Your job contains 1 sequence.
>011646
MSSMMEWNGKTPLQWDWENLIMFNATAAENPRKTRQIEWEIDGDGGIDSTSFFSSGGGDG
SGGSISDMGLASLSKSSKSASNNSSSMGETKTSKFRLEASDDVLEDFDLKKEFAKAEPTG
GSPTLEASVGSGEPLLGLKLGKRMYFEDISAGGNGKNSSFPAVCGSYSTSAKRSRSNPQT
TQAALCQVEGCGLDLSSAKDYHRKHRVCENHSKSPKVIVGGLERRFCQQCSRFHGLSEFD
EKKRSCRRRLSDHNARRRKSQPEAVRLNPARLSSSLYDGKQQMTLVWNSVPFVHKNPTET
FTWEGTCVSKSTQTKGYASKSAKGEGTDVLLQLHGNQPPNSVPARRDDSNGLLLSKAKVT
MAEVLDQGPEESMISFDLGATQDCHSALSLLSKTSWGICEPKKVSQQHPTSTSLTNIPHA
VMPAMAQGSPFASSEYRQMGKLSTEFQVHASSFHQDEGNYSQEIQLFRAPYESDFYPTVD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011646
(480 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2169248 - symbol:SPL2 "squamosa promoter bindi... 670 7.4e-66 1
TAIR|locus:2016014 - symbol:SPL10 "squamosa promoter bind... 503 1.4e-56 2
TAIR|locus:2015999 - symbol:SPL11 "squamosa promoter-like... 496 1.8e-54 2
TAIR|locus:2059974 - symbol:SPL9 "squamosa promoter bindi... 390 3.5e-36 1
TAIR|locus:2026428 - symbol:AT1G69170 species:3702 "Arabi... 332 6.2e-33 2
TAIR|locus:2159717 - symbol:SPL13A "SQUAMOSA PROMOTER-BIN... 348 9.8e-32 1
TAIR|locus:2832472 - symbol:SPL13B "SQUAMOSA PROMOTER-BIN... 348 9.8e-32 1
TAIR|locus:504956101 - symbol:SPL8 "squamosa promoter bin... 308 6.8e-30 2
TAIR|locus:2095793 - symbol:SPL15 "squamosa promoter bind... 330 7.9e-30 1
TAIR|locus:2101402 - symbol:SPL12 "squamosa promoter-bind... 322 8.2e-28 1
TAIR|locus:2057656 - symbol:SPL3 "squamosa promoter bindi... 307 2.2e-27 1
TAIR|locus:2041329 - symbol:SPL1 "squamosa promoter bindi... 320 2.4e-27 1
TAIR|locus:2037355 - symbol:SPL14 "squamosa promoter bind... 308 1.2e-25 2
TAIR|locus:2011706 - symbol:AT1G76580 species:3702 "Arabi... 309 3.9e-25 1
TAIR|locus:2009675 - symbol:SPL4 "squamosa promoter bindi... 287 3.9e-25 1
TAIR|locus:2087105 - symbol:SPL5 "squamosa promoter bindi... 273 1.7e-23 1
>TAIR|locus:2169248 [details] [associations]
symbol:SPL2 "squamosa promoter binding protein-like 2"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0048510 "regulation of timing
of transition from vegetative to reproductive phase" evidence=IMP]
[GO:0048653 "anther development" evidence=IGI] InterPro:IPR004333
Pfam:PF03110 PROSITE:PS51141 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0048653 GO:GO:0048510 EMBL:AB017070
Gene3D:4.10.1100.10 SUPFAM:SSF103612 HOGENOM:HOG000070897
EMBL:AJ011624 EMBL:AJ011625 EMBL:AJ011626 EMBL:BT025984
EMBL:AK230160 IPI:IPI00531293 PIR:T52603 PIR:T52604
RefSeq:NP_199141.1 RefSeq:NP_851122.1 RefSeq:NP_974875.1
UniGene:At.47249 ProteinModelPortal:Q9S840 SMR:Q9S840 STRING:Q9S840
PRIDE:Q9S840 EnsemblPlants:AT5G43270.1 EnsemblPlants:AT5G43270.2
EnsemblPlants:AT5G43270.3 GeneID:834345 KEGG:ath:AT5G43270
GeneFarm:4763 TAIR:At5g43270 eggNOG:NOG246953 InParanoid:Q9S840
OMA:VERRFCQ PhylomeDB:Q9S840 ProtClustDB:CLSN2686808
Genevestigator:Q9S840 GermOnline:AT5G43270 Uniprot:Q9S840
Length = 419
Score = 670 (240.9 bits), Expect = 7.4e-66, P = 7.4e-66
Identities = 156/344 (45%), Positives = 178/344 (51%)
Query: 5 MEWNGKTPLQWDWENLIMFNATAAENPRKTRQIEWEXXXXXXXXXXXXXXXXXXXXXXXX 64
ME N K P QW+ ENLI F + AE PRK + +EWE
Sbjct: 1 MECNAKPPFQWELENLISFGTSTAEVPRKLKPMEWEIDGFDCTSLYSSSFAYAGSSGSDI 60
Query: 65 XXXMGXXXXXXXXXXXXXXXXXMGETKTSKFRLEASDDVLEDFDLKKEFAKAEPTGGSPT 124
E +T F E + L EFAK T SP+
Sbjct: 61 AHAFSKSSKSTSISSSSA------EVRTHNFTSETGES------LPGEFAKGIDT--SPS 106
Query: 125 LEASVGSGEPLLGLKLGKRMYFEDISAGGNGKNSSFPAVCGSYSTS-AKRSRSNPQTTQA 183
LE S GSG+P+LGLKLGKR YFED N K P S S S K+S+S PQ Q
Sbjct: 107 LELSFGSGDPVLGLKLGKRTYFEDFWEVENAKGLGLPVTLASSSVSPVKKSKSIPQRLQT 166
Query: 184 ALCQVEGCGLDLSSAKDYHRKHRVCENHSKSPKVIVGGLERRFCQQCSRFHGLSEFDEKK 243
CQVEGC LDLSSAKDYHRKHR+CENHSK PKV+V G+ERRFCQQCSRFH LSEFDEKK
Sbjct: 167 PHCQVEGCNLDLSSAKDYHRKHRICENHSKFPKVVVSGVERRFCQQCSRFHCLSEFDEKK 226
Query: 244 RSCRRRLSDHNARRRKSQPEAVRLNPARLSSSLYDGKQQMTLVWNSVPFVHKNPTETFTW 303
RSCRRRLSDHNARRRK P NP R YDGK Q+ VWN +H E F W
Sbjct: 227 RSCRRRLSDHNARRRK--P-----NPGRT----YDGKPQVDFVWNRFALIHPRSEEKFIW 275
Query: 304 EGTCVSKSTQTKGYASKSAKGEGTDVLLQLHGNQPPNSVPARRD 347
SK ++ + AK E +D G P + AR +
Sbjct: 276 PS---SKHVPSRVLMPQPAKTEISDTEHNRFGLLDPKTKTARAE 316
>TAIR|locus:2016014 [details] [associations]
symbol:SPL10 "squamosa promoter binding protein-like 10"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010358 "leaf shaping"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0048510 "regulation of timing of
transition from vegetative to reproductive phase" evidence=IMP]
InterPro:IPR004333 Pfam:PF03110 PROSITE:PS51141 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0046872
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048510
EMBL:AC004557 GO:GO:0010358 Gene3D:4.10.1100.10 SUPFAM:SSF103612
EMBL:AJ011636 EMBL:AJ011637 EMBL:AY074853 EMBL:AY142028
IPI:IPI00546520 PIR:T52596 RefSeq:NP_001031096.2
RefSeq:NP_001077605.1 RefSeq:NP_174057.2 RefSeq:NP_973921.1
UniGene:At.21970 ProteinModelPortal:Q8S9L0 SMR:Q8S9L0
EnsemblPlants:AT1G27370.1 EnsemblPlants:AT1G27370.2
EnsemblPlants:AT1G27370.3 EnsemblPlants:AT1G27370.4 GeneID:839626
KEGG:ath:AT1G27370 GeneFarm:4771 TAIR:At1g27370 eggNOG:NOG298579
HOGENOM:HOG000070897 InParanoid:Q8S9L0 OMA:STEWEFE PhylomeDB:Q8S9L0
ProtClustDB:CLSN2688014 Genevestigator:Q8S9L0 Uniprot:Q8S9L0
Length = 396
Score = 503 (182.1 bits), Expect = 1.4e-56, Sum P(2) = 1.4e-56
Identities = 126/287 (43%), Positives = 167/287 (58%)
Query: 112 EFAKAEPTGGSPTLEASVGSGEPLLGLKLGKRMYFEDISAGGNGKNSSFPAVCGSYSTSA 171
+F + +P S LE + S E L LKLGKR Y E+ N S+ + S A
Sbjct: 104 DFLQVKP---STALEVPIASAESDLCLKLGKRTYSEEFWGRNNNDLSAVSMNLLTPSVVA 160
Query: 172 -KRSRSNPQTTQAALCQVEGCGLDLSSAKDYHRKHRVCENHSKSPKVIVGGLERRFCQQC 230
K+++S Q+ Q CQ++GC LDLSS+KDYHRKHRVCE HSK PKV+V GLERRFCQQC
Sbjct: 161 RKKTKSCGQSMQVPRCQIDGCELDLSSSKDYHRKHRVCETHSKCPKVVVSGLERRFCQQC 220
Query: 231 SRFHGLSEFDEKKRSCRRRLSDHNARRRKSQPEAV-RLNPARLSSSLYDGKQQMTLVWNS 289
SRFH +SEFDEKKRSCR+RLS HNARRRK P+ V LN R+ +D +Q +++WN
Sbjct: 221 SRFHAVSEFDEKKRSCRKRLSHHNARRRK--PQGVFPLNSERV----FDRRQHTSMLWNG 274
Query: 290 VPFVHKNPTETFTWEGTCVSKSTQTK-GYASKSAKGEGTDVLLQLHGNQPPNSVPARRDD 348
+ ++ E +TW T +K TQ + G+ +G G++ L G+ S
Sbjct: 275 LS-LNTRSEEKYTWGTTYETKPTQMESGFTLSFQRGNGSEDQL-FTGSTLSFSA---FQT 329
Query: 349 SNGLLLSKAKVTMAEVLDQGPEESMISFDLGATQDCHSALSLLSKTS 395
S G K+ + + D+G E S L + D +SALSLLS TS
Sbjct: 330 SGGFSAGKSNIQLP---DKGVGEC--SGGLHESHDFYSALSLLSTTS 371
Score = 97 (39.2 bits), Expect = 1.4e-56, Sum P(2) = 1.4e-56
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 5 MEWNGKTPLQWDWENLIMFNATAAENPRKTRQIEWE 40
M+ N + WDWENLIM N + EN +K + EWE
Sbjct: 1 MDCNMVSSFPWDWENLIMSNQSKTENEKKQQSTEWE 36
>TAIR|locus:2015999 [details] [associations]
symbol:SPL11 "squamosa promoter-like 11" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0048510 "regulation of timing of
transition from vegetative to reproductive phase" evidence=IMP]
InterPro:IPR004333 Pfam:PF03110 PROSITE:PS51141 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048510 EMBL:AC004557
Gene3D:4.10.1100.10 SUPFAM:SSF103612 HOGENOM:HOG000070897
ProtClustDB:CLSN2688014 EMBL:AJ011634 EMBL:AJ011635 EMBL:AY070106
EMBL:AY091286 EMBL:AY088185 IPI:IPI00527344 PIR:B86399 PIR:T52598
RefSeq:NP_001077603.1 RefSeq:NP_001077604.1 RefSeq:NP_564280.1
RefSeq:NP_973920.1 UniGene:At.497 ProteinModelPortal:Q9FZK0
SMR:Q9FZK0 IntAct:Q9FZK0 STRING:Q9FZK0 EnsemblPlants:AT1G27360.1
EnsemblPlants:AT1G27360.2 EnsemblPlants:AT1G27360.3
EnsemblPlants:AT1G27360.4 GeneID:839625 KEGG:ath:AT1G27360
GeneFarm:4772 TAIR:At1g27360 eggNOG:NOG312846 InParanoid:Q9FZK0
OMA:RCKLASE PhylomeDB:Q9FZK0 Genevestigator:Q9FZK0
GermOnline:AT1G27360 Uniprot:Q9FZK0
Length = 393
Score = 496 (179.7 bits), Expect = 1.8e-54, Sum P(2) = 1.8e-54
Identities = 132/317 (41%), Positives = 172/317 (54%)
Query: 89 ETKTSKFRLEASD-DVLEDFDLKKEFAKAEPTGGSPTLEASVGSGEPLLGLKLGKRMYFE 147
E K K E+S D + D + KA PT LE SV S E L LKLGKR Y E
Sbjct: 84 EAKRCKLASESSPGDSCSNIDFVQ--VKA-PTA----LEVSVASAESDLCLKLGKRTYSE 136
Query: 148 DISAGGNGKNSSFPAVCGSYSTSAKRSRSNPQTTQAALCQVEGCGLDLSSAKDYHRKHRV 207
+ N + S+ + S A +S+ Q+ CQ++GC LDLSSAK YHRKH+V
Sbjct: 137 EYWGRNNNEISAVSMKLLTPSVVAGKSKLCGQSMPVPRCQIDGCELDLSSAKGYHRKHKV 196
Query: 208 CENHSKSPKVIVGGLERRFCQQCSRFHGLSEFDEKKRSCRRRLSDHNARRRKSQPEAV-R 266
CE HSK PKV V GLERRFCQQCSRFH +SEFDEKKRSCR+RLS HNARRRK P+ V
Sbjct: 197 CEKHSKCPKVSVSGLERRFCQQCSRFHAVSEFDEKKRSCRKRLSHHNARRRK--PQGVFS 254
Query: 267 LNPARLSSSLYDGKQQMTLVWNSVPFVHKNPTETFTW-EGTCVSKSTQT-KGYASKSAKG 324
+NP R+ YD +Q ++WN V ++ E + W T +K QT K + +G
Sbjct: 255 MNPERV----YDRRQHTNMLWNGVS-LNARSEEMYEWGNNTYDTKPRQTEKSFTLSFQRG 309
Query: 325 EGTDVLLQLHGNQPPNSVPARRDDSNGLLLSKAKVTMAEVLDQGPEESMISFDLGATQDC 384
G++ L ++ + + S G K+K + G + S L +QD
Sbjct: 310 NGSEDQLVASSSR----MFSTSQTSGGFPAGKSKFQL-----HGEDVGEYSGVLHESQDI 360
Query: 385 HSALSLLSKTSWGICEP 401
H ALSLLS +S + +P
Sbjct: 361 HRALSLLSTSSDPLAQP 377
Score = 84 (34.6 bits), Expect = 1.8e-54, Sum P(2) = 1.8e-54
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 5 MEWNGKTPLQWDWENLIMFNATAAENPRKTRQIEWE 40
M+ N + QWDWE+LIM N + E+ K EWE
Sbjct: 1 MDCNMVSSSQWDWEHLIMSNPSRTEDDSKQLPTEWE 36
>TAIR|locus:2059974 [details] [associations]
symbol:SPL9 "squamosa promoter binding protein-like 9"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=IGI]
[GO:0048366 "leaf development" evidence=IMP;IDA] [GO:2000025
"regulation of leaf formation" evidence=IMP] [GO:0048653 "anther
development" evidence=IGI] InterPro:IPR004333 Pfam:PF03110
PROSITE:PS51141 GO:GO:0005634 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC002561 GO:GO:0048653 GO:GO:0010228
GO:GO:0048366 GO:GO:2000025 Gene3D:4.10.1100.10 SUPFAM:SSF103612
HOGENOM:HOG000070804 ProtClustDB:CLSN2683909 eggNOG:NOG246953
EMBL:AJ011638 EMBL:AJ011639 EMBL:AJ011640 EMBL:AY046007
EMBL:AY150378 EMBL:AJ628864 IPI:IPI00527975 IPI:IPI00607506
PIR:T00929 PIR:T52593 RefSeq:NP_181749.1 UniGene:At.498
ProteinModelPortal:Q700W2 SMR:Q700W2 STRING:Q700W2 PRIDE:Q700W2
EnsemblPlants:AT2G42200.1 GeneID:818820 KEGG:ath:AT2G42200
GeneFarm:4770 TAIR:At2g42200 InParanoid:Q700W2 OMA:LLSNQPW
PhylomeDB:Q700W2 Genevestigator:Q700W2 Uniprot:Q700W2
Length = 375
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 86/167 (51%), Positives = 113/167 (67%)
Query: 115 KAEPTGGSPTLEASVGSGEPLLGLKLGKRMYFEDISAGGNGKNSSFPAVCGSYSTSAKRS 174
+AE +GGS T E+S SG GL G+++YFED GG+G +SS G S R
Sbjct: 15 QAE-SGGSST-ESSSFSG----GLMFGQKIYFED-GGGGSGSSSS-----GGRSNRRVRG 62
Query: 175 RSNPQTTQAALCQVEGCGLDLSSAKDYHRKHRVCENHSKSPKVIVGGLERRFCQQCSRFH 234
+ Q+ Q CQVEGCG+DL++AK Y+ +HRVC HSK+PKV V G+E+RFCQQCSRFH
Sbjct: 63 GGSGQSGQIPRCQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVAGIEQRFCQQCSRFH 122
Query: 235 GLSEFDEKKRSCRRRLSDHNARRRKSQPEAVRLNPAR---LSSSLYD 278
L EFD +KRSCRRRL+ HN RRRK QP ++ + +R ++ SLY+
Sbjct: 123 QLPEFDLEKRSCRRRLAGHNERRRKPQPASLSVLASRYGRIAPSLYE 169
>TAIR|locus:2026428 [details] [associations]
symbol:AT1G69170 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR004333 Pfam:PF03110 PROSITE:PS51141 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC008262 EMBL:AC018364
Gene3D:4.10.1100.10 SUPFAM:SSF103612 EMBL:AJ011643 EMBL:AJ011644
EMBL:AF370612 EMBL:BT006436 EMBL:AK227964 IPI:IPI00543714
PIR:T52592 RefSeq:NP_177077.3 UniGene:At.500
ProteinModelPortal:Q94JW8 SMR:Q94JW8 IntAct:Q94JW8 STRING:Q94JW8
PRIDE:Q94JW8 EnsemblPlants:AT1G69170.1 GeneID:843248
KEGG:ath:AT1G69170 GeneFarm:4767 TAIR:At1g69170 eggNOG:NOG312344
HOGENOM:HOG000154391 InParanoid:Q94JW8 OMA:SSRTYES PhylomeDB:Q94JW8
ProtClustDB:CLSN2918436 Genevestigator:Q94JW8 GermOnline:AT1G69170
Uniprot:Q94JW8
Length = 405
Score = 332 (121.9 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
Identities = 61/93 (65%), Positives = 75/93 (80%)
Query: 167 YSTSAKRSRSNPQTTQAALCQVEGCGLDLSSAKDYHRKHRVCENHSKSPKVIVGGLERRF 226
++ +K+SR++ +Q LCQV GC DLSS+KDYH++HRVCE HSK+ VIV GLE+RF
Sbjct: 105 FALPSKKSRASNLCSQNPLCQVYGCSKDLSSSKDYHKRHRVCEAHSKTSVVIVNGLEQRF 164
Query: 227 CQQCSRFHGLSEFDEKKRSCRRRLSDHNARRRK 259
CQQCSRFH LSEFD+ KRSCRRRL+ HN RRRK
Sbjct: 165 CQQCSRFHFLSEFDDGKRSCRRRLAGHNERRRK 197
Score = 43 (20.2 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 294 HKNPTETFTWEGTCVSKSTQTKGYASKSAKGEGTDV--LLQL 333
H + T+ E +T S S KG+GT LLQL
Sbjct: 335 HSSSTDYHQMEQPLWIDPGKTNSAGSSSCKGKGTSTVDLLQL 376
Score = 41 (19.5 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 12/45 (26%), Positives = 19/45 (42%)
Query: 432 ASSEYRQMGKLSTEFQVHASSFHQDEGNYSQEIQLFRAPYESDFY 476
AS R + LS + Q H S F + +Q Q +D++
Sbjct: 298 ASRSTRALSLLSAQSQQHLSKFPNTTFSITQPNQNLNHSSSTDYH 342
>TAIR|locus:2159717 [details] [associations]
symbol:SPL13A "SQUAMOSA PROMOTER-BINDING PROTEIN LIKE
13A" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0048653 "anther development"
evidence=IMP] InterPro:IPR004333 Pfam:PF03110 PROSITE:PS51141
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048653
EMBL:AB025619 EMBL:AK117475 EMBL:AK317730 EMBL:AY084609
IPI:IPI00537325 RefSeq:NP_568731.1 RefSeq:NP_568740.1
RefSeq:NP_851161.1 UniGene:At.29720 UniGene:At.66677
ProteinModelPortal:B9DI20 SMR:B9DI20 EnsemblPlants:AT5G50570.1
EnsemblPlants:AT5G50570.2 EnsemblPlants:AT5G50670.1 GeneID:835126
GeneID:835138 KEGG:ath:AT5G50570 KEGG:ath:AT5G50670 GeneFarm:4774
TAIR:At5g50570 eggNOG:NOG240434 PhylomeDB:B9DI20
ProtClustDB:CLSN2689975 GermOnline:AT5G50570 Gene3D:4.10.1100.10
SUPFAM:SSF103612 Uniprot:B9DI20
Length = 359
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 103/315 (32%), Positives = 156/315 (49%)
Query: 95 FRLEASDDVLEDFDLKKEFAKAEPT---GGSPTLEASVGSGEPLLGLKLGKRM-YF---E 147
F+L S L FD + + + + + GGS +A S + LG +G F E
Sbjct: 5 FKL--SSGYLSGFDQEPDLSPMDGSISFGGSSQSKADF-SFDLKLGRNIGNSSSVFGDTE 61
Query: 148 DISAGGNGKNSSFPAVCGSYSTSAKRSRSNPQ-TTQAALCQVEGCGLDLSSAKDYHRKHR 206
+ + K+S+ GS S+S+KR+R N T Q +C V+GC D S+ ++YH++H+
Sbjct: 62 QVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHK 121
Query: 207 VCENHSKSPKVIVGGLERRFCQQCSRFHGLSEFDEKKRSCRRRLSDHNARRRKSQPEAVR 266
VC+ HSK+P V + G ++RFCQQCSRFH L EFDE KRSCR+RL HN RRRK QPE +
Sbjct: 122 VCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIG 181
Query: 267 LNPARLSSSLYDGKQQMTLVWNSVPFVHKNPTETF---TWEGTCVSKSTQTKGYASKSAK 323
PA + + G + + S H PT + +W + VS + G S+
Sbjct: 182 -RPANFFTG-FQGSKLLEFSGGS----HVFPTTSVLNPSWGNSLVSVAVAANG----SSY 231
Query: 324 GEGTDVLLQLHGNQPPNS---VPARRDDSNGLLLSKAKVTMAEVLDQGPEESMISFDLGA 380
G+ ++ G+ P + P ++ ++K + E + S+
Sbjct: 232 GQSQSYVV---GSSPAKTGIMFPISSSPNSTRSIAKQFPFLQEE-ESSRTASLCERMTSC 287
Query: 381 TQDCHSALSLLSKTS 395
D ALSLLS +S
Sbjct: 288 IHDSDCALSLLSSSS 302
>TAIR|locus:2832472 [details] [associations]
symbol:SPL13B "SQUAMOSA PROMOTER-BINDING PROTEIN LIKE
13B" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0048653 "anther development" evidence=IMP] InterPro:IPR004333
Pfam:PF03110 PROSITE:PS51141 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0006351 GO:GO:0048653 EMBL:AB023037 IPI:IPI00537325
RefSeq:NP_568731.1 RefSeq:NP_568740.1 RefSeq:NP_851161.1
UniGene:At.29720 UniGene:At.66677 GeneID:835126 GeneID:835138
KEGG:ath:AT5G50570 KEGG:ath:AT5G50670 eggNOG:NOG240434
Gene3D:4.10.1100.10 SUPFAM:SSF103612 ProteinModelPortal:P0DI11
SMR:P0DI11 GeneFarm:4775 TAIR:At5g50670 PhylomeDB:P0DI11
Uniprot:P0DI11
Length = 359
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 103/315 (32%), Positives = 156/315 (49%)
Query: 95 FRLEASDDVLEDFDLKKEFAKAEPT---GGSPTLEASVGSGEPLLGLKLGKRM-YF---E 147
F+L S L FD + + + + + GGS +A S + LG +G F E
Sbjct: 5 FKL--SSGYLSGFDQEPDLSPMDGSISFGGSSQSKADF-SFDLKLGRNIGNSSSVFGDTE 61
Query: 148 DISAGGNGKNSSFPAVCGSYSTSAKRSRSNPQ-TTQAALCQVEGCGLDLSSAKDYHRKHR 206
+ + K+S+ GS S+S+KR+R N T Q +C V+GC D S+ ++YH++H+
Sbjct: 62 QVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHK 121
Query: 207 VCENHSKSPKVIVGGLERRFCQQCSRFHGLSEFDEKKRSCRRRLSDHNARRRKSQPEAVR 266
VC+ HSK+P V + G ++RFCQQCSRFH L EFDE KRSCR+RL HN RRRK QPE +
Sbjct: 122 VCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIG 181
Query: 267 LNPARLSSSLYDGKQQMTLVWNSVPFVHKNPTETF---TWEGTCVSKSTQTKGYASKSAK 323
PA + + G + + S H PT + +W + VS + G S+
Sbjct: 182 -RPANFFTG-FQGSKLLEFSGGS----HVFPTTSVLNPSWGNSLVSVAVAANG----SSY 231
Query: 324 GEGTDVLLQLHGNQPPNS---VPARRDDSNGLLLSKAKVTMAEVLDQGPEESMISFDLGA 380
G+ ++ G+ P + P ++ ++K + E + S+
Sbjct: 232 GQSQSYVV---GSSPAKTGIMFPISSSPNSTRSIAKQFPFLQEE-ESSRTASLCERMTSC 287
Query: 381 TQDCHSALSLLSKTS 395
D ALSLLS +S
Sbjct: 288 IHDSDCALSLLSSSS 302
>TAIR|locus:504956101 [details] [associations]
symbol:SPL8 "squamosa promoter binding protein-like 8"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0009554 "megasporogenesis" evidence=IMP] [GO:0009556
"microsporogenesis" evidence=IMP] [GO:0048653 "anther development"
evidence=IGI] InterPro:IPR004333 Pfam:PF03110 PROSITE:PS51141
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0005737
GO:GO:0030154 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0006351 GO:GO:0048653 GO:GO:0009556 EMBL:U89959 GO:GO:0009554
Gene3D:4.10.1100.10 SUPFAM:SSF103612 EMBL:AJ011641 EMBL:AJ011642
EMBL:AK118174 IPI:IPI00535875 PIR:T52594 RefSeq:NP_683267.1
UniGene:At.499 ProteinModelPortal:Q8GXL3 SMR:Q8GXL3
EnsemblPlants:AT1G02065.1 GeneID:839275 KEGG:ath:AT1G02065
GeneFarm:4769 TAIR:At1g02065 eggNOG:NOG260283 HOGENOM:HOG000131786
InParanoid:Q8GXL3 OMA:CHQSASA PhylomeDB:Q8GXL3
ProtClustDB:CLSN2690376 Genevestigator:Q8GXL3 Uniprot:Q8GXL3
Length = 333
Score = 308 (113.5 bits), Expect = 6.8e-30, Sum P(2) = 6.8e-30
Identities = 66/129 (51%), Positives = 79/129 (61%)
Query: 136 LGLKLGKRMYFEDISAGGNGKNSSFPAVCGSYSTSAKRSRSNPQTTQAALCQVEGCGLDL 195
+GL LG R YF SA + F + S + +N +T CQ EGC DL
Sbjct: 147 IGLNLGGRTYF---SAA----DDDFVSRLYRRSRPGESGMANSLSTPR--CQAEGCNADL 197
Query: 196 SSAKDYHRKHRVCENHSKSPKVIVGGLERRFCQQCSRFHGLSEFDEKKRSCRRRLSDHNA 255
S AK YHR+H+VCE HSK+ V+ GL +RFCQQCSRFH LSEFD KRSCR+RL+DHN
Sbjct: 198 SHAKHYHRRHKVCEFHSKASTVVAAGLSQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNR 257
Query: 256 RRRKSQPEA 264
RRRK A
Sbjct: 258 RRRKCHQSA 266
Score = 38 (18.4 bits), Expect = 6.8e-30, Sum P(2) = 6.8e-30
Identities = 14/75 (18%), Positives = 25/75 (33%)
Query: 384 CHSALSLLSKTSWGICEPKKVSQQHPTSTSLTNIPHAVMPAMAQGSPFASSEYRQMGKLS 443
CH + S T G PK + + ++ P + P F +++ S
Sbjct: 262 CHQSASATQDTGTGKTTPKSPND---SGVKASSSPSSNAPPTISLECFRQRQFQTTASSS 318
Query: 444 TEFQVHASSFHQDEG 458
T ++S G
Sbjct: 319 TSASSSSNSMFFSSG 333
>TAIR|locus:2095793 [details] [associations]
symbol:SPL15 "squamosa promoter binding protein-like 15"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=IGI]
[GO:0008361 "regulation of cell size" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0048653
"anther development" evidence=IGI] [GO:0009827 "plant-type cell
wall modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR004333 Pfam:PF03110 PROSITE:PS51141
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0008361
GO:GO:0042127 GO:GO:0048653 GO:GO:0010228 EMBL:AL132977
Gene3D:4.10.1100.10 SUPFAM:SSF103612 EMBL:AY086384 IPI:IPI00532394
PIR:T46014 RefSeq:NP_191351.1 UniGene:At.34784
ProteinModelPortal:Q9M2Q6 SMR:Q9M2Q6 EnsemblPlants:AT3G57920.1
GeneID:824961 KEGG:ath:AT3G57920 GeneFarm:4777 TAIR:At3g57920
eggNOG:NOG301654 HOGENOM:HOG000070804 InParanoid:Q9M2Q6 OMA:LACHNER
PhylomeDB:Q9M2Q6 ProtClustDB:CLSN2683909 Genevestigator:Q9M2Q6
GermOnline:AT3G57920 Uniprot:Q9M2Q6
Length = 354
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 75/143 (52%), Positives = 92/143 (64%)
Query: 137 GLKLGKRMYFEDISAGGNGKNSSFPAVCGSYSTSAKRSRSNPQTTQAALCQVEGCGLDLS 196
GL+ G+++YFED +G KN +T K S TT A CQVEGC +DLS
Sbjct: 26 GLRFGQKIYFED-GSGSRSKNR--------VNTVRKSS-----TT--ARCQVEGCRMDLS 69
Query: 197 SAKDYHRKHRVCENHSKSPKVIVGGLERRFCQQCSRFHGLSEFDEKKRSCRRRLSDHNAR 256
+ K Y+ +H+VC HSKS KVIV GL +RFCQQCSRFH LSEFD +KRSCRRRL+ HN R
Sbjct: 70 NVKAYYSRHKVCCIHSKSSKVIVSGLHQRFCQQCSRFHQLSEFDLEKRSCRRRLACHNER 129
Query: 257 RRKSQPEAVRLNP--ARLSSSLY 277
RRK QP +R++ SLY
Sbjct: 130 RRKPQPTTALFTSHYSRIAPSLY 152
>TAIR|locus:2101402 [details] [associations]
symbol:SPL12 "squamosa promoter-binding protein-like 12"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] InterPro:IPR002110 InterPro:IPR004333 Pfam:PF03110
PROSITE:PS51141 SMART:SM00248 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403 GO:GO:0003700
GO:GO:0006351 EMBL:AL138658 Gene3D:4.10.1100.10 SUPFAM:SSF103612
EMBL:AJ132096 EMBL:AJ132097 EMBL:BT003817 IPI:IPI00548047
PIR:T47827 RefSeq:NP_191562.1 UniGene:At.502 PDB:1WJ0 PDBsum:1WJ0
ProteinModelPortal:Q9S7P5 SMR:Q9S7P5 PRIDE:Q9S7P5
EnsemblPlants:AT3G60030.1 GeneID:825173 KEGG:ath:AT3G60030
GeneFarm:4773 TAIR:At3g60030 eggNOG:NOG266915 HOGENOM:HOG000082688
InParanoid:Q9S7P5 OMA:RWELLEY PhylomeDB:Q9S7P5
ProtClustDB:CLSN2685028 EvolutionaryTrace:Q9S7P5
Genevestigator:Q9S7P5 GermOnline:AT3G60030 Uniprot:Q9S7P5
Length = 927
Score = 322 (118.4 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 60/119 (50%), Positives = 80/119 (67%)
Query: 181 TQAALCQVEGCGLDLSSAKDYHRKHRVCENHSKSPKVIVGGLERRFCQQCSRFHGLSEFD 240
++A CQV+ CG DLS KDYHR+H+VCE HSK+ +VGG+ +RFCQQCSRFH L EFD
Sbjct: 122 SRAICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD 181
Query: 241 EKKRSCRRRLSDHNARRRKSQPEAVRLNPARLSSSLYDGKQQMTLVWNSVPFVHKNPTE 299
E KRSCRRRL+ HN RRRK+ P+ + N +S +TL+ + +H N ++
Sbjct: 182 EGKRSCRRRLAGHNKRRRKANPDTIG-NGTSMSDDQTSNYMLITLL-KILSNIHSNQSD 238
>TAIR|locus:2057656 [details] [associations]
symbol:SPL3 "squamosa promoter binding protein-like 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0010321 "regulation of vegetative
phase change" evidence=IMP] [GO:0010229 "inflorescence development"
evidence=IMP] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IMP] [GO:0009741 "response to
brassinosteroid stimulus" evidence=RCA] [GO:0009827 "plant-type
cell wall modification" evidence=RCA] [GO:0009860 "pollen tube
growth" evidence=RCA] [GO:0009886 "post-embryonic morphogenesis"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
[GO:0048507 "meristem development" evidence=RCA] [GO:0009908
"flower development" evidence=TAS] [GO:0009911 "positive regulation
of flower development" evidence=IMP] InterPro:IPR004333
Pfam:PF03110 PROSITE:PS51141 GO:GO:0005634 GO:GO:0005737
GO:GO:0030154 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009911
GO:GO:0010228 GO:GO:0009908 EMBL:U78721 GO:GO:0010229
Gene3D:4.10.1100.10 SUPFAM:SSF103612 EMBL:Y09427 EMBL:AJ011627
EMBL:AJ242959 EMBL:AJ011633 EMBL:AK118179 EMBL:BT005443
EMBL:AY084312 IPI:IPI00527505 PIR:H84749 PIR:T52597
RefSeq:NP_565771.1 UniGene:At.25364 ProteinModelPortal:P93015
SMR:P93015 STRING:P93015 EnsemblPlants:AT2G33810.1 GeneID:817948
KEGG:ath:AT2G33810 GeneFarm:4764 TAIR:At2g33810 eggNOG:NOG326033
HOGENOM:HOG000005763 InParanoid:P93015 OMA:ESCTADM PhylomeDB:P93015
ProtClustDB:CLSN2719900 Genevestigator:P93015 GermOnline:AT2G33810
GO:GO:0010321 InterPro:IPR017238 PIRSF:PIRSF037575 Uniprot:P93015
Length = 131
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 52/89 (58%), Positives = 68/89 (76%)
Query: 172 KRSRSNPQTTQAALCQVEGCGLDLSSAKDYHRKHRVCENHSKSPKVIVGGLERRFCQQCS 231
++ + T+ + +CQVE C D+S AK YH++H+VC+ H+K+P V + GL +RFCQQCS
Sbjct: 40 EKKQKGKATSSSGVCQVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFCQQCS 99
Query: 232 RFHGLSEFDEKKRSCRRRLSDHNARRRKS 260
RFH LSEFDE KRSCRRRL+ HN RRRKS
Sbjct: 100 RFHALSEFDEAKRSCRRRLAGHNERRRKS 128
>TAIR|locus:2041329 [details] [associations]
symbol:SPL1 "squamosa promoter binding protein-like 1"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0032880 "regulation of protein
localization" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] InterPro:IPR002110
InterPro:IPR004333 Pfam:PF03110 PROSITE:PS51141 SMART:SM00248
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0003677 Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
GO:GO:0003700 GO:GO:0006351 EMBL:AC004411 Gene3D:4.10.1100.10
SUPFAM:SSF103612 eggNOG:NOG266915 HOGENOM:HOG000082688
ProtClustDB:CLSN2685028 EMBL:AJ011577 EMBL:AJ011628 EMBL:AJ011629
EMBL:AK230269 IPI:IPI00519879 PIR:T02179 PIR:T02180 PIR:T52601
PIR:T52602 RefSeq:NP_850468.1 UniGene:At.12581
ProteinModelPortal:Q9SMX9 SMR:Q9SMX9 STRING:Q9SMX9 PaxDb:Q9SMX9
PRIDE:Q9SMX9 EnsemblPlants:AT2G47070.1 GeneID:819321
KEGG:ath:AT2G47070 GeneFarm:4762 TAIR:At2g47070 InParanoid:Q9SMX9
OMA:RGNDAYL PhylomeDB:Q9SMX9 Genevestigator:Q9SMX9
GermOnline:AT2G47070 Uniprot:Q9SMX9
Length = 881
Score = 320 (117.7 bits), Expect = 2.4e-27, P = 2.4e-27
Identities = 61/100 (61%), Positives = 71/100 (71%)
Query: 179 QTTQAALCQVEGCGLDLSSAKDYHRKHRVCENHSKSPKVIVGGLERRFCQQCSRFHGLSE 238
+T A+CQVE C DLS KDYHR+H+VCE HSK+ VGG+ +RFCQQCSRFH L E
Sbjct: 99 KTKSGAVCQVENCEADLSKVKDYHRRHKVCEMHSKATSATVGGILQRFCQQCSRFHLLQE 158
Query: 239 FDEKKRSCRRRLSDHNARRRKSQPE-AVRLNPARLSSSLY 277
FDE KRSCRRRL+ HN RRRK+ PE NP+ SS Y
Sbjct: 159 FDEGKRSCRRRLAGHNKRRRKTNPEPGANGNPSDDHSSNY 198
>TAIR|locus:2037355 [details] [associations]
symbol:SPL14 "squamosa promoter binding protein-like 14"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA;TAS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0042742 "defense response to bacterium"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR002110 InterPro:IPR004333 Pfam:PF03110 PROSITE:PS50088
PROSITE:PS51141 SMART:SM00248 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0046872 GO:GO:0003677 GO:GO:0042742
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003700 GO:GO:0006351 EMBL:AC007369
Gene3D:4.10.1100.10 SUPFAM:SSF103612 eggNOG:NOG266915
HOGENOM:HOG000082688 EMBL:AJ242957 EMBL:AJ243094 EMBL:AY074499
IPI:IPI00520597 PIR:G86342 PIR:T52569 RefSeq:NP_173522.1
UniGene:At.21192 ProteinModelPortal:Q8RY95 SMR:Q8RY95
EnsemblPlants:AT1G20980.1 GeneID:838692 KEGG:ath:AT1G20980
GeneFarm:4776 TAIR:At1g20980 InParanoid:Q8RY95 OMA:VERDYCA
PhylomeDB:Q8RY95 ProtClustDB:CLSN2679456 Genevestigator:Q8RY95
GermOnline:AT1G20980 Uniprot:Q8RY95
Length = 1035
Score = 308 (113.5 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 60/95 (63%), Positives = 70/95 (73%)
Query: 172 KRSRSNPQTTQAALCQVEGCGLDLSSAKDYHRKHRVCENHSKSPKVIVGGLERRFCQQCS 231
K+ RS +CQV+ C DLS AKDYHR+H+VCE HSK+ K +VG +RFCQQCS
Sbjct: 106 KKVRSGSPGGNYPMCQVDNCTEDLSHAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCS 165
Query: 232 RFHGLSEFDEKKRSCRRRLSDHNARRRKS-QPEAV 265
RFH LSEFDE KRSCRRRL+ HN RRRK+ QPE V
Sbjct: 166 RFHLLSEFDEGKRSCRRRLAGHNRRRRKTTQPEEV 200
Score = 45 (20.9 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 26/108 (24%), Positives = 47/108 (43%)
Query: 372 SMISFDLGATQDCHSALSLLSKTSWGICEPKKVSQQHPTSTSLTNIPHAVMPAMAQGSPF 431
+++S LG++ AL++LS+ +G + +K + TN+ + G
Sbjct: 308 AVLSTTLGSSSP--DALAILSQGGFGNKDSEKTKLSSYENGVTTNLEKRTFGFSSVGGER 365
Query: 432 ASSEYRQMGKLSTEFQVHASSFHQDEGNYSQEIQLFRAPYESDFYPTV 479
+SS + + S S QD + S +QLF + E + PTV
Sbjct: 366 SSSSNQSPSQDS-------DSRGQDTRS-SLSLQLFTSSPEDESRPTV 405
>TAIR|locus:2011706 [details] [associations]
symbol:AT1G76580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] InterPro:IPR002110
InterPro:IPR004333 Pfam:PF03110 PROSITE:PS51141 SMART:SM00248
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 Gene3D:1.25.40.20 InterPro:IPR020683
GO:GO:0003700 GO:GO:0006351 EMBL:AC015450 Gene3D:4.10.1100.10
SUPFAM:SSF103612 HOGENOM:HOG000082688 UniGene:At.21192
ProtClustDB:CLSN2679456 EMBL:AY062670 EMBL:BT006626 EMBL:AJ630503
EMBL:AY568676 EMBL:AJ242958 IPI:IPI00531289 IPI:IPI00607526
PIR:H96793 PIR:T52568 RefSeq:NP_177784.6 UniGene:At.504
ProteinModelPortal:Q700C2 SMR:Q700C2 PaxDb:Q700C2 PRIDE:Q700C2
EnsemblPlants:AT1G76580.1 GeneID:843991 KEGG:ath:AT1G76580
GeneFarm:4778 TAIR:At1g76580 eggNOG:NOG128281 OMA:IANATIC
PhylomeDB:Q700C2 Genevestigator:Q700C2 GermOnline:AT1G76580
Uniprot:Q700C2
Length = 988
Score = 309 (113.8 bits), Expect = 3.9e-25, P = 3.9e-25
Identities = 56/80 (70%), Positives = 65/80 (81%)
Query: 186 CQVEGCGLDLSSAKDYHRKHRVCENHSKSPKVIVGGLERRFCQQCSRFHGLSEFDEKKRS 245
CQV+ C DLS AKDYHR+H+VCE HSK+ K +VG +RFCQQCSRFH LSEFDE KRS
Sbjct: 82 CQVDNCKEDLSIAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSRFHLLSEFDEGKRS 141
Query: 246 CRRRLSDHNARRRKSQPEAV 265
CRRRL HN RRRK+QP+A+
Sbjct: 142 CRRRLDGHNRRRRKTQPDAI 161
>TAIR|locus:2009675 [details] [associations]
symbol:SPL4 "squamosa promoter binding protein-like 4"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010321 "regulation of vegetative
phase change" evidence=IMP] InterPro:IPR004333 Pfam:PF03110
PROSITE:PS51141 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC008007 Gene3D:4.10.1100.10
SUPFAM:SSF103612 HOGENOM:HOG000005763 GO:GO:0010321
InterPro:IPR017238 PIRSF:PIRSF037575 EMBL:AJ011630 EMBL:AJ011631
EMBL:AJ011632 EMBL:BT002856 EMBL:BT004391 EMBL:AY084902
IPI:IPI00539648 PIR:T52599 PIR:T52600 RefSeq:NP_175723.1
RefSeq:NP_974014.1 UniGene:At.496 PDB:1UL4 PDBsum:1UL4
ProteinModelPortal:Q9S7A9 SMR:Q9S7A9 STRING:Q9S7A9
EnsemblPlants:AT1G53160.1 EnsemblPlants:AT1G53160.2 GeneID:841749
KEGG:ath:AT1G53160 GeneFarm:4765 TAIR:At1g53160 eggNOG:NOG268355
InParanoid:Q9S7A9 OMA:ERSRVEM PhylomeDB:Q9S7A9
ProtClustDB:CLSN2679788 EvolutionaryTrace:Q9S7A9
Genevestigator:Q9S7A9 GermOnline:AT1G53160 Uniprot:Q9S7A9
Length = 174
Score = 287 (106.1 bits), Expect = 3.9e-25, P = 3.9e-25
Identities = 51/80 (63%), Positives = 61/80 (76%)
Query: 185 LCQVEGCGLDLSSAKDYHRKHRVCENHSKSPKVIVGGLERRFCQQCSRFHGLSEFDEKKR 244
LCQV+ C D+ AK YHR+H+VCE H+K+ V + GL +RFCQQCSRFH L EFDE KR
Sbjct: 53 LCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKR 112
Query: 245 SCRRRLSDHNARRRKSQPEA 264
SCRRRL+ HN RRRKS E+
Sbjct: 113 SCRRRLAGHNERRRKSSGES 132
>TAIR|locus:2087105 [details] [associations]
symbol:SPL5 "squamosa promoter binding protein-like 5"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010321 "regulation of vegetative
phase change" evidence=IMP] InterPro:IPR004333 Pfam:PF03110
PROSITE:PS51141 GO:GO:0005634 GO:GO:0005737 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AP000413 UniGene:At.28162 UniGene:At.64997
Gene3D:4.10.1100.10 SUPFAM:SSF103612 HOGENOM:HOG000005763
GO:GO:0010321 InterPro:IPR017238 PIRSF:PIRSF037575
ProtClustDB:CLSN2679788 EMBL:AJ011609 EMBL:AJ011610 EMBL:AJ242960
EMBL:AK118611 EMBL:BT003714 IPI:IPI00545460 PIR:T52567 PIR:T52607
RefSeq:NP_188145.1 ProteinModelPortal:Q9S758 SMR:Q9S758
STRING:Q9S758 PRIDE:Q9S758 EnsemblPlants:AT3G15270.1 GeneID:820758
KEGG:ath:AT3G15270 GeneFarm:4766 TAIR:At3g15270 eggNOG:NOG270798
InParanoid:Q9S758 OMA:EEMENGM PhylomeDB:Q9S758
Genevestigator:Q9S758 GermOnline:AT3G15270 Uniprot:Q9S758
Length = 181
Score = 273 (101.2 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 50/84 (59%), Positives = 63/84 (75%)
Query: 178 PQTTQ--AALCQVEGCGLDLSSAKDYHRKHRVCENHSKSPKVIVGGLERRFCQQCSRFHG 235
P T + + LCQV+ C ++L+ AK Y+R+HRVCE H+K+ V G+ +RFCQQCSRFH
Sbjct: 53 PSTDRVPSRLCQVDRCTVNLTEAKQYYRRHRVCEVHAKASAATVAGVRQRFCQQCSRFHE 112
Query: 236 LSEFDEKKRSCRRRLSDHNARRRK 259
L EFDE KRSCRRRL+ HN RRRK
Sbjct: 113 LPEFDEAKRSCRRRLAGHNERRRK 136
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.127 0.379 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 480 436 0.00088 118 3 11 23 0.45 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 625 (66 KB)
Total size of DFA: 295 KB (2151 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.77u 0.09s 38.86t Elapsed: 00:00:03
Total cpu time: 38.77u 0.09s 38.86t Elapsed: 00:00:03
Start: Sat May 11 04:15:25 2013 End: Sat May 11 04:15:28 2013