Identities=10% Similarity=0.212 Sum_probs=50.5
Q ss_pred cEEEEECCChhHHH-HHHHHHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc--
Q 011641 2 VKICCIGAGYVGGP-TMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS-- 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (480)
+||||||+|.||.. .+..+.+. ++++|+ ++|++++++.+-- +..++.+|+++.++
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~-~~~~l~av~d~~~~~~~~~~--------------------~~~~~~~~~~~ll~~~ 64 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVL-DEYQISKIMTSRTEEVKRDF--------------------PDAEVVHELEEITNDP 64 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTC-TTEEEEEEECSCHHHHHHHC--------------------TTSEEESSTHHHHTCT
T ss_pred ceEEEEccCHHHHHHHHHHHhhC-CCeEEEEEEcCCHHHHHhhC--------------------CCCceECCHHHHhcCC
Confidence 58999999999997 66666654 578875 6799987643211 13467788888876
Q ss_pred cCcEEEEeccCCC
Q 011641 78 EADIVFVSVNTPT 90 (480)
Q Consensus 78 ~aDvVii~Vptp~ 90 (480)
+.|+|++|+|+..
T Consensus 65 ~vD~V~i~tp~~~ 77 (358)
T 3gdo_A 65 AIELVIVTTPSGL 77 (358)
T ss_dssp TCCEEEECSCTTT
T ss_pred CCCEEEEcCCcHH
Confidence 7899999988653
No 219
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.90 E-value=2.4e-05 Score=76.65 Aligned_cols=112 Identities=14% Similarity=0.131 Sum_probs=72.8
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCC-eEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
++|.|||+|.+|.+++..|++. |. +|++++|++++.+.+.+...... +......++.+.+.++|
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~--G~~~V~v~nR~~~ka~~la~~~~~~~-------------~~~~~~~~~~~~~~~aD 206 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLST--AAERIDMANRTVEKAERLVREGDERR-------------SAYFSLAEAETRLAEYD 206 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCSEEEEECSSHHHHHHHHHHSCSSS-------------CCEECHHHHHHTGGGCS
T ss_pred CEEEEECcHHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHhhhcc-------------CceeeHHHHHhhhccCC
Confidence 5799999999999999999998 87 99999999999888764210000 01111124455678999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHh
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTH 143 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~ 143 (480)
+||.|+|.+...+. ..+- +. ...++++.+|++.++.|..| + +.+..++
T Consensus 207 ivIn~t~~~~~~~~----~~~~---i~------~~~l~~~~~v~D~~y~P~~T-~-ll~~A~~ 254 (297)
T 2egg_A 207 IIINTTSVGMHPRV----EVQP---LS------LERLRPGVIVSDIIYNPLET-K-WLKEAKA 254 (297)
T ss_dssp EEEECSCTTCSSCC----SCCS---SC------CTTCCTTCEEEECCCSSSSC-H-HHHHHHH
T ss_pred EEEECCCCCCCCCC----CCCC---CC------HHHcCCCCEEEEcCCCCCCC-H-HHHHHHH
Confidence 99999886543200 0000 00 13467789999998865444 4 4333443
No 220
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=97.89 E-value=3.5e-05 Score=78.72 Aligned_cols=90 Identities=19% Similarity=0.136 Sum_probs=66.2
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||+|.+|..+|..|... |.+|+++|+++.+....... +... .+++++++.||+
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~--Ga~Viv~D~~p~~a~~A~~~-------------------G~~~-~sL~eal~~ADV 269 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGF--GARVVVTEVDPINALQAAME-------------------GYQV-LLVEDVVEEAHI 269 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT-------------------TCEE-CCHHHHTTTCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHHC--CCEEEEECCChhhhHHHHHh-------------------CCee-cCHHHHHhhCCE
Confidence 5799999999999999999987 99999999998765433221 1232 478889999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCC
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVP 130 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~ 130 (480)
|+++.++..- .+ ......++++.+|++.+-.+
T Consensus 270 Vilt~gt~~i---------I~--------~e~l~~MK~gAIVINvgRg~ 301 (436)
T 3h9u_A 270 FVTTTGNDDI---------IT--------SEHFPRMRDDAIVCNIGHFD 301 (436)
T ss_dssp EEECSSCSCS---------BC--------TTTGGGCCTTEEEEECSSSG
T ss_pred EEECCCCcCc---------cC--------HHHHhhcCCCcEEEEeCCCC
Confidence 9987655321 11 12345678999999876443
No 221
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.87 E-value=2.4e-05 Score=79.59 Aligned_cols=70 Identities=9% Similarity=0.158 Sum_probs=54.5
Q ss_pred CcEEEEECCC-hhHHHHHHHHHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc-
Q 011641 1 MVKICCIGAG-YVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS- 77 (480)
Q Consensus 1 ~mkI~VIGlG-~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~- 77 (480)
++||+|||+| .||..++..|.+. ++.+++ ++|+++++.+.+.+. -++...+|+++.++
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~-~~~~l~av~d~~~~~~~~~a~~------------------~g~~~~~~~~ell~~ 62 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHH-PDAQIVAACDPNEDVRERFGKE------------------YGIPVFATLAEMMQH 62 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHC-TTEEEEEEECSCHHHHHHHHHH------------------HTCCEESSHHHHHHH
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhC-CCeEEEEEEeCCHHHHHHHHHH------------------cCCCeECCHHHHHcC
Confidence 3799999999 9999999999875 467765 789999988776542 02345688888776
Q ss_pred -cCcEEEEeccCC
Q 011641 78 -EADIVFVSVNTP 89 (480)
Q Consensus 78 -~aDvVii~Vptp 89 (480)
++|+|++|+|+.
T Consensus 63 ~~vD~V~i~tp~~ 75 (387)
T 3moi_A 63 VQMDAVYIASPHQ 75 (387)
T ss_dssp SCCSEEEECSCGG
T ss_pred CCCCEEEEcCCcH
Confidence 599999998854
No 222
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.85 E-value=7.3e-05 Score=77.42 Aligned_cols=75 Identities=23% Similarity=0.232 Sum_probs=53.9
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeE-EEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEec----CHHHhh
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEV-AVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFST----DVEKHV 76 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~----d~~~a~ 76 (480)
+||+|||+|.||...+..|.+. ++++| .++|+++++.+.+.+. +.+..-...+..+ |+++.+
T Consensus 21 ~rvgiIG~G~~g~~h~~~l~~~-~~~~lvav~d~~~~~~~~~a~~------------~~~~g~~~~~~~~~~~~~~~~ll 87 (444)
T 2ixa_A 21 VRIAFIAVGLRGQTHVENMARR-DDVEIVAFADPDPYMVGRAQEI------------LKKNGKKPAKVFGNGNDDYKNML 87 (444)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-TTEEEEEEECSCHHHHHHHHHH------------HHHTTCCCCEEECSSTTTHHHHT
T ss_pred ceEEEEecCHHHHHHHHHHHhC-CCcEEEEEEeCCHHHHHHHHHH------------HHhcCCCCCceeccCCCCHHHHh
Confidence 6899999999999999988874 57776 4789999988876531 0000000134556 888877
Q ss_pred c--cCcEEEEeccCC
Q 011641 77 S--EADIVFVSVNTP 89 (480)
Q Consensus 77 ~--~aDvVii~Vptp 89 (480)
+ +.|+|++|+|+.
T Consensus 88 ~~~~vD~V~i~tp~~ 102 (444)
T 2ixa_A 88 KDKNIDAVFVSSPWE 102 (444)
T ss_dssp TCTTCCEEEECCCGG
T ss_pred cCCCCCEEEEcCCcH
Confidence 6 589999998754
No 223
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=97.83 E-value=2.7e-05 Score=78.27 Aligned_cols=111 Identities=14% Similarity=0.118 Sum_probs=72.9
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc-cCc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS-EAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-~aD 80 (480)
++|+|+|+|.||..+|..|.+. |.+|+++|+++++++.+.+.. + .+.. +.++.+. +||
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~--GakVvv~D~~~~~l~~~a~~~-----------------g-a~~v-~~~~ll~~~~D 232 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTE--GAKLVVTDVNKAAVSAAVAEE-----------------G-ADAV-APNAIYGVTCD 232 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHH-----------------C-CEEC-CGGGTTTCCCS
T ss_pred CEEEEECchHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHc-----------------C-CEEE-ChHHHhccCCc
Confidence 5799999999999999999998 999999999999887765420 1 1222 2233333 899
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcCCCCceEEeeCCccc
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFL 159 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (480)
+++.|.... ..+.. .++ .++ .. +|.+++..|-+.++..++|++.+ +.+.|..+
T Consensus 233 Ivip~a~~~----------~I~~~----~~~----~lg-~~-iV~e~An~p~t~~ea~~~L~~~G------i~~~Pd~~ 285 (364)
T 1leh_A 233 IFAPCALGA----------VLNDF----TIP----QLK-AK-VIAGSADNQLKDPRHGKYLHELG------IVYAPDYV 285 (364)
T ss_dssp EEEECSCSC----------CBSTT----HHH----HCC-CS-EECCSCSCCBSSHHHHHHHHHHT------CEECCHHH
T ss_pred EeeccchHH----------HhCHH----HHH----hCC-Cc-EEEeCCCCCcccHHHHHHHHhCC------CEEeccee
Confidence 999885321 11211 122 232 33 45567777776656667777754 35677764
No 224
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.80 E-value=2.8e-05 Score=80.35 Aligned_cols=73 Identities=11% Similarity=0.163 Sum_probs=53.2
Q ss_pred cEEEEECCChhHH-HHHHHHHHcCCCCeE-EEEECCHHHHHHHHcCC-CCCcCCChHHHHhhhcCCCEEEecCHHHhhc-
Q 011641 2 VKICCIGAGYVGG-PTMAVIALKCPSIEV-AVVDISVSRINAWNSDQ-LPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS- 77 (480)
Q Consensus 2 mkI~VIGlG~~G~-~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~~~-~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~- 77 (480)
+||+|||+|.||. .++..|.+. +++++ .++|+++++.+.+.+.. .+. ..+...+|+++.++
T Consensus 84 irigiIG~G~~g~~~~~~~l~~~-~~~~lvav~d~~~~~~~~~a~~~g~~~--------------~~~~~~~~~~~ll~~ 148 (433)
T 1h6d_A 84 FGYAIVGLGKYALNQILPGFAGC-QHSRIEALVSGNAEKAKIVAAEYGVDP--------------RKIYDYSNFDKIAKD 148 (433)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTC-SSEEEEEEECSCHHHHHHHHHHTTCCG--------------GGEECSSSGGGGGGC
T ss_pred eEEEEECCcHHHHHHHHHHHhhC-CCcEEEEEEcCCHHHHHHHHHHhCCCc--------------ccccccCCHHHHhcC
Confidence 6899999999997 888888764 36775 58999999887765421 000 01345677888776
Q ss_pred -cCcEEEEeccCC
Q 011641 78 -EADIVFVSVNTP 89 (480)
Q Consensus 78 -~aDvVii~Vptp 89 (480)
++|+|++|+|+.
T Consensus 149 ~~vD~V~iatp~~ 161 (433)
T 1h6d_A 149 PKIDAVYIILPNS 161 (433)
T ss_dssp TTCCEEEECSCGG
T ss_pred CCCCEEEEcCCch
Confidence 789999998753
No 225
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.79 E-value=2.7e-05 Score=78.53 Aligned_cols=71 Identities=14% Similarity=0.199 Sum_probs=52.5
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
|||.|+|+|+||..+|..|++ .++|+++|++.++++++++....+. + .+.-..++.+.++++|+
T Consensus 17 mkilvlGaG~vG~~~~~~L~~---~~~v~~~~~~~~~~~~~~~~~~~~~---~----------d~~d~~~l~~~~~~~Dv 80 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD---EFDVYIGDVNNENLEKVKEFATPLK---V----------DASNFDKLVEVMKEFEL 80 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT---TSEEEEEESCHHHHHHHTTTSEEEE---C----------CTTCHHHHHHHHTTCSE
T ss_pred cEEEEECCCHHHHHHHHHHhc---CCCeEEEEcCHHHHHHHhccCCcEE---E----------ecCCHHHHHHHHhCCCE
Confidence 899999999999999999986 4899999999999998875321110 0 00001124456789999
Q ss_pred EEEeccC
Q 011641 82 VFVSVNT 88 (480)
Q Consensus 82 Vii~Vpt 88 (480)
||.|+|.
T Consensus 81 Vi~~~p~ 87 (365)
T 3abi_A 81 VIGALPG 87 (365)
T ss_dssp EEECCCG
T ss_pred EEEecCC
Confidence 9999884
No 226
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=97.78 E-value=8e-05 Score=74.24 Aligned_cols=71 Identities=14% Similarity=0.141 Sum_probs=54.5
Q ss_pred cEEEEECCC-hhHHHHHHHHHHcCCCCeE-EEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc--
Q 011641 2 VKICCIGAG-YVGGPTMAVIALKCPSIEV-AVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS-- 77 (480)
Q Consensus 2 mkI~VIGlG-~~G~~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (480)
+||+|||+| .+|...+..|.+..++.++ .++|+++++.+.+.+.. +...+.+|+++.++
T Consensus 19 irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~-----------------~~~~~~~~~~~ll~~~ 81 (340)
T 1zh8_A 19 IRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMV-----------------GNPAVFDSYEELLESG 81 (340)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHH-----------------SSCEEESCHHHHHHSS
T ss_pred eeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHh-----------------CCCcccCCHHHHhcCC
Confidence 689999999 8999999988864246776 57899999988766420 11356788998775
Q ss_pred cCcEEEEeccCC
Q 011641 78 EADIVFVSVNTP 89 (480)
Q Consensus 78 ~aDvVii~Vptp 89 (480)
+.|+|++|+|+.
T Consensus 82 ~vD~V~i~tp~~ 93 (340)
T 1zh8_A 82 LVDAVDLTLPVE 93 (340)
T ss_dssp CCSEEEECCCGG
T ss_pred CCCEEEEeCCch
Confidence 589999998754
No 227
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=97.77 E-value=3.9e-05 Score=77.74 Aligned_cols=97 Identities=22% Similarity=0.301 Sum_probs=67.2
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHc-CCCCCcCCChHHHHhhhcCCCEEE--ecCHHHhhcc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS-DQLPIYEPGLDGVVKQCRGKNLFF--STDVEKHVSE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~-~~~~~~e~~l~~~~~~~~~~~l~~--t~d~~~a~~~ 78 (480)
++|+|||+|.+|..+|..+... |.+|+++|+++++.+.+.+ ....+. ... ..++++.+++
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~--Ga~V~~~d~~~~~l~~~~~~~g~~~~---------------~~~~~~~~l~~~l~~ 231 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGM--GATVTVLDINIDKLRQLDAEFCGRIH---------------TRYSSAYELEGAVKR 231 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTTSSE---------------EEECCHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhcCCeeE---------------eccCCHHHHHHHHcC
Confidence 4799999999999999999887 8999999999998877764 211100 000 1234566789
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEec
Q 011641 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKS 127 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~S 127 (480)
+|+||.|++.|... .+.+ +.+...+.++++.+|++.|
T Consensus 232 aDvVi~~~~~p~~~-------t~~l-----i~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 232 ADLVIGAVLVPGAK-------APKL-----VSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CSEEEECCCCTTSC-------CCCC-----BCHHHHTTSCTTCEEEEGG
T ss_pred CCEEEECCCcCCCC-------Ccce-----ecHHHHhcCCCCcEEEEEe
Confidence 99999999766421 1111 1234456678888888765
No 228
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.76 E-value=3.2e-05 Score=74.63 Aligned_cols=74 Identities=19% Similarity=0.223 Sum_probs=50.5
Q ss_pred CcEEEEEC-CChhHHHHHHHHHHcCCCCeEEE-EECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhcc
Q 011641 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAV-VDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE 78 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~-~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (480)
||||+|+| +|.||..++..+.+. +++++.+ +|++..... |. .. .++.. . ..++.+++|+++.+.+
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~-~~~eLv~~~d~~~~~~~----G~-d~-----gel~g-~-~~gv~v~~dl~~ll~~ 73 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAA-PDATLVGALDRTGSPQL----GQ-DA-----GAFLG-K-QTGVALTDDIERVCAE 73 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHC-TTEEEEEEBCCTTCTTT----TS-BT-----TTTTT-C-CCSCBCBCCHHHHHHH
T ss_pred ccEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEEecCcccc----cc-cH-----HHHhC-C-CCCceecCCHHHHhcC
Confidence 58999999 899999999998875 5888776 688643210 10 00 01100 0 0145667899988889
Q ss_pred CcEEEEecc
Q 011641 79 ADIVFVSVN 87 (480)
Q Consensus 79 aDvVii~Vp 87 (480)
+|+||.+++
T Consensus 74 ~DVVIDfT~ 82 (272)
T 4f3y_A 74 ADYLIDFTL 82 (272)
T ss_dssp CSEEEECSC
T ss_pred CCEEEEcCC
Confidence 999999853
No 229
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=97.74 E-value=0.00024 Score=74.03 Aligned_cols=78 Identities=19% Similarity=0.214 Sum_probs=52.5
Q ss_pred cEEEEECCChhHHHHH--HHHHHc--C--CCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhh-cCCCEEEecCHHH
Q 011641 2 VKICCIGAGYVGGPTM--AVIALK--C--PSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQC-RGKNLFFSTDVEK 74 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA--~~La~~--~--~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~-~~~~l~~t~d~~~ 74 (480)
|||+|||.|.+|.+.. ..++.. . .+.++.++|+++++++....- +....... ..-+++.|+|.++
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~~--------~~~~~~~~~~~~~i~~t~d~~e 72 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYIL--------ARKYVEELNSPVKVVKTESLDE 72 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHHH--------HHHHHHHHTCCCEEEEESCHHH
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHHH--------HHHHHHHcCCCeEEEEeCCHHH
Confidence 8999999999986632 223321 1 135799999999987653320 11112111 1235788999999
Q ss_pred hhccCcEEEEecc
Q 011641 75 HVSEADIVFVSVN 87 (480)
Q Consensus 75 a~~~aDvVii~Vp 87 (480)
|+++||+||+++.
T Consensus 73 Al~gAD~Vi~~~g 85 (477)
T 3u95_A 73 AIEGADFIINTAY 85 (477)
T ss_dssp HHTTCSEEEECCC
T ss_pred HhCCCCEEEECcc
Confidence 9999999999974
No 230
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.73 E-value=0.00015 Score=74.14 Aligned_cols=90 Identities=18% Similarity=0.083 Sum_probs=65.3
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|||.|.+|..+|..+... |.+|+++|+++.+....... ++++ .+++++++.+|+
T Consensus 248 KTVgVIG~G~IGr~vA~~lraf--Ga~Viv~d~dp~~a~~A~~~-------------------G~~v-v~LeElL~~ADI 305 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGA--GARVKVTEVDPICALQAAMD-------------------GFEV-VTLDDAASTADI 305 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHT-------------------TCEE-CCHHHHGGGCSE
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCEEEEEeCCcchhhHHHhc-------------------Ccee-ccHHHHHhhCCE
Confidence 4799999999999999999887 89999999998764332211 1233 367888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCC
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVP 130 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~ 130 (480)
|+.|.+++. ..+ +.....++++.++++.+-.+
T Consensus 306 Vv~atgt~~---------lI~--------~e~l~~MK~GAILINvGRgd 337 (464)
T 3n58_A 306 VVTTTGNKD---------VIT--------IDHMRKMKDMCIVGNIGHFD 337 (464)
T ss_dssp EEECCSSSS---------SBC--------HHHHHHSCTTEEEEECSSST
T ss_pred EEECCCCcc---------ccC--------HHHHhcCCCCeEEEEcCCCC
Confidence 999866531 111 23345678999999866443
No 231
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=97.70 E-value=6.3e-05 Score=76.01 Aligned_cols=71 Identities=14% Similarity=0.179 Sum_probs=53.3
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.||+|||+| +|...+..+++...++++. ++|+++++.+++.+. -++...+|+++.+++.|
T Consensus 8 ~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~------------------~gv~~~~~~~~l~~~~D 68 (372)
T 4gmf_A 8 QRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHA------------------FGIPLYTSPEQITGMPD 68 (372)
T ss_dssp EEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHH------------------TTCCEESSGGGCCSCCS
T ss_pred CEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHH------------------hCCCEECCHHHHhcCCC
Confidence 479999999 6988887777642357766 579999998887652 12455688888888999
Q ss_pred EEEEeccCCCC
Q 011641 81 IVFVSVNTPTK 91 (480)
Q Consensus 81 vVii~Vptp~~ 91 (480)
+++||+|++.+
T Consensus 69 ~v~i~~p~~~h 79 (372)
T 4gmf_A 69 IACIVVRSTVA 79 (372)
T ss_dssp EEEECCC--CT
T ss_pred EEEEECCCccc
Confidence 99999998754
No 232
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=97.70 E-value=9.9e-05 Score=75.76 Aligned_cols=72 Identities=13% Similarity=0.193 Sum_probs=51.7
Q ss_pred cEEEEECCCh---hHHHHHHHHHHcCCCCeEE--EEECCHHHHHHHHcCC-CCCcCCChHHHHhhhcCCCEEEecCHHHh
Q 011641 2 VKICCIGAGY---VGGPTMAVIALKCPSIEVA--VVDISVSRINAWNSDQ-LPIYEPGLDGVVKQCRGKNLFFSTDVEKH 75 (480)
Q Consensus 2 mkI~VIGlG~---~G~~lA~~La~~~~G~~V~--~~D~~~~~v~~l~~~~-~~~~e~~l~~~~~~~~~~~l~~t~d~~~a 75 (480)
+||+|||+|. ||...+..+... ++++++ ++|+++++.+.+.+.. .+ ..++.+|+++.
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~-~~~~lva~v~d~~~~~a~~~a~~~g~~----------------~~~~~~~~~~l 100 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLD-DHYELVAGALSSTPEKAEASGRELGLD----------------PSRVYSDFKEM 100 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHT-SCEEEEEEECCSSHHHHHHHHHHHTCC----------------GGGBCSCHHHH
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhC-CCcEEEEEEeCCCHHHHHHHHHHcCCC----------------cccccCCHHHH
Confidence 4899999998 999988888765 357765 5799999988776420 00 01345777777
Q ss_pred hcc-------CcEEEEeccCCC
Q 011641 76 VSE-------ADIVFVSVNTPT 90 (480)
Q Consensus 76 ~~~-------aDvVii~Vptp~ 90 (480)
+++ .|+|+||+|+..
T Consensus 101 l~~~~~~~~~vD~V~I~tp~~~ 122 (417)
T 3v5n_A 101 AIREAKLKNGIEAVAIVTPNHV 122 (417)
T ss_dssp HHHHHHCTTCCSEEEECSCTTS
T ss_pred HhcccccCCCCcEEEECCCcHH
Confidence 654 899999988653
No 233
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=97.68 E-value=0.00022 Score=71.75 Aligned_cols=69 Identities=4% Similarity=0.044 Sum_probs=51.7
Q ss_pred cEEEEECCChhHH-HHHHHHHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhcc-
Q 011641 2 VKICCIGAGYVGG-PTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE- 78 (480)
Q Consensus 2 mkI~VIGlG~~G~-~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~- 78 (480)
+||||||+|.+|. .++..+... +.+|+ ++|+++++.+.+.+.. +..++.+|+++.+++
T Consensus 27 irvgiiG~G~~~~~~~~~~~~~~--~~~lvav~d~~~~~a~~~a~~~-----------------~~~~~~~~~~~ll~~~ 87 (361)
T 3u3x_A 27 LRFAAVGLNHNHIYGQVNCLLRA--GARLAGFHEKDDALAAEFSAVY-----------------ADARRIATAEEILEDE 87 (361)
T ss_dssp CEEEEECCCSTTHHHHHHHHHHT--TCEEEEEECSCHHHHHHHHHHS-----------------SSCCEESCHHHHHTCT
T ss_pred cEEEEECcCHHHHHHHHHHhhcC--CcEEEEEEcCCHHHHHHHHHHc-----------------CCCcccCCHHHHhcCC
Confidence 5899999999995 466666654 88855 7899999988776521 123567888887764
Q ss_pred -CcEEEEeccCC
Q 011641 79 -ADIVFVSVNTP 89 (480)
Q Consensus 79 -aDvVii~Vptp 89 (480)
.|+|+||+|+.
T Consensus 88 ~vD~V~I~tp~~ 99 (361)
T 3u3x_A 88 NIGLIVSAAVSS 99 (361)
T ss_dssp TCCEEEECCCHH
T ss_pred CCCEEEEeCChH
Confidence 89999998753
No 234
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=97.68 E-value=5.3e-05 Score=73.36 Aligned_cols=98 Identities=22% Similarity=0.255 Sum_probs=66.2
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCC-eEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+++.|+|+|.+|.+++..|++. |. +|++++|++++.+.+.... ......++.+++.++|
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~--G~~~v~v~~R~~~~a~~la~~~------------------~~~~~~~~~~~~~~aD 177 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKI--VRPTLTVANRTMSRFNNWSLNI------------------NKINLSHAESHLDEFD 177 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT--CCSCCEEECSCGGGGTTCCSCC------------------EEECHHHHHHTGGGCS
T ss_pred CEEEEECCcHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHhc------------------ccccHhhHHHHhcCCC
Confidence 4799999999999999999998 87 8999999998876655320 1111234555678999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcch
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKT 133 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
+||-|+|.....+ .+ ..+ -...++++.+|++.++.|..|
T Consensus 178 iVInaTp~Gm~~~-------~~-----~~l--~~~~l~~~~~V~D~vY~P~~T 216 (277)
T 3don_A 178 IIINTTPAGMNGN-------TD-----SVI--SLNRLASHTLVSDIVYNPYKT 216 (277)
T ss_dssp EEEECCC--------------C-----CSS--CCTTCCSSCEEEESCCSSSSC
T ss_pred EEEECccCCCCCC-------Cc-----CCC--CHHHcCCCCEEEEecCCCCCC
Confidence 9999977532110 00 000 024567889999998886655
No 235
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=97.68 E-value=5.8e-05 Score=76.99 Aligned_cols=72 Identities=14% Similarity=0.170 Sum_probs=52.6
Q ss_pred cEEEEECCCh---hHHHHHHHHHHcCCCCeEE--EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhh
Q 011641 2 VKICCIGAGY---VGGPTMAVIALKCPSIEVA--VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV 76 (480)
Q Consensus 2 mkI~VIGlG~---~G~~lA~~La~~~~G~~V~--~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~ 76 (480)
+||||||+|. ||...+..+... ++++++ ++|+++++.+.+.+.. ++ ...++.+|+++.+
T Consensus 13 ~rvgiiG~G~~~~ig~~h~~~~~~~-~~~~lva~v~d~~~~~a~~~a~~~------g~---------~~~~~~~~~~~ll 76 (398)
T 3dty_A 13 IRWAMVGGGSQSQIGYIHRCAALRD-NTFVLVAGAFDIDPIRGSAFGEQL------GV---------DSERCYADYLSMF 76 (398)
T ss_dssp EEEEEEECCTTCSSHHHHHHHHHGG-GSEEEEEEECCSSHHHHHHHHHHT------TC---------CGGGBCSSHHHHH
T ss_pred ceEEEEcCCccchhHHHHHHHHhhC-CCeEEEEEEeCCCHHHHHHHHHHh------CC---------CcceeeCCHHHHH
Confidence 4899999999 999999888765 357876 4799999988876421 00 0013457777766
Q ss_pred cc-------CcEEEEeccCC
Q 011641 77 SE-------ADIVFVSVNTP 89 (480)
Q Consensus 77 ~~-------aDvVii~Vptp 89 (480)
++ .|+|+||+|+.
T Consensus 77 ~~~~~~~~~vD~V~i~tp~~ 96 (398)
T 3dty_A 77 EQEARRADGIQAVSIATPNG 96 (398)
T ss_dssp HHHTTCTTCCSEEEEESCGG
T ss_pred hcccccCCCCCEEEECCCcH
Confidence 54 89999998864
No 236
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.67 E-value=5.2e-05 Score=75.07 Aligned_cols=65 Identities=20% Similarity=0.493 Sum_probs=48.5
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeE-EEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEV-AVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+||+|||+|.||..++..+.+. ++.++ .++|+++++ .+. -++..++|+++.+.++|
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~-~~~elvav~d~~~~~--~~~--------------------~gv~~~~d~~~ll~~~D 60 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQ-PDMDLVGIFSRRATL--DTK--------------------TPVFDVADVDKHADDVD 60 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTC-SSEEEEEEEESSSCC--SSS--------------------SCEEEGGGGGGTTTTCS
T ss_pred CEEEEEeecHHHHHHHHHHhcC-CCCEEEEEEcCCHHH--hhc--------------------CCCceeCCHHHHhcCCC
Confidence 6899999999999999998875 46675 578987543 111 02456677777667899
Q ss_pred EEEEeccCC
Q 011641 81 IVFVSVNTP 89 (480)
Q Consensus 81 vVii~Vptp 89 (480)
+|++|+|+.
T Consensus 61 vViiatp~~ 69 (320)
T 1f06_A 61 VLFLCMGSA 69 (320)
T ss_dssp EEEECSCTT
T ss_pred EEEEcCCcH
Confidence 999998753
No 237
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.67 E-value=8.4e-05 Score=74.74 Aligned_cols=67 Identities=15% Similarity=0.186 Sum_probs=49.4
Q ss_pred cEEEEECCChhHHH-HHHHHHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhcc-
Q 011641 2 VKICCIGAGYVGGP-TMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE- 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~- 78 (480)
+||+|||+|.||.. .+..+.+. ++++|+ ++|++++++ .+. -+..+..+|+++.+++
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~-~~~~l~av~d~~~~~~---~~~-----------------~~~~~~~~~~~~ll~~~ 64 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTN-PHFELYKIVERSKELS---KER-----------------YPQASIVRSFKELTEDP 64 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHC-TTEEEEEEECSSCCGG---GTT-----------------CTTSEEESCSHHHHTCT
T ss_pred eEEEEECCCHHHHHHHHHHHhhC-CCeEEEEEEcCCHHHH---HHh-----------------CCCCceECCHHHHhcCC
Confidence 58999999999997 67777664 578875 679987652 211 0235677888888765
Q ss_pred -CcEEEEeccCC
Q 011641 79 -ADIVFVSVNTP 89 (480)
Q Consensus 79 -aDvVii~Vptp 89 (480)
.|+|++|+|+.
T Consensus 65 ~vD~V~i~tp~~ 76 (362)
T 3fhl_A 65 EIDLIVVNTPDN 76 (362)
T ss_dssp TCCEEEECSCGG
T ss_pred CCCEEEEeCChH
Confidence 89999998854
No 238
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.65 E-value=6.4e-05 Score=71.85 Aligned_cols=67 Identities=16% Similarity=0.302 Sum_probs=53.7
Q ss_pred EEEEECCChhHHHHHHHHHHcCCCC-eEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 3 KICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 3 kI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
+|+|||+|.||.+++..|++. |. +|++++|++++.+.+.+.. ......++.++++++|+
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~--G~~~I~v~nR~~~ka~~la~~~------------------~~~~~~~~~~~~~~aDi 169 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQM--GVKDIWVVNRTIERAKALDFPV------------------KIFSLDQLDEVVKKAKS 169 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--TCCCEEEEESCHHHHHTCCSSC------------------EEEEGGGHHHHHHTCSE
T ss_pred eEEEECcHHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHc------------------ccCCHHHHHhhhcCCCE
Confidence 689999999999999999998 87 8999999999988776421 11223456667889999
Q ss_pred EEEeccCC
Q 011641 82 VFVSVNTP 89 (480)
Q Consensus 82 Vii~Vptp 89 (480)
||.|+|..
T Consensus 170 VInatp~g 177 (253)
T 3u62_A 170 LFNTTSVG 177 (253)
T ss_dssp EEECSSTT
T ss_pred EEECCCCC
Confidence 99998753
No 239
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=97.63 E-value=0.00029 Score=71.78 Aligned_cols=90 Identities=19% Similarity=0.166 Sum_probs=64.5
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|+|+|+|.+|..+|..+... |.+|+++|+++.+....... +... .+++++++.+|+
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~--Ga~Viv~D~dp~ra~~A~~~-------------------G~~v-~~Leeal~~ADI 278 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAM--GSIVYVTEIDPICALQACMD-------------------GFRL-VKLNEVIRQVDI 278 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT-------------------TCEE-CCHHHHTTTCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHHC--CCEEEEEeCChhhhHHHHHc-------------------CCEe-ccHHHHHhcCCE
Confidence 4799999999999999999887 89999999998765432221 1222 467888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCC
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVP 130 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~ 130 (480)
|++|..++. ..+ ......++++.+|++.+-.+
T Consensus 279 Vi~atgt~~---------lI~--------~e~l~~MK~gailINvgrg~ 310 (435)
T 3gvp_A 279 VITCTGNKN---------VVT--------REHLDRMKNSCIVCNMGHSN 310 (435)
T ss_dssp EEECSSCSC---------SBC--------HHHHHHSCTTEEEEECSSTT
T ss_pred EEECCCCcc---------cCC--------HHHHHhcCCCcEEEEecCCC
Confidence 999844331 111 23345678899998865443
No 240
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=97.61 E-value=0.00027 Score=72.62 Aligned_cols=87 Identities=18% Similarity=0.212 Sum_probs=58.2
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeE-EEEECCHHHHHHHHc---CC-CCCcC-CChHHHHhhhcCCCEEEecCHHHh
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEV-AVVDISVSRINAWNS---DQ-LPIYE-PGLDGVVKQCRGKNLFFSTDVEKH 75 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~---~~-~~~~e-~~l~~~~~~~~~~~l~~t~d~~~a 75 (480)
+||||||+|.||..++..+.+. ++.+| .++|+++++.+...+ |. ..+.. ....++-.....+...+++|+++.
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~-~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~eeL 102 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARM-QGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDLI 102 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTS-SSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHHH
T ss_pred eEEEEECChHHHHHHHHHHhhC-CCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHHH
Confidence 5899999999999999888764 57765 468999998877643 20 11100 011111111123457889999998
Q ss_pred hc--cCcEEEEeccCC
Q 011641 76 VS--EADIVFVSVNTP 89 (480)
Q Consensus 76 ~~--~aDvVii~Vptp 89 (480)
++ +.|+|++|+|+|
T Consensus 103 L~d~dIDaVviaTp~p 118 (446)
T 3upl_A 103 LSNPLIDVIIDATGIP 118 (446)
T ss_dssp HTCTTCCEEEECSCCH
T ss_pred hcCCCCCEEEEcCCCh
Confidence 76 589999998754
No 241
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=97.60 E-value=0.00036 Score=69.37 Aligned_cols=115 Identities=16% Similarity=0.280 Sum_probs=73.5
Q ss_pred cEEEEEC-CChhHHHHHHHHHHcCCCC--e-----EEEEECCH--HHHH----HHHcCCCCCcCCChHHHHhhhcCCCEE
Q 011641 2 VKICCIG-AGYVGGPTMAVIALKCPSI--E-----VAVVDISV--SRIN----AWNSDQLPIYEPGLDGVVKQCRGKNLF 67 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~--~-----V~~~D~~~--~~v~----~l~~~~~~~~e~~l~~~~~~~~~~~l~ 67 (480)
|||+|+| +|.+|.++|..|+.. |. + +.++|+++ ++++ .|+....++. ..+.
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~--~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~-------------~~~~ 68 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNG--SVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL-------------KDVI 68 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTT--TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE-------------EEEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhC--CCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc-------------CCEE
Confidence 6999999 899999999999976 44 5 99999974 2333 2332211210 2356
Q ss_pred EecCHHHhhccCcEEEEeccCCCCCCCCCCCCCCC-----hHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHH
Q 011641 68 FSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARVIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 68 ~t~d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
.+++..+++++||+||++-..|.... ..+.| .+.+++..+.+.++.+++..+++ -|.|..+.-.
T Consensus 69 ~~~~~~~~~~daDvVvitAg~prkpG----~tR~dll~~N~~i~~~i~~~i~~~~~~~~~viv-vsNPvd~~t~ 137 (333)
T 5mdh_A 69 ATDKEEIAFKDLDVAILVGSMPRRDG----MERKDLLKANVKIFKCQGAALDKYAKKSVKVIV-VGNPANTNCL 137 (333)
T ss_dssp EESCHHHHTTTCSEEEECCSCCCCTT----CCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEE-CSSSHHHHHH
T ss_pred EcCCcHHHhCCCCEEEEeCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEE-cCCchHHHHH
Confidence 67777777999999999976654321 11333 34456666677777665543433 3567665433
No 242
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=97.59 E-value=0.00066 Score=67.62 Aligned_cols=115 Identities=22% Similarity=0.294 Sum_probs=73.5
Q ss_pred EEEEECC-ChhHHHHHHHHHHcC-CC----CeEEEEECCHHH--HH----HHHcCCCCCcCCChHHHHhhhcCCCEEEec
Q 011641 3 KICCIGA-GYVGGPTMAVIALKC-PS----IEVAVVDISVSR--IN----AWNSDQLPIYEPGLDGVVKQCRGKNLFFST 70 (480)
Q Consensus 3 kI~VIGl-G~~G~~lA~~La~~~-~G----~~V~~~D~~~~~--v~----~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~ 70 (480)
||+|+|+ |.+|.+++..|+... -| .++.++|+++.. ++ .|.....+. ......++
T Consensus 26 KVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~-------------~~~~~~~~ 92 (345)
T 4h7p_A 26 KVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPL-------------LDKVVVTA 92 (345)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTT-------------EEEEEEES
T ss_pred EEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccC-------------CCcEEEcC
Confidence 8999996 999999999999751 01 279999998642 22 222221111 12356778
Q ss_pred CHHHhhccCcEEEEeccCCCCCCCCCCCCCCC-----hHHHHHHHHHHHhhCCCCcEEEEecCCCcchHH
Q 011641 71 DVEKHVSEADIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARVIADVSKSDKIVVEKSTVPVKTAE 135 (480)
Q Consensus 71 d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~ 135 (480)
+..+++++||+||++-..|..+.. .+.| .+-+++..+.|.++..++.+|+. -|.|..+.-
T Consensus 93 ~~~~a~~~advVvi~aG~prkpGm----tR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlv-vsNPvd~~~ 157 (345)
T 4h7p_A 93 DPRVAFDGVAIAIMCGAFPRKAGM----ERKDLLEMNARIFKEQGEAIAAVAASDCRVVV-VGNPANTNA 157 (345)
T ss_dssp CHHHHTTTCSEEEECCCCCCCTTC----CHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEE-CSSSHHHHH
T ss_pred ChHHHhCCCCEEEECCCCCCCCCC----CHHHHHHHhHHHHHHHHHHHHhhccCceEEEE-eCCCcchHH
Confidence 888889999999999776654311 1222 33445556667777667776544 356765543
No 243
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.58 E-value=0.00013 Score=73.53 Aligned_cols=99 Identities=17% Similarity=0.284 Sum_probs=64.5
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHc-CCCCCcCCChHHHHhhhcCCCEEE--ecCHHHhhcc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS-DQLPIYEPGLDGVVKQCRGKNLFF--STDVEKHVSE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~-~~~~~~e~~l~~~~~~~~~~~l~~--t~d~~~a~~~ 78 (480)
++|+|+|+|.+|..+|..+... |++|+++|+++++.+.+.+ ....+. ... ..+.++.+++
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~--Ga~V~~~d~~~~~~~~~~~~~g~~~~---------------~~~~~~~~l~~~~~~ 229 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGM--GAQVTILDVNHKRLQYLDDVFGGRVI---------------TLTATEANIKKSVQH 229 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTTSEE---------------EEECCHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHhcCceEE---------------EecCCHHHHHHHHhC
Confidence 5899999999999999999988 8999999999998877654 211100 001 1234556788
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCC
Q 011641 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTV 129 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv 129 (480)
+|+||.|++.+... .+. -+.+...+.++++.+|++.|..
T Consensus 230 ~DvVi~~~g~~~~~-------~~~-----li~~~~l~~mk~gg~iV~v~~~ 268 (369)
T 2eez_A 230 ADLLIGAVLVPGAK-------APK-----LVTRDMLSLMKEGAVIVDVAVD 268 (369)
T ss_dssp CSEEEECCC--------------C-----CSCHHHHTTSCTTCEEEECC--
T ss_pred CCEEEECCCCCccc-------cch-----hHHHHHHHhhcCCCEEEEEecC
Confidence 99999998865210 000 0123445667788888876643
No 244
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.58 E-value=0.00013 Score=74.61 Aligned_cols=71 Identities=14% Similarity=0.149 Sum_probs=52.8
Q ss_pred cEEEEECCChhHHHHHHHHHHcC-------CCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHH
Q 011641 2 VKICCIGAGYVGGPTMAVIALKC-------PSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVE 73 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~-------~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~ 73 (480)
+||||||+|.||...+..|.+.. .+.+|+ ++|+++++.+++.+.. +..++.+|++
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~-----------------~~~~~y~d~~ 89 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKL-----------------GAEKAYGDWR 89 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHH-----------------TCSEEESSHH
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHc-----------------CCCeEECCHH
Confidence 48999999999999888887630 123544 6899999988876520 1235678899
Q ss_pred Hhhc--cCcEEEEeccCC
Q 011641 74 KHVS--EADIVFVSVNTP 89 (480)
Q Consensus 74 ~a~~--~aDvVii~Vptp 89 (480)
+.++ +.|+|+||+|+.
T Consensus 90 ~ll~~~~vD~V~I~tp~~ 107 (412)
T 4gqa_A 90 ELVNDPQVDVVDITSPNH 107 (412)
T ss_dssp HHHHCTTCCEEEECSCGG
T ss_pred HHhcCCCCCEEEECCCcH
Confidence 8775 689999998754
No 245
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.56 E-value=7.5e-05 Score=76.55 Aligned_cols=71 Identities=13% Similarity=0.289 Sum_probs=54.2
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCc--CCChHHHHhhhcCCCEEEecCHHHh-hcc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIY--EPGLDGVVKQCRGKNLFFSTDVEKH-VSE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~--e~~l~~~~~~~~~~~l~~t~d~~~a-~~~ 78 (480)
|+|.|+|+|.+|..+|..|.+. |++|+++|.|+++++.+++...++. +..-.+. ++++ +.+
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~--g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~--------------L~~agi~~ 68 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS--GVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDL--------------LESAGAAK 68 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHH--------------HHHTTTTT
T ss_pred CeEEEECCCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHH--------------HHhcCCCc
Confidence 6799999999999999999998 9999999999999999886433332 2111111 1222 578
Q ss_pred CcEEEEeccC
Q 011641 79 ADIVFVSVNT 88 (480)
Q Consensus 79 aDvVii~Vpt 88 (480)
||+||+|++.
T Consensus 69 A~~viv~~~~ 78 (413)
T 3l9w_A 69 AEVLINAIDD 78 (413)
T ss_dssp CSEEEECCSS
T ss_pred cCEEEECCCC
Confidence 9999999764
No 246
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=97.56 E-value=0.00015 Score=71.01 Aligned_cols=110 Identities=16% Similarity=0.119 Sum_probs=77.8
Q ss_pred CeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceEEec
Q 011641 325 KKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVSVVW 404 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (480)
+||+++||.. ....+++.|.++|++|.+||......+ .+ ...+...++
T Consensus 6 ~kIgfIGLG~----------MG~~mA~~L~~~G~~V~v~dr~~~~~~---~l-------------------~~~G~~~~~ 53 (297)
T 4gbj_A 6 EKIAFLGLGN----------LGTPIAEILLEAGYELVVWNRTASKAE---PL-------------------TKLGATVVE 53 (297)
T ss_dssp CEEEEECCST----------THHHHHHHHHHTTCEEEEC-------C---TT-------------------TTTTCEECS
T ss_pred CcEEEEecHH----------HHHHHHHHHHHCCCeEEEEeCCHHHHH---HH-------------------HHcCCeEeC
Confidence 4899999965 889999999999999999997544321 11 113567789
Q ss_pred CHHhhcccccEEEEEecCcc-cccccHHHHHHhcCCCCEEEEcCCCCCh------hhhhhcCcEEEEec
Q 011641 405 DAYEATKDAHGVCILTEWDE-FKTLDYQRIYDNMQKPAFVFDGRNVVDA------NKLREIGFIVYSIG 466 (480)
Q Consensus 405 ~~~~a~~~ad~vvi~t~~~~-~~~~~~~~~~~~~~~~~~viD~~~~~~~------~~~~~~g~~y~~iG 466 (480)
++.|+++++|+|+++..-+. ..+.-...+...+++..+|||+..+... +.+.+.|+.|..-+
T Consensus 54 s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldap 122 (297)
T 4gbj_A 54 NAIDAITPGGIVFSVLADDAAVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAP 122 (297)
T ss_dssp SGGGGCCTTCEEEECCSSHHHHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECC
T ss_pred CHHHHHhcCCceeeeccchhhHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCC
Confidence 99999999999999988754 2222223466677777799999998753 34456788887654
No 247
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.55 E-value=0.00019 Score=62.64 Aligned_cols=40 Identities=13% Similarity=0.114 Sum_probs=34.7
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECC-HHHHHHHH
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDIS-VSRINAWN 43 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~-~~~v~~l~ 43 (480)
++|.|+|+|.+|..++..|.+. |++|+++|++ +++++.+.
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~--g~~V~vid~~~~~~~~~~~ 44 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQR--GQNVTVISNLPEDDIKQLE 44 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT--TCCEEEEECCCHHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHC--CCCEEEEECCChHHHHHHH
Confidence 4699999999999999999998 9999999998 56655554
No 248
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=97.54 E-value=0.00028 Score=73.69 Aligned_cols=73 Identities=15% Similarity=0.241 Sum_probs=55.0
Q ss_pred cEEEEECC----ChhHHHHHHHHHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhh
Q 011641 2 VKICCIGA----GYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV 76 (480)
Q Consensus 2 mkI~VIGl----G~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~ 76 (480)
+||+|||+ |.||..++..|.+..++++|+ ++|+++++.+.+.+.. +. ...++.+|+++.+
T Consensus 40 irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~------g~---------~~~~~~~d~~ell 104 (479)
T 2nvw_A 40 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQL------QL---------KHATGFDSLESFA 104 (479)
T ss_dssp EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHT------TC---------TTCEEESCHHHHH
T ss_pred CEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHc------CC---------CcceeeCCHHHHh
Confidence 68999999 999999999998742477764 7899999888776421 00 1135678888877
Q ss_pred c--cCcEEEEeccCC
Q 011641 77 S--EADIVFVSVNTP 89 (480)
Q Consensus 77 ~--~aDvVii~Vptp 89 (480)
+ +.|+|+||+|+.
T Consensus 105 ~~~~vD~V~I~tp~~ 119 (479)
T 2nvw_A 105 QYKDIDMIVVSVKVP 119 (479)
T ss_dssp HCTTCSEEEECSCHH
T ss_pred cCCCCCEEEEcCCcH
Confidence 5 689999998753
No 249
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.54 E-value=0.00018 Score=70.86 Aligned_cols=69 Identities=19% Similarity=0.127 Sum_probs=50.6
Q ss_pred CcEEEEECC-ChhHHHHHHHHHHcCCCCe-EEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhh--
Q 011641 1 MVKICCIGA-GYVGGPTMAVIALKCPSIE-VAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV-- 76 (480)
Q Consensus 1 ~mkI~VIGl-G~~G~~lA~~La~~~~G~~-V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~-- 76 (480)
|+||+|||+ |++|...+..+... +.+ |.++|+++++. ...+. -+..++.+|+++.+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~--~~~lvav~d~~~~~~-~~~~~-----------------~~~~~~~~~~~~ll~~ 62 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEV--GGVLVASLDPATNVG-LVDSF-----------------FPEAEFFTEPEAFEAY 62 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHT--TCEEEEEECSSCCCG-GGGGT-----------------CTTCEEESCHHHHHHH
T ss_pred ceEEEEECCChHHHHHHHHHHHhC--CCEEEEEEcCCHHHH-HHHhh-----------------CCCCceeCCHHHHHHH
Confidence 789999999 79999999999986 666 45789987752 12111 02356677877765
Q ss_pred --------ccCcEEEEeccCC
Q 011641 77 --------SEADIVFVSVNTP 89 (480)
Q Consensus 77 --------~~aDvVii~Vptp 89 (480)
.+.|+|+||+|+.
T Consensus 63 ~~~l~~~~~~vD~V~I~tP~~ 83 (312)
T 3o9z_A 63 LEDLRDRGEGVDYLSIASPNH 83 (312)
T ss_dssp HHHHHHTTCCCSEEEECSCGG
T ss_pred hhhhcccCCCCcEEEECCCch
Confidence 5789999998754
No 250
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.52 E-value=0.00019 Score=70.92 Aligned_cols=69 Identities=26% Similarity=0.210 Sum_probs=50.2
Q ss_pred CcEEEEECC-ChhHHHHHHHHHHcCCCCe-EEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhh--
Q 011641 1 MVKICCIGA-GYVGGPTMAVIALKCPSIE-VAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV-- 76 (480)
Q Consensus 1 ~mkI~VIGl-G~~G~~lA~~La~~~~G~~-V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~-- 76 (480)
|+||||||+ |++|...+..|... +.+ |.++|+++++. .+.+. -...++.+|+++.+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~--~~~lvav~d~~~~~~-~~~~~-----------------~~~~~~~~~~~~ll~~ 62 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDT--GNCLVSAYDINDSVG-IIDSI-----------------SPQSEFFTEFEFFLDH 62 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHT--TCEEEEEECSSCCCG-GGGGT-----------------CTTCEEESSHHHHHHH
T ss_pred ceEEEEECCCcHHHHHHHHHHHhC--CCEEEEEEcCCHHHH-HHHhh-----------------CCCCcEECCHHHHHHh
Confidence 789999999 79999999999886 666 45689887652 22211 02346677877755
Q ss_pred ---------ccCcEEEEeccCC
Q 011641 77 ---------SEADIVFVSVNTP 89 (480)
Q Consensus 77 ---------~~aDvVii~Vptp 89 (480)
.+.|+|+||+|+.
T Consensus 63 ~~~l~~~~~~~vD~V~I~tP~~ 84 (318)
T 3oa2_A 63 ASNLKRDSATALDYVSICSPNY 84 (318)
T ss_dssp HHHHTTSTTTSCCEEEECSCGG
T ss_pred hhhhhhccCCCCcEEEECCCcH
Confidence 4689999998754
No 251
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=97.52 E-value=0.0013 Score=64.83 Aligned_cols=117 Identities=22% Similarity=0.330 Sum_probs=70.1
Q ss_pred cEEEEECC-ChhHHHHHHHHHHcCCCCeEEEEEC--CHHHHHH----HHcCCCCCcCCChHHHHhhhcCCCEEEecC-HH
Q 011641 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDI--SVSRINA----WNSDQLPIYEPGLDGVVKQCRGKNLFFSTD-VE 73 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~--~~~~v~~----l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d-~~ 73 (480)
|||+|+|+ |.+|.+++..|+.++...++.++|+ ++++.+. +.... ++.. ....++.++| ..
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~-~~~~----------~~~~i~~~~d~l~ 69 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDAL-AGTR----------SDANIYVESDENL 69 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHH-TTSC----------CCCEEEEEETTCG
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhH-HhcC----------CCeEEEeCCcchH
Confidence 79999999 9999999999988621247999999 8765543 22110 1100 0113444343 46
Q ss_pred HhhccCcEEEEeccCCCCCCCCCCCCCCC-----hHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHH
Q 011641 74 KHVSEADIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARVIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 74 ~a~~~aDvVii~Vptp~~~~~~~~~~~~d-----~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
+++++||+||++...|... + ....| ...+++.++.+.++. +.+|++ +|.|..+.-.
T Consensus 70 ~al~gaD~Vi~~Ag~~~~~-g---~~r~dl~~~N~~i~~~i~~~i~~~~--~~~vlv-~SNPv~~~t~ 130 (313)
T 1hye_A 70 RIIDESDVVIITSGVPRKE-G---MSRMDLAKTNAKIVGKYAKKIAEIC--DTKIFV-ITNPVDVMTY 130 (313)
T ss_dssp GGGTTCSEEEECCSCCCCT-T---CCHHHHHHHHHHHHHHHHHHHHHHC--CCEEEE-CSSSHHHHHH
T ss_pred HHhCCCCEEEECCCCCCCC-C---CcHHHHHHHHHHHHHHHHHHHHHhC--CeEEEE-ecCcHHHHHH
Confidence 6799999999998765432 1 01112 233345555555555 445544 5688776543
No 252
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=97.52 E-value=0.00023 Score=72.62 Aligned_cols=41 Identities=22% Similarity=0.198 Sum_probs=36.2
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS 44 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~ 44 (480)
.+|+|||+|.+|...+..+... |.+|+++|+++++.+.+.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~--Ga~V~v~D~~~~~~~~~~~ 213 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSL--GAIVRAFDTRPEVKEQVQS 213 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCGGGHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHH
Confidence 4799999999999999998887 8999999999988777654
No 253
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=97.52 E-value=0.0013 Score=64.08 Aligned_cols=119 Identities=13% Similarity=0.093 Sum_probs=81.8
Q ss_pred HHHHHHHhcCcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCC
Q 011641 311 VNRVVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQ 390 (480)
Q Consensus 311 ~~~~~~~l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (480)
+..++..++..+.+++|+|+|+. .-+..+++.|...|++|.+|||.....+....++
T Consensus 142 ~~~~l~~~~~~l~g~~v~IiG~G----------~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g------------- 198 (293)
T 3d4o_A 142 IMMAIQHTDFTIHGANVAVLGLG----------RVGMSVARKFAALGAKVKVGARESDLLARIAEMG------------- 198 (293)
T ss_dssp HHHHHHHCSSCSTTCEEEEECCS----------HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT-------------
T ss_pred HHHHHHhcCCCCCCCEEEEEeeC----------HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCC-------------
Confidence 33333334457889999999974 4789999999999999999999765432222221
Q ss_pred CCCcccccceEE--ecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCC---CCChhhhhhcCcEEEEe
Q 011641 391 PMSPTMVKQVSV--VWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRN---VVDANKLREIGFIVYSI 465 (480)
Q Consensus 391 ~~~~~~~~~~~~--~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~---~~~~~~~~~~g~~y~~i 465 (480)
..+ ..++++.++++|+|+++++...+ +. ...+.|++..++||.-+ -.+.+..+..|..++.+
T Consensus 199 ---------~~~~~~~~l~~~l~~aDvVi~~~p~~~i---~~-~~l~~mk~~~~lin~ar~~~~~~~~~a~~~Gv~~~~~ 265 (293)
T 3d4o_A 199 ---------MEPFHISKAAQELRDVDVCINTIPALVV---TA-NVLAEMPSHTFVIDLASKPGGTDFRYAEKRGIKALLV 265 (293)
T ss_dssp ---------SEEEEGGGHHHHTTTCSEEEECCSSCCB---CH-HHHHHSCTTCEEEECSSTTCSBCHHHHHHHTCEEEEC
T ss_pred ---------CeecChhhHHHHhcCCCEEEECCChHHh---CH-HHHHhcCCCCEEEEecCCCCCCCHHHHHHCCCEEEEC
Confidence 122 24678889999999999987443 33 34567887789999875 23334555678877644
No 254
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=97.50 E-value=0.00085 Score=68.67 Aligned_cols=78 Identities=17% Similarity=0.110 Sum_probs=51.6
Q ss_pred CcEEEEECCChhHHHH--HHHHHH--cC-CCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHh
Q 011641 1 MVKICCIGAGYVGGPT--MAVIAL--KC-PSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKH 75 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~l--A~~La~--~~-~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a 75 (480)
+|||+|||+|.+ .+. +..|+. .. ++.+|.++|+++++++.... +...+... .-+++.++|+.++
T Consensus 2 ~~KI~IIGaG~v-~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~~~~---------~~~~~~~~-~~~v~~t~d~~~a 70 (417)
T 1up7_A 2 HMRIAVIGGGSS-YTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVD---------FVKRLVKD-RFKVLISDTFEGA 70 (417)
T ss_dssp CCEEEEETTTCT-THHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHH---------HHHHHHTT-SSEEEECSSHHHH
T ss_pred CCEEEEECCCHH-HHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHHHHH---------HHHHHhhC-CeEEEEeCCHHHH
Confidence 589999999996 332 223454 31 26789999999998775321 10101000 1246777898788
Q ss_pred hccCcEEEEeccCC
Q 011641 76 VSEADIVFVSVNTP 89 (480)
Q Consensus 76 ~~~aDvVii~Vptp 89 (480)
+++||+||++...+
T Consensus 71 l~~AD~Viitagvg 84 (417)
T 1up7_A 71 VVDAKYVIFQFRPG 84 (417)
T ss_dssp HTTCSEEEECCCTT
T ss_pred hCCCCEEEEcCCCC
Confidence 99999999998654
No 255
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.50 E-value=0.00041 Score=69.30 Aligned_cols=71 Identities=15% Similarity=0.333 Sum_probs=47.8
Q ss_pred CcEEEEECCChhHH-HHHHHHHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhcc
Q 011641 1 MVKICCIGAGYVGG-PTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE 78 (480)
Q Consensus 1 ~mkI~VIGlG~~G~-~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (480)
|+||+|||+|.||. ..+..+... ++++|+ ++|++ +.+.+.+. ....+.+..+|+++.+.+
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~l~~~-~~~~l~av~d~~--~~~~~a~~---------------~~~~~~~~~~~~~~ll~~ 63 (349)
T 3i23_A 2 TVKMGFIGFGKSANRYHLPYVMIR-ETLEVKTIFDLH--VNEKAAAP---------------FKEKGVNFTADLNELLTD 63 (349)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTC-TTEEEEEEECTT--CCHHHHHH---------------HHTTTCEEESCTHHHHSC
T ss_pred eeEEEEEccCHHHHHHHHHHHhhC-CCeEEEEEECCC--HHHHHHHh---------------hCCCCCeEECCHHHHhcC
Confidence 36999999999998 456656553 578875 67877 22222210 000235677889988765
Q ss_pred --CcEEEEeccCC
Q 011641 79 --ADIVFVSVNTP 89 (480)
Q Consensus 79 --aDvVii~Vptp 89 (480)
.|+|++|+|+.
T Consensus 64 ~~~D~V~i~tp~~ 76 (349)
T 3i23_A 64 PEIELITICTPAH 76 (349)
T ss_dssp TTCCEEEECSCGG
T ss_pred CCCCEEEEeCCcH
Confidence 89999998754
No 256
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=97.49 E-value=0.00062 Score=62.48 Aligned_cols=71 Identities=18% Similarity=0.259 Sum_probs=51.7
Q ss_pred cEEEEEC-CChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|||.|.| .|.+|..++..|+++ |++|++++|++++.+.+..+ ..+..-++ ++...+++.++|
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~-~~~~~~D~--------------~d~~~~~~~~~d 63 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNR--GHEVTAIVRNAGKITQTHKD-INILQKDI--------------FDLTLSDLSDQN 63 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCSHHHHHHCSS-SEEEECCG--------------GGCCHHHHTTCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhC--CCEEEEEEcCchhhhhccCC-CeEEeccc--------------cChhhhhhcCCC
Confidence 7999999 599999999999998 99999999999888776421 11111111 010014678999
Q ss_pred EEEEeccCC
Q 011641 81 IVFVSVNTP 89 (480)
Q Consensus 81 vVii~Vptp 89 (480)
+||-|...+
T Consensus 64 ~vi~~ag~~ 72 (221)
T 3ew7_A 64 VVVDAYGIS 72 (221)
T ss_dssp EEEECCCSS
T ss_pred EEEECCcCC
Confidence 999998754
No 257
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=97.49 E-value=0.00048 Score=68.89 Aligned_cols=104 Identities=11% Similarity=0.133 Sum_probs=78.7
Q ss_pred cCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccce
Q 011641 321 TVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+. .-...+++.|...|++|.+||+.....+....+ ++
T Consensus 161 ~l~gktvGIIG~G----------~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~----------------------g~ 208 (351)
T 3jtm_A 161 DLEGKTIGTVGAG----------RIGKLLLQRLKPFGCNLLYHDRLQMAPELEKET----------------------GA 208 (351)
T ss_dssp CSTTCEEEEECCS----------HHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHH----------------------CC
T ss_pred cccCCEEeEEEeC----------HHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhC----------------------CC
Confidence 5789999999984 478899999999999999999876443333322 24
Q ss_pred EEecCHHhhcccccEEEEEecC-cccccccHHHHHHhcCCCCEEEEcCC--CCChhhhh
Q 011641 401 SVVWDAYEATKDAHGVCILTEW-DEFKTLDYQRIYDNMQKPAFVFDGRN--VVDANKLR 456 (480)
Q Consensus 401 ~~~~~~~~a~~~ad~vvi~t~~-~~~~~~~~~~~~~~~~~~~~viD~~~--~~~~~~~~ 456 (480)
.+.+++++.++.+|+|+++++. ++-+++=-.+..+.|++.+++||+-+ ++|.+.+.
T Consensus 209 ~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~ 267 (351)
T 3jtm_A 209 KFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVV 267 (351)
T ss_dssp EECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHH
T ss_pred eEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHH
Confidence 5567899999999999999986 34444333456778998889999976 66655443
No 258
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=97.48 E-value=0.00025 Score=71.70 Aligned_cols=71 Identities=15% Similarity=0.269 Sum_probs=51.5
Q ss_pred cEEEEEC-CChhHHH-HH----HHHHHcCCCCeE----------EEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCC
Q 011641 2 VKICCIG-AGYVGGP-TM----AVIALKCPSIEV----------AVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKN 65 (480)
Q Consensus 2 mkI~VIG-lG~~G~~-lA----~~La~~~~G~~V----------~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~ 65 (480)
+||+||| +|.||.. .+ ..+.+. ++..+ .++|+++++.+.+.+.. +.
T Consensus 7 irigiiG~~G~~g~~~h~~~~~~~~~~~-~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~-----------------~~ 68 (383)
T 3oqb_A 7 LGLIMNGVTGRMGLNQHLIRSIVAIRDQ-GGVRLKNGDRIMPDPILVGRSAEKVEALAKRF-----------------NI 68 (383)
T ss_dssp EEEEEESTTSTHHHHTTTTTTHHHHHHH-TSEECTTSCEEEEEEEEECSSSHHHHHHHHHT-----------------TC
T ss_pred eEEEEEeccchhhhhhhHHHHHHHHhhc-CceeecCCcccceeeEEEcCCHHHHHHHHHHh-----------------CC
Confidence 5899999 9999997 66 666665 23333 38999999988876421 11
Q ss_pred EEEecCHHHhhcc--CcEEEEeccCCC
Q 011641 66 LFFSTDVEKHVSE--ADIVFVSVNTPT 90 (480)
Q Consensus 66 l~~t~d~~~a~~~--aDvVii~Vptp~ 90 (480)
.++++|+++.+++ .|+|++|+|+..
T Consensus 69 ~~~~~~~~~ll~~~~iD~V~i~tp~~~ 95 (383)
T 3oqb_A 69 ARWTTDLDAALADKNDTMFFDAATTQA 95 (383)
T ss_dssp CCEESCHHHHHHCSSCCEEEECSCSSS
T ss_pred CcccCCHHHHhcCCCCCEEEECCCchH
Confidence 1356888887754 899999988643
No 259
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=97.47 E-value=0.0003 Score=70.47 Aligned_cols=101 Identities=9% Similarity=0.126 Sum_probs=76.1
Q ss_pred CcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccc
Q 011641 320 NTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+. .-...+++.|...|++|.+|||....+.. .. .+
T Consensus 156 ~~l~g~tvGIIGlG----------~IG~~vA~~l~~~G~~V~~~d~~~~~~~~-~~----------------------~g 202 (352)
T 3gg9_A 156 RVLKGQTLGIFGYG----------KIGQLVAGYGRAFGMNVLVWGRENSKERA-RA----------------------DG 202 (352)
T ss_dssp CCCTTCEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSHHHHHHH-HH----------------------TT
T ss_pred ccCCCCEEEEEeEC----------HHHHHHHHHHHhCCCEEEEECCCCCHHHH-Hh----------------------cC
Confidence 35689999999985 47789999999999999999997533221 11 23
Q ss_pred eEEecCHHhhcccccEEEEEecCc-ccccccHHHHHHhcCCCCEEEEcCC--CCChh
Q 011641 400 VSVVWDAYEATKDAHGVCILTEWD-EFKTLDYQRIYDNMQKPAFVFDGRN--VVDAN 453 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~~~-~~~~~~~~~~~~~~~~~~~viD~~~--~~~~~ 453 (480)
+++.+++++.++++|+|+++++-. +-+++--.+..+.|++.+++||+-+ +++.+
T Consensus 203 ~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~ 259 (352)
T 3gg9_A 203 FAVAESKDALFEQSDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEEN 259 (352)
T ss_dssp CEECSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCTT
T ss_pred ceEeCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcHH
Confidence 566678999999999999998764 3444333456788998889999976 55544
No 260
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=97.47 E-value=0.00024 Score=73.42 Aligned_cols=73 Identities=14% Similarity=0.200 Sum_probs=54.7
Q ss_pred cEEEEECC----ChhHHHHHHHHHHcCCCCeE-EEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhh
Q 011641 2 VKICCIGA----GYVGGPTMAVIALKCPSIEV-AVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV 76 (480)
Q Consensus 2 mkI~VIGl----G~~G~~lA~~La~~~~G~~V-~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~ 76 (480)
+||+|||+ |.||..++..|.+..++++| .++|+++++.+.+.+.. +. ...+..+|+++.+
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~------g~---------~~~~~~~~~~~ll 85 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRL------KL---------SNATAFPTLESFA 85 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHT------TC---------TTCEEESSHHHHH
T ss_pred CEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHc------CC---------CcceeeCCHHHHh
Confidence 58999999 99999999999874247776 57899999887766421 00 1235678888877
Q ss_pred c--cCcEEEEeccCC
Q 011641 77 S--EADIVFVSVNTP 89 (480)
Q Consensus 77 ~--~aDvVii~Vptp 89 (480)
+ +.|+|++|+|+.
T Consensus 86 ~~~~vD~V~i~tp~~ 100 (438)
T 3btv_A 86 SSSTIDMIVIAIQVA 100 (438)
T ss_dssp HCSSCSEEEECSCHH
T ss_pred cCCCCCEEEEeCCcH
Confidence 5 689999998753
No 261
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.47 E-value=8.2e-05 Score=71.93 Aligned_cols=73 Identities=10% Similarity=0.135 Sum_probs=47.4
Q ss_pred cEEEEECC-ChhHHHHHHHHHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccC
Q 011641 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
|||+|+|+ |.||..++..+... ++++++ ++|+++++.. +..--...++ ....+..++|+++++.++
T Consensus 6 mkV~V~Ga~G~mG~~~~~~~~~~-~~~elva~~d~~~~~~~----g~d~~~~~g~-------~~~~v~~~~dl~~~l~~~ 73 (273)
T 1dih_A 6 IRVAIAGAGGRMGRQLIQAALAL-EGVQLGAALEREGSSLL----GSDAGELAGA-------GKTGVTVQSSLDAVKDDF 73 (273)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHS-TTEECCCEECCTTCTTC----SCCTTCSSSS-------SCCSCCEESCSTTTTTSC
T ss_pred cEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCchhhh----hhhHHHHcCC-------CcCCceecCCHHHHhcCC
Confidence 79999998 99999999988764 488877 7788653210 1000000000 012345677888777899
Q ss_pred cEEEEec
Q 011641 80 DIVFVSV 86 (480)
Q Consensus 80 DvVii~V 86 (480)
|+||-++
T Consensus 74 DvVIDft 80 (273)
T 1dih_A 74 DVFIDFT 80 (273)
T ss_dssp SEEEECS
T ss_pred CEEEEcC
Confidence 9999554
No 262
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=97.47 E-value=0.0015 Score=60.05 Aligned_cols=71 Identities=18% Similarity=0.171 Sum_probs=52.0
Q ss_pred cEEEEECC-ChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|||.|.|+ |.+|..++..|+++ |++|++++|++++.+.+......+..-++ ++...+++.++|
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~D~--------------~d~~~~~~~~~d 64 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRR--GHEVLAVVRDPQKAADRLGATVATLVKEP--------------LVLTEADLDSVD 64 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHTCTTSEEEECCG--------------GGCCHHHHTTCS
T ss_pred CEEEEEcCCCHHHHHHHHHHHHC--CCEEEEEEecccccccccCCCceEEeccc--------------ccccHhhcccCC
Confidence 79999997 99999999999998 99999999999988776542221111111 000014578999
Q ss_pred EEEEeccC
Q 011641 81 IVFVSVNT 88 (480)
Q Consensus 81 vVii~Vpt 88 (480)
+||-|...
T Consensus 65 ~vi~~ag~ 72 (224)
T 3h2s_A 65 AVVDALSV 72 (224)
T ss_dssp EEEECCCC
T ss_pred EEEECCcc
Confidence 99999765
No 263
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=97.46 E-value=0.00053 Score=68.39 Aligned_cols=103 Identities=8% Similarity=0.044 Sum_probs=78.0
Q ss_pred CcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccc
Q 011641 320 NTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+. .-...+++.|...|++|.+|||.....+... +
T Consensus 169 ~~l~gktvGIIGlG----------~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~------------------------g 214 (345)
T 4g2n_A 169 MGLTGRRLGIFGMG----------RIGRAIATRARGFGLAIHYHNRTRLSHALEE------------------------G 214 (345)
T ss_dssp CCCTTCEEEEESCS----------HHHHHHHHHHHTTTCEEEEECSSCCCHHHHT------------------------T
T ss_pred cccCCCEEEEEEeC----------hhHHHHHHHHHHCCCEEEEECCCCcchhhhc------------------------C
Confidence 46789999999984 4789999999999999999999864432211 3
Q ss_pred eEEecCHHhhcccccEEEEEecCc-ccccccHHHHHHhcCCCCEEEEcCC--CCChhhhh
Q 011641 400 VSVVWDAYEATKDAHGVCILTEWD-EFKTLDYQRIYDNMQKPAFVFDGRN--VVDANKLR 456 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~~~-~~~~~~~~~~~~~~~~~~~viD~~~--~~~~~~~~ 456 (480)
..+.+++++.++++|+|+++++.. +-+.+--.+....|++.+++||+-+ ++|.+.+.
T Consensus 215 ~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~ 274 (345)
T 4g2n_A 215 AIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINISRGDLINDDALI 274 (345)
T ss_dssp CEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHH
T ss_pred CeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHH
Confidence 456678999999999999999863 3333322456678998889999876 67765443
No 264
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=97.44 E-value=0.0003 Score=67.60 Aligned_cols=69 Identities=9% Similarity=0.066 Sum_probs=50.9
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
||||.|.|+|++|..++..|.++ |++|++++|++++.+.+......+.. +.+ +|++ +.++|
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~------------~D~---~d~~--~~~~d 65 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQ--GWRIIGTSRNPDQMEAIRASGAEPLL------------WPG---EEPS--LDGVT 65 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGG--TCEEEEEESCGGGHHHHHHTTEEEEE------------SSS---SCCC--CTTCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHC--CCEEEEEEcChhhhhhHhhCCCeEEE------------ecc---cccc--cCCCC
Confidence 57999999999999999999998 99999999999887776542211110 001 1222 67899
Q ss_pred EEEEeccC
Q 011641 81 IVFVSVNT 88 (480)
Q Consensus 81 vVii~Vpt 88 (480)
+||-|...
T Consensus 66 ~vi~~a~~ 73 (286)
T 3ius_A 66 HLLISTAP 73 (286)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99998753
No 265
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=97.44 E-value=0.00073 Score=67.84 Aligned_cols=102 Identities=18% Similarity=0.260 Sum_probs=75.3
Q ss_pred CcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccc
Q 011641 320 NTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+. .-...+++.|...|++|.+|||....+... .. +
T Consensus 172 ~~l~gktvGIIGlG----------~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~-~~----------------------g 218 (365)
T 4hy3_A 172 RLIAGSEIGIVGFG----------DLGKALRRVLSGFRARIRVFDPWLPRSMLE-EN----------------------G 218 (365)
T ss_dssp CCSSSSEEEEECCS----------HHHHHHHHHHTTSCCEEEEECSSSCHHHHH-HT----------------------T
T ss_pred cccCCCEEEEecCC----------cccHHHHHhhhhCCCEEEEECCCCCHHHHh-hc----------------------C
Confidence 35789999999985 478999999999999999999986544322 21 2
Q ss_pred eEEecCHHhhcccccEEEEEecCc-ccccccHHHHHHhcCCCCEEEEcCC--CCChhhh
Q 011641 400 VSVVWDAYEATKDAHGVCILTEWD-EFKTLDYQRIYDNMQKPAFVFDGRN--VVDANKL 455 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~~~-~~~~~~~~~~~~~~~~~~~viD~~~--~~~~~~~ 455 (480)
+.+ .++++.++.+|+|+++++-. +-+++--.+..+.|++.+++||+-+ ++|.+.+
T Consensus 219 ~~~-~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL 276 (365)
T 4hy3_A 219 VEP-ASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDAL 276 (365)
T ss_dssp CEE-CCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHH
T ss_pred eee-CCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHH
Confidence 333 48999999999999988764 3344333466788998889999975 6675443
No 266
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=97.42 E-value=0.00059 Score=69.69 Aligned_cols=70 Identities=19% Similarity=0.325 Sum_probs=52.2
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCC-eEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
++|+|||+|.||..++..+... |. +|+++|+++++.+.+.+.. + .......++.+.+.++|
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~--G~~~V~v~~r~~~ra~~la~~~------g----------~~~~~~~~l~~~l~~aD 229 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDR--GVRAVLVANRTYERAVELARDL------G----------GEAVRFDELVDHLARSD 229 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH--CCSEEEEECSSHHHHHHHHHHH------T----------CEECCGGGHHHHHHTCS
T ss_pred CEEEEEChHHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHc------C----------CceecHHhHHHHhcCCC
Confidence 5799999999999999999988 87 9999999998875554310 0 00000135566678999
Q ss_pred EEEEeccCC
Q 011641 81 IVFVSVNTP 89 (480)
Q Consensus 81 vVii~Vptp 89 (480)
+||.|+|.+
T Consensus 230 vVi~at~~~ 238 (404)
T 1gpj_A 230 VVVSATAAP 238 (404)
T ss_dssp EEEECCSSS
T ss_pred EEEEccCCC
Confidence 999998754
No 267
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=97.39 E-value=0.00023 Score=71.61 Aligned_cols=70 Identities=14% Similarity=0.116 Sum_probs=51.6
Q ss_pred EEEEECCChhHHHHHHHHHHcCCC-------Ce-EEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHH
Q 011641 3 KICCIGAGYVGGPTMAVIALKCPS-------IE-VAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEK 74 (480)
Q Consensus 3 kI~VIGlG~~G~~lA~~La~~~~G-------~~-V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~ 74 (480)
||||||+|.||...+..+... ++ .+ |.++|+++++.+.+.+.. +..++.+|+++
T Consensus 8 rvgiIG~G~ig~~h~~~~~~~-~~~~~~~~~~~l~av~d~~~~~a~~~a~~~-----------------g~~~~~~d~~~ 69 (390)
T 4h3v_A 8 GIGLIGYAFMGAAHSQAWRSA-PRFFDLPLHPDLNVLCGRDAEAVRAAAGKL-----------------GWSTTETDWRT 69 (390)
T ss_dssp EEEEECHHHHHHHHHHHHHHH-HHHSCCSSEEEEEEEECSSHHHHHHHHHHH-----------------TCSEEESCHHH
T ss_pred cEEEEcCCHHHHHHHHHHHhC-ccccccccCceEEEEEcCCHHHHHHHHHHc-----------------CCCcccCCHHH
Confidence 699999999999988887653 11 24 457899999988876420 12256789998
Q ss_pred hhc--cCcEEEEeccCCC
Q 011641 75 HVS--EADIVFVSVNTPT 90 (480)
Q Consensus 75 a~~--~aDvVii~Vptp~ 90 (480)
.++ +.|+|+||+|+..
T Consensus 70 ll~~~~iDaV~I~tP~~~ 87 (390)
T 4h3v_A 70 LLERDDVQLVDVCTPGDS 87 (390)
T ss_dssp HTTCTTCSEEEECSCGGG
T ss_pred HhcCCCCCEEEEeCChHH
Confidence 775 5899999988643
No 268
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=97.36 E-value=0.00022 Score=61.71 Aligned_cols=99 Identities=10% Similarity=0.002 Sum_probs=64.1
Q ss_pred cEEEEECC----ChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc
Q 011641 2 VKICCIGA----GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS 77 (480)
Q Consensus 2 mkI~VIGl----G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (480)
.+|+|||+ |.+|..++.+|.+. ||+ +|++|+.+... .+ .++.+..+++++.+
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~--G~~--v~~vnp~~~~~------~i--------------~G~~~~~sl~el~~ 69 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQ--GYR--VLPVNPRFQGE------EL--------------FGEEAVASLLDLKE 69 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHT--TCE--EEEECGGGTTS------EE--------------TTEECBSSGGGCCS
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHC--CCE--EEEeCCCcccC------cC--------------CCEEecCCHHHCCC
Confidence 47999999 89999999999998 897 67777763100 00 13566677777666
Q ss_pred cCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
..|++++|+|.. .+.++++++...-. ..+++..++. .+++.+..++.
T Consensus 70 ~vDlavi~vp~~---------------~~~~v~~~~~~~gi-~~i~~~~g~~----~~~~~~~a~~~ 116 (140)
T 1iuk_A 70 PVDILDVFRPPS---------------ALMDHLPEVLALRP-GLVWLQSGIR----HPEFEKALKEA 116 (140)
T ss_dssp CCSEEEECSCHH---------------HHTTTHHHHHHHCC-SCEEECTTCC----CHHHHHHHHHT
T ss_pred CCCEEEEEeCHH---------------HHHHHHHHHHHcCC-CEEEEcCCcC----HHHHHHHHHHc
Confidence 899999999842 23344555544332 3555543332 35566666554
No 269
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.35 E-value=0.00038 Score=66.90 Aligned_cols=96 Identities=13% Similarity=0.076 Sum_probs=65.2
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
+++.|||+|.+|.+++..|++. |.+|++++|++++.+.+.+- + +... ++++ +.++|+
T Consensus 119 k~vlvlGaGGaaraia~~L~~~--G~~v~V~nRt~~ka~~la~~------------------~-~~~~-~~~~-l~~~Di 175 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQ--GLQVSVLNRSSRGLDFFQRL------------------G-CDCF-MEPP-KSAFDL 175 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCTTHHHHHHH------------------T-CEEE-SSCC-SSCCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHC------------------C-CeEe-cHHH-hccCCE
Confidence 5799999999999999999998 89999999999988877620 0 1111 1222 348999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcch
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKT 133 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
||-|+|.....+ ...+. +.+...++++.+|++.++.| .|
T Consensus 176 VInaTp~Gm~~~-----~~l~~-------~~l~~~l~~~~~v~D~vY~P-~T 214 (269)
T 3phh_A 176 IINATSASLHNE-----LPLNK-------EVLKGYFKEGKLAYDLAYGF-LT 214 (269)
T ss_dssp EEECCTTCCCCS-----CSSCH-------HHHHHHHHHCSEEEESCCSS-CC
T ss_pred EEEcccCCCCCC-----CCCCh-------HHHHhhCCCCCEEEEeCCCC-ch
Confidence 999977643220 01111 12222345688999988877 44
No 270
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=97.35 E-value=0.00095 Score=66.73 Aligned_cols=105 Identities=11% Similarity=0.166 Sum_probs=77.7
Q ss_pred cCcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHH-hCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccc
Q 011641 319 FNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLL-GDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMV 397 (480)
Q Consensus 319 ~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~-~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (480)
+..+.+++|+|+|+.. -...+++.|. ..|.+|.+||+.....+...++
T Consensus 158 ~~~l~g~~vgIIG~G~----------IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~--------------------- 206 (348)
T 2w2k_A 158 AHNPRGHVLGAVGLGA----------IQKEIARKAVHGLGMKLVYYDVAPADAETEKAL--------------------- 206 (348)
T ss_dssp CCCSTTCEEEEECCSH----------HHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHH---------------------
T ss_pred CcCCCCCEEEEEEECH----------HHHHHHHHHHHhcCCEEEEECCCCcchhhHhhc---------------------
Confidence 3467899999999854 7899999999 9999999999976543322222
Q ss_pred cceEEecCHHhhcccccEEEEEecCc-ccccccHHHHHHhcCCCCEEEEcCCC--CChhhh
Q 011641 398 KQVSVVWDAYEATKDAHGVCILTEWD-EFKTLDYQRIYDNMQKPAFVFDGRNV--VDANKL 455 (480)
Q Consensus 398 ~~~~~~~~~~~a~~~ad~vvi~t~~~-~~~~~~~~~~~~~~~~~~~viD~~~~--~~~~~~ 455 (480)
++.+..++++.++++|+|+++++.. +.+.+=-.++...|++..+|+|+-+. .+.+.+
T Consensus 207 -g~~~~~~l~ell~~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~srg~~vd~~aL 266 (348)
T 2w2k_A 207 -GAERVDSLEELARRSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARGPVISQDAL 266 (348)
T ss_dssp -TCEECSSHHHHHHHCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHH
T ss_pred -CcEEeCCHHHHhccCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHH
Confidence 2445567889999999999999875 35543324566788877799998774 554433
No 271
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=97.33 E-value=0.00018 Score=71.67 Aligned_cols=85 Identities=12% Similarity=0.207 Sum_probs=53.7
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEE-EEECCHHHHHHHHc-CCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccC
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNS-DQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~-~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
+||||+|+|+||..++..|.++ ++.++. +.|+++++...+.+ .....+. .+...+.....+.+.+..++++.+.++
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~-~~~elvav~d~~~~~~~~~~~~~g~~~~~-~~~~~v~~~~~~~~~v~~d~~~l~~~v 80 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQ-DDMELIGITKTKPDFEAYRAKELGIPVYA-ASEEFIPRFEKEGFEVAGTLNDLLEKV 80 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-TTEEEEEEEESSCSHHHHHHHHTTCCEEE-SSGGGHHHHHHHTCCCSCBHHHHHTTC
T ss_pred cEEEEEeEhHHHHHHHHHHhcC-CCCEEEEEEcCCHHHHHHHHHhcCccccc-cccccceeccCCceEEcCcHHHhccCC
Confidence 5999999999999999999875 467765 56887776665543 1112110 000000000011244556888877899
Q ss_pred cEEEEeccC
Q 011641 80 DIVFVSVNT 88 (480)
Q Consensus 80 DvVii~Vpt 88 (480)
|+|++|+|.
T Consensus 81 DvV~~aTp~ 89 (334)
T 2czc_A 81 DIIVDATPG 89 (334)
T ss_dssp SEEEECCST
T ss_pred CEEEECCCc
Confidence 999999774
No 272
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=97.31 E-value=0.00068 Score=67.57 Aligned_cols=84 Identities=20% Similarity=0.262 Sum_probs=55.1
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEE-EEECCHHHHHHHH-cCCCCCcCC-ChHHHHhhhcCCCEEEecCHHHhhc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWN-SDQLPIYEP-GLDGVVKQCRGKNLFFSTDVEKHVS 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~-~~~~~~~e~-~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (480)
|+||||+|+|+||..++..|.++ ++.+|. +.|++++....+. ....+.+.. ..++++. ...+..+.+.++...
T Consensus 1 ~ikVgIiGaG~iG~~~~r~L~~~-p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~---~~~v~v~~~~e~l~~ 76 (340)
T 1b7g_O 1 MVNVAVNGYGTIGKRVADAIIKQ-PDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFE---ESGIPVAGTVEDLIK 76 (340)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC-TTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHH---TTTCCCCCCHHHHHH
T ss_pred CeEEEEEecCHHHHHHHHHHHcC-CCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhc---ccccccccCHhHhhc
Confidence 57999999999999999999875 567765 5677755544333 222333221 2223222 234555667777667
Q ss_pred cCcEEEEeccC
Q 011641 78 EADIVFVSVNT 88 (480)
Q Consensus 78 ~aDvVii~Vpt 88 (480)
++|+||.|+|.
T Consensus 77 ~vDvV~~aTp~ 87 (340)
T 1b7g_O 77 TSDIVVDTTPN 87 (340)
T ss_dssp HCSEEEECCST
T ss_pred CCCEEEECCCC
Confidence 89999999774
No 273
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=97.31 E-value=0.00029 Score=65.11 Aligned_cols=73 Identities=21% Similarity=0.342 Sum_probs=50.5
Q ss_pred CcE-EEEEC-CChhHHHHHHHHH-HcCCCCeEEEEECCHH-HHHHHHc--CCCCCcCCChHHHHhhhcCCCEEEecCHHH
Q 011641 1 MVK-ICCIG-AGYVGGPTMAVIA-LKCPSIEVAVVDISVS-RINAWNS--DQLPIYEPGLDGVVKQCRGKNLFFSTDVEK 74 (480)
Q Consensus 1 ~mk-I~VIG-lG~~G~~lA~~La-~~~~G~~V~~~D~~~~-~v~~l~~--~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~ 74 (480)
||| |.|.| .|.+|..++..|+ +. |++|++++|+++ +.+.+.. ....+.. +.+.-..++++
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~------------~D~~d~~~~~~ 69 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYT--DMHITLYGRQLKTRIPPEIIDHERVTVIE------------GSFQNPGXLEQ 69 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHC--CCEEEEEESSHHHHSCHHHHTSTTEEEEE------------CCTTCHHHHHH
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcC--CceEEEEecCccccchhhccCCCceEEEE------------CCCCCHHHHHH
Confidence 566 99999 6999999999999 77 999999999998 7766631 1100000 01111123345
Q ss_pred hhccCcEEEEecc
Q 011641 75 HVSEADIVFVSVN 87 (480)
Q Consensus 75 a~~~aDvVii~Vp 87 (480)
+++++|+||.+..
T Consensus 70 ~~~~~d~vv~~ag 82 (221)
T 3r6d_A 70 AVTNAEVVFVGAM 82 (221)
T ss_dssp HHTTCSEEEESCC
T ss_pred HHcCCCEEEEcCC
Confidence 6788999999875
No 274
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=97.30 E-value=0.00071 Score=67.11 Aligned_cols=102 Identities=16% Similarity=0.202 Sum_probs=75.6
Q ss_pred cCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccce
Q 011641 321 TVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+. .-...+++.|...|++|.+|||.....+....+ ++
T Consensus 142 ~l~g~tvGIIG~G----------~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~----------------------g~ 189 (330)
T 4e5n_A 142 GLDNATVGFLGMG----------AIGLAMADRLQGWGATLQYHEAKALDTQTEQRL----------------------GL 189 (330)
T ss_dssp CSTTCEEEEECCS----------HHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHH----------------------TE
T ss_pred ccCCCEEEEEeeC----------HHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhc----------------------Cc
Confidence 5689999999984 478899999999999999999987333322222 23
Q ss_pred EEecCHHhhcccccEEEEEecCc-ccccccHHHHHHhcCCCCEEEEcCC--CCChhhh
Q 011641 401 SVVWDAYEATKDAHGVCILTEWD-EFKTLDYQRIYDNMQKPAFVFDGRN--VVDANKL 455 (480)
Q Consensus 401 ~~~~~~~~a~~~ad~vvi~t~~~-~~~~~~~~~~~~~~~~~~~viD~~~--~~~~~~~ 455 (480)
.+. ++++.++.+|+|+++++.. +-+++=-.+..+.|++.+++||+-+ ++|.+.+
T Consensus 190 ~~~-~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL 246 (330)
T 4e5n_A 190 RQV-ACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAV 246 (330)
T ss_dssp EEC-CHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHH
T ss_pred eeC-CHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHH
Confidence 443 7899999999999998863 3344323567788988889999876 5665433
No 275
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=97.30 E-value=0.00016 Score=72.12 Aligned_cols=86 Identities=20% Similarity=0.185 Sum_probs=51.7
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEE-EECCHHHHHHHHc-CCCCCcCCChHHHHhhhcCCCEEEecCHHHhhcc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAV-VDISVSRINAWNS-DQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE 78 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~-~D~~~~~v~~l~~-~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (480)
|+||||+|+|+||..++..|.++ +++++.+ .|++++....+.. .....+. .+...+.......+.+..+.++.+.+
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~-~~~elvav~d~~~~~~~~~~~~~g~~~~~-~~~~~v~~~~~~~l~v~~~~~~~~~~ 78 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQ-DDMKVIGVSKTRPDFEARMALKKGYDLYV-AIPERVKLFEKAGIEVAGTVDDMLDE 78 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTS-SSEEEEEEEESSCSHHHHHHHHTTCCEEE-SSGGGHHHHHHTTCCCCEEHHHHHHT
T ss_pred CeEEEEEeECHHHHHHHHHHHcC-CCcEEEEEEcCChhHHHHhcCCcchhhcc-ccccceeeecCCceEEcCCHHHHhcC
Confidence 68999999999999999999875 4677754 5776554443332 1111111 11110000001234444466666679
Q ss_pred CcEEEEeccC
Q 011641 79 ADIVFVSVNT 88 (480)
Q Consensus 79 aDvVii~Vpt 88 (480)
+|+||.|+|.
T Consensus 79 vDvV~~atp~ 88 (337)
T 1cf2_P 79 ADIVIDCTPE 88 (337)
T ss_dssp CSEEEECCST
T ss_pred CCEEEECCCc
Confidence 9999999774
No 276
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=97.29 E-value=0.00066 Score=68.15 Aligned_cols=112 Identities=17% Similarity=0.213 Sum_probs=82.2
Q ss_pred CCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceEE
Q 011641 323 SNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVSV 402 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (480)
+..+|+|+|+.. ....++..|.+.|.+|.+||......+.... .++..
T Consensus 21 ~~mkIgiIGlG~----------mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~----------------------~g~~~ 68 (358)
T 4e21_A 21 QSMQIGMIGLGR----------MGADMVRRLRKGGHECVVYDLNVNAVQALER----------------------EGIAG 68 (358)
T ss_dssp -CCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSCHHHHHHHHT----------------------TTCBC
T ss_pred cCCEEEEECchH----------HHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH----------------------CCCEE
Confidence 457999999865 7899999999999999999986443222111 23556
Q ss_pred ecCHHhhcccc---cEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCCCCh------hhhhhcCcEEEEecC
Q 011641 403 VWDAYEATKDA---HGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNVVDA------NKLREIGFIVYSIGK 467 (480)
Q Consensus 403 ~~~~~~a~~~a---d~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~~~~------~~~~~~g~~y~~iG~ 467 (480)
+.++.++++++ |+|+++++.+..++ -++.+...+++..+|||+.+.... +.+.+.|+.|...+.
T Consensus 69 ~~s~~e~~~~a~~~DvVi~~vp~~~v~~-vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapV 141 (358)
T 4e21_A 69 ARSIEEFCAKLVKPRVVWLMVPAAVVDS-MLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGT 141 (358)
T ss_dssp CSSHHHHHHHSCSSCEEEECSCGGGHHH-HHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred eCCHHHHHhcCCCCCEEEEeCCHHHHHH-HHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCC
Confidence 77899999999 99999998884433 235666777767799999998742 234456888877643
No 277
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=97.29 E-value=0.0023 Score=63.20 Aligned_cols=115 Identities=14% Similarity=0.081 Sum_probs=70.3
Q ss_pred CcEEEEECCChhHHH-HHHHHHHcCCCCeEEEEECCH--HHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhh-
Q 011641 1 MVKICCIGAGYVGGP-TMAVIALKCPSIEVAVVDISV--SRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV- 76 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~-lA~~La~~~~G~~V~~~D~~~--~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~- 76 (480)
||||.|||+|.+|.+ +|..|.++ |++|+++|.++ ...+.|.+...+ +..-.+.+...
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~--G~~V~~~D~~~~~~~~~~L~~~gi~-----------------v~~g~~~~~l~~ 64 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEA--GFEVSGCDAKMYPPMSTQLEALGID-----------------VYEGFDAAQLDE 64 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHT--TCEEEEEESSCCTTHHHHHHHTTCE-----------------EEESCCGGGGGS
T ss_pred CcEEEEEEECHHHHHHHHHHHHhC--CCEEEEEcCCCCcHHHHHHHhCCCE-----------------EECCCCHHHcCC
Confidence 689999999999996 88888888 99999999864 234445432211 12223444423
Q ss_pred ccCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHH----------HHHhh-CCCCcEEEEecCCCcchHHH-HHHHHHhc
Q 011641 77 SEADIVFVSVNTPTKTQGLGAGKAADLTYWESAAR----------VIADV-SKSDKIVVEKSTVPVKTAEA-IEKILTHN 144 (480)
Q Consensus 77 ~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~----------~i~~~-l~~~~iVi~~STv~~gt~~~-l~~~l~~~ 144 (480)
.++|+||++-.-|. |...+..+.+ -+... ++...+|-+..|..-.||.. +..+|++.
T Consensus 65 ~~~d~vV~Spgi~~-----------~~p~~~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~ 133 (326)
T 3eag_A 65 FKADVYVIGNVAKR-----------GMDVVEAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYA 133 (326)
T ss_dssp CCCSEEEECTTCCT-----------TCHHHHHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEECCCcCC-----------CCHHHHHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHc
Confidence 47999988743332 2222333322 12332 23346777777776666655 56777765
Q ss_pred C
Q 011641 145 S 145 (480)
Q Consensus 145 ~ 145 (480)
+
T Consensus 134 g 134 (326)
T 3eag_A 134 G 134 (326)
T ss_dssp T
T ss_pred C
Confidence 3
No 278
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=97.28 E-value=0.00061 Score=59.14 Aligned_cols=97 Identities=10% Similarity=-0.014 Sum_probs=63.0
Q ss_pred cEEEEECC----ChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc
Q 011641 2 VKICCIGA----GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS 77 (480)
Q Consensus 2 mkI~VIGl----G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (480)
.+|+|||+ |.+|..++..|.+. |++ +|++|+.. +.+ .++.+..++++...
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~--G~~--v~~Vnp~~-~~i---------------------~G~~~y~sl~~l~~ 76 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEH--GYD--VYPVNPKY-EEV---------------------LGRKCYPSVLDIPD 76 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHT--TCE--EEEECTTC-SEE---------------------TTEECBSSGGGCSS
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHC--CCE--EEEECCCC-CeE---------------------CCeeccCCHHHcCC
Confidence 47999999 79999999999988 897 56666542 100 13566677777666
Q ss_pred cCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
.+|++++|+|.+ .+.++++++...-. ..+++ .++.. .+++.+..++.
T Consensus 77 ~vDlvvi~vp~~---------------~~~~vv~~~~~~gi-~~i~~-~~g~~---~~~l~~~a~~~ 123 (144)
T 2d59_A 77 KIEVVDLFVKPK---------------LTMEYVEQAIKKGA-KVVWF-QYNTY---NREASKKADEA 123 (144)
T ss_dssp CCSEEEECSCHH---------------HHHHHHHHHHHHTC-SEEEE-CTTCC---CHHHHHHHHHT
T ss_pred CCCEEEEEeCHH---------------HHHHHHHHHHHcCC-CEEEE-CCCch---HHHHHHHHHHc
Confidence 899999998842 34556666555322 34443 33222 35565665554
No 279
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=97.28 E-value=0.00028 Score=71.16 Aligned_cols=71 Identities=17% Similarity=0.157 Sum_probs=49.1
Q ss_pred EEEEECCChhHHHHHHHHHHc------CCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHh
Q 011641 3 KICCIGAGYVGGPTMAVIALK------CPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKH 75 (480)
Q Consensus 3 kI~VIGlG~~G~~lA~~La~~------~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a 75 (480)
||||||+|.||...+..+... .++.+|+ ++|+++++.+++.+.. +.-++.+|+++.
T Consensus 27 rvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~-----------------g~~~~y~d~~el 89 (393)
T 4fb5_A 27 GIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEF-----------------GFEKATADWRAL 89 (393)
T ss_dssp EEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHH-----------------TCSEEESCHHHH
T ss_pred cEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHh-----------------CCCeecCCHHHH
Confidence 699999999999877665431 1345654 6899999888776420 112567899987
Q ss_pred hc--cCcEEEEeccCCC
Q 011641 76 VS--EADIVFVSVNTPT 90 (480)
Q Consensus 76 ~~--~aDvVii~Vptp~ 90 (480)
++ +.|+|+||+|+..
T Consensus 90 l~~~~iDaV~IatP~~~ 106 (393)
T 4fb5_A 90 IADPEVDVVSVTTPNQF 106 (393)
T ss_dssp HHCTTCCEEEECSCGGG
T ss_pred hcCCCCcEEEECCChHH
Confidence 75 5799999988643
No 280
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=97.27 E-value=0.00089 Score=64.83 Aligned_cols=108 Identities=9% Similarity=0.076 Sum_probs=77.6
Q ss_pred CeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceEEec
Q 011641 325 KKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVSVVW 404 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (480)
.||+|+|+.. ....++..|.+.|.+|.+||+.....+...+ .++....
T Consensus 2 ~~i~iIG~G~----------mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~----------------------~g~~~~~ 49 (287)
T 3pef_A 2 QKFGFIGLGI----------MGSAMAKNLVKAGCSVTIWNRSPEKAEELAA----------------------LGAERAA 49 (287)
T ss_dssp CEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSSGGGGHHHHH----------------------TTCEECS
T ss_pred CEEEEEeecH----------HHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH----------------------CCCeecC
Confidence 5899999865 7899999999999999999987554332221 2466778
Q ss_pred CHHhhcccccEEEEEecCc-ccccccH--HHHHHhcCCCCEEEEcCCCCChh------hhhhcCcEEEE
Q 011641 405 DAYEATKDAHGVCILTEWD-EFKTLDY--QRIYDNMQKPAFVFDGRNVVDAN------KLREIGFIVYS 464 (480)
Q Consensus 405 ~~~~a~~~ad~vvi~t~~~-~~~~~~~--~~~~~~~~~~~~viD~~~~~~~~------~~~~~g~~y~~ 464 (480)
++.++++++|+|+++++.+ ..++.-+ +.+...+++..+|+|..+..... .+.+.|..|..
T Consensus 50 ~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~ 118 (287)
T 3pef_A 50 TPCEVVESCPVTFAMLADPAAAEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLE 118 (287)
T ss_dssp SHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHhcCCEEEEEcCCHHHHHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEEE
Confidence 9999999999999999865 3333211 44556676667999998765432 23345777754
No 281
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=97.26 E-value=0.0086 Score=56.88 Aligned_cols=113 Identities=19% Similarity=0.196 Sum_probs=75.6
Q ss_pred CCEEEecCHHHhhccCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHh
Q 011641 64 KNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTH 143 (480)
Q Consensus 64 ~~l~~t~d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~ 143 (480)
-++++++|-.||++++|++|+-+|- .. .-..+++.|.+++++|.+|....|+|+-. +..+|+.
T Consensus 127 aGVkVtsDD~EAvk~AEi~IlftPf--G~------------~t~~Iakkii~~lpEgAII~nTCTipp~~---ly~~le~ 189 (358)
T 2b0j_A 127 VGLKVTSDDREAVEGADIVITWLPK--GN------------KQPDIIKKFADAIPEGAIVTHACTIPTTK---FAKIFKD 189 (358)
T ss_dssp GTCEEESCHHHHHTTCSEEEECCTT--CT------------THHHHHHHHGGGSCTTCEEEECSSSCHHH---HHHHHHH
T ss_pred cCcEeecchHHHhcCCCEEEEecCC--CC------------CcHHHHHHHHhhCcCCCEEecccCCCHHH---HHHHHHH
Confidence 4578999988999999999999663 21 12567899999999999999988998654 4445554
Q ss_pred cCCCCceEEe-eCCccccccccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCeEE
Q 011641 144 NSKGIKFQIL-SNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRIL 205 (480)
Q Consensus 144 ~~~g~~~~v~-~~Pe~~~~G~a~~~~~~~~~vviG~~~~~~~~~~~e~~~~l~~~~~~~~~v~ 205 (480)
..+ .|+.+. |+|-- .||.. . +..+|.. ..+++..+++.+|-++... ..+.
T Consensus 190 l~R-~DvgIsS~HPaa-VPgt~-----G--q~~~g~~--yAtEEqIeklveLaksa~k-~ay~ 240 (358)
T 2b0j_A 190 LGR-EDLNITSYHPGC-VPEMK-----G--QVYIAEG--YASEEAVNKLYEIGKIARG-KAFK 240 (358)
T ss_dssp TTC-TTSEEEECBCSS-CTTTC-----C--CEEEEES--SSCHHHHHHHHHHHHHHHS-CEEE
T ss_pred hCc-ccCCeeccCCCC-CCCCC-----C--ccccccc--cCCHHHHHHHHHHHHHhCC-CeEe
Confidence 332 234433 56642 34441 1 2334532 3368889999998888753 4443
No 282
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.24 E-value=0.00081 Score=68.17 Aligned_cols=41 Identities=17% Similarity=0.229 Sum_probs=35.8
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS 44 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~ 44 (480)
.+|+|+|+|.+|...+..+... |.+|+++|+++++.+.+.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~--Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRL--GAVVMATDVRAATKEQVES 213 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH
Confidence 4799999999999999988887 8899999999887776654
No 283
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=97.24 E-value=0.00082 Score=66.63 Aligned_cols=61 Identities=13% Similarity=0.205 Sum_probs=46.3
Q ss_pred cEEEEECCChhHH-HHHHHHHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhcc-
Q 011641 2 VKICCIGAGYVGG-PTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE- 78 (480)
Q Consensus 2 mkI~VIGlG~~G~-~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~- 78 (480)
+||+|||+|.||. ..+..|.+. ++.+|+ ++|+++++ .++...+|+++.+++
T Consensus 26 ~rvgiiG~G~ig~~~~~~~l~~~-~~~~lvav~d~~~~~-------------------------~g~~~~~~~~~ll~~~ 79 (330)
T 4ew6_A 26 INLAIVGVGKIVRDQHLPSIAKN-ANFKLVATASRHGTV-------------------------EGVNSYTTIEAMLDAE 79 (330)
T ss_dssp EEEEEECCSHHHHHTHHHHHHHC-TTEEEEEEECSSCCC-------------------------TTSEEESSHHHHHHHC
T ss_pred ceEEEEecCHHHHHHHHHHHHhC-CCeEEEEEEeCChhh-------------------------cCCCccCCHHHHHhCC
Confidence 5899999999998 688888875 577765 57887431 124567888887754
Q ss_pred --CcEEEEeccC
Q 011641 79 --ADIVFVSVNT 88 (480)
Q Consensus 79 --aDvVii~Vpt 88 (480)
.|+|++|+|+
T Consensus 80 ~~vD~V~i~tp~ 91 (330)
T 4ew6_A 80 PSIDAVSLCMPP 91 (330)
T ss_dssp TTCCEEEECSCH
T ss_pred CCCCEEEEeCCc
Confidence 8999999774
No 284
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=97.23 E-value=0.002 Score=65.31 Aligned_cols=90 Identities=11% Similarity=0.092 Sum_probs=65.6
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHH------HHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHh
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSR------INAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKH 75 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~------v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a 75 (480)
+||+|||.|.-|.+-|.+|.+. |.+|++=-|.... .+...+ .++++. +++++
T Consensus 38 K~IaVIGyGsQG~AqAlNLRDS--Gv~V~Vglr~~s~~e~~~S~~~A~~-------------------~Gf~v~-~~~eA 95 (491)
T 3ulk_A 38 KKVVIVGCGAQGLNQGLNMRDS--GLDISYALRKEAIAEKRASWRKATE-------------------NGFKVG-TYEEL 95 (491)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT--TCEEEEEECHHHHHTTCHHHHHHHH-------------------TTCEEE-EHHHH
T ss_pred CEEEEeCCChHhHHHHhHHHhc--CCcEEEEeCCCCcccccchHHHHHH-------------------CCCEec-CHHHH
Confidence 5899999999999999999998 9999876552211 111111 234543 57888
Q ss_pred hccCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecC
Q 011641 76 VSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST 128 (480)
Q Consensus 76 ~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST 128 (480)
++.+|+|++-+|... -..+.+.|.+++++|..+.....
T Consensus 96 ~~~ADvV~~L~PD~~---------------q~~vy~~I~p~lk~G~~L~faHG 133 (491)
T 3ulk_A 96 IPQADLVINLTPDKQ---------------HSDVVRTVQPLMKDGAALGYSHG 133 (491)
T ss_dssp GGGCSEEEECSCGGG---------------HHHHHHHHGGGSCTTCEEEESSC
T ss_pred HHhCCEEEEeCChhh---------------HHHHHHHHHhhCCCCCEEEecCc
Confidence 999999999987422 13456789999999998876443
No 285
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=97.23 E-value=0.0085 Score=58.35 Aligned_cols=112 Identities=12% Similarity=0.085 Sum_probs=78.6
Q ss_pred hcCcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccc
Q 011641 318 MFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMV 397 (480)
Q Consensus 318 l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (480)
.+..+.+++|+|+|+. .-+..+++.|...|++|.+|||.....+...+++
T Consensus 151 ~~~~l~g~~v~IiG~G----------~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g-------------------- 200 (300)
T 2rir_A 151 TDYTIHGSQVAVLGLG----------RTGMTIARTFAALGANVKVGARSSAHLARITEMG-------------------- 200 (300)
T ss_dssp CSSCSTTSEEEEECCS----------HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT--------------------
T ss_pred cCCCCCCCEEEEEccc----------HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCC--------------------
Confidence 3457889999999974 4788999999999999999999764332211111
Q ss_pred cceEE--ecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCC---CChhhhhhcCcEEEEe
Q 011641 398 KQVSV--VWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNV---VDANKLREIGFIVYSI 465 (480)
Q Consensus 398 ~~~~~--~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~---~~~~~~~~~g~~y~~i 465 (480)
... ..++++.++++|+|+++++...+ +- ...+.|++..++||.-+- .+-+..+..|..++.+
T Consensus 201 --~~~~~~~~l~~~l~~aDvVi~~~p~~~i---~~-~~~~~mk~g~~lin~a~g~~~~~~~~a~~~G~~~i~~ 267 (300)
T 2rir_A 201 --LVPFHTDELKEHVKDIDICINTIPSMIL---NQ-TVLSSMTPKTLILDLASRPGGTDFKYAEKQGIKALLA 267 (300)
T ss_dssp --CEEEEGGGHHHHSTTCSEEEECCSSCCB---CH-HHHTTSCTTCEEEECSSTTCSBCHHHHHHHTCEEEEC
T ss_pred --CeEEchhhHHHHhhCCCEEEECCChhhh---CH-HHHHhCCCCCEEEEEeCCCCCcCHHHHHHCCCEEEEC
Confidence 111 25688889999999999997443 32 355778877899998652 1224445668777644
No 286
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=97.22 E-value=0.0012 Score=65.20 Aligned_cols=109 Identities=15% Similarity=0.178 Sum_probs=78.1
Q ss_pred CCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceEE
Q 011641 323 SNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVSV 402 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (480)
+..+|+|+|+.. ....++..|.+.|.+|.+||+.....+...+ .++..
T Consensus 30 ~~~~I~iIG~G~----------mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~----------------------~g~~~ 77 (320)
T 4dll_A 30 YARKITFLGTGS----------MGLPMARRLCEAGYALQVWNRTPARAASLAA----------------------LGATI 77 (320)
T ss_dssp CCSEEEEECCTT----------THHHHHHHHHHTTCEEEEECSCHHHHHHHHT----------------------TTCEE
T ss_pred CCCEEEEECccH----------HHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH----------------------CCCEe
Confidence 456999999865 7899999999999999999986543222111 24677
Q ss_pred ecCHHhhcccccEEEEEecCcc-cccccHH--HHHHhcCCCCEEEEcCCCCCh------hhhhhcCcEEEE
Q 011641 403 VWDAYEATKDAHGVCILTEWDE-FKTLDYQ--RIYDNMQKPAFVFDGRNVVDA------NKLREIGFIVYS 464 (480)
Q Consensus 403 ~~~~~~a~~~ad~vvi~t~~~~-~~~~~~~--~~~~~~~~~~~viD~~~~~~~------~~~~~~g~~y~~ 464 (480)
..++.++++++|+|+++++.+. .+.. .. .+.+.+++..+|||..+.... +.+++.|..|..
T Consensus 78 ~~~~~e~~~~aDvVi~~vp~~~~~~~v-~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~ 147 (320)
T 4dll_A 78 HEQARAAARDADIVVSMLENGAVVQDV-LFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLD 147 (320)
T ss_dssp ESSHHHHHTTCSEEEECCSSHHHHHHH-HTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred eCCHHHHHhcCCEEEEECCCHHHHHHH-HcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 8899999999999999998753 2221 11 345566667799999887643 123455777754
No 287
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=97.22 E-value=0.00087 Score=65.19 Aligned_cols=97 Identities=14% Similarity=0.139 Sum_probs=74.7
Q ss_pred cCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccce
Q 011641 321 TVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+. .-...+++.|...|++|.+|||.....+ ..
T Consensus 119 ~l~g~tvGIIGlG----------~IG~~vA~~l~~~G~~V~~~dr~~~~~~---------------------------~~ 161 (290)
T 3gvx_A 119 LLYGKALGILGYG----------GIGRRVAHLAKAFGMRVIAYTRSSVDQN---------------------------VD 161 (290)
T ss_dssp CCTTCEEEEECCS----------HHHHHHHHHHHHHTCEEEEECSSCCCTT---------------------------CS
T ss_pred eeecchheeeccC----------chhHHHHHHHHhhCcEEEEEeccccccc---------------------------cc
Confidence 4678999999984 4788999999999999999999754321 13
Q ss_pred EEecCHHhhcccccEEEEEecC-cccccccHHHHHHhcCCCCEEEEcCC--CCChhh
Q 011641 401 SVVWDAYEATKDAHGVCILTEW-DEFKTLDYQRIYDNMQKPAFVFDGRN--VVDANK 454 (480)
Q Consensus 401 ~~~~~~~~a~~~ad~vvi~t~~-~~~~~~~~~~~~~~~~~~~~viD~~~--~~~~~~ 454 (480)
...+++++.++++|+|+++++. ++-+.+=-.+..+.|++..++||+-+ +.+.+.
T Consensus 162 ~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~a 218 (290)
T 3gvx_A 162 VISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPD 218 (290)
T ss_dssp EECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHH
T ss_pred cccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcc
Confidence 3556899999999999999986 44444333567788998889999875 556543
No 288
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=97.21 E-value=0.0013 Score=65.18 Aligned_cols=101 Identities=10% Similarity=0.162 Sum_probs=74.0
Q ss_pred CcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccc
Q 011641 320 NTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+.. -+..+++.|...|.+|.+||+.....+....+ +
T Consensus 151 ~~l~g~~vgIIG~G~----------iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~----------------------g 198 (330)
T 2gcg_A 151 YGLTQSTVGIIGLGR----------IGQAIARRLKPFGVQRFLYTGRQPRPEEAAEF----------------------Q 198 (330)
T ss_dssp CCCTTCEEEEECCSH----------HHHHHHHHHGGGTCCEEEEESSSCCHHHHHTT----------------------T
T ss_pred cCCCCCEEEEECcCH----------HHHHHHHHHHHCCCEEEEECCCCcchhHHHhc----------------------C
Confidence 356889999999865 78999999999999999999876532222211 2
Q ss_pred eEEecCHHhhcccccEEEEEecCc-ccccccHHHHHHhcCCCCEEEEcCCC--CChh
Q 011641 400 VSVVWDAYEATKDAHGVCILTEWD-EFKTLDYQRIYDNMQKPAFVFDGRNV--VDAN 453 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~~~-~~~~~~~~~~~~~~~~~~~viD~~~~--~~~~ 453 (480)
+.+. ++++.++++|+|+++++.. +.+++--.++.+.|++..++||+-+. .+.+
T Consensus 199 ~~~~-~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~srg~~v~~~ 254 (330)
T 2gcg_A 199 AEFV-STPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQD 254 (330)
T ss_dssp CEEC-CHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECSCGGGBCHH
T ss_pred ceeC-CHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHH
Confidence 4444 7888999999999999875 33443224566788877799998774 5544
No 289
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=97.21 E-value=0.0015 Score=65.69 Aligned_cols=101 Identities=20% Similarity=0.305 Sum_probs=67.4
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCE-EEe---cCHHHhhc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNL-FFS---TDVEKHVS 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l-~~t---~d~~~a~~ 77 (480)
.+|.|+|+|.+|...+..+... |.+|+++|+++++.+.+.+-.. ..+ ... .+..+.+.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~--Ga~V~v~dr~~~r~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~ 229 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGL--GAQVQIFDINVERLSYLETLFG----------------SRVELLYSNSAEIETAVA 229 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHG----------------GGSEEEECCHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhhC----------------ceeEeeeCCHHHHHHHHc
Confidence 4799999999999999999987 8899999999999887764100 011 111 13445567
Q ss_pred cCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcc
Q 011641 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVK 132 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~g 132 (480)
++|+||-|++.|... .+.+ ..+...+.++++.+|++.+..+.|
T Consensus 230 ~~DvVI~~~~~~~~~-------~~~l-----i~~~~~~~~~~g~~ivdv~~~~gg 272 (361)
T 1pjc_A 230 EADLLIGAVLVPGRR-------APIL-----VPASLVEQMRTGSVIVDVAVDQGG 272 (361)
T ss_dssp TCSEEEECCCCTTSS-------CCCC-----BCHHHHTTSCTTCEEEETTCTTCC
T ss_pred CCCEEEECCCcCCCC-------CCee-----cCHHHHhhCCCCCEEEEEecCCCC
Confidence 899999998765321 1110 012334567788888876654433
No 290
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.21 E-value=0.00054 Score=66.41 Aligned_cols=74 Identities=14% Similarity=0.190 Sum_probs=49.0
Q ss_pred CcEEEEEC-CChhHHHHHHHHHHcCCCCeEEE-EECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhcc
Q 011641 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAV-VDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE 78 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~-~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (480)
++||+|+| +|.||..++..+.+. +++++.+ +|+++... .|. ...++.. ....++.+++|+++.+.+
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~-~~~eLvg~vd~~~~~~----~G~------d~gel~G-~~~~gv~v~~dl~~ll~~ 88 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRR-KDVELCAVLVRKGSSF----VDK------DASILIG-SDFLGVRITDDPESAFSN 88 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTC-SSEEEEEEBCCTTCTT----TTS------BGGGGTT-CSCCSCBCBSCHHHHTTS
T ss_pred CeEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCCccc----ccc------chHHhhc-cCcCCceeeCCHHHHhcC
Confidence 36899999 999999999988865 5788665 58764210 010 0111100 001246678899998899
Q ss_pred CcEEEEec
Q 011641 79 ADIVFVSV 86 (480)
Q Consensus 79 aDvVii~V 86 (480)
+|++|-+.
T Consensus 89 aDVvIDFT 96 (288)
T 3ijp_A 89 TEGILDFS 96 (288)
T ss_dssp CSEEEECS
T ss_pred CCEEEEcC
Confidence 99999774
No 291
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=97.20 E-value=0.0012 Score=66.02 Aligned_cols=102 Identities=16% Similarity=0.217 Sum_probs=76.0
Q ss_pred cCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccce
Q 011641 321 TVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+. .-...+++.|...|++|.+|||...... ...+ ++
T Consensus 165 ~l~g~tvGIIG~G----------~IG~~vA~~l~~~G~~V~~~d~~~~~~~-~~~~----------------------g~ 211 (347)
T 1mx3_A 165 RIRGETLGIIGLG----------RVGQAVALRAKAFGFNVLFYDPYLSDGV-ERAL----------------------GL 211 (347)
T ss_dssp CCTTCEEEEECCS----------HHHHHHHHHHHTTTCEEEEECTTSCTTH-HHHH----------------------TC
T ss_pred CCCCCEEEEEeEC----------HHHHHHHHHHHHCCCEEEEECCCcchhh-Hhhc----------------------CC
Confidence 5789999999984 4788999999999999999999866432 2222 23
Q ss_pred EEecCHHhhcccccEEEEEecCc-ccccccHHHHHHhcCCCCEEEEcCC--CCChhhh
Q 011641 401 SVVWDAYEATKDAHGVCILTEWD-EFKTLDYQRIYDNMQKPAFVFDGRN--VVDANKL 455 (480)
Q Consensus 401 ~~~~~~~~a~~~ad~vvi~t~~~-~~~~~~~~~~~~~~~~~~~viD~~~--~~~~~~~ 455 (480)
.+..++++.++++|+|+++++-. +.+++=-.+..+.|++..++||+-+ +.+.+.+
T Consensus 212 ~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL 269 (347)
T 1mx3_A 212 QRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKAL 269 (347)
T ss_dssp EECSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHH
T ss_pred eecCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHH
Confidence 45568899999999999998874 4444322456678988789999876 4565433
No 292
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=97.19 E-value=0.0015 Score=63.61 Aligned_cols=107 Identities=8% Similarity=0.089 Sum_probs=78.8
Q ss_pred CCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceEEe
Q 011641 324 NKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVSVV 403 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (480)
..||+|+|+.+ ....++..|.+.|.+|.+||......+...+ .++..+
T Consensus 15 ~~~I~vIG~G~----------mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~----------------------~g~~~~ 62 (296)
T 3qha_A 15 QLKLGYIGLGN----------MGAPMATRMTEWPGGVTVYDIRIEAMTPLAE----------------------AGATLA 62 (296)
T ss_dssp CCCEEEECCST----------THHHHHHHHTTSTTCEEEECSSTTTSHHHHH----------------------TTCEEC
T ss_pred CCeEEEECcCH----------HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH----------------------CCCEEc
Confidence 35899999866 7899999999999999999986654332221 246677
Q ss_pred cCHHhhcccccEEEEEecCcc-cccccHHHHHHhcCCCCEEEEcCCCCChh------hhhhcCcEEEE
Q 011641 404 WDAYEATKDAHGVCILTEWDE-FKTLDYQRIYDNMQKPAFVFDGRNVVDAN------KLREIGFIVYS 464 (480)
Q Consensus 404 ~~~~~a~~~ad~vvi~t~~~~-~~~~~~~~~~~~~~~~~~viD~~~~~~~~------~~~~~g~~y~~ 464 (480)
+++.++++ +|+|+++++.+. .++ -++.+...+++..+|+|..+..... .+.+.|+.|..
T Consensus 63 ~~~~~~~~-aDvvi~~vp~~~~~~~-v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~ 128 (296)
T 3qha_A 63 DSVADVAA-ADLIHITVLDDAQVRE-VVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVD 128 (296)
T ss_dssp SSHHHHTT-SSEEEECCSSHHHHHH-HHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEE
T ss_pred CCHHHHHh-CCEEEEECCChHHHHH-HHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 89999999 999999999763 332 2356777777777999998876432 23345777754
No 293
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=97.18 E-value=0.0018 Score=64.27 Aligned_cols=95 Identities=17% Similarity=0.196 Sum_probs=72.7
Q ss_pred CcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccc
Q 011641 320 NTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+.. -+..+++.|...|.+|.+||+.... +....+ +
T Consensus 146 ~~l~g~~vgIIG~G~----------iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~----------------------g 192 (334)
T 2dbq_A 146 YDVYGKTIGIIGLGR----------IGQAIAKRAKGFNMRILYYSRTRKE-EVEREL----------------------N 192 (334)
T ss_dssp CCCTTCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSSCCH-HHHHHH----------------------C
T ss_pred cCCCCCEEEEEccCH----------HHHHHHHHHHhCCCEEEEECCCcch-hhHhhc----------------------C
Confidence 357889999999865 7899999999999999999998766 322222 1
Q ss_pred eEEecCHHhhcccccEEEEEecCcc-cccccHHHHHHhcCCCCEEEEcCC
Q 011641 400 VSVVWDAYEATKDAHGVCILTEWDE-FKTLDYQRIYDNMQKPAFVFDGRN 448 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~~~~-~~~~~~~~~~~~~~~~~~viD~~~ 448 (480)
+.+ .+++++++++|+|+++++... .+++--.++...|++..++||+.+
T Consensus 193 ~~~-~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~sr 241 (334)
T 2dbq_A 193 AEF-KPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIAR 241 (334)
T ss_dssp CEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred ccc-CCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence 333 478899999999999998765 444322466778887779999866
No 294
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=97.18 E-value=0.0016 Score=66.09 Aligned_cols=103 Identities=9% Similarity=0.113 Sum_probs=77.1
Q ss_pred CcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccc
Q 011641 320 NTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+. .-...+++.|...|++|.+||+.....+....+ +
T Consensus 187 ~~l~gktvGIIGlG----------~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~----------------------G 234 (393)
T 2nac_A 187 YDLEAMHVGTVAAG----------RIGLAVLRRLAPFDVHLHYTDRHRLPESVEKEL----------------------N 234 (393)
T ss_dssp CCCTTCEEEEECCS----------HHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHH----------------------T
T ss_pred ccCCCCEEEEEeEC----------HHHHHHHHHHHhCCCEEEEEcCCccchhhHhhc----------------------C
Confidence 35789999999984 578899999999999999999986544333322 2
Q ss_pred eEEecCHHhhcccccEEEEEecCc-ccccccHHHHHHhcCCCCEEEEcCC--CCChhh
Q 011641 400 VSVVWDAYEATKDAHGVCILTEWD-EFKTLDYQRIYDNMQKPAFVFDGRN--VVDANK 454 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~~~-~~~~~~~~~~~~~~~~~~~viD~~~--~~~~~~ 454 (480)
+.+..++++.++++|+|+++++.. +-+++=-.+..+.|++.+++||+-+ +.+.+.
T Consensus 235 ~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~a 292 (393)
T 2nac_A 235 LTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDA 292 (393)
T ss_dssp CEECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHH
T ss_pred ceecCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHH
Confidence 444567899999999999998864 4444322456788988889999976 456433
No 295
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=97.17 E-value=0.00056 Score=66.96 Aligned_cols=109 Identities=17% Similarity=0.212 Sum_probs=76.5
Q ss_pred CeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceEEec
Q 011641 325 KKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVSVVW 404 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (480)
+||+++||.. ....+++.|.+.|++|.+||......+.... .+.+.++
T Consensus 4 ~kIgfIGlG~----------MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~----------------------~Ga~~a~ 51 (300)
T 3obb_A 4 KQIAFIGLGH----------MGAPMATNLLKAGYLLNVFDLVQSAVDGLVA----------------------AGASAAR 51 (300)
T ss_dssp CEEEEECCST----------THHHHHHHHHHTTCEEEEECSSHHHHHHHHH----------------------TTCEECS
T ss_pred CEEEEeeehH----------HHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH----------------------cCCEEcC
Confidence 5899999954 8899999999999999999976443322221 3467789
Q ss_pred CHHhhcccccEEEEEecCccc-ccc--cHHHHHHhcCCCCEEEEcCCCCCh------hhhhhcCcEEEEe
Q 011641 405 DAYEATKDAHGVCILTEWDEF-KTL--DYQRIYDNMQKPAFVFDGRNVVDA------NKLREIGFIVYSI 465 (480)
Q Consensus 405 ~~~~a~~~ad~vvi~t~~~~~-~~~--~~~~~~~~~~~~~~viD~~~~~~~------~~~~~~g~~y~~i 465 (480)
++.|+++++|+|+++...++- ++. ....+.+.+++..+|||+..+-.. +.+++.|+.|.--
T Consensus 52 s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~lDa 121 (300)
T 3obb_A 52 SARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDA 121 (300)
T ss_dssp SHHHHHTTCSEEEECCSCHHHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEEEC
T ss_pred CHHHHHhcCCceeecCCchHHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEec
Confidence 999999999999998776541 111 001133344556799999998753 3445678888653
No 296
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.17 E-value=0.0002 Score=66.28 Aligned_cols=73 Identities=25% Similarity=0.296 Sum_probs=49.9
Q ss_pred CcEEEEEC-CChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccC
Q 011641 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
||||.|.| .|.+|..++..|+++ |++|++++|++++.+.+..+ ..+. .+.+.-..+..++++++
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~-~~~~------------~~Dl~d~~~~~~~~~~~ 68 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNR--GFEVTAVVRHPEKIKIENEH-LKVK------------KADVSSLDEVCEVCKGA 68 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTT--TCEEEEECSCGGGCCCCCTT-EEEE------------CCCTTCHHHHHHHHTTC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEEcCcccchhccCc-eEEE------------EecCCCHHHHHHHhcCC
Confidence 58999999 599999999999998 99999999998754322110 0000 01111112344567889
Q ss_pred cEEEEeccC
Q 011641 80 DIVFVSVNT 88 (480)
Q Consensus 80 DvVii~Vpt 88 (480)
|+||-|...
T Consensus 69 d~vi~~a~~ 77 (227)
T 3dhn_A 69 DAVISAFNP 77 (227)
T ss_dssp SEEEECCCC
T ss_pred CEEEEeCcC
Confidence 999998764
No 297
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=97.16 E-value=0.0022 Score=63.62 Aligned_cols=100 Identities=15% Similarity=0.154 Sum_probs=74.9
Q ss_pred CcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccc
Q 011641 320 NTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+. .-...+++.|...|++|.+|||....+. ...+ +
T Consensus 161 ~~l~g~tvgIIGlG----------~IG~~vA~~l~~~G~~V~~~d~~~~~~~-~~~~----------------------g 207 (335)
T 2g76_A 161 TELNGKTLGILGLG----------RIGREVATRMQSFGMKTIGYDPIISPEV-SASF----------------------G 207 (335)
T ss_dssp CCCTTCEEEEECCS----------HHHHHHHHHHHTTTCEEEEECSSSCHHH-HHHT----------------------T
T ss_pred cCCCcCEEEEEeEC----------HHHHHHHHHHHHCCCEEEEECCCcchhh-hhhc----------------------C
Confidence 46789999999984 4778999999999999999999877642 2222 2
Q ss_pred eEEecCHHhhcccccEEEEEecCcc-cccccHHHHHHhcCCCCEEEEcCC--CCChh
Q 011641 400 VSVVWDAYEATKDAHGVCILTEWDE-FKTLDYQRIYDNMQKPAFVFDGRN--VVDAN 453 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~~~~-~~~~~~~~~~~~~~~~~~viD~~~--~~~~~ 453 (480)
+.+ .++++.++++|+|+++++... .+++=-.+..+.|++.+++||+-+ +.+.+
T Consensus 208 ~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~~ 263 (335)
T 2g76_A 208 VQQ-LPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEG 263 (335)
T ss_dssp CEE-CCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCHH
T ss_pred cee-CCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCHH
Confidence 333 378999999999999988853 444322456788988889999766 45644
No 298
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=97.15 E-value=0.0015 Score=64.89 Aligned_cols=97 Identities=10% Similarity=0.128 Sum_probs=67.1
Q ss_pred CcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccc
Q 011641 320 NTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+. .-...+++.|...|.+|.+|||..... ..
T Consensus 167 ~~l~gktiGIIGlG----------~IG~~vA~~l~~~G~~V~~~dr~~~~~---------------------------~~ 209 (340)
T 4dgs_A 167 HSPKGKRIGVLGLG----------QIGRALASRAEAFGMSVRYWNRSTLSG---------------------------VD 209 (340)
T ss_dssp CCCTTCEEEEECCS----------HHHHHHHHHHHTTTCEEEEECSSCCTT---------------------------SC
T ss_pred ccccCCEEEEECCC----------HHHHHHHHHHHHCCCEEEEEcCCcccc---------------------------cC
Confidence 46789999999984 478999999999999999999975431 12
Q ss_pred eEEecCHHhhcccccEEEEEecCc-ccccccHHHHHHhcCCCCEEEEcCC--CCChh
Q 011641 400 VSVVWDAYEATKDAHGVCILTEWD-EFKTLDYQRIYDNMQKPAFVFDGRN--VVDAN 453 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~~~-~~~~~~~~~~~~~~~~~~~viD~~~--~~~~~ 453 (480)
..+..+++++++++|+|+++++-. +-+.+=-.+..+.|++..++||+-+ +.|.+
T Consensus 210 ~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvde~ 266 (340)
T 4dgs_A 210 WIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDED 266 (340)
T ss_dssp CEECSSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEECSCC------
T ss_pred ceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccCHH
Confidence 345578999999999999998853 3333322456678888889999865 55544
No 299
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=97.14 E-value=0.0018 Score=64.24 Aligned_cols=97 Identities=12% Similarity=0.221 Sum_probs=73.8
Q ss_pred cCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccce
Q 011641 321 TVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+.. -+..+++.|.+.|++|.+||+....+ ....+ ++
T Consensus 143 ~l~g~~vgIIG~G~----------iG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~----------------------g~ 189 (333)
T 2d0i_A 143 SLYGKKVGILGMGA----------IGKAIARRLIPFGVKLYYWSRHRKVN-VEKEL----------------------KA 189 (333)
T ss_dssp CSTTCEEEEECCSH----------HHHHHHHHHGGGTCEEEEECSSCCHH-HHHHH----------------------TE
T ss_pred CCCcCEEEEEccCH----------HHHHHHHHHHHCCCEEEEECCCcchh-hhhhc----------------------Cc
Confidence 56889999999854 78899999999999999999987753 22222 23
Q ss_pred EEecCHHhhcccccEEEEEecCc-ccccccHHHHHHhcCCCCEEEEcCC--CCCh
Q 011641 401 SVVWDAYEATKDAHGVCILTEWD-EFKTLDYQRIYDNMQKPAFVFDGRN--VVDA 452 (480)
Q Consensus 401 ~~~~~~~~a~~~ad~vvi~t~~~-~~~~~~~~~~~~~~~~~~~viD~~~--~~~~ 452 (480)
.+. +++++++++|+|+++++.. +.+++=-+++.+.|++. +++|+-+ +.+.
T Consensus 190 ~~~-~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~srg~~vd~ 242 (333)
T 2d0i_A 190 RYM-DIDELLEKSDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIGRGALVDE 242 (333)
T ss_dssp EEC-CHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECSCGGGBCH
T ss_pred eec-CHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECCCCcccCH
Confidence 443 7888899999999999987 55554334556788877 9999865 4454
No 300
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=97.13 E-value=0.0025 Score=62.53 Aligned_cols=99 Identities=23% Similarity=0.279 Sum_probs=74.3
Q ss_pred cCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccce
Q 011641 321 TVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+. .-...+++.|...|++|.+|||....+. ...+ ++
T Consensus 139 ~l~g~~vgIiG~G----------~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~~~----------------------g~ 185 (307)
T 1wwk_A 139 ELEGKTIGIIGFG----------RIGYQVAKIANALGMNILLYDPYPNEER-AKEV----------------------NG 185 (307)
T ss_dssp CCTTCEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSSCCHHH-HHHT----------------------TC
T ss_pred ccCCceEEEEccC----------HHHHHHHHHHHHCCCEEEEECCCCChhh-Hhhc----------------------Cc
Confidence 5688999999984 4788999999999999999999887632 2222 23
Q ss_pred EEecCHHhhcccccEEEEEecCcc-cccccHHHHHHhcCCCCEEEEcCC--CCChh
Q 011641 401 SVVWDAYEATKDAHGVCILTEWDE-FKTLDYQRIYDNMQKPAFVFDGRN--VVDAN 453 (480)
Q Consensus 401 ~~~~~~~~a~~~ad~vvi~t~~~~-~~~~~~~~~~~~~~~~~~viD~~~--~~~~~ 453 (480)
.+ .++++.++++|+|+++++... .+++=-.+..+.|++..++||+-+ +++..
T Consensus 186 ~~-~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~ 240 (307)
T 1wwk_A 186 KF-VDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTN 240 (307)
T ss_dssp EE-CCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHH
T ss_pred cc-cCHHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHH
Confidence 33 378899999999999988743 444322456678888889999877 45644
No 301
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.13 E-value=0.00035 Score=65.50 Aligned_cols=68 Identities=15% Similarity=0.117 Sum_probs=49.9
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecC---HHHh-hc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTD---VEKH-VS 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d---~~~a-~~ 77 (480)
++|.|+|+|.+|..+|..|.+. |+ |+++|+++++++.+..+ ..+.. +. .++ ++++ +.
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~--g~-v~vid~~~~~~~~~~~~-~~~i~------------gd---~~~~~~l~~a~i~ 70 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGS--EV-FVLAEDENVRKKVLRSG-ANFVH------------GD---PTRVSDLEKANVR 70 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTS--EE-EEEESCGGGHHHHHHTT-CEEEE------------SC---TTCHHHHHHTTCT
T ss_pred CEEEEECCChHHHHHHHHHHhC--Ce-EEEEECCHHHHHHHhcC-CeEEE------------cC---CCCHHHHHhcCcc
Confidence 5799999999999999999987 89 99999999998887632 11110 00 012 2222 67
Q ss_pred cCcEEEEeccC
Q 011641 78 EADIVFVSVNT 88 (480)
Q Consensus 78 ~aDvVii~Vpt 88 (480)
++|.||++++.
T Consensus 71 ~ad~vi~~~~~ 81 (234)
T 2aef_A 71 GARAVIVDLES 81 (234)
T ss_dssp TCSEEEECCSC
T ss_pred hhcEEEEcCCC
Confidence 89999999763
No 302
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=97.12 E-value=0.0029 Score=62.45 Aligned_cols=74 Identities=19% Similarity=0.314 Sum_probs=52.8
Q ss_pred cEEEEECC-ChhHHHHHHHHHHcCCCC-------eEEEEECCH--HHHH----HHHcCCCCCcCCChHHHHhhhcCCCEE
Q 011641 2 VKICCIGA-GYVGGPTMAVIALKCPSI-------EVAVVDISV--SRIN----AWNSDQLPIYEPGLDGVVKQCRGKNLF 67 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~-------~V~~~D~~~--~~v~----~l~~~~~~~~e~~l~~~~~~~~~~~l~ 67 (480)
|||.|+|. |.+|.+++..|..+ |+ +|+++|+++ ++.+ .+.....++ . +.++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~--g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~------------~-~di~ 69 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAG--EMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPL------------L-AGLE 69 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTT--TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT------------E-EEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccc------------c-CCeE
Confidence 79999996 99999999999987 75 899999974 2222 222211111 0 2356
Q ss_pred EecCHHHhhccCcEEEEeccCCC
Q 011641 68 FSTDVEKHVSEADIVFVSVNTPT 90 (480)
Q Consensus 68 ~t~d~~~a~~~aDvVii~Vptp~ 90 (480)
.+++..++++++|+||.+-..+.
T Consensus 70 ~~~~~~~a~~~~D~Vih~Ag~~~ 92 (327)
T 1y7t_A 70 ATDDPKVAFKDADYALLVGAAPR 92 (327)
T ss_dssp EESCHHHHTTTCSEEEECCCCCC
T ss_pred eccChHHHhCCCCEEEECCCcCC
Confidence 66777788999999999876553
No 303
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=97.12 E-value=0.0011 Score=68.61 Aligned_cols=75 Identities=16% Similarity=0.256 Sum_probs=51.8
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
++|.|+|+|.+|..++..|++. |++|+++|+++++.+.+.+....+. .+ ...+.-..+..++++++|+
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~--G~~V~v~~R~~~~a~~la~~~~~~~------~~----~~Dv~d~~~l~~~l~~~Dv 71 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDS--GIKVTVACRTLESAKKLSAGVQHST------PI----SLDVNDDAALDAEVAKHDL 71 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTT--TCEEEEEESSHHHHHHTTTTCTTEE------EE----ECCTTCHHHHHHHHTTSSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC--cCEEEEEECCHHHHHHHHHhcCCce------EE----EeecCCHHHHHHHHcCCcE
Confidence 6799999999999999999987 8999999999998887764210000 00 0000000123455778999
Q ss_pred EEEeccC
Q 011641 82 VFVSVNT 88 (480)
Q Consensus 82 Vii~Vpt 88 (480)
||.|+|.
T Consensus 72 VIn~a~~ 78 (450)
T 1ff9_A 72 VISLIPY 78 (450)
T ss_dssp EEECCC-
T ss_pred EEECCcc
Confidence 9999874
No 304
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=97.12 E-value=0.00073 Score=67.13 Aligned_cols=34 Identities=21% Similarity=0.572 Sum_probs=29.1
Q ss_pred CcEEEEEC-CChhHHHHHHHHHHcCCCCeEEEEECC
Q 011641 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDIS 35 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~ 35 (480)
||||+|+| .|++|..+...|.++ |.+++..+..+
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~-p~~el~~l~s~ 38 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRH-PHMNITALTVS 38 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHC-TTEEEEEEEEE
T ss_pred ceEEEEECCCChHHHHHHHHHHhC-CCCcEEEEEec
Confidence 78999999 699999999999986 67888877543
No 305
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=97.12 E-value=0.00048 Score=67.81 Aligned_cols=70 Identities=23% Similarity=0.287 Sum_probs=46.1
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeE-EEEECCHHH-HHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhh---
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEV-AVVDISVSR-INAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV--- 76 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V-~~~D~~~~~-v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~--- 76 (480)
+||+|||+|++|..++..+.++.++.++ .++|+++++ ...+.+.. +....+++.++.+
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~-----------------g~~~~~~~~e~ll~~~ 67 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRM-----------------GVTTTYAGVEGLIKLP 67 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHT-----------------TCCEESSHHHHHHHSG
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHc-----------------CCCcccCCHHHHHhcc
Confidence 5899999999999999999763356664 468998776 44443210 1112234445543
Q ss_pred --ccCcEEEEeccC
Q 011641 77 --SEADIVFVSVNT 88 (480)
Q Consensus 77 --~~aDvVii~Vpt 88 (480)
.++|+||+|+|+
T Consensus 68 ~~~~iDvV~~atp~ 81 (312)
T 1nvm_B 68 EFADIDFVFDATSA 81 (312)
T ss_dssp GGGGEEEEEECSCH
T ss_pred CCCCCcEEEECCCh
Confidence 458999999773
No 306
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=97.12 E-value=0.002 Score=63.65 Aligned_cols=100 Identities=13% Similarity=0.158 Sum_probs=75.2
Q ss_pred cCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcC-CCChHHHHHhhhccccCCCCCCCCCCCCcccccc
Q 011641 321 TVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDP-QVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQ 399 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
.+.+++|+|+|+. .-...+++.|...|++|.+||| ....+. ...+ +
T Consensus 143 ~l~g~~vgIIG~G----------~IG~~~A~~l~~~G~~V~~~d~~~~~~~~-~~~~----------------------g 189 (320)
T 1gdh_A 143 KLDNKTLGIYGFG----------SIGQALAKRAQGFDMDIDYFDTHRASSSD-EASY----------------------Q 189 (320)
T ss_dssp CCTTCEEEEECCS----------HHHHHHHHHHHTTTCEEEEECSSCCCHHH-HHHH----------------------T
T ss_pred CCCCCEEEEECcC----------HHHHHHHHHHHHCCCEEEEECCCCcChhh-hhhc----------------------C
Confidence 4688999999984 4788999999999999999999 776532 2222 2
Q ss_pred eEEecCHHhhcccccEEEEEecCc-ccccccHHHHHHhcCCCCEEEEcCCC--CChh
Q 011641 400 VSVVWDAYEATKDAHGVCILTEWD-EFKTLDYQRIYDNMQKPAFVFDGRNV--VDAN 453 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~~~-~~~~~~~~~~~~~~~~~~~viD~~~~--~~~~ 453 (480)
+.+.+++++.++++|+|+++++.. +.+++=-....+.|++..++||+-+- ++.+
T Consensus 190 ~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~~ 246 (320)
T 1gdh_A 190 ATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNE 246 (320)
T ss_dssp CEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHH
T ss_pred cEEcCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCHH
Confidence 345558899999999999999874 34443224566788887899999763 5644
No 307
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.11 E-value=0.00061 Score=66.05 Aligned_cols=103 Identities=10% Similarity=0.030 Sum_probs=67.8
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCC-eEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+++.|+|+|.+|.+++..|++. |. +|++++|++++.+.+.+.. .. .+.+.+. ++++...++|
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~--G~~~v~v~~R~~~~a~~la~~~------------~~--~~~~~~~-~~~~l~~~aD 189 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQ--QPASITVTNRTFAKAEQLAELV------------AA--YGEVKAQ-AFEQLKQSYD 189 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--CCSEEEEEESSHHHHHHHHHHH------------GG--GSCEEEE-EGGGCCSCEE
T ss_pred CEEEEECchHHHHHHHHHHHhc--CCCeEEEEECCHHHHHHHHHHh------------hc--cCCeeEe-eHHHhcCCCC
Confidence 4799999999999999999998 85 9999999999988776420 00 0123332 3344337899
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHH
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
+||-|+|.....+ .+.+. ...++++.+|++.++.|.. |..+
T Consensus 190 iIInaTp~gm~~~------~~~l~---------~~~l~~~~~V~DlvY~P~~-T~ll 230 (281)
T 3o8q_A 190 VIINSTSASLDGE------LPAID---------PVIFSSRSVCYDMMYGKGY-TVFN 230 (281)
T ss_dssp EEEECSCCCC----------CSCC---------GGGEEEEEEEEESCCCSSC-CHHH
T ss_pred EEEEcCcCCCCCC------CCCCC---------HHHhCcCCEEEEecCCCcc-CHHH
Confidence 9999987653210 01110 1345678888888877644 4444
No 308
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=97.10 E-value=0.004 Score=64.42 Aligned_cols=114 Identities=12% Similarity=0.102 Sum_probs=69.0
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHH----HHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVS----RINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~----~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (480)
+||.|||+|..|.+.|..|+++ |++|+++|.++. ..+.|.+...+ +..-.+.++.+.
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~--G~~V~~~D~~~~~~~~~~~~L~~~gi~-----------------~~~g~~~~~~~~ 70 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKL--GAIVTVNDGKPFDENPTAQSLLEEGIK-----------------VVCGSHPLELLD 70 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHT--TCEEEEEESSCGGGCHHHHHHHHTTCE-----------------EEESCCCGGGGG
T ss_pred CEEEEEeeCHHHHHHHHHHHhC--CCEEEEEeCCcccCChHHHHHHhCCCE-----------------EEECCChHHhhc
Confidence 5899999999999999999998 999999999642 33444432111 222223333345
Q ss_pred c-CcEEEEeccCCCCCCCCCCCCCCChHHHHHHHH---------HHHhhCCCCcEEEEecCCCcchHHH-HHHHHHhcC
Q 011641 78 E-ADIVFVSVNTPTKTQGLGAGKAADLTYWESAAR---------VIADVSKSDKIVVEKSTVPVKTAEA-IEKILTHNS 145 (480)
Q Consensus 78 ~-aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~---------~i~~~l~~~~iVi~~STv~~gt~~~-l~~~l~~~~ 145 (480)
+ +|+||++..-|.+ ...+..+.+ ++...+.+..+|-+..|..-.||.. +..+|++.+
T Consensus 71 ~~~d~vv~spgi~~~-----------~p~~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g 138 (451)
T 3lk7_A 71 EDFCYMIKNPGIPYN-----------NPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGG 138 (451)
T ss_dssp SCEEEEEECTTSCTT-----------SHHHHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEECCcCCCC-----------ChhHHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcC
Confidence 5 8999887443321 122333222 1222223457777777776666555 567777643
No 309
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=97.10 E-value=0.00089 Score=62.47 Aligned_cols=71 Identities=17% Similarity=0.164 Sum_probs=54.4
Q ss_pred cEEEEECC-ChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCC-CCcCCChHHHHhhhcCCCEEEecCHHHhhccC
Q 011641 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQL-PIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~-~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
|+|.|.|. |.+|..++..|+++ |++|++++|++++.+.+..... .+.. +.++ .+..+++.++
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~--G~~V~~~~R~~~~~~~~~~~~~~~~~~------------~Dl~--~~~~~~~~~~ 85 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNK--GHEPVAMVRNEEQGPELRERGASDIVV------------ANLE--EDFSHAFASI 85 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHTTCSEEEE------------CCTT--SCCGGGGTTC
T ss_pred CeEEEECCCChHHHHHHHHHHhC--CCeEEEEECChHHHHHHHhCCCceEEE------------cccH--HHHHHHHcCC
Confidence 78999996 99999999999998 9999999999998887765322 2111 1111 4456678899
Q ss_pred cEEEEeccC
Q 011641 80 DIVFVSVNT 88 (480)
Q Consensus 80 DvVii~Vpt 88 (480)
|+||-+...
T Consensus 86 D~vi~~ag~ 94 (236)
T 3e8x_A 86 DAVVFAAGS 94 (236)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999998764
No 310
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=97.09 E-value=0.0017 Score=64.52 Aligned_cols=101 Identities=16% Similarity=0.163 Sum_probs=75.1
Q ss_pred cCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccce
Q 011641 321 TVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+. .-...+++.|...|++|.+|||....... +. ++
T Consensus 138 ~l~g~tvgIiG~G----------~IG~~vA~~l~~~G~~V~~~d~~~~~~~~--~~----------------------g~ 183 (334)
T 2pi1_A 138 ELNRLTLGVIGTG----------RIGSRVAMYGLAFGMKVLCYDVVKREDLK--EK----------------------GC 183 (334)
T ss_dssp CGGGSEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSSCCHHHH--HT----------------------TC
T ss_pred eccCceEEEECcC----------HHHHHHHHHHHHCcCEEEEECCCcchhhH--hc----------------------Cc
Confidence 4578999999984 47889999999999999999998765421 11 23
Q ss_pred EEecCHHhhcccccEEEEEecCc-ccccccHHHHHHhcCCCCEEEEcCC--CCChhhhh
Q 011641 401 SVVWDAYEATKDAHGVCILTEWD-EFKTLDYQRIYDNMQKPAFVFDGRN--VVDANKLR 456 (480)
Q Consensus 401 ~~~~~~~~a~~~ad~vvi~t~~~-~~~~~~~~~~~~~~~~~~~viD~~~--~~~~~~~~ 456 (480)
.+. ++++.++++|+|+++++.. +-+++=-.+..+.|++.+++||+-+ +++.+.+.
T Consensus 184 ~~~-~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~ 241 (334)
T 2pi1_A 184 VYT-SLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALY 241 (334)
T ss_dssp EEC-CHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHH
T ss_pred eec-CHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccCHHHHH
Confidence 343 5899999999999998863 4333322456678998889999875 66655443
No 311
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.09 E-value=0.005 Score=59.61 Aligned_cols=75 Identities=19% Similarity=0.236 Sum_probs=55.3
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCC-eEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEec--CHHHhhcc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFST--DVEKHVSE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~--d~~~a~~~ 78 (480)
.++.|+|+|.+|.+++..|++. |. +|++++|++++.+.+.+.. .. ......+...+ ++.+.+.+
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~--G~~~v~i~~R~~~~a~~la~~~--------~~---~~~~~~i~~~~~~~l~~~l~~ 194 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTH--GVQKLQVADLDTSRAQALADVI--------NN---AVGREAVVGVDARGIEDVIAA 194 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSSHHHHHHHHHHH--------HH---HHTSCCEEEECSTTHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHH--------Hh---hcCCceEEEcCHHHHHHHHhc
Confidence 4789999999999999999998 87 7999999999988775410 00 00011234444 67777889
Q ss_pred CcEEEEeccCC
Q 011641 79 ADIVFVSVNTP 89 (480)
Q Consensus 79 aDvVii~Vptp 89 (480)
+|+||-|+|..
T Consensus 195 ~DiVInaTp~G 205 (283)
T 3jyo_A 195 ADGVVNATPMG 205 (283)
T ss_dssp SSEEEECSSTT
T ss_pred CCEEEECCCCC
Confidence 99999997753
No 312
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.09 E-value=0.0021 Score=61.79 Aligned_cols=100 Identities=13% Similarity=0.108 Sum_probs=66.3
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhh-ccCc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV-SEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~-~~aD 80 (480)
+++.|+|+|.+|.++|..|++. |.+|++++|++++.+.+.+.... .+.+.. .+.++.. ..+|
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~--G~~V~v~~R~~~~~~~la~~~~~--------------~~~~~~-~~~~~~~~~~~D 182 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSL--DCAVTITNRTVSRAEELAKLFAH--------------TGSIQA-LSMDELEGHEFD 182 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHTGG--------------GSSEEE-CCSGGGTTCCCS
T ss_pred CEEEEECCcHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHhhc--------------cCCeeE-ecHHHhccCCCC
Confidence 5799999999999999999998 89999999999988777642100 012222 2333322 4899
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcch
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKT 133 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
+||-|+|.+...+ .+++. ...++++.++++.++.|..|
T Consensus 183 ivVn~t~~~~~~~------~~~i~---------~~~l~~~~~v~D~~y~p~~t 220 (271)
T 1nyt_A 183 LIINATSSGISGD------IPAIP---------SSLIHPGIYCYDMFYQKGKT 220 (271)
T ss_dssp EEEECCSCGGGTC------CCCCC---------GGGCCTTCEEEESCCCSSCC
T ss_pred EEEECCCCCCCCC------CCCCC---------HHHcCCCCEEEEeccCCcCC
Confidence 9999987543210 01110 12356788899888876444
No 313
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=97.07 E-value=0.00078 Score=62.08 Aligned_cols=104 Identities=12% Similarity=0.186 Sum_probs=61.8
Q ss_pred cEEEEEC-CChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEE-ecCHHHhhccC
Q 011641 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFF-STDVEKHVSEA 79 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~-t~d~~~a~~~a 79 (480)
|||.|.| .|.+|..++..|+++ |++|++++|++++.+.+ ....+. .+.+.- ..++.++++++
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~--~~~~~~------------~~D~~d~~~~~~~~~~~~ 64 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTT--DYQIYAGARKVEQVPQY--NNVKAV------------HFDVDWTPEEMAKQLHGM 64 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTS--SCEEEEEESSGGGSCCC--TTEEEE------------ECCTTSCHHHHHTTTTTC
T ss_pred CeEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCccchhhc--CCceEE------------EecccCCHHHHHHHHcCC
Confidence 7999999 799999999999998 99999999998654322 000000 011110 11234456789
Q ss_pred cEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEec
Q 011641 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKS 127 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~S 127 (480)
|+||-|....... ....++.....+++.+.+. ..+.+|..+|
T Consensus 65 d~vi~~ag~~~~~-----~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS 106 (219)
T 3dqp_A 65 DAIINVSGSGGKS-----LLKVDLYGAVKLMQAAEKA-EVKRFILLST 106 (219)
T ss_dssp SEEEECCCCTTSS-----CCCCCCHHHHHHHHHHHHT-TCCEEEEECC
T ss_pred CEEEECCcCCCCC-----cEeEeHHHHHHHHHHHHHh-CCCEEEEECc
Confidence 9999998654321 1133444444455544332 2245554444
No 314
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=97.07 E-value=0.00068 Score=63.46 Aligned_cols=74 Identities=15% Similarity=0.245 Sum_probs=48.8
Q ss_pred CcEEEEEC-CChhHHHHHHHHHHcCCC-CeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhcc
Q 011641 1 MVKICCIG-AGYVGGPTMAVIALKCPS-IEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE 78 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G-~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (480)
||+|.|.| .|.+|..++..|++. | ++|++++|++++.+.+......+. .+.++-..+.++++++
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~--G~~~V~~~~R~~~~~~~~~~~~~~~~------------~~Dl~d~~~~~~~~~~ 88 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADK--QTIKQTLFARQPAKIHKPYPTNSQII------------MGDVLNHAALKQAMQG 88 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTC--TTEEEEEEESSGGGSCSSCCTTEEEE------------ECCTTCHHHHHHHHTT
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhC--CCceEEEEEcChhhhcccccCCcEEE------------EecCCCHHHHHHHhcC
Confidence 46799999 699999999999998 8 899999999876433221110000 0111111224456788
Q ss_pred CcEEEEeccC
Q 011641 79 ADIVFVSVNT 88 (480)
Q Consensus 79 aDvVii~Vpt 88 (480)
+|+||.+.+.
T Consensus 89 ~D~vv~~a~~ 98 (236)
T 3qvo_A 89 QDIVYANLTG 98 (236)
T ss_dssp CSEEEEECCS
T ss_pred CCEEEEcCCC
Confidence 9999988653
No 315
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=97.07 E-value=0.0016 Score=64.86 Aligned_cols=98 Identities=17% Similarity=0.246 Sum_probs=74.0
Q ss_pred cCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccce
Q 011641 321 TVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+. .-...+++.|...|++|.+|||..... . . ...
T Consensus 145 ~l~gktvgIiGlG----------~IG~~vA~~l~~~G~~V~~~d~~~~~~-~-~-----------------------~~~ 189 (343)
T 2yq5_A 145 EIYNLTVGLIGVG----------HIGSAVAEIFSAMGAKVIAYDVAYNPE-F-E-----------------------PFL 189 (343)
T ss_dssp CGGGSEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSSCCGG-G-T-----------------------TTC
T ss_pred ccCCCeEEEEecC----------HHHHHHHHHHhhCCCEEEEECCChhhh-h-h-----------------------ccc
Confidence 4578999999985 477899999999999999999987542 1 1 113
Q ss_pred EEecCHHhhcccccEEEEEecCc-cccc-ccHHHHHHhcCCCCEEEEcCC--CCChhhh
Q 011641 401 SVVWDAYEATKDAHGVCILTEWD-EFKT-LDYQRIYDNMQKPAFVFDGRN--VVDANKL 455 (480)
Q Consensus 401 ~~~~~~~~a~~~ad~vvi~t~~~-~~~~-~~~~~~~~~~~~~~~viD~~~--~~~~~~~ 455 (480)
.+. ++++.++++|+|+++++.. +-+. ++ .+..+.|++.+++||+-+ +++.+.+
T Consensus 190 ~~~-~l~ell~~aDvV~l~~Plt~~t~~li~-~~~l~~mk~gailIN~aRg~~vd~~aL 246 (343)
T 2yq5_A 190 TYT-DFDTVLKEADIVSLHTPLFPSTENMIG-EKQLKEMKKSAYLINCARGELVDTGAL 246 (343)
T ss_dssp EEC-CHHHHHHHCSEEEECCCCCTTTTTCBC-HHHHHHSCTTCEEEECSCGGGBCHHHH
T ss_pred ccc-CHHHHHhcCCEEEEcCCCCHHHHHHhh-HHHHhhCCCCcEEEECCCChhhhHHHH
Confidence 333 8999999999999999863 3333 34 456678998889999976 6665544
No 316
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.07 E-value=0.00096 Score=69.37 Aligned_cols=76 Identities=16% Similarity=0.268 Sum_probs=52.6
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+++|.|+|+|.+|.+++..|++. +|++|++++|++++.+.+.+. ..+. .+ ...+.-..++.++++++|
T Consensus 23 ~k~VlIiGAGgiG~aia~~L~~~-~g~~V~v~~R~~~ka~~la~~-~~~~------~~----~~D~~d~~~l~~~l~~~D 90 (467)
T 2axq_A 23 GKNVLLLGSGFVAQPVIDTLAAN-DDINVTVACRTLANAQALAKP-SGSK------AI----SLDVTDDSALDKVLADND 90 (467)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTS-TTEEEEEEESSHHHHHHHHGG-GTCE------EE----ECCTTCHHHHHHHHHTSS
T ss_pred CCEEEEECChHHHHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHh-cCCc------EE----EEecCCHHHHHHHHcCCC
Confidence 36899999999999999999986 368999999999998887642 0000 00 000000013445577899
Q ss_pred EEEEeccC
Q 011641 81 IVFVSVNT 88 (480)
Q Consensus 81 vVii~Vpt 88 (480)
+||.|+|.
T Consensus 91 vVIn~tp~ 98 (467)
T 2axq_A 91 VVISLIPY 98 (467)
T ss_dssp EEEECSCG
T ss_pred EEEECCch
Confidence 99999774
No 317
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=97.06 E-value=0.0019 Score=64.95 Aligned_cols=104 Identities=18% Similarity=0.195 Sum_probs=77.2
Q ss_pred CcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCE-EEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCccccc
Q 011641 320 NTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKAR-LSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVK 398 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~-V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (480)
..+.+++|+|+|+. .-...+++.|...|++ |.+||+.....+....+
T Consensus 160 ~~l~g~tvgIIG~G----------~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~---------------------- 207 (364)
T 2j6i_A 160 YDIEGKTIATIGAG----------RIGYRVLERLVPFNPKELLYYDYQALPKDAEEKV---------------------- 207 (364)
T ss_dssp CCSTTCEEEEECCS----------HHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHT----------------------
T ss_pred ccCCCCEEEEECcC----------HHHHHHHHHHHhCCCcEEEEECCCccchhHHHhc----------------------
Confidence 35789999999984 5789999999999997 99999876443332222
Q ss_pred ceEEecCHHhhcccccEEEEEecCc-ccccccHHHHHHhcCCCCEEEEcCC--CCChhhh
Q 011641 399 QVSVVWDAYEATKDAHGVCILTEWD-EFKTLDYQRIYDNMQKPAFVFDGRN--VVDANKL 455 (480)
Q Consensus 399 ~~~~~~~~~~a~~~ad~vvi~t~~~-~~~~~~~~~~~~~~~~~~~viD~~~--~~~~~~~ 455 (480)
++....++++.++++|+|+++++.. +.+++=-....+.|++..++||+-+ +++.+.+
T Consensus 208 g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL 267 (364)
T 2j6i_A 208 GARRVENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGAICVAEDV 267 (364)
T ss_dssp TEEECSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHH
T ss_pred CcEecCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHH
Confidence 2445568999999999999999885 4444322456688988889999977 5665433
No 318
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=97.06 E-value=0.0035 Score=62.91 Aligned_cols=115 Identities=15% Similarity=0.236 Sum_probs=69.0
Q ss_pred cEEEEEC-CChhHHHHHHHHHHcCCCC-----eEEEEECCHH----HHH----HHHcCCCCCcCCChHHHHhhhcCCCEE
Q 011641 2 VKICCIG-AGYVGGPTMAVIALKCPSI-----EVAVVDISVS----RIN----AWNSDQLPIYEPGLDGVVKQCRGKNLF 67 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~-----~V~~~D~~~~----~v~----~l~~~~~~~~e~~l~~~~~~~~~~~l~ 67 (480)
+||+||| +|.+|.++|-.++.. +. ++.++|.+.+ +++ .|+....++. ...+
T Consensus 33 ~KV~ViGAaG~VG~~la~~l~~~--~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~-------------~~v~ 97 (375)
T 7mdh_A 33 VNIAVSGAAGMISNHLLFKLASG--EVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLL-------------REVS 97 (375)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT--TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-------------EEEE
T ss_pred CEEEEECCCChHHHHHHHHHHcC--CcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhc-------------CCcE
Confidence 6899999 799999999999876 32 2777665432 222 2332221210 1356
Q ss_pred EecCHHHhhccCcEEEEeccCCCCCCCCCCCCCCCh-----HHHHHHHHHHHhhCCCCcEEEEecCCCcchHHH
Q 011641 68 FSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARVIADVSKSDKIVVEKSTVPVKTAEA 136 (480)
Q Consensus 68 ~t~d~~~a~~~aDvVii~Vptp~~~~~~~~~~~~d~-----~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~ 136 (480)
.+++..+++++||+||++-..|.... ..+.|+ +.+++..+.|.++..++.+|++ -|.|..+.-.
T Consensus 98 i~~~~y~~~~daDvVVitag~prkpG----~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlV-vsNPvD~~t~ 166 (375)
T 7mdh_A 98 IGIDPYEVFEDVDWALLIGAKPRGPG----MERAALLDINGQIFADQGKALNAVASKNVKVLV-VGNPCNTNAL 166 (375)
T ss_dssp EESCHHHHTTTCSEEEECCCCCCCTT----CCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEE-CSSSHHHHHH
T ss_pred EecCCHHHhCCCCEEEEcCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE-ecCchhHHHH
Confidence 66666677999999999876664331 112232 3344555566666455666554 3467665433
No 319
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=97.04 E-value=0.0019 Score=68.27 Aligned_cols=100 Identities=15% Similarity=0.177 Sum_probs=75.7
Q ss_pred CcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccc
Q 011641 320 NTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+.- -...+++.|.+.|.+|.+|||..+.+.. ..+ +
T Consensus 138 ~~l~g~~vgIIG~G~----------IG~~vA~~l~~~G~~V~~~d~~~~~~~a-~~~----------------------g 184 (529)
T 1ygy_A 138 TEIFGKTVGVVGLGR----------IGQLVAQRIAAFGAYVVAYDPYVSPARA-AQL----------------------G 184 (529)
T ss_dssp CCCTTCEEEEECCSH----------HHHHHHHHHHTTTCEEEEECTTSCHHHH-HHH----------------------T
T ss_pred cccCCCEEEEEeeCH----------HHHHHHHHHHhCCCEEEEECCCCChhHH-Hhc----------------------C
Confidence 357889999999854 7789999999999999999998765432 222 2
Q ss_pred eEEecCHHhhcccccEEEEEecCc-ccccccHHHHHHhcCCCCEEEEcCC--CCChh
Q 011641 400 VSVVWDAYEATKDAHGVCILTEWD-EFKTLDYQRIYDNMQKPAFVFDGRN--VVDAN 453 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~~~-~~~~~~~~~~~~~~~~~~~viD~~~--~~~~~ 453 (480)
+... +++++++++|+|+++++.. +.+++=-+.+...|++..+|+|+-+ +.+..
T Consensus 185 ~~~~-~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~ 240 (529)
T 1ygy_A 185 IELL-SLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEA 240 (529)
T ss_dssp CEEC-CHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHH
T ss_pred cEEc-CHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHH
Confidence 3444 7889999999999999886 5555433456778887789999865 44543
No 320
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=97.02 E-value=0.0031 Score=62.02 Aligned_cols=100 Identities=12% Similarity=0.147 Sum_probs=74.6
Q ss_pred CcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccc
Q 011641 320 NTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+. .-...+++.|...|++|.+|||...... ...+ +
T Consensus 138 ~~l~g~~vgIIG~G----------~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~~~----------------------g 184 (313)
T 2ekl_A 138 LELAGKTIGIVGFG----------RIGTKVGIIANAMGMKVLAYDILDIREK-AEKI----------------------N 184 (313)
T ss_dssp CCCTTCEEEEESCS----------HHHHHHHHHHHHTTCEEEEECSSCCHHH-HHHT----------------------T
T ss_pred CCCCCCEEEEEeeC----------HHHHHHHHHHHHCCCEEEEECCCcchhH-HHhc----------------------C
Confidence 35789999999984 4788999999999999999999877642 2222 2
Q ss_pred eEEecCHHhhcccccEEEEEecCcc-cccccHHHHHHhcCCCCEEEEcCC--CCChh
Q 011641 400 VSVVWDAYEATKDAHGVCILTEWDE-FKTLDYQRIYDNMQKPAFVFDGRN--VVDAN 453 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~~~~-~~~~~~~~~~~~~~~~~~viD~~~--~~~~~ 453 (480)
+.+ .++++.++++|+|+++++... .+++=-+...+.|++..++||+-+ +.+.+
T Consensus 185 ~~~-~~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~ 240 (313)
T 2ekl_A 185 AKA-VSLEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGK 240 (313)
T ss_dssp CEE-CCHHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHH
T ss_pred cee-cCHHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHH
Confidence 333 378899999999999998744 444322456678888789999866 45644
No 321
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.01 E-value=0.00053 Score=71.24 Aligned_cols=41 Identities=27% Similarity=0.449 Sum_probs=39.0
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS 44 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~ 44 (480)
|||.|+|+|.+|..+|..|... ||+|+++|.|+++++.+.+
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~--~~~v~vId~d~~~~~~~~~ 44 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGE--NNDITIVDKDGDRLRELQD 44 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCST--TEEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHH
Confidence 9999999999999999999987 9999999999999998875
No 322
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=97.01 E-value=0.0021 Score=62.50 Aligned_cols=65 Identities=18% Similarity=0.169 Sum_probs=48.6
Q ss_pred cEEEEECC-ChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc--c
Q 011641 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS--E 78 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--~ 78 (480)
+||+|+|+ |.||..++..+.+. |++ .++++|+.+. +. .. .++.+..+++++.+ .
T Consensus 8 ~rVaViG~sG~~G~~~~~~l~~~--g~~-~V~~V~p~~~-----g~-~~--------------~G~~vy~sl~el~~~~~ 64 (288)
T 2nu8_A 8 TKVICQGFTGSQGTFHSEQAIAY--GTK-MVGGVTPGKG-----GT-TH--------------LGLPVFNTVREAVAATG 64 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--TCE-EEEEECTTCT-----TC-EE--------------TTEEEESSHHHHHHHHC
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCe-EEEEeCCCcc-----cc-ee--------------CCeeccCCHHHHhhcCC
Confidence 68999998 99999999999987 888 4456665321 10 00 24677888888777 8
Q ss_pred CcEEEEeccCC
Q 011641 79 ADIVFVSVNTP 89 (480)
Q Consensus 79 aDvVii~Vptp 89 (480)
+|++++|+|.+
T Consensus 65 ~D~viI~tP~~ 75 (288)
T 2nu8_A 65 ATASVIYVPAP 75 (288)
T ss_dssp CCEEEECCCGG
T ss_pred CCEEEEecCHH
Confidence 99999998854
No 323
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=96.99 E-value=0.0013 Score=64.52 Aligned_cols=110 Identities=10% Similarity=0.054 Sum_probs=77.7
Q ss_pred CCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceEE
Q 011641 323 SNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVSV 402 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (480)
+-.+|+|+|+.. ....++..|.+.|.+|.+||+.....+...+ .++..
T Consensus 20 ~m~~I~iIG~G~----------mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~----------------------~g~~~ 67 (310)
T 3doj_A 20 HMMEVGFLGLGI----------MGKAMSMNLLKNGFKVTVWNRTLSKCDELVE----------------------HGASV 67 (310)
T ss_dssp CSCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSSGGGGHHHHH----------------------TTCEE
T ss_pred cCCEEEEECccH----------HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH----------------------CCCeE
Confidence 446999999865 8899999999999999999987554332222 23567
Q ss_pred ecCHHhhcccccEEEEEecCcc-ccccc--HHHHHHhcCCCCEEEEcCCCCChh------hhhhcCcEEEE
Q 011641 403 VWDAYEATKDAHGVCILTEWDE-FKTLD--YQRIYDNMQKPAFVFDGRNVVDAN------KLREIGFIVYS 464 (480)
Q Consensus 403 ~~~~~~a~~~ad~vvi~t~~~~-~~~~~--~~~~~~~~~~~~~viD~~~~~~~~------~~~~~g~~y~~ 464 (480)
..++.++++++|+|++++..+. .++.- .+.+...+++..+|+|+.++.... .+.+.|..|..
T Consensus 68 ~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~ 138 (310)
T 3doj_A 68 CESPAEVIKKCKYTIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVE 138 (310)
T ss_dssp CSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCHHHHHHhCCEEEEEcCCHHHHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 7899999999999999997753 22211 023445566667999998876432 23355777754
No 324
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=96.99 E-value=0.0014 Score=63.92 Aligned_cols=65 Identities=12% Similarity=0.224 Sum_probs=44.2
Q ss_pred CcEEEEECCChhHHHHHHHHHHc--CCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALK--CPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~--~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (480)
++||+|||+|.||...+..+... .++.+++ ++|++.. .+ ..++. .+|+++.++
T Consensus 7 ~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~-----a~------------------~~g~~-~~~~~ell~ 62 (294)
T 1lc0_A 7 KFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRREL-----GS------------------LDEVR-QISLEDALR 62 (294)
T ss_dssp SEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCC-----CE------------------ETTEE-BCCHHHHHH
T ss_pred cceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHH-----HH------------------HcCCC-CCCHHHHhc
Confidence 36899999999999999888651 1356665 5666420 00 01233 368888775
Q ss_pred --cCcEEEEeccCC
Q 011641 78 --EADIVFVSVNTP 89 (480)
Q Consensus 78 --~aDvVii~Vptp 89 (480)
+.|+|++|+|+.
T Consensus 63 ~~~vD~V~i~tp~~ 76 (294)
T 1lc0_A 63 SQEIDVAYICSESS 76 (294)
T ss_dssp CSSEEEEEECSCGG
T ss_pred CCCCCEEEEeCCcH
Confidence 689999998754
No 325
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=96.98 E-value=0.0026 Score=63.08 Aligned_cols=93 Identities=9% Similarity=0.126 Sum_probs=71.7
Q ss_pred CcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccc
Q 011641 320 NTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+.- -...+++.|...|.+|.+||+..... .+
T Consensus 160 ~~l~g~~vgIIG~G~----------iG~~vA~~l~~~G~~V~~~dr~~~~~---------------------------~g 202 (333)
T 3ba1_A 160 TKFSGKRVGIIGLGR----------IGLAVAERAEAFDCPISYFSRSKKPN---------------------------TN 202 (333)
T ss_dssp CCCTTCCEEEECCSH----------HHHHHHHHHHTTTCCEEEECSSCCTT---------------------------CC
T ss_pred cccCCCEEEEECCCH----------HHHHHHHHHHHCCCEEEEECCCchhc---------------------------cC
Confidence 367889999999854 78999999999999999999875421 02
Q ss_pred eEEecCHHhhcccccEEEEEecCc-ccccccHHHHHHhcCCCCEEEEcCCC
Q 011641 400 VSVVWDAYEATKDAHGVCILTEWD-EFKTLDYQRIYDNMQKPAFVFDGRNV 449 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~~~-~~~~~~~~~~~~~~~~~~~viD~~~~ 449 (480)
.....+++++++++|+|+++++.. +.+.+=-.+..+.|++..+|||+-+-
T Consensus 203 ~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG 253 (333)
T 3ba1_A 203 YTYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRG 253 (333)
T ss_dssp SEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCG
T ss_pred ceecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCC
Confidence 334568899999999999999874 45553224556788877799998773
No 326
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=96.95 E-value=0.0027 Score=64.71 Aligned_cols=98 Identities=12% Similarity=0.089 Sum_probs=74.6
Q ss_pred CcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccc
Q 011641 320 NTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+. .-...+++.|...|.+|.+|||..... ...
T Consensus 141 ~el~gktlGiIGlG----------~IG~~vA~~l~~~G~~V~~~d~~~~~~--------------------------~~~ 184 (404)
T 1sc6_A 141 FEARGKKLGIIGYG----------HIGTQLGILAESLGMYVYFYDIENKLP--------------------------LGN 184 (404)
T ss_dssp CCSTTCEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSSCCCC--------------------------CTT
T ss_pred cccCCCEEEEEeEC----------HHHHHHHHHHHHCCCEEEEEcCCchhc--------------------------cCC
Confidence 35789999999985 478899999999999999999964321 012
Q ss_pred eEEecCHHhhcccccEEEEEecCc-ccccccHHHHHHhcCCCCEEEEcCC--CCChh
Q 011641 400 VSVVWDAYEATKDAHGVCILTEWD-EFKTLDYQRIYDNMQKPAFVFDGRN--VVDAN 453 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~~~-~~~~~~~~~~~~~~~~~~~viD~~~--~~~~~ 453 (480)
+....++++.++.+|+|+++++.. +-+++=-.+..+.|++..++||+-+ +.+.+
T Consensus 185 ~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd~~ 241 (404)
T 1sc6_A 185 ATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIP 241 (404)
T ss_dssp CEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCHH
T ss_pred ceecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHhHH
Confidence 445668999999999999999885 3444322456678998889999976 55644
No 327
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=96.94 E-value=0.0003 Score=65.34 Aligned_cols=67 Identities=19% Similarity=0.374 Sum_probs=44.2
Q ss_pred cEEEEECCChhHHHHHHH--HHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhcc
Q 011641 2 VKICCIGAGYVGGPTMAV--IALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~--La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (480)
++|+|||+|.+|..+|.. +... |++++ ++|.|++++.....+ . .+...+++++.++.
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~--g~~iVg~~D~dp~k~g~~i~g-v-----------------~V~~~~dl~eli~~ 145 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNN--NTKISMAFDINESKIGTEVGG-V-----------------PVYNLDDLEQHVKD 145 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC--------CCEEEEEESCTTTTTCEETT-E-----------------EEEEGGGHHHHCSS
T ss_pred CEEEEEccCHHHHHHHHHHhcccC--CcEEEEEEeCCHHHHHhHhcC-C-----------------eeechhhHHHHHHh
Confidence 579999999999999994 3333 77765 679998865332211 0 13345677777765
Q ss_pred CcEEEEeccC
Q 011641 79 ADIVFVSVNT 88 (480)
Q Consensus 79 aDvVii~Vpt 88 (480)
.|++++|+|+
T Consensus 146 ~D~ViIAvPs 155 (215)
T 2vt3_A 146 ESVAILTVPA 155 (215)
T ss_dssp CCEEEECSCH
T ss_pred CCEEEEecCc
Confidence 6999999884
No 328
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=96.91 E-value=0.0034 Score=54.01 Aligned_cols=106 Identities=15% Similarity=0.074 Sum_probs=73.6
Q ss_pred CCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceEE
Q 011641 323 SNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVSV 402 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (480)
+.++|+|+|++-++ ++.+..+++.|.+.|++|...||.... + .++..
T Consensus 13 ~p~~IavIGaS~~~------g~~G~~~~~~L~~~G~~V~~vnp~~~~--i-------------------------~G~~~ 59 (138)
T 1y81_A 13 EFRKIALVGASKNP------AKYGNIILKDLLSKGFEVLPVNPNYDE--I-------------------------EGLKC 59 (138)
T ss_dssp -CCEEEEETCCSCT------TSHHHHHHHHHHHTTCEEEEECTTCSE--E-------------------------TTEEC
T ss_pred CCCeEEEEeecCCC------CCHHHHHHHHHHHCCCEEEEeCCCCCe--E-------------------------CCeee
Confidence 56799999998766 578899999999999999999997421 1 23556
Q ss_pred ecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCCCChh---hhhhcCcEEEE
Q 011641 403 VWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNVVDAN---KLREIGFIVYS 464 (480)
Q Consensus 403 ~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~~~~~---~~~~~g~~y~~ 464 (480)
..|+.+..+..|+++++++-+.-.+ -..++.+ ...+.++++.... ..+ ..++.|++|.|
T Consensus 60 ~~s~~el~~~vDlvii~vp~~~v~~-v~~~~~~-~g~~~i~~~~~~~-~~~l~~~a~~~Gi~~ig 121 (138)
T 1y81_A 60 YRSVRELPKDVDVIVFVVPPKVGLQ-VAKEAVE-AGFKKLWFQPGAE-SEEIRRFLEKAGVEYSF 121 (138)
T ss_dssp BSSGGGSCTTCCEEEECSCHHHHHH-HHHHHHH-TTCCEEEECTTSC-CHHHHHHHHHHTCEEEC
T ss_pred cCCHHHhCCCCCEEEEEeCHHHHHH-HHHHHHH-cCCCEEEEcCccH-HHHHHHHHHHCCCEEEc
Confidence 6788888888999999998432222 1233444 3445578887654 432 34567888855
No 329
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=96.91 E-value=0.0035 Score=62.23 Aligned_cols=42 Identities=14% Similarity=0.174 Sum_probs=33.2
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEE-EC--CHHHHHHHHc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVV-DI--SVSRINAWNS 44 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~-D~--~~~~v~~l~~ 44 (480)
+||||+|.|++|..++..|.++ ++.+|.++ |+ +++....+.+
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~-~~vevvaI~d~~~~~~~~a~l~~ 48 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNS-GKVDIVAINDPFIDLNYMVYMFQ 48 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-CSSEEEEEECSSSCHHHHHHHHH
T ss_pred eEEEEEccCHHHHHHHHHHHcC-CCcEEEEecCCCCCHHHHHHHhh
Confidence 4999999999999999998876 57887755 53 7777766553
No 330
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=96.90 E-value=0.0029 Score=65.50 Aligned_cols=88 Identities=22% Similarity=0.135 Sum_probs=63.9
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
+++.|+|+|.+|..+|..|+.. |.+|+++|+++.+.+..... ... ..+.++++..+|+
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~--GA~Viv~D~~~~~a~~Aa~~-------------------g~d-v~~lee~~~~aDv 323 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQA--GARVIVTEIDPICALQATME-------------------GLQ-VLTLEDVVSEADI 323 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT-------------------TCE-ECCGGGTTTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHh-------------------CCc-cCCHHHHHHhcCE
Confidence 4789999999999999999998 99999999999876654431 122 2456677889999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecC
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST 128 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST 128 (480)
++.+.+++.- .+ ......++++.+|++.+-
T Consensus 324 Vi~atG~~~v---------l~--------~e~l~~mk~gaiVvNaG~ 353 (488)
T 3ond_A 324 FVTTTGNKDI---------IM--------LDHMKKMKNNAIVCNIGH 353 (488)
T ss_dssp EEECSSCSCS---------BC--------HHHHTTSCTTEEEEESSS
T ss_pred EEeCCCChhh---------hh--------HHHHHhcCCCeEEEEcCC
Confidence 9988654321 11 223456788888887553
No 331
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=96.90 E-value=0.0019 Score=63.80 Aligned_cols=103 Identities=8% Similarity=0.052 Sum_probs=74.7
Q ss_pred CcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccc
Q 011641 320 NTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+. .-...+++.|...|++|.+||+.....+. ...
T Consensus 133 ~~l~gktvGIiGlG----------~IG~~vA~~l~~~G~~V~~~dr~~~~~~~------------------------~~~ 178 (324)
T 3evt_A 133 STLTGQQLLIYGTG----------QIGQSLAAKASALGMHVIGVNTTGHPADH------------------------FHE 178 (324)
T ss_dssp CCSTTCEEEEECCS----------HHHHHHHHHHHHTTCEEEEEESSCCCCTT------------------------CSE
T ss_pred ccccCCeEEEECcC----------HHHHHHHHHHHhCCCEEEEECCCcchhHh------------------------Hhh
Confidence 46789999999984 47899999999999999999987543210 011
Q ss_pred eEEecCHHhhcccccEEEEEecCc-ccccccHHHHHHhcCCCCEEEEcCC--CCChhhhh
Q 011641 400 VSVVWDAYEATKDAHGVCILTEWD-EFKTLDYQRIYDNMQKPAFVFDGRN--VVDANKLR 456 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~~~-~~~~~~~~~~~~~~~~~~~viD~~~--~~~~~~~~ 456 (480)
.....++++.++++|+|+++++-. +-+++=-.+..+.|++.+++||+-+ +.+.+.+.
T Consensus 179 ~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~ 238 (324)
T 3evt_A 179 TVAFTATADALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDTTALM 238 (324)
T ss_dssp EEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHH
T ss_pred ccccCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHH
Confidence 122357889999999999998863 3344322456778988889999976 66655433
No 332
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=96.86 E-value=0.0032 Score=64.15 Aligned_cols=99 Identities=18% Similarity=0.157 Sum_probs=72.1
Q ss_pred cCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccce
Q 011641 321 TVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+. .-...+++.|...|++|.+|||..... ....
T Consensus 153 el~gktvGIIGlG----------~IG~~vA~~l~~~G~~V~~yd~~~~~~--------------------------~~~~ 196 (416)
T 3k5p_A 153 EVRGKTLGIVGYG----------NIGSQVGNLAESLGMTVRYYDTSDKLQ--------------------------YGNV 196 (416)
T ss_dssp CSTTCEEEEECCS----------HHHHHHHHHHHHTTCEEEEECTTCCCC--------------------------BTTB
T ss_pred cCCCCEEEEEeeC----------HHHHHHHHHHHHCCCEEEEECCcchhc--------------------------ccCc
Confidence 3578999999984 478899999999999999999863211 0123
Q ss_pred EEecCHHhhcccccEEEEEecCcc-cccccHHHHHHhcCCCCEEEEcCC--CCChhhh
Q 011641 401 SVVWDAYEATKDAHGVCILTEWDE-FKTLDYQRIYDNMQKPAFVFDGRN--VVDANKL 455 (480)
Q Consensus 401 ~~~~~~~~a~~~ad~vvi~t~~~~-~~~~~~~~~~~~~~~~~~viD~~~--~~~~~~~ 455 (480)
....++++.++.+|+|+++++..+ -+++=-.+..+.|++.+++||+.+ +.|.+.+
T Consensus 197 ~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL 254 (416)
T 3k5p_A 197 KPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDLEAL 254 (416)
T ss_dssp EECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCHHHH
T ss_pred EecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhHHHH
Confidence 456789999999999999988733 333322456678998889999876 5665443
No 333
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=96.85 E-value=0.0037 Score=62.05 Aligned_cols=101 Identities=18% Similarity=0.204 Sum_probs=75.9
Q ss_pred CcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccc
Q 011641 320 NTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+. .-...+++.|..-|.+|.+|||...+.... ..
T Consensus 137 ~~l~g~tvGIiG~G----------~IG~~va~~~~~fg~~v~~~d~~~~~~~~~------------------------~~ 182 (334)
T 3kb6_A 137 RELNRLTLGVIGTG----------RIGSRVAMYGLAFGMKVLCYDVVKREDLKE------------------------KG 182 (334)
T ss_dssp CCGGGSEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSSCCHHHHH------------------------TT
T ss_pred ceecCcEEEEECcc----------hHHHHHHHhhcccCceeeecCCccchhhhh------------------------cC
Confidence 35678999999975 467899999999999999999986653221 12
Q ss_pred eEEecCHHhhcccccEEEEEecCc-cccc-ccHHHHHHhcCCCCEEEEcCC--CCChhhhh
Q 011641 400 VSVVWDAYEATKDAHGVCILTEWD-EFKT-LDYQRIYDNMQKPAFVFDGRN--VVDANKLR 456 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~~~-~~~~-~~~~~~~~~~~~~~~viD~~~--~~~~~~~~ 456 (480)
.. ..++++.++.+|+|+++++.. +-++ ++-+. .+.|++.+++|.+-+ ++|.+.+-
T Consensus 183 ~~-~~~l~ell~~sDivslh~Plt~~T~~li~~~~-l~~mk~~a~lIN~aRG~iVde~aL~ 241 (334)
T 3kb6_A 183 CV-YTSLDELLKESDVISLHVPYTKETHHMINEER-ISLMKDGVYLINTARGKVVDTDALY 241 (334)
T ss_dssp CE-ECCHHHHHHHCSEEEECCCCCTTTTTCBCHHH-HHHSCTTEEEEECSCGGGBCHHHHH
T ss_pred ce-ecCHHHHHhhCCEEEEcCCCChhhccCcCHHH-HhhcCCCeEEEecCccccccHHHHH
Confidence 23 357899999999999998873 3334 55554 568998889999866 88876544
No 334
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=96.84 E-value=0.0011 Score=65.69 Aligned_cols=73 Identities=10% Similarity=0.084 Sum_probs=47.5
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEE-EEECCH-HHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc-
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISV-SRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS- 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~-~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~- 77 (480)
|+||+|||+|.+|...+..| . ++.+|+ ++|+++ ++.+.+.+. .++. .-..+..+|+++.++
T Consensus 2 ~~rvgiiG~G~~~~~~~~~l-~--~~~~lvav~d~~~~~~~~~~~~~------------~~~~-~~~~~~~~~~~~ll~~ 65 (337)
T 3ip3_A 2 SLKICVIGSSGHFRYALEGL-D--EECSITGIAPGVPEEDLSKLEKA------------ISEM-NIKPKKYNNWWEMLEK 65 (337)
T ss_dssp CEEEEEECSSSCHHHHHTTC-C--TTEEEEEEECSSTTCCCHHHHHH------------HHTT-TCCCEECSSHHHHHHH
T ss_pred ceEEEEEccchhHHHHHHhc-C--CCcEEEEEecCCchhhHHHHHHH------------HHHc-CCCCcccCCHHHHhcC
Confidence 46999999999988777766 3 378876 588887 333332210 0000 001356788888775
Q ss_pred -cCcEEEEeccCC
Q 011641 78 -EADIVFVSVNTP 89 (480)
Q Consensus 78 -~aDvVii~Vptp 89 (480)
+.|+|+||+|+.
T Consensus 66 ~~vD~V~I~tp~~ 78 (337)
T 3ip3_A 66 EKPDILVINTVFS 78 (337)
T ss_dssp HCCSEEEECSSHH
T ss_pred CCCCEEEEeCCcc
Confidence 589999997753
No 335
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=96.83 E-value=0.0038 Score=59.79 Aligned_cols=72 Identities=17% Similarity=0.311 Sum_probs=55.2
Q ss_pred cEEEEECCC-hhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGAG-YVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGlG-~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.++.|||.| .+|.++|..|... |..|+++++. +.++++.++.||
T Consensus 151 k~vvVvG~s~iVG~plA~lL~~~--gAtVtv~~~~---------------------------------t~~L~~~~~~AD 195 (276)
T 3ngx_A 151 NTVTIVNRSPVVGRPLSMMLLNR--NYTVSVCHSK---------------------------------TKDIGSMTRSSK 195 (276)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT--TCEEEEECTT---------------------------------CSCHHHHHHHSS
T ss_pred CEEEEEcCChHHHHHHHHHHHHC--CCeEEEEeCC---------------------------------cccHHHhhccCC
Confidence 479999987 5899999999998 8999998752 235567789999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecC
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST 128 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST 128 (480)
+||.+++.|... . ...++++.+||+.++
T Consensus 196 IVI~Avg~p~~I---------~-----------~~~vk~GavVIDvgi 223 (276)
T 3ngx_A 196 IVVVAVGRPGFL---------N-----------REMVTPGSVVIDVGI 223 (276)
T ss_dssp EEEECSSCTTCB---------C-----------GGGCCTTCEEEECCC
T ss_pred EEEECCCCCccc---------c-----------HhhccCCcEEEEecc
Confidence 999999876321 1 134688998887543
No 336
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=96.83 E-value=0.0013 Score=63.41 Aligned_cols=104 Identities=10% Similarity=0.080 Sum_probs=65.2
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc-cCc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS-EAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-~aD 80 (480)
++|.|+|+|.+|.++|..|++. |.+|++++|++++.+.+.+.. .. .+.+.+ .+.++..+ .+|
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~--G~~v~v~~R~~~~a~~l~~~~------------~~--~~~~~~-~~~~~~~~~~~D 182 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQA--QQNIVLANRTFSKTKELAERF------------QP--YGNIQA-VSMDSIPLQTYD 182 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHT--TCEEEEEESSHHHHHHHHHHH------------GG--GSCEEE-EEGGGCCCSCCS
T ss_pred CEEEEECCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHc------------cc--cCCeEE-eeHHHhccCCCC
Confidence 5799999999999999999998 899999999999888776410 00 012322 23333223 899
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHH
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
+||-|+|.+...+ .+++. . ..++++.+|++.++.|...+..+
T Consensus 183 ivIn~t~~~~~~~------~~~i~------~---~~l~~~~~v~D~~y~p~~~t~ll 224 (272)
T 1p77_A 183 LVINATSAGLSGG------TASVD------A---EILKLGSAFYDMQYAKGTDTPFI 224 (272)
T ss_dssp EEEECCCC-------------CCC------H---HHHHHCSCEEESCCCTTSCCHHH
T ss_pred EEEECCCCCCCCC------CCCCC------H---HHcCCCCEEEEeeCCCCcCCHHH
Confidence 9999987543210 00110 0 11235678888888766524433
No 337
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=96.81 E-value=0.0031 Score=61.94 Aligned_cols=108 Identities=16% Similarity=0.096 Sum_probs=78.7
Q ss_pred CCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCC-EEEEEcCCC--ChHHHHHhhhccccCCCCCCCCCCCCcccccce
Q 011641 324 NKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKA-RLSIYDPQV--TEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQV 400 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~-~V~~~DP~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
..+|+|+|+.. ....++..|.+.|. +|.+||+.. ...+...+ .++
T Consensus 24 ~~~I~iIG~G~----------mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~----------------------~g~ 71 (312)
T 3qsg_A 24 AMKLGFIGFGE----------AASAIASGLRQAGAIDMAAYDAASAESWRPRAEE----------------------LGV 71 (312)
T ss_dssp -CEEEEECCSH----------HHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHH----------------------TTC
T ss_pred CCEEEEECccH----------HHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHH----------------------CCC
Confidence 45899999865 78999999999999 999999863 22221111 246
Q ss_pred EEecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCCCCh------hhhhhc--CcEEEE
Q 011641 401 SVVWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNVVDA------NKLREI--GFIVYS 464 (480)
Q Consensus 401 ~~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~~~~------~~~~~~--g~~y~~ 464 (480)
....++.++++++|+|+++++-+...+ -.+.+...+++..+|||...+... +.+.+. |..|..
T Consensus 72 ~~~~~~~e~~~~aDvVi~~vp~~~~~~-~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd 142 (312)
T 3qsg_A 72 SCKASVAEVAGECDVIFSLVTAQAALE-VAQQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAA 142 (312)
T ss_dssp EECSCHHHHHHHCSEEEECSCTTTHHH-HHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEE
T ss_pred EEeCCHHHHHhcCCEEEEecCchhHHH-HHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEe
Confidence 677899999999999999998877554 245677777666799999887653 223344 777754
No 338
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=96.79 E-value=0.0014 Score=63.38 Aligned_cols=108 Identities=7% Similarity=0.015 Sum_probs=75.8
Q ss_pred CeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceEEec
Q 011641 325 KKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVSVVW 404 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (480)
.||+|+|+.. ....++..|.+.|.+|.+||+.....+.... .++...+
T Consensus 2 ~~I~iiG~G~----------mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~----------------------~g~~~~~ 49 (287)
T 3pdu_A 2 TTYGFLGLGI----------MGGPMAANLVRAGFDVTVWNRNPAKCAPLVA----------------------LGARQAS 49 (287)
T ss_dssp CCEEEECCST----------THHHHHHHHHHHTCCEEEECSSGGGGHHHHH----------------------HTCEECS
T ss_pred CeEEEEccCH----------HHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH----------------------CCCeecC
Confidence 3799999855 7899999999999999999987554332221 2356778
Q ss_pred CHHhhcccccEEEEEecCc-ccccccH--HHHHHhcCCCCEEEEcCCCCChh------hhhhcCcEEEE
Q 011641 405 DAYEATKDAHGVCILTEWD-EFKTLDY--QRIYDNMQKPAFVFDGRNVVDAN------KLREIGFIVYS 464 (480)
Q Consensus 405 ~~~~a~~~ad~vvi~t~~~-~~~~~~~--~~~~~~~~~~~~viD~~~~~~~~------~~~~~g~~y~~ 464 (480)
++.++++++|+|+++++.+ ..++.-. +.+...+++..+|+|+....... .+.+.|..|..
T Consensus 50 ~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~ 118 (287)
T 3pdu_A 50 SPAEVCAACDITIAMLADPAAAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLE 118 (287)
T ss_dssp CHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHcCCEEEEEcCCHHHHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 9999999999999999876 3332110 23445566667999998865421 22345777754
No 339
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=96.78 E-value=0.0023 Score=62.32 Aligned_cols=107 Identities=18% Similarity=0.233 Sum_probs=74.2
Q ss_pred CeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceEEec
Q 011641 325 KKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVSVVW 404 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (480)
.||+|+|+.. ....++..|.+.|.+|.+||+.....+...+ .++....
T Consensus 4 ~~I~iiG~G~----------mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~----------------------~g~~~~~ 51 (302)
T 2h78_A 4 KQIAFIGLGH----------MGAPMATNLLKAGYLLNVFDLVQSAVDGLVA----------------------AGASAAR 51 (302)
T ss_dssp CEEEEECCST----------THHHHHHHHHHTTCEEEEECSSHHHHHHHHH----------------------TTCEECS
T ss_pred CEEEEEeecH----------HHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH----------------------CCCeEcC
Confidence 5899999865 7899999999999999999986443222111 2466778
Q ss_pred CHHhhcccccEEEEEecCcc-cccccHH---HHHHhcCCCCEEEEcCCCCChh------hhhhcCcEEEE
Q 011641 405 DAYEATKDAHGVCILTEWDE-FKTLDYQ---RIYDNMQKPAFVFDGRNVVDAN------KLREIGFIVYS 464 (480)
Q Consensus 405 ~~~~a~~~ad~vvi~t~~~~-~~~~~~~---~~~~~~~~~~~viD~~~~~~~~------~~~~~g~~y~~ 464 (480)
++.++++++|+|+++++.+. .+.. .. .+...+++..+|+|..+..... .+.+.|..|..
T Consensus 52 ~~~~~~~~aDvvi~~vp~~~~~~~v-~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~~~~ 120 (302)
T 2h78_A 52 SARDAVQGADVVISMLPASQHVEGL-YLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLD 120 (302)
T ss_dssp SHHHHHTTCSEEEECCSCHHHHHHH-HHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHhCCCeEEEECCCHHHHHHH-HcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 99999999999999997553 2221 11 3344566667999988766432 12344666654
No 340
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=96.77 E-value=0.0038 Score=64.99 Aligned_cols=116 Identities=12% Similarity=0.128 Sum_probs=82.4
Q ss_pred CCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceEEe
Q 011641 324 NKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVSVV 403 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (480)
..+|+|+|+.. ....++..|.++|++|.+||......+...+.+ . .-..+..+
T Consensus 4 ~~kIgiIGlG~----------MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g---~--------------~g~~i~~~ 56 (484)
T 4gwg_A 4 QADIALIGLAV----------MGQNLILNMNDHGFVVCAFNRTVSKVDDFLANE---A--------------KGTKVVGA 56 (484)
T ss_dssp CBSEEEECCSH----------HHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTT---T--------------TTSSCEEC
T ss_pred CCEEEEEChhH----------HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcc---c--------------CCCceecc
Confidence 46899999865 889999999999999999998765433222110 0 00134456
Q ss_pred cCHHhhcc---cccEEEEEecCc-ccccccHHHHHHhcCCCCEEEEcCCCCCh------hhhhhcCcEEEEecC
Q 011641 404 WDAYEATK---DAHGVCILTEWD-EFKTLDYQRIYDNMQKPAFVFDGRNVVDA------NKLREIGFIVYSIGK 467 (480)
Q Consensus 404 ~~~~~a~~---~ad~vvi~t~~~-~~~~~~~~~~~~~~~~~~~viD~~~~~~~------~~~~~~g~~y~~iG~ 467 (480)
.++.++++ ++|+|+++++.+ ..++ -.+.+...+++..+|||+.+.... +.+.+.|+.|.+.+.
T Consensus 57 ~s~~e~v~~l~~aDvVil~Vp~~~~v~~-vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pV 129 (484)
T 4gwg_A 57 QSLKEMVSKLKKPRRIILLVKAGQAVDD-FIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGV 129 (484)
T ss_dssp SSHHHHHHTBCSSCEEEECSCSSHHHHH-HHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCHHHHHhhccCCCEEEEecCChHHHHH-HHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCc
Confidence 78888776 599999999986 3333 246777778777799999998853 234466898987754
No 341
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.77 E-value=0.0027 Score=57.32 Aligned_cols=73 Identities=29% Similarity=0.328 Sum_probs=48.2
Q ss_pred cEEEEECC-ChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|+|.|.|. |.+|..++..|+++ |++|+++++++++.+.+......+.. +.+.-..++.++++++|
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~------------~D~~~~~~~~~~~~~~d 69 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQA--GYEVTVLVRDSSRLPSEGPRPAHVVV------------GDVLQAADVDKTVAGQD 69 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCGGGSCSSSCCCSEEEE------------SCTTSHHHHHHHHTTCS
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEEeChhhcccccCCceEEEE------------ecCCCHHHHHHHHcCCC
Confidence 68999997 99999999999998 99999999998654221111000000 00100112345677899
Q ss_pred EEEEeccC
Q 011641 81 IVFVSVNT 88 (480)
Q Consensus 81 vVii~Vpt 88 (480)
+||-+...
T Consensus 70 ~vi~~a~~ 77 (206)
T 1hdo_A 70 AVIVLLGT 77 (206)
T ss_dssp EEEECCCC
T ss_pred EEEECccC
Confidence 99998764
No 342
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=96.72 E-value=0.0041 Score=60.81 Aligned_cols=95 Identities=18% Similarity=0.144 Sum_probs=71.9
Q ss_pred cCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccce
Q 011641 321 TVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+. .-...+++.|...|++|.+|||... +. . .
T Consensus 121 ~l~g~~vgIIG~G----------~IG~~~A~~l~~~G~~V~~~dr~~~-~~--~-------------------------~ 162 (303)
T 1qp8_A 121 LIQGEKVAVLGLG----------EIGTRVGKILAALGAQVRGFSRTPK-EG--P-------------------------W 162 (303)
T ss_dssp CCTTCEEEEESCS----------THHHHHHHHHHHTTCEEEEECSSCC-CS--S-------------------------S
T ss_pred CCCCCEEEEEccC----------HHHHHHHHHHHHCCCEEEEECCCcc-cc--C-------------------------c
Confidence 4788999999984 5789999999999999999998754 11 0 1
Q ss_pred EEecCHHhhcccccEEEEEecCc-ccccccHHHHHHhcCCCCEEEEcCC--CCChh
Q 011641 401 SVVWDAYEATKDAHGVCILTEWD-EFKTLDYQRIYDNMQKPAFVFDGRN--VVDAN 453 (480)
Q Consensus 401 ~~~~~~~~a~~~ad~vvi~t~~~-~~~~~~~~~~~~~~~~~~~viD~~~--~~~~~ 453 (480)
....++++.++.+|+|+++++.. +.+++=-.+..+.|++..++||+-+ +.+.+
T Consensus 163 ~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~ 218 (303)
T 1qp8_A 163 RFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRD 218 (303)
T ss_dssp CCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHH
T ss_pred ccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHH
Confidence 12357789999999999999886 3444322456788988889999976 45543
No 343
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=96.72 E-value=0.0047 Score=64.42 Aligned_cols=117 Identities=15% Similarity=0.235 Sum_probs=80.6
Q ss_pred cCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccce
Q 011641 321 TVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.++.++|+|+|+. +....++..|.++|.+|.+||......+...... + -.++
T Consensus 12 ~~~~~~IgvIGlG----------~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~--------~----------~~gi 63 (480)
T 2zyd_A 12 HMSKQQIGVVGMA----------VMGRNLALNIESRGYTVSIFNRSREKTEEVIAEN--------P----------GKKL 63 (480)
T ss_dssp ---CBSEEEECCS----------HHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHS--------T----------TSCE
T ss_pred ccCCCeEEEEccH----------HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhC--------C----------CCCe
Confidence 3577899999985 4889999999999999999998644322111100 0 0246
Q ss_pred EEecCHHhhccc---ccEEEEEecCc-ccccccHHHHHHhcCCCCEEEEcCCCCChh------hhhhcCcEEEEec
Q 011641 401 SVVWDAYEATKD---AHGVCILTEWD-EFKTLDYQRIYDNMQKPAFVFDGRNVVDAN------KLREIGFIVYSIG 466 (480)
Q Consensus 401 ~~~~~~~~a~~~---ad~vvi~t~~~-~~~~~~~~~~~~~~~~~~~viD~~~~~~~~------~~~~~g~~y~~iG 466 (480)
..+.++.+++++ +|+|+++++.+ ..++. .+.+...+++..+|||+.+..... .+.+.|+.|.+.+
T Consensus 64 ~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~v-l~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~p 138 (480)
T 2zyd_A 64 VPYYTVKEFVESLETPRRILLMVKAGAGTDAA-IDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTG 138 (480)
T ss_dssp EECSSHHHHHHTBCSSCEEEECSCSSSHHHHH-HHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEeCCHHHHHhCCCCCCEEEEECCCHHHHHHH-HHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCCc
Confidence 777889998887 99999999985 44442 356666776656999999988532 2334577776554
No 344
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=96.71 E-value=0.0035 Score=62.38 Aligned_cols=87 Identities=14% Similarity=0.129 Sum_probs=51.2
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEE-EECCHHHHHHHHc-CCCCCcCCC-hHHHHhhhcCCCEEEecCHHHhhc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAV-VDISVSRINAWNS-DQLPIYEPG-LDGVVKQCRGKNLFFSTDVEKHVS 77 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~-~D~~~~~v~~l~~-~~~~~~e~~-l~~~~~~~~~~~l~~t~d~~~a~~ 77 (480)
|+||||+|+|.+|..++..|..+ ++++|.+ .|.+++....+.+ .....+..- ...-+.....+.+.+..+..+...
T Consensus 2 mikVgI~G~G~IGr~v~r~l~~~-~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~ 80 (343)
T 2yyy_A 2 PAKVLINGYGSIGKRVADAVSMQ-DDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIE 80 (343)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHS-SSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGG
T ss_pred ceEEEEECCCHHHHHHHHHHHhC-CCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhcc
Confidence 35999999999999999999875 4677664 4666665554432 111111110 011110001123444445566567
Q ss_pred cCcEEEEeccC
Q 011641 78 EADIVFVSVNT 88 (480)
Q Consensus 78 ~aDvVii~Vpt 88 (480)
++|+||.|+|.
T Consensus 81 ~vDiV~eatg~ 91 (343)
T 2yyy_A 81 DADIVVDGAPK 91 (343)
T ss_dssp GCSEEEECCCT
T ss_pred CCCEEEECCCc
Confidence 99999999663
No 345
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=96.69 E-value=0.0051 Score=60.12 Aligned_cols=111 Identities=8% Similarity=0.011 Sum_probs=76.9
Q ss_pred CCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceE
Q 011641 322 VSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVS 401 (480)
Q Consensus 322 ~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (480)
....+|+|+|+.. ....++..|.+.|.+|.+||+.....+.... .++.
T Consensus 7 ~~~~~IgiIG~G~----------mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~----------------------~g~~ 54 (306)
T 3l6d_A 7 SFEFDVSVIGLGA----------MGTIMAQVLLKQGKRVAIWNRSPGKAAALVA----------------------AGAH 54 (306)
T ss_dssp CCSCSEEEECCSH----------HHHHHHHHHHHTTCCEEEECSSHHHHHHHHH----------------------HTCE
T ss_pred cCCCeEEEECCCH----------HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----------------------CCCe
Confidence 3457899999865 7899999999999999999986543222211 2356
Q ss_pred EecCHHhhcccccEEEEEecCcc-cccc-cHHHHHHhcCCCCEEEEcCCCCChh------hhhhcCcEEEEe
Q 011641 402 VVWDAYEATKDAHGVCILTEWDE-FKTL-DYQRIYDNMQKPAFVFDGRNVVDAN------KLREIGFIVYSI 465 (480)
Q Consensus 402 ~~~~~~~a~~~ad~vvi~t~~~~-~~~~-~~~~~~~~~~~~~~viD~~~~~~~~------~~~~~g~~y~~i 465 (480)
...++.++++++|+|+++++.+. .++. ..+.+.. +.+..+|||+...-... .+++.|..|..-
T Consensus 55 ~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~~l~~-~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vda 125 (306)
T 3l6d_A 55 LCESVKAALSASPATIFVLLDNHATHEVLGMPGVAR-ALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKG 125 (306)
T ss_dssp ECSSHHHHHHHSSEEEECCSSHHHHHHHHTSTTHHH-HTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEE
T ss_pred ecCCHHHHHhcCCEEEEEeCCHHHHHHHhcccchhh-ccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEec
Confidence 67899999999999999998764 3331 1013333 34456999998876532 234568888653
No 346
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=96.69 E-value=0.0092 Score=60.89 Aligned_cols=116 Identities=14% Similarity=0.107 Sum_probs=80.2
Q ss_pred HHHhcCcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCc
Q 011641 315 VASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSP 394 (480)
Q Consensus 315 ~~~l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (480)
.+..+..+.+++|+|+|++ .-...+++.|...|++|.+|||..........
T Consensus 202 ~ratg~~L~GktVgIiG~G----------~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~------------------- 252 (436)
T 3h9u_A 202 KRATDVMIAGKTACVCGYG----------DVGKGCAAALRGFGARVVVTEVDPINALQAAM------------------- 252 (436)
T ss_dssp HHHHCCCCTTCEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-------------------
T ss_pred HHhcCCcccCCEEEEEeeC----------HHHHHHHHHHHHCCCEEEEECCChhhhHHHHH-------------------
Confidence 3334567889999999963 36889999999999999999996432211111
Q ss_pred ccccceEEecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCC---CChhhhhhcCcEEEEec
Q 011641 395 TMVKQVSVVWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNV---VDANKLREIGFIVYSIG 466 (480)
Q Consensus 395 ~~~~~~~~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~---~~~~~~~~~g~~y~~iG 466 (480)
.+..+ .+++++++++|++++.+..... ++. +..+.|++.++|++.-+- +|.+.+........++-
T Consensus 253 ---~G~~~-~sL~eal~~ADVVilt~gt~~i--I~~-e~l~~MK~gAIVINvgRg~vEID~~~L~~~~~~~~~ir 320 (436)
T 3h9u_A 253 ---EGYQV-LLVEDVVEEAHIFVTTTGNDDI--ITS-EHFPRMRDDAIVCNIGHFDTEIQVAWLKANAKERVEVK 320 (436)
T ss_dssp ---TTCEE-CCHHHHTTTCSEEEECSSCSCS--BCT-TTGGGCCTTEEEEECSSSGGGBCHHHHHHHCSEEEEEE
T ss_pred ---hCCee-cCHHHHHhhCCEEEECCCCcCc--cCH-HHHhhcCCCcEEEEeCCCCCccCHHHHHhhcCceEeec
Confidence 12333 4899999999999986654433 332 345678888899998652 56666766666666664
No 347
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=96.68 E-value=0.0016 Score=64.35 Aligned_cols=100 Identities=10% Similarity=0.066 Sum_probs=72.6
Q ss_pred cCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccce
Q 011641 321 TVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+. .-...+++.|...|++|.+||+....... ....
T Consensus 137 ~l~g~tvGIIGlG----------~IG~~vA~~l~~~G~~V~~~dr~~~~~~~------------------------~~~~ 182 (324)
T 3hg7_A 137 GLKGRTLLILGTG----------SIGQHIAHTGKHFGMKVLGVSRSGRERAG------------------------FDQV 182 (324)
T ss_dssp CSTTCEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSSCCCCTT------------------------CSEE
T ss_pred ccccceEEEEEEC----------HHHHHHHHHHHhCCCEEEEEcCChHHhhh------------------------hhcc
Confidence 5689999999984 57899999999999999999987532210 0112
Q ss_pred EEecCHHhhcccccEEEEEecCc-cccc-ccHHHHHHhcCCCCEEEEcCC--CCChhhh
Q 011641 401 SVVWDAYEATKDAHGVCILTEWD-EFKT-LDYQRIYDNMQKPAFVFDGRN--VVDANKL 455 (480)
Q Consensus 401 ~~~~~~~~a~~~ad~vvi~t~~~-~~~~-~~~~~~~~~~~~~~~viD~~~--~~~~~~~ 455 (480)
....++++.++++|+|+++++-. +-+. ++ .+..+.|++.+++||+-+ ++|.+.+
T Consensus 183 ~~~~~l~ell~~aDvV~l~lPlt~~T~~li~-~~~l~~mk~gailIN~aRG~~vde~aL 240 (324)
T 3hg7_A 183 YQLPALNKMLAQADVIVSVLPATRETHHLFT-ASRFEHCKPGAILFNVGRGNAINEGDL 240 (324)
T ss_dssp ECGGGHHHHHHTCSEEEECCCCCSSSTTSBC-TTTTTCSCTTCEEEECSCGGGBCHHHH
T ss_pred cccCCHHHHHhhCCEEEEeCCCCHHHHHHhH-HHHHhcCCCCcEEEECCCchhhCHHHH
Confidence 22467899999999999998853 3333 33 345677888889999976 6665433
No 348
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=96.68 E-value=0.0013 Score=64.69 Aligned_cols=73 Identities=19% Similarity=0.191 Sum_probs=49.9
Q ss_pred cEEEEECCCh-hHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEE-E--e--cCHHHh
Q 011641 2 VKICCIGAGY-VGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLF-F--S--TDVEKH 75 (480)
Q Consensus 2 mkI~VIGlG~-~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~-~--t--~d~~~a 75 (480)
.++.|||.|. +|.++|..|... |..|+++|++..+....... +.. . ....+ + + .++++.
T Consensus 178 k~vvVIG~G~iVG~~~A~~L~~~--gAtVtv~nR~~~~l~~ra~~---la~--------~--~~~~t~~~~t~~~~L~e~ 242 (320)
T 1edz_A 178 KKCIVINRSEIVGRPLAALLAND--GATVYSVDVNNIQKFTRGES---LKL--------N--KHHVEDLGEYSEDLLKKC 242 (320)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTT--SCEEEEECSSEEEEEESCCC---SSC--------C--CCEEEEEEECCHHHHHHH
T ss_pred CEEEEECCCcchHHHHHHHHHHC--CCEEEEEeCchHHHHhHHHH---Hhh--------h--cccccccccccHhHHHHH
Confidence 4799999996 599999999988 89999999974332111110 000 0 00111 1 2 577888
Q ss_pred hccCcEEEEeccCC
Q 011641 76 VSEADIVFVSVNTP 89 (480)
Q Consensus 76 ~~~aDvVii~Vptp 89 (480)
++.||+||.+++.|
T Consensus 243 l~~ADIVIsAtg~p 256 (320)
T 1edz_A 243 SLDSDVVITGVPSE 256 (320)
T ss_dssp HHHCSEEEECCCCT
T ss_pred hccCCEEEECCCCC
Confidence 99999999999876
No 349
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.68 E-value=0.0016 Score=66.44 Aligned_cols=42 Identities=26% Similarity=0.402 Sum_probs=37.0
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCC---CeEEEEECCHHHHHHHHc
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPS---IEVAVVDISVSRINAWNS 44 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G---~~V~~~D~~~~~v~~l~~ 44 (480)
||||+|+|+|.+|..++..|+++ | .+|+++|+++++.+.+.+
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~--g~~~~~V~v~~r~~~~~~~la~ 45 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMN--REVFSHITLASRTLSKCQEIAQ 45 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTC--TTTCCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCceEEEEEECCHHHHHHHHH
Confidence 78999999999999999999987 6 389999999999887664
No 350
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=96.66 E-value=0.0017 Score=63.41 Aligned_cols=109 Identities=10% Similarity=0.024 Sum_probs=74.5
Q ss_pred CCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceEE-
Q 011641 324 NKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVSV- 402 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 402 (480)
..||+|+|+.. ....++..|.+.|.+|.+||+.....+...+. +...
T Consensus 7 ~~~I~iIG~G~----------mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~----------------------g~~~~ 54 (303)
T 3g0o_A 7 DFHVGIVGLGS----------MGMGAARSCLRAGLSTWGADLNPQACANLLAE----------------------GACGA 54 (303)
T ss_dssp CCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT----------------------TCSEE
T ss_pred CCeEEEECCCH----------HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc----------------------CCccc
Confidence 46899999865 78999999999999999999864432222211 2333
Q ss_pred ecCHHhhcccccEEEEEecCcc-ccccc--HHHHHHhcCCCCEEEEcCCCCChh------hhhhcCcEEEE
Q 011641 403 VWDAYEATKDAHGVCILTEWDE-FKTLD--YQRIYDNMQKPAFVFDGRNVVDAN------KLREIGFIVYS 464 (480)
Q Consensus 403 ~~~~~~a~~~ad~vvi~t~~~~-~~~~~--~~~~~~~~~~~~~viD~~~~~~~~------~~~~~g~~y~~ 464 (480)
..++.++++++|+|+++++.+. .+..- .+.+...+++..+|+|+.+..... .+.+.|..|..
T Consensus 55 ~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~ 125 (303)
T 3g0o_A 55 AASAREFAGVVDALVILVVNAAQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLD 125 (303)
T ss_dssp ESSSTTTTTTCSEEEECCSSHHHHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred cCCHHHHHhcCCEEEEECCCHHHHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeEEe
Confidence 6788999999999999998753 22210 023345566667999998865421 22345777754
No 351
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=96.66 E-value=0.0073 Score=57.15 Aligned_cols=32 Identities=22% Similarity=0.483 Sum_probs=26.3
Q ss_pred cEEEEECC-ChhHHHHHHHHHHcCCCCeEEE-EEC
Q 011641 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAV-VDI 34 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~-~D~ 34 (480)
|||+|+|+ |.||..++..+... +++++.+ +|+
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~-~~~elva~~d~ 34 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAA-DDLTLSAELDA 34 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHC-TTCEEEEEECT
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEcc
Confidence 79999996 99999999988764 4888874 554
No 352
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.65 E-value=0.007 Score=58.64 Aligned_cols=73 Identities=18% Similarity=0.340 Sum_probs=56.2
Q ss_pred cEEEEECCCh-hHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGAGY-VGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGlG~-~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.++.|||.|. +|.++|..|... |..|+++++. +.++.+.++.||
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~--gAtVtv~hs~---------------------------------t~~L~~~~~~AD 210 (301)
T 1a4i_A 166 RHAVVVGRSKIVGAPMHDLLLWN--NATVTTCHSK---------------------------------TAHLDEEVNKGD 210 (301)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT--TCEEEEECTT---------------------------------CSSHHHHHTTCS
T ss_pred CEEEEECCCchHHHHHHHHHHhC--CCeEEEEECC---------------------------------cccHHHHhccCC
Confidence 4799999995 899999999998 8999999742 235667789999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCC
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTV 129 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv 129 (480)
+||.+++.|.-. . ...++++.+||+.+..
T Consensus 211 IVI~Avg~p~~I---------~-----------~~~vk~GavVIDVgi~ 239 (301)
T 1a4i_A 211 ILVVATGQPEMV---------K-----------GEWIKPGAIVIDCGIN 239 (301)
T ss_dssp EEEECCCCTTCB---------C-----------GGGSCTTCEEEECCCB
T ss_pred EEEECCCCcccC---------C-----------HHHcCCCcEEEEccCC
Confidence 999999876321 0 1336789999986543
No 353
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.62 E-value=0.0036 Score=59.44 Aligned_cols=33 Identities=15% Similarity=0.377 Sum_probs=30.5
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCC-eEEEEECCH
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISV 36 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~ 36 (480)
++|.|||+|.+|..+|..|+.. |. +++++|.+.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~--Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASA--GVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHc--CCCeEEEEcCCC
Confidence 5799999999999999999998 76 899999987
No 354
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=96.62 E-value=0.0035 Score=59.20 Aligned_cols=100 Identities=16% Similarity=0.014 Sum_probs=66.3
Q ss_pred cCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHH-----------HHhhhccccCCCCCCCC
Q 011641 321 TVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQI-----------QRDLTMNKFDWDHPLHL 389 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~-----------~~~~~~~~~~~~~~~~~ 389 (480)
.+..++|+|+|+. +....++..|.+.|.+|.+||........ ...+.
T Consensus 16 ~~~~~kIgiIG~G----------~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~------------ 73 (245)
T 3dtt_A 16 YFQGMKIAVLGTG----------TVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWL------------ 73 (245)
T ss_dssp ---CCEEEEECCS----------HHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHG------------
T ss_pred ccCCCeEEEECCC----------HHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHH------------
Confidence 5678899999985 48899999999999999999986432000 01110
Q ss_pred CCCCcccccceEEecCHHhhcccccEEEEEecCcccccccHHHH-HHhcCCCCEEEEcCCCC
Q 011641 390 QPMSPTMVKQVSVVWDAYEATKDAHGVCILTEWDEFKTLDYQRI-YDNMQKPAFVFDGRNVV 450 (480)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~-~~~~~~~~~viD~~~~~ 450 (480)
.... .....++.++++++|+||++++.+...+. ..++ ...++ ..+|||+.|-+
T Consensus 74 -----~~~~-~~~~~~~~e~~~~aDvVilavp~~~~~~~-~~~i~~~~l~-g~ivi~~s~~~ 127 (245)
T 3dtt_A 74 -----PEHP-HVHLAAFADVAAGAELVVNATEGASSIAA-LTAAGAENLA-GKILVDIANPL 127 (245)
T ss_dssp -----GGST-TCEEEEHHHHHHHCSEEEECSCGGGHHHH-HHHHCHHHHT-TSEEEECCCCE
T ss_pred -----hhcC-ceeccCHHHHHhcCCEEEEccCcHHHHHH-HHHhhhhhcC-CCEEEECCCCC
Confidence 0001 12356788999999999999998876542 2344 44443 45999999643
No 355
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.61 E-value=0.013 Score=56.25 Aligned_cols=102 Identities=16% Similarity=0.105 Sum_probs=66.8
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCC-eEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhh-ccC
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV-SEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~-~~a 79 (480)
.++.|+|+|.+|.+++..|++. |. +|++++|++++.+.+.+... .+.+.+. +.++.. .++
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~--G~~~v~i~~R~~~~a~~la~~~~---------------~~~~~~~-~~~~l~~~~~ 182 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQA--GPSELVIANRDMAKALALRNELD---------------HSRLRIS-RYEALEGQSF 182 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--CCSEEEEECSCHHHHHHHHHHHC---------------CTTEEEE-CSGGGTTCCC
T ss_pred CEEEEECccHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhc---------------cCCeeEe-eHHHhcccCC
Confidence 4799999999999999999998 85 99999999999888764210 0113322 222211 689
Q ss_pred cEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHH
Q 011641 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAI 137 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l 137 (480)
|+||-|+|.....+ .+.+. ...++++.+|++....|.. |..+
T Consensus 183 DivInaTp~gm~~~------~~~i~---------~~~l~~~~~V~DlvY~P~~-T~ll 224 (272)
T 3pwz_A 183 DIVVNATSASLTAD------LPPLP---------ADVLGEAALAYELAYGKGL-TPFL 224 (272)
T ss_dssp SEEEECSSGGGGTC------CCCCC---------GGGGTTCSEEEESSCSCCS-CHHH
T ss_pred CEEEECCCCCCCCC------CCCCC---------HHHhCcCCEEEEeecCCCC-CHHH
Confidence 99999977543210 11110 1345678888887766544 4443
No 356
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=96.58 E-value=0.0061 Score=59.09 Aligned_cols=72 Identities=24% Similarity=0.365 Sum_probs=54.5
Q ss_pred cEEEEECCCh-hHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHH--Hhhcc
Q 011641 2 VKICCIGAGY-VGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVE--KHVSE 78 (480)
Q Consensus 2 mkI~VIGlG~-~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~--~a~~~ 78 (480)
.++.|||.|. +|.++|..|... |..|+++++... +++ +.++.
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~--gAtVtv~~~~T~---------------------------------~l~l~~~~~~ 210 (300)
T 4a26_A 166 KRAVVLGRSNIVGAPVAALLMKE--NATVTIVHSGTS---------------------------------TEDMIDYLRT 210 (300)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT--TCEEEEECTTSC---------------------------------HHHHHHHHHT
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCCC---------------------------------Cchhhhhhcc
Confidence 4799999876 899999999998 899999987311 223 56889
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecC
Q 011641 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST 128 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST 128 (480)
||+||.+++.|... . ...++++.+||+.++
T Consensus 211 ADIVI~Avg~p~~I---------~-----------~~~vk~GavVIDvgi 240 (300)
T 4a26_A 211 ADIVIAAMGQPGYV---------K-----------GEWIKEGAAVVDVGT 240 (300)
T ss_dssp CSEEEECSCCTTCB---------C-----------GGGSCTTCEEEECCC
T ss_pred CCEEEECCCCCCCC---------c-----------HHhcCCCcEEEEEec
Confidence 99999999876321 1 134688999987544
No 357
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.54 E-value=0.0057 Score=60.44 Aligned_cols=118 Identities=19% Similarity=0.215 Sum_probs=65.6
Q ss_pred CcEEEEECCChhHHHHHHHHHHc-------CCCCeEEE-EECCHHHHHHHHcCCCCCcCCChHHHHhh-hcCCCEEEe--
Q 011641 1 MVKICCIGAGYVGGPTMAVIALK-------CPSIEVAV-VDISVSRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFS-- 69 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~-------~~G~~V~~-~D~~~~~v~~l~~~~~~~~e~~l~~~~~~-~~~~~l~~t-- 69 (480)
|+||+|||+|.||..++..|.++ +++.+|++ +|+++++.+. ..+.+.+.. ...+ .++
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~----------id~~~~~~~~~~~~--~~~~~ 69 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGD----------FSLVEALRMKRETG--MLRDD 69 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESS----------CCHHHHHHHHHHHS--SCSBC
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccc----------cCHHHHHhhhccCc--cccCC
Confidence 78999999999999999999764 13566654 5766443211 001111100 0001 123
Q ss_pred cCHHHhhc--cCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcc-hHHHHHHHHHhc
Q 011641 70 TDVEKHVS--EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVK-TAEAIEKILTHN 144 (480)
Q Consensus 70 ~d~~~a~~--~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~g-t~~~l~~~l~~~ 144 (480)
.|+++.++ +.|+|++|+|+..+. .+ +.+.+...+..|.-|+..++-|.. ..+++.+..++.
T Consensus 70 ~d~~~ll~~~~iDvVv~~tp~~~h~-------------~~-a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~ 133 (327)
T 3do5_A 70 AKAIEVVRSADYDVLIEASVTRVDG-------------GE-GVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERN 133 (327)
T ss_dssp CCHHHHHHHSCCSEEEECCCCC-----------------C-HHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHhcCCCCCEEEECCCCcccc-------------hh-HHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhh
Confidence 37777664 589999998764321 12 344455667778888766553332 223444444443
No 358
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=96.54 E-value=0.007 Score=59.98 Aligned_cols=100 Identities=13% Similarity=0.084 Sum_probs=74.1
Q ss_pred cCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccce
Q 011641 321 TVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+. .-...+++.|...|++|.+|||..... . ..+ +
T Consensus 143 ~l~g~~vgIiG~G----------~IG~~~A~~l~~~G~~V~~~d~~~~~~-~-~~~-----------------------~ 187 (333)
T 1j4a_A 143 EVRDQVVGVVGTG----------HIGQVFMQIMEGFGAKVITYDIFRNPE-L-EKK-----------------------G 187 (333)
T ss_dssp CGGGSEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSSCCHH-H-HHT-----------------------T
T ss_pred cCCCCEEEEEccC----------HHHHHHHHHHHHCCCEEEEECCCcchh-H-Hhh-----------------------C
Confidence 4678899999984 478899999999999999999987654 2 111 2
Q ss_pred EEecCHHhhcccccEEEEEecCcc-cccccHHHHHHhcCCCCEEEEcCC--CCChhhh
Q 011641 401 SVVWDAYEATKDAHGVCILTEWDE-FKTLDYQRIYDNMQKPAFVFDGRN--VVDANKL 455 (480)
Q Consensus 401 ~~~~~~~~a~~~ad~vvi~t~~~~-~~~~~~~~~~~~~~~~~~viD~~~--~~~~~~~ 455 (480)
++.+++++.++++|+|+++++... .+++=-....+.|++.+++||+-+ +.+.+.+
T Consensus 188 ~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL 245 (333)
T 1j4a_A 188 YYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDAV 245 (333)
T ss_dssp CBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHH
T ss_pred eecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccCHHHH
Confidence 233478899999999999998743 444322456678888789999876 5665443
No 359
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=96.53 E-value=0.0075 Score=58.08 Aligned_cols=71 Identities=27% Similarity=0.406 Sum_probs=54.5
Q ss_pred cEEEEECCCh-hHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGAGY-VGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGlG~-~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.++.|||.|. +|.++|..|... |..|+++++. +.++.+.++.||
T Consensus 160 k~vvVIG~s~iVG~p~A~lL~~~--gAtVtv~hs~---------------------------------t~~L~~~~~~AD 204 (288)
T 1b0a_A 160 LNAVVIGASNIVGRPMSMELLLA--GCTTTVTHRF---------------------------------TKNLRHHVENAD 204 (288)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTT--TCEEEEECSS---------------------------------CSCHHHHHHHCS
T ss_pred CEEEEECCChHHHHHHHHHHHHC--CCeEEEEeCC---------------------------------chhHHHHhccCC
Confidence 4799999996 799999999998 8999998642 135566789999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEec
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKS 127 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~S 127 (480)
+||.+++.|.-- . ...++++.+||+.+
T Consensus 205 IVI~Avg~p~lI-------~-------------~~~vk~GavVIDVg 231 (288)
T 1b0a_A 205 LLIVAVGKPGFI-------P-------------GDWIKEGAIVIDVG 231 (288)
T ss_dssp EEEECSCCTTCB-------C-------------TTTSCTTCEEEECC
T ss_pred EEEECCCCcCcC-------C-------------HHHcCCCcEEEEcc
Confidence 999999977321 0 12357899888744
No 360
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=96.53 E-value=0.0049 Score=59.85 Aligned_cols=70 Identities=19% Similarity=0.233 Sum_probs=48.6
Q ss_pred CcEEEEEC-CChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccC
Q 011641 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
||+|.|.| .|++|..++..|.++ |++|+++++++...+ +. + ..+. .+.+. ..++.++++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~-~~-~-~~~~------------~~Dl~-~~~~~~~~~~~ 63 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKND--GNTPIILTRSIGNKA-IN-D-YEYR------------VSDYT-LEDLINQLNDV 63 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCC-------C-CEEE------------ECCCC-HHHHHHHTTTC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEeCCCCccc-CC-c-eEEE------------Ecccc-HHHHHHhhcCC
Confidence 47899999 699999999999998 999999999855443 32 1 1110 12333 44556677899
Q ss_pred cEEEEeccC
Q 011641 80 DIVFVSVNT 88 (480)
Q Consensus 80 DvVii~Vpt 88 (480)
|+||-|...
T Consensus 64 d~Vih~a~~ 72 (311)
T 3m2p_A 64 DAVVHLAAT 72 (311)
T ss_dssp SEEEECCCC
T ss_pred CEEEEcccc
Confidence 999988653
No 361
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=96.52 E-value=0.0056 Score=61.64 Aligned_cols=99 Identities=15% Similarity=0.169 Sum_probs=73.0
Q ss_pred cCcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCccccc
Q 011641 319 FNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVK 398 (480)
Q Consensus 319 ~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (480)
+..+.+++|+|+|+. .-...+++.|...|.+|.+|||..... . .
T Consensus 114 g~~l~gktvGIIGlG----------~IG~~vA~~l~a~G~~V~~~d~~~~~~---~-----------------------~ 157 (381)
T 3oet_A 114 GFSLRDRTIGIVGVG----------NVGSRLQTRLEALGIRTLLCDPPRAAR---G-----------------------D 157 (381)
T ss_dssp TCCGGGCEEEEECCS----------HHHHHHHHHHHHTTCEEEEECHHHHHT---T-----------------------C
T ss_pred CCccCCCEEEEEeEC----------HHHHHHHHHHHHCCCEEEEECCChHHh---c-----------------------c
Confidence 456789999999984 478999999999999999999942111 0 0
Q ss_pred ceEEecCHHhhcccccEEEEEecCcc------cccccHHHHHHhcCCCCEEEEcCC--CCChhhh
Q 011641 399 QVSVVWDAYEATKDAHGVCILTEWDE------FKTLDYQRIYDNMQKPAFVFDGRN--VVDANKL 455 (480)
Q Consensus 399 ~~~~~~~~~~a~~~ad~vvi~t~~~~------~~~~~~~~~~~~~~~~~~viD~~~--~~~~~~~ 455 (480)
.. ...++++.++++|+|+++++... ..-++ .+..+.|++.+++||+-+ ++|.+.+
T Consensus 158 ~~-~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~-~~~l~~mk~gailIN~aRG~vvde~aL 220 (381)
T 3oet_A 158 EG-DFRTLDELVQEADVLTFHTPLYKDGPYKTLHLAD-ETLIRRLKPGAILINACRGPVVDNAAL 220 (381)
T ss_dssp CS-CBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBC-HHHHHHSCTTEEEEECSCGGGBCHHHH
T ss_pred Cc-ccCCHHHHHhhCCEEEEcCcCCccccccchhhcC-HHHHhcCCCCcEEEECCCCcccCHHHH
Confidence 11 23578999999999999997642 22244 456678888889999976 6676544
No 362
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=96.52 E-value=0.0046 Score=60.79 Aligned_cols=103 Identities=11% Similarity=0.037 Sum_probs=73.9
Q ss_pred CcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccc
Q 011641 320 NTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+. .-...+++.|...|++|.+||+.....+ .+ ..
T Consensus 135 ~~l~g~tvGIiG~G----------~IG~~vA~~l~~~G~~V~~~dr~~~~~~---~~---------------------~~ 180 (315)
T 3pp8_A 135 YTREEFSVGIMGAG----------VLGAKVAESLQAWGFPLRCWSRSRKSWP---GV---------------------ES 180 (315)
T ss_dssp CCSTTCCEEEECCS----------HHHHHHHHHHHTTTCCEEEEESSCCCCT---TC---------------------EE
T ss_pred CCcCCCEEEEEeeC----------HHHHHHHHHHHHCCCEEEEEcCCchhhh---hh---------------------hh
Confidence 35789999999984 4789999999999999999998654211 00 00
Q ss_pred eEEecCHHhhcccccEEEEEecCc-ccccccHHHHHHhcCCCCEEEEcCC--CCChhhhh
Q 011641 400 VSVVWDAYEATKDAHGVCILTEWD-EFKTLDYQRIYDNMQKPAFVFDGRN--VVDANKLR 456 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~~~-~~~~~~~~~~~~~~~~~~~viD~~~--~~~~~~~~ 456 (480)
..-..++++.++++|+|+++++.. +-+++=-.+..+.|++.+++||+-+ ++|.+.+.
T Consensus 181 ~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~ 240 (315)
T 3pp8_A 181 YVGREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLL 240 (315)
T ss_dssp EESHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHH
T ss_pred hcccCCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHH
Confidence 111257889999999999998854 4444322456788988889999876 66655443
No 363
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.51 E-value=0.0049 Score=58.42 Aligned_cols=79 Identities=16% Similarity=0.145 Sum_probs=54.9
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|+|+++|+|.||..++.. + ++++. +|+ +++ +.. +..+++|+++.+.++|
T Consensus 13 ~rV~i~G~GaIG~~v~~~---~--~leLv~v~~---~k~-----gel-----------------gv~a~~d~d~lla~pD 62 (253)
T 1j5p_A 13 MTVLIIGMGNIGKKLVEL---G--NFEKIYAYD---RIS-----KDI-----------------PGVVRLDEFQVPSDVS 62 (253)
T ss_dssp CEEEEECCSHHHHHHHHH---S--CCSEEEEEC---SSC-----CCC-----------------SSSEECSSCCCCTTCC
T ss_pred ceEEEECcCHHHHHHHhc---C--CcEEEEEEe---ccc-----ccc-----------------CceeeCCHHHHhhCCC
Confidence 899999999999999887 3 67764 555 221 100 2356778887777999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecC
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST 128 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST 128 (480)
+|+.|-+. ..+.+.+.+.|+.|.-|+..|.
T Consensus 63 ~VVe~A~~------------------~av~e~~~~iL~aG~dvv~~S~ 92 (253)
T 1j5p_A 63 TVVECASP------------------EAVKEYSLQILKNPVNYIIIST 92 (253)
T ss_dssp EEEECSCH------------------HHHHHHHHHHTTSSSEEEECCG
T ss_pred EEEECCCH------------------HHHHHHHHHHHHCCCCEEEcCh
Confidence 99999431 2233347778888887776664
No 364
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=96.49 E-value=0.0084 Score=62.75 Aligned_cols=115 Identities=13% Similarity=0.165 Sum_probs=80.4
Q ss_pred CCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceEEe
Q 011641 324 NKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVSVV 403 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (480)
..+|+|+|+.. ....|+..|.++|.+|.+||......+....- .++ -.++..+
T Consensus 10 ~~~IgvIGlG~----------MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~-------~~~----------~~gi~~~ 62 (497)
T 2p4q_A 10 SADFGLIGLAV----------MGQNLILNAADHGFTVCAYNRTQSKVDHFLAN-------EAK----------GKSIIGA 62 (497)
T ss_dssp CCSEEEECCSH----------HHHHHHHHHHHTTCCEEEECSSSHHHHHHHHT-------TTT----------TSSEECC
T ss_pred CCCEEEEeeHH----------HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcc-------ccc----------CCCeEEe
Confidence 45899999864 88999999999999999999865443221110 000 0246667
Q ss_pred cCHHhhccc---ccEEEEEecCc-ccccccHHHHHHhcCCCCEEEEcCCCCChh------hhhhcCcEEEEec
Q 011641 404 WDAYEATKD---AHGVCILTEWD-EFKTLDYQRIYDNMQKPAFVFDGRNVVDAN------KLREIGFIVYSIG 466 (480)
Q Consensus 404 ~~~~~a~~~---ad~vvi~t~~~-~~~~~~~~~~~~~~~~~~~viD~~~~~~~~------~~~~~g~~y~~iG 466 (480)
.++.+++++ +|+|+++++.+ ..++. .+.+...+++..+|||+.+..... .+.+.|+.|.+.+
T Consensus 63 ~s~~e~v~~l~~aDvVil~Vp~~~~v~~v-l~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~p 134 (497)
T 2p4q_A 63 TSIEDFISKLKRPRKVMLLVKAGAPVDAL-INQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSG 134 (497)
T ss_dssp SSHHHHHHTSCSSCEEEECCCSSHHHHHH-HHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHhcCCCCCEEEEEcCChHHHHHH-HHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCCC
Confidence 889998877 99999999985 44432 356666776656999999987532 2334577776654
No 365
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=96.49 E-value=0.0063 Score=60.36 Aligned_cols=41 Identities=22% Similarity=0.242 Sum_probs=31.0
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEE-EC--CHHHHHHHH
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVV-DI--SVSRINAWN 43 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~-D~--~~~~v~~l~ 43 (480)
+||||+|.|++|..++..|.++ ++.+|..+ |. +.+....+-
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~-p~vevvaI~d~~~~~~~~~~ll 47 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQS-EDVELVAVNDPFITTDYMTYMF 47 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-SSEEEEEEECSSSCHHHHHHHH
T ss_pred eEEEEECcCHHHHHHHHHHhCC-CCeEEEEEECCCCCHHHHHHhh
Confidence 4999999999999999999875 56777665 42 556555543
No 366
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=96.48 E-value=0.0066 Score=62.41 Aligned_cols=66 Identities=26% Similarity=0.330 Sum_probs=47.9
Q ss_pred EEEEECCChhHHHHHHHHHHc--------CCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHH
Q 011641 3 KICCIGAGYVGGPTMAVIALK--------CPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVE 73 (480)
Q Consensus 3 kI~VIGlG~~G~~lA~~La~~--------~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~ 73 (480)
||+|||+|.||..++..|.++ +++.+|. ++|+++++.+.+.. ...+++|++
T Consensus 12 rIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~~--------------------~~~~~~d~~ 71 (444)
T 3mtj_A 12 HVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAG--------------------GLPLTTNPF 71 (444)
T ss_dssp EEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHHT--------------------TCCEESCTH
T ss_pred cEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhcc--------------------cCcccCCHH
Confidence 799999999999998877531 1355554 67899887665421 124567888
Q ss_pred Hhhc--cCcEEEEeccC
Q 011641 74 KHVS--EADIVFVSVNT 88 (480)
Q Consensus 74 ~a~~--~aDvVii~Vpt 88 (480)
+.++ +.|+|++|+|+
T Consensus 72 ell~d~diDvVve~tp~ 88 (444)
T 3mtj_A 72 DVVDDPEIDIVVELIGG 88 (444)
T ss_dssp HHHTCTTCCEEEECCCS
T ss_pred HHhcCCCCCEEEEcCCC
Confidence 8775 57999999874
No 367
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=96.46 E-value=0.0078 Score=58.40 Aligned_cols=104 Identities=15% Similarity=0.115 Sum_probs=66.1
Q ss_pred cEEEEECC-ChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc--c
Q 011641 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS--E 78 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--~ 78 (480)
+||+|+|+ |.||..++..+.+. |++ .++.+|+.+. +. .+ .++.+..+++++.+ .
T Consensus 8 ~~VaVvGasG~~G~~~~~~l~~~--g~~-~v~~VnP~~~-----g~-~i--------------~G~~vy~sl~el~~~~~ 64 (288)
T 1oi7_A 8 TRVLVQGITGREGQFHTKQMLTY--GTK-IVAGVTPGKG-----GM-EV--------------LGVPVYDTVKEAVAHHE 64 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--TCE-EEEEECTTCT-----TC-EE--------------TTEEEESSHHHHHHHSC
T ss_pred CEEEEECCCCCHHHHHHHHHHHc--CCe-EEEEECCCCC-----Cc-eE--------------CCEEeeCCHHHHhhcCC
Confidence 68999998 99999999999887 888 4456665421 10 00 24677888888777 8
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
+|++++++|.+ ...++++..... .-..+|+..+.++....+++.+..++.
T Consensus 65 ~Dv~Ii~vp~~---------------~~~~~~~ea~~~-Gi~~vVi~t~G~~~~~~~~l~~~a~~~ 114 (288)
T 1oi7_A 65 VDASIIFVPAP---------------AAADAALEAAHA-GIPLIVLITEGIPTLDMVRAVEEIKAL 114 (288)
T ss_dssp CSEEEECCCHH---------------HHHHHHHHHHHT-TCSEEEECCSCCCHHHHHHHHHHHHHH
T ss_pred CCEEEEecCHH---------------HHHHHHHHHHHC-CCCEEEEECCCCCHHHHHHHHHHHHHc
Confidence 99999998742 234445544432 223345544444443344566665554
No 368
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=96.46 E-value=0.002 Score=61.82 Aligned_cols=74 Identities=11% Similarity=0.085 Sum_probs=50.4
Q ss_pred cEEEEEC-CChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|||.|.| .|.+|..++..|++. +|++|++.+|++++.+.+......+.. +.+.-..++.++++++|
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~-~g~~V~~~~R~~~~~~~~~~~~v~~~~------------~D~~d~~~l~~~~~~~d 67 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIAN-HIDHFHIGVRNVEKVPDDWRGKVSVRQ------------LDYFNQESMVEAFKGMD 67 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT-TCTTEEEEESSGGGSCGGGBTTBEEEE------------CCTTCHHHHHHHTTTCS
T ss_pred CEEEEEcCCchHHHHHHHHHhhC-CCCcEEEEECCHHHHHHhhhCCCEEEE------------cCCCCHHHHHHHHhCCC
Confidence 7899999 599999999999874 379999999998865544332111110 11111123455678999
Q ss_pred EEEEeccC
Q 011641 81 IVFVSVNT 88 (480)
Q Consensus 81 vVii~Vpt 88 (480)
+||.|.+.
T Consensus 68 ~vi~~a~~ 75 (289)
T 3e48_A 68 TVVFIPSI 75 (289)
T ss_dssp EEEECCCC
T ss_pred EEEEeCCC
Confidence 99998653
No 369
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=96.43 E-value=0.007 Score=59.52 Aligned_cols=108 Identities=20% Similarity=0.130 Sum_probs=76.1
Q ss_pred CeEEEEeeccCCCCCcccCChHHHHHHHHHhCC-CEEEEEcCCCC----hHHHHHhhhccccCCCCCCCCCCCCcccccc
Q 011641 325 KKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDK-ARLSIYDPQVT----EDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQ 399 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g-~~V~~~DP~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
.+|+|+|+.+ ....++..|.+.| .+|.+||+... .++....+. ..+
T Consensus 25 m~IgvIG~G~----------mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~-------------------~~g 75 (317)
T 4ezb_A 25 TTIAFIGFGE----------AAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAA-------------------ELG 75 (317)
T ss_dssp CEEEEECCSH----------HHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHH-------------------HTT
T ss_pred CeEEEECccH----------HHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHH-------------------HCC
Confidence 5899999865 7899999999999 99999998641 111111111 012
Q ss_pred eEEec-CHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCCCCh------hhhhhcCcEEEE
Q 011641 400 VSVVW-DAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNVVDA------NKLREIGFIVYS 464 (480)
Q Consensus 400 ~~~~~-~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~~~~------~~~~~~g~~y~~ 464 (480)
+ .. ++.++++++|+|+++++-+...+ ..+.+...+++..+|||..++... +.+.+.|..|..
T Consensus 76 ~--~~~s~~e~~~~aDvVi~avp~~~~~~-~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d 144 (317)
T 4ezb_A 76 V--EPLDDVAGIACADVVLSLVVGAATKA-VAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVE 144 (317)
T ss_dssp C--EEESSGGGGGGCSEEEECCCGGGHHH-HHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEE
T ss_pred C--CCCCHHHHHhcCCEEEEecCCHHHHH-HHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEe
Confidence 3 55 78899999999999998876554 235677777777799999876542 223355777754
No 370
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.43 E-value=0.011 Score=56.80 Aligned_cols=71 Identities=25% Similarity=0.358 Sum_probs=54.5
Q ss_pred cEEEEECCCh-hHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGAGY-VGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGlG~-~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.++.|||.|. +|.++|..|... |..|+++++. +.++++.++.||
T Consensus 161 k~vvVvGrs~iVG~p~A~lL~~~--gAtVtv~h~~---------------------------------t~~L~~~~~~AD 205 (285)
T 3p2o_A 161 KDAVIIGASNIVGRPMATMLLNA--GATVSVCHIK---------------------------------TKDLSLYTRQAD 205 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT--TCEEEEECTT---------------------------------CSCHHHHHTTCS
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCC---------------------------------chhHHHHhhcCC
Confidence 4799999876 799999999998 8999998752 134566789999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEec
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKS 127 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~S 127 (480)
+||.+++.|.-. . ...++++.+||+.+
T Consensus 206 IVI~Avg~p~~I---------~-----------~~~vk~GavVIDVg 232 (285)
T 3p2o_A 206 LIIVAAGCVNLL---------R-----------SDMVKEGVIVVDVG 232 (285)
T ss_dssp EEEECSSCTTCB---------C-----------GGGSCTTEEEEECC
T ss_pred EEEECCCCCCcC---------C-----------HHHcCCCeEEEEec
Confidence 999999876311 1 14568899888744
No 371
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=96.43 E-value=0.0084 Score=59.43 Aligned_cols=100 Identities=14% Similarity=0.172 Sum_probs=74.0
Q ss_pred CcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccc
Q 011641 320 NTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQ 399 (480)
Q Consensus 320 ~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
..+.+++|+|+|+. .-...+++.|...|++|.+|||..... . . ..
T Consensus 141 ~~l~g~~vgIiG~G----------~IG~~~A~~l~~~G~~V~~~d~~~~~~-~-~-----------------------~~ 185 (333)
T 1dxy_A 141 KELGQQTVGVMGTG----------HIGQVAIKLFKGFGAKVIAYDPYPMKG-D-H-----------------------PD 185 (333)
T ss_dssp CCGGGSEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSSCCSS-C-C-----------------------TT
T ss_pred cCCCCCEEEEECcC----------HHHHHHHHHHHHCCCEEEEECCCcchh-h-H-----------------------hc
Confidence 45788999999984 478899999999999999999976532 1 0 01
Q ss_pred eEEecCHHhhcccccEEEEEecCcc-ccc-ccHHHHHHhcCCCCEEEEcCC--CCChhhhh
Q 011641 400 VSVVWDAYEATKDAHGVCILTEWDE-FKT-LDYQRIYDNMQKPAFVFDGRN--VVDANKLR 456 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~~~~-~~~-~~~~~~~~~~~~~~~viD~~~--~~~~~~~~ 456 (480)
..+ .++++.++++|+|+++++... .++ ++ .+..+.|++..++||+-+ +++.+.+.
T Consensus 186 ~~~-~~l~ell~~aDvV~~~~P~~~~t~~li~-~~~l~~mk~ga~lIn~srg~~vd~~aL~ 244 (333)
T 1dxy_A 186 FDY-VSLEDLFKQSDVIDLHVPGIEQNTHIIN-EAAFNLMKPGAIVINTARPNLIDTQAML 244 (333)
T ss_dssp CEE-CCHHHHHHHCSEEEECCCCCGGGTTSBC-HHHHHHSCTTEEEEECSCTTSBCHHHHH
T ss_pred ccc-CCHHHHHhcCCEEEEcCCCchhHHHHhC-HHHHhhCCCCcEEEECCCCcccCHHHHH
Confidence 233 378999999999999988754 344 33 456678988889999866 55654443
No 372
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=96.43 E-value=0.01 Score=58.31 Aligned_cols=98 Identities=15% Similarity=0.107 Sum_probs=71.3
Q ss_pred CCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCC--EEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccce
Q 011641 323 SNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKA--RLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQV 400 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~--~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
...||+|+|+.- ..-.++..|.+.|. +|.+||+.....+...+++ . .-
T Consensus 32 ~~~kI~IIG~G~----------mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G------------------~--~~ 81 (314)
T 3ggo_A 32 SMQNVLIVGVGF----------MGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLG------------------I--ID 81 (314)
T ss_dssp SCSEEEEESCSH----------HHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTT------------------S--CS
T ss_pred CCCEEEEEeeCH----------HHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCC------------------C--cc
Confidence 347999999754 77889999999999 9999999654333222221 0 01
Q ss_pred EEecCHHh-hcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCCCC
Q 011641 401 SVVWDAYE-ATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNVVD 451 (480)
Q Consensus 401 ~~~~~~~~-a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~~~ 451 (480)
....++.+ +++++|.||++++-....++ ++++...+++..+|+|.-++-.
T Consensus 82 ~~~~~~~~~~~~~aDvVilavp~~~~~~v-l~~l~~~l~~~~iv~d~~Svk~ 132 (314)
T 3ggo_A 82 EGTTSIAKVEDFSPDFVMLSSPVRTFREI-AKKLSYILSEDATVTDQGSVKG 132 (314)
T ss_dssp EEESCTTGGGGGCCSEEEECSCGGGHHHH-HHHHHHHSCTTCEEEECCSCCT
T ss_pred hhcCCHHHHhhccCCEEEEeCCHHHHHHH-HHHHhhccCCCcEEEECCCCcH
Confidence 34567888 89999999999987765442 4567777777779999887653
No 373
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=96.42 E-value=0.015 Score=59.88 Aligned_cols=111 Identities=18% Similarity=0.183 Sum_probs=74.4
Q ss_pred CCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcc------c
Q 011641 323 SNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPT------M 396 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 396 (480)
..-||+|+|+.| -.+.++..|.+.|.+|.+||-.-..-+.... ...|+. .|.... .
T Consensus 7 ~~~~~~vIGlG~----------vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~-------g~~~~~-epgl~~~~~~~~~ 68 (446)
T 4a7p_A 7 GSVRIAMIGTGY----------VGLVSGACFSDFGHEVVCVDKDARKIELLHQ-------NVMPIY-EPGLDALVASNVK 68 (446)
T ss_dssp CCCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSCSTTHHHHTT-------TCCSSC-CTTHHHHHHHHHH
T ss_pred CceEEEEEcCCH----------HHHHHHHHHHHCCCEEEEEeCCHHHHHHHhc-------CCCCcc-CCCHHHHHHhhcc
Confidence 356999999988 7899999999999999999986654332221 011110 000000 1
Q ss_pred ccceEEecCHHhhcccccEEEEEecCcc---cccccH-------HHHHHhcCCCCEEEEcCCCCC
Q 011641 397 VKQVSVVWDAYEATKDAHGVCILTEWDE---FKTLDY-------QRIYDNMQKPAFVFDGRNVVD 451 (480)
Q Consensus 397 ~~~~~~~~~~~~a~~~ad~vvi~t~~~~---~~~~~~-------~~~~~~~~~~~~viD~~~~~~ 451 (480)
..++++++++.+++++||+++++++-|. ....|. +.+...+++..+||+...+..
T Consensus 69 ~g~l~~ttd~~ea~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~p 133 (446)
T 4a7p_A 69 AGRLSFTTDLAEGVKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVPV 133 (446)
T ss_dssp TTCEEEESCHHHHHTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCT
T ss_pred cCCEEEECCHHHHHhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCc
Confidence 2357888999999999999999965543 223332 456666777779999876553
No 374
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.41 E-value=0.012 Score=56.48 Aligned_cols=71 Identities=27% Similarity=0.426 Sum_probs=54.3
Q ss_pred cEEEEECCCh-hHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGAGY-VGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGlG~-~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.++.|||.|. +|.++|..|... |..|+++++. |.++++.++.||
T Consensus 162 k~vvVIG~s~iVG~p~A~lL~~~--gAtVtv~hs~---------------------------------t~~L~~~~~~AD 206 (285)
T 3l07_A 162 AYAVVVGASNVVGKPVSQLLLNA--KATVTTCHRF---------------------------------TTDLKSHTTKAD 206 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT--TCEEEEECTT---------------------------------CSSHHHHHTTCS
T ss_pred CEEEEECCCchhHHHHHHHHHHC--CCeEEEEeCC---------------------------------chhHHHhcccCC
Confidence 4799999876 799999999998 8899998642 235567789999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEec
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKS 127 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~S 127 (480)
+||.+++.|.-. . ...++++.+||+.+
T Consensus 207 IVI~Avg~p~~I---------~-----------~~~vk~GavVIDvg 233 (285)
T 3l07_A 207 ILIVAVGKPNFI---------T-----------ADMVKEGAVVIDVG 233 (285)
T ss_dssp EEEECCCCTTCB---------C-----------GGGSCTTCEEEECC
T ss_pred EEEECCCCCCCC---------C-----------HHHcCCCcEEEEec
Confidence 999999876321 1 13468899888754
No 375
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=96.39 E-value=0.013 Score=56.27 Aligned_cols=73 Identities=27% Similarity=0.392 Sum_probs=55.2
Q ss_pred cEEEEECCCh-hHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGAGY-VGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGlG~-~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.++.|||.|. +|.++|..|... |..|+++.+. |.++++.++.||
T Consensus 162 k~vvVvGrs~iVG~plA~lL~~~--gAtVtv~hs~---------------------------------T~~L~~~~~~AD 206 (286)
T 4a5o_A 162 MDAVVVGASNIVGRPMALELLLG--GCTVTVTHRF---------------------------------TRDLADHVSRAD 206 (286)
T ss_dssp CEEEEECTTSTTHHHHHHHHHHT--TCEEEEECTT---------------------------------CSCHHHHHHTCS
T ss_pred CEEEEECCCchhHHHHHHHHHHC--CCeEEEEeCC---------------------------------CcCHHHHhccCC
Confidence 4799999765 899999999998 8999998642 134566789999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCC
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTV 129 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv 129 (480)
+||.+++.|.-. . ...++++.+||+.+..
T Consensus 207 IVI~Avg~p~~I---------~-----------~~~vk~GavVIDvgi~ 235 (286)
T 4a5o_A 207 LVVVAAGKPGLV---------K-----------GEWIKEGAIVIDVGIN 235 (286)
T ss_dssp EEEECCCCTTCB---------C-----------GGGSCTTCEEEECCSC
T ss_pred EEEECCCCCCCC---------C-----------HHHcCCCeEEEEeccc
Confidence 999999876321 1 1456889999875543
No 376
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=96.38 E-value=0.00075 Score=62.53 Aligned_cols=68 Identities=15% Similarity=0.229 Sum_probs=46.5
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc-cC
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS-EA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-~a 79 (480)
++|+|||+|.+|..++..+.... |++++ ++|.|+++......+ . .+...+++++.++ +.
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~i~g-v-----------------~V~~~~dl~ell~~~I 141 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVGRPVRG-G-----------------VIEHVDLLPQRVPGRI 141 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCEETT-E-----------------EEEEGGGHHHHSTTTC
T ss_pred CEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhhhcC-C-----------------eeecHHhHHHHHHcCC
Confidence 58999999999999998643333 67655 579988765332211 0 1223567777654 58
Q ss_pred cEEEEeccC
Q 011641 80 DIVFVSVNT 88 (480)
Q Consensus 80 DvVii~Vpt 88 (480)
|+|++|+|+
T Consensus 142 D~ViIA~Ps 150 (211)
T 2dt5_A 142 EIALLTVPR 150 (211)
T ss_dssp CEEEECSCH
T ss_pred CEEEEeCCc
Confidence 999999884
No 377
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=96.35 E-value=0.0035 Score=54.35 Aligned_cols=107 Identities=17% Similarity=0.133 Sum_probs=72.6
Q ss_pred CCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceEEe
Q 011641 324 NKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVSVV 403 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (480)
.++|+|+|++-++ ++.+..+++.|.+.|++|...||....+++ .++...
T Consensus 13 p~~IavIGas~~~------g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i-------------------------~G~~~~ 61 (145)
T 2duw_A 13 TRTIALVGASDKP------DRPSYRVMKYLLDQGYHVIPVSPKVAGKTL-------------------------LGQQGY 61 (145)
T ss_dssp CCCEEEESCCSCT------TSHHHHHHHHHHHHTCCEEEECSSSTTSEE-------------------------TTEECC
T ss_pred CCEEEEECcCCCC------CChHHHHHHHHHHCCCEEEEeCCccccccc-------------------------CCeecc
Confidence 5689999998776 468889999999999999999997521111 235556
Q ss_pred cCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCCCChh---hhhhcCcEEEE
Q 011641 404 WDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNVVDAN---KLREIGFIVYS 464 (480)
Q Consensus 404 ~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~~~~~---~~~~~g~~y~~ 464 (480)
.|+.+..+..|+++|+++-+.-.+ -..++.+. ....++++.. .+..+ .+++.|++|.|
T Consensus 62 ~sl~el~~~~Dlvii~vp~~~v~~-v~~~~~~~-g~~~i~i~~~-~~~~~l~~~a~~~Gi~~ig 122 (145)
T 2duw_A 62 ATLADVPEKVDMVDVFRNSEAAWG-VAQEAIAI-GAKTLWLQLG-VINEQAAVLAREAGLSVVM 122 (145)
T ss_dssp SSTTTCSSCCSEEECCSCSTHHHH-HHHHHHHH-TCCEEECCTT-CCCHHHHHHHHTTTCEEEC
T ss_pred CCHHHcCCCCCEEEEEeCHHHHHH-HHHHHHHc-CCCEEEEcCC-hHHHHHHHHHHHcCCEEEc
Confidence 677777778999999998433222 12334443 3345777764 44432 34567999865
No 378
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=96.33 E-value=0.0091 Score=58.58 Aligned_cols=93 Identities=17% Similarity=0.167 Sum_probs=70.4
Q ss_pred cCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccce
Q 011641 321 TVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+. .-+..+++.|...|++|.+|||...... +
T Consensus 141 ~l~g~~vgIIG~G----------~IG~~~A~~l~~~G~~V~~~d~~~~~~~----------------------------~ 182 (311)
T 2cuk_A 141 DLQGLTLGLVGMG----------RIGQAVAKRALAFGMRVVYHARTPKPLP----------------------------Y 182 (311)
T ss_dssp CCTTCEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSSCCSSS----------------------------S
T ss_pred CCCCCEEEEEEEC----------HHHHHHHHHHHHCCCEEEEECCCCcccc----------------------------c
Confidence 5688999999984 4788999999999999999999754321 1
Q ss_pred EEecCHHhhcccccEEEEEecCc-cccc-ccHHHHHHhcCCCCEEEEcCC--CCChh
Q 011641 401 SVVWDAYEATKDAHGVCILTEWD-EFKT-LDYQRIYDNMQKPAFVFDGRN--VVDAN 453 (480)
Q Consensus 401 ~~~~~~~~a~~~ad~vvi~t~~~-~~~~-~~~~~~~~~~~~~~~viD~~~--~~~~~ 453 (480)
. ..++++.++++|+|+++++.. +.++ ++ .+....|++..++||+-+ +.+.+
T Consensus 183 ~-~~~l~ell~~aDvV~l~~p~~~~t~~li~-~~~l~~mk~ga~lin~srg~~vd~~ 237 (311)
T 2cuk_A 183 P-FLSLEELLKEADVVSLHTPLTPETHRLLN-RERLFAMKRGAILLNTARGALVDTE 237 (311)
T ss_dssp C-BCCHHHHHHHCSEEEECCCCCTTTTTCBC-HHHHTTSCTTCEEEECSCGGGBCHH
T ss_pred c-cCCHHHHHhhCCEEEEeCCCChHHHhhcC-HHHHhhCCCCcEEEECCCCCccCHH
Confidence 1 247888999999999998775 3444 33 345678888789999977 44543
No 379
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=96.32 E-value=0.0064 Score=57.88 Aligned_cols=102 Identities=16% Similarity=0.159 Sum_probs=72.5
Q ss_pred CCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCE-EEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceE
Q 011641 323 SNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKAR-LSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVS 401 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~-V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (480)
...+|+|+|... .+..++..|.+.|.+ |.+||+.....+.... ..++.
T Consensus 9 ~~m~i~iiG~G~----------mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~---------------------~~g~~ 57 (266)
T 3d1l_A 9 EDTPIVLIGAGN----------LATNLAKALYRKGFRIVQVYSRTEESARELAQ---------------------KVEAE 57 (266)
T ss_dssp GGCCEEEECCSH----------HHHHHHHHHHHHTCCEEEEECSSHHHHHHHHH---------------------HTTCE
T ss_pred CCCeEEEEcCCH----------HHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHH---------------------HcCCc
Confidence 346899999754 678899999999998 9999985432211111 01355
Q ss_pred EecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCCCChhhhh
Q 011641 402 VVWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNVVDANKLR 456 (480)
Q Consensus 402 ~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~~~~~~~~ 456 (480)
...+++++++++|+|+++++.+...++ .+.+...+++..+|+|+.+.+..+.+.
T Consensus 58 ~~~~~~~~~~~~Dvvi~av~~~~~~~v-~~~l~~~~~~~~ivv~~s~~~~~~~l~ 111 (266)
T 3d1l_A 58 YTTDLAEVNPYAKLYIVSLKDSAFAEL-LQGIVEGKREEALMVHTAGSIPMNVWE 111 (266)
T ss_dssp EESCGGGSCSCCSEEEECCCHHHHHHH-HHHHHTTCCTTCEEEECCTTSCGGGST
T ss_pred eeCCHHHHhcCCCEEEEecCHHHHHHH-HHHHHhhcCCCcEEEECCCCCchHHHH
Confidence 667888889999999999988765432 245555565566999999988766554
No 380
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=96.30 E-value=0.0049 Score=59.28 Aligned_cols=67 Identities=13% Similarity=0.133 Sum_probs=51.1
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCC-eEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
+++.|||+|.+|.+++..|++. |. +|++++|+.++.+.+.+.. + ..+..+.. +.++|
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~--G~~~i~v~nRt~~ka~~la~~~-----------------~-~~~~~~~~--~~~~D 177 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNS--GFEKLKIYARNVKTGQYLAALY-----------------G-YAYINSLE--NQQAD 177 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHT--TCCCEEEECSCHHHHHHHHHHH-----------------T-CEEESCCT--TCCCS
T ss_pred CEEEEECCcHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHc-----------------C-Cccchhhh--cccCC
Confidence 4799999999999999999998 76 8999999999988876420 0 12222222 46899
Q ss_pred EEEEeccCCC
Q 011641 81 IVFVSVNTPT 90 (480)
Q Consensus 81 vVii~Vptp~ 90 (480)
+||-|+|.+.
T Consensus 178 ivInaTp~gm 187 (271)
T 1npy_A 178 ILVNVTSIGM 187 (271)
T ss_dssp EEEECSSTTC
T ss_pred EEEECCCCCc
Confidence 9999988654
No 381
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=96.30 E-value=0.022 Score=59.54 Aligned_cols=113 Identities=20% Similarity=0.230 Sum_probs=69.3
Q ss_pred cEEEEECCChhHHH-HHHHHHHcCCCCeEEEEECCHH-HHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccC
Q 011641 2 VKICCIGAGYVGGP-TMAVIALKCPSIEVAVVDISVS-RINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~La~~~~G~~V~~~D~~~~-~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
++|.|||+|..|.+ +|..|.++ |++|+++|..+. ..+.|.+...++. .-.+.+ .+.++
T Consensus 23 ~~v~viGiG~sG~s~~A~~l~~~--G~~V~~~D~~~~~~~~~l~~~gi~~~-----------------~g~~~~-~~~~~ 82 (494)
T 4hv4_A 23 RHIHFVGIGGAGMGGIAEVLANE--GYQISGSDLAPNSVTQHLTALGAQIY-----------------FHHRPE-NVLDA 82 (494)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHT--TCEEEEECSSCCHHHHHHHHTTCEEE-----------------SSCCGG-GGTTC
T ss_pred CEEEEEEEcHhhHHHHHHHHHhC--CCeEEEEECCCCHHHHHHHHCCCEEE-----------------CCCCHH-HcCCC
Confidence 68999999999996 89999998 999999998643 3344543222211 112333 36789
Q ss_pred cEEEEeccCCCCCCCCCCCCCCChHHHHHHH----------HHHHhhCCCCcEEEEecCCCcchHHH-HHHHHHhcC
Q 011641 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAA----------RVIADVSKSDKIVVEKSTVPVKTAEA-IEKILTHNS 145 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~----------~~i~~~l~~~~iVi~~STv~~gt~~~-l~~~l~~~~ 145 (480)
|+||++-.-|. |...+..+. +-+...++...+|.+..|..-.||.. +..+|++.+
T Consensus 83 d~vV~Spgi~~-----------~~p~~~~a~~~gi~v~~~~e~l~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g 148 (494)
T 4hv4_A 83 SVVVVSTAISA-----------DNPEIVAAREARIPVIRRAEMLAELMRYRHGIAVAGTHGKTTTTAMLSSIYAEAG 148 (494)
T ss_dssp SEEEECTTSCT-----------TCHHHHHHHHTTCCEEEHHHHHHHHHTTSEEEEEECSSSHHHHHHHHHHHHHHTT
T ss_pred CEEEECCCCCC-----------CCHHHHHHHHCCCCEEcHHHHHHHHhcCCCEEEEecCCChHHHHHHHHHHHHhcC
Confidence 99988733222 112233322 12334444445777777776666655 567787653
No 382
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=96.29 E-value=0.004 Score=62.10 Aligned_cols=33 Identities=27% Similarity=0.509 Sum_probs=26.9
Q ss_pred CcEEEEEC-CChhHHHHHHHHHHcCCCCeEEEEEC
Q 011641 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDI 34 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~ 34 (480)
||||+|+| .|++|..+...|.++ +..+++.+..
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~-p~~elv~v~s 37 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSH-PYLEVKQVTS 37 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC-TTEEEEEEBC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcC-CCcEEEEEEC
Confidence 36899999 699999999999876 4568776654
No 383
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=96.28 E-value=0.0079 Score=58.17 Aligned_cols=108 Identities=12% Similarity=0.124 Sum_probs=73.4
Q ss_pred CeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceEEec
Q 011641 325 KKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVSVVW 404 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (480)
.+|+|+|+.. -+..++..|.+.|.+|.+||+.....+.... .++....
T Consensus 6 m~i~iiG~G~----------~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~----------------------~g~~~~~ 53 (299)
T 1vpd_A 6 MKVGFIGLGI----------MGKPMSKNLLKAGYSLVVSDRNPEAIADVIA----------------------AGAETAS 53 (299)
T ss_dssp CEEEEECCST----------THHHHHHHHHHTTCEEEEECSCHHHHHHHHH----------------------TTCEECS
T ss_pred ceEEEECchH----------HHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH----------------------CCCeecC
Confidence 3899999754 6788999999999999999986433221111 1355667
Q ss_pred CHHhhcccccEEEEEecCcc-cccccH--HHHHHhcCCCCEEEEcCCCCCh--hh----hhhcCcEEEE
Q 011641 405 DAYEATKDAHGVCILTEWDE-FKTLDY--QRIYDNMQKPAFVFDGRNVVDA--NK----LREIGFIVYS 464 (480)
Q Consensus 405 ~~~~a~~~ad~vvi~t~~~~-~~~~~~--~~~~~~~~~~~~viD~~~~~~~--~~----~~~~g~~y~~ 464 (480)
++.++++++|+|+++++.+. .+..-. +.+...+++..+|+|..+.... +. +.+.|+.|..
T Consensus 54 ~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~ 122 (299)
T 1vpd_A 54 TAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLD 122 (299)
T ss_dssp SHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred CHHHHHhCCCEEEEECCCHHHHHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 88899999999999998654 332110 2345566666699999887642 22 2334666654
No 384
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.24 E-value=0.0077 Score=59.95 Aligned_cols=95 Identities=17% Similarity=0.284 Sum_probs=59.1
Q ss_pred CcEEEEEC-CChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEe-cCHHHhhcc
Q 011641 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFS-TDVEKHVSE 78 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t-~d~~~a~~~ 78 (480)
|.||+||| .|++|.-+...|.++ |..++..+.-.... |+ .+.+...... ..+++. .+.++...+
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~h-P~~el~~l~S~~~a------G~------~~~~~~p~~~-~~l~~~~~~~~~~~~~ 78 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNH-PEAKITYLSSRTYA------GK------KLEEIFPSTL-ENSILSEFDPEKVSKN 78 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHC-TTEEEEEEECSTTT------TS------BHHHHCGGGC-CCCBCBCCCHHHHHHH
T ss_pred eeEEEEECCCCHHHHHHHHHHHcC-CCcEEEEEeCcccc------cC------ChHHhChhhc-cCceEEeCCHHHhhcC
Confidence 57999998 699999999999987 67788776643211 10 0111100000 112222 244443478
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCC
Q 011641 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTV 129 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv 129 (480)
+|++|+|+|.. +.+.+.+.+ .+..||+.|+-
T Consensus 79 ~Dvvf~alp~~-------------------~s~~~~~~~-~g~~VIDlSsd 109 (351)
T 1vkn_A 79 CDVLFTALPAG-------------------ASYDLVREL-KGVKIIDLGAD 109 (351)
T ss_dssp CSEEEECCSTT-------------------HHHHHHTTC-CSCEEEESSST
T ss_pred CCEEEECCCcH-------------------HHHHHHHHh-CCCEEEECChh
Confidence 99999998742 345566666 78899988763
No 385
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=96.23 E-value=0.0065 Score=60.75 Aligned_cols=31 Identities=26% Similarity=0.515 Sum_probs=26.7
Q ss_pred cEEEEEC-CChhHHHHHHHHHHcCCCCeEEEEE
Q 011641 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVD 33 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D 33 (480)
|||+|+| .|++|..++..|.++ +.++|+.+.
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~-p~~ev~~i~ 40 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADH-PMFELTALA 40 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTC-SSEEEEEEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcC-CCCEEEEEE
Confidence 6999999 899999999999876 567887774
No 386
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.23 E-value=0.017 Score=59.56 Aligned_cols=109 Identities=13% Similarity=0.072 Sum_probs=72.6
Q ss_pred CeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcc------ccc
Q 011641 325 KKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPT------MVK 398 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 398 (480)
.||+|+|+.| -.+.++..|.+.|.+|.+||..-..-+.... + ..|.. .+.... ...
T Consensus 3 mkI~VIG~G~----------vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~-g------~~~i~-e~gl~~~l~~~~~~~ 64 (450)
T 3gg2_A 3 LDIAVVGIGY----------VGLVSATCFAELGANVRCIDTDRNKIEQLNS-G------TIPIY-EPGLEKMIARNVKAG 64 (450)
T ss_dssp CEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-T------CSCCC-STTHHHHHHHHHHTT
T ss_pred CEEEEECcCH----------HHHHHHHHHHhcCCEEEEEECCHHHHHHHHc-C------CCccc-CCCHHHHHHhhcccC
Confidence 4899999987 7899999999999999999986433222111 1 01110 000000 023
Q ss_pred ceEEecCHHhhcccccEEEEEecCcc--cccc-------cHHHHHHhcCCCCEEEEcCCCCC
Q 011641 399 QVSVVWDAYEATKDAHGVCILTEWDE--FKTL-------DYQRIYDNMQKPAFVFDGRNVVD 451 (480)
Q Consensus 399 ~~~~~~~~~~a~~~ad~vvi~t~~~~--~~~~-------~~~~~~~~~~~~~~viD~~~~~~ 451 (480)
++.+++++.++++++|+++++++-+. .... -.+.+...+++..+|++...+..
T Consensus 65 ~l~~t~d~~ea~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~p 126 (450)
T 3gg2_A 65 RLRFGTEIEQAVPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVPV 126 (450)
T ss_dssp SEEEESCHHHHGGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCT
T ss_pred cEEEECCHHHHHhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeCCC
Confidence 57788999999999999999997762 1111 23466667777779999987554
No 387
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=96.22 E-value=0.022 Score=54.88 Aligned_cols=121 Identities=12% Similarity=0.043 Sum_probs=75.5
Q ss_pred CCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhh-----hccccCCCCCCCCCCCCccccc
Q 011641 324 NKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDL-----TMNKFDWDHPLHLQPMSPTMVK 398 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 398 (480)
-++|+|+|.. +....++..|.+.|++|.+||+.....+..... ...-..+..- ..........
T Consensus 4 ~~kV~VIGaG----------~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~--~~~~~~~~~~ 71 (283)
T 4e12_A 4 ITNVTVLGTG----------VLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGA--ADGAAQKALG 71 (283)
T ss_dssp CCEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTC--TTTHHHHHHH
T ss_pred CCEEEEECCC----------HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccC--CHHHHHHHHc
Confidence 4699999974 478999999999999999999865432211110 0000000000 0000000113
Q ss_pred ceEEecCHHhhcccccEEEEEecCc-ccccccHHHHHHhcCCCCEEEEcCCCCChhhhh
Q 011641 399 QVSVVWDAYEATKDAHGVCILTEWD-EFKTLDYQRIYDNMQKPAFVFDGRNVVDANKLR 456 (480)
Q Consensus 399 ~~~~~~~~~~a~~~ad~vvi~t~~~-~~~~~~~~~~~~~~~~~~~viD~~~~~~~~~~~ 456 (480)
.+....++.++++++|.||+++.-+ +.+.--++++...+++..+|++..+.++...+.
T Consensus 72 ~i~~~~~~~~~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~~la 130 (283)
T 4e12_A 72 GIRYSDDLAQAVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSDLV 130 (283)
T ss_dssp HCEEESCHHHHTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHH
T ss_pred CeEEeCCHHHHhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHHHHH
Confidence 4677889999999999999998765 233333567777777777889887777765443
No 388
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.20 E-value=0.0071 Score=58.44 Aligned_cols=66 Identities=8% Similarity=0.141 Sum_probs=50.6
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCC-eEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.++.|+|+|.+|.+++..|++. |. +|++++|++++.+.+.+.. ......++.+ + ++|
T Consensus 123 k~vlvlGaGGaaraia~~L~~~--G~~~v~v~nRt~~ka~~La~~~------------------~~~~~~~l~~-l-~~D 180 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDN--FAKDIYVVTRNPEKTSEIYGEF------------------KVISYDELSN-L-KGD 180 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHT--TCSEEEEEESCHHHHHHHCTTS------------------EEEEHHHHTT-C-CCS
T ss_pred CEEEEECCcHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHhc------------------CcccHHHHHh-c-cCC
Confidence 4799999999999999999998 87 8999999999998887531 0111122333 4 899
Q ss_pred EEEEeccCC
Q 011641 81 IVFVSVNTP 89 (480)
Q Consensus 81 vVii~Vptp 89 (480)
+||-|+|..
T Consensus 181 ivInaTp~G 189 (282)
T 3fbt_A 181 VIINCTPKG 189 (282)
T ss_dssp EEEECSSTT
T ss_pred EEEECCccC
Confidence 999997753
No 389
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=96.20 E-value=0.0058 Score=60.67 Aligned_cols=92 Identities=21% Similarity=0.172 Sum_probs=67.2
Q ss_pred CCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCCh-HHHHHhhhccccCCCCCCCCCCCCcccccceE
Q 011641 323 SNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTE-DQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVS 401 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (480)
++.+|+|+|+. +-+..++..|.+.|.+|.+||+.... .+..... ++.
T Consensus 15 ~~~~I~IIG~G----------~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~----------------------G~~ 62 (338)
T 1np3_A 15 QGKKVAIIGYG----------SQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAH----------------------GLK 62 (338)
T ss_dssp HTSCEEEECCS----------HHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHT----------------------TCE
T ss_pred cCCEEEEECch----------HHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHC----------------------CCE
Confidence 46789999974 47889999999999999999997654 2222221 234
Q ss_pred EecCHHhhcccccEEEEEecCcccccccHH-HHHHhcCCCCEEEEcCC
Q 011641 402 VVWDAYEATKDAHGVCILTEWDEFKTLDYQ-RIYDNMQKPAFVFDGRN 448 (480)
Q Consensus 402 ~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~-~~~~~~~~~~~viD~~~ 448 (480)
.. ++.++++++|+|+++++.....++ ++ ++...+++..+|+|..+
T Consensus 63 ~~-~~~e~~~~aDvVilavp~~~~~~v-~~~~i~~~l~~~~ivi~~~g 108 (338)
T 1np3_A 63 VA-DVKTAVAAADVVMILTPDEFQGRL-YKEEIEPNLKKGATLAFAHG 108 (338)
T ss_dssp EE-CHHHHHHTCSEEEECSCHHHHHHH-HHHHTGGGCCTTCEEEESCC
T ss_pred Ec-cHHHHHhcCCEEEEeCCcHHHHHH-HHHHHHhhCCCCCEEEEcCC
Confidence 44 788899999999999988765432 22 55556766668999865
No 390
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=96.19 E-value=0.025 Score=58.78 Aligned_cols=101 Identities=14% Similarity=0.022 Sum_probs=72.6
Q ss_pred cCcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCccccc
Q 011641 319 FNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVK 398 (480)
Q Consensus 319 ~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (480)
+..+.+++|+|+|+.- -...+++.|...|++|.+|||.......... .
T Consensus 272 g~~L~GktVgIIG~G~----------IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~----------------------~ 319 (494)
T 3d64_A 272 DVMIAGKIAVVAGYGD----------VGKGCAQSLRGLGATVWVTEIDPICALQAAM----------------------E 319 (494)
T ss_dssp CCCCTTCEEEEECCSH----------HHHHHHHHHHTTTCEEEEECSCHHHHHHHHT----------------------T
T ss_pred ccccCCCEEEEEccCH----------HHHHHHHHHHHCCCEEEEEeCChHhHHHHHH----------------------c
Confidence 4468999999999743 6788999999999999999997654211111 1
Q ss_pred ceEEecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCC---CChhhh
Q 011641 399 QVSVVWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNV---VDANKL 455 (480)
Q Consensus 399 ~~~~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~---~~~~~~ 455 (480)
++.+ .+++++++.+|+|++++.-.. -++- +..+.|++.++|+|.-+- +|.+.+
T Consensus 320 G~~~-~~l~ell~~aDiVi~~~~t~~--lI~~-~~l~~MK~gAilINvgrg~veID~~aL 375 (494)
T 3d64_A 320 GYRV-VTMEYAADKADIFVTATGNYH--VINH-DHMKAMRHNAIVCNIGHFDSEIDVAST 375 (494)
T ss_dssp TCEE-CCHHHHTTTCSEEEECSSSSC--SBCH-HHHHHCCTTEEEEECSSSSCSBCCGGG
T ss_pred CCEe-CCHHHHHhcCCEEEECCCccc--ccCH-HHHhhCCCCcEEEEcCCCcchhchHHH
Confidence 2333 478999999999999983222 2443 456789988899998663 465555
No 391
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=96.19 E-value=0.042 Score=56.87 Aligned_cols=103 Identities=15% Similarity=0.054 Sum_probs=73.4
Q ss_pred cCcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCccccc
Q 011641 319 FNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVK 398 (480)
Q Consensus 319 ~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (480)
+..+.+++|+|+|++ .-...+++.|...|++|.+|||.......... .
T Consensus 252 ~~~l~GktVgIIG~G----------~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~----------------------~ 299 (479)
T 1v8b_A 252 DFLISGKIVVICGYG----------DVGKGCASSMKGLGARVYITEIDPICAIQAVM----------------------E 299 (479)
T ss_dssp CCCCTTSEEEEECCS----------HHHHHHHHHHHHHTCEEEEECSCHHHHHHHHT----------------------T
T ss_pred ccccCCCEEEEEeeC----------HHHHHHHHHHHhCcCEEEEEeCChhhHHHHHH----------------------c
Confidence 446899999999964 36788899999999999999998654211111 1
Q ss_pred ceEEecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCC---CChhhhhh
Q 011641 399 QVSVVWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNV---VDANKLRE 457 (480)
Q Consensus 399 ~~~~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~---~~~~~~~~ 457 (480)
++.+ .+++++++++|+|++++.-..+ ++- +..+.|++.++|+|.-+. ++.+.+.+
T Consensus 300 g~~~-~~l~ell~~aDiVi~~~~t~~l--I~~-~~l~~MK~gailiNvgrg~~EId~~aL~~ 357 (479)
T 1v8b_A 300 GFNV-VTLDEIVDKGDFFITCTGNVDV--IKL-EHLLKMKNNAVVGNIGHFDDEIQVNELFN 357 (479)
T ss_dssp TCEE-CCHHHHTTTCSEEEECCSSSSS--BCH-HHHTTCCTTCEEEECSSTTTSBCHHHHHT
T ss_pred CCEe-cCHHHHHhcCCEEEECCChhhh--cCH-HHHhhcCCCcEEEEeCCCCccccchhhhc
Confidence 2332 4789999999999999743332 443 455779988899998763 56555544
No 392
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=96.18 E-value=0.0062 Score=58.94 Aligned_cols=108 Identities=16% Similarity=0.191 Sum_probs=66.2
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
+++.|+|+|.+|.++|..|++. | +|++++|++++.+.+.+.......... .+ .+.++ +..+.+..+|+
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~--G-~V~v~~r~~~~~~~l~~~~~~~~~~~~--~~------~~d~~-~~~~~~~~~Di 196 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKD--N-NIIIANRTVEKAEALAKEIAEKLNKKF--GE------EVKFS-GLDVDLDGVDI 196 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSS--S-EEEEECSSHHHHHHHHHHHHHHHTCCH--HH------HEEEE-CTTCCCTTCCE
T ss_pred CEEEEECchHHHHHHHHHHHHC--C-CEEEEECCHHHHHHHHHHHhhhccccc--ce------eEEEe-eHHHhhCCCCE
Confidence 4799999999999999999998 9 999999999888776531000000000 00 12232 22345678999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcch
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKT 133 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt 133 (480)
+|-|+|.+...+ .+...+. -...++++.+|++.++.|..|
T Consensus 197 lVn~ag~~~~~~-------~~~~~~~-----~~~~l~~~~~v~Dv~y~p~~t 236 (287)
T 1nvt_A 197 IINATPIGMYPN-------IDVEPIV-----KAEKLREDMVVMDLIYNPLET 236 (287)
T ss_dssp EEECSCTTCTTC-------CSSCCSS-----CSTTCCSSSEEEECCCSSSSC
T ss_pred EEECCCCCCCCC-------CCCCCCC-----CHHHcCCCCEEEEeeeCCccC
Confidence 999987543210 0000000 013466788899888765443
No 393
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=96.18 E-value=0.019 Score=56.54 Aligned_cols=122 Identities=8% Similarity=0.006 Sum_probs=75.7
Q ss_pred CCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHh-----hhccccCCCCCCCCCCCCccccc
Q 011641 324 NKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRD-----LTMNKFDWDHPLHLQPMSPTMVK 398 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 398 (480)
-++|+|+|+. .....++..|.++|++|.+||+.-...+.... +...-..+..+. .........
T Consensus 6 ~~kI~vIGaG----------~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g--~~~~~~~~~ 73 (319)
T 2dpo_A 6 AGDVLIVGSG----------LVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKG--SLSAEEQLS 73 (319)
T ss_dssp -CEEEEECCS----------HHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCS--SSCHHHHHH
T ss_pred CceEEEEeeC----------HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCcccc--ccchHHHhh
Confidence 4699999985 47889999999999999999996543221110 000000000000 000001123
Q ss_pred ceEEecCHHhhcccccEEEEEecCc-ccccccHHHHHHhcCCCCEEEEcCCCCChhhhhh
Q 011641 399 QVSVVWDAYEATKDAHGVCILTEWD-EFKTLDYQRIYDNMQKPAFVFDGRNVVDANKLRE 457 (480)
Q Consensus 399 ~~~~~~~~~~a~~~ad~vvi~t~~~-~~~~~~~~~~~~~~~~~~~viD~~~~~~~~~~~~ 457 (480)
++++++++.+++++||.|++++.-+ +.+.--+.++...+++..+|++...-+....+.+
T Consensus 74 ~i~~~~~~~eav~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~~la~ 133 (319)
T 2dpo_A 74 LISSCTNLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFT 133 (319)
T ss_dssp TEEEECCHHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHT
T ss_pred ceEEeCCHHHHHhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHHHHHH
Confidence 5788899999999999999998753 2333234567777776667888877777655543
No 394
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=96.18 E-value=0.0053 Score=61.85 Aligned_cols=99 Identities=14% Similarity=0.178 Sum_probs=71.7
Q ss_pred cCcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCccccc
Q 011641 319 FNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVK 398 (480)
Q Consensus 319 ~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (480)
+..+.+++|+|+|++ .-...+++.|...|++|.+|||..... ..
T Consensus 111 ~~~l~g~tvGIIGlG----------~IG~~vA~~l~~~G~~V~~~d~~~~~~----~~---------------------- 154 (380)
T 2o4c_A 111 GADLAERTYGVVGAG----------QVGGRLVEVLRGLGWKVLVCDPPRQAR----EP---------------------- 154 (380)
T ss_dssp TCCGGGCEEEEECCS----------HHHHHHHHHHHHTTCEEEEECHHHHHH----ST----------------------
T ss_pred hcccCCCEEEEEeCC----------HHHHHHHHHHHHCCCEEEEEcCChhhh----cc----------------------
Confidence 446789999999974 477899999999999999999853211 11
Q ss_pred ceEEecCHHhhcccccEEEEEecCcc-----ccc-ccHHHHHHhcCCCCEEEEcCC--CCChhhh
Q 011641 399 QVSVVWDAYEATKDAHGVCILTEWDE-----FKT-LDYQRIYDNMQKPAFVFDGRN--VVDANKL 455 (480)
Q Consensus 399 ~~~~~~~~~~a~~~ad~vvi~t~~~~-----~~~-~~~~~~~~~~~~~~~viD~~~--~~~~~~~ 455 (480)
+.. ..++++.++++|+|+++++... -++ ++ ..+.+.|++..++||+-+ +.+.+.+
T Consensus 155 g~~-~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~-~~~l~~mk~gailIN~sRG~vvd~~aL 217 (380)
T 2o4c_A 155 DGE-FVSLERLLAEADVISLHTPLNRDGEHPTRHLLD-EPRLAALRPGTWLVNASRGAVVDNQAL 217 (380)
T ss_dssp TSC-CCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBC-HHHHHTSCTTEEEEECSCGGGBCHHHH
T ss_pred Ccc-cCCHHHHHHhCCEEEEeccCccccccchhhhcC-HHHHhhCCCCcEEEECCCCcccCHHHH
Confidence 111 2478899999999999987643 222 44 456788888789999876 5565433
No 395
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=96.16 E-value=0.012 Score=58.28 Aligned_cols=98 Identities=15% Similarity=0.139 Sum_probs=72.5
Q ss_pred cCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccce
Q 011641 321 TVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+. .-...+++.|...|++|.+|||..... . . ..+
T Consensus 143 ~l~g~~vgIiG~G----------~IG~~~A~~l~~~G~~V~~~d~~~~~~-~-~-----------------------~~~ 187 (331)
T 1xdw_A 143 EVRNCTVGVVGLG----------RIGRVAAQIFHGMGATVIGEDVFEIKG-I-E-----------------------DYC 187 (331)
T ss_dssp CGGGSEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSSCCCS-C-T-----------------------TTC
T ss_pred CCCCCEEEEECcC----------HHHHHHHHHHHHCCCEEEEECCCccHH-H-H-----------------------hcc
Confidence 4678899999984 478899999999999999999976432 1 1 012
Q ss_pred EEecCHHhhcccccEEEEEecCc-cccc-ccHHHHHHhcCCCCEEEEcCC--CCChhhh
Q 011641 401 SVVWDAYEATKDAHGVCILTEWD-EFKT-LDYQRIYDNMQKPAFVFDGRN--VVDANKL 455 (480)
Q Consensus 401 ~~~~~~~~a~~~ad~vvi~t~~~-~~~~-~~~~~~~~~~~~~~~viD~~~--~~~~~~~ 455 (480)
.+ .++++.++++|+|+++++.. +-++ ++ .+..+.|++.+++||+-+ +++.+.+
T Consensus 188 ~~-~~l~ell~~aDvV~~~~p~t~~t~~li~-~~~l~~mk~ga~lin~srg~~vd~~aL 244 (331)
T 1xdw_A 188 TQ-VSLDEVLEKSDIITIHAPYIKENGAVVT-RDFLKKMKDGAILVNCARGQLVDTEAV 244 (331)
T ss_dssp EE-CCHHHHHHHCSEEEECCCCCTTTCCSBC-HHHHHTSCTTEEEEECSCGGGBCHHHH
T ss_pred cc-CCHHHHHhhCCEEEEecCCchHHHHHhC-HHHHhhCCCCcEEEECCCcccccHHHH
Confidence 33 37889999999999988764 3334 34 456678988889999976 5665433
No 396
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.14 E-value=0.0034 Score=62.96 Aligned_cols=33 Identities=21% Similarity=0.270 Sum_probs=31.3
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCH
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV 36 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~ 36 (480)
|||.|||+|..|+.+|..|+++ |++|+++|+++
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~--G~~v~v~Er~~ 34 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH--GIKVTIYERNS 34 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCCEEEEecCC
Confidence 8999999999999999999998 99999999864
No 397
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=96.13 E-value=0.061 Score=54.73 Aligned_cols=118 Identities=12% Similarity=0.083 Sum_probs=78.2
Q ss_pred HHHHhcCcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCC
Q 011641 314 VVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMS 393 (480)
Q Consensus 314 ~~~~l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (480)
+.+..+..+.+++|+|+|..- -...+++.|...|++|.++|+.-........
T Consensus 210 i~rat~~~L~GktV~ViG~G~----------IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~------------------ 261 (435)
T 3gvp_A 210 LKRTTDMMFGGKQVVVCGYGE----------VGKGCCAALKAMGSIVYVTEIDPICALQACM------------------ 261 (435)
T ss_dssp HHHHHCCCCTTCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSCHHHHHHHHH------------------
T ss_pred HHHhhCceecCCEEEEEeeCH----------HHHHHHHHHHHCCCEEEEEeCChhhhHHHHH------------------
Confidence 344445567999999999743 7899999999999999999964321111111
Q ss_pred cccccceEEecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCC---CChhhhhhcCcEEEEecC
Q 011641 394 PTMVKQVSVVWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNV---VDANKLREIGFIVYSIGK 467 (480)
Q Consensus 394 ~~~~~~~~~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~---~~~~~~~~~g~~y~~iG~ 467 (480)
.+..+ .+++++++++|+++.++..+.. ++.+ ..+.|++.++|++.-+- ++.+.+...++.+..+..
T Consensus 262 ----~G~~v-~~Leeal~~ADIVi~atgt~~l--I~~e-~l~~MK~gailINvgrg~~EId~~~L~~~~~~~~~ir~ 330 (435)
T 3gvp_A 262 ----DGFRL-VKLNEVIRQVDIVITCTGNKNV--VTRE-HLDRMKNSCIVCNMGHSNTEIDVASLRTPELTWERVRS 330 (435)
T ss_dssp ----TTCEE-CCHHHHTTTCSEEEECSSCSCS--BCHH-HHHHSCTTEEEEECSSTTTTBTGGGGCSTTCEEEEEET
T ss_pred ----cCCEe-ccHHHHHhcCCEEEECCCCccc--CCHH-HHHhcCCCcEEEEecCCCccCCHHHHHhhcceeEEEEc
Confidence 12222 4789999999999997654432 4444 45678887799998653 344444444566665543
No 398
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=96.12 E-value=0.016 Score=60.33 Aligned_cols=113 Identities=12% Similarity=0.154 Sum_probs=77.4
Q ss_pred CCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHH-hhhccccCCCCCCCCCCCCcccccceEE
Q 011641 324 NKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQR-DLTMNKFDWDHPLHLQPMSPTMVKQVSV 402 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (480)
..+|+|+|+. +....++..|.+.|.+|.+||+.....+... .++ ..++..
T Consensus 5 ~~~IgvIG~G----------~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~-------------------~~gi~~ 55 (474)
T 2iz1_A 5 QANFGVVGMA----------VMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQ-------------------DKNLVF 55 (474)
T ss_dssp TBSEEEECCS----------HHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTT-------------------TSCEEE
T ss_pred CCcEEEEeeH----------HHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCc-------------------CCCeEE
Confidence 4589999985 4788999999999999999998643322111 100 024667
Q ss_pred ecCHHhhccc---ccEEEEEecCcc-cccccHHHHHHhcCCCCEEEEcCCCCCh--h----hhhhcCcEEEEec
Q 011641 403 VWDAYEATKD---AHGVCILTEWDE-FKTLDYQRIYDNMQKPAFVFDGRNVVDA--N----KLREIGFIVYSIG 466 (480)
Q Consensus 403 ~~~~~~a~~~---ad~vvi~t~~~~-~~~~~~~~~~~~~~~~~~viD~~~~~~~--~----~~~~~g~~y~~iG 466 (480)
+.++.+++++ +|+|+++++.+. .++ -.+.+...+++..+|||+.+.... . .+.+.|+.|.+.+
T Consensus 56 ~~s~~e~v~~l~~aDvVilavp~~~~v~~-vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~p 128 (474)
T 2iz1_A 56 TKTLEEFVGSLEKPRRIMLMVQAGAATDA-TIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTG 128 (474)
T ss_dssp CSSHHHHHHTBCSSCEEEECCCTTHHHHH-HHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEEE
T ss_pred eCCHHHHHhhccCCCEEEEEccCchHHHH-HHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECCC
Confidence 7889888776 999999999853 443 234566667665699999988743 1 2223477776544
No 399
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=96.10 E-value=0.02 Score=56.19 Aligned_cols=100 Identities=11% Similarity=0.150 Sum_probs=71.6
Q ss_pred CCeEEEEeeccCCCCCcccCChHHHHHHHHHhCC----CEEEEEcCCCC--hHHHHHhhhccccCCCCCCCCCCCCcccc
Q 011641 324 NKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDK----ARLSIYDPQVT--EDQIQRDLTMNKFDWDHPLHLQPMSPTMV 397 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g----~~V~~~DP~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (480)
..+|+|+|+. ..+..++..|.+.| .+|.+||+... ..+...+
T Consensus 22 ~mkI~iIG~G----------~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~---------------------- 69 (322)
T 2izz_A 22 SMSVGFIGAG----------QLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRK---------------------- 69 (322)
T ss_dssp CCCEEEESCS----------HHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHH----------------------
T ss_pred CCEEEEECCC----------HHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHH----------------------
Confidence 3489999974 48899999999999 79999998754 2111112
Q ss_pred cceEEecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCCCChhhhh
Q 011641 398 KQVSVVWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNVVDANKLR 456 (480)
Q Consensus 398 ~~~~~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~~~~~~~~ 456 (480)
.++....+..++++++|+||++++.....+. .+.+...+++..+|+|..+-++...+.
T Consensus 70 ~G~~~~~~~~e~~~~aDvVilav~~~~~~~v-l~~l~~~l~~~~ivvs~s~gi~~~~l~ 127 (322)
T 2izz_A 70 MGVKLTPHNKETVQHSDVLFLAVKPHIIPFI-LDEIGADIEDRHIVVSCAAGVTISSIE 127 (322)
T ss_dssp HTCEEESCHHHHHHHCSEEEECSCGGGHHHH-HHHHGGGCCTTCEEEECCTTCCHHHHH
T ss_pred cCCEEeCChHHHhccCCEEEEEeCHHHHHHH-HHHHHhhcCCCCEEEEeCCCCCHHHHH
Confidence 2356677888999999999999985544432 234555555556999998877765443
No 400
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=96.10 E-value=0.018 Score=56.04 Aligned_cols=105 Identities=17% Similarity=0.167 Sum_probs=66.6
Q ss_pred cEEEEECC-ChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc--c
Q 011641 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS--E 78 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--~ 78 (480)
++|+|+|+ |.+|..++..+.+. |++ .++++|+.+. +. .+ .++.+..+++++.+ .
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~--g~~-~V~~VnP~~~-----g~-~i--------------~G~~vy~sl~el~~~~~ 70 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLEC--GTK-IVGGVTPGKG-----GQ-NV--------------HGVPVFDTVKEAVKETD 70 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT--TCC-EEEEECTTCT-----TC-EE--------------TTEEEESSHHHHHHHHC
T ss_pred CEEEEECCCCCHHHHHHHHHHhC--CCe-EEEEeCCCCC-----Cc-eE--------------CCEeeeCCHHHHhhcCC
Confidence 36888898 99999999999987 888 6667776421 10 00 14677888888777 8
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhcC
Q 011641 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNS 145 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~~ 145 (480)
+|++++++|.+ ...++++...+. ....+|+..+.++....+++.+..++.+
T Consensus 71 ~Dv~ii~vp~~---------------~~~~~v~ea~~~-Gi~~vVi~t~G~~~~~~~~l~~~A~~~g 121 (294)
T 2yv1_A 71 ANASVIFVPAP---------------FAKDAVFEAIDA-GIELIVVITEHIPVHDTMEFVNYAEDVG 121 (294)
T ss_dssp CCEEEECCCHH---------------HHHHHHHHHHHT-TCSEEEECCSCCCHHHHHHHHHHHHHHT
T ss_pred CCEEEEccCHH---------------HHHHHHHHHHHC-CCCEEEEECCCCCHHHHHHHHHHHHHcC
Confidence 99999998742 234444544442 2233454444444433445666665543
No 401
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=96.07 E-value=0.018 Score=55.15 Aligned_cols=96 Identities=15% Similarity=0.123 Sum_probs=67.9
Q ss_pred CeEEEEeeccCCCCCcccCChHHHHHHHHHhCCC--EEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceEE
Q 011641 325 KKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKA--RLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVSV 402 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~--~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (480)
++|+|+|+.. -+..++..|.+.|. +|.+||+.....+....++ . ....
T Consensus 2 ~~I~iIG~G~----------mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g------------------~--~~~~ 51 (281)
T 2g5c_A 2 QNVLIVGVGF----------MGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLG------------------I--IDEG 51 (281)
T ss_dssp CEEEEESCSH----------HHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTT------------------S--CSEE
T ss_pred cEEEEEecCH----------HHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCC------------------C--cccc
Confidence 4799999754 77899999999998 9999999654332222211 0 0023
Q ss_pred ecCHHhhcc-cccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCCCC
Q 011641 403 VWDAYEATK-DAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNVVD 451 (480)
Q Consensus 403 ~~~~~~a~~-~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~~~ 451 (480)
..++.++++ ++|+|+++++.+...++ ..++...+++..+|+|..+.-.
T Consensus 52 ~~~~~~~~~~~aDvVilavp~~~~~~v-~~~l~~~l~~~~iv~~~~~~~~ 100 (281)
T 2g5c_A 52 TTSIAKVEDFSPDFVMLSSPVRTFREI-AKKLSYILSEDATVTDQGSVKG 100 (281)
T ss_dssp ESCGGGGGGTCCSEEEECSCHHHHHHH-HHHHHHHSCTTCEEEECCSCCT
T ss_pred cCCHHHHhcCCCCEEEEcCCHHHHHHH-HHHHHhhCCCCcEEEECCCCcH
Confidence 457788899 99999999988765542 3456666776679999887654
No 402
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=96.07 E-value=0.014 Score=56.37 Aligned_cols=109 Identities=11% Similarity=0.086 Sum_probs=73.4
Q ss_pred CCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceEEe
Q 011641 324 NKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVSVV 403 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (480)
..||+|+|+.. -+..++..|.+.|.+|.+||+.....+ .+. ..++...
T Consensus 4 ~~~i~iiG~G~----------~G~~~a~~l~~~g~~V~~~~~~~~~~~---~~~-------------------~~g~~~~ 51 (301)
T 3cky_A 4 SIKIGFIGLGA----------MGKPMAINLLKEGVTVYAFDLMEANVA---AVV-------------------AQGAQAC 51 (301)
T ss_dssp CCEEEEECCCT----------THHHHHHHHHHTTCEEEEECSSHHHHH---HHH-------------------TTTCEEC
T ss_pred CCEEEEECccH----------HHHHHHHHHHHCCCeEEEEeCCHHHHH---HHH-------------------HCCCeec
Confidence 35899999754 778899999999999999998543221 111 0135566
Q ss_pred cCHHhhcccccEEEEEecCcc-cccccH--HHHHHhcCCCCEEEEcCCCCC--hhhh----hhcCcEEEE
Q 011641 404 WDAYEATKDAHGVCILTEWDE-FKTLDY--QRIYDNMQKPAFVFDGRNVVD--ANKL----REIGFIVYS 464 (480)
Q Consensus 404 ~~~~~a~~~ad~vvi~t~~~~-~~~~~~--~~~~~~~~~~~~viD~~~~~~--~~~~----~~~g~~y~~ 464 (480)
.++.++++++|+|+++++.+. .+..-. +.+...+++..+|+|..+... ...+ .+.|+.|..
T Consensus 52 ~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~~ 121 (301)
T 3cky_A 52 ENNQKVAAASDIIFTSLPNAGIVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVD 121 (301)
T ss_dssp SSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHhCCCEEEEECCCHHHHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 788999999999999996654 332211 145556666669999988872 2222 234677754
No 403
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=96.04 E-value=0.015 Score=56.09 Aligned_cols=33 Identities=18% Similarity=0.407 Sum_probs=30.9
Q ss_pred cEEEEECC-ChhHHHHHHHHHHcCCCCeEEEEECCH
Q 011641 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISV 36 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~ 36 (480)
|||.|.|+ |++|..++..|.++ ||+|+++.|++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~--G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNAR--GHEVTLVSRKP 34 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCC
Confidence 89999996 99999999999998 99999999864
No 404
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=96.03 E-value=0.0045 Score=62.04 Aligned_cols=32 Identities=25% Similarity=0.620 Sum_probs=26.9
Q ss_pred cEEEEEC-CChhHHHHHHHHHHcCCCCeEEEEEC
Q 011641 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDI 34 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~ 34 (480)
+||+|+| .|++|..+...|.++ +..+++.+..
T Consensus 17 ~kV~IiGAtG~iG~~llr~L~~~-p~~elvai~~ 49 (359)
T 1xyg_A 17 IRIGLLGASGYTGAEIVRLLANH-PHFQVTLMTA 49 (359)
T ss_dssp EEEEEECCSSHHHHHHHHHHHTC-SSEEEEEEBC
T ss_pred cEEEEECcCCHHHHHHHHHHHcC-CCcEEEEEeC
Confidence 5899999 899999999999986 4568777654
No 405
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.99 E-value=0.0025 Score=61.12 Aligned_cols=36 Identities=22% Similarity=0.208 Sum_probs=32.9
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHH
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSR 38 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~ 38 (480)
||||.|.|+|++|..++..|.++ |++|++++++++.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~--g~~V~~~~r~~~~ 38 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQ--GHEVTGLRRSAQP 38 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT--TCCEEEEECTTSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCccc
Confidence 47899999999999999999998 9999999998654
No 406
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=95.99 E-value=0.0037 Score=59.75 Aligned_cols=74 Identities=14% Similarity=0.251 Sum_probs=49.6
Q ss_pred cEEEEECC-ChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
|+|.|.|. |.+|..++..|++..+|++|+++++++++.+.+......+.. +.+.-..++.++++++|
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~------------~D~~d~~~l~~~~~~~d 68 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRH------------GDYNQPESLQKAFAGVS 68 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEE------------CCTTCHHHHHHHTTTCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEE------------eccCCHHHHHHHHhcCC
Confidence 68999996 999999999998753479999999988766555432111110 11110123445677899
Q ss_pred EEEEecc
Q 011641 81 IVFVSVN 87 (480)
Q Consensus 81 vVii~Vp 87 (480)
+||-+..
T Consensus 69 ~vi~~a~ 75 (287)
T 2jl1_A 69 KLLFISG 75 (287)
T ss_dssp EEEECCC
T ss_pred EEEEcCC
Confidence 9998865
No 407
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=95.99 E-value=0.0074 Score=59.04 Aligned_cols=40 Identities=18% Similarity=0.238 Sum_probs=35.4
Q ss_pred cEEEEECC-ChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHH
Q 011641 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWN 43 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~ 43 (480)
|+|.|.|. |.+|..++..|+++ |++|++++++++..+.+.
T Consensus 12 ~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~ 52 (342)
T 1y1p_A 12 SLVLVTGANGFVASHVVEQLLEH--GYKVRGTARSASKLANLQ 52 (342)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCcccHHHHH
Confidence 68999996 99999999999998 999999999988765543
No 408
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=95.98 E-value=0.057 Score=55.13 Aligned_cols=103 Identities=15% Similarity=0.092 Sum_probs=70.9
Q ss_pred HHHHHHHHhcCcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCC
Q 011641 310 FVNRVVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHL 389 (480)
Q Consensus 310 ~~~~~~~~l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~ 389 (480)
++.-+.+..+..+.+++|+|+|.. .-...+++.|...|++|.+||+.-........
T Consensus 233 lvdgI~Ratg~~L~GKTVgVIG~G----------~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~-------------- 288 (464)
T 3n58_A 233 LVDGIRRGTDVMMAGKVAVVCGYG----------DVGKGSAQSLAGAGARVKVTEVDPICALQAAM-------------- 288 (464)
T ss_dssp HHHHHHHHHCCCCTTCEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSSHHHHHHHHH--------------
T ss_pred HHHHHHHhcCCcccCCEEEEECcC----------HHHHHHHHHHHHCCCEEEEEeCCcchhhHHHh--------------
Confidence 334444555567899999999974 36789999999999999999763221111111
Q ss_pred CCCCcccccceEEecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCC
Q 011641 390 QPMSPTMVKQVSVVWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRN 448 (480)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~ 448 (480)
.++.+ .+++++++.+|+|+..|..... ++- +..+.|++.++|+++-+
T Consensus 289 --------~G~~v-v~LeElL~~ADIVv~atgt~~l--I~~-e~l~~MK~GAILINvGR 335 (464)
T 3n58_A 289 --------DGFEV-VTLDDAASTADIVVTTTGNKDV--ITI-DHMRKMKDMCIVGNIGH 335 (464)
T ss_dssp --------TTCEE-CCHHHHGGGCSEEEECCSSSSS--BCH-HHHHHSCTTEEEEECSS
T ss_pred --------cCcee-ccHHHHHhhCCEEEECCCCccc--cCH-HHHhcCCCCeEEEEcCC
Confidence 12333 3789999999999998765432 344 44578888888998765
No 409
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=95.98 E-value=0.0059 Score=58.97 Aligned_cols=73 Identities=16% Similarity=0.176 Sum_probs=48.7
Q ss_pred CcEEEEECC-ChhHHHHHHHHHHcCCCCeEEEEECC------HHHHHHH---HcCCCCCcCCChHHHHhhhcCCCEEEec
Q 011641 1 MVKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDIS------VSRINAW---NSDQLPIYEPGLDGVVKQCRGKNLFFST 70 (480)
Q Consensus 1 ~mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~------~~~v~~l---~~~~~~~~e~~l~~~~~~~~~~~l~~t~ 70 (480)
||+|.|.|. |.+|..++..|++. |++|++++|+ +++.+.+ ......+.. +.+.-..
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~------------~D~~d~~ 69 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDL--GHPTFLLVRESTASSNSEKAQLLESFKASGANIVH------------GSIDDHA 69 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEEC------------CCTTCHH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC--CCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEE------------eccCCHH
Confidence 478999996 99999999999998 8999999997 4444332 222111111 1111112
Q ss_pred CHHHhhccCcEEEEecc
Q 011641 71 DVEKHVSEADIVFVSVN 87 (480)
Q Consensus 71 d~~~a~~~aDvVii~Vp 87 (480)
++.++++++|+||.|.+
T Consensus 70 ~l~~~~~~~d~vi~~a~ 86 (308)
T 1qyc_A 70 SLVEAVKNVDVVISTVG 86 (308)
T ss_dssp HHHHHHHTCSEEEECCC
T ss_pred HHHHHHcCCCEEEECCc
Confidence 34556788999999865
No 410
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=95.97 E-value=0.025 Score=57.94 Aligned_cols=106 Identities=12% Similarity=0.071 Sum_probs=70.4
Q ss_pred CCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCccc------
Q 011641 323 SNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTM------ 396 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 396 (480)
+-.||+|+|+.| -.+.++..|.+ |.+|.+||..-..-+.... ...|+. + ++.
T Consensus 35 ~~mkIaVIGlG~----------mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~-------g~~~i~--e--~~l~~ll~~ 92 (432)
T 3pid_A 35 EFMKITISGTGY----------VGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQ-------KISPIV--D--KEIQEYLAE 92 (432)
T ss_dssp CCCEEEEECCSH----------HHHHHHHHHHT-TSEEEEECSCHHHHHHHHT-------TCCSSC--C--HHHHHHHHH
T ss_pred CCCEEEEECcCH----------HHHHHHHHHHc-CCeEEEEecCHHHhhHHhc-------cCCccc--c--ccHHHHHhh
Confidence 456999999987 77899999887 9999999985443222111 000100 0 000
Q ss_pred -ccceEEecCHHhhcccccEEEEEecCccc---cccc-------HHHHHHhcCCCCEEEEcCCCCC
Q 011641 397 -VKQVSVVWDAYEATKDAHGVCILTEWDEF---KTLD-------YQRIYDNMQKPAFVFDGRNVVD 451 (480)
Q Consensus 397 -~~~~~~~~~~~~a~~~ad~vvi~t~~~~~---~~~~-------~~~~~~~~~~~~~viD~~~~~~ 451 (480)
..++++++++.+++++||+|+++++-+.= ..+| .+.+.. +++..+|||...+..
T Consensus 93 ~~~~l~~ttd~~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~p 157 (432)
T 3pid_A 93 KPLNFRATTDKHDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPV 157 (432)
T ss_dssp SCCCEEEESCHHHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCT
T ss_pred ccCCeEEEcCHHHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCCh
Confidence 12578889999999999999999887621 0122 245666 677779999876664
No 411
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=95.96 E-value=0.025 Score=58.89 Aligned_cols=114 Identities=12% Similarity=0.164 Sum_probs=77.8
Q ss_pred CeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceEEec
Q 011641 325 KKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVSVVW 404 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (480)
.+|+|+|++. ....++..|.++|.+|.+||......+....- .. ++ .++..+.
T Consensus 3 m~IgvIG~G~----------mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~-------~~--------~g--~gi~~~~ 55 (482)
T 2pgd_A 3 ADIALIGLAV----------MGQNLILNMNDHGFVVCAFNRTVSKVDDFLAN-------EA--------KG--TKVLGAH 55 (482)
T ss_dssp BSEEEECCSH----------HHHHHHHHHHHTTCCEEEECSSTHHHHHHHHT-------TT--------TT--SSCEECS
T ss_pred CeEEEEChHH----------HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhc-------cc--------cC--CCeEEeC
Confidence 4799999854 78899999999999999999865432211110 00 00 2456677
Q ss_pred CHHhhcc---cccEEEEEecCc-ccccccHHHHHHhcCCCCEEEEcCCCCChh------hhhhcCcEEEEec
Q 011641 405 DAYEATK---DAHGVCILTEWD-EFKTLDYQRIYDNMQKPAFVFDGRNVVDAN------KLREIGFIVYSIG 466 (480)
Q Consensus 405 ~~~~a~~---~ad~vvi~t~~~-~~~~~~~~~~~~~~~~~~~viD~~~~~~~~------~~~~~g~~y~~iG 466 (480)
+++++++ ++|+|+++++.+ ..++ -.+.+...+++..+|||+.+..... .+.+.|+.|.+.+
T Consensus 56 ~~~e~v~~l~~aDvVilaVp~~~~v~~-vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~p 126 (482)
T 2pgd_A 56 SLEEMVSKLKKPRRIILLVKAGQAVDN-FIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSG 126 (482)
T ss_dssp SHHHHHHHBCSSCEEEECSCTTHHHHH-HHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHhhccCCCEEEEeCCChHHHHH-HHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCC
Confidence 8888764 899999999986 4444 2356777777656999998877532 2234577776554
No 412
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=95.95 E-value=0.0086 Score=55.74 Aligned_cols=74 Identities=7% Similarity=0.073 Sum_probs=50.9
Q ss_pred CcEEEEEC-CChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccC
Q 011641 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
+|+|.|.| .|.+|..++..|+++++|++|+++++++++.+.+..+ ..+..-+ +.-..+++++++++
T Consensus 4 ~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~D------------~~d~~~~~~~~~~~ 70 (253)
T 1xq6_A 4 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGE-ADVFIGD------------ITDADSINPAFQGI 70 (253)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCC-TTEEECC------------TTSHHHHHHHHTTC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCC-eeEEEec------------CCCHHHHHHHHcCC
Confidence 47899998 6999999999999873369999999999887665221 1111101 11012344567789
Q ss_pred cEEEEecc
Q 011641 80 DIVFVSVN 87 (480)
Q Consensus 80 DvVii~Vp 87 (480)
|+||-+..
T Consensus 71 d~vi~~a~ 78 (253)
T 1xq6_A 71 DALVILTS 78 (253)
T ss_dssp SEEEECCC
T ss_pred CEEEEecc
Confidence 99998875
No 413
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=95.94 E-value=0.0072 Score=58.50 Aligned_cols=74 Identities=12% Similarity=0.170 Sum_probs=50.2
Q ss_pred CcEEEEEC-CChhHHHHHHHHHHcCCCCeEEEEECC-----HHHHHHHH---cCCCCCcCCChHHHHhhhcCCCEEEecC
Q 011641 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDIS-----VSRINAWN---SDQLPIYEPGLDGVVKQCRGKNLFFSTD 71 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~-----~~~v~~l~---~~~~~~~e~~l~~~~~~~~~~~l~~t~d 71 (480)
||+|.|.| .|.+|..++..|.+. |++|++++|+ +++.+.+. .....+.. +.+.-..+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~------------~D~~d~~~ 69 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISL--GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIE------------ASLDDHQR 69 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEEC------------CCSSCHHH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC--CCcEEEEECCCcccchhHHHHHHHHHhCCeEEEe------------CCCCCHHH
Confidence 47899999 599999999999998 9999999998 55554432 21111111 11111123
Q ss_pred HHHhhccCcEEEEeccC
Q 011641 72 VEKHVSEADIVFVSVNT 88 (480)
Q Consensus 72 ~~~a~~~aDvVii~Vpt 88 (480)
+.++++++|+||.+.+.
T Consensus 70 l~~~~~~~d~vi~~a~~ 86 (313)
T 1qyd_A 70 LVDALKQVDVVISALAG 86 (313)
T ss_dssp HHHHHTTCSEEEECCCC
T ss_pred HHHHHhCCCEEEECCcc
Confidence 45667899999998764
No 414
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=95.93 E-value=0.0072 Score=60.32 Aligned_cols=32 Identities=22% Similarity=0.599 Sum_probs=26.2
Q ss_pred CcEEEEEC-CChhHHHHHHHHHHcCC-----CCeEEEEE
Q 011641 1 MVKICCIG-AGYVGGPTMAVIALKCP-----SIEVAVVD 33 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~-----G~~V~~~D 33 (480)
||||+|+| .|++|..+...|.++ + .++++.+.
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~-~~~~~~~~ei~~l~ 46 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGH-PAYADGRLRIGALT 46 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC-HHHHTTSEEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHcC-CCCCCccEEEEEEE
Confidence 47999999 999999999999986 2 24777664
No 415
>3h2z_A Mannitol-1-phosphate 5-dehydrogenase; PSI- protein structure initiative, structural genomics, midwest for structural genomics (MCSG); 1.90A {Shigella flexneri 2a str}
Probab=95.91 E-value=0.0095 Score=60.06 Aligned_cols=82 Identities=21% Similarity=0.263 Sum_probs=52.7
Q ss_pred cEEEEECCChhHHHH-HHHHHHcCCCCeEEEEECCHHHHHHHHcCC-CCCcCCChHHHHhhhcCCCEEE-ecC---HHHh
Q 011641 2 VKICCIGAGYVGGPT-MAVIALKCPSIEVAVVDISVSRINAWNSDQ-LPIYEPGLDGVVKQCRGKNLFF-STD---VEKH 75 (480)
Q Consensus 2 mkI~VIGlG~~G~~l-A~~La~~~~G~~V~~~D~~~~~v~~l~~~~-~~~~e~~l~~~~~~~~~~~l~~-t~d---~~~a 75 (480)
||+..+|.|++|..+ +..|.+. |++|+..|+|+..+++|++.+ .++..-|.++....+ .++++ .++ .-+.
T Consensus 1 mkavhfGaGniGRGfig~~l~~~--g~~v~f~dv~~~~i~~Ln~~~~Y~V~~~g~~~~~~~v--~~v~ai~s~~~~~~~~ 76 (382)
T 3h2z_A 1 MKALHFGAGNIGRGFIGKLLADA--GIQLTFADVNQVVLDALNARHSYQVHVVGETEQVDTV--SGVNAVSSIGDDVVDL 76 (382)
T ss_dssp CEEEEECCSHHHHHTHHHHHHHT--TCEEEEEESCHHHHHHHHHHSEEEEEEESSSEEEEEE--ESCEEEETTSSHHHHH
T ss_pred CcEEEECCCccchhhHHHHHHHc--CCeEEEEeCCHHHHHHHhcCCCEEEEEccCCcceEEE--EEEEEEeCcHHHHHHH
Confidence 899999999999555 4556666 999999999999999999632 222222221111001 12332 122 3335
Q ss_pred hccCcEEEEecc
Q 011641 76 VSEADIVFVSVN 87 (480)
Q Consensus 76 ~~~aDvVii~Vp 87 (480)
+.++|+|..+++
T Consensus 77 i~~adlitT~vG 88 (382)
T 3h2z_A 77 IAQVDLVTTAVG 88 (382)
T ss_dssp HTTCSEEEECCC
T ss_pred HcCCCEEEECCC
Confidence 679999888876
No 416
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=95.87 E-value=0.003 Score=62.03 Aligned_cols=73 Identities=16% Similarity=0.205 Sum_probs=47.5
Q ss_pred CcEEEEEC-CChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccC
Q 011641 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (480)
+|+|.|.| .|.+|..++..|+++ |++|++++++++..+.+......+.. +.+.-..++.++++++
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~l~~~~~~~~~------------~Dl~d~~~~~~~~~~~ 78 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAA--GHDLVLIHRPSSQIQRLAYLEPECRV------------AEMLDHAGLERALRGL 78 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECTTSCGGGGGGGCCEEEE------------CCTTCHHHHHHHTTTC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEecChHhhhhhccCCeEEEE------------ecCCCHHHHHHHHcCC
Confidence 47999999 599999999999998 99999999987654433321111100 1111011234566789
Q ss_pred cEEEEecc
Q 011641 80 DIVFVSVN 87 (480)
Q Consensus 80 DvVii~Vp 87 (480)
|+||-|..
T Consensus 79 d~vih~a~ 86 (342)
T 2x4g_A 79 DGVIFSAG 86 (342)
T ss_dssp SEEEEC--
T ss_pred CEEEECCc
Confidence 99998865
No 417
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=95.86 E-value=0.0053 Score=59.32 Aligned_cols=74 Identities=15% Similarity=0.130 Sum_probs=50.0
Q ss_pred CcEEEEECC-ChhHHHHHHHHHHcCCCCeEEEEECCH-------HHHHHHH---cCCCCCcCCChHHHHhhhcCCCEEEe
Q 011641 1 MVKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISV-------SRINAWN---SDQLPIYEPGLDGVVKQCRGKNLFFS 69 (480)
Q Consensus 1 ~mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~-------~~v~~l~---~~~~~~~e~~l~~~~~~~~~~~l~~t 69 (480)
||+|.|.|+ |.+|..++..|++. |++|++++|++ ++.+.+. .....+.. +.+.-.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~------------~D~~d~ 67 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKA--GNPTYALVRKTITAANPETKEELIDNYQSLGVILLE------------GDINDH 67 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHH--TCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEE------------CCTTCH
T ss_pred CcEEEEECCCchHHHHHHHHHHhC--CCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEE------------eCCCCH
Confidence 688999996 99999999999998 89999999986 5554332 11111100 011101
Q ss_pred cCHHHhhccCcEEEEeccC
Q 011641 70 TDVEKHVSEADIVFVSVNT 88 (480)
Q Consensus 70 ~d~~~a~~~aDvVii~Vpt 88 (480)
.++.++++++|+||.|.+.
T Consensus 68 ~~l~~~~~~~d~vi~~a~~ 86 (307)
T 2gas_A 68 ETLVKAIKQVDIVICAAGR 86 (307)
T ss_dssp HHHHHHHTTCSEEEECSSS
T ss_pred HHHHHHHhCCCEEEECCcc
Confidence 2345567889999998763
No 418
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=95.86 E-value=0.0029 Score=62.67 Aligned_cols=64 Identities=17% Similarity=0.258 Sum_probs=44.2
Q ss_pred cEEEEECCChhHHHHHHHHHHcCC--------CCeE-EEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCH
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCP--------SIEV-AVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDV 72 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~--------G~~V-~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~ 72 (480)
+||+|||+|.||..++..+.++ + +.+| .++|++.++.+ + ++ ...+++|+
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~-~~~l~~~g~~~~lvaV~d~~~~~~~----~--------~~---------~~~~~~d~ 61 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLER-AEELSAFGVVPRFLGVLVRDPRKPR----A--------IP---------QELLRAEP 61 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-GGGGGGGTEEEEEEEEECSCTTSCC----S--------SC---------GGGEESSC
T ss_pred eEEEEEcCCHHHHHHHHHHHhC-hhhHhhcCCCEEEEEEEECCHHHhh----c--------cC---------cccccCCH
Confidence 6899999999999999999875 2 2454 45677744211 1 10 01246777
Q ss_pred HHhhccCcEEEEeccC
Q 011641 73 EKHVSEADIVFVSVNT 88 (480)
Q Consensus 73 ~~a~~~aDvVii~Vpt 88 (480)
++.+ +.|+|++|+|+
T Consensus 62 ~~ll-~iDvVve~t~~ 76 (332)
T 2ejw_A 62 FDLL-EADLVVEAMGG 76 (332)
T ss_dssp CCCT-TCSEEEECCCC
T ss_pred HHHh-CCCEEEECCCC
Confidence 7767 99999999774
No 419
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.84 E-value=0.03 Score=54.92 Aligned_cols=74 Identities=15% Similarity=0.165 Sum_probs=51.9
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCC-eEEEEECC---HHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEe--cC---H
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDIS---VSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFS--TD---V 72 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~---~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t--~d---~ 72 (480)
.++.|+|+|.+|.+++..|++. |. +|++++|+ .++.+.+.+. +-.. ....+.+. ++ +
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~--Ga~~V~i~nR~~~~~~~a~~la~~-----------~~~~-~~~~~~~~~~~~~~~l 220 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALD--GVKEISIFNRKDDFYANAEKTVEK-----------INSK-TDCKAQLFDIEDHEQL 220 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCSEEEEEECSSTTHHHHHHHHHH-----------HHHH-SSCEEEEEETTCHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHC--CCCEEEEEECCCchHHHHHHHHHH-----------hhhh-cCCceEEeccchHHHH
Confidence 4789999999999999999998 87 89999999 8888776531 0000 00112221 22 3
Q ss_pred HHhhccCcEEEEeccCC
Q 011641 73 EKHVSEADIVFVSVNTP 89 (480)
Q Consensus 73 ~~a~~~aDvVii~Vptp 89 (480)
.+.+.++|+||-|+|..
T Consensus 221 ~~~l~~aDiIINaTp~G 237 (315)
T 3tnl_A 221 RKEIAESVIFTNATGVG 237 (315)
T ss_dssp HHHHHTCSEEEECSSTT
T ss_pred HhhhcCCCEEEECccCC
Confidence 45577999999997753
No 420
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=95.82 E-value=0.0024 Score=63.25 Aligned_cols=68 Identities=15% Similarity=0.094 Sum_probs=49.3
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCc--CCChHHHHhhhcCCCEEEecCHHHh-hcc
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIY--EPGLDGVVKQCRGKNLFFSTDVEKH-VSE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~--e~~l~~~~~~~~~~~l~~t~d~~~a-~~~ 78 (480)
++|.|+|+|.+|..+|..|.+. |+ |+++|+|+++++ +++...++. ++.-++ .++++ +++
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~--g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~--------------~L~~a~i~~ 177 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGS--EV-FVLAEDENVRKK-VLRSGANFVHGDPTRVS--------------DLEKANVRG 177 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGS--CE-EEEESCGGGHHH-HHHTTCEEEESCTTSHH--------------HHHHTCSTT
T ss_pred CCEEEECCcHHHHHHHHHHHhC--Cc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHH--------------HHHhcChhh
Confidence 4799999999999999999988 89 999999999998 765322221 111111 12223 678
Q ss_pred CcEEEEecc
Q 011641 79 ADIVFVSVN 87 (480)
Q Consensus 79 aDvVii~Vp 87 (480)
||.++++++
T Consensus 178 a~~vi~~~~ 186 (336)
T 1lnq_A 178 ARAVIVDLE 186 (336)
T ss_dssp EEEEEECCS
T ss_pred ccEEEEcCC
Confidence 999999965
No 421
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=95.81 E-value=0.018 Score=55.59 Aligned_cols=92 Identities=16% Similarity=0.187 Sum_probs=62.1
Q ss_pred eEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceEEecC
Q 011641 326 KIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVSVVWD 405 (480)
Q Consensus 326 ~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (480)
+|+|+|+.. .+..++..|.+.|.+|.+||+.....+.... .++....+
T Consensus 2 ~i~iiG~G~----------mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~----------------------~g~~~~~~ 49 (296)
T 2gf2_A 2 PVGFIGLGN----------MGNPMAKNLMKHGYPLIIYDVFPDACKEFQD----------------------AGEQVVSS 49 (296)
T ss_dssp CEEEECCST----------THHHHHHHHHHTTCCEEEECSSTHHHHHHHT----------------------TTCEECSS
T ss_pred eEEEEeccH----------HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----------------------cCCeecCC
Confidence 699999754 7789999999999999999986443221111 23566678
Q ss_pred HHhhcccccEEEEEecCcc-cccccHHH---HHHhcCCCCEEEEcCCCC
Q 011641 406 AYEATKDAHGVCILTEWDE-FKTLDYQR---IYDNMQKPAFVFDGRNVV 450 (480)
Q Consensus 406 ~~~a~~~ad~vvi~t~~~~-~~~~~~~~---~~~~~~~~~~viD~~~~~ 450 (480)
+.++++++|+|++++..+. .+.. ... +...+++..+|+|..++-
T Consensus 50 ~~~~~~~~Dvvi~~vp~~~~~~~v-~~~~~~~~~~l~~~~~vv~~s~~~ 97 (296)
T 2gf2_A 50 PADVAEKADRIITMLPTSINAIEA-YSGANGILKKVKKGSLLIDSSTID 97 (296)
T ss_dssp HHHHHHHCSEEEECCSSHHHHHHH-HHSTTSGGGTCCTTCEEEECSCCC
T ss_pred HHHHHhcCCEEEEeCCCHHHHHHH-HhCchhHHhcCCCCCEEEECCCCC
Confidence 8999999999999986543 2221 111 222345556899955443
No 422
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=95.81 E-value=0.01 Score=59.18 Aligned_cols=32 Identities=28% Similarity=0.558 Sum_probs=26.8
Q ss_pred CcEEEEEC-CChhHHHHHHHHHHcCCCCeEEEEE
Q 011641 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVD 33 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D 33 (480)
|+||+|+| .|++|.-+...|.++ +..+++.+.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~-p~~elvai~ 36 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKH-PYLELVKVS 36 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTC-SSEEEEEEE
T ss_pred CcEEEEECcCCHHHHHHHHHHHhC-CCcEEEEEe
Confidence 36899999 899999999998876 567887774
No 423
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=95.79 E-value=0.006 Score=59.44 Aligned_cols=73 Identities=21% Similarity=0.209 Sum_probs=48.9
Q ss_pred CcEEEEECC-ChhHHHHHHHHHHcCCCCeEEEEECCH------HHHHHHH---cCCCCCcCCChHHHHhhhcCCCEEEec
Q 011641 1 MVKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISV------SRINAWN---SDQLPIYEPGLDGVVKQCRGKNLFFST 70 (480)
Q Consensus 1 ~mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~------~~v~~l~---~~~~~~~e~~l~~~~~~~~~~~l~~t~ 70 (480)
||+|.|.|. |.+|..++..|++. |++|++++|++ ++.+.+. .....+.. +.+.-..
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~------------~D~~d~~ 69 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSF--SHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIE------------GEMEEHE 69 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHT--TCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEE------------CCTTCHH
T ss_pred ccEEEEEcCCchhHHHHHHHHHhC--CCcEEEEECCcccccChHHHHHHHHhhcCCcEEEE------------ecCCCHH
Confidence 678999995 99999999999998 99999999985 3433332 11111110 1111012
Q ss_pred CHHHhhccCcEEEEecc
Q 011641 71 DVEKHVSEADIVFVSVN 87 (480)
Q Consensus 71 d~~~a~~~aDvVii~Vp 87 (480)
++.++++++|+||.|.+
T Consensus 70 ~l~~a~~~~d~vi~~a~ 86 (321)
T 3c1o_A 70 KMVSVLKQVDIVISALP 86 (321)
T ss_dssp HHHHHHTTCSEEEECCC
T ss_pred HHHHHHcCCCEEEECCC
Confidence 34556789999999865
No 424
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=95.77 E-value=0.036 Score=56.89 Aligned_cols=108 Identities=16% Similarity=0.099 Sum_probs=68.9
Q ss_pred eEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCccc------ccc
Q 011641 326 KIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTM------VKQ 399 (480)
Q Consensus 326 ~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 399 (480)
||+|+|+.| -...++..|.+.|.+|.++|......+.... ..-|+.. +..... ...
T Consensus 2 kI~VIG~G~----------vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~-------~~~~i~e-~~l~~~~~~~~~~g~ 63 (436)
T 1mv8_A 2 RISIFGLGY----------VGAVCAGCLSARGHEVIGVDVSSTKIDLINQ-------GKSPIVE-PGLEALLQQGRQTGR 63 (436)
T ss_dssp EEEEECCST----------THHHHHHHHHHTTCEEEEECSCHHHHHHHHT-------TCCSSCC-TTHHHHHHHHHHTTC
T ss_pred EEEEECCCH----------HHHHHHHHHHHCCCEEEEEECCHHHHHHHhC-------CCCCcCC-CCHHHHHHhhcccCc
Confidence 799999987 7799999999999999999975433221111 0011100 000000 123
Q ss_pred eEEecCHHhhcccccEEEEEecCcc--ccccc-------HHHHHHhcCC---CCEEEEcCCCCC
Q 011641 400 VSVVWDAYEATKDAHGVCILTEWDE--FKTLD-------YQRIYDNMQK---PAFVFDGRNVVD 451 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~~~~--~~~~~-------~~~~~~~~~~---~~~viD~~~~~~ 451 (480)
+...+++.++++++|+|+++++-+. ....| .+.+...+++ ..+|++...+..
T Consensus 64 l~~t~~~~~~~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~ 127 (436)
T 1mv8_A 64 LSGTTDFKKAVLDSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLP 127 (436)
T ss_dssp EEEESCHHHHHHTCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCT
T ss_pred eEEeCCHHHHhccCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCC
Confidence 7778899999999999999997654 12222 2455556665 568999866553
No 425
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=95.77 E-value=0.031 Score=54.35 Aligned_cols=104 Identities=13% Similarity=0.150 Sum_probs=65.4
Q ss_pred cEEEEECC-ChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc--c
Q 011641 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS--E 78 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--~ 78 (480)
++|.|+|+ |.+|..++..+.+. |++ .++.+|+.+. +. .+ .++.+..+++++.+ .
T Consensus 14 ~~vvV~Gasg~~G~~~~~~l~~~--g~~-~v~~VnP~~~-----g~-~i--------------~G~~vy~sl~el~~~~~ 70 (297)
T 2yv2_A 14 TRVLVQGITGREGSFHAKAMLEY--GTK-VVAGVTPGKG-----GS-EV--------------HGVPVYDSVKEALAEHP 70 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--TCE-EEEEECTTCT-----TC-EE--------------TTEEEESSHHHHHHHCT
T ss_pred CEEEEECCCCCHHHHHHHHHHhC--CCc-EEEEeCCCCC-----Cc-eE--------------CCEeeeCCHHHHhhcCC
Confidence 46888898 99999999999987 888 5666665421 10 00 14677888888665 4
Q ss_pred -CcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 79 -ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 79 -aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
+|++++++|.+. ..++++...+. .-..+|+..+.++....+++.+..++.
T Consensus 71 ~~DvaIi~vp~~~---------------~~~~v~ea~~~-Gi~~vVi~t~G~~~~~~~~l~~~A~~~ 121 (297)
T 2yv2_A 71 EINTSIVFVPAPF---------------APDAVYEAVDA-GIRLVVVITEGIPVHDTMRFVNYARQK 121 (297)
T ss_dssp TCCEEEECCCGGG---------------HHHHHHHHHHT-TCSEEEECCCCCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCHHH---------------HHHHHHHHHHC-CCCEEEEECCCCCHHHHHHHHHHHHHc
Confidence 999999988432 24444544442 223355544445443344566666554
No 426
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=95.76 E-value=0.029 Score=53.77 Aligned_cols=74 Identities=19% Similarity=0.345 Sum_probs=0.0
Q ss_pred cEEEEECCChh-HHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCc
Q 011641 2 VKICCIGAGYV-GGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (480)
Q Consensus 2 mkI~VIGlG~~-G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (480)
.++.|||.|.+ |.++|..|...+.|..|+++++. +.++.+.++.||
T Consensus 159 k~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~---------------------------------t~~L~~~~~~AD 205 (281)
T 2c2x_A 159 AHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTG---------------------------------TRDLPALTRQAD 205 (281)
T ss_dssp CEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTT---------------------------------CSCHHHHHTTCS
T ss_pred CEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECc---------------------------------hhHHHHHHhhCC
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecC
Q 011641 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST 128 (480)
Q Consensus 81 vVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST 128 (480)
+||.+++.|.--.. ..++++.+||+.+.
T Consensus 206 IVI~Avg~p~~I~~--------------------~~vk~GavVIDVgi 233 (281)
T 2c2x_A 206 IVVAAVGVAHLLTA--------------------DMVRPGAAVIDVGV 233 (281)
T ss_dssp EEEECSCCTTCBCG--------------------GGSCTTCEEEECCE
T ss_pred EEEECCCCCcccCH--------------------HHcCCCcEEEEccC
No 427
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=95.76 E-value=0.091 Score=55.22 Aligned_cols=114 Identities=11% Similarity=0.036 Sum_probs=68.0
Q ss_pred cEEEEECCChhHHH-HHHHHHHcCCCCeEEEEECCH--HHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhcc
Q 011641 2 VKICCIGAGYVGGP-TMAVIALKCPSIEVAVVDISV--SRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE 78 (480)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~La~~~~G~~V~~~D~~~--~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (480)
++|-|||.|-.|.+ +|..|.++ |++|+++|.+. ...+.|.+...+ +..-.+.+....+
T Consensus 20 ~~i~~iGiGg~Gms~lA~~l~~~--G~~V~~sD~~~~~~~~~~L~~~gi~-----------------~~~G~~~~~~~~~ 80 (524)
T 3hn7_A 20 MHIHILGICGTFMGSLALLARAL--GHTVTGSDANIYPPMSTQLEQAGVT-----------------IEEGYLIAHLQPA 80 (524)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCCTTHHHHHHHTTCE-----------------EEESCCGGGGCSC
T ss_pred CEEEEEEecHhhHHHHHHHHHhC--CCEEEEECCCCCcHHHHHHHHCCCE-----------------EECCCCHHHcCCC
Confidence 78999999999997 67777877 99999999863 334445432211 1122333442357
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCChHHHHHHHH---------H-HHhhC-CCCcEEEEecCCCcchHHH-HHHHHHhcC
Q 011641 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAAR---------V-IADVS-KSDKIVVEKSTVPVKTAEA-IEKILTHNS 145 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~---------~-i~~~l-~~~~iVi~~STv~~gt~~~-l~~~l~~~~ 145 (480)
+|+||++-.-|. |...+..+.+ + +...+ +...+|.+..|..-.||.. +..+|++.+
T Consensus 81 ~d~vV~Spgi~~-----------~~p~l~~a~~~gi~v~~~~e~l~~~~~~~~~vIaVTGTnGKTTTt~li~~iL~~~G 148 (524)
T 3hn7_A 81 PDLVVVGNAMKR-----------GMDVIEYMLDTGLRYTSGPQFLSEQVLQSRHVIAVAGTHGKTTTTTMLAWILHYAG 148 (524)
T ss_dssp CSEEEECTTCCT-----------TSHHHHHHHHHTCCEEEHHHHHHHHTGGGSEEEEEECSSCHHHHHHHHHHHHHHTT
T ss_pred CCEEEECCCcCC-----------CCHHHHHHHHCCCcEEEHHHHHHHHHhccCcEEEEECCCCHHHHHHHHHHHHHHcC
Confidence 899987733222 2222333322 1 23322 3346777777876666655 567777653
No 428
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=95.71 E-value=0.0045 Score=62.02 Aligned_cols=31 Identities=26% Similarity=0.424 Sum_probs=26.0
Q ss_pred cEEEEEC-CChhHHHHHHHHHHcCCCCeEEEEE
Q 011641 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVD 33 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D 33 (480)
+||+||| .||+|.-+...|.++ |..++..+.
T Consensus 8 ~kVaIvGATGyvG~eLlrlL~~h-P~~el~~l~ 39 (359)
T 4dpk_A 8 LKAAILGATGLVGIEYVRMLSNH-PYIKPAYLA 39 (359)
T ss_dssp EEEEETTTTSTTHHHHHHHHTTC-SSEEEEEEE
T ss_pred CeEEEECCCCHHHHHHHHHHHhC-CCceEEEEE
Confidence 4799999 699999999988876 667877664
No 429
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=95.71 E-value=0.0045 Score=62.02 Aligned_cols=31 Identities=26% Similarity=0.424 Sum_probs=26.0
Q ss_pred cEEEEEC-CChhHHHHHHHHHHcCCCCeEEEEE
Q 011641 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVD 33 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D 33 (480)
+||+||| .||+|.-+...|.++ |..++..+.
T Consensus 8 ~kVaIvGATGyvG~eLlrlL~~h-P~~el~~l~ 39 (359)
T 4dpl_A 8 LKAAILGATGLVGIEYVRMLSNH-PYIKPAYLA 39 (359)
T ss_dssp EEEEETTTTSTTHHHHHHHHTTC-SSEEEEEEE
T ss_pred CeEEEECCCCHHHHHHHHHHHhC-CCceEEEEE
Confidence 4799999 699999999988876 667877664
No 430
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=95.69 E-value=0.0059 Score=60.60 Aligned_cols=33 Identities=21% Similarity=0.391 Sum_probs=26.6
Q ss_pred CcEEEEEC-CChhHHHHHHHHHHcC-CCCeEEEEE
Q 011641 1 MVKICCIG-AGYVGGPTMAVIALKC-PSIEVAVVD 33 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~-~G~~V~~~D 33 (480)
||||+|+| .|++|.-+...|.++. +.++++.+.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~ 37 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLA 37 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEE
Confidence 58999999 9999999999888752 345676665
No 431
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.66 E-value=0.036 Score=55.35 Aligned_cols=110 Identities=11% Similarity=0.068 Sum_probs=73.8
Q ss_pred CCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceEEe
Q 011641 324 NKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVSVV 403 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (480)
..||+|+|.. +-...++..|.+.|.+|.+||..-...+.....+....| +| .. ...+++...
T Consensus 29 ~mkI~VIGaG----------~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~----l~---g~-~l~~~i~~t 90 (356)
T 3k96_A 29 KHPIAILGAG----------SWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRY----LP---NY-PFPETLKAY 90 (356)
T ss_dssp CSCEEEECCS----------HHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTT----BT---TC-CCCTTEEEE
T ss_pred CCeEEEECcc----------HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCccc----CC---CC-ccCCCeEEE
Confidence 4689999974 478899999999999999999853322211111100000 00 00 123457788
Q ss_pred cCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCCCCh
Q 011641 404 WDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNVVDA 452 (480)
Q Consensus 404 ~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~~~~ 452 (480)
+++.++++++|.|+++++....++ -.+++...+++..+|++..+=+.+
T Consensus 91 ~d~~ea~~~aDvVilaVp~~~~~~-vl~~i~~~l~~~~ivvs~~kGi~~ 138 (356)
T 3k96_A 91 CDLKASLEGVTDILIVVPSFAFHE-VITRMKPLIDAKTRIAWGTKGLAK 138 (356)
T ss_dssp SCHHHHHTTCCEEEECCCHHHHHH-HHHHHGGGCCTTCEEEECCCSCBT
T ss_pred CCHHHHHhcCCEEEECCCHHHHHH-HHHHHHHhcCCCCEEEEEeCCCCc
Confidence 899999999999999998875554 235666666666689998775544
No 432
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=95.56 E-value=0.09 Score=54.76 Aligned_cols=117 Identities=18% Similarity=0.224 Sum_probs=67.7
Q ss_pred CcEEEEECCChhHHH-HHHHHHHcCCCCeEEEEECCHHH-HHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhcc
Q 011641 1 MVKICCIGAGYVGGP-TMAVIALKCPSIEVAVVDISVSR-INAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE 78 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~-lA~~La~~~~G~~V~~~D~~~~~-v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (480)
++||.|||+|..|.+ +|..|.+. |++|+++|..... .+.|.+....+ ..-.+.+ .+++
T Consensus 19 ~~~v~viGiG~sG~s~~A~~l~~~--G~~V~~~D~~~~~~~~~l~~~gi~~-----------------~~g~~~~-~~~~ 78 (491)
T 2f00_A 19 VRHIHFVGIGGAGMGGIAEVLANE--GYQISGSDLAPNPVTQQLMNLGATI-----------------YFNHRPE-NVRD 78 (491)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHT--TCEEEEECSSCCHHHHHHHHTTCEE-----------------ESSCCGG-GGTT
T ss_pred CCEEEEEEcCHHHHHHHHHHHHhC--CCeEEEECCCCCHHHHHHHHCCCEE-----------------ECCCCHH-HcCC
Confidence 368999999999997 89999888 9999999986532 23343321111 1011222 3578
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCChHH-------HHHHHHHHHhhCCCCcEEEEecCCCcchHHH-HHHHHHhcC
Q 011641 79 ADIVFVSVNTPTKTQGLGAGKAADLTY-------WESAARVIADVSKSDKIVVEKSTVPVKTAEA-IEKILTHNS 145 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~-------v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~-l~~~l~~~~ 145 (480)
+|+||+.-.-|.+ .+.+.. +....+.+...++...+|-+..|..-+||.. +..+|++.+
T Consensus 79 a~~vv~s~~i~~~--------~p~~~~a~~~~ipvl~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G 145 (491)
T 2f00_A 79 ASVVVVSSAISAD--------NPEIVAAHEARIPVIRRAEMLAELMRFRHGIAIAGTHGKTTTTAMVSSIYAEAG 145 (491)
T ss_dssp CSEEEECTTCCTT--------CHHHHHHHHTTCCEEEHHHHHHHHHTTSEEEEEESSSCHHHHHHHHHHHHHHTT
T ss_pred CCEEEECCCCCCC--------CHHHHHHHHcCCcEEEHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHHHHhCC
Confidence 8988876332211 010000 0011122333344346777778887777665 577887643
No 433
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=95.56 E-value=0.026 Score=56.13 Aligned_cols=32 Identities=16% Similarity=0.221 Sum_probs=26.6
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEE
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVD 33 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D 33 (480)
|+||||+|.|++|.-+...|.++ |.++|..+.
T Consensus 17 ~ikVgI~G~G~iGr~llR~l~~~-p~veivain 48 (354)
T 3cps_A 17 QGTLGINGFGRIGRLVLRACMER-NDITVVAIN 48 (354)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTC-SSCEEEEEE
T ss_pred ceEEEEECCCHHHHHHHHHHHcC-CCeEEEEec
Confidence 46999999999999999998875 578877664
No 434
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=95.55 E-value=0.028 Score=55.54 Aligned_cols=42 Identities=26% Similarity=0.377 Sum_probs=31.3
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEE-EC-CHHHHHHHH
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVV-DI-SVSRINAWN 43 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~-D~-~~~~v~~l~ 43 (480)
|+||||+|.|++|.-+...|.++ +..+|.++ |. +++....+-
T Consensus 1 mikVgI~G~G~iGr~l~R~l~~~-~~veivain~~~~~~~~~~ll 44 (334)
T 3cmc_O 1 AVKVGINGFGRIGRNVFRAALKN-PDIEVVAVNDLTDANTLAHLL 44 (334)
T ss_dssp CEEEEEESCSHHHHHHHHHHTTC-TTEEEEEEECSSCHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHhCC-CCeEEEEEeCCCCHHHHHHHh
Confidence 78999999999999999988875 56777655 43 444544443
No 435
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=95.55 E-value=0.024 Score=54.29 Aligned_cols=90 Identities=10% Similarity=0.099 Sum_probs=63.3
Q ss_pred eEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceEEecC
Q 011641 326 KIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVSVVWD 405 (480)
Q Consensus 326 ~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (480)
+|+|+|+. .-+..++..|.+ |.+|.+||+.....+..... ++...+
T Consensus 3 ~i~iiG~G----------~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~----------------------g~~~~~- 48 (289)
T 2cvz_A 3 KVAFIGLG----------AMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEE----------------------FGSEAV- 48 (289)
T ss_dssp CEEEECCS----------TTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHH----------------------HCCEEC-
T ss_pred eEEEEccc----------HHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHC----------------------CCcccC-
Confidence 79999974 477889999999 99999999865432222111 123334
Q ss_pred HHhhcccccEEEEEecCcc-cccccHHHHHHhcCCCCEEEEcCCCC
Q 011641 406 AYEATKDAHGVCILTEWDE-FKTLDYQRIYDNMQKPAFVFDGRNVV 450 (480)
Q Consensus 406 ~~~a~~~ad~vvi~t~~~~-~~~~~~~~~~~~~~~~~~viD~~~~~ 450 (480)
+.++++++|+|+++++.+. .+. -.+.+...+++..+|+|..+..
T Consensus 49 ~~~~~~~~D~vi~~v~~~~~~~~-v~~~l~~~l~~~~~vv~~s~~~ 93 (289)
T 2cvz_A 49 PLERVAEARVIFTCLPTTREVYE-VAEALYPYLREGTYWVDATSGE 93 (289)
T ss_dssp CGGGGGGCSEEEECCSSHHHHHH-HHHHHTTTCCTTEEEEECSCCC
T ss_pred HHHHHhCCCEEEEeCCChHHHHH-HHHHHHhhCCCCCEEEECCCCC
Confidence 6778899999999999875 443 1245555566566899998765
No 436
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=95.54 E-value=0.13 Score=51.70 Aligned_cols=129 Identities=15% Similarity=0.041 Sum_probs=75.2
Q ss_pred CCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCC--------CCCCCCC
Q 011641 322 VSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHP--------LHLQPMS 393 (480)
Q Consensus 322 ~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ 393 (480)
+.+.||+|+|.. .-.+..++.|...|++|.+||+.....+...+++ ..+..- ...++++
T Consensus 182 v~~~kV~ViG~G----------~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lG---a~~~~l~~~~~~~~gya~~~~ 248 (381)
T 3p2y_A 182 VKPASALVLGVG----------VAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVG---AQWLDLGIDAAGEGGYARELS 248 (381)
T ss_dssp ECCCEEEEESCS----------HHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTT---CEECCCC-------------C
T ss_pred cCCCEEEEECch----------HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC---CeEEeccccccccccchhhhh
Confidence 477899999974 4778899999999999999999876543333332 111000 0000000
Q ss_pred cccccceEEecCHHhhcccccEEEEEecCccc--ccccHHHHHHhcCCCCEEEEcC----CCCCh----hhhhhcCcEEE
Q 011641 394 PTMVKQVSVVWDAYEATKDAHGVCILTEWDEF--KTLDYQRIYDNMQKPAFVFDGR----NVVDA----NKLREIGFIVY 463 (480)
Q Consensus 394 ~~~~~~~~~~~~~~~a~~~ad~vvi~t~~~~~--~~~~~~~~~~~~~~~~~viD~~----~~~~~----~~~~~~g~~y~ 463 (480)
... ......++.++++++|+||..+..|.= ..+=-++..+.|++..+|||.- +.++- ......|+.++
T Consensus 249 ~~~--~~~~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e~t~~~~~~~~~gV~~~ 326 (381)
T 3p2y_A 249 EAE--RAQQQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNCELTEPGRTIVHHGVTIT 326 (381)
T ss_dssp HHH--HHHHHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTCEEEETTEEEE
T ss_pred HHH--HhhhHHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCccccccCCCeEEECCEEEE
Confidence 000 000123577889999999976544421 1112256778899888999985 34431 11223566665
Q ss_pred Ee
Q 011641 464 SI 465 (480)
Q Consensus 464 ~i 465 (480)
++
T Consensus 327 ~v 328 (381)
T 3p2y_A 327 SP 328 (381)
T ss_dssp CC
T ss_pred ee
Confidence 55
No 437
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=95.54 E-value=0.021 Score=55.80 Aligned_cols=94 Identities=13% Similarity=0.124 Sum_probs=65.3
Q ss_pred CCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceEEe
Q 011641 324 NKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVSVV 403 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (480)
..+|+|+|+.. -+..++..|.+.|.+|.+||+.....+...+ .++...
T Consensus 30 ~~~I~iIG~G~----------mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~----------------------~g~~~~ 77 (316)
T 2uyy_A 30 DKKIGFLGLGL----------MGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQ----------------------EGARLG 77 (316)
T ss_dssp SSCEEEECCSH----------HHHHHHHHHHHTTCCEEEECSSGGGGHHHHH----------------------TTCEEC
T ss_pred CCeEEEEcccH----------HHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH----------------------cCCEEc
Confidence 36899999754 7789999999999999999986543222211 124556
Q ss_pred cCHHhhcccccEEEEEecCcc-cccccHHH---HHHhcCCCCEEEEcCCCC
Q 011641 404 WDAYEATKDAHGVCILTEWDE-FKTLDYQR---IYDNMQKPAFVFDGRNVV 450 (480)
Q Consensus 404 ~~~~~a~~~ad~vvi~t~~~~-~~~~~~~~---~~~~~~~~~~viD~~~~~ 450 (480)
.++.++++++|+|+++++.+. .+.. ... +...+.+..+|+|..+..
T Consensus 78 ~~~~~~~~~~DvVi~av~~~~~~~~v-~~~~~~~~~~l~~~~~vv~~s~~~ 127 (316)
T 2uyy_A 78 RTPAEVVSTCDITFACVSDPKAAKDL-VLGPSGVLQGIRPGKCYVDMSTVD 127 (316)
T ss_dssp SCHHHHHHHCSEEEECCSSHHHHHHH-HHSTTCGGGGCCTTCEEEECSCCC
T ss_pred CCHHHHHhcCCEEEEeCCCHHHHHHH-HcCchhHhhcCCCCCEEEECCCCC
Confidence 788899999999999998643 2221 111 123455566899999865
No 438
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.54 E-value=0.04 Score=57.33 Aligned_cols=110 Identities=13% Similarity=0.089 Sum_probs=71.3
Q ss_pred CCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCccc------
Q 011641 323 SNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTM------ 396 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 396 (480)
..-||+|+|+.| -.+.++..|.+.|.+|.+||..-..-+.... . .-|+. .+.....
T Consensus 7 ~~~~I~VIG~G~----------vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~---~----~~~i~-e~gl~~~l~~~~~ 68 (478)
T 2y0c_A 7 GSMNLTIIGSGS----------VGLVTGACLADIGHDVFCLDVDQAKIDILNN---G----GVPIH-EPGLKEVIARNRS 68 (478)
T ss_dssp CCCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSCHHHHHHHHT---T----CCSSC-CTTHHHHHHHHHH
T ss_pred CCceEEEECcCH----------HHHHHHHHHHhCCCEEEEEECCHHHHHHHHC---C----CCCcC-CCCHHHHHHHhcc
Confidence 356999999988 7899999999999999999975332221111 0 01110 0000000
Q ss_pred ccceEEecCHHhhcccccEEEEEecCc---------ccccccHHHHHHhcCCCCEEEEcCCCC
Q 011641 397 VKQVSVVWDAYEATKDAHGVCILTEWD---------EFKTLDYQRIYDNMQKPAFVFDGRNVV 450 (480)
Q Consensus 397 ~~~~~~~~~~~~a~~~ad~vvi~t~~~---------~~~~~~~~~~~~~~~~~~~viD~~~~~ 450 (480)
..++.+.+++.++++++|+++++++-| .+..--.+.+...+++..+|++...+.
T Consensus 69 ~~~l~~ttd~~~a~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~STv~ 131 (478)
T 2y0c_A 69 AGRLRFSTDIEAAVAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTVP 131 (478)
T ss_dssp TTCEEEECCHHHHHHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCC
T ss_pred cCCEEEECCHHHHhhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCCcC
Confidence 124778889989999999999998875 222212345666677667889987553
No 439
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=95.53 E-value=0.0086 Score=59.15 Aligned_cols=72 Identities=18% Similarity=0.165 Sum_probs=48.7
Q ss_pred cEEEEECC-ChhHHHHHHHHHHcCCCCeEEEEECCH----HHHHHH---HcCCCCCcCCChHHHHhhhcCCCEEEecCHH
Q 011641 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISV----SRINAW---NSDQLPIYEPGLDGVVKQCRGKNLFFSTDVE 73 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~----~~v~~l---~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~ 73 (480)
|+|.|.|+ |++|..++..|.+. |++|++++|++ ++.+.+ ......+.. +.+.-..++.
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~------------~Dl~d~~~l~ 76 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDA--HRPTYILARPGPRSPSKAKIFKALEDKGAIIVY------------GLINEQEAME 76 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHT--TCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEE------------CCTTCHHHHH
T ss_pred CeEEEECCCcHHHHHHHHHHHHC--CCCEEEEECCCCCChhHHHHHHHHHhCCcEEEE------------eecCCHHHHH
Confidence 68999997 99999999999998 89999999976 454433 222111111 1111112344
Q ss_pred Hhhc--cCcEEEEecc
Q 011641 74 KHVS--EADIVFVSVN 87 (480)
Q Consensus 74 ~a~~--~aDvVii~Vp 87 (480)
++++ ++|+||-+.+
T Consensus 77 ~~~~~~~~d~Vi~~a~ 92 (346)
T 3i6i_A 77 KILKEHEIDIVVSTVG 92 (346)
T ss_dssp HHHHHTTCCEEEECCC
T ss_pred HHHhhCCCCEEEECCc
Confidence 5667 8999999875
No 440
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=95.52 E-value=0.09 Score=54.50 Aligned_cols=121 Identities=17% Similarity=0.205 Sum_probs=67.2
Q ss_pred CcEEEEECCChhHHH-HHHHHHHcCCCCeEEEEECCHHH-HHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhcc
Q 011641 1 MVKICCIGAGYVGGP-TMAVIALKCPSIEVAVVDISVSR-INAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE 78 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~-lA~~La~~~~G~~V~~~D~~~~~-v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (480)
+++|.|||+|..|.+ +|..|.+. |++|+++|..... .+.|.+.... +..-.+.+ .+++
T Consensus 18 ~~~i~viG~G~sG~s~~A~~l~~~--G~~V~~~D~~~~~~~~~l~~~gi~-----------------~~~g~~~~-~~~~ 77 (475)
T 1p3d_A 18 VQQIHFIGIGGAGMSGIAEILLNE--GYQISGSDIADGVVTQRLAQAGAK-----------------IYIGHAEE-HIEG 77 (475)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHH--TCEEEEEESCCSHHHHHHHHTTCE-----------------EEESCCGG-GGTT
T ss_pred CCEEEEEeecHHHHHHHHHHHHhC--CCEEEEECCCCCHHHHHHHhCCCE-----------------EECCCCHH-HcCC
Confidence 368999999999997 99999988 9999999986532 2334332111 11112332 3578
Q ss_pred CcEEEEeccCCCCCCCCC---CCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHH-HHHHHHhcC
Q 011641 79 ADIVFVSVNTPTKTQGLG---AGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEA-IEKILTHNS 145 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~---~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~-l~~~l~~~~ 145 (480)
+|+||+.-.-|.+..-.. ...-+-++.. +.+...++...+|-+..|..-+||.. +..+|++.+
T Consensus 78 a~~vv~s~~i~~~~~~~~~a~~~~i~vl~~~----~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G 144 (475)
T 1p3d_A 78 ASVVVVSSAIKDDNPELVTSKQKRIPVIQRA----QMLAEIMRFRHGIAVAGTHGKTTTTAMISMIYTQAK 144 (475)
T ss_dssp CSEEEECTTSCTTCHHHHHHHHTTCCEEEHH----HHHHHHHHTSEEEEEESSSCHHHHHHHHHHHHHHTT
T ss_pred CCEEEECCCCCCCCHHHHHHHHcCCcEEEHH----HHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhCC
Confidence 998887632221100000 0000111111 12223333345777778887777665 577887653
No 441
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=95.52 E-value=0.0039 Score=57.57 Aligned_cols=69 Identities=10% Similarity=0.323 Sum_probs=44.8
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEE-EEECCHH-HHHH-HHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc-
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVS-RINA-WNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS- 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~-~~D~~~~-~v~~-l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~- 77 (480)
.+|+|+|+|.+|..++..+.....|+++. ++|.|++ ++.. .-.| .| +.-.+++++.++
T Consensus 85 ~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~G-vp-----------------V~~~~dL~~~v~~ 146 (212)
T 3keo_A 85 TNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDG-IP-----------------VYGISTINDHLID 146 (212)
T ss_dssp EEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTTC-CB-----------------EEEGGGHHHHC-C
T ss_pred CEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeECC-eE-----------------EeCHHHHHHHHHH
Confidence 47999999999999998742111277755 5799987 5432 1111 12 222355666554
Q ss_pred -cCcEEEEeccC
Q 011641 78 -EADIVFVSVNT 88 (480)
Q Consensus 78 -~aDvVii~Vpt 88 (480)
+.|.+++|+|+
T Consensus 147 ~~Id~vIIAvPs 158 (212)
T 3keo_A 147 SDIETAILTVPS 158 (212)
T ss_dssp CSCCEEEECSCG
T ss_pred cCCCEEEEecCc
Confidence 58999999884
No 442
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=95.51 E-value=0.064 Score=51.54 Aligned_cols=102 Identities=14% Similarity=0.175 Sum_probs=72.4
Q ss_pred CCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCC---EEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccce
Q 011641 324 NKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKA---RLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQV 400 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~---~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
..||+|+|.. +.+..++..|.+.|. +|.+||+.....+.... ..++
T Consensus 3 ~~~I~iIG~G----------~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~---------------------~~gi 51 (280)
T 3tri_A 3 TSNITFIGGG----------NMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKE---------------------KCGV 51 (280)
T ss_dssp CSCEEEESCS----------HHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHH---------------------TTCC
T ss_pred CCEEEEEccc----------HHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHH---------------------HcCC
Confidence 4689999974 588899999999998 99999997654322211 0146
Q ss_pred EEecCHHhhcccccEEEEEecCcccccccHHHHHHh-cCCCCEEEEcCCCCChhhhhh
Q 011641 401 SVVWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDN-MQKPAFVFDGRNVVDANKLRE 457 (480)
Q Consensus 401 ~~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~-~~~~~~viD~~~~~~~~~~~~ 457 (480)
....+..++++++|+|+++++...++++ ++++... +++..+|+..-+=+....+.+
T Consensus 52 ~~~~~~~~~~~~aDvVilav~p~~~~~v-l~~l~~~~l~~~~iiiS~~agi~~~~l~~ 108 (280)
T 3tri_A 52 HTTQDNRQGALNADVVVLAVKPHQIKMV-CEELKDILSETKILVISLAVGVTTPLIEK 108 (280)
T ss_dssp EEESCHHHHHSSCSEEEECSCGGGHHHH-HHHHHHHHHTTTCEEEECCTTCCHHHHHH
T ss_pred EEeCChHHHHhcCCeEEEEeCHHHHHHH-HHHHHhhccCCCeEEEEecCCCCHHHHHH
Confidence 6778899999999999999976555442 3456655 554447887766666555543
No 443
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=95.47 E-value=0.043 Score=53.55 Aligned_cols=103 Identities=14% Similarity=0.076 Sum_probs=64.7
Q ss_pred EEEEE-CC-ChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc--c
Q 011641 3 KICCI-GA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS--E 78 (480)
Q Consensus 3 kI~VI-Gl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--~ 78 (480)
+++|| |+ |.+|...+..|.+. |++ .++++||.+. +. .+ .++.+..+++++.+ .
T Consensus 15 siaVV~Gasg~~G~~~~~~l~~~--G~~-~v~~VnP~~~-----g~-~i--------------~G~~vy~sl~el~~~~~ 71 (305)
T 2fp4_A 15 TKVICQGFTGKQGTFHSQQALEY--GTN-LVGGTTPGKG-----GK-TH--------------LGLPVFNTVKEAKEQTG 71 (305)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--TCE-EEEEECTTCT-----TC-EE--------------TTEEEESSHHHHHHHHC
T ss_pred cEEEEECCCCCHHHHHHHHHHHC--CCc-EEEEeCCCcC-----cc-eE--------------CCeeeechHHHhhhcCC
Confidence 58888 98 99999999999988 898 5567776431 00 00 24677788888777 8
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 79 aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
+|++++++|.+ ...++++++... .-..+|+..+.++....+++.+..++.
T Consensus 72 vD~avI~vP~~---------------~~~~~~~e~i~~-Gi~~iv~~t~G~~~~~~~~l~~~a~~~ 121 (305)
T 2fp4_A 72 ATASVIYVPPP---------------FAAAAINEAIDA-EVPLVVCITEGIPQQDMVRVKHRLLRQ 121 (305)
T ss_dssp CCEEEECCCHH---------------HHHHHHHHHHHT-TCSEEEECCCCCCHHHHHHHHHHHTTC
T ss_pred CCEEEEecCHH---------------HHHHHHHHHHHC-CCCEEEEECCCCChHHHHHHHHHHHhc
Confidence 99999998842 234455554432 223445443333322223565566554
No 444
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=95.47 E-value=0.034 Score=53.09 Aligned_cols=92 Identities=16% Similarity=0.089 Sum_probs=63.4
Q ss_pred eEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceEEecC
Q 011641 326 KIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVSVVWD 405 (480)
Q Consensus 326 ~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (480)
+|+|+|.. .-+..++..|.+.|.+|.+||+.....+.....+ .. .....+
T Consensus 2 ~i~iiG~G----------~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g------------------~~--~~~~~~ 51 (279)
T 2f1k_A 2 KIGVVGLG----------LIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQ------------------LV--DEAGQD 51 (279)
T ss_dssp EEEEECCS----------HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT------------------SC--SEEESC
T ss_pred EEEEEcCc----------HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCC------------------CC--ccccCC
Confidence 78999974 4778899999999999999998643322211111 00 023567
Q ss_pred HHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCC
Q 011641 406 AYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNV 449 (480)
Q Consensus 406 ~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~ 449 (480)
+.++ +++|+|+++++.+...+. .+++...+++..+|+|..++
T Consensus 52 ~~~~-~~~D~vi~av~~~~~~~~-~~~l~~~~~~~~~vv~~~~~ 93 (279)
T 2f1k_A 52 LSLL-QTAKIIFLCTPIQLILPT-LEKLIPHLSPTAIVTDVASV 93 (279)
T ss_dssp GGGG-TTCSEEEECSCHHHHHHH-HHHHGGGSCTTCEEEECCSC
T ss_pred HHHh-CCCCEEEEECCHHHHHHH-HHHHHhhCCCCCEEEECCCC
Confidence 7887 999999999997654442 34566666666699998553
No 445
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=95.46 E-value=0.026 Score=53.12 Aligned_cols=100 Identities=12% Similarity=0.164 Sum_probs=68.1
Q ss_pred CeEEEEeeccCCCCCcccCChHHHHHHHHHhCCC----EEEEEcCCCChHHHH-HhhhccccCCCCCCCCCCCCcccccc
Q 011641 325 KKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKA----RLSIYDPQVTEDQIQ-RDLTMNKFDWDHPLHLQPMSPTMVKQ 399 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~----~V~~~DP~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
.||+|+|+.. .+..+++.|.+.|. +|.+||+.-...+.. ..+ +
T Consensus 3 ~~i~iIG~G~----------mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~----------------------g 50 (247)
T 3gt0_A 3 KQIGFIGCGN----------MGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKY----------------------G 50 (247)
T ss_dssp CCEEEECCSH----------HHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHH----------------------C
T ss_pred CeEEEECccH----------HHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHh----------------------C
Confidence 4899999754 78899999999998 999999864332211 111 3
Q ss_pred eEEecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCCCChhhhhh
Q 011641 400 VSVVWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNVVDANKLRE 457 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~~~~~~~~~ 457 (480)
+....+..++++++|+|+++++...+.++ ++++...+++..+|+..-+-++.+.+++
T Consensus 51 ~~~~~~~~e~~~~aDvVilav~~~~~~~v-~~~l~~~l~~~~~vvs~~~gi~~~~l~~ 107 (247)
T 3gt0_A 51 LTTTTDNNEVAKNADILILSIKPDLYASI-INEIKEIIKNDAIIVTIAAGKSIESTEN 107 (247)
T ss_dssp CEECSCHHHHHHHCSEEEECSCTTTHHHH-C---CCSSCTTCEEEECSCCSCHHHHHH
T ss_pred CEEeCChHHHHHhCCEEEEEeCHHHHHHH-HHHHHhhcCCCCEEEEecCCCCHHHHHH
Confidence 56678899999999999999965544432 2344444554458886666666655543
No 446
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=95.45 E-value=0.013 Score=61.43 Aligned_cols=36 Identities=19% Similarity=0.217 Sum_probs=32.8
Q ss_pred CcEEEEEC-CChhHHHHHHHHHHcCCCCeEEEEECCHHH
Q 011641 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSR 38 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~ 38 (480)
+|||.|.| +|++|..++..|.++ |++|+++++++..
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~--G~~V~~l~R~~~~ 183 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTG--GHEVIQLVRKEPK 183 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCCC
Confidence 58999999 699999999999998 9999999998653
No 447
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=95.45 E-value=0.021 Score=54.93 Aligned_cols=97 Identities=11% Similarity=0.104 Sum_probs=67.3
Q ss_pred CCeEEEEeeccCCCCCcccCChHHHHHHHHHhC--CCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceE
Q 011641 324 NKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGD--KARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVS 401 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~--g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (480)
..+|+|+|+.. .+..++..|.+. |.+|.+||+.....+.....+ . ...
T Consensus 6 ~~~I~iIG~G~----------mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g------------------~--~~~ 55 (290)
T 3b1f_A 6 EKTIYIAGLGL----------IGASLALGIKRDHPHYKIVGYNRSDRSRDIALERG------------------I--VDE 55 (290)
T ss_dssp CCEEEEECCSH----------HHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTT------------------S--CSE
T ss_pred cceEEEEeeCH----------HHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcC------------------C--ccc
Confidence 46899999854 778899999987 689999998643322211111 0 003
Q ss_pred EecCHHhhcccccEEEEEecCcccccccHHHHHHh-cCCCCEEEEcCCCCC
Q 011641 402 VVWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDN-MQKPAFVFDGRNVVD 451 (480)
Q Consensus 402 ~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~-~~~~~~viD~~~~~~ 451 (480)
...++.++++++|+|+++++.+...++ .+++... +++..+|+|..+...
T Consensus 56 ~~~~~~~~~~~aDvVilavp~~~~~~v-~~~l~~~~l~~~~ivi~~~~~~~ 105 (290)
T 3b1f_A 56 ATADFKVFAALADVIILAVPIKKTIDF-IKILADLDLKEDVIITDAGSTKY 105 (290)
T ss_dssp EESCTTTTGGGCSEEEECSCHHHHHHH-HHHHHTSCCCTTCEEECCCSCHH
T ss_pred ccCCHHHhhcCCCEEEEcCCHHHHHHH-HHHHHhcCCCCCCEEEECCCCch
Confidence 456778888999999999998776442 3456665 666669999877643
No 448
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=95.44 E-value=0.03 Score=55.78 Aligned_cols=35 Identities=26% Similarity=0.407 Sum_probs=32.2
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHH
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSR 38 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~ 38 (480)
++|+|+|+|.+|..+|..+... |.+|+++|+++++
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~--GakVvvsD~~~~~ 210 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEA--GAQLLVADTDTER 210 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCEEEEEeCCccH
Confidence 4799999999999999999987 8999999999875
No 449
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.41 E-value=0.011 Score=54.29 Aligned_cols=32 Identities=25% Similarity=0.329 Sum_probs=29.9
Q ss_pred EEEEECCChhHHHHHHHHHHcCCCCeEEEEECCH
Q 011641 3 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV 36 (480)
Q Consensus 3 kI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~ 36 (480)
.|+|||+|..|+++|..|+++ |++|+++|.++
T Consensus 4 dV~IIGaGpaGL~aA~~La~~--G~~V~v~Ek~~ 35 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAA--GHQVHLFDKSR 35 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHC--CCCEEEEECCC
Confidence 599999999999999999999 99999999864
No 450
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=95.39 E-value=0.038 Score=54.06 Aligned_cols=33 Identities=24% Similarity=0.424 Sum_probs=29.9
Q ss_pred CcEEEEEC-CChhHHHHHHHHHHcCCCCeEEEEECC
Q 011641 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDIS 35 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~ 35 (480)
||+|.|.| .|.+|..++..|++. |++|+++|++
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~ 34 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQ--GIDLIVFDNL 34 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhC--CCEEEEEeCC
Confidence 78999999 699999999999998 9999999974
No 451
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=95.35 E-value=0.057 Score=50.94 Aligned_cols=96 Identities=15% Similarity=0.169 Sum_probs=66.5
Q ss_pred CeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHH-HHHhhhccccCCCCCCCCCCCCcccccceEEe
Q 011641 325 KKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQ-IQRDLTMNKFDWDHPLHLQPMSPTMVKQVSVV 403 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (480)
.||+|+|+.. .+..+++.|.+.|.+|.+||+.....+ +...+ ++...
T Consensus 4 m~i~iiG~G~----------mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~----------------------g~~~~ 51 (259)
T 2ahr_A 4 MKIGIIGVGK----------MASAIIKGLKQTPHELIISGSSLERSKEIAEQL----------------------ALPYA 51 (259)
T ss_dssp CEEEEECCSH----------HHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH----------------------TCCBC
T ss_pred cEEEEECCCH----------HHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHc----------------------CCEee
Confidence 4899999754 678899999999999999998643221 11111 23445
Q ss_pred cCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCCCChhhhhh
Q 011641 404 WDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNVVDANKLRE 457 (480)
Q Consensus 404 ~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~~~~~~~~~ 457 (480)
.++.++++++|+|+++++.... ..+...+++..+|+|.-+-++.+.+++
T Consensus 52 ~~~~~~~~~~D~Vi~~v~~~~~-----~~v~~~l~~~~~vv~~~~~~~~~~l~~ 100 (259)
T 2ahr_A 52 MSHQDLIDQVDLVILGIKPQLF-----ETVLKPLHFKQPIISMAAGISLQRLAT 100 (259)
T ss_dssp SSHHHHHHTCSEEEECSCGGGH-----HHHHTTSCCCSCEEECCTTCCHHHHHH
T ss_pred CCHHHHHhcCCEEEEEeCcHhH-----HHHHHHhccCCEEEEeCCCCCHHHHHH
Confidence 6788889999999999984332 234444444558999977666655543
No 452
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=95.33 E-value=0.016 Score=56.24 Aligned_cols=71 Identities=18% Similarity=0.180 Sum_probs=47.1
Q ss_pred EEEEECC-ChhHHHHHHHHHHcCCCCeEEEEECCHH-HHHH---HHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc
Q 011641 3 KICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVS-RINA---WNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS 77 (480)
Q Consensus 3 kI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~-~v~~---l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (480)
+|.|.|. |.+|..++..|.+. |++|++++|+++ +.+. +......+.. +.+.-..++.++++
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~------------~Dl~d~~~l~~a~~ 78 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLKL--GHPTYVFTRPNSSKTTLLDEFQSLGAIIVK------------GELDEHEKLVELMK 78 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHHT--TCCEEEEECTTCSCHHHHHHHHHTTCEEEE------------CCTTCHHHHHHHHT
T ss_pred eEEEECCCchHHHHHHHHHHHC--CCcEEEEECCCCchhhHHHHhhcCCCEEEE------------ecCCCHHHHHHHHc
Confidence 7999995 99999999999998 999999999874 3222 2221111110 11110123455678
Q ss_pred cCcEEEEecc
Q 011641 78 EADIVFVSVN 87 (480)
Q Consensus 78 ~aDvVii~Vp 87 (480)
++|+||.+.+
T Consensus 79 ~~d~vi~~a~ 88 (318)
T 2r6j_A 79 KVDVVISALA 88 (318)
T ss_dssp TCSEEEECCC
T ss_pred CCCEEEECCc
Confidence 9999998865
No 453
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.33 E-value=0.067 Score=49.68 Aligned_cols=33 Identities=15% Similarity=0.267 Sum_probs=30.1
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCH
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV 36 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~ 36 (480)
++|.|||.|.+|..-+..|.+. |.+|++++.+.
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~--GA~VtVvap~~ 64 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQE--GAAITVVAPTV 64 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGG--CCCEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEECCCC
Confidence 5799999999999999999998 89999998754
No 454
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=95.32 E-value=0.047 Score=53.85 Aligned_cols=42 Identities=14% Similarity=0.271 Sum_probs=31.2
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEE-C-CHHHHHHHH
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVD-I-SVSRINAWN 43 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D-~-~~~~v~~l~ 43 (480)
|+||||+|.|++|.-+...+..+ |..+|.++. . +.+....|.
T Consensus 1 ~ikVgI~G~G~iG~~l~R~l~~~-~~veiv~i~~~~~~~~~a~l~ 44 (330)
T 1gad_O 1 TIKVGINGFGRIGRIVFRAAQKR-SDIEIVAINDLLDADYMAYML 44 (330)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC-SSEEEEEEECSSCHHHHHHHH
T ss_pred CeEEEEECcCHHHHHHHHHHHcC-CCeEEEEEcCCCChhHHhHhh
Confidence 68999999999999999998876 567776653 3 455444333
No 455
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=95.31 E-value=0.1 Score=50.44 Aligned_cols=91 Identities=12% Similarity=0.082 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHhcCcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCC
Q 011641 307 KSRFVNRVVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHP 386 (480)
Q Consensus 307 ~~~~~~~~~~~l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~ 386 (480)
|.-+++. ++..+.++.+++|.|+|.+- .-...++..|...|++|.+.+-.
T Consensus 149 p~gi~~l-l~~~~i~l~gk~vvVIG~s~---------iVG~p~A~lL~~~gAtVtv~hs~-------------------- 198 (301)
T 1a4i_A 149 PKGCLEL-IKETGVPIAGRHAVVVGRSK---------IVGAPMHDLLLWNNATVTTCHSK-------------------- 198 (301)
T ss_dssp HHHHHHH-HHTTTCCCTTCEEEEECCCT---------TTHHHHHHHHHHTTCEEEEECTT--------------------
T ss_pred HHHHHHH-HHHcCCCCCCCEEEEECCCc---------hHHHHHHHHHHhCCCeEEEEECC--------------------
Confidence 3444343 34445578999999999631 34788999999999999998632
Q ss_pred CCCCCCCcccccceEEecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCC
Q 011641 387 LHLQPMSPTMVKQVSVVWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNV 449 (480)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~ 449 (480)
..++.+.++.||.||.++..+.|-.-+| .++.++|||.---
T Consensus 199 ----------------t~~L~~~~~~ADIVI~Avg~p~~I~~~~------vk~GavVIDVgi~ 239 (301)
T 1a4i_A 199 ----------------TAHLDEEVNKGDILVVATGQPEMVKGEW------IKPGAIVIDCGIN 239 (301)
T ss_dssp ----------------CSSHHHHHTTCSEEEECCCCTTCBCGGG------SCTTCEEEECCCB
T ss_pred ----------------cccHHHHhccCCEEEECCCCcccCCHHH------cCCCcEEEEccCC
Confidence 1356788999999999999998744333 3556799998653
No 456
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=95.28 E-value=0.058 Score=56.06 Aligned_cols=115 Identities=10% Similarity=0.213 Sum_probs=77.1
Q ss_pred eEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHH-HHHhhhccccCCCCCCCCCCCCcccccceEEec
Q 011641 326 KIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQ-IQRDLTMNKFDWDHPLHLQPMSPTMVKQVSVVW 404 (480)
Q Consensus 326 ~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (480)
+|+|+|++ +....++..|.++|.+|.+||......+ +...++ ..| ...++....
T Consensus 3 kIgVIG~G----------~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g------~~~---------~~~~i~~~~ 57 (478)
T 1pgj_A 3 DVGVVGLG----------VMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANA------SAP---------FAGNLKAFE 57 (478)
T ss_dssp SEEEECCS----------HHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTT------TST---------TGGGEEECS
T ss_pred EEEEEChH----------HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcC------CCC---------CCCCeEEEC
Confidence 69999985 4788999999999999999998543322 111111 001 012366778
Q ss_pred CHHhhccc---ccEEEEEecCc-ccccccHHHHHHhcCCCCEEEEcCCCCChh------hhhhcCcEEEEec
Q 011641 405 DAYEATKD---AHGVCILTEWD-EFKTLDYQRIYDNMQKPAFVFDGRNVVDAN------KLREIGFIVYSIG 466 (480)
Q Consensus 405 ~~~~a~~~---ad~vvi~t~~~-~~~~~~~~~~~~~~~~~~~viD~~~~~~~~------~~~~~g~~y~~iG 466 (480)
++++++++ +|+|+++++.+ ..++ -.+.+...+++..+|||+.+..... .+.+.|+.|.+.+
T Consensus 58 ~~~e~v~~l~~aDvVilaVp~~~~v~~-vl~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~p 128 (478)
T 1pgj_A 58 TMEAFAASLKKPRKALILVQAGAATDS-TIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMG 128 (478)
T ss_dssp CHHHHHHHBCSSCEEEECCCCSHHHHH-HHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred CHHHHHhcccCCCEEEEecCChHHHHH-HHHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEee
Confidence 88888774 99999999986 4444 2356677776666999998877432 2233577776553
No 457
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=95.26 E-value=0.02 Score=55.07 Aligned_cols=72 Identities=15% Similarity=0.160 Sum_probs=48.1
Q ss_pred cEEEEECC-ChhHHHHHHHHHHcCCC-CeEEEEECCHHHH--HHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhc
Q 011641 2 VKICCIGA-GYVGGPTMAVIALKCPS-IEVAVVDISVSRI--NAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS 77 (480)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~La~~~~G-~~V~~~D~~~~~v--~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (480)
|+|.|.|. |.+|..++..|+++ | ++|++++|++++. +.+......+.. +.+.-..++.++++
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~--g~~~V~~~~R~~~~~~~~~l~~~~~~~~~------------~D~~d~~~l~~~~~ 71 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLED--GTFKVRVVTRNPRKKAAKELRLQGAEVVQ------------GDQDDQVIMELALN 71 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--CSSEEEEEESCTTSHHHHHHHHTTCEEEE------------CCTTCHHHHHHHHT
T ss_pred CEEEEECCCchHHHHHHHHHHhc--CCceEEEEEcCCCCHHHHHHHHCCCEEEE------------ecCCCHHHHHHHHh
Confidence 68999997 99999999999998 7 9999999987653 233321111100 11110123445678
Q ss_pred cCcEEEEecc
Q 011641 78 EADIVFVSVN 87 (480)
Q Consensus 78 ~aDvVii~Vp 87 (480)
++|+||.+.+
T Consensus 72 ~~d~vi~~a~ 81 (299)
T 2wm3_A 72 GAYATFIVTN 81 (299)
T ss_dssp TCSEEEECCC
T ss_pred cCCEEEEeCC
Confidence 8999998864
No 458
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=95.24 E-value=0.069 Score=53.54 Aligned_cols=97 Identities=14% Similarity=0.107 Sum_probs=59.2
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCC-eEEEEECC----HHHHHH-HHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHh
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDIS----VSRINA-WNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKH 75 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~----~~~v~~-l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a 75 (480)
.||.|+|+|.+|...|..|... |. +|+++|++ .++.+. ++ ..++.+.+.. ....-..+++++
T Consensus 193 ~kVVv~GAGaAG~~iAkll~~~--G~~~I~v~Dr~Gli~~~R~~~~L~---------~~k~~~A~~~-~~~~~~~~L~ea 260 (388)
T 1vl6_A 193 VKVVVNGIGAAGYNIVKFLLDL--GVKNVVAVDRKGILNENDPETCLN---------EYHLEIARIT-NPERLSGDLETA 260 (388)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCEEEEEETTEECCTTSGGGCSS---------HHHHHHHHTS-CTTCCCSCHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHhC--CCCeEEEEECCCcccCCCcccccC---------HHHHHHHHhh-hccCchhhHHHH
Confidence 4899999999999999999988 76 89999997 443110 00 0001111100 001113578899
Q ss_pred hccCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecC
Q 011641 76 VSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST 128 (480)
Q Consensus 76 ~~~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~ST 128 (480)
++++|++|=+.. |.- . -+++.+.++++.+|+..|.
T Consensus 261 v~~ADVlIG~Sa-p~l---------~--------t~emVk~Ma~~pIIfalSN 295 (388)
T 1vl6_A 261 LEGADFFIGVSR-GNI---------L--------KPEWIKKMSRKPVIFALAN 295 (388)
T ss_dssp HTTCSEEEECSC-SSC---------S--------CHHHHTTSCSSCEEEECCS
T ss_pred HccCCEEEEeCC-CCc---------c--------CHHHHHhcCCCCEEEEcCC
Confidence 999999877754 421 1 1233334556778877664
No 459
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=95.23 E-value=0.014 Score=55.45 Aligned_cols=73 Identities=10% Similarity=0.188 Sum_probs=47.4
Q ss_pred EEEEECC-ChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 3 KICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 3 kI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
||.|.|. |.+|..++..|.++.+|++|+++++++++.+.+......+.. +.+.-..+..++++++|+
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~------------~D~~d~~~~~~~~~~~d~ 68 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQ------------ADYGDEAALTSALQGVEK 68 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEE------------CCTTCHHHHHHHTTTCSE
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEE------------cCCCCHHHHHHHHhCCCE
Confidence 5889996 999999999998742379999999988765554432111110 111101234456778999
Q ss_pred EEEecc
Q 011641 82 VFVSVN 87 (480)
Q Consensus 82 Vii~Vp 87 (480)
||-+..
T Consensus 69 vi~~a~ 74 (286)
T 2zcu_A 69 LLLISS 74 (286)
T ss_dssp EEECC-
T ss_pred EEEeCC
Confidence 998865
No 460
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=95.23 E-value=0.16 Score=52.56 Aligned_cols=111 Identities=14% Similarity=0.141 Sum_probs=72.1
Q ss_pred CCCeEEEEeeccCCCCCcccCChHHHHHHHHHhC-CC-EEEEEcCCCC----hHHHHHhhhccccCCCCCCC-CCCCCcc
Q 011641 323 SNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGD-KA-RLSIYDPQVT----EDQIQRDLTMNKFDWDHPLH-LQPMSPT 395 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~-g~-~V~~~DP~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 395 (480)
.-.||+|+|+.| -.+.++..|.+. |. +|.+||..-. .-+.... ...|++ ..+....
T Consensus 17 ~~mkIaVIGlG~----------mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~-------g~~~i~~~e~gl~~ 79 (478)
T 3g79_A 17 PIKKIGVLGMGY----------VGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNR-------GESPLKGEEPGLEE 79 (478)
T ss_dssp SCCEEEEECCST----------THHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTT-------TCCCSSCCGGGHHH
T ss_pred CCCEEEEECcCH----------HHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHh-------cCCCccccCCCHHH
Confidence 346999999987 779999999999 99 9999998765 3222111 001110 0000000
Q ss_pred ------cccceEEecCHHhhcccccEEEEEecCccc--cc--cc-------HHHHHHhcCCCCEEEEcCCCCC
Q 011641 396 ------MVKQVSVVWDAYEATKDAHGVCILTEWDEF--KT--LD-------YQRIYDNMQKPAFVFDGRNVVD 451 (480)
Q Consensus 396 ------~~~~~~~~~~~~~a~~~ad~vvi~t~~~~~--~~--~~-------~~~~~~~~~~~~~viD~~~~~~ 451 (480)
....+.+.++ .+++++||+++++++-+.- .+ .| .+.+...+++..+|||...+..
T Consensus 80 l~~~~~~~g~l~~ttd-~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~p 151 (478)
T 3g79_A 80 LIGKVVKAGKFECTPD-FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITP 151 (478)
T ss_dssp HHHHHHHTTCEEEESC-GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCT
T ss_pred HHHhhcccCCeEEeCc-HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCCh
Confidence 0244777777 7899999999999876631 11 22 2466777777779999876654
No 461
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=95.23 E-value=0.054 Score=51.22 Aligned_cols=90 Identities=12% Similarity=0.021 Sum_probs=61.8
Q ss_pred eEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceEEecC
Q 011641 326 KIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVSVVWD 405 (480)
Q Consensus 326 ~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (480)
||+|+|+.. ....++..|.+.|.+|.+||+.-.++... .+. ..++. .+
T Consensus 2 ~I~iIG~G~----------mG~~la~~l~~~g~~V~~~~~~~~~~~~~-~~~-------------------~~g~~--~~ 49 (264)
T 1i36_A 2 RVGFIGFGE----------VAQTLASRLRSRGVEVVTSLEGRSPSTIE-RAR-------------------TVGVT--ET 49 (264)
T ss_dssp EEEEESCSH----------HHHHHHHHHHHTTCEEEECCTTCCHHHHH-HHH-------------------HHTCE--EC
T ss_pred eEEEEechH----------HHHHHHHHHHHCCCeEEEeCCccCHHHHH-HHH-------------------HCCCc--CC
Confidence 799999754 78899999999999999999842332221 111 01233 56
Q ss_pred HHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCCC
Q 011641 406 AYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNVV 450 (480)
Q Consensus 406 ~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~~ 450 (480)
+.++++++|+|+++++.+..... ...+...++ + +|+|..++-
T Consensus 50 ~~~~~~~aDvvi~~v~~~~~~~~-~~~~~~~~~-~-~vi~~s~~~ 91 (264)
T 1i36_A 50 SEEDVYSCPVVISAVTPGVALGA-ARRAGRHVR-G-IYVDINNIS 91 (264)
T ss_dssp CHHHHHTSSEEEECSCGGGHHHH-HHHHHTTCC-S-EEEECSCCC
T ss_pred HHHHHhcCCEEEEECCCHHHHHH-HHHHHHhcC-c-EEEEccCCC
Confidence 78888999999999998753321 245555554 4 899996553
No 462
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=95.23 E-value=0.024 Score=54.54 Aligned_cols=93 Identities=11% Similarity=0.089 Sum_probs=65.0
Q ss_pred CeEEEEee-ccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceEEe
Q 011641 325 KKIAVLGF-AFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVSVV 403 (480)
Q Consensus 325 ~~v~ilGl-a~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (480)
.+|+|+|+ .. .+..+++.|.+.|.+|.+||+.....+....+ ++..
T Consensus 12 m~I~iIG~tG~----------mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~----------------------g~~~- 58 (286)
T 3c24_A 12 KTVAILGAGGK----------MGARITRKIHDSAHHLAAIEIAPEGRDRLQGM----------------------GIPL- 58 (286)
T ss_dssp CEEEEETTTSH----------HHHHHHHHHHHSSSEEEEECCSHHHHHHHHHT----------------------TCCC-
T ss_pred CEEEEECCCCH----------HHHHHHHHHHhCCCEEEEEECCHHHHHHHHhc----------------------CCCc-
Confidence 48999997 43 77899999999999999999854322211111 1222
Q ss_pred cCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCCCC
Q 011641 404 WDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNVVD 451 (480)
Q Consensus 404 ~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~~~ 451 (480)
.+..++++++|+|+++++.+..+++ .+++...+++..+|+|+.+..+
T Consensus 59 ~~~~~~~~~aDvVi~av~~~~~~~v-~~~l~~~l~~~~ivv~~s~~~~ 105 (286)
T 3c24_A 59 TDGDGWIDEADVVVLALPDNIIEKV-AEDIVPRVRPGTIVLILDAAAP 105 (286)
T ss_dssp CCSSGGGGTCSEEEECSCHHHHHHH-HHHHGGGSCTTCEEEESCSHHH
T ss_pred CCHHHHhcCCCEEEEcCCchHHHHH-HHHHHHhCCCCCEEEECCCCch
Confidence 2567788999999999988765442 2455555665569999877654
No 463
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=95.19 E-value=0.018 Score=50.93 Aligned_cols=34 Identities=24% Similarity=0.308 Sum_probs=31.8
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCH
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV 36 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~ 36 (480)
|++|.|||.|..|+.+|..|++. |.+|+++++++
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~--g~~v~lie~~~ 34 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARA--GLKVLVLDGGR 34 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCcEEEEeCCC
Confidence 67999999999999999999998 99999999875
No 464
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=95.19 E-value=0.082 Score=52.46 Aligned_cols=32 Identities=22% Similarity=0.287 Sum_probs=29.9
Q ss_pred cEEEEEC-CChhHHHHHHHHHHcCCCC-eEEEEECC
Q 011641 2 VKICCIG-AGYVGGPTMAVIALKCPSI-EVAVVDIS 35 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~-~V~~~D~~ 35 (480)
|||.|.| .|.+|..++..|+++ |+ +|+..|++
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~--g~~~v~~~d~~ 34 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTST--TDHHIFEVHRQ 34 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--CCCEEEECCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCCEEEEECCC
Confidence 8999999 799999999999998 88 99999984
No 465
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=95.15 E-value=0.11 Score=50.00 Aligned_cols=89 Identities=12% Similarity=0.043 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHhcCcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCC
Q 011641 307 KSRFVNRVVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHP 386 (480)
Q Consensus 307 ~~~~~~~~~~~l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~ 386 (480)
|.-+++. ++..+.++.+++|.|+|.+- .-...++..|...|++|.+.+-..
T Consensus 143 p~gi~~l-l~~~~i~l~gk~vvVIG~s~---------iVG~p~A~lL~~~gAtVtv~hs~t------------------- 193 (288)
T 1b0a_A 143 PRGIVTL-LERYNIDTFGLNAVVIGASN---------IVGRPMSMELLLAGCTTTVTHRFT------------------- 193 (288)
T ss_dssp HHHHHHH-HHHTTCCCTTCEEEEECCCT---------TTHHHHHHHHHTTTCEEEEECSSC-------------------
T ss_pred HHHHHHH-HHHcCCCCCCCEEEEECCCh---------HHHHHHHHHHHHCCCeEEEEeCCc-------------------
Confidence 3444443 44455678999999999632 247889999999999999986221
Q ss_pred CCCCCCCcccccceEEecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcC
Q 011641 387 LHLQPMSPTMVKQVSVVWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGR 447 (480)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~ 447 (480)
.++.+.+++||.||.++..+.|-.-+| .++.++|||.-
T Consensus 194 -----------------~~L~~~~~~ADIVI~Avg~p~lI~~~~------vk~GavVIDVg 231 (288)
T 1b0a_A 194 -----------------KNLRHHVENADLLIVAVGKPGFIPGDW------IKEGAIVIDVG 231 (288)
T ss_dssp -----------------SCHHHHHHHCSEEEECSCCTTCBCTTT------SCTTCEEEECC
T ss_pred -----------------hhHHHHhccCCEEEECCCCcCcCCHHH------cCCCcEEEEcc
Confidence 356788999999999999998744333 35567999975
No 466
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.13 E-value=0.068 Score=54.84 Aligned_cols=114 Identities=12% Similarity=0.136 Sum_probs=66.4
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhhccCcE
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (480)
+||.|||+|..|.+.|..|+++ |++|+++|.....- +...+. .| -++..-....+.+.++|.
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~--G~~v~~~D~~~~~~-----~~~~l~-~G----------~~~~~g~~~~~~~~~~d~ 67 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLAR--GVTPRVMDTRMTPP-----GLDKLP-EA----------VERHTGSLNDEWLMAADL 67 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTT--TCCCEEEESSSSCT-----TGGGSC-TT----------SCEEESSCCHHHHHTCSE
T ss_pred CEEEEEeecHHHHHHHHHHHhC--CCEEEEEECCCCcc-----hhHHhh-CC----------CEEEECCCcHHHhccCCE
Confidence 6899999999999999888888 99999999854310 000000 01 112212212445678999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHH----------HHHHhhCCCCcEEEEecCCCcchHHH-HHHHHHhcC
Q 011641 82 VFVSVNTPTKTQGLGAGKAADLTYWESAA----------RVIADVSKSDKIVVEKSTVPVKTAEA-IEKILTHNS 145 (480)
Q Consensus 82 Vii~Vptp~~~~~~~~~~~~d~~~v~~~~----------~~i~~~l~~~~iVi~~STv~~gt~~~-l~~~l~~~~ 145 (480)
||++..-|.+ .+ .+..+. +.+...++ ..+|-+..|..-+||.. +..+|++.+
T Consensus 68 vV~s~gi~~~--------~p---~~~~a~~~~~~v~~~~~~~~~~~~-~~vI~VTGTnGKTTT~~ml~~iL~~~g 130 (439)
T 2x5o_A 68 IVASPGIALA--------HP---SLSAAADAGIEIVGDIELFCREAQ-APIVAITGSNGKSTVTTLVGEMAKAAG 130 (439)
T ss_dssp EEECTTSCTT--------CH---HHHHHHHTTCEEECHHHHHHHHCC-SCEEEEECSSSHHHHHHHHHHHHHHTT
T ss_pred EEeCCCCCCC--------CH---HHHHHHHCCCcEEEHHHHHHHhcC-CCEEEEECCCCHHHHHHHHHHHHHhcC
Confidence 9887433221 11 122211 11222333 56777778887777665 567787653
No 467
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.13 E-value=0.088 Score=51.48 Aligned_cols=74 Identities=18% Similarity=0.220 Sum_probs=51.7
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCC-eEEEEECC---HHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEe--cCH---
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDIS---VSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFS--TDV--- 72 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~---~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t--~d~--- 72 (480)
.++.|+|+|-+|.+++..|++. |. +|++++|+ .++.+++.+. +-.. ....+... .+.
T Consensus 149 k~~lVlGAGGaaraia~~L~~~--G~~~v~v~nRt~~~~~~a~~la~~-----------~~~~-~~~~v~~~~~~~l~~~ 214 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIE--GIKEIKLFNRKDDFFEKAVAFAKR-----------VNEN-TDCVVTVTDLADQHAF 214 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEEECSSTHHHHHHHHHHH-----------HHHH-SSCEEEEEETTCHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHc--CCCEEEEEECCCchHHHHHHHHHH-----------hhhc-cCcceEEechHhhhhh
Confidence 4789999999999999999998 87 89999999 8877776531 0000 00112221 232
Q ss_pred HHhhccCcEEEEeccCC
Q 011641 73 EKHVSEADIVFVSVNTP 89 (480)
Q Consensus 73 ~~a~~~aDvVii~Vptp 89 (480)
.+.+.++|+||-|+|..
T Consensus 215 ~~~l~~~DiIINaTp~G 231 (312)
T 3t4e_A 215 TEALASADILTNGTKVG 231 (312)
T ss_dssp HHHHHHCSEEEECSSTT
T ss_pred HhhccCceEEEECCcCC
Confidence 44578899999997754
No 468
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=95.10 E-value=0.02 Score=55.05 Aligned_cols=93 Identities=11% Similarity=0.028 Sum_probs=63.4
Q ss_pred CeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceEEec
Q 011641 325 KKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVSVVW 404 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (480)
.+|+|+|+.. .+..++..|.+.|.+|.+|| .....+.... .++....
T Consensus 4 m~i~iiG~G~----------~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~----------------------~g~~~~~ 50 (295)
T 1yb4_A 4 MKLGFIGLGI----------MGSPMAINLARAGHQLHVTT-IGPVADELLS----------------------LGAVNVE 50 (295)
T ss_dssp CEEEECCCST----------THHHHHHHHHHTTCEEEECC-SSCCCHHHHT----------------------TTCBCCS
T ss_pred CEEEEEccCH----------HHHHHHHHHHhCCCEEEEEc-CHHHHHHHHH----------------------cCCcccC
Confidence 4899999754 77899999999999999999 5433221111 1244567
Q ss_pred CHHhhcccccEEEEEecCcc-cccccH--HHHHHhcCCCCEEEEcCCCC
Q 011641 405 DAYEATKDAHGVCILTEWDE-FKTLDY--QRIYDNMQKPAFVFDGRNVV 450 (480)
Q Consensus 405 ~~~~a~~~ad~vvi~t~~~~-~~~~~~--~~~~~~~~~~~~viD~~~~~ 450 (480)
++.++++++|+|+++++.+. .+..-. +.+...+++..+|+|..+..
T Consensus 51 ~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~~ 99 (295)
T 1yb4_A 51 TARQVTEFADIIFIMVPDTPQVEDVLFGEHGCAKTSLQGKTIVDMSSIS 99 (295)
T ss_dssp SHHHHHHTCSEEEECCSSHHHHHHHHHSTTSSTTSCCTTEEEEECSCCC
T ss_pred CHHHHHhcCCEEEEECCCHHHHHHHHhCchhHhhcCCCCCEEEECCCCC
Confidence 88899999999999997764 222100 02223455556899998874
No 469
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.10 E-value=0.085 Score=45.59 Aligned_cols=108 Identities=12% Similarity=-0.004 Sum_probs=66.5
Q ss_pred cCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHH-hhhccccCCCCCCCCCCCCcccccc
Q 011641 321 TVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQR-DLTMNKFDWDHPLHLQPMSPTMVKQ 399 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
...+.+|+|+|... -+..+++.|.+.|++|.++|+.....+... .. +
T Consensus 16 ~~~~~~v~IiG~G~----------iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~----------------------g 63 (155)
T 2g1u_A 16 KQKSKYIVIFGCGR----------LGSLIANLASSSGHSVVVVDKNEYAFHRLNSEF----------------------S 63 (155)
T ss_dssp -CCCCEEEEECCSH----------HHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTC----------------------C
T ss_pred ccCCCcEEEECCCH----------HHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcC----------------------C
Confidence 45678999999754 678999999999999999998543211100 00 1
Q ss_pred eE-Eec------CHHhh-cccccEEEEEecCcccccccHHHHHHh-cCCCCEEEEcCCCCChhhhhhcCcE
Q 011641 400 VS-VVW------DAYEA-TKDAHGVCILTEWDEFKTLDYQRIYDN-MQKPAFVFDGRNVVDANKLREIGFI 461 (480)
Q Consensus 400 ~~-~~~------~~~~a-~~~ad~vvi~t~~~~~~~~~~~~~~~~-~~~~~~viD~~~~~~~~~~~~~g~~ 461 (480)
.. +.. .+.++ ++++|+|+++|+.++.... ...+... .+...+|....+.-..+.+++.|..
T Consensus 64 ~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~~~~~~-~~~~~~~~~~~~~iv~~~~~~~~~~~l~~~G~~ 133 (155)
T 2g1u_A 64 GFTVVGDAAEFETLKECGMEKADMVFAFTNDDSTNFF-ISMNARYMFNVENVIARVYDPEKIKIFEENGIK 133 (155)
T ss_dssp SEEEESCTTSHHHHHTTTGGGCSEEEECSSCHHHHHH-HHHHHHHTSCCSEEEEECSSGGGHHHHHTTTCE
T ss_pred CcEEEecCCCHHHHHHcCcccCCEEEEEeCCcHHHHH-HHHHHHHHCCCCeEEEEECCHHHHHHHHHCCCc
Confidence 11 111 12333 6789999999998764332 2233333 3334467777666666666666654
No 470
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=95.08 E-value=0.043 Score=50.50 Aligned_cols=94 Identities=15% Similarity=0.167 Sum_probs=65.5
Q ss_pred CCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceEEe
Q 011641 324 NKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVSVV 403 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (480)
..+|+|+|... -+..+++.|.+.|.+|.++|..... . ..+. ..++...
T Consensus 28 ~~~I~iiG~G~----------~G~~la~~l~~~g~~V~~~~r~~~~--~-~~~~-------------------~~g~~~~ 75 (215)
T 2vns_A 28 APKVGILGSGD----------FARSLATRLVGSGFKVVVGSRNPKR--T-ARLF-------------------PSAAQVT 75 (215)
T ss_dssp -CCEEEECCSH----------HHHHHHHHHHHTTCCEEEEESSHHH--H-HHHS-------------------BTTSEEE
T ss_pred CCEEEEEccCH----------HHHHHHHHHHHCCCEEEEEeCCHHH--H-HHHH-------------------HcCCcee
Confidence 46899999754 6788999999999999999985332 2 1111 0124444
Q ss_pred cCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCCCChh
Q 011641 404 WDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNVVDAN 453 (480)
Q Consensus 404 ~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~~~~~ 453 (480)
+..++++++|+|++++....++++- + +....+ ..+|+|..+.+...
T Consensus 76 -~~~~~~~~~DvVi~av~~~~~~~v~-~-l~~~~~-~~~vv~~s~g~~~~ 121 (215)
T 2vns_A 76 -FQEEAVSSPEVIFVAVFREHYSSLC-S-LSDQLA-GKILVDVSNPTEQE 121 (215)
T ss_dssp -EHHHHTTSCSEEEECSCGGGSGGGG-G-GHHHHT-TCEEEECCCCCHHH
T ss_pred -cHHHHHhCCCEEEECCChHHHHHHH-H-HHHhcC-CCEEEEeCCCcccc
Confidence 6788899999999999976655532 2 433343 45999999988654
No 471
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=94.03 E-value=0.004 Score=57.07 Aligned_cols=93 Identities=11% Similarity=0.080 Sum_probs=63.9
Q ss_pred CCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceE
Q 011641 322 VSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVS 401 (480)
Q Consensus 322 ~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (480)
..+.+|+|+|+. +.+..+++.|.+.|.+|.+||+....+... ..++.
T Consensus 17 ~~~~~I~iIG~G----------~mG~~la~~L~~~G~~V~~~~r~~~~~~~~-----------------------~~g~~ 63 (201)
T 2yjz_A 17 EKQGVVCIFGTG----------DFGKSLGLKMLQCGYSVVFGSRNPQVSSLL-----------------------PRGAE 63 (201)
Confidence 356689999974 466788899999999999999864311110 01233
Q ss_pred EecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCCCC
Q 011641 402 VVWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNVVD 451 (480)
Q Consensus 402 ~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~~~ 451 (480)
.. ++.++++++|+|+++++.+..+++- .+.. +.+..+|||..+-+.
T Consensus 64 ~~-~~~~~~~~aDvVilav~~~~~~~v~--~l~~-~~~~~ivI~~~~G~~ 109 (201)
T 2yjz_A 64 VL-CYSEAASRSDVIVLAVHREHYDFLA--ELAD-SLKGRVLIDVSNNQK 109 (201)
Confidence 33 6778889999999999987766542 3333 223458999988774
No 472
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=95.01 E-value=0.13 Score=49.32 Aligned_cols=82 Identities=15% Similarity=0.100 Sum_probs=62.1
Q ss_pred HHHhcCcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCc
Q 011641 315 VASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSP 394 (480)
Q Consensus 315 ~~~l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (480)
++..+..+++++|.|+|.+- .-..+++..|.+.|++|.+.+-..
T Consensus 151 L~~~~i~l~Gk~vvVvGrs~---------iVG~p~A~lL~~~gAtVtv~h~~t--------------------------- 194 (285)
T 3p2o_A 151 LKAYEIDLEGKDAVIIGASN---------IVGRPMATMLLNAGATVSVCHIKT--------------------------- 194 (285)
T ss_dssp HHHTTCCCTTCEEEEECCCT---------TTHHHHHHHHHHTTCEEEEECTTC---------------------------
T ss_pred HHHhCCCCCCCEEEEECCCc---------hHHHHHHHHHHHCCCeEEEEeCCc---------------------------
Confidence 33444578999999999521 347899999999999999976321
Q ss_pred ccccceEEecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcC
Q 011641 395 TMVKQVSVVWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGR 447 (480)
Q Consensus 395 ~~~~~~~~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~ 447 (480)
.++.+.++.||.||.+|..+.|-.-+ .+++..+|||.-
T Consensus 195 ---------~~L~~~~~~ADIVI~Avg~p~~I~~~------~vk~GavVIDVg 232 (285)
T 3p2o_A 195 ---------KDLSLYTRQADLIIVAAGCVNLLRSD------MVKEGVIVVDVG 232 (285)
T ss_dssp ---------SCHHHHHTTCSEEEECSSCTTCBCGG------GSCTTEEEEECC
T ss_pred ---------hhHHHHhhcCCEEEECCCCCCcCCHH------HcCCCeEEEEec
Confidence 35678899999999999999874322 346667999985
No 473
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=95.01 E-value=0.019 Score=56.45 Aligned_cols=34 Identities=18% Similarity=0.143 Sum_probs=30.7
Q ss_pred CcEEEEEC-CChhHHHHHHHHHHcCCCCeEEEEECCH
Q 011641 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISV 36 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~ 36 (480)
+|+|.|.| .|++|..++..|.++ |++|+++++++
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~ 59 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKL--NQVVIGLDNFS 59 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCC
Confidence 37899999 599999999999998 99999999953
No 474
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=95.01 E-value=0.015 Score=58.15 Aligned_cols=30 Identities=13% Similarity=0.437 Sum_probs=24.3
Q ss_pred cEEEEEC-CChhHHHHHHHHHHcCCCC---eEEEEE
Q 011641 2 VKICCIG-AGYVGGPTMAVIALKCPSI---EVAVVD 33 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~---~V~~~D 33 (480)
|||+||| .|++|.-+...|.++ +| ++..+.
T Consensus 3 ~kVaIvGATG~vG~eLlrlL~~~--~~p~~el~~~a 36 (366)
T 3pwk_A 3 YTVAVVGATGAVGAQMIKMLEES--TLPIDKIRYLA 36 (366)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTC--CCCEEEEEEEE
T ss_pred cEEEEECCCChHHHHHHHHHhcC--CCCcEEEEEEE
Confidence 7999999 799999999999986 44 445554
No 475
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=95.01 E-value=0.075 Score=52.43 Aligned_cols=42 Identities=21% Similarity=0.378 Sum_probs=31.1
Q ss_pred cEEEEECCChhHHHHHHHHHHcC-CCCeEEEE-EC-CHHHHHHHH
Q 011641 2 VKICCIGAGYVGGPTMAVIALKC-PSIEVAVV-DI-SVSRINAWN 43 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~-~G~~V~~~-D~-~~~~v~~l~ 43 (480)
+||||+|.|++|.-+...|.++. |.++|..+ |+ +++....+-
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll 45 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLL 45 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhc
Confidence 58999999999999999988752 46887755 43 555554443
No 476
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=95.01 E-value=0.12 Score=51.14 Aligned_cols=41 Identities=15% Similarity=0.317 Sum_probs=31.0
Q ss_pred cEEEEECCChhHHHHHHHHHH---cCCCCeEEEEE-C-CHHHHHHHH
Q 011641 2 VKICCIGAGYVGGPTMAVIAL---KCPSIEVAVVD-I-SVSRINAWN 43 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~---~~~G~~V~~~D-~-~~~~v~~l~ 43 (480)
+||+|+|.|++|..+...|.+ + |..+|.++. + +++....+-
T Consensus 3 ikVgI~G~G~iGr~l~r~l~~~~~~-~~~eivai~~~~~~~~~~~ll 48 (339)
T 2x5j_O 3 VRVAINGFGRIGRNVVRALYESGRR-AEITVVAINELADAAGMAHLL 48 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSGG-GTEEEEEEECSSCHHHHHHHH
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCC-CCEEEEEEeCCCCHHHHHHHh
Confidence 699999999999999999887 5 467776654 3 555555544
No 477
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.99 E-value=0.1 Score=50.45 Aligned_cols=120 Identities=9% Similarity=0.058 Sum_probs=69.8
Q ss_pred CeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHh--------hhccccCCCC-CCCCCCCCcc
Q 011641 325 KKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRD--------LTMNKFDWDH-PLHLQPMSPT 395 (480)
Q Consensus 325 ~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~--------~~~~~~~~~~-~~~~~~~~~~ 395 (480)
++|+|+|+.. ....|+..|.+.|++|.+||+.-...+.... +...+.-... |.+. ....
T Consensus 16 ~~I~VIG~G~----------mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~--~~~~ 83 (302)
T 1f0y_A 16 KHVTVIGGGL----------MGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDE--FVEK 83 (302)
T ss_dssp CEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHH--HHHH
T ss_pred CEEEEECCCH----------HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchh--hHHH
Confidence 5899999854 7789999999999999999986432211000 0000000000 0000 0000
Q ss_pred cccceEEecCHHhhcccccEEEEEecCcc-cccccHHHHHHhcCCCCEEEEcCCCCChhhhh
Q 011641 396 MVKQVSVVWDAYEATKDAHGVCILTEWDE-FKTLDYQRIYDNMQKPAFVFDGRNVVDANKLR 456 (480)
Q Consensus 396 ~~~~~~~~~~~~~a~~~ad~vvi~t~~~~-~~~~~~~~~~~~~~~~~~viD~~~~~~~~~~~ 456 (480)
...+++..+++.++++++|.||+++.-+. .+.--++++...+++..+|+...+-+....+.
T Consensus 84 ~~~~i~~~~~~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~~l~ 145 (302)
T 1f0y_A 84 TLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIA 145 (302)
T ss_dssp HHHTEEEESCHHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHHHHH
T ss_pred HHhceEEecCHHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHH
Confidence 11347778889889999999999986542 12112334555555555777776666655553
No 478
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=94.98 E-value=0.0075 Score=60.06 Aligned_cols=41 Identities=22% Similarity=0.334 Sum_probs=34.5
Q ss_pred CcEEEEEC-CChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHH
Q 011641 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAW 42 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l 42 (480)
||+|.|.| .|++|..++..|.++ +|++|++++++++..+.+
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~~~ 65 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILET-TDWEVFGMDMQTDRLGDL 65 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHH-SSCEEEEEESCCTTTGGG
T ss_pred CCEEEEECCCChHHHHHHHHHHhC-CCCEEEEEeCChhhhhhh
Confidence 57899999 699999999999875 379999999987655444
No 479
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=94.95 E-value=0.012 Score=58.94 Aligned_cols=35 Identities=20% Similarity=0.249 Sum_probs=32.0
Q ss_pred CcEEEEECC-ChhHHHHHHHHHHcCCCCeEEEEECCHH
Q 011641 1 MVKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVS 37 (480)
Q Consensus 1 ~mkI~VIGl-G~~G~~lA~~La~~~~G~~V~~~D~~~~ 37 (480)
||+|.|.|. |.+|..++..|+++ |++|+++++++.
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~ 64 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHE--GHYVIASDWKKN 64 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCC
T ss_pred CCeEEEECCccHHHHHHHHHHHHC--CCeEEEEECCCc
Confidence 589999997 99999999999998 999999999764
No 480
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=94.91 E-value=0.018 Score=57.91 Aligned_cols=30 Identities=23% Similarity=0.461 Sum_probs=25.0
Q ss_pred cEEEEEC-CChhHHHHHHHHHHcCCCCeEEEE
Q 011641 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVV 32 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~~V~~~ 32 (480)
+||+||| .||+|.-+...|.++ |..++..+
T Consensus 20 ~kVaIvGAtG~vG~ell~lL~~h-p~~el~~l 50 (381)
T 3hsk_A 20 KKAGVLGATGSVGQRFILLLSKH-PEFEIHAL 50 (381)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTC-SSEEEEEE
T ss_pred cEEEEECCCChHHHHHHHHHHcC-CCceEEEe
Confidence 5899999 699999999999886 56777544
No 481
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=94.89 E-value=0.26 Score=42.79 Aligned_cols=113 Identities=13% Similarity=0.173 Sum_probs=65.8
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHhh----c
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV----S 77 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~----~ 77 (480)
++|.-||+|. |. ++..+++..++.+|+++|++++.++..++... ..++ ..++.+..|..+.+ .
T Consensus 27 ~~vldiG~G~-G~-~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~---~~~~--------~~~~~~~~d~~~~~~~~~~ 93 (178)
T 3hm2_A 27 ETLWDIGGGS-GS-IAIEWLRSTPQTTAVCFEISEERRERILSNAI---NLGV--------SDRIAVQQGAPRAFDDVPD 93 (178)
T ss_dssp EEEEEESTTT-TH-HHHHHHTTSSSEEEEEECSCHHHHHHHHHHHH---TTTC--------TTSEEEECCTTGGGGGCCS
T ss_pred CeEEEeCCCC-CH-HHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHH---HhCC--------CCCEEEecchHhhhhccCC
Confidence 4788999997 43 45556655457899999999998877664200 0010 01233333332222 4
Q ss_pred cCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEecCCCcchHHHHHHHHHhc
Q 011641 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (480)
Q Consensus 78 ~aDvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~STv~~gt~~~l~~~l~~~ 144 (480)
..|+|++.-+... ...++.+...++++..++.. +........+.+.+++.
T Consensus 94 ~~D~i~~~~~~~~----------------~~~l~~~~~~L~~gG~l~~~-~~~~~~~~~~~~~~~~~ 143 (178)
T 3hm2_A 94 NPDVIFIGGGLTA----------------PGVFAAAWKRLPVGGRLVAN-AVTVESEQMLWALRKQF 143 (178)
T ss_dssp CCSEEEECC-TTC----------------TTHHHHHHHTCCTTCEEEEE-ECSHHHHHHHHHHHHHH
T ss_pred CCCEEEECCcccH----------------HHHHHHHHHhcCCCCEEEEE-eeccccHHHHHHHHHHc
Confidence 5899986643210 34677788889887766543 33344445555666554
No 482
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=94.81 E-value=0.039 Score=54.77 Aligned_cols=93 Identities=11% Similarity=0.080 Sum_probs=65.2
Q ss_pred CCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceEEe
Q 011641 324 NKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVSVV 403 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (480)
..+|+|+|+. ...-.++..|.+.|.+|.+||+.....+...++ ++..+
T Consensus 8 ~~kIgIIG~G----------~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~----------------------G~~~~ 55 (341)
T 3ktd_A 8 SRPVCILGLG----------LIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDE----------------------GFDVS 55 (341)
T ss_dssp SSCEEEECCS----------HHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHT----------------------TCCEE
T ss_pred CCEEEEEeec----------HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----------------------CCeee
Confidence 4689999974 477889999999999999999865433322222 23456
Q ss_pred cCHHhhccc----ccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCCC
Q 011641 404 WDAYEATKD----AHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNVV 450 (480)
Q Consensus 404 ~~~~~a~~~----ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~~ 450 (480)
.++.+++++ +|.|+++++-....++ .+++... ++..+|+|..++-
T Consensus 56 ~~~~e~~~~a~~~aDlVilavP~~~~~~v-l~~l~~~-~~~~iv~Dv~Svk 104 (341)
T 3ktd_A 56 ADLEATLQRAAAEDALIVLAVPMTAIDSL-LDAVHTH-APNNGFTDVVSVK 104 (341)
T ss_dssp SCHHHHHHHHHHTTCEEEECSCHHHHHHH-HHHHHHH-CTTCCEEECCSCS
T ss_pred CCHHHHHHhcccCCCEEEEeCCHHHHHHH-HHHHHcc-CCCCEEEEcCCCC
Confidence 778877765 6999999996554432 2455554 5556899997764
No 483
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=94.81 E-value=0.02 Score=56.34 Aligned_cols=34 Identities=26% Similarity=0.372 Sum_probs=31.5
Q ss_pred CcEEEEECCChhHHHHHHHHHH---cCCCCeEEEEECCH
Q 011641 1 MVKICCIGAGYVGGPTMAVIAL---KCPSIEVAVVDISV 36 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~---~~~G~~V~~~D~~~ 36 (480)
|++|+|||.|..|+.+|..|++ . |++|+++|.+.
T Consensus 1 m~dV~IIGaG~aGl~~A~~L~~~~~~--G~~V~v~Ek~~ 37 (342)
T 3qj4_A 1 MAQVLIVGAGMTGSLCAALLRRQTSG--PLYLAVWDKAD 37 (342)
T ss_dssp CEEEEEECCSHHHHHHHHHHHSCC-C--CEEEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHHhhccC--CceEEEEECCC
Confidence 6789999999999999999999 7 99999999864
No 484
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=94.80 E-value=0.017 Score=59.91 Aligned_cols=35 Identities=23% Similarity=0.273 Sum_probs=31.6
Q ss_pred CcEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHH
Q 011641 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVS 37 (480)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~ 37 (480)
|++|.|||.|.-|++.|..|+++ |++|++++.+..
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~--G~~V~VlEa~~~ 35 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAA--GIPVLLLEQRDK 35 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHT--TCCEEEECCC--
T ss_pred CCCEEEECCcHHHHHHHHHHHHC--CCcEEEEccCCC
Confidence 78999999999999999999998 999999998653
No 485
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=94.70 E-value=0.26 Score=51.27 Aligned_cols=92 Identities=17% Similarity=0.127 Sum_probs=67.4
Q ss_pred cCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccce
Q 011641 321 TVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+.+++|+|+|+.- -...+++.|...|++|.++|+.....+....+ +.
T Consensus 271 ~l~GktV~IiG~G~----------IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~----------------------Ga 318 (494)
T 3ce6_A 271 LIGGKKVLICGYGD----------VGKGCAEAMKGQGARVSVTEIDPINALQAMME----------------------GF 318 (494)
T ss_dssp CCTTCEEEEECCSH----------HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT----------------------TC
T ss_pred CCCcCEEEEEccCH----------HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----------------------CC
Confidence 46889999999743 67889999999999999999975443222222 22
Q ss_pred EEecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCC
Q 011641 401 SVVWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRN 448 (480)
Q Consensus 401 ~~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~ 448 (480)
.+ .+++++++++|+|+.+|.-+.. ++ .+..+.|++.++|++.-.
T Consensus 319 ~~-~~l~e~l~~aDvVi~atgt~~~--i~-~~~l~~mk~ggilvnvG~ 362 (494)
T 3ce6_A 319 DV-VTVEEAIGDADIVVTATGNKDI--IM-LEHIKAMKDHAILGNIGH 362 (494)
T ss_dssp EE-CCHHHHGGGCSEEEECSSSSCS--BC-HHHHHHSCTTCEEEECSS
T ss_pred EE-ecHHHHHhCCCEEEECCCCHHH--HH-HHHHHhcCCCcEEEEeCC
Confidence 32 3677889999999999876653 33 245677887778998765
No 486
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.70 E-value=0.11 Score=52.44 Aligned_cols=129 Identities=13% Similarity=-0.016 Sum_probs=76.4
Q ss_pred CCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCC-CCCCCCCCcccccce
Q 011641 322 VSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDH-PLHLQPMSPTMVKQV 400 (480)
Q Consensus 322 ~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 400 (480)
+.+.||+|+|.. .-.+..++.|...|++|.+||+.....+....++ ..+.. +....+ .+ ...-
T Consensus 188 v~~~kV~ViG~G----------~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G---~~~~~~~~~~~~--d~-~~~~ 251 (405)
T 4dio_A 188 VPAAKIFVMGAG----------VAGLQAIATARRLGAVVSATDVRPAAKEQVASLG---AKFIAVEDEEFK--AA-ETAG 251 (405)
T ss_dssp ECCCEEEEECCS----------HHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTT---CEECCCCC-------------
T ss_pred cCCCEEEEECCc----------HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcC---Cceeeccccccc--cc-cccc
Confidence 467899999974 4789999999999999999999887644333332 10000 000000 00 0000
Q ss_pred EE------------ecCHHhhcccccEEEEEecCcccc--cccHHHHHHhcCCCCEEEEcC----CCCCh----hhhhhc
Q 011641 401 SV------------VWDAYEATKDAHGVCILTEWDEFK--TLDYQRIYDNMQKPAFVFDGR----NVVDA----NKLREI 458 (480)
Q Consensus 401 ~~------------~~~~~~a~~~ad~vvi~t~~~~~~--~~~~~~~~~~~~~~~~viD~~----~~~~~----~~~~~~ 458 (480)
.| ..++.++++++|+||-..-.|.=+ .+=-++..+.|++..+|||.. +.++- +.....
T Consensus 252 ~ya~e~s~~~~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t~~~~~~~~~ 331 (405)
T 4dio_A 252 GYAKEMSGEYQVKQAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGAEAGKVTEVG 331 (405)
T ss_dssp -------CHHHHHHHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTCCTTEEEEET
T ss_pred chhhhcchhhhhhhHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCccccCCCCeEEEC
Confidence 01 136788899999998764333211 111256778899888999986 34432 112345
Q ss_pred CcEEEEec
Q 011641 459 GFIVYSIG 466 (480)
Q Consensus 459 g~~y~~iG 466 (480)
|+.++|+-
T Consensus 332 GV~~~gv~ 339 (405)
T 4dio_A 332 GVRIVGHL 339 (405)
T ss_dssp TEEEEECS
T ss_pred CEEEEEeC
Confidence 77777763
No 487
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=94.69 E-value=0.21 Score=47.96 Aligned_cols=89 Identities=18% Similarity=0.116 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHhcCcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCC
Q 011641 307 KSRFVNRVVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHP 386 (480)
Q Consensus 307 ~~~~~~~~~~~l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~ 386 (480)
|.-+++ +++..+..+++++|.|+|.+ +.-...++..|.+.|++|.+.+-.
T Consensus 145 p~gv~~-lL~~~~i~l~Gk~vvVIG~s---------~iVG~p~A~lL~~~gAtVtv~hs~-------------------- 194 (285)
T 3l07_A 145 PKGIMT-MLREYGIKTEGAYAVVVGAS---------NVVGKPVSQLLLNAKATVTTCHRF-------------------- 194 (285)
T ss_dssp HHHHHH-HHHHTTCCCTTCEEEEECCC---------TTTHHHHHHHHHHTTCEEEEECTT--------------------
T ss_pred HHHHHH-HHHHhCCCCCCCEEEEECCC---------chhHHHHHHHHHHCCCeEEEEeCC--------------------
Confidence 334444 34445557899999999952 135789999999999999997532
Q ss_pred CCCCCCCcccccceEEecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcC
Q 011641 387 LHLQPMSPTMVKQVSVVWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGR 447 (480)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~ 447 (480)
..++.+.++.||.||.+|..+.|-.-+ .+++..+|||.-
T Consensus 195 ----------------t~~L~~~~~~ADIVI~Avg~p~~I~~~------~vk~GavVIDvg 233 (285)
T 3l07_A 195 ----------------TTDLKSHTTKADILIVAVGKPNFITAD------MVKEGAVVIDVG 233 (285)
T ss_dssp ----------------CSSHHHHHTTCSEEEECCCCTTCBCGG------GSCTTCEEEECC
T ss_pred ----------------chhHHHhcccCCEEEECCCCCCCCCHH------HcCCCcEEEEec
Confidence 125678899999999999998874322 345667999985
No 488
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=94.63 E-value=0.066 Score=51.28 Aligned_cols=109 Identities=20% Similarity=0.164 Sum_probs=71.7
Q ss_pred cCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccce
Q 011641 321 TVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQV 400 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (480)
.+++++|+|+|.. ..+..++..|.+.|++|.++|...... +.+. ..-++
T Consensus 126 ~~~~~~v~iiGaG----------~~g~aia~~L~~~g~~V~v~~r~~~~~---~~l~------------------~~~g~ 174 (275)
T 2hk9_A 126 EVKEKSILVLGAG----------GASRAVIYALVKEGAKVFLWNRTKEKA---IKLA------------------QKFPL 174 (275)
T ss_dssp TGGGSEEEEECCS----------HHHHHHHHHHHHHTCEEEEECSSHHHH---HHHT------------------TTSCE
T ss_pred CcCCCEEEEECch----------HHHHHHHHHHHHcCCEEEEEECCHHHH---HHHH------------------HHcCC
Confidence 4567899999963 477889999999999999999864321 1111 00124
Q ss_pred EEecCHHhhcccccEEEEEecCcccccccHHHH-HHhcCCCCEEEEcCCCCChh---hhhhcCcEE
Q 011641 401 SVVWDAYEATKDAHGVCILTEWDEFKTLDYQRI-YDNMQKPAFVFDGRNVVDAN---KLREIGFIV 462 (480)
Q Consensus 401 ~~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~-~~~~~~~~~viD~~~~~~~~---~~~~~g~~y 462 (480)
...+++.++++++|+||++|+-..+.+... .+ .+.+++..+|+|.-. .... ..++.|.++
T Consensus 175 ~~~~~~~~~~~~aDiVi~atp~~~~~~~~~-~i~~~~l~~g~~viDv~~-~~t~ll~~a~~~g~~~ 238 (275)
T 2hk9_A 175 EVVNSPEEVIDKVQVIVNTTSVGLKDEDPE-IFNYDLIKKDHVVVDIIY-KETKLLKKAKEKGAKL 238 (275)
T ss_dssp EECSCGGGTGGGCSEEEECSSTTSSTTCCC-SSCGGGCCTTSEEEESSS-SCCHHHHHHHHTTCEE
T ss_pred eeehhHHhhhcCCCEEEEeCCCCCCCCCCC-CCCHHHcCCCCEEEEcCC-ChHHHHHHHHHCcCEE
Confidence 455577888999999999998876532110 01 234555569999988 4322 234457665
No 489
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=94.63 E-value=0.097 Score=44.79 Aligned_cols=108 Identities=16% Similarity=0.133 Sum_probs=73.0
Q ss_pred CCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceEE
Q 011641 323 SNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVSV 402 (480)
Q Consensus 323 ~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (480)
+.++|+|+|++-++ ++.+..+++.|.+.|++|.--+|....+++ .++..
T Consensus 12 ~p~~vaVvGas~~~------g~~G~~~~~~l~~~G~~v~~vnp~~~~~~i-------------------------~G~~~ 60 (140)
T 1iuk_A 12 QAKTIAVLGAHKDP------SRPAHYVPRYLREQGYRVLPVNPRFQGEEL-------------------------FGEEA 60 (140)
T ss_dssp HCCEEEEETCCSST------TSHHHHHHHHHHHTTCEEEEECGGGTTSEE-------------------------TTEEC
T ss_pred CCCEEEEECCCCCC------CChHHHHHHHHHHCCCEEEEeCCCcccCcC-------------------------CCEEe
Confidence 36799999998877 578899999999999997777775211111 24556
Q ss_pred ecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCCCChh---hhhhcCcEEEE
Q 011641 403 VWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNVVDAN---KLREIGFIVYS 464 (480)
Q Consensus 403 ~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~~~~~---~~~~~g~~y~~ 464 (480)
..++.+.-+..|.++|.+.-+.-.+. .+++.+.- ...+++. .+....+ .+++.|+++.|
T Consensus 61 ~~sl~el~~~vDlavi~vp~~~~~~v-~~~~~~~g-i~~i~~~-~g~~~~~~~~~a~~~Gir~vg 122 (140)
T 1iuk_A 61 VASLLDLKEPVDILDVFRPPSALMDH-LPEVLALR-PGLVWLQ-SGIRHPEFEKALKEAGIPVVA 122 (140)
T ss_dssp BSSGGGCCSCCSEEEECSCHHHHTTT-HHHHHHHC-CSCEEEC-TTCCCHHHHHHHHHTTCCEEE
T ss_pred cCCHHHCCCCCCEEEEEeCHHHHHHH-HHHHHHcC-CCEEEEc-CCcCHHHHHHHHHHcCCEEEc
Confidence 67888877789999999887544332 33444443 3345554 4555543 34467898866
No 490
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=94.62 E-value=0.017 Score=53.61 Aligned_cols=35 Identities=14% Similarity=0.243 Sum_probs=31.5
Q ss_pred cEEEEEC-CChhHHHHHHHHHHcCCCC--eEEEEECCHHH
Q 011641 2 VKICCIG-AGYVGGPTMAVIALKCPSI--EVAVVDISVSR 38 (480)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~La~~~~G~--~V~~~D~~~~~ 38 (480)
|+|.|.| .|.+|..++..|+++ |+ +|++++++++.
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~--G~~~~V~~~~r~~~~ 56 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQ--GLFSKVTLIGRRKLT 56 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHH--TCCSEEEEEESSCCC
T ss_pred CeEEEECCCcHHHHHHHHHHHcC--CCCCEEEEEEcCCCC
Confidence 5799999 699999999999998 89 99999998653
No 491
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=94.55 E-value=0.095 Score=49.71 Aligned_cols=107 Identities=10% Similarity=0.000 Sum_probs=68.8
Q ss_pred cCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCCh-HHHHHhhhccccCCCCCCCCCCCCcccccc
Q 011641 321 TVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTE-DQIQRDLTMNKFDWDHPLHLQPMSPTMVKQ 399 (480)
Q Consensus 321 ~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (480)
.+++ +|+|+|..- .+..++..|.+.|++|.++|+.... +.+...++
T Consensus 114 ~l~~-~v~iiG~G~----------~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~---------------------- 160 (263)
T 2d5c_A 114 PLKG-PALVLGAGG----------AGRAVAFALREAGLEVWVWNRTPQRALALAEEFG---------------------- 160 (263)
T ss_dssp CCCS-CEEEECCSH----------HHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHT----------------------
T ss_pred CCCC-eEEEECCcH----------HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----------------------
Confidence 5678 999999743 6788999999999999999986543 22222221
Q ss_pred eEEecCHHhhcccccEEEEEecCcccccccHHHH-HHhcCCCCEEEEcCCCCCh----hhhhhcCcEEE
Q 011641 400 VSVVWDAYEATKDAHGVCILTEWDEFKTLDYQRI-YDNMQKPAFVFDGRNVVDA----NKLREIGFIVY 463 (480)
Q Consensus 400 ~~~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~-~~~~~~~~~viD~~~~~~~----~~~~~~g~~y~ 463 (480)
.. .+++.++ +++|+||++|+...+...+ ..+ .+.+++..+|+|.-..... +.+++.|.++.
T Consensus 161 ~~-~~~~~~~-~~~Divi~~tp~~~~~~~~-~~l~~~~l~~g~~viD~~~~p~~t~l~~~a~~~g~~~v 226 (263)
T 2d5c_A 161 LR-AVPLEKA-REARLLVNATRVGLEDPSA-SPLPAELFPEEGAAVDLVYRPLWTRFLREAKAKGLKVQ 226 (263)
T ss_dssp CE-ECCGGGG-GGCSEEEECSSTTTTCTTC-CSSCGGGSCSSSEEEESCCSSSSCHHHHHHHHTTCEEE
T ss_pred cc-hhhHhhc-cCCCEEEEccCCCCCCCCC-CCCCHHHcCCCCEEEEeecCCcccHHHHHHHHCcCEEE
Confidence 12 3467777 8999999999987543211 001 2445555689997654221 23345676653
No 492
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=94.54 E-value=0.025 Score=55.94 Aligned_cols=78 Identities=19% Similarity=0.209 Sum_probs=45.4
Q ss_pred cEEEEECCChhHHHHHHHHHHcCC-------CCeEE-EEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCE-EEec--
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCP-------SIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNL-FFST-- 70 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~-------G~~V~-~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l-~~t~-- 70 (480)
+||+|||+|.||..++..+.++ + +.+|. ++|+++++.+.. ..+++.......+.+ .+++
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~-~~~~~~g~~~~vvaV~d~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 76 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSF-NEENRLGLKFNVVFVADSLHSYYNER---------IDIGKVISYKEKGSLDSLEYES 76 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-HHHCSSSEEEEEEEEECSSCEEECTT---------CCHHHHHHHHHTTCGGGCCSEE
T ss_pred EeEEEEecCHHHHHHHHHHHhC-hHHHhcCCcEEEEEEEECChHHhhcc---------cChHHHhhhhccCCcccccCCC
Confidence 5799999999999999998764 1 24554 567776542210 001111100000112 1334
Q ss_pred -CHHHhh-ccCcEEEEeccCC
Q 011641 71 -DVEKHV-SEADIVFVSVNTP 89 (480)
Q Consensus 71 -d~~~a~-~~aDvVii~Vptp 89 (480)
|+++.+ .+.|+|++|+|+.
T Consensus 77 ~d~~~ll~~~iDvVv~~t~~~ 97 (331)
T 3c8m_A 77 ISASEALARDFDIVVDATPAS 97 (331)
T ss_dssp CCHHHHHHSSCSEEEECSCCC
T ss_pred CCHHHHhCCCCCEEEECCCCC
Confidence 777755 3689999998753
No 493
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.53 E-value=0.046 Score=46.68 Aligned_cols=90 Identities=10% Similarity=0.090 Sum_probs=63.2
Q ss_pred CCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHH-HHHhhhccccCCCCCCCCCCCCcccccceEE
Q 011641 324 NKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQ-IQRDLTMNKFDWDHPLHLQPMSPTMVKQVSV 402 (480)
Q Consensus 324 ~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (480)
+++|+|+|... -+..++..|.+.|++|.++|......+ +...++ ..+..
T Consensus 21 ~~~v~iiG~G~----------iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~--------------------~~~~~ 70 (144)
T 3oj0_A 21 GNKILLVGNGM----------LASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE--------------------YEYVL 70 (144)
T ss_dssp CCEEEEECCSH----------HHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT--------------------CEEEE
T ss_pred CCEEEEECCCH----------HHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC--------------------CceEe
Confidence 78999999643 678899999999999999998654322 222221 12334
Q ss_pred ecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCC
Q 011641 403 VWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRN 448 (480)
Q Consensus 403 ~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~ 448 (480)
.++++++++++|+||.+|+.+... ++. +.+++..+|+|.-.
T Consensus 71 ~~~~~~~~~~~Divi~at~~~~~~-~~~----~~l~~g~~vid~~~ 111 (144)
T 3oj0_A 71 INDIDSLIKNNDVIITATSSKTPI-VEE----RSLMPGKLFIDLGN 111 (144)
T ss_dssp CSCHHHHHHTCSEEEECSCCSSCS-BCG----GGCCTTCEEEECCS
T ss_pred ecCHHHHhcCCCEEEEeCCCCCcE-eeH----HHcCCCCEEEEccC
Confidence 568889999999999999976432 222 33455668999855
No 494
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=94.50 E-value=0.075 Score=50.25 Aligned_cols=33 Identities=21% Similarity=0.321 Sum_probs=29.5
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCC-eEEEEECCH
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISV 36 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~-~V~~~D~~~ 36 (480)
.+|.|||+|.+|..+|..|+.. |. +++++|.+.
T Consensus 29 ~~VlvvG~GglG~~va~~La~~--Gvg~i~lvD~d~ 62 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGA--GVGTLVLADDDD 62 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCSEEEEECCCB
T ss_pred CcEEEEccCHHHHHHHHHHHHc--CCCeEEEEeCCC
Confidence 4899999999999999999998 65 789999875
No 495
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=94.50 E-value=0.07 Score=51.70 Aligned_cols=81 Identities=16% Similarity=0.055 Sum_probs=62.0
Q ss_pred CCeEEEEe-eccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCCCCCCCCcccccceEE
Q 011641 324 NKKIAVLG-FAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTMVKQVSV 402 (480)
Q Consensus 324 ~~~v~ilG-la~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (480)
.++|+|+| +.. .+..++..|.+.|.+|.+||+...
T Consensus 21 ~~~I~iIGg~G~----------mG~~la~~l~~~G~~V~~~~~~~~---------------------------------- 56 (298)
T 2pv7_A 21 IHKIVIVGGYGK----------LGGLFARYLRASGYPISILDREDW---------------------------------- 56 (298)
T ss_dssp CCCEEEETTTSH----------HHHHHHHHHHTTTCCEEEECTTCG----------------------------------
T ss_pred CCEEEEEcCCCH----------HHHHHHHHHHhCCCeEEEEECCcc----------------------------------
Confidence 35899999 865 778999999999999999997431
Q ss_pred ecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCCCC
Q 011641 403 VWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNVV 450 (480)
Q Consensus 403 ~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~~~ 450 (480)
.+..++++++|+|+++++.+...++ .+++...+++..+|+|.-++-
T Consensus 57 -~~~~~~~~~aDvVilavp~~~~~~v-l~~l~~~l~~~~iv~~~~svk 102 (298)
T 2pv7_A 57 -AVAESILANADVVIVSVPINLTLET-IERLKPYLTENMLLADLTSVK 102 (298)
T ss_dssp -GGHHHHHTTCSEEEECSCGGGHHHH-HHHHGGGCCTTSEEEECCSCC
T ss_pred -cCHHHHhcCCCEEEEeCCHHHHHHH-HHHHHhhcCCCcEEEECCCCC
Confidence 1346778999999999998775542 245656666667999987653
No 496
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=94.49 E-value=0.025 Score=56.72 Aligned_cols=69 Identities=20% Similarity=0.248 Sum_probs=40.2
Q ss_pred CcEEEEEC-CChhHHHHHH-HHHHcCCCC---eEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEEecCHHHh
Q 011641 1 MVKICCIG-AGYVGGPTMA-VIALKCPSI---EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKH 75 (480)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~-~La~~~~G~---~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a 75 (480)
||||+|+| .|++|.-+.. .|.++ ++ +++.+..+. .|. ++. .+. . ..-.+.-..++++
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~--~~~~v~i~~~~~~s-------~G~-~v~--~~~---g--~~i~~~~~~~~~~- 62 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEER--DFDAIRPVFFSTSQ-------LGQ-AAP--SFG---G--TTGTLQDAFDLEA- 62 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT--GGGGSEEEEEESSS-------TTS-BCC--GGG---T--CCCBCEETTCHHH-
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcC--CCCeEEEEEEEeCC-------CCC-Ccc--ccC---C--CceEEEecCChHH-
Confidence 78999999 9999999999 55554 43 455554421 121 110 000 0 0001222234554
Q ss_pred hccCcEEEEecc
Q 011641 76 VSEADIVFVSVN 87 (480)
Q Consensus 76 ~~~aDvVii~Vp 87 (480)
++++|+||.|+|
T Consensus 63 ~~~~DvVf~a~g 74 (367)
T 1t4b_A 63 LKALDIIVTCQG 74 (367)
T ss_dssp HHTCSEEEECSC
T ss_pred hcCCCEEEECCC
Confidence 679999999976
No 497
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=94.48 E-value=0.22 Score=47.72 Aligned_cols=88 Identities=14% Similarity=0.062 Sum_probs=64.1
Q ss_pred HHHHHHHHHHhcCcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCC
Q 011641 308 SRFVNRVVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPL 387 (480)
Q Consensus 308 ~~~~~~~~~~l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~ 387 (480)
.-+++ +++..+-.+++++|.|+|-+- .-..+++..|.+.|++|.+.+-.
T Consensus 146 ~gv~~-lL~~~~i~l~Gk~vvVvGrs~---------iVG~plA~lL~~~gAtVtv~hs~--------------------- 194 (286)
T 4a5o_A 146 KGIMT-LLASTGADLYGMDAVVVGASN---------IVGRPMALELLLGGCTVTVTHRF--------------------- 194 (286)
T ss_dssp HHHHH-HHHHTTCCCTTCEEEEECTTS---------TTHHHHHHHHHHTTCEEEEECTT---------------------
T ss_pred HHHHH-HHHHhCCCCCCCEEEEECCCc---------hhHHHHHHHHHHCCCeEEEEeCC---------------------
Confidence 33434 344445578999999999521 35789999999999999997521
Q ss_pred CCCCCCcccccceEEecCHHhhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcC
Q 011641 388 HLQPMSPTMVKQVSVVWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGR 447 (480)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~ 447 (480)
..++.+.++.||.||.++..+.|-.-+ ..++..+|||.-
T Consensus 195 ---------------T~~L~~~~~~ADIVI~Avg~p~~I~~~------~vk~GavVIDvg 233 (286)
T 4a5o_A 195 ---------------TRDLADHVSRADLVVVAAGKPGLVKGE------WIKEGAIVIDVG 233 (286)
T ss_dssp ---------------CSCHHHHHHTCSEEEECCCCTTCBCGG------GSCTTCEEEECC
T ss_pred ---------------CcCHHHHhccCCEEEECCCCCCCCCHH------HcCCCeEEEEec
Confidence 125678899999999999998874332 335667999975
No 498
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=94.45 E-value=0.38 Score=46.54 Aligned_cols=97 Identities=13% Similarity=0.103 Sum_probs=60.7
Q ss_pred cEEEEECCChhHHHHHHHHHHcCCCCeEEEEECCHHHHHHHHcCCCCCcCCChHHHHhhhcCCCEEE-ecCHHHh-hccC
Q 011641 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFF-STDVEKH-VSEA 79 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~~G~~V~~~D~~~~~v~~l~~~~~~~~e~~l~~~~~~~~~~~l~~-t~d~~~a-~~~a 79 (480)
++|..||||..|.+. ..+++. +|.+|+++|++++.++..++. +....-.++++ ..|..+. -...
T Consensus 124 ~rVLDIGcG~G~~ta-~~lA~~-~ga~V~gIDis~~~l~~Ar~~------------~~~~gl~~v~~v~gDa~~l~d~~F 189 (298)
T 3fpf_A 124 ERAVFIGGGPLPLTG-ILLSHV-YGMRVNVVEIEPDIAELSRKV------------IEGLGVDGVNVITGDETVIDGLEF 189 (298)
T ss_dssp CEEEEECCCSSCHHH-HHHHHT-TCCEEEEEESSHHHHHHHHHH------------HHHHTCCSEEEEESCGGGGGGCCC
T ss_pred CEEEEECCCccHHHH-HHHHHc-cCCEEEEEECCHHHHHHHHHH------------HHhcCCCCeEEEECchhhCCCCCc
Confidence 579999999866542 334553 388999999999988876541 00000023443 2333321 2468
Q ss_pred cEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhCCCCcEEEEec
Q 011641 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKS 127 (480)
Q Consensus 80 DvVii~Vptp~~~~~~~~~~~~d~~~v~~~~~~i~~~l~~~~iVi~~S 127 (480)
|+|+++.-. +| ...+++.+.+.+++|..++...
T Consensus 190 DvV~~~a~~------------~d---~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 190 DVLMVAALA------------EP---KRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp SEEEECTTC------------SC---HHHHHHHHHHHCCTTCEEEEEE
T ss_pred CEEEECCCc------------cC---HHHHHHHHHHHcCCCcEEEEEc
Confidence 999986431 12 2577889999999988776543
No 499
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=94.45 E-value=0.19 Score=48.54 Aligned_cols=89 Identities=15% Similarity=0.093 Sum_probs=64.3
Q ss_pred HHHHHHHHHHhcCcCCCCeEEEEeeccCCCCCcccCChHHHHHHHHHhCCCEEEEEcCCCChHHHHHhhhccccCCCCCC
Q 011641 308 SRFVNRVVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPL 387 (480)
Q Consensus 308 ~~~~~~~~~~l~~~~~~~~v~ilGla~K~~~~d~r~Sp~~~l~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~~~ 387 (480)
.-+++ +++..+..+++++|.|+|.+- .-...++..|.+.|++|.+.+-...
T Consensus 150 ~gv~~-lL~~~~i~l~Gk~vvVIG~s~---------iVG~p~A~lL~~~gAtVtv~~~~T~------------------- 200 (300)
T 4a26_A 150 KGVIV-LLKRCGIEMAGKRAVVLGRSN---------IVGAPVAALLMKENATVTIVHSGTS------------------- 200 (300)
T ss_dssp HHHHH-HHHHHTCCCTTCEEEEECCCT---------TTHHHHHHHHHHTTCEEEEECTTSC-------------------
T ss_pred HHHHH-HHHHcCCCCCCCEEEEECCCc---------hHHHHHHHHHHHCCCeEEEEeCCCC-------------------
Confidence 33433 333445578999999999521 3578999999999999999864221
Q ss_pred CCCCCCcccccceEEecCHH--hhcccccEEEEEecCcccccccHHHHHHhcCCCCEEEEcCC
Q 011641 388 HLQPMSPTMVKQVSVVWDAY--EATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRN 448 (480)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~--~a~~~ad~vvi~t~~~~~~~~~~~~~~~~~~~~~~viD~~~ 448 (480)
++. +.+++||.||.+|..+.+-.-+ .+++..+|||.--
T Consensus 201 -----------------~l~l~~~~~~ADIVI~Avg~p~~I~~~------~vk~GavVIDvgi 240 (300)
T 4a26_A 201 -----------------TEDMIDYLRTADIVIAAMGQPGYVKGE------WIKEGAAVVDVGT 240 (300)
T ss_dssp -----------------HHHHHHHHHTCSEEEECSCCTTCBCGG------GSCTTCEEEECCC
T ss_pred -----------------CchhhhhhccCCEEEECCCCCCCCcHH------hcCCCcEEEEEec
Confidence 234 7789999999999999874433 2466679999853
No 500
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=94.40 E-value=0.05 Score=53.85 Aligned_cols=42 Identities=12% Similarity=0.193 Sum_probs=31.7
Q ss_pred cEEEEECCChhHHHHHHHHHHcC-CCCeEEEE-EC-CHHHHHHHH
Q 011641 2 VKICCIGAGYVGGPTMAVIALKC-PSIEVAVV-DI-SVSRINAWN 43 (480)
Q Consensus 2 mkI~VIGlG~~G~~lA~~La~~~-~G~~V~~~-D~-~~~~v~~l~ 43 (480)
+||||+|.|++|..+...|.++. ++++|.++ |+ +++....+.
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~ 47 (339)
T 3b1j_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLL 47 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHH
T ss_pred eEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHh
Confidence 69999999999999999988752 45787665 44 566655543
Done!